Query 038818
Match_columns 486
No_of_seqs 258 out of 2717
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 03:38:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038818.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038818hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02590 probable tyrosine dec 100.0 1.9E-92 4.1E-97 718.7 54.6 479 1-485 54-536 (539)
2 PLN02880 tyrosine decarboxylas 100.0 4.9E-88 1.1E-92 687.9 53.8 480 1-486 10-489 (490)
3 KOG0628 Aromatic-L-amino-acid/ 100.0 2.7E-83 5.9E-88 605.1 40.3 463 1-483 1-473 (511)
4 TIGR03799 NOD_PanD_pyr putativ 100.0 7.1E-72 1.5E-76 569.6 47.9 459 5-476 23-520 (522)
5 PF00282 Pyridoxal_deC: Pyrido 100.0 2.8E-73 6.1E-78 561.5 29.6 370 35-409 1-373 (373)
6 KOG0629 Glutamate decarboxylas 100.0 9.6E-73 2.1E-77 527.5 30.9 469 5-482 32-510 (510)
7 TIGR03811 tyr_de_CO2_Ent tyros 100.0 2.6E-67 5.7E-72 539.0 49.4 460 2-483 15-604 (608)
8 COG0076 GadB Glutamate decarbo 100.0 3E-58 6.6E-63 461.2 37.8 441 16-481 3-449 (460)
9 PLN02263 serine decarboxylase 100.0 5.4E-57 1.2E-61 447.3 36.7 358 53-481 75-443 (470)
10 TIGR01788 Glu-decarb-GAD gluta 100.0 3.6E-56 7.8E-61 445.8 38.4 399 43-482 14-430 (431)
11 PLN03032 serine decarboxylase; 100.0 4.4E-50 9.6E-55 393.6 34.5 357 53-478 8-373 (374)
12 PRK02769 histidine decarboxyla 100.0 2E-48 4.3E-53 385.1 36.1 356 53-480 7-371 (380)
13 cd06450 DOPA_deC_like DOPA dec 100.0 4.1E-44 8.9E-49 355.5 35.1 340 76-477 1-344 (345)
14 KOG1383 Glutamate decarboxylas 100.0 3E-36 6.4E-41 287.0 31.7 391 44-485 54-450 (491)
15 PRK13520 L-tyrosine decarboxyl 100.0 2.1E-35 4.6E-40 295.9 35.5 367 51-480 2-370 (371)
16 COG1104 NifS Cysteine sulfinat 100.0 1.2E-35 2.7E-40 283.7 31.6 343 74-484 2-380 (386)
17 TIGR03812 tyr_de_CO2_Arch tyro 100.0 1.5E-34 3.3E-39 290.0 35.8 368 52-478 1-373 (373)
18 COG0520 csdA Selenocysteine ly 100.0 1.8E-34 4E-39 286.6 33.7 352 75-480 24-404 (405)
19 PRK04366 glycine dehydrogenase 100.0 8.2E-32 1.8E-36 276.3 33.7 399 35-484 35-451 (481)
20 TIGR00461 gcvP glycine dehydro 100.0 2.1E-31 4.6E-36 282.4 35.6 385 51-484 466-870 (939)
21 PRK05367 glycine dehydrogenase 100.0 1E-30 2.3E-35 282.3 35.3 399 35-484 459-878 (954)
22 PRK00451 glycine dehydrogenase 100.0 2.4E-29 5.1E-34 257.9 30.8 381 34-479 31-446 (447)
23 TIGR03402 FeS_nifS cysteine de 100.0 3.4E-29 7.5E-34 251.5 30.9 341 76-483 2-374 (379)
24 PRK09295 bifunctional cysteine 100.0 9.3E-29 2E-33 250.5 31.7 352 75-480 25-403 (406)
25 PRK10874 cysteine sulfinate de 100.0 1.4E-28 3.1E-33 248.9 32.8 355 74-482 20-399 (401)
26 TIGR03392 FeS_syn_CsdA cystein 100.0 1E-28 2.2E-33 249.7 31.4 354 75-482 18-396 (398)
27 cd06453 SufS_like Cysteine des 100.0 1E-28 2.2E-33 247.8 30.4 318 104-475 34-373 (373)
28 TIGR01979 sufS cysteine desulf 100.0 2.1E-28 4.5E-33 248.0 31.6 355 75-482 20-402 (403)
29 TIGR01977 am_tr_V_EF2568 cyste 100.0 1.1E-28 2.4E-33 247.7 28.8 311 112-477 43-375 (376)
30 PLN02651 cysteine desulfurase 100.0 1.3E-28 2.9E-33 245.7 28.2 328 76-469 2-364 (364)
31 TIGR02006 IscS cysteine desulf 100.0 1.5E-28 3.3E-33 248.3 27.5 347 74-482 4-378 (402)
32 TIGR03531 selenium_SpcS O-phos 100.0 7.4E-28 1.6E-32 240.2 31.0 307 44-399 28-356 (444)
33 PLN02855 Bifunctional selenocy 100.0 3.6E-27 7.8E-32 240.2 31.9 355 74-482 33-419 (424)
34 cd06451 AGAT_like Alanine-glyo 100.0 1.2E-27 2.6E-32 238.5 27.7 343 78-479 2-355 (356)
35 TIGR03403 nifS_epsilon cystein 100.0 8.5E-27 1.8E-31 234.4 32.1 343 76-483 2-377 (382)
36 PF00266 Aminotran_5: Aminotra 100.0 2.3E-27 5E-32 237.6 26.2 318 103-471 33-371 (371)
37 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 5.1E-26 1.1E-30 228.6 34.8 317 112-482 62-382 (387)
38 cd00613 GDC-P Glycine cleavage 100.0 8.1E-27 1.8E-31 236.0 29.1 370 54-475 2-398 (398)
39 PRK02948 cysteine desulfurase; 100.0 1E-26 2.3E-31 233.7 28.8 342 76-484 3-377 (381)
40 KOG1549 Cysteine desulfurase N 100.0 3.9E-27 8.4E-32 226.1 23.3 350 72-483 42-420 (428)
41 PLN02414 glycine dehydrogenase 100.0 4.3E-26 9.4E-31 245.3 32.4 390 45-483 496-909 (993)
42 TIGR01814 kynureninase kynuren 100.0 3.1E-26 6.8E-31 231.8 29.7 352 74-479 28-405 (406)
43 PLN02409 serine--glyoxylate am 100.0 2.3E-26 5E-31 231.9 27.8 350 77-482 11-373 (401)
44 PRK12566 glycine dehydrogenase 100.0 7.5E-26 1.6E-30 238.7 32.0 402 35-483 460-878 (954)
45 PRK14012 cysteine desulfurase; 100.0 2.8E-26 6.1E-31 232.1 27.1 309 113-482 49-380 (404)
46 TIGR01976 am_tr_V_VC1184 cyste 99.9 1.4E-25 3.1E-30 226.8 29.8 340 75-475 19-397 (397)
47 TIGR02326 transamin_PhnW 2-ami 99.9 1.3E-25 2.9E-30 224.2 28.0 349 77-480 5-361 (363)
48 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 1.3E-24 2.8E-29 216.7 34.1 310 115-479 46-360 (361)
49 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 6.9E-24 1.5E-28 211.9 33.8 311 116-481 54-368 (370)
50 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 3.2E-24 6.9E-29 213.7 29.8 346 79-478 3-354 (355)
51 COG0075 Serine-pyruvate aminot 99.9 2.3E-24 5.1E-29 208.1 26.1 324 106-482 31-364 (383)
52 PRK13479 2-aminoethylphosphona 99.9 6E-24 1.3E-28 212.7 28.6 347 79-482 9-364 (368)
53 TIGR03235 DNA_S_dndA cysteine 99.9 7.7E-24 1.7E-28 210.7 27.4 257 108-409 37-301 (353)
54 PTZ00094 serine hydroxymethylt 99.9 8.7E-24 1.9E-28 216.1 26.1 313 107-481 74-408 (452)
55 PLN02724 Molybdenum cofactor s 99.9 2.6E-23 5.7E-28 225.6 30.2 366 75-478 36-485 (805)
56 PRK07179 hypothetical protein; 99.9 1.3E-22 2.7E-27 205.7 29.6 330 71-482 59-399 (407)
57 COG0156 BioF 7-keto-8-aminopel 99.9 2E-22 4.4E-27 196.7 29.0 337 68-478 41-387 (388)
58 PRK03080 phosphoserine aminotr 99.9 7.7E-23 1.7E-27 204.6 25.6 342 78-483 15-375 (378)
59 TIGR01822 2am3keto_CoA 2-amino 99.9 7.1E-22 1.5E-26 199.6 31.3 301 112-482 82-390 (393)
60 PLN02721 threonine aldolase 99.9 2E-22 4.4E-27 200.6 26.7 306 107-481 38-352 (353)
61 cd06502 TA_like Low-specificit 99.9 1.1E-22 2.3E-27 201.3 23.0 296 114-477 33-337 (338)
62 COG2008 GLY1 Threonine aldolas 99.9 1.3E-22 2.8E-27 190.3 21.2 306 102-479 28-341 (342)
63 cd00609 AAT_like Aspartate ami 99.9 7.8E-22 1.7E-26 195.8 28.3 319 96-477 23-350 (350)
64 cd06454 KBL_like KBL_like; thi 99.9 2.7E-21 5.9E-26 192.2 31.4 336 71-478 6-348 (349)
65 PRK08361 aspartate aminotransf 99.9 1.3E-21 2.7E-26 197.4 28.5 331 87-481 48-390 (391)
66 PRK05367 glycine dehydrogenase 99.9 2.7E-21 5.9E-26 209.5 32.9 364 35-476 43-437 (954)
67 COG0436 Aspartate/tyrosine/aro 99.9 2.2E-21 4.9E-26 193.4 29.4 337 85-482 41-392 (393)
68 PRK13580 serine hydroxymethylt 99.9 8.4E-22 1.8E-26 196.9 25.4 326 105-481 87-445 (493)
69 PRK06108 aspartate aminotransf 99.9 1.9E-21 4E-26 195.8 27.5 326 88-480 40-381 (382)
70 PLN02483 serine palmitoyltrans 99.9 1.5E-20 3.3E-25 193.2 33.5 346 69-482 103-467 (489)
71 PLN02414 glycine dehydrogenase 99.9 1.1E-20 2.4E-25 203.8 33.1 364 35-477 68-465 (993)
72 cd00611 PSAT_like Phosphoserin 99.9 2.8E-22 6E-27 198.9 19.0 337 79-479 3-354 (355)
73 PRK05764 aspartate aminotransf 99.9 1.1E-20 2.4E-25 190.9 30.9 334 88-481 47-391 (393)
74 TIGR01437 selA_rel uncharacter 99.9 6.1E-21 1.3E-25 189.6 28.4 317 86-478 25-362 (363)
75 cd00378 SHMT Serine-glycine hy 99.9 2.4E-21 5.2E-26 196.3 25.7 342 75-480 20-384 (402)
76 PLN02822 serine palmitoyltrans 99.9 8.7E-20 1.9E-24 187.2 36.3 313 112-484 153-480 (481)
77 PRK05937 8-amino-7-oxononanoat 99.9 1.7E-20 3.7E-25 187.5 30.1 337 69-482 7-351 (370)
78 COG1103 Archaea-specific pyrid 99.9 2.3E-20 5E-25 166.3 25.9 303 118-481 66-380 (382)
79 PRK13034 serine hydroxymethylt 99.9 1.7E-20 3.7E-25 189.5 28.3 308 108-480 69-391 (416)
80 COG1168 MalY Bifunctional PLP- 99.9 3E-20 6.5E-25 174.7 27.7 333 87-481 40-386 (388)
81 PRK06939 2-amino-3-ketobutyrat 99.9 8.4E-20 1.8E-24 184.8 33.4 304 110-482 84-394 (397)
82 cd00616 AHBA_syn 3-amino-5-hyd 99.9 1.2E-20 2.7E-25 187.6 26.6 307 106-476 15-352 (352)
83 PRK05355 3-phosphoserine/phosp 99.9 3.6E-21 7.7E-26 190.6 21.4 336 79-480 7-357 (360)
84 PLN03226 serine hydroxymethylt 99.9 1.9E-20 4.2E-25 190.7 26.8 324 107-481 74-419 (475)
85 cd00615 Orn_deC_like Ornithine 99.9 3E-21 6.5E-26 186.6 19.4 229 115-389 61-294 (294)
86 TIGR01821 5aminolev_synth 5-am 99.9 6.5E-20 1.4E-24 185.6 30.0 340 70-482 49-397 (402)
87 PLN02955 8-amino-7-oxononanoat 99.9 1.3E-19 2.7E-24 181.2 31.0 307 112-482 146-462 (476)
88 PRK00011 glyA serine hydroxyme 99.9 1.9E-20 4E-25 190.5 25.7 306 109-480 67-388 (416)
89 PRK06207 aspartate aminotransf 99.9 2.5E-19 5.4E-24 181.2 33.0 316 103-482 72-403 (405)
90 PTZ00377 alanine aminotransfer 99.9 5.1E-19 1.1E-23 182.7 35.0 338 102-485 108-479 (481)
91 PRK13392 5-aminolevulinate syn 99.9 1.4E-19 3.1E-24 183.6 30.4 296 116-482 94-398 (410)
92 KOG1368 Threonine aldolase [Am 99.9 8.6E-21 1.9E-25 171.2 18.4 306 102-477 49-364 (384)
93 PRK07324 transaminase; Validat 99.9 1.3E-19 2.9E-24 181.2 29.0 314 96-481 49-370 (373)
94 COG1003 GcvP Glycine cleavage 99.9 9.4E-20 2E-24 173.0 26.0 384 46-483 40-449 (496)
95 PF02347 GDC-P: Glycine cleava 99.9 1.2E-19 2.5E-24 178.2 27.4 368 34-475 31-429 (429)
96 PTZ00433 tyrosine aminotransfe 99.9 5.9E-19 1.3E-23 179.0 33.1 342 86-483 51-410 (412)
97 PRK06225 aspartate aminotransf 99.9 1.6E-19 3.6E-24 181.3 28.7 300 116-484 69-379 (380)
98 PRK05958 8-amino-7-oxononanoat 99.9 2.7E-19 5.9E-24 180.3 30.2 294 112-478 83-384 (385)
99 PLN02656 tyrosine transaminase 99.9 6.1E-19 1.3E-23 178.6 32.6 338 87-483 50-405 (409)
100 PRK09064 5-aminolevulinate syn 99.9 3.9E-19 8.5E-24 180.3 31.1 299 113-482 91-398 (407)
101 PF01276 OKR_DC_1: Orn/Lys/Arg 99.9 4.6E-21 9.9E-26 188.4 16.2 288 56-399 3-329 (417)
102 TIGR01364 serC_1 phosphoserine 99.9 3E-20 6.5E-25 183.1 22.1 308 108-481 32-348 (349)
103 PRK07682 hypothetical protein; 99.9 1.6E-19 3.5E-24 181.3 27.6 326 91-481 39-376 (378)
104 KOG2862 Alanine-glyoxylate ami 99.9 2.2E-19 4.9E-24 163.2 25.2 345 78-481 20-382 (385)
105 PLN03227 serine palmitoyltrans 99.9 1.3E-18 2.8E-23 174.6 33.5 308 115-483 45-384 (392)
106 PLN00145 tyrosine/nicotianamin 99.9 4E-19 8.7E-24 180.6 29.8 338 90-483 74-426 (430)
107 TIGR01366 serC_3 phosphoserine 99.9 4.1E-20 9E-25 183.4 22.0 310 106-482 34-361 (361)
108 PRK05957 aspartate aminotransf 99.9 8E-19 1.7E-23 176.7 31.2 333 87-483 42-387 (389)
109 PRK07681 aspartate aminotransf 99.9 7.5E-19 1.6E-23 177.6 30.6 326 87-478 47-385 (399)
110 COG0399 WecE Predicted pyridox 99.9 2.8E-19 6.1E-24 173.4 26.0 333 91-481 18-373 (374)
111 PLN00175 aminotransferase fami 99.9 5.4E-19 1.2E-23 178.9 29.1 329 87-480 69-412 (413)
112 PLN02231 alanine transaminase 99.9 3.6E-18 7.8E-23 176.8 35.3 336 102-485 161-531 (534)
113 PRK13393 5-aminolevulinate syn 99.9 1.4E-18 3E-23 176.0 31.3 340 70-482 49-397 (406)
114 PLN02187 rooty/superroot1 99.9 1.8E-18 3.9E-23 177.0 32.4 339 90-484 88-441 (462)
115 PRK15029 arginine decarboxylas 99.8 6.2E-19 1.3E-23 185.5 29.5 234 56-314 142-402 (755)
116 PLN00143 tyrosine/nicotianamin 99.8 3.5E-18 7.5E-23 173.0 34.0 347 86-485 50-408 (409)
117 TIGR01141 hisC histidinol-phos 99.8 4.9E-19 1.1E-23 175.7 27.4 284 117-476 58-346 (346)
118 TIGR00461 gcvP glycine dehydro 99.8 1.6E-18 3.4E-23 184.9 31.7 364 35-476 31-426 (939)
119 PRK06290 aspartate aminotransf 99.8 1.8E-18 3.8E-23 174.8 30.8 317 109-482 81-406 (410)
120 TIGR01265 tyr_nico_aTase tyros 99.8 3.5E-18 7.5E-23 172.9 32.8 341 88-481 51-401 (403)
121 TIGR01825 gly_Cac_T_rel pyrido 99.8 3.3E-18 7.1E-23 172.4 32.3 306 105-482 70-382 (385)
122 PRK08912 hypothetical protein; 99.8 1.6E-18 3.6E-23 174.5 29.6 315 103-480 57-385 (387)
123 PRK08960 hypothetical protein; 99.8 1.2E-18 2.5E-23 175.5 28.3 326 87-479 47-385 (387)
124 PRK07777 aminotransferase; Val 99.8 1.4E-18 3.1E-23 175.0 28.6 325 92-479 44-384 (387)
125 PRK13355 bifunctional HTH-doma 99.8 1.4E-18 3.1E-23 180.8 29.4 334 89-481 166-514 (517)
126 PRK13238 tnaA tryptophanase/L- 99.8 2.9E-18 6.3E-23 174.4 30.9 335 90-480 59-432 (460)
127 PRK11658 UDP-4-amino-4-deoxy-L 99.8 9.8E-19 2.1E-23 175.0 26.9 318 107-479 31-377 (379)
128 PLN02376 1-aminocyclopropane-1 99.8 3.2E-18 7E-23 176.1 31.2 322 105-481 90-438 (496)
129 PRK08363 alanine aminotransfer 99.8 3.3E-18 7.1E-23 172.9 30.5 334 88-482 49-395 (398)
130 PF00155 Aminotran_1_2: Aminot 99.8 4.8E-19 1E-23 177.0 24.1 318 102-475 37-363 (363)
131 PRK05968 hypothetical protein; 99.8 1.3E-18 2.9E-23 174.2 26.5 227 117-410 67-311 (389)
132 PRK07309 aromatic amino acid a 99.8 6.7E-18 1.4E-22 170.2 31.7 333 89-482 47-389 (391)
133 TIGR00858 bioF 8-amino-7-oxono 99.8 3.1E-18 6.7E-23 170.9 29.0 292 113-476 61-360 (360)
134 PRK12414 putative aminotransfe 99.8 4.6E-18 9.9E-23 170.9 30.3 326 88-477 45-383 (384)
135 PRK07568 aspartate aminotransf 99.8 9.2E-18 2E-22 169.8 32.4 332 87-483 45-394 (397)
136 cd00614 CGS_like CGS_like: Cys 99.8 6E-19 1.3E-23 176.1 23.1 285 107-479 38-368 (369)
137 PRK05942 aspartate aminotransf 99.8 8E-18 1.7E-22 169.9 31.3 309 103-476 67-387 (394)
138 PRK09082 methionine aminotrans 99.8 1.8E-18 3.8E-23 174.1 26.2 325 89-477 47-385 (386)
139 PRK06107 aspartate aminotransf 99.8 4E-18 8.6E-23 172.5 28.9 339 89-482 50-401 (402)
140 TIGR03588 PseC UDP-4-keto-6-de 99.8 3.1E-18 6.7E-23 172.0 27.9 322 106-478 26-379 (380)
141 PRK07550 hypothetical protein; 99.8 9.2E-18 2E-22 169.0 31.4 329 87-478 44-384 (386)
142 TIGR01264 tyr_amTase_E tyrosin 99.8 8.3E-18 1.8E-22 170.2 31.2 340 87-482 50-400 (401)
143 TIGR03537 DapC succinyldiamino 99.8 5.5E-18 1.2E-22 168.3 29.2 322 90-477 18-349 (350)
144 TIGR03540 DapC_direct LL-diami 99.8 9.3E-18 2E-22 168.9 30.8 325 88-477 45-382 (383)
145 COG0403 GcvP Glycine cleavage 99.8 5.3E-18 1.1E-22 161.5 26.6 360 49-478 55-447 (450)
146 PRK07337 aminotransferase; Val 99.8 1.1E-17 2.3E-22 168.7 29.8 327 89-478 47-386 (388)
147 PRK06348 aspartate aminotransf 99.8 8.6E-18 1.9E-22 169.0 29.1 326 87-478 45-382 (384)
148 PRK08056 threonine-phosphate d 99.8 1.1E-17 2.3E-22 166.6 29.2 290 116-480 58-354 (356)
149 PLN02450 1-aminocyclopropane-1 99.8 1.2E-17 2.5E-22 171.4 30.2 327 105-483 82-432 (468)
150 PRK09265 aminotransferase AlaT 99.8 1.1E-17 2.3E-22 169.5 29.5 318 103-481 66-401 (404)
151 PRK08068 transaminase; Reviewe 99.8 1.3E-17 2.8E-22 168.1 29.5 322 90-477 50-385 (389)
152 PRK06767 methionine gamma-lyas 99.8 3.4E-18 7.3E-23 171.4 25.0 287 107-481 59-385 (386)
153 PRK08861 cystathionine gamma-s 99.8 3.7E-18 7.9E-23 169.9 24.9 289 107-483 51-385 (388)
154 PLN02271 serine hydroxymethylt 99.8 4.2E-18 9.1E-23 170.9 25.0 326 106-480 187-539 (586)
155 PRK08134 O-acetylhomoserine am 99.8 7.6E-18 1.6E-22 170.1 27.2 240 107-395 62-318 (433)
156 TIGR01328 met_gam_lyase methio 99.8 6E-18 1.3E-22 169.5 26.0 290 107-482 57-391 (391)
157 PRK14807 histidinol-phosphate 99.8 4.2E-17 9E-22 162.0 31.8 284 117-478 63-349 (351)
158 PRK08133 O-succinylhomoserine 99.8 1.3E-17 2.8E-22 167.2 27.9 229 116-410 64-314 (390)
159 PRK15400 lysine decarboxylase 99.8 8E-18 1.7E-22 175.2 26.9 368 56-480 132-558 (714)
160 PRK15399 lysine decarboxylase 99.8 3.7E-17 8.1E-22 170.2 31.3 368 56-480 132-558 (713)
161 PRK05387 histidinol-phosphate 99.8 2.9E-17 6.2E-22 163.5 29.6 286 117-480 64-352 (353)
162 TIGR01329 cysta_beta_ly_E cyst 99.8 7.5E-18 1.6E-22 168.2 24.8 282 115-482 49-376 (378)
163 PRK08636 aspartate aminotransf 99.8 7.6E-17 1.6E-21 163.2 32.4 340 87-481 49-400 (403)
164 PRK07504 O-succinylhomoserine 99.8 1.4E-17 3E-22 167.3 26.6 234 108-410 64-319 (398)
165 PRK06855 aminotransferase; Val 99.8 4.9E-17 1.1E-21 165.7 30.9 354 86-484 49-432 (433)
166 PRK05613 O-acetylhomoserine am 99.8 1.4E-17 2.9E-22 168.1 26.4 237 115-395 71-327 (437)
167 PRK10534 L-threonine aldolase; 99.8 6.3E-18 1.4E-22 166.8 23.6 297 103-480 28-332 (333)
168 PRK07683 aminotransferase A; V 99.8 3.5E-17 7.5E-22 164.8 29.1 331 88-483 44-385 (387)
169 PLN02509 cystathionine beta-ly 99.8 8.8E-18 1.9E-22 170.0 24.7 216 113-395 133-354 (464)
170 PRK00950 histidinol-phosphate 99.8 1.4E-17 3E-22 166.3 26.0 284 116-479 72-360 (361)
171 PRK01688 histidinol-phosphate 99.8 4.4E-18 9.5E-23 168.9 22.1 284 116-476 60-351 (351)
172 PLN02607 1-aminocyclopropane-1 99.8 2.1E-17 4.5E-22 168.3 27.5 320 110-482 96-438 (447)
173 PRK08776 cystathionine gamma-s 99.8 2.8E-17 6.1E-22 165.0 28.1 229 116-410 63-314 (405)
174 PRK06836 aspartate aminotransf 99.8 5.2E-17 1.1E-21 163.8 30.1 330 87-481 48-391 (394)
175 PRK07366 succinyldiaminopimela 99.8 3.8E-17 8.2E-22 164.7 28.5 327 89-478 47-387 (388)
176 PRK09147 succinyldiaminopimela 99.8 4.1E-17 9E-22 164.8 28.9 328 87-479 44-394 (396)
177 PRK08114 cystathionine beta-ly 99.8 2.5E-17 5.3E-22 163.3 26.5 233 107-410 60-317 (395)
178 PRK06358 threonine-phosphate d 99.8 8.7E-17 1.9E-21 159.8 30.4 287 117-479 58-353 (354)
179 KOG0259 Tyrosine aminotransfer 99.8 1.3E-16 2.8E-21 149.2 29.1 379 52-483 43-435 (447)
180 TIGR01324 cysta_beta_ly_B cyst 99.8 9.5E-18 2.1E-22 166.8 23.3 287 107-481 48-376 (377)
181 PRK09276 LL-diaminopimelate am 99.8 6.6E-17 1.4E-21 162.8 29.5 325 88-477 47-384 (385)
182 PRK07050 cystathionine beta-ly 99.8 3.6E-17 7.9E-22 163.9 27.1 285 117-483 69-393 (394)
183 TIGR03576 pyridox_MJ0158 pyrid 99.8 4.6E-17 9.9E-22 160.3 27.3 331 53-478 7-344 (346)
184 cd00617 Tnase_like Tryptophana 99.8 3.6E-17 7.8E-22 164.2 26.5 324 102-481 46-408 (431)
185 PRK07812 O-acetylhomoserine am 99.8 3.7E-17 8.1E-22 164.9 26.6 310 108-484 68-434 (436)
186 PRK07811 cystathionine gamma-s 99.8 3.4E-17 7.4E-22 164.0 26.0 233 108-410 60-315 (388)
187 PRK08249 cystathionine gamma-s 99.8 4.1E-17 8.9E-22 163.6 26.5 289 107-483 62-395 (398)
188 PRK04870 histidinol-phosphate 99.8 7.8E-17 1.7E-21 160.5 28.4 311 87-478 41-355 (356)
189 PRK02731 histidinol-phosphate 99.8 6.2E-17 1.4E-21 162.0 27.6 289 117-480 71-365 (367)
190 PRK08574 cystathionine gamma-s 99.8 1.8E-17 4E-22 165.5 23.4 217 107-394 51-273 (385)
191 KOG1359 Glycine C-acetyltransf 99.8 5.5E-17 1.2E-21 146.4 23.8 297 111-482 110-413 (417)
192 PRK08248 O-acetylhomoserine am 99.8 2.1E-17 4.6E-22 167.0 23.9 306 107-482 62-428 (431)
193 PF01041 DegT_DnrJ_EryC1: DegT 99.8 4.4E-17 9.6E-22 162.3 25.9 304 108-476 24-363 (363)
194 PRK09028 cystathionine beta-ly 99.8 7.7E-17 1.7E-21 160.3 27.4 231 108-409 60-313 (394)
195 PRK15481 transcriptional regul 99.8 1.1E-16 2.4E-21 163.4 29.2 303 104-480 116-430 (431)
196 PRK08064 cystathionine beta-ly 99.8 3.9E-17 8.4E-22 163.7 25.1 212 116-394 57-274 (390)
197 PRK06234 methionine gamma-lyas 99.8 8.5E-17 1.8E-21 161.8 27.2 292 104-482 57-398 (400)
198 PRK04635 histidinol-phosphate 99.8 3.2E-17 6.9E-22 163.0 24.0 283 117-478 64-352 (354)
199 PLN02242 methionine gamma-lyas 99.8 1.3E-16 2.9E-21 160.6 28.5 223 108-398 75-304 (418)
200 PRK13578 ornithine decarboxyla 99.8 1.8E-16 3.9E-21 165.3 30.1 292 56-398 111-447 (720)
201 PRK08045 cystathionine gamma-s 99.8 5.4E-17 1.2E-21 162.1 25.2 286 117-483 56-384 (386)
202 PLN03026 histidinol-phosphate 99.8 1.2E-16 2.6E-21 160.2 27.3 288 117-478 90-379 (380)
203 PRK05166 histidinol-phosphate 99.8 9.7E-17 2.1E-21 160.6 26.5 288 117-479 75-369 (371)
204 PRK03317 histidinol-phosphate 99.8 3E-16 6.5E-21 157.0 30.1 295 109-481 65-364 (368)
205 PRK03158 histidinol-phosphate 99.8 1.5E-16 3.3E-21 158.6 27.9 285 117-478 68-358 (359)
206 PRK09148 aminotransferase; Val 99.8 3.4E-16 7.5E-21 158.4 30.7 319 103-483 62-392 (405)
207 PRK07810 O-succinylhomoserine 99.8 1E-16 2.2E-21 161.0 26.5 234 107-410 68-324 (403)
208 PRK05994 O-acetylhomoserine am 99.8 1.2E-16 2.6E-21 161.8 27.0 237 108-395 62-317 (427)
209 PRK08247 cystathionine gamma-s 99.8 6E-17 1.3E-21 161.3 24.2 226 117-409 56-288 (366)
210 KOG1360 5-aminolevulinate synt 99.8 1.5E-16 3.2E-21 149.3 24.8 298 111-482 218-525 (570)
211 cd00610 OAT_like Acetyl ornith 99.8 2E-16 4.4E-21 160.9 28.5 316 111-478 77-412 (413)
212 PRK06084 O-acetylhomoserine am 99.8 1.4E-16 3.1E-21 160.8 26.9 302 117-481 62-422 (425)
213 PRK07503 methionine gamma-lyas 99.8 1.7E-16 3.7E-21 159.7 27.3 220 108-396 64-289 (403)
214 PLN02452 phosphoserine transam 99.8 1.2E-16 2.5E-21 157.6 25.3 340 75-481 7-363 (365)
215 TIGR01325 O_suc_HS_sulf O-succ 99.8 1.5E-16 3.3E-21 159.1 26.5 227 116-409 57-306 (380)
216 PRK03244 argD acetylornithine 99.8 5.5E-16 1.2E-20 156.8 30.7 291 116-483 88-396 (398)
217 TIGR01365 serC_2 phosphoserine 99.8 2.6E-17 5.6E-22 162.2 20.3 337 86-479 15-371 (374)
218 TIGR02379 ECA_wecE TDP-4-keto- 99.8 1.4E-16 3.1E-21 158.7 25.9 313 108-479 30-375 (376)
219 PRK07269 cystathionine gamma-s 99.8 5.2E-17 1.1E-21 160.9 22.2 234 107-409 52-288 (364)
220 PRK15407 lipopolysaccharide bi 99.8 4.3E-16 9.3E-21 158.0 29.1 328 107-480 61-435 (438)
221 PRK06176 cystathionine gamma-s 99.8 9E-17 2E-21 160.3 23.8 285 107-481 48-378 (380)
222 COG0112 GlyA Glycine/serine hy 99.8 2.3E-16 5E-21 149.2 25.0 313 104-481 63-390 (413)
223 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 1.9E-16 4.1E-21 158.5 26.2 310 115-479 33-374 (375)
224 TIGR03538 DapC_gpp succinyldia 99.8 7.1E-16 1.5E-20 155.7 30.4 325 87-478 43-392 (393)
225 PRK07908 hypothetical protein; 99.8 3.3E-16 7.2E-21 155.5 27.5 305 85-480 35-346 (349)
226 PRK08175 aminotransferase; Val 99.8 1.2E-15 2.6E-20 154.1 31.5 318 102-481 60-389 (395)
227 PRK09105 putative aminotransfe 99.8 6.4E-16 1.4E-20 154.3 29.1 281 117-479 82-368 (370)
228 PRK07671 cystathionine beta-ly 99.8 2E-16 4.4E-21 157.7 25.3 215 115-396 52-272 (377)
229 TIGR02080 O_succ_thio_ly O-suc 99.8 1.9E-16 4.2E-21 158.0 25.1 231 117-410 55-305 (382)
230 TIGR01140 L_thr_O3P_dcar L-thr 99.8 2.2E-16 4.9E-21 155.4 25.1 273 116-475 50-329 (330)
231 PF00464 SHMT: Serine hydroxym 99.8 1.6E-16 3.5E-21 155.7 23.5 336 76-474 22-398 (399)
232 PRK05939 hypothetical protein; 99.8 1.1E-16 2.4E-21 160.3 22.1 239 107-395 45-289 (397)
233 PRK04781 histidinol-phosphate 99.7 1.5E-15 3.2E-20 151.6 29.5 291 116-479 62-361 (364)
234 KOG0257 Kynurenine aminotransf 99.7 9.1E-17 2E-21 152.9 19.3 369 55-476 18-414 (420)
235 PRK06460 hypothetical protein; 99.7 5.5E-16 1.2E-20 154.6 25.7 281 117-482 49-375 (376)
236 cd01494 AAT_I Aspartate aminot 99.7 2.1E-17 4.6E-22 146.1 13.9 166 117-312 4-170 (170)
237 PRK08153 histidinol-phosphate 99.7 1E-15 2.2E-20 153.1 27.6 293 117-483 71-367 (369)
238 PRK00854 rocD ornithine--oxo-a 99.7 2.8E-15 6E-20 151.8 31.1 299 115-480 85-400 (401)
239 PRK02610 histidinol-phosphate 99.7 2E-15 4.4E-20 151.2 29.3 319 89-482 45-372 (374)
240 PRK03321 putative aminotransfe 99.7 9E-16 2E-20 152.7 25.6 284 117-480 61-350 (352)
241 PLN02672 methionine S-methyltr 99.7 1.9E-15 4.1E-20 163.9 29.9 321 112-481 733-1080(1082)
242 PLN02368 alanine transaminase 99.7 1.6E-15 3.4E-20 152.5 27.4 280 86-406 82-392 (407)
243 PRK06425 histidinol-phosphate 99.7 1.9E-15 4.1E-20 148.9 27.3 280 116-479 43-331 (332)
244 PRK05967 cystathionine beta-ly 99.7 6E-16 1.3E-20 153.6 23.8 294 109-483 60-393 (395)
245 PRK07505 hypothetical protein; 99.7 2.9E-15 6.2E-20 151.6 29.1 301 111-481 89-399 (402)
246 PRK01533 histidinol-phosphate 99.7 1.4E-15 3E-20 151.6 26.4 283 118-484 69-358 (366)
247 TIGR03246 arg_catab_astC succi 99.7 5.1E-15 1.1E-19 149.3 30.8 303 114-482 78-396 (397)
248 PRK04073 rocD ornithine--oxo-a 99.7 4.7E-15 1E-19 149.7 30.4 297 114-479 83-395 (396)
249 PF01212 Beta_elim_lyase: Beta 99.7 1.5E-17 3.2E-22 158.5 11.4 253 98-403 18-282 (290)
250 PRK07582 cystathionine gamma-l 99.7 8.2E-16 1.8E-20 152.9 23.9 229 107-409 49-300 (366)
251 PRK06702 O-acetylhomoserine am 99.7 2.8E-15 6E-20 150.5 27.6 242 107-396 59-316 (432)
252 TIGR02618 tyr_phenol_ly tyrosi 99.7 1.4E-14 3E-19 143.2 31.8 350 75-481 39-426 (450)
253 PRK04311 selenocysteine syntha 99.7 4.9E-15 1.1E-19 150.0 28.9 290 117-480 131-463 (464)
254 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 1.5E-15 3.2E-20 153.8 24.6 234 116-396 60-311 (418)
255 PRK07590 L,L-diaminopimelate a 99.7 5.3E-15 1.1E-19 150.0 28.5 325 88-478 50-408 (409)
256 COG1167 ARO8 Transcriptional r 99.7 1.1E-14 2.4E-19 148.7 30.9 321 102-484 125-458 (459)
257 PTZ00125 ornithine aminotransf 99.7 2.8E-14 6.1E-19 144.5 33.8 306 113-482 73-396 (400)
258 PRK12566 glycine dehydrogenase 99.7 2.6E-15 5.7E-20 159.5 26.9 362 35-476 46-439 (954)
259 PRK06434 cystathionine gamma-l 99.7 2E-15 4.4E-20 149.9 24.7 230 107-409 62-308 (384)
260 TIGR00474 selA seryl-tRNA(sec) 99.7 2.1E-14 4.6E-19 145.1 31.6 162 116-314 125-303 (454)
261 TIGR01885 Orn_aminotrans ornit 99.7 3.9E-14 8.4E-19 143.3 33.1 305 113-479 79-400 (401)
262 PRK13237 tyrosine phenol-lyase 99.7 1.7E-14 3.7E-19 143.0 29.3 350 75-481 46-433 (460)
263 COG3844 Kynureninase [Amino ac 99.7 3.2E-15 6.9E-20 137.3 22.2 315 109-483 72-404 (407)
264 KOG0256 1-aminocyclopropane-1- 99.7 7.5E-15 1.6E-19 138.8 25.2 323 108-481 120-461 (471)
265 PRK07865 N-succinyldiaminopime 99.7 9.2E-15 2E-19 146.0 27.7 308 88-476 43-363 (364)
266 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 5.4E-15 1.2E-19 146.4 25.1 287 107-480 53-386 (386)
267 PTZ00376 aspartate aminotransf 99.7 1.3E-14 2.9E-19 146.8 27.9 328 88-481 50-403 (404)
268 COG2873 MET17 O-acetylhomoseri 99.7 1.5E-14 3.3E-19 135.4 24.9 309 107-481 60-425 (426)
269 TIGR03539 DapC_actino succinyl 99.7 3.4E-14 7.3E-19 141.5 29.2 293 104-475 51-356 (357)
270 PRK14809 histidinol-phosphate 99.7 4.2E-14 9.1E-19 140.9 29.8 282 117-480 69-356 (357)
271 KOG1357 Serine palmitoyltransf 99.7 1.3E-15 2.9E-20 145.4 17.7 342 71-482 141-503 (519)
272 PLN02624 ornithine-delta-amino 99.7 1.3E-13 2.8E-18 141.6 33.3 309 113-481 117-444 (474)
273 PRK09440 avtA valine--pyruvate 99.7 2.6E-14 5.6E-19 145.5 27.6 342 87-486 47-416 (416)
274 PRK09257 aromatic amino acid a 99.7 2.7E-14 5.8E-19 144.3 27.5 324 88-478 47-395 (396)
275 PRK07392 threonine-phosphate d 99.7 7.5E-14 1.6E-18 139.2 30.4 287 117-479 61-357 (360)
276 PRK02936 argD acetylornithine 99.7 4.1E-14 9E-19 142.1 28.2 291 111-478 69-376 (377)
277 PRK09275 aspartate aminotransf 99.7 3.1E-14 6.8E-19 145.7 27.5 368 85-483 113-519 (527)
278 PRK05839 hypothetical protein; 99.7 6.1E-14 1.3E-18 140.5 29.2 316 88-480 40-373 (374)
279 PRK08637 hypothetical protein; 99.7 6.3E-14 1.4E-18 141.1 29.3 337 85-482 20-387 (388)
280 PRK12462 phosphoserine aminotr 99.7 1.2E-14 2.6E-19 141.7 22.8 338 76-481 5-362 (364)
281 TIGR00707 argD acetylornithine 99.7 7.1E-14 1.5E-18 140.6 29.1 300 113-478 69-378 (379)
282 PRK05093 argD bifunctional N-s 99.7 1.9E-13 4.2E-18 138.3 32.1 298 116-483 85-402 (403)
283 COG0079 HisC Histidinol-phosph 99.7 7.7E-14 1.7E-18 137.0 28.1 286 117-481 61-354 (356)
284 PRK01278 argD acetylornithine 99.7 1E-13 2.2E-18 139.8 29.0 300 115-482 75-389 (389)
285 PRK03715 argD acetylornithine 99.7 8.3E-14 1.8E-18 139.9 27.9 307 111-482 76-394 (395)
286 PRK02627 acetylornithine amino 99.6 1.4E-13 3.1E-18 139.1 28.9 303 112-482 80-395 (396)
287 COG0001 HemL Glutamate-1-semia 99.6 1.6E-13 3.4E-18 133.4 27.3 316 111-484 91-431 (432)
288 PRK05964 adenosylmethionine--8 99.6 4.2E-13 9.1E-18 136.4 32.0 317 112-482 84-423 (423)
289 TIGR03801 asp_4_decarbox aspar 99.6 1.3E-13 2.8E-18 141.0 28.1 366 86-483 108-518 (521)
290 PRK03967 histidinol-phosphate 99.6 2E-13 4.3E-18 134.8 28.5 273 117-480 59-333 (337)
291 PRK14808 histidinol-phosphate 99.6 2E-13 4.4E-18 134.5 27.6 277 109-478 56-334 (335)
292 PRK12381 bifunctional succinyl 99.6 2.5E-13 5.4E-18 137.4 29.0 303 115-484 83-402 (406)
293 PRK07049 methionine gamma-lyas 99.6 2.3E-13 4.9E-18 137.8 27.2 223 108-395 82-316 (427)
294 PRK11522 putrescine--2-oxoglut 99.6 1.3E-12 2.9E-17 133.1 32.2 313 112-483 123-453 (459)
295 PRK09264 diaminobutyrate--2-ox 99.6 1.7E-12 3.8E-17 131.8 32.2 317 112-484 81-419 (425)
296 PF05889 SLA_LP_auto_ag: Solub 99.6 1.8E-13 3.8E-18 131.6 23.2 317 111-480 54-389 (389)
297 TIGR03542 DAPAT_plant LL-diami 99.6 5.6E-13 1.2E-17 134.9 28.1 310 104-478 70-401 (402)
298 COG4992 ArgD Ornithine/acetylo 99.6 5.9E-13 1.3E-17 128.1 25.6 301 113-484 84-401 (404)
299 PRK08117 4-aminobutyrate amino 99.6 4.8E-12 1.1E-16 129.1 33.8 316 112-484 85-432 (433)
300 PLN02397 aspartate transaminas 99.6 1.5E-12 3.3E-17 132.3 29.9 322 89-480 70-420 (423)
301 PRK08354 putative aminotransfe 99.6 5.7E-13 1.2E-17 130.1 25.3 149 117-311 44-196 (311)
302 PRK06959 putative threonine-ph 99.6 8.5E-13 1.8E-17 130.2 26.6 278 116-486 56-338 (339)
303 PRK04260 acetylornithine amino 99.6 1.4E-12 3E-17 130.8 28.5 278 139-478 86-374 (375)
304 COG0626 MetC Cystathionine bet 99.6 7.7E-13 1.7E-17 129.5 25.1 288 107-482 61-395 (396)
305 PLN02760 4-aminobutyrate:pyruv 99.6 4.4E-12 9.4E-17 130.6 31.5 332 112-482 132-492 (504)
306 TIGR03372 putres_am_tran putre 99.6 1E-11 2.2E-16 125.7 33.2 303 112-478 116-441 (442)
307 KOG2040 Glycine dehydrogenase 99.6 1E-12 2.2E-17 130.4 24.7 329 106-483 575-920 (1001)
308 PRK05664 threonine-phosphate d 99.6 2.2E-12 4.7E-17 127.0 26.5 269 117-481 53-328 (330)
309 TIGR02407 ectoine_ectB diamino 99.6 1.3E-11 2.8E-16 124.9 32.6 312 112-481 77-412 (412)
310 PRK05769 4-aminobutyrate amino 99.5 3.5E-11 7.6E-16 122.5 35.0 316 112-482 96-440 (441)
311 PRK04612 argD acetylornithine 99.5 4.2E-11 9.1E-16 120.7 33.8 310 112-484 81-406 (408)
312 PRK12403 putative aminotransfe 99.5 6.8E-11 1.5E-15 121.0 35.8 328 112-485 97-456 (460)
313 PRK06541 hypothetical protein; 99.5 3.9E-11 8.5E-16 122.6 33.9 335 112-484 94-458 (460)
314 COG1982 LdcC Arginine/lysine/o 99.5 4.7E-12 1E-16 127.2 26.4 233 118-399 75-321 (557)
315 PRK06058 4-aminobutyrate amino 99.5 3.6E-11 7.9E-16 122.8 33.4 322 112-482 98-443 (443)
316 COG0160 GabT 4-aminobutyrate a 99.5 2.3E-11 4.9E-16 120.7 30.7 321 113-482 99-446 (447)
317 KOG0630 Predicted pyridoxal-de 99.5 3.4E-13 7.4E-18 129.8 16.6 265 111-397 163-440 (838)
318 PRK06105 aminotransferase; Pro 99.5 3.7E-11 8.1E-16 122.9 32.6 329 112-484 91-452 (460)
319 KOG0053 Cystathionine beta-lya 99.5 3.1E-12 6.7E-17 123.6 22.8 212 118-395 82-299 (409)
320 PRK08360 4-aminobutyrate amino 99.5 6.3E-11 1.4E-15 120.6 33.5 319 112-482 83-427 (443)
321 TIGR00713 hemL glutamate-1-sem 99.5 1.4E-11 3E-16 125.6 28.3 309 115-482 90-423 (423)
322 PRK09221 beta alanine--pyruvat 99.5 3.8E-11 8.2E-16 122.3 30.7 323 113-482 92-444 (445)
323 PRK13360 omega amino acid--pyr 99.5 7.4E-11 1.6E-15 120.1 32.6 326 113-482 89-441 (442)
324 PRK00062 glutamate-1-semialdeh 99.5 2.4E-11 5.3E-16 123.5 28.8 314 112-482 89-425 (426)
325 PRK05639 4-aminobutyrate amino 99.5 6.4E-11 1.4E-15 120.9 31.8 315 113-483 96-445 (457)
326 PRK08088 4-aminobutyrate amino 99.5 5E-11 1.1E-15 121.4 30.8 314 115-482 86-424 (425)
327 TIGR00700 GABAtrnsam 4-aminobu 99.5 3.8E-10 8.3E-15 114.7 36.7 313 114-480 77-419 (420)
328 PLN02482 glutamate-1-semialdeh 99.5 5E-11 1.1E-15 121.8 29.9 311 112-482 138-474 (474)
329 PRK05965 hypothetical protein; 99.5 2E-10 4.4E-15 117.5 34.2 336 112-484 89-450 (459)
330 KOG0634 Aromatic amino acid am 99.5 9.7E-11 2.1E-15 112.2 28.7 332 104-483 95-468 (472)
331 PRK06062 hypothetical protein; 99.5 1.6E-10 3.4E-15 118.0 32.6 317 112-483 94-447 (451)
332 TIGR00709 dat 2,4-diaminobutyr 99.5 1.9E-10 4E-15 117.5 32.9 326 112-485 81-439 (442)
333 PRK06777 4-aminobutyrate amino 99.5 4.7E-10 1E-14 113.8 35.3 315 114-479 84-419 (421)
334 PRK06943 adenosylmethionine--8 99.5 2.8E-10 6.2E-15 116.1 33.7 326 113-485 97-450 (453)
335 PRK07678 aminotransferase; Val 99.5 5.5E-10 1.2E-14 114.2 35.7 328 112-482 88-450 (451)
336 PRK07495 4-aminobutyrate amino 99.5 7.5E-10 1.6E-14 112.3 36.3 316 112-483 82-423 (425)
337 PRK07482 hypothetical protein; 99.5 4.1E-10 9E-15 115.3 34.3 334 112-485 93-458 (461)
338 PRK07480 putative aminotransfe 99.5 3.2E-10 7E-15 115.8 33.4 330 112-485 93-452 (456)
339 PLN00144 acetylornithine trans 99.5 1.8E-10 4E-15 115.4 31.1 301 112-482 56-381 (382)
340 PRK08593 4-aminobutyrate amino 99.5 7.7E-10 1.7E-14 112.9 36.1 322 112-484 84-432 (445)
341 PRK07036 hypothetical protein; 99.5 3.7E-10 8E-15 115.7 33.8 330 112-483 94-454 (466)
342 TIGR02617 tnaA_trp_ase tryptop 99.5 1.4E-10 3.1E-15 113.9 29.0 331 101-481 66-441 (467)
343 PRK12389 glutamate-1-semialdeh 99.4 1.9E-10 4.2E-15 116.9 31.0 307 112-481 92-427 (428)
344 PRK00615 glutamate-1-semialdeh 99.4 7.6E-11 1.6E-15 119.4 27.3 319 112-483 92-430 (433)
345 PRK09792 4-aminobutyrate trans 99.4 1.3E-09 2.7E-14 110.7 35.5 313 112-480 82-420 (421)
346 PRK06917 hypothetical protein; 99.4 6.8E-10 1.5E-14 113.2 33.2 333 112-485 73-441 (447)
347 TIGR00508 bioA adenosylmethion 99.4 2.1E-10 4.6E-15 116.4 29.1 312 115-481 90-426 (427)
348 PRK07030 adenosylmethionine--8 99.4 9.5E-10 2.1E-14 112.6 34.0 333 112-483 89-448 (466)
349 PRK06173 adenosylmethionine--8 99.4 5.4E-10 1.2E-14 113.3 31.7 318 112-483 86-427 (429)
350 COG3977 Alanine-alpha-ketoisov 99.4 4E-11 8.8E-16 109.2 20.8 332 90-484 54-414 (417)
351 PRK06082 4-aminobutyrate amino 99.4 7.6E-10 1.6E-14 113.2 31.9 315 111-483 111-453 (459)
352 PRK06938 diaminobutyrate--2-ox 99.4 7.2E-10 1.6E-14 113.4 31.5 331 112-484 105-463 (464)
353 PRK07483 hypothetical protein; 99.4 1.2E-09 2.7E-14 111.2 33.0 334 112-484 72-440 (443)
354 PRK08742 adenosylmethionine--8 99.4 8.5E-10 1.8E-14 112.9 31.7 333 113-484 107-470 (472)
355 PRK07481 hypothetical protein; 99.4 1E-09 2.2E-14 112.1 32.0 336 112-482 85-446 (449)
356 PRK07986 adenosylmethionine--8 99.4 4.1E-10 9E-15 114.0 28.5 315 112-480 85-422 (428)
357 PRK06148 hypothetical protein; 99.4 1.6E-09 3.5E-14 120.6 35.1 321 112-483 662-1012(1013)
358 PRK04013 argD acetylornithine/ 99.4 6.6E-10 1.4E-14 110.0 28.5 282 115-483 68-362 (364)
359 PRK06916 adenosylmethionine--8 99.4 9.1E-10 2E-14 112.7 30.5 333 112-483 98-457 (460)
360 PRK06149 hypothetical protein; 99.4 5.2E-10 1.1E-14 124.5 30.8 317 113-481 624-970 (972)
361 TIGR00699 GABAtrns_euk 4-amino 99.4 1E-09 2.3E-14 111.5 30.4 287 139-478 124-463 (464)
362 KOG0258 Alanine aminotransfera 99.4 2E-09 4.3E-14 101.8 29.2 156 97-271 101-259 (475)
363 PRK07046 aminotransferase; Val 99.4 6.8E-10 1.5E-14 113.3 28.6 311 112-483 114-452 (453)
364 PRK06931 diaminobutyrate--2-ox 99.4 2.9E-09 6.2E-14 109.0 33.1 327 112-484 100-457 (459)
365 KOG2467 Glycine/serine hydroxy 99.4 6.1E-10 1.3E-14 104.3 25.1 329 107-480 80-425 (477)
366 PRK06918 4-aminobutyrate amino 99.3 3.5E-09 7.5E-14 108.6 32.5 320 112-484 96-446 (451)
367 PRK08297 L-lysine aminotransfe 99.3 2.7E-09 5.8E-14 108.8 31.2 313 114-482 93-442 (443)
368 PRK05630 adenosylmethionine--8 99.3 1.6E-09 3.5E-14 109.6 29.3 309 113-480 83-419 (422)
369 KOG1358 Serine palmitoyltransf 99.3 1E-10 2.2E-15 110.4 18.7 306 117-482 143-466 (467)
370 TIGR03251 LAT_fam L-lysine 6-t 99.3 9.9E-09 2.1E-13 104.5 30.8 291 139-477 105-430 (431)
371 PRK06209 glutamate-1-semialdeh 99.2 7.2E-09 1.6E-13 105.5 28.1 297 112-482 87-406 (431)
372 COG0161 BioA Adenosylmethionin 99.2 1.1E-08 2.4E-13 101.2 27.9 323 118-484 92-446 (449)
373 KOG1404 Alanine-glyoxylate ami 99.2 3.9E-08 8.4E-13 93.4 28.7 292 139-475 111-432 (442)
374 COG1932 SerC Phosphoserine ami 99.2 8E-09 1.7E-13 97.8 21.8 306 108-481 45-363 (365)
375 KOG1402 Ornithine aminotransfe 99.1 2.8E-08 6.1E-13 92.1 23.8 302 113-479 101-425 (427)
376 KOG3846 L-kynurenine hydrolase 99.1 1.1E-08 2.4E-13 93.7 19.7 329 114-484 112-464 (465)
377 KOG1401 Acetylornithine aminot 99.1 1.7E-07 3.6E-12 89.8 28.0 224 139-392 118-354 (433)
378 PLN02974 adenosylmethionine-8- 99.0 1.9E-06 4.1E-11 93.2 32.8 231 215-479 567-816 (817)
379 KOG0633 Histidinol phosphate a 98.9 4.4E-08 9.4E-13 88.0 15.2 277 139-477 88-373 (375)
380 PF00202 Aminotran_3: Aminotra 98.9 3.6E-07 7.9E-12 90.1 22.6 189 112-314 58-262 (339)
381 COG1921 SelA Selenocysteine sy 98.9 1.1E-07 2.4E-12 92.0 17.1 150 139-317 85-240 (395)
382 COG1448 TyrB Aspartate/tyrosin 98.8 1.7E-06 3.7E-11 82.6 24.0 281 139-478 96-395 (396)
383 COG3033 TnaA Tryptophanase [Am 98.8 1.6E-06 3.4E-11 81.7 23.2 332 100-480 70-443 (471)
384 KOG2040 Glycine dehydrogenase 98.8 1.1E-06 2.4E-11 88.4 21.2 361 35-476 85-478 (1001)
385 PF12897 Aminotran_MocR: Alani 98.7 2.3E-06 4.9E-11 82.0 20.4 305 117-480 73-414 (425)
386 KOG3843 Predicted serine hydro 98.7 6.2E-07 1.4E-11 80.8 14.1 232 111-389 55-295 (432)
387 PF03841 SelA: L-seryl-tRNA se 98.5 1.7E-07 3.7E-12 90.0 4.8 163 117-314 51-228 (367)
388 PF06838 Met_gamma_lyase: Meth 98.3 0.00014 3E-09 69.6 21.4 242 118-410 59-319 (403)
389 KOG2790 Phosphoserine aminotra 98.2 0.00044 9.6E-09 63.5 20.3 344 77-480 9-367 (370)
390 KOG1403 Predicted alanine-glyo 97.9 0.0029 6.4E-08 58.6 19.4 301 139-480 104-436 (452)
391 KOG1412 Aspartate aminotransfe 97.7 0.0071 1.5E-07 56.5 18.3 289 138-483 100-407 (410)
392 KOG1405 4-aminobutyrate aminot 97.1 0.037 8E-07 52.8 16.4 221 213-481 254-483 (484)
393 COG4100 Cystathionine beta-lya 96.9 0.018 4E-07 53.6 12.4 152 120-301 72-236 (416)
394 PF04864 Alliinase_C: Allinase 96.4 0.22 4.7E-06 47.9 15.9 294 111-478 45-362 (363)
395 KOG1411 Aspartate aminotransfe 94.6 0.21 4.6E-06 47.7 8.8 259 171-480 145-424 (427)
396 PLN02994 1-aminocyclopropane-1 92.6 0.29 6.3E-06 42.1 5.7 63 105-183 88-152 (153)
397 TIGR03573 WbuX N-acetyl sugar 78.1 49 0.0011 32.6 13.0 104 139-271 62-171 (343)
398 COG2515 Acd 1-aminocyclopropan 76.9 31 0.00068 32.9 10.4 140 106-271 44-191 (323)
399 TIGR03679 arCOG00187 arCOG0018 69.9 70 0.0015 29.2 11.1 67 184-264 47-116 (218)
400 cd01455 vWA_F11C1-5a_type Von 68.1 16 0.00034 32.6 6.1 53 215-267 95-149 (191)
401 COG1066 Sms Predicted ATP-depe 67.2 54 0.0012 32.9 10.0 83 171-265 120-215 (456)
402 cd01994 Alpha_ANH_like_IV This 66.0 1E+02 0.0022 27.6 11.4 103 140-264 3-118 (194)
403 PF06506 PrpR_N: Propionate ca 62.8 29 0.00063 30.5 6.9 70 172-265 79-148 (176)
404 TIGR01361 DAHP_synth_Bsub phos 62.3 67 0.0014 30.3 9.5 84 180-272 119-206 (260)
405 PRK13397 3-deoxy-7-phosphohept 56.4 97 0.0021 29.0 9.3 85 179-273 108-197 (250)
406 smart00642 Aamy Alpha-amylase 55.4 26 0.00055 30.5 5.1 29 242-270 65-93 (166)
407 COG0367 AsnB Asparagine syntha 55.3 99 0.0021 32.7 10.3 120 112-267 213-339 (542)
408 COG3453 Uncharacterized protei 54.9 44 0.00094 27.2 5.7 74 178-261 43-127 (130)
409 COG0329 DapA Dihydrodipicolina 54.6 17 0.00038 35.0 4.3 61 203-265 15-78 (299)
410 PRK12595 bifunctional 3-deoxy- 54.4 93 0.002 30.9 9.4 60 212-272 236-299 (360)
411 COG0108 RibB 3,4-dihydroxy-2-b 53.7 32 0.00068 30.7 5.3 52 213-265 139-190 (203)
412 TIGR01536 asn_synth_AEB aspara 53.7 1.9E+02 0.0042 29.8 12.2 121 112-267 236-363 (467)
413 COG0386 BtuE Glutathione perox 53.5 65 0.0014 27.5 6.9 83 210-301 39-133 (162)
414 PF03162 Y_phosphatase2: Tyros 53.3 24 0.00053 30.6 4.6 72 172-246 34-108 (164)
415 TIGR02189 GlrX-like_plant Glut 53.3 82 0.0018 24.6 7.3 72 171-252 8-81 (99)
416 PF07071 DUF1341: Protein of u 52.9 58 0.0013 29.1 6.7 69 184-265 136-207 (218)
417 COG2870 RfaE ADP-heptose synth 51.2 36 0.00078 33.9 5.7 94 178-279 97-196 (467)
418 TIGR01275 ACC_deam_rel pyridox 51.0 82 0.0018 30.5 8.5 54 140-204 58-113 (311)
419 cd00951 KDGDH 5-dehydro-4-deox 50.9 47 0.001 31.9 6.6 61 203-265 11-74 (289)
420 COG0300 DltE Short-chain dehyd 50.8 2E+02 0.0043 27.2 10.5 78 171-256 30-112 (265)
421 PRK13396 3-deoxy-7-phosphohept 50.4 1.1E+02 0.0025 30.1 9.2 83 182-273 197-284 (352)
422 PRK04147 N-acetylneuraminate l 50.1 22 0.00047 34.2 4.2 52 208-259 17-69 (293)
423 TIGR00334 5S_RNA_mat_M5 ribonu 49.6 16 0.00034 31.9 2.8 53 210-273 10-62 (174)
424 COG0021 TktA Transketolase [Ca 49.3 3.4E+02 0.0074 29.1 12.7 52 210-262 220-282 (663)
425 COG1954 GlpP Glycerol-3-phosph 48.7 17 0.00036 31.5 2.7 48 213-271 12-61 (181)
426 COG0552 FtsY Signal recognitio 48.5 57 0.0012 31.7 6.6 93 171-273 167-273 (340)
427 cd00950 DHDPS Dihydrodipicolin 47.3 37 0.0008 32.4 5.3 57 201-259 9-65 (284)
428 PF08659 KR: KR domain; Inter 47.1 1.4E+02 0.0031 26.1 8.7 70 171-248 25-99 (181)
429 cd00952 CHBPH_aldolase Trans-o 46.6 40 0.00087 32.7 5.5 57 209-265 23-82 (309)
430 TIGR01244 conserved hypothetic 46.4 1.1E+02 0.0024 25.4 7.4 69 186-262 50-127 (135)
431 PF00106 adh_short: short chai 45.8 1.1E+02 0.0024 25.8 7.8 55 198-257 53-109 (167)
432 PF00926 DHBP_synthase: 3,4-di 44.8 47 0.001 29.7 5.1 51 213-264 135-185 (194)
433 PRK03170 dihydrodipicolinate s 44.4 45 0.00097 32.0 5.4 57 201-259 10-66 (292)
434 cd00886 MogA_MoaB MogA_MoaB fa 44.2 1.3E+02 0.0028 25.6 7.7 63 182-254 22-84 (152)
435 TIGR03581 EF_0839 conserved hy 43.9 2.5E+02 0.0055 25.5 13.5 69 184-265 136-207 (236)
436 COG1606 ATP-utilizing enzymes 43.7 44 0.00095 31.1 4.8 98 139-271 20-124 (269)
437 TIGR00674 dapA dihydrodipicoli 43.5 42 0.0009 32.1 5.0 58 200-259 6-63 (285)
438 cd00408 DHDPS-like Dihydrodipi 42.9 37 0.0008 32.3 4.6 63 201-265 6-71 (281)
439 COG0296 GlgB 1,4-alpha-glucan 42.8 17 0.00036 38.7 2.2 43 228-272 197-239 (628)
440 TIGR00506 ribB 3,4-dihydroxy-2 42.0 62 0.0013 29.1 5.4 51 213-264 140-190 (199)
441 TIGR03249 KdgD 5-dehydro-4-deo 41.5 56 0.0012 31.5 5.6 56 202-259 15-70 (296)
442 PRK10638 glutaredoxin 3; Provi 41.0 1.5E+02 0.0032 22.0 7.2 68 172-252 3-72 (83)
443 PF05368 NmrA: NmrA-like famil 41.0 1.1E+02 0.0025 27.8 7.5 76 172-265 24-99 (233)
444 cd00758 MoCF_BD MoCF_BD: molyb 40.8 1.4E+02 0.0031 24.6 7.3 62 181-254 20-81 (133)
445 PRK05872 short chain dehydroge 40.7 3.1E+02 0.0067 26.0 10.7 66 175-246 36-101 (296)
446 PRK03620 5-dehydro-4-deoxygluc 40.6 52 0.0011 31.8 5.2 61 203-265 18-81 (303)
447 PLN02417 dihydrodipicolinate s 40.3 58 0.0013 31.1 5.4 56 202-259 11-66 (280)
448 cd01991 Asn_Synthase_B_C The C 40.1 3.1E+02 0.0067 25.5 11.5 104 139-269 18-125 (269)
449 PRK11633 cell division protein 40.1 1.3E+02 0.0029 27.6 7.4 52 426-478 161-213 (226)
450 PF14488 DUF4434: Domain of un 39.1 1.1E+02 0.0024 26.6 6.5 56 211-266 16-84 (166)
451 COG1105 FruK Fructose-1-phosph 39.0 49 0.0011 32.0 4.6 58 211-269 110-168 (310)
452 PF00701 DHDPS: Dihydrodipicol 38.7 58 0.0012 31.2 5.2 61 203-265 12-75 (289)
453 PF01972 SDH_sah: Serine dehyd 38.6 1.5E+02 0.0032 28.1 7.5 52 240-301 98-152 (285)
454 PRK00910 ribB 3,4-dihydroxy-2- 38.3 76 0.0016 28.9 5.4 48 215-263 153-200 (218)
455 TIGR02026 BchE magnesium-proto 38.3 1.1E+02 0.0024 31.9 7.6 63 198-271 39-103 (497)
456 PRK00014 ribB 3,4-dihydroxy-2- 37.5 78 0.0017 29.1 5.4 51 215-267 157-207 (230)
457 TIGR02313 HpaI-NOT-DapA 2,4-di 37.4 71 0.0015 30.7 5.6 56 201-258 9-64 (294)
458 COG0159 TrpA Tryptophan syntha 37.2 2.4E+02 0.0053 26.6 8.7 68 184-265 138-210 (265)
459 COG0722 AroG 3-deoxy-D-arabino 37.1 2E+02 0.0044 27.8 8.1 26 211-236 241-266 (351)
460 COG1504 Uncharacterized conser 37.0 47 0.001 26.4 3.4 49 210-266 47-95 (121)
461 TIGR00177 molyb_syn molybdenum 36.9 2.5E+02 0.0054 23.6 8.3 63 180-254 27-89 (144)
462 PF00733 Asn_synthase: Asparag 36.7 1E+02 0.0022 28.3 6.5 123 114-270 2-130 (255)
463 KOG0622 Ornithine decarboxylas 36.6 2.1E+02 0.0046 28.7 8.5 82 171-266 123-217 (448)
464 PRK01792 ribB 3,4-dihydroxy-2- 36.2 84 0.0018 28.5 5.4 50 213-263 150-199 (214)
465 CHL00073 chlN photochlorophyll 36.2 71 0.0015 32.8 5.5 52 213-266 81-134 (457)
466 TIGR00683 nanA N-acetylneurami 35.9 77 0.0017 30.4 5.5 61 203-265 11-75 (290)
467 PF00448 SRP54: SRP54-type pro 35.8 1.6E+02 0.0034 26.4 7.2 91 171-271 30-127 (196)
468 cd02007 TPP_DXS Thiamine pyrop 35.7 3E+02 0.0065 24.5 9.0 24 213-237 165-188 (195)
469 TIGR01274 ACC_deam 1-aminocycl 35.5 2.1E+02 0.0046 28.0 8.7 57 139-205 67-131 (337)
470 smart00852 MoCF_biosynth Proba 35.5 2.3E+02 0.0049 23.3 7.8 62 180-253 18-79 (135)
471 PF12818 Tegument_dsDNA: dsDNA 35.4 4E+02 0.0088 25.4 11.2 54 213-266 216-273 (282)
472 PRK11889 flhF flagellar biosyn 35.2 2.7E+02 0.006 28.2 9.2 58 213-271 304-364 (436)
473 COG1748 LYS9 Saccharopine dehy 34.5 2.5E+02 0.0055 28.2 8.9 131 140-296 4-155 (389)
474 TIGR00381 cdhD CO dehydrogenas 34.2 2E+02 0.0044 28.6 8.0 47 211-267 200-247 (389)
475 PF02603 Hpr_kinase_N: HPr Ser 33.9 46 0.00099 27.5 3.1 48 211-266 64-111 (127)
476 PRK03353 ribB 3,4-dihydroxy-2- 33.9 97 0.0021 28.3 5.5 51 215-267 152-202 (217)
477 PRK05876 short chain dehydroge 33.8 4E+02 0.0087 24.9 10.6 44 198-246 56-99 (275)
478 PF06415 iPGM_N: BPG-independe 33.8 59 0.0013 29.8 4.1 48 214-261 13-60 (223)
479 KOG2865 NADH:ubiquinone oxidor 33.7 3.1E+02 0.0067 26.3 8.6 59 198-267 110-177 (391)
480 KOG1201 Hydroxysteroid 17-beta 33.6 4.4E+02 0.0096 25.3 10.2 83 139-239 40-123 (300)
481 PF00128 Alpha-amylase: Alpha 33.4 24 0.00052 33.7 1.7 32 239-270 44-75 (316)
482 PRK00724 formate dehydrogenase 33.4 1E+02 0.0022 29.1 5.8 74 172-264 170-247 (263)
483 KOG3974 Predicted sugar kinase 33.2 1.4E+02 0.0031 28.0 6.3 57 198-268 79-140 (306)
484 PF10022 DUF2264: Uncharacteri 33.2 3.4E+02 0.0073 27.0 9.6 125 2-129 2-148 (361)
485 cd00954 NAL N-Acetylneuraminic 32.8 83 0.0018 30.1 5.2 62 202-265 10-75 (288)
486 KOG2741 Dimeric dihydrodiol de 32.2 1.6E+02 0.0035 28.8 6.8 18 211-228 106-123 (351)
487 COG0541 Ffh Signal recognition 32.2 2E+02 0.0043 29.3 7.6 93 172-270 130-225 (451)
488 COG2102 Predicted ATPases of P 32.1 3.5E+02 0.0076 24.8 8.5 102 139-264 3-116 (223)
489 PRK08057 cobalt-precorrin-6x r 32.0 39 0.00085 31.6 2.7 29 243-271 48-76 (248)
490 PRK09441 cytoplasmic alpha-amy 31.7 31 0.00067 35.8 2.2 30 240-269 74-103 (479)
491 PRK00685 metal-dependent hydro 31.2 3.9E+02 0.0085 24.0 9.7 78 173-260 136-214 (228)
492 PRK10494 hypothetical protein; 31.1 1.5E+02 0.0033 27.8 6.6 71 115-206 138-211 (259)
493 TIGR00129 fdhD_narQ formate de 30.7 1.3E+02 0.0027 28.0 5.8 66 181-265 151-219 (237)
494 PF02571 CbiJ: Precorrin-6x re 30.6 43 0.00092 31.4 2.7 28 243-270 49-76 (249)
495 PF05913 DUF871: Bacterial pro 30.4 59 0.0013 32.3 3.8 58 213-270 12-70 (357)
496 TIGR01362 KDO8P_synth 3-deoxy- 30.3 3E+02 0.0065 25.8 8.0 57 211-270 126-185 (258)
497 PRK08673 3-deoxy-7-phosphohept 29.9 4.3E+02 0.0093 26.0 9.5 84 181-273 188-275 (335)
498 PF05670 DUF814: Domain of unk 29.8 33 0.00071 26.4 1.5 25 250-274 20-45 (90)
499 PF02634 FdhD-NarQ: FdhD/NarQ 29.7 1.5E+02 0.0033 27.4 6.2 74 173-265 142-219 (236)
500 PRK10867 signal recognition pa 29.6 3.4E+02 0.0073 27.8 9.1 57 212-269 166-225 (433)
No 1
>PLN02590 probable tyrosine decarboxylase
Probab=100.00 E-value=1.9e-92 Score=718.66 Aligned_cols=479 Identities=57% Similarity=1.056 Sum_probs=446.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCC----CCCCCCCChhHHhhcCCCCCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCc
Q 038818 1 MDSEEFRRQGHMIIDFIADYYRDVEK----YPVLSQVEPGYLRKRLPESAPYNPEPIETILQDVQQHIVPGITHWQSPYY 76 (486)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~ 76 (486)
|++++||++++++++.+.+|++++++ +||.+.++|++++..++..+|++|.+.+++++++.+.+.++..+|+||+|
T Consensus 54 m~~~~~r~~~~~~~d~i~~~~~~~~~~~~~~pv~~~~~p~~l~~~l~~~~P~~g~~~~~il~~~~~~i~p~~~~~~hP~f 133 (539)
T PLN02590 54 MDSELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESLKELLDDVSKKIMPGITHWQSPSY 133 (539)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCCChHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhccCCcCCCCCe
Confidence 78999999999999999999999887 79999999999999999999999999999999999999999999999999
Q ss_pred ceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHH
Q 038818 77 FAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAA 156 (486)
Q Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~ 156 (486)
+||++++++++++++|++++.+|++...|..+|.++++|+++++|+++++|+|+.+...+.++|++|+|||+||++||.+
T Consensus 134 ~a~~~~~~~~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~a 213 (539)
T PLN02590 134 FAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLA 213 (539)
T ss_pred eEeccCCCcHHHHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999864322346899999999999999999
Q ss_pred HHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEe
Q 038818 157 ARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCA 236 (486)
Q Consensus 157 a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~ 236 (486)
||++..+..+..+.++.+||+|+.+|||+.|+|+++|+|.++++.||+|..++++||+++|+++|++++++|.+|++|++
T Consensus 214 AR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~Vva 293 (539)
T PLN02590 214 ARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICA 293 (539)
T ss_pred HHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEE
Confidence 99988766666667889999999999999999999999999999999986557899999999999999999999999999
Q ss_pred ecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchH
Q 038818 237 TVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNA 316 (486)
Q Consensus 237 ~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~ 316 (486)
|+|||.+|++|||++|+++|++||+||||||||||++++++++++++.|++.|||+++|+|||+++|++||++++|++..
T Consensus 294 TaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~ 373 (539)
T PLN02590 294 TVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYS 373 (539)
T ss_pred EeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe
Q 038818 317 LIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIV 396 (486)
Q Consensus 317 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 396 (486)
+.+++...++|+...........++.+|++++|||++++++|++|+.+|.+|+++++++++++|++|.+.|++.|+|+++
T Consensus 374 l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~ 453 (539)
T PLN02590 374 LIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVV 453 (539)
T ss_pred HHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence 88889999999965433334467899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 397 APRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 397 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
.+|.+++|||++.+... .++..+++|++|.+++.++|.++++++.++|+.+||+|++||.|+++||+.+++.|.
T Consensus 454 ~~~~l~iVcFr~~~~~~------~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~ 527 (539)
T PLN02590 454 TTRYFSLVCFRLAPVDG------DEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQ 527 (539)
T ss_pred cCCceEEEEEEecCCCC------CHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHH
Confidence 99999999999987421 133458899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhc
Q 038818 477 EKLDGILAT 485 (486)
Q Consensus 477 ~~~~~l~~~ 485 (486)
+.++++.+.
T Consensus 528 ~~a~~~~~~ 536 (539)
T PLN02590 528 KHASKFTRN 536 (539)
T ss_pred HHHHHhccc
Confidence 999887653
No 2
>PLN02880 tyrosine decarboxylase
Probab=100.00 E-value=4.9e-88 Score=687.93 Aligned_cols=480 Identities=60% Similarity=1.109 Sum_probs=445.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHhhcCCCCCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCcceec
Q 038818 1 MDSEEFRRQGHMIIDFIADYYRDVEKYPVLSQVEPGYLRKRLPESAPYNPEPIETILQDVQQHIVPGITHWQSPYYFAYF 80 (486)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~ 80 (486)
||+++||+.++++++.+.+|++++.++||.+..+|++++..++..+|++|.+.+++++++.+.+.++..+|+||+|+||+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~~p~~l~~~~~~~~p~~~~~~~~~l~~~~~~i~~~~~~~~hP~f~~~~ 89 (490)
T PLN02880 10 MDAEQLRECGHRMVDFIADYYKSIENFPVLSQVQPGYLRELLPDSAPNQPETLDQVLDDVQAKILPGVTHWQSPNYFAYY 89 (490)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEec
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHH
Q 038818 81 PSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQ 160 (486)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~ 160 (486)
++++.++++++|++.+.+|+++..|..+|.++++|+++++|+++++|+|+.+..++.++|++|+|||+||++||.+||++
T Consensus 90 ~~~~~~~~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~ 169 (490)
T PLN02880 90 PSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDR 169 (490)
T ss_pred cCCCcHHHHHHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998653333468999999999999999999998
Q ss_pred HHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCC
Q 038818 161 ILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGT 240 (486)
Q Consensus 161 ~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gt 240 (486)
..+..+..+.++.+||+|+.+|||+.|+|+++|+|.++++.||+|.+++++||+++|+++|++++++|.+|++|++|+||
T Consensus 170 ~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGT 249 (490)
T PLN02880 170 VLRKVGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGT 249 (490)
T ss_pred HHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCC
Confidence 87766666667889999999999999999999999989999999865678999999999999999999999999999999
Q ss_pred ccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHH
Q 038818 241 TAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKA 320 (486)
Q Consensus 241 t~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~ 320 (486)
|.+|++|||++|+++|++||+|+||||||||++++++++++.+.++++|||+++|+|||+++|++||++++|+...+...
T Consensus 250 T~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~ 329 (490)
T PLN02880 250 TSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQS 329 (490)
T ss_pred CcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998777778
Q ss_pred hcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCC
Q 038818 321 LSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRN 400 (486)
Q Consensus 321 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~ 400 (486)
+...++|+.....+.....++.++++++|||++++++|++++.+|.+|+++++++++++++++.+.|++.|+++++.++.
T Consensus 330 ~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~ 409 (490)
T PLN02880 330 LSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRI 409 (490)
T ss_pred HccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 88889998764333344677888999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 401 FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 401 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
+++|||++.+... ..+..+++|+++.++|.++|.++++.+.+.|+.++|+|++||+|+++||+.+++.|.++++
T Consensus 410 ~~iv~Fr~~~~~~------~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~ 483 (490)
T PLN02880 410 FSLVCFRLVPPKN------NEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEAS 483 (490)
T ss_pred eEEEEEEEeCCCC------ChhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999986421 1344578899999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcC
Q 038818 481 GILATS 486 (486)
Q Consensus 481 ~l~~~~ 486 (486)
++..+|
T Consensus 484 ~~~~~~ 489 (490)
T PLN02880 484 KLLGKS 489 (490)
T ss_pred HHHHhc
Confidence 887664
No 3
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-83 Score=605.11 Aligned_cols=463 Identities=50% Similarity=0.900 Sum_probs=441.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHhhcCCCCCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCcceec
Q 038818 1 MDSEEFRRQGHMIIDFIADYYRDVEKYPVLSQVEPGYLRKRLPESAPYNPEPIETILQDVQQHIVPGITHWQSPYYFAYF 80 (486)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~ 80 (486)
|+.++||+.+.++||.|.||+++++++||.|.++|++++.+++.+.|+.|+++++|++++++.++|+++||+||+|++|+
T Consensus 1 Md~~efR~~gk~mVD~IadY~e~ir~r~v~P~v~PGYl~~llP~~aPe~pE~~~~Il~D~ekiI~PGitHw~hP~fhAyf 80 (511)
T KOG0628|consen 1 MDSEEFREEGKEMVDYIADYLENIRKRRVLPDVKPGYLRDLLPSKAPEKPESWEDILGDLEKIIMPGITHWQHPHFHAYF 80 (511)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCcchhhhhCCCCCCCChhhHHHHHHHHHHHccCCCcccCCCceeeEc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCcc--CCCcceEEcCCchHHHHHHHHHHH
Q 038818 81 PSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLF--SGTGGGVIQGTTCEAILCTLAAAR 158 (486)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~--~~~~~~~~t~ggt~a~~~al~~a~ 158 (486)
|++.+++++++|++...++.-++.|..+|..++||..+.+|+++++++|..|.. .+.++|++.+++|++++.++.+||
T Consensus 81 pa~~s~~siladmLs~~i~~vGFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR 160 (511)
T KOG0628|consen 81 PAGNSYPSILADMLSGGIGCVGFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAAR 160 (511)
T ss_pred cCccchHHHHHHHHhcccccccceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998754 358899999999999999999999
Q ss_pred HHHHHHcccc--------CCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCc
Q 038818 159 DQILNEIGRE--------NISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLI 230 (486)
Q Consensus 159 ~~~~~~~~~~--------~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~ 230 (486)
...+.+.+.. -..+.|+|+|+++|.|++|+|.+.|+ +++.+|+|+ ++.|+.+.|+++|+++.++|.+
T Consensus 161 ~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssveka~~i~~V---klR~l~td~--n~~mr~~~L~~AIe~D~arGlI 235 (511)
T KOG0628|consen 161 TEKIEEIKSRPPELHESSVLARLVAYCSDQAHSSVEKACLIAGV---KLRALPTDE--NFGMRGDTLRKAIEEDIARGLI 235 (511)
T ss_pred HHHHHHhhcCCCcccchhhhhhheEEecCcccchHHHhHhhcce---eEEEeeccc--CcCCCHHHHHHHHHHHHhCCCc
Confidence 9887765432 23689999999999999999999999 999999986 8999999999999999999999
Q ss_pred cEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEE
Q 038818 231 PLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLW 310 (486)
Q Consensus 231 p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~ 310 (486)
|++|++|.|||.+.++|+|.+|+.+|+++|+||||||||+|.+..||+++.+++|++.|||+.+++|||+.+-..|+.+|
T Consensus 236 Pf~v~at~GTT~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lW 315 (511)
T KOG0628|consen 236 PFFVCATLGTTSSCAFDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLW 315 (511)
T ss_pred cEEEEEeecCccccccccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC
Q 038818 311 VKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGD 390 (486)
Q Consensus 311 ~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 390 (486)
+|+...+.+++...|-|+..... +...++..|.+..||||+++++|..++.+|.+++++.+++..++++.+.+.+.+.
T Consensus 316 vkd~~~~~~~~~vdp~yL~h~~~--~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d 393 (511)
T KOG0628|consen 316 VKDGTKLSRAFNVDPLYLKHAYQ--GSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRAD 393 (511)
T ss_pred eecCceeeeeeecChHhhcchhh--ccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 99998888899999999987654 3378899999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHH
Q 038818 391 NRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIA 470 (486)
Q Consensus 391 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~ 470 (486)
+.|++.++.-++.||||..+. |+.|++|.++++.+|.+.+.+..+.|+.+||++++++.|+++||++
T Consensus 394 ~~FE~~~~~~lgLvcFRlk~~-------------N~~ne~Ll~~in~~g~i~l~~~~l~gk~vlRf~V~s~~t~~~di~~ 460 (511)
T KOG0628|consen 394 PRFEIVNKRILGLVCFRLKGD-------------NEINEALLNRLNSSGRIHLVPASLHGKFVLRFAVCSPLTNESDIDE 460 (511)
T ss_pred CcceeecccccceeEEeecCC-------------cHHHHHHHHHHHhcCcEEEEEeeecceEEEEEEecCCCCcHHHHHH
Confidence 999999999999999999876 7899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh
Q 038818 471 AWKVVQEKLDGIL 483 (486)
Q Consensus 471 ~i~~l~~~~~~l~ 483 (486)
.++.|.+.++.+.
T Consensus 461 a~~~I~~~a~~l~ 473 (511)
T KOG0628|consen 461 AWKIIFEAADELF 473 (511)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988754
No 4
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=100.00 E-value=7.1e-72 Score=569.56 Aligned_cols=459 Identities=23% Similarity=0.338 Sum_probs=387.0
Q ss_pred HHHHHHHHHHHHHHHHHHh--cCCCCCCCCCChhHHhhcCCCCCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCcceecCC
Q 038818 5 EFRRQGHMIIDFIADYYRD--VEKYPVLSQVEPGYLRKRLPESAPYNPEPIETILQDVQQHIVPGITHWQSPYYFAYFPS 82 (486)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~ 82 (486)
.+.+..+++.+.+++|+.+ ....|+.+.+.+... ...+|++|.+.+++++++.+.+.++..+|+||+|+||+++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~hP~f~g~~~~ 98 (522)
T TIGR03799 23 TLGRIEQKISQNLAGFLQEHIVAIEKPLSEIEKDFS----SAEIPEQPTFVSEHTQFLLDKLVAHSVHTASPSFIGHMTS 98 (522)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhccCCCchhhhhccc----ccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCeEEeccC
Confidence 4666677777777777766 334466666544432 5678999999999999999999999999999999999998
Q ss_pred C-CCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCC-CC----c-cCCCcceEEcCCchHHHHHHHH
Q 038818 83 S-GSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPK-SF----L-FSGTGGGVIQGTTCEAILCTLA 155 (486)
Q Consensus 83 ~-~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~-~~----~-~~~~~~~~~t~ggt~a~~~al~ 155 (486)
+ +.....+++ +.+.+|+|...|+.||.++++|+++++|++++++..+ .+ . ..+.++|++|+|||+||++||+
T Consensus 99 ~~p~~~~~l~~-l~~~lN~n~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~ 177 (522)
T TIGR03799 99 ALPYFMLPLSK-LMVALNQNLVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALW 177 (522)
T ss_pred CCchHHHHHHH-HHHHhcCCcceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHH
Confidence 6 344444677 6668999999999999999999999999999996322 11 1 1123579999999999999999
Q ss_pred HHHHHHHHHcc------cc---------CCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHH
Q 038818 156 AARDQILNEIG------RE---------NISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAA 220 (486)
Q Consensus 156 ~a~~~~~~~~~------~~---------~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~ 220 (486)
+||++.++..+ .+ +.++.+||+|+.+|+|+.|+++++|+|.++++.||+|+ +++||+++|+++
T Consensus 178 ~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~--~g~~d~~~L~~~ 255 (522)
T TIGR03799 178 VARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDA--NNRIDVDALRDK 255 (522)
T ss_pred HHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCC--CCcCCHHHHHHH
Confidence 99998754321 11 23578999999999999999999999988999999986 679999999999
Q ss_pred HHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeecccccc
Q 038818 221 IDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWF 300 (486)
Q Consensus 221 l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l 300 (486)
|+++.++|.+|++|++++|+|.+|++|||++|+++|+++|+|+|||||||++.++++++++++.+++++||+++|+|||+
T Consensus 256 i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l 335 (522)
T TIGR03799 256 CAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQL 335 (522)
T ss_pred HHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcC
Confidence 99988889899999999999999999999999999999999999999999999899999999999999999999999999
Q ss_pred CCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHH
Q 038818 301 FTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMA 380 (486)
Q Consensus 301 ~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a 380 (486)
++|++||++++|++..+ +.+...++|+.... ..++.++++++||++.++++|++++.+|.+|+++++++..+++
T Consensus 336 ~~P~g~G~llvr~~~~~-~~~~~~~~Yl~~~~-----~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la 409 (522)
T TIGR03799 336 YVPMGAGMVLFKDPALM-SAIEHHAEYILRKG-----SKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKA 409 (522)
T ss_pred CcCcccEEEEEeCHHHH-HHhccCcchhcCCC-----CCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 99999999999998764 46777788875421 2456778999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCC----CC----CCccchHHHHHHHHHHHHhcCcEEEeeeeEC---
Q 038818 381 QLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLG----DG----KANEGANELNRKLLESINASGQLYVSHGMVA--- 449 (486)
Q Consensus 381 ~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~----~~----~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--- 449 (486)
++|.+.|++.|+|+++.+|.+++|||++.|...+.. ++ ...+..+++|+++.+++.++|.++++.+.+.
T Consensus 410 ~~l~~~L~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~ 489 (522)
T TIGR03799 410 KYFADLIQQQPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQ 489 (522)
T ss_pred HHHHHHHhhCCCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccc
Confidence 999999999999999999999999999987542110 00 0012357889999999999999999988765
Q ss_pred ----CEeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 450 ----GIYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 450 ----~~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
+..+||++++||.||++||+.+++.=+
T Consensus 490 ~~g~~~~~lR~~~~np~tt~~~i~~~l~~~~ 520 (522)
T TIGR03799 490 YDHQPTVVFRVVLANPLTTHEILQDILDEQR 520 (522)
T ss_pred cCCCCcEEEEEEecCCCCCHHHHHHHHHHhh
Confidence 347899999999999999999887543
No 5
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=100.00 E-value=2.8e-73 Score=561.50 Aligned_cols=370 Identities=41% Similarity=0.737 Sum_probs=331.4
Q ss_pred hhHHhhcCCCCCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHH
Q 038818 35 PGYLRKRLPESAPYNPEPIETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATEL 114 (486)
Q Consensus 35 p~~~~~~~~~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l 114 (486)
|++|++.++..+|++|.+.++|++++++.+.++..+|+||+|++|++++++++++++++++..+|+|...|+.+|.++++
T Consensus 1 P~~l~~~~~~~lp~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~~~~~~i~~~~l~~~~n~n~~~~~~~P~~~~~ 80 (373)
T PF00282_consen 1 PGELRARLDEELPEEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGGPSPASILADLLASALNQNGFTWEASPAATEI 80 (373)
T ss_dssp TTSSGGGCHCCHHSSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT--CHHHHHHHHHHHHHT-BTTSTTTSHHHHHH
T ss_pred ChhhhhcCccccccCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCCccHHHHHHHHHHhhhcccccccccccccccc
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccC---CCCeEEEecCCCchHHHHHHHH
Q 038818 115 ENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGREN---ISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 115 e~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~---~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
|+++++|+++++|+|.++.....++|++|+|||+||++|+++||++..++.+..+ .++++||+|+.+|||+.|+|.+
T Consensus 81 E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~ 160 (373)
T PF00282_consen 81 EREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARI 160 (373)
T ss_dssp HHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHH
T ss_pred hHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcce
Confidence 9999999999999996543333468999999999999999999999876654444 4689999999999999999999
Q ss_pred cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccc
Q 038818 192 AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAG 271 (486)
Q Consensus 192 ~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~ 271 (486)
+|+ .++.||+|+ +++||+++|+++|+++.++|..|++|++++|||.+|++|||++|+++|++|++|+||||||||
T Consensus 161 lGl---g~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg 235 (373)
T PF00282_consen 161 LGL---GVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGG 235 (373)
T ss_dssp TTS---EEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGG
T ss_pred eee---EEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecccccc
Confidence 999 699999996 679999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC
Q 038818 272 SACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR 351 (486)
Q Consensus 272 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~ 351 (486)
.++++|.+++...+++.||||++|+|||+++|++||++++|++..+...+...+.|+.....+.....++.++++++||+
T Consensus 236 ~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~ 315 (373)
T PF00282_consen 236 SALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSRR 315 (373)
T ss_dssp GGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGH
T ss_pred cccccccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhccccccccccccccccccccccc
Confidence 98899999999999999999999999999999999999999999888888888999986544445667788999999999
Q ss_pred CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEee
Q 038818 352 FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVL 409 (486)
Q Consensus 352 ~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~ 409 (486)
+.++++|++|+.+|.+|+++++++..+++++|++.|++.++|+++.+|.+++|||++.
T Consensus 316 ~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~k 373 (373)
T PF00282_consen 316 FRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRYK 373 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEES
T ss_pred chHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEeC
Confidence 9999999999999999999999999999999999999999999999999999999984
No 6
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=9.6e-73 Score=527.48 Aligned_cols=469 Identities=21% Similarity=0.336 Sum_probs=423.4
Q ss_pred HHHHHHHHHHHHHHHHHHhc--CCCCCCCCCChhHHhhcCCCCCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCcceecCC
Q 038818 5 EFRRQGHMIIDFIADYYRDV--EKYPVLSQVEPGYLRKRLPESAPYNPEPIETILQDVQQHIVPGITHWQSPYYFAYFPS 82 (486)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~ 82 (486)
..+..+.++++.+.+|...- ++..+.+.+.|++|+..++..+|+++.++++|++++++.+. ......||+|++...+
T Consensus 32 ~te~fl~~v~~~ll~~v~~~~dr~~kv~~fhhP~~L~~l~nlel~~~~esl~qil~~cr~tl~-y~vKTgHprffNQl~~ 110 (510)
T KOG0629|consen 32 VTEPFLRAVVDILLDYVKKGFDRSQKVLDFHHPDELKELFNLELRDQPESLAQILEDCRDTLK-YSVKTGHPRFFNQLSS 110 (510)
T ss_pred hhHhhhHHHHHHHHHhhccCCcccceeecccChHHHHHHhCcccCCChhhHHHHHHHHHHHHH-hhhccCCCcchhhhcc
Confidence 34677899999999995543 33578999999999999999999999999999999998764 4456689999999999
Q ss_pred CCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHH
Q 038818 83 SGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQIL 162 (486)
Q Consensus 83 ~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~ 162 (486)
+.++.+..++++++..|.|...|+.+|.+..+|.++...+.++.||+.. ++|+|++||+.+|++|+.+||.+.+
T Consensus 111 glD~~~Lag~wlT~t~Ntn~~TYEiAPvF~lmE~~vl~km~~ivGw~~~------~DgIf~pggsisn~Ya~~~Aryk~~ 184 (510)
T KOG0629|consen 111 GLDPIGLAGEWLTSTANTNMFTYEIAPVFVLMEEEVLAKMREIVGWEEG------GDGIFAPGGSISNMYAMNCARYKNF 184 (510)
T ss_pred CCCHHHHHHHHHHhccCCCCceEEecceEEeehHHHHHHHHHHhCCCCC------CCceecCCchhHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999999999999999875 3899999999999999999999877
Q ss_pred HH---ccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecC
Q 038818 163 NE---IGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVG 239 (486)
Q Consensus 163 ~~---~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~g 239 (486)
++ .|..+.|..++|+|+.+|||+.|++..+|+|+++++.|++|+ .|.|++++||+.|-+..++|..|++|.+|+|
T Consensus 185 Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t~e--~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaG 262 (510)
T KOG0629|consen 185 PEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHCIKVKTDE--RGKMIPDDLEKKILEAKAKGGVPFFVNATAG 262 (510)
T ss_pred chhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCceeEEecccc--cCccchHHHHHHHHHHHhcCCCCeEEEecCC
Confidence 65 355567999999999999999999999999999999999997 6799999999999999999999999999999
Q ss_pred CccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHH
Q 038818 240 TTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIK 319 (486)
Q Consensus 240 tt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~ 319 (486)
||..|++|||..|+++|++|++|+||||||||+++.+..+|+++.|+++|||+++++||++++|..||.+++|.+..+.+
T Consensus 263 TTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~ 342 (510)
T KOG0629|consen 263 TTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQR 342 (510)
T ss_pred ceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC-
Q 038818 320 ALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP- 398 (486)
Q Consensus 320 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~- 398 (486)
..+..+.|+++....+...+|.++..++|||+...+++|..|++-|..|+++.++++.++|+||.++|++.++++.+..
T Consensus 343 Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~ 422 (510)
T KOG0629|consen 343 CNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFEL 422 (510)
T ss_pred hcccchhhhhccCceeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcC
Confidence 8899999999887666677888999999999999999999999999999999999999999999999999999887654
Q ss_pred -CCeeEEEEEeecCCCCCCCC--CCccchHHHHHHHHHHHHhcCcEEEeeeeECC-EeEEEEEecCCCCcHHHHHHHHHH
Q 038818 399 -RNFAVVCFRVLPSASGLGDG--KANEGANELNRKLLESINASGQLYVSHGMVAG-IYFIRFAVGATLTEDRHVIAAWKV 474 (486)
Q Consensus 399 -~~~~~v~f~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-~~~lR~~~~~~~tt~~did~~i~~ 474 (486)
|+...|||++.|+..|.... +.......++-.+.+.|.++|...++..++.. ..++|+.+.|+..+++|+|.+++.
T Consensus 423 ~pe~~nv~fw~vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldE 502 (510)
T KOG0629|consen 423 EPEHVNVCFWYVPPSLRGWQENPERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDE 502 (510)
T ss_pred CCceEEEeeccCchHhccCcccchhhhHHHhhCcHHHHHHHhccceeeEecccccccchhheecccchhhhhhHHHHHHH
Confidence 67788999999887654332 11234455666788899999998888776643 669999999999999999999999
Q ss_pred HHHHHHHH
Q 038818 475 VQEKLDGI 482 (486)
Q Consensus 475 l~~~~~~l 482 (486)
|.++.+.|
T Consensus 503 Ierlgq~l 510 (510)
T KOG0629|consen 503 IERLGQDL 510 (510)
T ss_pred HHHhccCC
Confidence 99887643
No 7
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=100.00 E-value=2.6e-67 Score=539.02 Aligned_cols=460 Identities=17% Similarity=0.230 Sum_probs=382.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCCC-CCCChhHHhhcCCCCCCCCCCCHHHHHHHHHhhhcCCCcCCCCC-Cccee
Q 038818 2 DSEEFRRQGHMIIDFIADYYRDVEKYPVL-SQVEPGYLRKRLPESAPYNPEPIETILQDVQQHIVPGITHWQSP-YYFAY 79 (486)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p-~~~~~ 79 (486)
|.+.|++++.++++.+.+|+++.. |-- +.++|+.++. ..+++...+.+++++++.+.+.++..+|+|| +|+||
T Consensus 15 n~~~~~~~~~~~~~~~~~~r~~~~--p~d~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~l~~~sv~~~~P~ry~gh 89 (608)
T TIGR03811 15 NGQLYKDLLNKLVDEHLGWRQNYM--PQDKPVISPQERTS---KSFTKTVNNMKDVLDELSSRLRTESVPWHSAGRYWGH 89 (608)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcC--CCCCCCCCHHHhcc---cccccCccCHHHHHHHHHHHHhcCCCCCCCccceEEE
Confidence 467899999999999999999843 321 3466666554 3455566689999999999999999999999 99999
Q ss_pred cCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHH
Q 038818 80 FPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARD 159 (486)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~ 159 (486)
+++++.+|+++++++...+|+|...|+.||.++.+|+++.+|+++++|++.. +|++|+|||+||+.||++||+
T Consensus 90 m~~~~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~-------~G~~TsGGT~ANl~aL~~AR~ 162 (608)
T TIGR03811 90 MNSETLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKNG-------WGHIVADGSLANLEGLWYARN 162 (608)
T ss_pred CcCCCCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCCC-------CeEEeCChHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999875 689999999999999999998
Q ss_pred HHH-----HHcc---------c--------------------------------cCCCC-eEEEecCCCchHHHHHHHHc
Q 038818 160 QIL-----NEIG---------R--------------------------------ENISR-LVVYGSDQTHSALQKAAQIA 192 (486)
Q Consensus 160 ~~~-----~~~~---------~--------------------------------~~~~~-~~v~~s~~~H~s~~~a~~~~ 192 (486)
.+. +... + ....+ .++++|+.+|||+.|++.++
T Consensus 163 ~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~il 242 (608)
T TIGR03811 163 IKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADII 242 (608)
T ss_pred hhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHc
Confidence 641 1100 0 00112 27999999999999999999
Q ss_pred CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHH---HHhCc--eEEeec
Q 038818 193 GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIA---KRYSI--WVHVDA 267 (486)
Q Consensus 193 G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~---~~~g~--~lhvD~ 267 (486)
|+|.++++.||+|+ +++||+++|+++|+++.++|.+|++||+|+|||.+|+||||++|+++| +++|+ |+||||
T Consensus 243 GlG~~~vv~VpvD~--~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDA 320 (608)
T TIGR03811 243 GIGLDQVIPVPVDS--NYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDA 320 (608)
T ss_pred CCCcccEEEeecCC--CCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeec
Confidence 99999999999985 679999999999999999999999999999999999999999999999 67897 699999
Q ss_pred cccchh--ccC------------------------------ccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCch
Q 038818 268 AYAGSA--CIC------------------------------PEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPN 315 (486)
Q Consensus 268 a~g~~~--~~~------------------------------~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~ 315 (486)
||||++ +++ +++++.+++++.||||++|+|||+++|++||++++|++.
T Consensus 321 AyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~~ 400 (608)
T TIGR03811 321 AYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDIR 400 (608)
T ss_pred cccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCHH
Confidence 999964 222 345677889999999999999999999999999999996
Q ss_pred HHHHHhcCCcccccCccCCCCCccCCCCccccCCCC-CCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhC---
Q 038818 316 ALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR-FRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGG--- 389 (486)
Q Consensus 316 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~--- 389 (486)
+.+.+...++|+.....+ .....+.++++++|+ +.++++|++++.+ |.+||++++++++++++++.+.|++
T Consensus 401 -~~~~~~~~a~Yl~~~~~~--~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~ 477 (608)
T TIGR03811 401 -MRDVISYFATYVFEKGAD--IPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEF 477 (608)
T ss_pred -HHHHHhcCcchhcccccc--CcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 456778889999753211 112456788899986 5689999999998 9999999999999999999999988
Q ss_pred ---CCCeEE--ecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCc-----EEEeeeeE----------
Q 038818 390 ---DNRFEI--VAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQ-----LYVSHGMV---------- 448 (486)
Q Consensus 390 ---~~~~~~--~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~-----~~~~~~~~---------- 448 (486)
.+.+++ +.+|++++|||++.+.+. .+.+..|++|+++++++. ..|. ++++.|.+
T Consensus 478 ~~~~~~~el~~~~~pdlniV~Fr~~~~g~-----~~l~~~n~ln~~i~~~~~~~~g~~~~~~~~~s~t~~~~~~yg~~~~ 552 (608)
T TIGR03811 478 KVGDKEIEVHPLTKPDFNMVDYVFNEKGN-----DDLVKMNKLNHAFYDYASYVKGSIYNNEFITSHTDFAIPDYGDSPF 552 (608)
T ss_pred ccCCCCeeEEecCCCCcceEEEEEecCCC-----ccHHHHHHHHHHHHHhhccccCCCCCcceEeeecccccchhhhhHH
Confidence 456776 778999999999987541 112557899999999875 2222 34555533
Q ss_pred ----------------CCEeEEEEEecCCCCcH-HHHHHHHHHHHHHHHHHh
Q 038818 449 ----------------AGIYFIRFAVGATLTED-RHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 449 ----------------~~~~~lR~~~~~~~tt~-~did~~i~~l~~~~~~l~ 483 (486)
.+..+||.++|+|..++ +.++.+++.|+++..+.+
T Consensus 553 ~~~~~~~~~~~~~~~~~~~~~lr~~~m~p~~~~~~~~~~~~~~~~~~~~~~~ 604 (608)
T TIGR03811 553 AFVNSLGFSDEEWQRAGKVTILRASVMTPYMNDKENFDEYAPKIKAAMQEKL 604 (608)
T ss_pred HHHHHcCCChhhhccCCceEEEEEEecCcccCChhhHHHHHHHHHHHHHHHH
Confidence 13568999999998877 667888888888776554
No 8
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-58 Score=461.16 Aligned_cols=441 Identities=24% Similarity=0.308 Sum_probs=355.5
Q ss_pred HHHHHHHhcCCCCCCCCCChhHHhhcCCCCCCCCCCCHHHHHHHHHhhhc-CCCcCCCCCCcceecCCCCCHHHHHHHHH
Q 038818 16 FIADYYRDVEKYPVLSQVEPGYLRKRLPESAPYNPEPIETILQDVQQHIV-PGITHWQSPYYFAYFPSSGSIAGFLGEML 94 (486)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~il~~l~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~l 94 (486)
.+.+++...+.++..+..+|-.-.......+|+.|.+.++++.++..... +....+.||++..+..+.+.++.++.+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~ 82 (460)
T COG0076 3 GLIDKDMLNSKRYSGDSLSPLFGALSDSRMAPEKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELL 82 (460)
T ss_pred hHHHHHHhhccCCCccccccchhhhhhhccCCccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHH
Confidence 34445555555555556566655566677899999999999999999844 55555569999999999999999999999
Q ss_pred HhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcccc-C--CC
Q 038818 95 SSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRE-N--IS 171 (486)
Q Consensus 95 ~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~-~--~~ 171 (486)
..++|+|...|+.+|.+.++|+++++|+++|+|++..+ .|.+|+|||+||++|+.++|+++.+..+.+ + ..
T Consensus 83 ~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~------~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~ 156 (460)
T COG0076 83 VSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEA------SGTFTSGGTEANLLALLAARERWRKRALAESGKPGG 156 (460)
T ss_pred HHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCC------ceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCC
Confidence 99999999999999999999999999999999998654 899999999999999999999987543221 1 13
Q ss_pred CeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchH
Q 038818 172 RLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGP 251 (486)
Q Consensus 172 ~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~ 251 (486)
.++|++|..+|+|+.|+++++|+ .++.+|+++. +++||+++|+++|++++..| +||+++|||++|.+|||++
T Consensus 157 ~P~ii~s~~aH~s~~Kaa~~lG~---~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g----~vV~~aGtT~~G~iDdi~~ 228 (460)
T COG0076 157 KPNIVCSETAHFSFEKAARYLGL---GLRRVPTVPT-DYRIDVDALEEAIDENTIGG----VVVGTAGTTDTGSIDDIEE 228 (460)
T ss_pred CCeEEecCcchhHHHHHHHHhCC---CceeEEeccC-ccccCHHHHHHHHHhhccCc----eEEEEecCCCCCccCCHHH
Confidence 56899999999999999999999 7778888764 68999999999999998765 6999999999999999999
Q ss_pred HHHHHHHhCceEEeeccccchhccCccchhh-hcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccC
Q 038818 252 LCDIAKRYSIWVHVDAAYAGSACICPEFRHF-IDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRN 330 (486)
Q Consensus 252 I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~-~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~ 330 (486)
|++||++|++|+|||||+||+.+++.+.+.. ..++++||||++|+|||+++|++||++++||++.+.+.......|+..
T Consensus 229 ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~ 308 (460)
T COG0076 229 LADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPG 308 (460)
T ss_pred HHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhcccccCCC
Confidence 9999999999999999999999988777776 678999999999999999999999999999997777666666666643
Q ss_pred ccCCCCCccCCCCccccCCCCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEee
Q 038818 331 KASDSKQVVDYKDWQITLSRRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVL 409 (486)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~sr~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~ 409 (486)
. ...++++.++|.. .++++|+.++.+|.+||+++++++.+++++|+++|++.+.|+++++|.+++|||++.
T Consensus 309 ~--------~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~ 380 (460)
T COG0076 309 G--------GIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLK 380 (460)
T ss_pred C--------CcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcC
Confidence 1 2345677888886 689999999999999999999999999999999999998899999999999999994
Q ss_pred cCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 410 PSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
+... .........+..+..+......+|..++..+.+.++..+++...++.++.++ +.+...+....++
T Consensus 381 ~~~~--~~~~~~~~~~~~gw~v~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 449 (460)
T COG0076 381 DDED--TLADLSERLDRRGWQVPAQLLPKGLAIVFGTHVTGRQGLKFIVANLLITDRE-ESLLALIEEPGRE 449 (460)
T ss_pred Cccc--chhchHHHHHhcCceeecccCCccceeeeeeEEeeeeeehhhcchhhhhhhh-HHHHHHhhhhhhh
Confidence 4210 0000001111122223333344455455556666777888888887777766 6666666544433
No 9
>PLN02263 serine decarboxylase
Probab=100.00 E-value=5.4e-57 Score=447.33 Aligned_cols=358 Identities=19% Similarity=0.244 Sum_probs=304.3
Q ss_pred HHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCH-HHHHHHHHHhhcCCCccccccCh---hhHHHHHHHHHHHHHHcCC
Q 038818 53 IETILQDVQQHIVPGITHWQSPYYFAYFPSSGSI-AGFLGEMLSSGFNVVGFNWMSSP---AATELENIVMDWLGEMLKL 128 (486)
Q Consensus 53 ~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~l~~~~n~~~~~~~~~~---~~~~le~~~~~~l~~l~g~ 128 (486)
++++|+++.+.+.++..+ |+|| |...++ ++.+++++...+|+-+..|..+| ...++|+++++|+++++|+
T Consensus 75 ~~~~l~~~~~~~~~~~~~-----~~gY-p~n~~~d~s~l~~~l~~~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g~ 148 (470)
T PLN02263 75 MASVLARYRKTLVERTKH-----HLGY-PYNLDFDYGALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEI 148 (470)
T ss_pred HHHHHHHHHHHHHhcccc-----eeCC-CCcccCChhhHHHHHHhhccCCCCccccCCcchhHHHHHHHHHHHHHHHhCC
Confidence 588999999998876443 8999 666677 89999999999999889999988 6899999999999999999
Q ss_pred CC-CCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCC
Q 038818 129 PK-SFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKS 207 (486)
Q Consensus 129 ~~-~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~ 207 (486)
++ ++ +|++|+||||||++|+++||+.. ++.++|+|+.+|||+.|+++++|+ +++.||+++
T Consensus 149 p~~~~------~G~vtsGGTEaNL~Al~aARe~~---------~~~vvy~S~~aH~Sv~KAa~llgi---~~~~Vp~d~- 209 (470)
T PLN02263 149 EKNEY------WGYITNCGTEGNLHGILVGREVF---------PDGILYASRESHYSVFKAARMYRM---ECVKVDTLV- 209 (470)
T ss_pred CCCCC------eEEEeCcHHHHHHHHHHHHHhhc---------CCcEEEEcCCccHHHHHHHHhcCC---cceEeccCC-
Confidence 86 33 78999999999999999999963 566899999999999999999999 999999985
Q ss_pred CCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCc-----eEEeeccccchhccCccchhh
Q 038818 208 SSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSI-----WVHVDAAYAGSACICPEFRHF 282 (486)
Q Consensus 208 ~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~-----~lhvD~a~g~~~~~~~~~~~~ 282 (486)
+|+||+++|+++|.+++ .+|++|++|+|||++|++|||++|+++|+++|+ ||||||||||+++++.+....
T Consensus 210 -~g~mD~~aL~~aI~~d~---~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~ 285 (470)
T PLN02263 210 -SGEIDCADFKAKLLANK---DKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPK 285 (470)
T ss_pred -CCcCcHHHHHHHHHhCC---CCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccc
Confidence 67999999999998754 468999999999999999999999999999997 999999999988755433444
Q ss_pred hcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCC-CchHHHHHH
Q 038818 283 IDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRF-RALKLWLVL 361 (486)
Q Consensus 283 ~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~-~~l~~~~~l 361 (486)
+.+...+|||++|+|||+++|++||++++|++. ...+...+.|+... +.++.+||++ .++++|+++
T Consensus 286 ~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~~--~~~~~~~~~Yl~~~-----------d~ti~gSR~g~~al~lW~~L 352 (470)
T PLN02263 286 VTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEH--INVLSSNVEYLASR-----------DATIMGSRNGHAPIFLWYTL 352 (470)
T ss_pred cCCCcCccEEEECCccccCCCcCEEEEEEehhh--HhhhccChHhhCCC-----------CCCcCCCCCcHHHHHHHHHH
Confidence 556667999999999999999999999999753 24677788898653 2378899997 479999999
Q ss_pred HHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcE
Q 038818 362 RSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQL 441 (486)
Q Consensus 362 ~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 441 (486)
+.+|.+|++++++++.++|+++.++|++. +++++.+|.+++|+|+.... + . ..+|+
T Consensus 353 ~~~G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~~V~f~~p~~--------------~---~-----~~~gW- 408 (470)
T PLN02263 353 NRKGYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSSTVVFERPKD--------------E---E-----FVRRW- 408 (470)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCceEEEEecCch--------------H---H-----hhcce-
Confidence 99999999999999999999999999998 78877788899999975321 1 1 12365
Q ss_pred EEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 442 YVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 442 ~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
.++.. ...+|+++| |+.+++.||+|++.|++....
T Consensus 409 ~L~~~----~~~~Hivvm-phv~~~~id~fi~DL~~~~~~ 443 (470)
T PLN02263 409 QLACQ----GNIAHVVVM-PSVTIEKLDYFLKELVEKRST 443 (470)
T ss_pred EEccC----CCcEEEEEc-CCCCHHHHHHHHHHHHHHHhh
Confidence 23321 235999997 778888999999999987653
No 10
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=3.6e-56 Score=445.76 Aligned_cols=399 Identities=16% Similarity=0.202 Sum_probs=329.0
Q ss_pred CCCCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHH
Q 038818 43 PESAPYNPEPIETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWL 122 (486)
Q Consensus 43 ~~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l 122 (486)
...+|++|.+.+++++++.+.+.. .+..||+|++|+.+++.+. +.+++..++|.|...+..+|..+++|+++++|+
T Consensus 14 ~~~~p~~~~~~~~~~~~~~~~iyl--d~~a~~~~~~~~tt~~~p~--~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~l 89 (431)
T TIGR01788 14 KYRMPEEEMPPDAAYQLIHDELSL--DGNPRLNLATFVTTWMEPE--ARKLMDETINKNMIDKDEYPQTAEIENRCVNML 89 (431)
T ss_pred cccCCCCCCCHHHHHHHHHHHhhh--cCCcceeeeeeeCCCCCHH--HHHHHHHHHhcCCCCcccCccHHHHHHHHHHHH
Confidence 357899999999999999987642 4556899999998765554 578888888877777788888889999999999
Q ss_pred HHHcCCC-C--CCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccC--CCCeEEEecCCCchHHHHHHHHcCCCCC
Q 038818 123 GEMLKLP-K--SFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGREN--ISRLVVYGSDQTHSALQKAAQIAGIDPK 197 (486)
Q Consensus 123 ~~l~g~~-~--~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~--~~~~~v~~s~~~H~s~~~a~~~~G~g~~ 197 (486)
++++|++ . + ..|.+|+||||||++|+.++|.+...+...++ ..+.+||+|..+|+|+.|+++.+|+
T Consensus 90 a~llg~~~~~~~------~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~--- 160 (431)
T TIGR01788 90 ADLWHAPAKDAE------AVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDV--- 160 (431)
T ss_pred HHHhCCCCCCCC------CeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCc---
Confidence 9999998 2 3 26778999999999999998864332211111 1356899999999999999999999
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh------CceEEeeccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY------SIWVHVDAAYAG 271 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~------g~~lhvD~a~g~ 271 (486)
+++.||+|+ +.+++|+++|+++|+++ +++|++++++|.+|.+|||++|+++|+++ |+|+||||||+|
T Consensus 161 ~v~~i~~d~-~~~~vd~~~L~~~i~~~------t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g 233 (431)
T TIGR01788 161 ELREVPMDP-GRYVIDPEQVVEAVDEN------TIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGG 233 (431)
T ss_pred eeEEEecCC-CceeeCHHHHHHHHhhC------CeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHH
Confidence 999999986 23699999999999865 46899999999999999999999999999 999999999998
Q ss_pred hhcc--CccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCC
Q 038818 272 SACI--CPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLS 349 (486)
Q Consensus 272 ~~~~--~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~s 349 (486)
++++ .++.+..+. ++++||+++|+|||+++|+|||++++|++..+...+...++|+... ..+++++++
T Consensus 234 ~~~p~~~~~~~~~~~-~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~---------~~~~t~~~s 303 (431)
T TIGR01788 234 FIAPFVYPDLEWDFR-LPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGD---------EPTFTLNFS 303 (431)
T ss_pred HHHHHhCCCchhhcC-CCCceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCC---------CCCcceecC
Confidence 8753 344444444 6799999999999999999999999999865555666677787532 123578899
Q ss_pred CCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC-CCeeEEEEEeecCCCCCCCCCCccchHHH
Q 038818 350 RRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP-RNFAVVCFRVLPSASGLGDGKANEGANEL 427 (486)
Q Consensus 350 r~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~ 427 (486)
|++ .++++|+.++.+|.+|++++++++.+++++|.++|++.|+|+++.+ +.+++|||++.+.. .. +..
T Consensus 304 R~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~--------~~--~~~ 373 (431)
T TIGR01788 304 RPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDA--------DP--GYT 373 (431)
T ss_pred chHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCC--------CC--CcC
Confidence 986 6789999999999999999999999999999999999999999987 78999999998632 00 122
Q ss_pred HHHHHHHHHhcCcEE---EeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 428 NRKLLESINASGQLY---VSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 428 ~~~l~~~l~~~g~~~---~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
++++.++|.++|+++ .+++.+++..++|++++ ++++++.++++++.|++++..+
T Consensus 374 ~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~-~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 374 LYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVR-EGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred HHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEec-CCCCHHHHHHHHHHHHHHHHhh
Confidence 567888888999863 45556788999999985 6777779999999999988765
No 11
>PLN03032 serine decarboxylase; Provisional
Probab=100.00 E-value=4.4e-50 Score=393.59 Aligned_cols=357 Identities=20% Similarity=0.232 Sum_probs=283.9
Q ss_pred HHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHHHHHHhhcCCCccccc---cChhhHHHHHHHHHHHHHHcCCC
Q 038818 53 IETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWM---SSPAATELENIVMDWLGEMLKLP 129 (486)
Q Consensus 53 ~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~---~~~~~~~le~~~~~~l~~l~g~~ 129 (486)
..++++.+.+.+.. .+..|+||.....--++.+..++....|+.+..+. .+..+.++|+++++|+++++|++
T Consensus 8 ~~~~~~~~~~~~~~-----~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~ 82 (374)
T PLN03032 8 MADILASYDKLLAE-----KSSVHFGYPYNLDFDYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELE 82 (374)
T ss_pred HHHHHHHHHHHHHH-----hhhhccCCCchhccChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCC
Confidence 45677777766543 35678999876655556666666654443333333 34468999999999999999997
Q ss_pred CCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCC
Q 038818 130 KSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSS 209 (486)
Q Consensus 130 ~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~ 209 (486)
++. .+|+||+||||||++|+.++|+.. ++.+|++|..+|+|+.|+++++|+ .++.||+|+ +
T Consensus 83 ~~~-----~~G~fTsGGTEaNl~al~~ar~~~---------~~~~vi~s~~~H~Sv~kaa~~lg~---~~~~V~~d~--~ 143 (374)
T PLN03032 83 KDE-----YWGYITTCGTEGNLHGILVGREVF---------PDGILYASRESHYSVFKAARMYRM---EAVKVPTLP--S 143 (374)
T ss_pred Ccc-----CCEEEeCchHHHHHHHHHHHHHhC---------CCcEEEeCCCceeHHHHHHHHcCC---CCeEeeeCC--C
Confidence 641 258999999999999999998752 445899999999999999999999 889999986 6
Q ss_pred cccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhC-----ceEEeeccccchhccCccchhhhc
Q 038818 210 FTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYS-----IWVHVDAAYAGSACICPEFRHFID 284 (486)
Q Consensus 210 ~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g-----~~lhvD~a~g~~~~~~~~~~~~~~ 284 (486)
|+||+++|+++|++++ ..|++|++++|+|++|++||+++|+++|+++| +|+|||||+|++.+++......++
T Consensus 144 g~id~~~L~~~i~~~~---~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~ 220 (374)
T PLN03032 144 GEIDYDDLERALAKNR---DKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVT 220 (374)
T ss_pred CcCcHHHHHHHHHHcC---CCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccC
Confidence 7999999999998653 25788999999999999999999999999996 599999999998775432222233
Q ss_pred CCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC-CCchHHHHHHHH
Q 038818 285 GIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR-FRALKLWLVLRS 363 (486)
Q Consensus 285 ~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~ 363 (486)
....+||+++|+|||+++|+|||++++|++.. +.+...++|+... ++++++||+ +.++++|++|+.
T Consensus 221 ~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~~--~~~~~~~~Yl~~~-----------d~ti~gSR~g~~~l~~w~~l~~ 287 (374)
T PLN03032 221 FRKPIGSVSVSGHKFLGCPMPCGVALTRKKHV--KALSQNVEYLNSR-----------DATIMGSRNGHAPLYLWYTLRR 287 (374)
T ss_pred CCcCCcEEEECcccccCCCcCeEEEEEEchhh--HhhccCCcccCCC-----------CCcccCCCchHHHHHHHHHHHH
Confidence 33579999999999999999999999997543 3566678888542 358899997 578999999999
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEE
Q 038818 364 FGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYV 443 (486)
Q Consensus 364 ~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 443 (486)
+|.+|++++++++.++++++.+.|++. +++++.+|.+++|+|+.+.. + .+. +|+ .+
T Consensus 288 ~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~~V~f~~~~~-------------~----~~~-----~~w-~l 343 (374)
T PLN03032 288 KGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSSTVVFERPMD-------------E----AFI-----KKW-QL 343 (374)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCceEEEEcCCCc-------------H----hHh-----hee-ee
Confidence 999999999999999999999999986 88888888889999986532 1 111 254 23
Q ss_pred eeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 444 SHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 444 ~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
+.. +..+|+++| |+.+++.||+|++.|++.
T Consensus 344 ~~~----~~~~hi~vm-~~~~~~~id~fi~dl~~~ 373 (374)
T PLN03032 344 ACE----GDIAHVVVM-PNVTVEKLDEFVEELVEV 373 (374)
T ss_pred ccc----CCEEEEEEC-CCCCHHHHHHHHHHHhcc
Confidence 321 237999998 788889999999998763
No 12
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=2e-48 Score=385.14 Aligned_cols=356 Identities=20% Similarity=0.265 Sum_probs=283.5
Q ss_pred HHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCH-HHHHHHHHHhhcCCCccccccCh----hhHHHHHHHHHHHHHHcC
Q 038818 53 IETILQDVQQHIVPGITHWQSPYYFAYFPSSGSI-AGFLGEMLSSGFNVVGFNWMSSP----AATELENIVMDWLGEMLK 127 (486)
Q Consensus 53 ~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~l~~~~n~~~~~~~~~~----~~~~le~~~~~~l~~l~g 127 (486)
..+.|+.+...+. .||+++.++|..... ++.+.+++....|+.+.. ...+ .+.++|+++++|+++++|
T Consensus 7 ~~~~~~~~~~~~~------~~~~~~~g~p~~~~~~~~~~~~~~~~~~~n~gnp-~~~~~~g~~~~~~e~~~~~~~a~l~g 79 (380)
T PRK02769 7 DQKEIEDFWLYLR------HNQYFNVGYPEAADFDYSALKRFFSFSINNCGDP-YSKSNYPLNSFDFERDVMNFFAELFK 79 (380)
T ss_pred HHHHHHHHHHHHH------HhhhcccCCCchhhcCHHHHHHHHHhhhccCCCc-cccCCCCCChHHHHHHHHHHHHHHhC
Confidence 3556666666542 366665555554444 677888888776654433 3333 478999999999999999
Q ss_pred CCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCC
Q 038818 128 LPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKS 207 (486)
Q Consensus 128 ~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~ 207 (486)
+++.. .+|++|+||||||+.|++++|++. ++.+|++|+.+|+|+.++++++|+ .++.||+++
T Consensus 80 ~~~~~-----~~G~~TsGgTean~~a~~~ar~~~---------~~~~ii~s~~~H~Sv~ka~~~lg~---~~~~V~~~~- 141 (380)
T PRK02769 80 IPFNE-----SWGYITNGGTEGNLYGCYLARELF---------PDGTLYYSKDTHYSVSKIARLLRI---KSRVITSLP- 141 (380)
T ss_pred CCCCC-----CCEEEecChHHHHHHHHHHHHHhC---------CCcEEEeCCCceehHHHHHHHcCC---CCceeccCC-
Confidence 97541 268999999999999999998752 567899999999999999999999 788899875
Q ss_pred CCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhC---ceEEeeccccchhccCccchhhhc
Q 038818 208 SSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYS---IWVHVDAAYAGSACICPEFRHFID 284 (486)
Q Consensus 208 ~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g---~~lhvD~a~g~~~~~~~~~~~~~~ 284 (486)
+|+||+++|+++|+++ +..|++|++++|+|.+|.+||+++|+++|++|| +|+|||||++++.+++.+.+..++
T Consensus 142 -~g~id~~~L~~~i~~~---~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d 217 (380)
T PRK02769 142 -NGEIDYDDLISKIKEN---KNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFS 217 (380)
T ss_pred -CCcCcHHHHHHHHHhC---CCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCC
Confidence 6799999999999875 556889999999999999999999999999998 699999999998876544333344
Q ss_pred CCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC-CCchHHHHHHHH
Q 038818 285 GIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR-FRALKLWLVLRS 363 (486)
Q Consensus 285 ~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~ 363 (486)
...++||+++|+|||+++|+|||++++|++.. . .+....+|+.. .++++++||+ +.++++|.+++.
T Consensus 218 ~~~~vDsis~s~HK~~~~P~g~G~l~~r~~~~-~-~~~~~~~yl~~-----------~d~t~~GSR~g~~~l~lw~aL~~ 284 (380)
T PRK02769 218 FADGIDSIAISGHKFIGSPMPCGIVLAKKKYV-E-RISVDVDYIGS-----------RDQTISGSRNGHTALLLWAAIRS 284 (380)
T ss_pred ccCCCCEEEECCcccCCCCCCcEEEEEehhhh-h-hcccCccccCC-----------CCCCccCCCCcHHHHHHHHHHHH
Confidence 44489999999999999999999999997643 2 33444566532 2347889997 578999999999
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEE
Q 038818 364 FGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYV 443 (486)
Q Consensus 364 ~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 443 (486)
+|.+|++++++++.++++++.++|++. +++++.+|.+++|+|+... + .+. +|+ .+
T Consensus 285 lg~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~~~~v~f~~~~--------------~----~~~-----~~w-~l 339 (380)
T PRK02769 285 LGSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPNSITVVFPCPS--------------E----RIW-----KKW-HL 339 (380)
T ss_pred HCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCceEEEEcCCC--------------H----HHH-----hCe-eE
Confidence 999999999999999999999999885 8999999999999997542 1 121 254 23
Q ss_pred eeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 444 SHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 444 ~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
+.. +..+|+++| |+.+++.||++++.|.+...
T Consensus 340 ~~~----~~~~hi~~~-~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 340 ATS----GNQAHIITM-PHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred ccc----CCEEEEEEC-CCCCHHHHHHHHHHHHHHHh
Confidence 332 237999997 78888899999999988764
No 13
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=100.00 E-value=4.1e-44 Score=355.50 Aligned_cols=340 Identities=36% Similarity=0.600 Sum_probs=287.3
Q ss_pred cceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCC-CCCccCCCcceEEcCCchHHHHHHH
Q 038818 76 YFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLP-KSFLFSGTGGGVIQGTTCEAILCTL 154 (486)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~-~~~~~~~~~~~~~t~ggt~a~~~al 154 (486)
|++++++++.+++.++|+++..+|++...|..+|...++|+++++|+++++|++ .. ..+++|+|||+||+.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~------~~~~~t~ggt~a~~~al 74 (345)
T cd06450 1 FLAGFVTTMDPPALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSED------ADGVFTSGGSESNLLAL 74 (345)
T ss_pred CcccccCCCcHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCC------CCEEEeCChhHHHHHHH
Confidence 678888889999999999999999999889999999999999999999999997 32 26899999999999999
Q ss_pred HHHHHHHHHHcccc---CCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCcc
Q 038818 155 AAARDQILNEIGRE---NISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIP 231 (486)
Q Consensus 155 ~~a~~~~~~~~~~~---~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p 231 (486)
.+++.+..++.... ..++.+|+++..+|+++.++++.+|. +++.+|+++ ++.+|+++|++++++..+++..+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~~~~ 149 (345)
T cd06450 75 LAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDV---KVRLVPVDE--DGRMDPEALEAAIDEDKAEGLNP 149 (345)
T ss_pred HHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHhc---CeEEeeeCC--CCCcCHHHHHHHHHHHHHCCCCc
Confidence 99887543321111 11356899999999999999999999 999999986 45999999999998877777778
Q ss_pred EEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEe
Q 038818 232 LFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWV 311 (486)
Q Consensus 232 ~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~ 311 (486)
.+|+++.++|++|.++|+++|+++|+++|+|+|+|+||+++....+.......++.++|++++++|||+++|+++|++++
T Consensus 150 ~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~ 229 (345)
T cd06450 150 IMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLV 229 (345)
T ss_pred EEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHH
Confidence 88999999999999999999999999999999999999888765544443334456899999999999999999998765
Q ss_pred eCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC
Q 038818 312 KNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDN 391 (486)
Q Consensus 312 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~ 391 (486)
+ ++++|.+++.++.+++++++++..++++++.+.|++++
T Consensus 230 ~-----------------------------------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~ 268 (345)
T cd06450 230 R-----------------------------------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADP 268 (345)
T ss_pred H-----------------------------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4 46778899999999999999999999999999999999
Q ss_pred CeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHH
Q 038818 392 RFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAA 471 (486)
Q Consensus 392 ~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~ 471 (486)
+++++.++..++++|++.+.. ..+..+.++.++|.++|.+++++..+.+..++|++++++++|++|||++
T Consensus 269 ~~~~~~~~~~~iv~f~~~~~~----------~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l 338 (345)
T cd06450 269 GFELLGEPNLSLVCFRLKPSV----------KLDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADAL 338 (345)
T ss_pred CeEEecCCceeEEEEEECCcc----------hhhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHH
Confidence 999888788999999986520 0123345788888888876676666656789999998878899999999
Q ss_pred HHHHHH
Q 038818 472 WKVVQE 477 (486)
Q Consensus 472 i~~l~~ 477 (486)
+++|++
T Consensus 339 ~~~l~~ 344 (345)
T cd06450 339 LEDIER 344 (345)
T ss_pred HHHHHh
Confidence 999976
No 14
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-36 Score=287.00 Aligned_cols=391 Identities=16% Similarity=0.192 Sum_probs=302.9
Q ss_pred CCCCCCCCCHHHHHHHHHhhhcCCCcCCCCC-CcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHH
Q 038818 44 ESAPYNPEPIETILQDVQQHIVPGITHWQSP-YYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWL 122 (486)
Q Consensus 44 ~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l 122 (486)
..+|++|.+-+++++.+.+...-....+..+ .+..|. ..+..-..+.+.+..+ |....+.-|....+|+++++++
T Consensus 54 ~~lP~~gl~~d~v~~~i~~~~~ld~~~~~~~vS~~v~~-~~~~~~~l~~~~~~k~---N~l~~d~fp~~~~~e~~~Vnm~ 129 (491)
T KOG1383|consen 54 FTLPSKGLPKDAVLELINDELMLDGNPRLGLASGVVYW-GEPELDKLIMEAYNKF---NPLHPDEFPVVRKLEAECVNMI 129 (491)
T ss_pred ecCCCCCCCHHHHHHHHHHHhccCCCcccCeeeEEEec-CCcchhhHHHHHHhhc---CccCccccchhHHHHHHHHHHH
Confidence 5789999999999999998765433322222 122222 1333444444444433 5666778899999999999999
Q ss_pred HHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEE
Q 038818 123 GEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAI 202 (486)
Q Consensus 123 ~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v 202 (486)
+.||+.+.+ ..|..|+|||+|.+.+....+++.... .++.++.++++...|.+++|+++++++ .++.|
T Consensus 130 ~~L~~~~~~------~~g~~t~G~Ses~l~~~k~~~~~r~~~---k~I~~p~iv~~~~v~~a~eK~a~yf~v---~l~~V 197 (491)
T KOG1383|consen 130 ANLFNAPSD------SCGCGTVGGSESGLAAKKSYRNRRKAQ---KGIDKPNIVTPQNVHAAFEKAARYFEV---ELREV 197 (491)
T ss_pred HHHhcCCcc------ccCccccccchHHHHHHHHHHHHHHhc---cCCCCccccchHHHHHHHHHHHhhEEE---EEEee
Confidence 999999854 378999999999777777666654332 356788899999999999999999999 99999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHH-hCceEEeeccccchhcc-C--cc
Q 038818 203 KTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKR-YSIWVHVDAAYAGSACI-C--PE 278 (486)
Q Consensus 203 ~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~-~g~~lhvD~a~g~~~~~-~--~~ 278 (486)
|+++ +++++|+..+.+.+++++ ++|++..+++++|.+||+++|.++.-+ |++.+|||+|.||+..+ . +.
T Consensus 198 ~~~~-~~~~~D~~k~~~~i~eNt------i~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~ 270 (491)
T KOG1383|consen 198 PLDE-GDYRVDPGKVVRMIDENT------IMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNE 270 (491)
T ss_pred eccc-cceEecHHHHHHHhccce------EEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCc
Confidence 9997 589999999999999986 489999999999999999999999998 99999999999998774 1 11
Q ss_pred chhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCC-chHH
Q 038818 279 FRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFR-ALKL 357 (486)
Q Consensus 279 ~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~-~l~~ 357 (486)
.+.- -+..++-|++.|+||++.+|.|.|+++.|++..+...+...+.|+.+. +...|+.+||... ..+.
T Consensus 271 ~~fd-Fr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~---------y~s~TlngSR~g~~va~~ 340 (491)
T KOG1383|consen 271 EEFD-FRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGI---------YASPTLNGSRPGSQVAAQ 340 (491)
T ss_pred cccc-cCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCcc---------ccCcccccCCcccHHHHH
Confidence 1111 134589999999999999999999999999988766666666666542 4456899999854 5789
Q ss_pred HHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHh
Q 038818 358 WLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINA 437 (486)
Q Consensus 358 ~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 437 (486)
|+++-.+|.+||.+..+++.+.+++|++.|++++++.++++|...++.|..... +. -++.+.|.+
T Consensus 341 wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~~-------------~i--~elsd~l~~ 405 (491)
T KOG1383|consen 341 WAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSNDV-------------NI--FELSDLLRK 405 (491)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCCcc-------------ch--hhhhHHHHh
Confidence 999999999999999999999999999999999999999887665555543321 21 256777778
Q ss_pred cCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhhc
Q 038818 438 SGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILAT 485 (486)
Q Consensus 438 ~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~~ 485 (486)
.|+..-..+... .+.+|++--++.++-.|+++..|++++++|.+.
T Consensus 406 ~GW~lnalq~P~---a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~ 450 (491)
T KOG1383|consen 406 KGWILNALQFPA---AIHICVTRVHAREDVADRFVADIRKVVEELKSL 450 (491)
T ss_pred cCcCccccCCCC---ceEEEEEeeeccHHHHHHHHHHHHHHHHHHHhC
Confidence 898543332222 456666544556655799999999999998764
No 15
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=100.00 E-value=2.1e-35 Score=295.95 Aligned_cols=367 Identities=20% Similarity=0.239 Sum_probs=269.9
Q ss_pred CCHHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCC
Q 038818 51 EPIETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPK 130 (486)
Q Consensus 51 ~~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~ 130 (486)
.+.+++|+.|++...++... . +|+|...+. ..|.++ +.+..++..+.......+....++.++++++++++|++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~-~~~~~~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~ 76 (371)
T PRK13520 2 LSEEEILEELEEYRSEDLKY-E--RILSSMCTE-PHPIAR-KAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPD 76 (371)
T ss_pred CCHHHHHHHHHHHHhcCCCH-H--HeeeeeecC-chHHHH-HHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCC
Confidence 46789999999977665543 2 588887654 334433 444444433222212224567888899999999999976
Q ss_pred CCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCc
Q 038818 131 SFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSF 210 (486)
Q Consensus 131 ~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~ 210 (486)
. .+++++|||++|..++.+++.... .++..|+++..+|+++.++++..|+ +++.||+++ ++
T Consensus 77 ~-------~~~~~~ggt~a~~~a~~~~~~~~~-------~~~~~vl~~~~~h~s~~~~~~~~g~---~~~~v~~~~--~~ 137 (371)
T PRK13520 77 A-------YGYITSGGTEANIQAVRAARNLAK-------AEKPNIVVPESAHFSFDKAADMLGV---ELRRAPLDD--DY 137 (371)
T ss_pred C-------CeEEecCcHHHHHHHHHHHHhhcc-------CCCceEEecCcchHHHHHHHHHcCc---eEEEecCCC--CC
Confidence 5 578999999999999888765310 1356788999999999999999999 999999875 56
Q ss_pred ccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhc-CCCCC
Q 038818 211 TLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFID-GIEGA 289 (486)
Q Consensus 211 ~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~-~~~~a 289 (486)
.+|+++|+++|+++ +.+|++++++|++|.++|+++|+++|+++|+++|||+||+++..........+. ...++
T Consensus 138 ~~d~~~l~~~i~~~------~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~v 211 (371)
T PRK13520 138 RVDVKAVEDLIDDN------TIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGV 211 (371)
T ss_pred cCCHHHHHHHHhhC------CEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCC
Confidence 89999999999764 336778888999999999999999999999999999999876542211100011 13479
Q ss_pred CceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCC-CchHHHHHHHHhchHH
Q 038818 290 DSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRF-RALKLWLVLRSFGVAN 368 (486)
Q Consensus 290 Dsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~-~~l~~~~~l~~~g~~g 368 (486)
|++++++|||+.+|.++|.++++++..+. .+....+|+.... .+...+++.. ..++++.++..++.++
T Consensus 212 d~~~~s~~K~~~a~~~~G~~~~~~~~~~~-~l~~~~~~~~~~~----------~~~~~gt~~~~~~~~~~~al~~l~~~g 280 (371)
T PRK13520 212 DSITIDPHKMGLAPIPAGGILFRDESYLD-ALAVDTPYLTSKK----------QATLTGTRSGAGVAATYAVMKYLGREG 280 (371)
T ss_pred ceEEECCccccCccCCceEEEEcCHHHHH-hhcccCccccCCC----------CcceEeeccChHHHHHHHHHhhhcHhH
Confidence 99999999999999999999988775543 3333334543211 1122344442 3567888999888999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeE
Q 038818 369 LRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMV 448 (486)
Q Consensus 369 ~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~ 448 (486)
++++.++..++++++.+.|+++ +++++.++..++++|.+.+ .+++.++|.++|+. +...
T Consensus 281 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v~~~~~~-----------------~~~v~~~L~~~gi~-v~~~-- 339 (371)
T PRK13520 281 YRKVVERCMENTRWLAEELKER-GFEPVIEPVLNIVAFDDPN-----------------PDEVREKLRERGWR-VSVT-- 339 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCceEEEEecCC-----------------HHHHHHHHHHCCce-eccC--
Confidence 9999999999999999999988 8885556667888887642 23566667677864 3332
Q ss_pred CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 449 AGIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 449 ~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
.+..++|++++ +.+|++||+++++.|+++++
T Consensus 340 ~~~~~iRis~~-~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 340 RCPEALRIVCM-PHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred CCCCEEEEEEE-CCCCHHHHHHHHHHHHHHhh
Confidence 23457999985 57899999999999998764
No 16
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-35 Score=283.66 Aligned_cols=343 Identities=15% Similarity=0.114 Sum_probs=257.6
Q ss_pred CCcceecCCCCCHHHHHHHHH---Hhh-cCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHH
Q 038818 74 PYYFAYFPSSGSIAGFLGEML---SSG-FNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEA 149 (486)
Q Consensus 74 p~~~~~~~~~~~~~~~~~~~l---~~~-~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a 149 (486)
+-|++|..+.+..|.++..++ +.. .|++. .+..+..+..+-++.++.+++++|+++. .++|||||||+
T Consensus 2 miYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS-~H~~G~~A~~~ve~AR~~iA~llga~~~-------eIiFTSG~TEs 73 (386)
T COG1104 2 MIYLDNAATTPVDPEVLEAMLPYLTEVFGNPSS-LHSFGREARKAVEEAREQIAKLLGADPE-------EIIFTSGATES 73 (386)
T ss_pred cccccccccCCCCHHHHHHHHHHHHhhcCCccc-hhHhHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEecCCcHH
Confidence 458888888887777665543 333 35555 5556777777777899999999999886 79999999999
Q ss_pred HHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHc---CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHH
Q 038818 150 ILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIA---GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQ 226 (486)
Q Consensus 150 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~---G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~ 226 (486)
|.+|+..+.....++ ..+..|++|...|.++...++++ |+ +|.++|+|. +|.+|+++|+++|++++
T Consensus 74 nNlaI~g~~~a~~~~-----~~~~HIIts~iEH~aVl~~~~~Le~~g~---~Vtyl~V~~--~G~v~~e~L~~al~~~T- 142 (386)
T COG1104 74 NNLAIKGAALAYRNA-----QKGKHIITSAIEHPAVLNTCRYLERQGF---EVTYLPVDS--NGLVDLEQLEEALRPDT- 142 (386)
T ss_pred HHHHHHhhHHhhhcc-----cCCCeEEEcccccHHHHHHHHHHHhcCC---eEEEeCCCC--CCeEcHHHHHHhcCCCc-
Confidence 999988754332111 14567889999999999999999 88 999999997 67999999999999875
Q ss_pred CCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcc
Q 038818 227 AGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDC 306 (486)
Q Consensus 227 ~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~ 306 (486)
.+|.+.+.+|.+|.++||++|+++|+++|++||||++++.+.+..+-.. -++|.+++|+||+. +|.|+
T Consensus 143 -----~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~------~~vD~ls~SaHK~~-GpkGi 210 (386)
T COG1104 143 -----ILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEE------LGVDLLSFSAHKFG-GPKGI 210 (386)
T ss_pred -----eEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCceeccccc------cCcceEEeehhhcc-CCCce
Confidence 4899999999999999999999999999999999999988877664321 15999999999965 69999
Q ss_pred eEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCch------HHHHHHHHhchHHHHHHHHHHHHHH
Q 038818 307 CCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRAL------KLWLVLRSFGVANLRNFLRSHVRMA 380 (486)
Q Consensus 307 g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l------~~~~~l~~~g~~g~~~~~~~~~~~a 380 (486)
|++++|+.-.+ .+.+.+. +.+.++|.... ++-.+++ +..+.+.....+...++
T Consensus 211 GaLyv~~~~~~-------~p~i~GG-------------gQE~g~RsGTenv~~Ivg~~~A~~-~a~~~~~~~~~~~~~lr 269 (386)
T COG1104 211 GALYVRPGVRL-------EPLIHGG-------------GQERGLRSGTENVPGIVGFGKAAE-IAVEELEEENARLRKLR 269 (386)
T ss_pred EEEEECCCCcc-------CceeccC-------------cCCCCCCCCCccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 99999765332 2334332 23455554432 2222222 34566777888899999
Q ss_pred HHHHHHHhCC-CCeEEecCC--C-eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeee-----eE---
Q 038818 381 QLFQELVGGD-NRFEIVAPR--N-FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHG-----MV--- 448 (486)
Q Consensus 381 ~~l~~~L~~~-~~~~~~~~~--~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-----~~--- 448 (486)
++|.+.|.+. |++.+...+ . .++++|.+.... .+.+.-.|...|+.+-++. ..
T Consensus 270 ~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~---------------gE~ll~~L~~~gI~vStGSACsS~~~~pS 334 (386)
T COG1104 270 DRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVE---------------GESLLLALDLAGIAVSTGSACSSGSLEPS 334 (386)
T ss_pred HHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCc---------------HHHHHHhccccCeEEeccccccCCCCCcc
Confidence 9999999875 888887653 2 467788887643 2344545555566422211 00
Q ss_pred -----------CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 449 -----------AGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 449 -----------~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
.-+..+|||+ +..||++|||++++.+.++++++.+
T Consensus 335 hVL~AmG~~~e~a~~siR~S~-g~~tt~eei~~~~~~l~~~i~~lr~ 380 (386)
T COG1104 335 HVLRAMGISEELAHGSIRFSL-GRFTTEEEIDAAAEALKEIIKRLRE 380 (386)
T ss_pred HHHHHcCCChHHhCccEEEEc-CCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 1257899999 5799999999999999999988764
No 17
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=100.00 E-value=1.5e-34 Score=289.97 Aligned_cols=368 Identities=19% Similarity=0.230 Sum_probs=264.8
Q ss_pred CHHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCC
Q 038818 52 PIETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKS 131 (486)
Q Consensus 52 ~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~ 131 (486)
+.+++++.|.+. +.+..+.++++++..+...+..+. .+.+..++..+.......+....+++++++++++++|+++.
T Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~ 77 (373)
T TIGR03812 1 SEEEVLEELKEY-RSEDLKYSDGRILGSMCTNPHPIA--VKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPDA 77 (373)
T ss_pred CHHHHHHHHHHH-HhcCCCCCCCcEEEEEeCCchHHH--HHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCC
Confidence 468999999984 566666688888887765444442 22233333222111122345678889999999999999765
Q ss_pred CccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcc
Q 038818 132 FLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFT 211 (486)
Q Consensus 132 ~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~ 211 (486)
.+++++||+++++.++.+++..... +.+++.|+++..+|+++.++++..|+ +++.+|+++ ++.
T Consensus 78 -------~~~~~~g~~~~~~~~~~~~~~~~~~-----~~~g~~vl~~~~~h~~~~~~~~~~G~---~~~~v~~~~--~~~ 140 (373)
T TIGR03812 78 -------YGYIVSGGTEANIQAVRAAKNLARE-----EKRTPNIIVPESAHFSFEKAAEMLGL---ELRYAPLDE--DYT 140 (373)
T ss_pred -------CeEEeccHHHHHHHHHHHHHHHHhc-----cCCCcEEEECCcchHHHHHHHHHcCC---eEEEEeeCC--CCC
Confidence 6788999999998887766542110 11446788999999999999999999 999999875 578
Q ss_pred cCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccc---hhhhc-CCC
Q 038818 212 LTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEF---RHFID-GIE 287 (486)
Q Consensus 212 ~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~---~~~~~-~~~ 287 (486)
+|+++|++++++.+ ..++.+.++|++|.++|+++|+++|+++|+|+|||+||+++....... ...+. ...
T Consensus 141 ~d~~~l~~~l~~~~------~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~ 214 (373)
T TIGR03812 141 VDVKDVEDLIDDNT------IGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLP 214 (373)
T ss_pred cCHHHHHHHHhhCc------EEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCC
Confidence 99999999997643 245555689999999999999999999999999999998765422110 00011 123
Q ss_pred CCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC-CCchHHHHHHHHhch
Q 038818 288 GADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR-FRALKLWLVLRSFGV 366 (486)
Q Consensus 288 ~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~ 366 (486)
++|++++++|||+.+|.++|.+++++++.+. .+....+|+.... .+...+++. ...++++.+++.++.
T Consensus 215 ~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~-~l~~~~~~~~~~~----------~~~~~gt~~~~~~~~~~~~l~~l~~ 283 (373)
T TIGR03812 215 GVQSITIDPHKMGLSPIPAGGILFRSKSYLK-YLSVDAPYLTVKK----------QATITGTRSGASAAATYAVIKYLGR 283 (373)
T ss_pred CCCEEEECccccCCCcCCceEEEEeCHHHHh-hhcccCcccCCCC----------CcceEeechhHHHHHHHHHHHHhCH
Confidence 7899999999999999999988887766543 3333334443211 112334554 345788889998999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeee
Q 038818 367 ANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHG 446 (486)
Q Consensus 367 ~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~ 446 (486)
+++++..++..+++++|++.|+++ +++.+.++..++++|+..+ ...+.++|.++|+. +...
T Consensus 284 ~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v~~~~~~-----------------~~~v~~~L~~~gi~-v~~~ 344 (373)
T TIGR03812 284 EGYRKIVAECMENTRYLVEELKKI-GFEPVIEPVLNIVAFEVDD-----------------PEEVRKKLRDRGWY-VSVT 344 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CCeEEcCCCceEEEEEeCC-----------------HHHHHHHHHHCCce-eccC
Confidence 999999999999999999999998 5665555677888887642 12566677777864 4332
Q ss_pred eECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 447 MVAGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 447 ~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
.+..++|++++ ..+|++|+|+++++|+++
T Consensus 345 --~~~~~iRis~~-~~~t~edid~l~~~L~~~ 373 (373)
T TIGR03812 345 --RCPKALRIVVM-PHVTREHIEEFLEDLKEI 373 (373)
T ss_pred --CCCCEEEEEEE-CCCCHHHHHHHHHHHhhC
Confidence 23468999996 468888999999999763
No 18
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.8e-34 Score=286.64 Aligned_cols=352 Identities=17% Similarity=0.169 Sum_probs=260.6
Q ss_pred CcceecCCCCCHHHHHHHHHHhhc---CCCc--cccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHH
Q 038818 75 YYFAYFPSSGSIAGFLGEMLSSGF---NVVG--FNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEA 149 (486)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~---n~~~--~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a 149 (486)
.||.+..++. .|..+.+.+..++ +.|. ..+..+..+++.+.++++.+++++|.++. ..++||.|+|++
T Consensus 24 vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~------~eIvft~~tT~a 96 (405)
T COG0520 24 VYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSS------DEIVFTRGTTEA 96 (405)
T ss_pred EEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCC------CeEEEeCChhHH
Confidence 4666655444 5666666666543 3332 35555666788888999999999999852 179999999999
Q ss_pred HHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH----HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHH
Q 038818 150 ILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA----LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDI 225 (486)
Q Consensus 150 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~ 225 (486)
+.......... .+ +++.|+++...|+| |...++..|+ +++.+|+++ ++.+|++++++.+++.+
T Consensus 97 ln~va~~l~~~-~~-------~gdeIv~s~~EH~sn~~pw~~~~~~~Ga---~v~~i~~~~--~g~~~~~~~~~~i~~~T 163 (405)
T COG0520 97 LNLVARGLGRS-LK-------PGDEIVVSDLEHHSNIVPWQELAKRTGA---KVRVIPLDD--DGLLDLDALEKLITPKT 163 (405)
T ss_pred HHHHHHHhhhh-hc-------CCCEEEEccCcchhhHHHHHHHHHhcCc---EEEEEecCC--CCCcCHHHHHHhcCCCc
Confidence 76554443211 11 56889999999988 5667777799 999999984 67999999999888765
Q ss_pred HCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCc
Q 038818 226 QAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD 305 (486)
Q Consensus 226 ~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~ 305 (486)
+ +|++++.+|.+|.+.|+++|+++||++|+|+.||+|++.+.+..+- +.. ++|++.+++|||+++|.|
T Consensus 164 k------lvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv-~~l-----~~Df~afsgHKwl~gP~G 231 (405)
T COG0520 164 K------LVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDV-QEL-----GCDFLAFSGHKWLLGPTG 231 (405)
T ss_pred e------EEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCc-hhc-----CCCEEEEcccccccCCCc
Confidence 4 8999999999999999999999999999999999999988876643 221 899999999999999999
Q ss_pred ceEEEeeCchHHHHHhcCCcccccCcc-CC-----CCCccCCCCccccCCCC--CCchHHHHHHHHhchHHHHHHHHHHH
Q 038818 306 CCCLWVKNPNALIKALSTNPEFLRNKA-SD-----SKQVVDYKDWQITLSRR--FRALKLWLVLRSFGVANLRNFLRSHV 377 (486)
Q Consensus 306 ~g~~~~~~~~~~~~~~~~~~~y~~~~~-~~-----~~~~~~~~~~~~~~sr~--~~~l~~~~~l~~~g~~g~~~~~~~~~ 377 (486)
+|++++|++..- +. .++..+.. .. ....++...+.++.+.. ...+.+-.+++.+...|+.++.++..
T Consensus 232 iGvLy~r~~~l~-~l----~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~ 306 (405)
T COG0520 232 IGVLYVRKELLE-EL----EPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHER 306 (405)
T ss_pred eEEEEEchHHHh-hc----CCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHH
Confidence 999999987442 11 22222211 00 11112222333344433 23356667788877788999999999
Q ss_pred HHHHHHHHHHhCCCCeEEecCC---CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeEC-----
Q 038818 378 RMAQLFQELVGGDNRFEIVAPR---NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVA----- 449 (486)
Q Consensus 378 ~~a~~l~~~L~~~~~~~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~----- 449 (486)
++++++.+.|+++|++++.+++ ..++++|.+.... ...+...|.++|+. +......
T Consensus 307 ~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~---------------~~dv~~~L~~~gI~-vr~g~~ca~p~~ 370 (405)
T COG0520 307 ELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIH---------------PHDVATLLDEKGIA-VRAGHHCAQPLH 370 (405)
T ss_pred HHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCC---------------HHHHHHHHHhCCeE-EEeccccccHHH
Confidence 9999999999999999999875 5889999998642 45667777788853 3222111
Q ss_pred ---C-EeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 450 ---G-IYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 450 ---~-~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
+ ...+|+|+ ++++|++|||+|+++|+++.+
T Consensus 371 ~~~~~~~~iR~S~-~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 371 RLLGVDATIRASL-HLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred HhcCCCCceEEEE-eecCCHHHHHHHHHHHHHHhh
Confidence 1 23499999 578888899999999998764
No 19
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=100.00 E-value=8.2e-32 Score=276.27 Aligned_cols=399 Identities=16% Similarity=0.090 Sum_probs=263.0
Q ss_pred hhHHhhcCCCCCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHHHHHHhh-cCCCcccc---ccChh
Q 038818 35 PGYLRKRLPESAPYNPEPIETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGEMLSSG-FNVVGFNW---MSSPA 110 (486)
Q Consensus 35 p~~~~~~~~~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~-~n~~~~~~---~~~~~ 110 (486)
|+.++..-+..+|+ .|+.++++++.++..++.... ..|.|.-.+...++..+.+.+... ...+...| ..+.+
T Consensus 35 p~~~~~~~~~~~~~--~se~~~~~~~~~l~~~n~~~~--~~~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG 110 (481)
T PRK04366 35 PEELLRKEPPELPE--VSELEVVRHYTRLSQKNYGVD--TGFYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQG 110 (481)
T ss_pred CHHHhcCCCCCCCC--CCHHHHHHHHHHHHhcCCCCC--cceecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhH
Confidence 55565555567887 899999999999776665422 257665533333333444443333 11344566 35666
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH
Q 038818 111 ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ 190 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 190 (486)
..++..++.+|+++++|++. ..+..++|+.+.+.++.+++.....+ |. .++..|+++...|.+....++
T Consensus 111 ~lel~~~~~~~la~l~G~~~--------~~l~~~~GA~a~~~~l~~~r~~~~~~-Gd--~~~~~Vlv~~~~hp~~~~~~~ 179 (481)
T PRK04366 111 ALELMYELQEWLKEITGMDA--------VTLQPAAGAHGELTGLLMIRAYHEAR-GD--TKRTEVIVPDSAHGTNPASAA 179 (481)
T ss_pred HHHHHHHHHHHHHHHhCCCc--------eEEEeCcHHHHHHHHHHHHHHHhhcc-Cc--CCCCEEEEcCCccHhHHHHHH
Confidence 77888999999999999974 34555677777776666554432211 10 134578899999999999999
Q ss_pred HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc-CCchHHHHHHHHhCceEEeeccc
Q 038818 191 IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV-DPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 191 ~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i-dpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
..|+ +++.+|+++ +|.+|+++|++++++++ .+|+++.++ ++|.+ +|+++|+++|+++|+|+|||+|+
T Consensus 180 ~~G~---~vv~v~~~~--~~~~D~e~L~~~i~~~t------~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a~ 247 (481)
T PRK04366 180 MAGF---KVVEIPSNE--DGLVDLEALKAAVGEDT------AALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGAN 247 (481)
T ss_pred HcCC---EEEEeecCC--CCCcCHHHHHhhcccCC------eEEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEecC
Confidence 9999 999999974 57999999999997654 367777766 89988 69999999999999999999999
Q ss_pred cchhccCccchhhhcCCCCCCceeeccccccCCCCcc-----eEEEeeCchHHHHHhcCCcccccCccCCCCCccCC-CC
Q 038818 270 AGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDC-----CCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDY-KD 343 (486)
Q Consensus 270 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~-----g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~-~~ 343 (486)
..+.+..... +-.++|++++++||||++|.++ |+++++++.. +.+ ++.+...... .....+ ..
T Consensus 248 ~~~~~g~~~~-----~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~--~~l---p~~~v~~~g~-~~~l~~~r~ 316 (481)
T PRK04366 248 LNAILGKARP-----GDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELA--PFL---PVPVVEKDGD-RYRLDYDRP 316 (481)
T ss_pred hhhhcccCCc-----cccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhH--hhC---CCCeeeccCC-ceeeccccc
Confidence 6543211111 1237999999999999988765 5788876522 222 2222111000 000111 11
Q ss_pred ccccCCCCCC-----chHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC-CCeeEEEEEeecCCCCCCC
Q 038818 344 WQITLSRRFR-----ALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP-RNFAVVCFRVLPSASGLGD 417 (486)
Q Consensus 344 ~~~~~sr~~~-----~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~ 417 (486)
..+.-.+.+. ++++|.++..+|.+|++++.++...+++||+++|+++ +++..+ +..+.+.|.......
T Consensus 317 ~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~~---- 390 (481)
T PRK04366 317 KSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI--YDLPYDRPCMHEFVLSGKKLKE---- 390 (481)
T ss_pred ccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--CcccCCCCeeEEEEEECccccc----
Confidence 1111122222 3688999999999999999999999999999999887 444322 333444444321000
Q ss_pred CCCccchHHHHHHHHHHHHhcCcEEEeee-eECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 418 GKANEGANELNRKLLESINASGQLYVSHG-MVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 418 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
. +....++.++|.+.|+...... .......+|++++ ..+|++|||+++++|+++.+++.+
T Consensus 391 ----~--g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~-e~~t~edid~l~~~l~~i~~~~~~ 451 (481)
T PRK04366 391 ----T--GVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPT-ETESKETLDAFIAAMKQIAEEAKE 451 (481)
T ss_pred ----c--CCCHHHHHHHHHHCCccCCccccccccCCeEEEccc-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 0 1124567778888887422110 0112457999985 688899999999999999887654
No 20
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=100.00 E-value=2.1e-31 Score=282.41 Aligned_cols=385 Identities=14% Similarity=0.095 Sum_probs=268.6
Q ss_pred CCHHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHHHHHHhhcCCC--ccccc---cChhhHHHHHHHHHHHHHH
Q 038818 51 EPIETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGEMLSSGFNVV--GFNWM---SSPAATELENIVMDWLGEM 125 (486)
Q Consensus 51 ~~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~--~~~~~---~~~~~~~le~~~~~~l~~l 125 (486)
.|+.++++.+.++-.++.... + .|.+.-.+..-.++ +.+++....+.. .+.|. .+.+..+++.++.+||+++
T Consensus 466 ~sE~e~~r~~~~L~~kn~~~~-~-~fi~lGsctmk~na-~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~el 542 (939)
T TIGR00461 466 HSETEMLRYLHRLESKDLALN-N-SMIPLGSCTMKLNA-TAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSI 542 (939)
T ss_pred CCHHHHHHHHHHHHhcCCCcc-c-cCCCCccCCCccCH-HHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHH
Confidence 389999999998766664432 2 34443323222333 444443333322 22332 4455789999999999999
Q ss_pred cCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecC
Q 038818 126 LKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTT 205 (486)
Q Consensus 126 ~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d 205 (486)
+|++. .++..++|+++++++++++|.... ..|.. ++.+|++|..+|.+..+.++..|+ +++.||+|
T Consensus 543 tGmd~--------~Sl~p~aGA~gE~agL~aiR~y~~-~rge~--~R~~vlip~saHgtnPasa~~~G~---~Vv~V~~d 608 (939)
T TIGR00461 543 TGFDA--------ISLQPNSGAQGEYAGLRVIRSYHE-SRGEN--HRNICLIPVSAHGTNPASAAMAGM---QVVPVNCD 608 (939)
T ss_pred HCCCC--------cccCCchHHHHHHHHHHHHHHHHH-hcCCC--CCCEEEEEccccCcCHHHHHHCCC---EEEEeccC
Confidence 99985 467888899999989998887542 12221 567899999999999999999999 99999998
Q ss_pred CCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC-chHHHHHHHHhCceEEeeccccchhccCccchhhhc
Q 038818 206 KSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP-LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFID 284 (486)
Q Consensus 206 ~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp-l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~ 284 (486)
+ +|.+|+++|++++++ .+..+.+|++++++| +|.++| +++|+++|+++|.+++||+|+..........
T Consensus 609 ~--~G~iDle~L~~~i~~---~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~P----- 677 (939)
T TIGR00461 609 Q--DGNIDLVDLKNKAEQ---HGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSP----- 677 (939)
T ss_pred C--CCCcCHHHHHHHHhh---cCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCc-----
Confidence 5 579999999999975 233467899999999 799977 9999999999999999999996543322211
Q ss_pred CCCCCCceeeccccccCCCCcc-----eEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCc----h
Q 038818 285 GIEGADSFSLNAHKWFFTTLDC-----CCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRA----L 355 (486)
Q Consensus 285 ~~~~aDsi~~~~hK~l~~p~~~-----g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~----l 355 (486)
+-.++|++++|.||+|+.|.|+ |++.+|+. +...+ |+.......+..+. ..+.+...++.++. +
T Consensus 678 g~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~--L~~~l---Pg~~v~~t~d~~gr--eq~Iga~s~~~~g~a~~~l 750 (939)
T TIGR00461 678 GDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH--LIPFL---PKHDVVSMITGIGG--SKSIGSVSAAPYGSASILP 750 (939)
T ss_pred cccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhh--chhhc---CCCcccccccCCCC--ccccccccccccCcHHHHH
Confidence 2238999999999999966555 99999964 22222 22211110000000 01111222333333 8
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC----CCeeEEEEEeecCCCCCCCCCCccchHHHHHHH
Q 038818 356 KLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP----RNFAVVCFRVLPSASGLGDGKANEGANELNRKL 431 (486)
Q Consensus 356 ~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l 431 (486)
+.|++++.+|.+|+++..+....+|+|++++|++ +++++.+ +..+.++|++.+.. +..+..+.++
T Consensus 751 ~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~--~~~~l~~~~~~~~~hEfv~~~~~~~---------~~~g~~~~dI 819 (939)
T TIGR00461 751 ISWMYIKMMGNEGLPKASVVAILNANYMATRLKD--HYPILFVGTLKHVAHECILDLRPLK---------AKTGIEAIDV 819 (939)
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc--cCcccccCCCCceeEEEEEeccchh---------hhcCCCHHHH
Confidence 9999999999999999999999999999999987 4576654 34577888887531 1223446778
Q ss_pred HHHHHhcCcEEEeee-eECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 432 LESINASGQLYVSHG-MVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 432 ~~~l~~~g~~~~~~~-~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
.++|.+.|+...+.+ ...+. +=+.++ ..++++|||++++++.++.+++.+
T Consensus 820 akrL~d~G~hapt~~~pv~g~--lmiepT-E~eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 820 AKRLQDYGFHAPTLSFPVPGT--LMVEPT-ESESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred HHHHHhCCeeccccCCccCCe--EEEEee-ccCCHHHHHHHHHHHHHHHHHHHH
Confidence 888989997533322 22343 334444 377889999999999999877653
No 21
>PRK05367 glycine dehydrogenase; Provisional
Probab=100.00 E-value=1e-30 Score=282.30 Aligned_cols=399 Identities=14% Similarity=0.062 Sum_probs=268.4
Q ss_pred hhHHhhcCCCCCCC---CCCCHHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHHHHHHhhcCCC--cccc---c
Q 038818 35 PGYLRKRLPESAPY---NPEPIETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGEMLSSGFNVV--GFNW---M 106 (486)
Q Consensus 35 p~~~~~~~~~~~p~---~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~--~~~~---~ 106 (486)
|..+++.-+..+|+ .-.|+.++++.++++-.++....++..++|.... ...|... +.+. ..+.. .+.| +
T Consensus 459 ~~~~~r~~~~~~~~~f~~~~sE~e~~r~~~~l~~kn~~~~~~~i~lGsct~-~~~p~~~-~~~~-~~~~f~~~hP~qp~e 535 (954)
T PRK05367 459 PAALLRTSAYLTHPVFNRYHSETEMMRYLRRLEDKDLALDRSMIPLGSCTM-KLNAAAE-MIPI-TWPEFANLHPFAPAE 535 (954)
T ss_pred CHHHhcCCcccCCcccCCCCCHHHHHHHHHHHHhcCcCcccceeeCCcCCC-cCCHHHH-HHHH-hCccccccCCCChHH
Confidence 44454443443443 2248999999999987777665555567888332 2223222 2222 22111 2222 3
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ 186 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 186 (486)
.+.+..+++.++.+|+++++|++. ..+..+||+++++.+++++|....++ |.. ++.+|++|..+|.|+.
T Consensus 536 ~~qG~l~~i~e~q~~l~eltG~d~--------~sl~~~~ga~ge~agL~a~r~~~~~~-G~~--~r~~vlis~~aH~snp 604 (954)
T PRK05367 536 QAAGYRELIDQLEAWLAEITGYDA--------VSLQPNAGAQGEYAGLLAIRAYHESR-GEG--HRDVCLIPSSAHGTNP 604 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCC--------EEECccHHHHHHHHHHHHHHHHhhcc-CCC--CCCEEEEEchhhhhhH
Confidence 345577899999999999999974 23446678899988887777543221 211 4568999999999999
Q ss_pred HHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEee
Q 038818 187 KAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVD 266 (486)
Q Consensus 187 ~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD 266 (486)
+++..+|+ +++.||++. ++.+|+++|++++++. +..+++|+++.+++..+..+|+++|+++|+++|+|+|||
T Consensus 605 ~sa~~~G~---~vv~v~~d~--~G~iD~~~L~~~i~~~---~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VD 676 (954)
T PRK05367 605 ASAVMAGM---KVVVVACDE--NGNIDLDDLRAKAEEH---ADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLD 676 (954)
T ss_pred HHHHHCCC---EEEEECCCC--CCCcCHHHHHHHHhcc---CCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEE
Confidence 99999999 999999985 5699999999999753 123678889999887444589999999999999999999
Q ss_pred ccccchhccCccchhhhcCCCCCCceeeccccccCCCCcce-----EEEeeCchHHHHHhcCCcccccCccCCCCCccCC
Q 038818 267 AAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCC-----CLWVKNPNALIKALSTNPEFLRNKASDSKQVVDY 341 (486)
Q Consensus 267 ~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g-----~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 341 (486)
+|++++....... +.-++|++++++||||+.|.|+| ++++++. +. ...++.........
T Consensus 677 gA~~~al~~l~~p-----g~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~--l~---p~lpg~~v~~~~~~------ 740 (954)
T PRK05367 677 GANMNAQVGLARP-----GDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAH--LA---PFLPGHPVQIAGGE------ 740 (954)
T ss_pred CcChhhccCCCCh-----hhcCCCEEEecCcccCCCCcCCCCCceEEEeeccc--cc---ccCCCCccCcCCCC------
Confidence 9997554333211 12389999999999998888755 8888742 21 11122221100000
Q ss_pred CCccccCCCCC----CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEec--C--CCeeEEEEEeecCCC
Q 038818 342 KDWQITLSRRF----RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVA--P--RNFAVVCFRVLPSAS 413 (486)
Q Consensus 342 ~~~~~~~sr~~----~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~--~--~~~~~v~f~~~~~~~ 413 (486)
...+..++..+ .++..|.+++.+|.+|++++.+....+|+|++++|++. +++.. + +..+.++|.+.+..
T Consensus 741 ~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~--~~~~~~~~~~~~~~e~i~~~~~~~- 817 (954)
T PRK05367 741 TGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDH--YPVLYTGANGRVAHECILDLRPLK- 817 (954)
T ss_pred CCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhh--cCccccCCCCCcccceEEEeeccc-
Confidence 00111122222 33568999999999999999999999999999999874 44432 2 33456666664321
Q ss_pred CCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 414 GLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 414 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
...+..+..+.++|.+.|+..... .+...+.+|++++ ..++++|||+++++|+.+.+++.+
T Consensus 818 --------~~~g~~~~di~krL~d~G~~~~t~-~~pv~~~l~i~pt-E~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 818 --------ESTGITVDDIAKRLIDYGFHAPTM-SFPVAGTLMVEPT-ESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred --------ccCCCCHHHHHHHHHHCCCeEeec-CCccCCEEEEEee-ecCCHHHHHHHHHHHHHHHHHHHH
Confidence 000112356778888888753331 2233557999985 588889999999999999887754
No 22
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.97 E-value=2.4e-29 Score=257.94 Aligned_cols=381 Identities=14% Similarity=0.109 Sum_probs=248.7
Q ss_pred ChhHHhhcCCCCCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHHH------HHHhhcCCCcccccc
Q 038818 34 EPGYLRKRLPESAPYNPEPIETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGE------MLSSGFNVVGFNWMS 107 (486)
Q Consensus 34 ~p~~~~~~~~~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~------~l~~~~n~~~~~~~~ 107 (486)
=|++++...+.+||+++ +.+++++++.+....+.....+++++|.-..+...|..+.+ +++. ++++...+
T Consensus 31 ~p~~~~~~~~~~lp~~~-~~~~v~~~~~~~~~~~~~~~~~~~~lg~g~~~~~~p~~~~~~~~~~~~~~~-y~~~~~~~-- 106 (447)
T PRK00451 31 IPEELRLKRPLDLPPGL-SEMELLRHLRELAAKNKTAEEYPSFLGAGAYDHYIPAVVDHIISRSEFYTA-YTPYQPEI-- 106 (447)
T ss_pred CCHHHHhCCCCCCCCCC-CHHHHHHHHHHHHhcCCCcCcCcccCcccccCCcCcHHHHHHHhchhHHHh-cCCCCCcc--
Confidence 37788888888999975 99999999998765554444578888843222222333333 3333 44433322
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH
Q 038818 108 SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK 187 (486)
Q Consensus 108 ~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 187 (486)
++...+...+..+|+++++|++.. .+++|+|||+++.. +..++... ++..|+++...|.+..+
T Consensus 107 ~~g~~~~~~e~~~~la~l~g~~~~-------~v~~~~g~t~~~~~-~~~a~~~~---------~g~~Vlv~~~~~~~~~~ 169 (447)
T PRK00451 107 SQGTLQAIFEYQTMICELTGMDVA-------NASMYDGATALAEA-ALMAVRIT---------KRKKVLVSGAVHPEYRE 169 (447)
T ss_pred chHHHHHHHHHHHHHHHHhCCCcc-------eEEecCcHHHHHHH-HHHHHHhc---------CCCEEEEeCccCHHHHH
Confidence 444566666777899999999875 68899999976544 44343211 56678889999999888
Q ss_pred HHHH----cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceE
Q 038818 188 AAQI----AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWV 263 (486)
Q Consensus 188 a~~~----~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~l 263 (486)
+++. .|+ +++.+|+++ + .+|+++|+++|++++ .+|+++++ |++|.++|+++|+++|+++|+|+
T Consensus 170 ~~~~~~~~~G~---~~~~v~~~~--~-~~d~~~l~~~i~~~t------~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~ 236 (447)
T PRK00451 170 VLKTYLKGQGI---EVVEVPYED--G-VTDLEALEAAVDDDT------AAVVVQYP-NFFGVIEDLEEIAEIAHAGGALF 236 (447)
T ss_pred HHHHHHHhCCc---EEEEecCCC--C-CCCHHHHHHhcCCCe------EEEEEECC-CCCCeeCCHHHHHHHHHHCCCEE
Confidence 7765 577 999999875 4 899999999986543 46777777 88999999999999999999999
Q ss_pred Ee--eccccchhccCccchhhhcCCCCCCceeeccccc-----cCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCC
Q 038818 264 HV--DAAYAGSACICPEFRHFIDGIEGADSFSLNAHKW-----FFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSK 336 (486)
Q Consensus 264 hv--D~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~-----l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 336 (486)
+| |....+ .+..+ +--++|.++.++||| +++| ++|+++++++. .. .+. +..+.......
T Consensus 237 iv~~d~~~~g-~~~~~-------~~~~~D~~~~s~~k~~~~~~~~Gp-g~G~l~~~~~~-~~-~~~--~~~~g~~~~~~- 302 (447)
T PRK00451 237 IVGVDPVSLG-LLKPP-------GEYGADIVVGEGQPLGIPLSFGGP-YLGFFATRKKL-VR-QMP--GRLVGETVDAD- 302 (447)
T ss_pred EEEcChHHhc-cCCCc-------ccCCCCEEEECCCcCCCCCCCCCC-CchHHHhhHHH-Hh-hCC--CCEeeeecccC-
Confidence 98 644322 21111 112799999999997 4455 78988887542 22 221 11010000000
Q ss_pred CccCC----------CCccc----cCCCC-CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCe
Q 038818 337 QVVDY----------KDWQI----TLSRR-FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNF 401 (486)
Q Consensus 337 ~~~~~----------~~~~~----~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~ 401 (486)
+...+ ..+.. .++.. ..+++.+.+++.++.+|++++.++..++++++.+.|++++++++...+.+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 382 (447)
T PRK00451 303 GKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFDGPFF 382 (447)
T ss_pred CCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecCCCeE
Confidence 00000 00000 01100 01134445567788999999999999999999999999988988744434
Q ss_pred eEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEE-EeeeeE--CCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 402 AVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLY-VSHGMV--AGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 402 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~-~~~~~~--~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
..+++.+... ..++.++|.++|++. +....+ ....++|++++ ..+|++||++++++|+++
T Consensus 383 ~~~~v~~~~~----------------~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~-~~~t~e~i~~l~~~L~~~ 445 (447)
T PRK00451 383 NEFVVRLPKP----------------AEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVT-EKRTKEDIDALVAALGEV 445 (447)
T ss_pred EEEEEecCCC----------------HHHHHHHHHhcCCCCCcccccccCCcCCEEEEecC-CCCCHHHHHHHHHHHHHH
Confidence 4445554211 235677777777641 111111 11358999985 567888999999999876
Q ss_pred H
Q 038818 479 L 479 (486)
Q Consensus 479 ~ 479 (486)
.
T Consensus 446 ~ 446 (447)
T PRK00451 446 L 446 (447)
T ss_pred h
Confidence 4
No 23
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.97 E-value=3.4e-29 Score=251.54 Aligned_cols=341 Identities=13% Similarity=0.080 Sum_probs=233.4
Q ss_pred cceecCCCCCHHHHHHHHHHhhcC----CCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHH
Q 038818 76 YFAYFPSSGSIAGFLGEMLSSGFN----VVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAIL 151 (486)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~n----~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~ 151 (486)
||++-..++.++.+ .+.+..++. +....+..++.+..+.+++++++++++|.+++ .+++|+|||+++.
T Consensus 2 yld~aa~~~~~~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~i~~t~~~t~a~~ 73 (379)
T TIGR03402 2 YLDNNATTRVDPEV-LEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPD-------EIIFTSGGTESDN 73 (379)
T ss_pred cCCCcCCCCCCHHH-HHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCcHHHHHH
Confidence 56666555555544 334433321 11112223345566777899999999998765 6899999999998
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH---cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCC
Q 038818 152 CTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI---AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAG 228 (486)
Q Consensus 152 ~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~---~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g 228 (486)
.++....... .++.+|+++..+|+++...+.. .|+ +++.+|++. ++.+|+++|+++++++
T Consensus 74 ~al~~~~~~~--------~~~~~vv~~~~~~~s~~~~~~~~~~~G~---~v~~v~~~~--~g~~~~~~l~~~i~~~---- 136 (379)
T TIGR03402 74 TAIKSALAAQ--------PEKRHIITTAVEHPAVLSLCQHLEKQGY---KVTYLPVDE--EGRLDLEELRAAITDD---- 136 (379)
T ss_pred HHHHHHHHhc--------CCCCeEEEcccccHHHHHHHHHHHHcCC---EEEEEccCC--CCcCCHHHHHHhcCCC----
Confidence 8887664321 0346788899999987655443 588 999999875 4689999999998654
Q ss_pred CccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceE
Q 038818 229 LIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCC 308 (486)
Q Consensus 229 ~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~ 308 (486)
+.+|++++++|++|.+.|+++|+++|+++|+++|+|++++.+....+- .. .++|++++++|| +++|.|+|+
T Consensus 137 --~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~-~~-----~~~D~~~~s~~K-~~gp~G~g~ 207 (379)
T TIGR03402 137 --TALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDL-KE-----MNIDMLSLSGHK-LHGPKGVGA 207 (379)
T ss_pred --cEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccccccCc-cc-----CCCCEEEEcHHH-cCCCCceEE
Confidence 347888999999999999999999999999999999999876543321 11 279999999999 678999999
Q ss_pred EEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC-C-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH
Q 038818 309 LWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR-F-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQEL 386 (486)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~-~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~ 386 (486)
+++++... ..| ++..... ....+.+.. . ..+++..+++.+ .++++++.++..++++++++.
T Consensus 208 l~v~~~~~------~~p-~~~g~~~---------~~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~ 270 (379)
T TIGR03402 208 LYIRKGTR------FRP-LLRGGHQ---------ERGRRAGTENVPGIVGLGKAAELA-TEHLEEENTRVRALRDRLEAG 270 (379)
T ss_pred EEECCCCC------CCC-cccCCcc---------CCCcCCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHH
Confidence 99986521 112 2211100 000111111 1 123334444443 456788888999999999999
Q ss_pred HhC-CCCeEEecCCC---eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeE--------------
Q 038818 387 VGG-DNRFEIVAPRN---FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMV-------------- 448 (486)
Q Consensus 387 L~~-~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-------------- 448 (486)
|.+ ++++++..++. .+++.|.+.... ...+.+.|.++|+.+-++...
T Consensus 271 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~l 335 (379)
T TIGR03402 271 LLARIPDARLNGDPTKRLPNTVNISFEYIE---------------GEAILLLLDMEGICASSGSACTSGSLEPSHVLRAM 335 (379)
T ss_pred HHhhCCCEEEeCCCccCCCCEEEEEecCCC---------------HHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHc
Confidence 985 88999876542 347777765321 235566666677643222100
Q ss_pred -----CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 449 -----AGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 449 -----~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
...+.+|+|+ ++.+|++|||++++.|+++++++.
T Consensus 336 g~~~~~~~~~vR~S~-~~~~t~~di~~~~~~l~~~~~~~~ 374 (379)
T TIGR03402 336 GVPHTAAHGSIRFSL-SRYNTEEDIDYVLEVLPPIIARLR 374 (379)
T ss_pred CCChhhcCceEEEEc-CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0136899999 578899999999999999887754
No 24
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.97 E-value=9.3e-29 Score=250.47 Aligned_cols=352 Identities=16% Similarity=0.113 Sum_probs=239.9
Q ss_pred CcceecCCCCCHHHHHHHHHHhhc-----CCCccccccChhhHHHHHHHHHHHHHHcCCC-CCCccCCCcceEEcCCchH
Q 038818 75 YYFAYFPSSGSIAGFLGEMLSSGF-----NVVGFNWMSSPAATELENIVMDWLGEMLKLP-KSFLFSGTGGGVIQGTTCE 148 (486)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~-~~~~~~~~~~~~~t~ggt~ 148 (486)
-||++-.+++.+..++ +.+..++ |+....+..++.+.....++++.+++++|.+ ++ ..++|+|+|+
T Consensus 25 iYld~a~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~-------~v~~t~g~t~ 96 (406)
T PRK09295 25 AYLDSAASAQKPSQVI-DAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAE-------ELVFVRGTTE 96 (406)
T ss_pred EEEeCcccccCCHHHH-HHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCC-------eEEEeCCHHH
Confidence 5888876666555544 4433333 2222334445556677778999999999984 33 6899999999
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH----HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHH
Q 038818 149 AILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA----LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLD 224 (486)
Q Consensus 149 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~ 224 (486)
++..++.......+ .+++.|+++...|++ +...++..|+ +++.+|+++ ++.+|+++|+++++++
T Consensus 97 ~l~~~~~~~~~~~~-------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~i~~~ 164 (406)
T PRK09295 97 GINLVANSWGNSNV-------RAGDNIIISEMEHHANIVPWQMLCARVGA---ELRVIPLNP--DGTLQLETLPALFDER 164 (406)
T ss_pred HHHHHHHHhhhhcC-------CCcCEEEECcchhhHHHHHHHHHHHHcCc---EEEEEecCC--CCCCCHHHHHHhcCCC
Confidence 98766554321111 156678889999876 3456677898 999999875 5689999999998654
Q ss_pred HHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC
Q 038818 225 IQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL 304 (486)
Q Consensus 225 ~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~ 304 (486)
+.+|++++++|++|.+.|+++|+++|+++|++++||++|+.+....+ ... .++|++++++||+ ++|.
T Consensus 165 ------t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~-~~~-----~~~D~~~~s~~K~-~gp~ 231 (406)
T PRK09295 165 ------TRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVD-VQA-----LDCDFYVFSGHKL-YGPT 231 (406)
T ss_pred ------cEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccC-chh-----cCCCEEEeehhhc-cCCC
Confidence 34889999999999999999999999999999999999977654332 111 2689999999995 5688
Q ss_pred cceEEEeeCchHHHHHhcCCcccccCccC-CC---CCccCC--CCccccCCCC-C-CchHHHHHHHHhchHHHHHHHHHH
Q 038818 305 DCCCLWVKNPNALIKALSTNPEFLRNKAS-DS---KQVVDY--KDWQITLSRR-F-RALKLWLVLRSFGVANLRNFLRSH 376 (486)
Q Consensus 305 ~~g~~~~~~~~~~~~~~~~~~~y~~~~~~-~~---~~~~~~--~~~~~~~sr~-~-~~l~~~~~l~~~g~~g~~~~~~~~ 376 (486)
|+|+++++++. +.. + +++..+... .. .....+ ....++.|.+ . ..+++..+++.+...|++++.++.
T Consensus 232 G~G~l~~~~~~-~~~-~---~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~ 306 (406)
T PRK09295 232 GIGILYVKEAL-LQE-M---PPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYE 306 (406)
T ss_pred CcEEEEEchHh-Hhh-C---CCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 99999997653 221 1 223222110 00 000000 1112222222 1 235667777777666888888999
Q ss_pred HHHHHHHHHHHhCCCCeEEecCC-CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeee--------e
Q 038818 377 VRMAQLFQELVGGDNRFEIVAPR-NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHG--------M 447 (486)
Q Consensus 377 ~~~a~~l~~~L~~~~~~~~~~~~-~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--------~ 447 (486)
.++++++.+.|++++++++..+. ..++++|.+.... ...+.+.|.+.|+.+-++. .
T Consensus 307 ~~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~~~---------------~~~~~~~L~~~gI~v~~g~~c~~~~~~~ 371 (406)
T PRK09295 307 QNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHH---------------AYDVGSFLDNYGIAVRTGHHCAMPLMAY 371 (406)
T ss_pred HHHHHHHHHHHhcCCCEEEeCCCCCceEEEEEECCcC---------------HHHHHHHHHhCCeEEeccccchHHHHHH
Confidence 99999999999999999998653 4678899875321 2245556666676432211 0
Q ss_pred ECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 448 VAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 448 ~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
....+++|+|+ ++++|++|||+++++|+++..
T Consensus 372 ~~~~~~iRiS~-~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 372 YNVPAMCRASL-AMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred HCCCCEEEEEc-cCCCCHHHHHHHHHHHHHHHH
Confidence 11135799999 578999999999999998765
No 25
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.97 E-value=1.4e-28 Score=248.92 Aligned_cols=355 Identities=13% Similarity=0.079 Sum_probs=242.7
Q ss_pred CCcceecCCCCCHHHHHHHHHHhhcCC-----CccccccChhhHHHHHHHHHHHHHHcCC-CCCCccCCCcceEEcCCch
Q 038818 74 PYYFAYFPSSGSIAGFLGEMLSSGFNV-----VGFNWMSSPAATELENIVMDWLGEMLKL-PKSFLFSGTGGGVIQGTTC 147 (486)
Q Consensus 74 p~~~~~~~~~~~~~~~~~~~l~~~~n~-----~~~~~~~~~~~~~le~~~~~~l~~l~g~-~~~~~~~~~~~~~~t~ggt 147 (486)
..||++-..++.+..++ +.+..++.. ....+..+....+...++++.+++++|. +++ .+++++|+|
T Consensus 20 ~~yld~a~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~-------~i~~~~~~t 91 (401)
T PRK10874 20 GVYLDSAATALKPQAVI-EATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAK-------NIVWTRGTT 91 (401)
T ss_pred eEEEeCCcccCCCHHHH-HHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCC-------EEEEECCHH
Confidence 35788876665554443 444444421 1122233445567777899999999999 443 788999999
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH----HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHH
Q 038818 148 EAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA----LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDL 223 (486)
Q Consensus 148 ~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~ 223 (486)
+++..++.......+ .++..|+++...|++ +...++..|+ +++.+|++. ++.+|++++++++++
T Consensus 92 ~~i~~~~~~~~~~~~-------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~i~~ 159 (401)
T PRK10874 92 ESINLVAQSYARPRL-------QPGDEIIVSEAEHHANLVPWLMVAQQTGA---KVVKLPLGA--DRLPDVDLLPELITP 159 (401)
T ss_pred HHHHHHHHHhhhccC-------CCcCEEEECCcchHHHHHHHHHHHHHhCC---EEEEEecCC--CCcCCHHHHHHhcCc
Confidence 988766555421000 156788899999976 4566778899 999999875 568999999999976
Q ss_pred HHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC
Q 038818 224 DIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT 303 (486)
Q Consensus 224 ~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p 303 (486)
++ .+|++++++|++|.+.|+++|+++|+++|++++||++|+.+....+ .. .+ ++|.+++++||+ ++|
T Consensus 160 ~t------~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~-~~----~~-~~d~~~~s~~K~-~gp 226 (401)
T PRK10874 160 RT------RILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPAD-VQ----AL-DIDFYAFSGHKL-YGP 226 (401)
T ss_pred Cc------EEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCC-ch----hc-CCCEEEEecccc-cCC
Confidence 43 4788999999999999999999999999999999999975544322 11 12 689999999995 468
Q ss_pred CcceEEEeeCchHHHHHhcCCcccccCccC-C--CCCccCC--CCccccCCCC--CCchHHHHHHHHhchHHHHHHHHHH
Q 038818 304 LDCCCLWVKNPNALIKALSTNPEFLRNKAS-D--SKQVVDY--KDWQITLSRR--FRALKLWLVLRSFGVANLRNFLRSH 376 (486)
Q Consensus 304 ~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~-~--~~~~~~~--~~~~~~~sr~--~~~l~~~~~l~~~g~~g~~~~~~~~ 376 (486)
.|+|+++++++ .+.. + .++...... . ......+ ..+.++.|.. ...+++..++..+...++.+..++.
T Consensus 227 ~G~G~l~~~~~-~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~ 301 (401)
T PRK10874 227 TGIGVLYGKSE-LLEA-M---SPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWS 301 (401)
T ss_pred CccEEEEEchH-HHhc-C---CCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 89999998754 2221 1 122211100 0 0000000 1112222222 1335666677766667777888889
Q ss_pred HHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeE--------
Q 038818 377 VRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMV-------- 448 (486)
Q Consensus 377 ~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-------- 448 (486)
.++++++.+.|+++|++++..++..++++|.+.+.. ..++.+.|.++|+.+.++...
T Consensus 302 ~~l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~~---------------~~~~~~~L~~~gI~v~~g~~~~~~~~~~~ 366 (401)
T PRK10874 302 RSLATLAEDALAKLPGFRSFRCQDSSLLAFDFAGVH---------------HSDLVTLLAEYGIALRAGQHCAQPLLAAL 366 (401)
T ss_pred HHHHHHHHHHHhcCCCEEEeCCCCCcEEEEEECCcC---------------HHHHHHHHHHCCcEEeccccchHHHHHHh
Confidence 999999999999999999887777788888865321 235666777778754332211
Q ss_pred CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 449 AGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 449 ~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
...+++|+|++ ..+|++|||+++++|+++++.+
T Consensus 367 g~~~~iRiS~~-~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 367 GVTGTLRASFA-PYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred CCCCEEEEEec-ccCCHHHHHHHHHHHHHHHHHh
Confidence 12468999996 5678889999999999988765
No 26
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.97 E-value=1e-28 Score=249.70 Aligned_cols=354 Identities=14% Similarity=0.070 Sum_probs=240.8
Q ss_pred CcceecCCCCCHHHHHHHHHHhhcC-----CCccccccChhhHHHHHHHHHHHHHHcCCC-CCCccCCCcceEEcCCchH
Q 038818 75 YYFAYFPSSGSIAGFLGEMLSSGFN-----VVGFNWMSSPAATELENIVMDWLGEMLKLP-KSFLFSGTGGGVIQGTTCE 148 (486)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~n-----~~~~~~~~~~~~~~le~~~~~~l~~l~g~~-~~~~~~~~~~~~~t~ggt~ 148 (486)
-||++-..++.+.. +.+.+..++. +....+..++...+...++++.+++++|.+ ++ .+++|+|+|+
T Consensus 18 iyld~a~~~~~p~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~-------~i~~t~g~t~ 89 (398)
T TIGR03392 18 VYLDSAATALKPQA-VIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAE-------NIVWTRGTTE 89 (398)
T ss_pred EEeeCccccCCCHH-HHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCC-------eEEEeCChHH
Confidence 57787766554444 4444444432 111223334445566678999999999985 33 6899999999
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH----HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHH
Q 038818 149 AILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA----LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLD 224 (486)
Q Consensus 149 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~ 224 (486)
++..++........ .+++.|+++..+|++ +...++..|+ +++.+|+++ ++.+|+++|++++++.
T Consensus 90 ~l~~~~~~~~~~~~-------~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~--~~~~~~~~l~~~i~~~ 157 (398)
T TIGR03392 90 SINLVAQSYARPRL-------QPGDEIIVSEAEHHANLIPWLMVAQQTGA---KVVKLPIGA--DLLPDIRQLPELLTPR 157 (398)
T ss_pred HHHHHHHHhhhccC-------CCCCEEEECCcchhHHHHHHHHHHHHcCc---EEEEEecCC--CCCcCHHHHHHHhccC
Confidence 98776665421100 156788899999987 3456788899 999999975 4689999999998764
Q ss_pred HHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC
Q 038818 225 IQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL 304 (486)
Q Consensus 225 ~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~ 304 (486)
+ .+|++++++|++|.+.|+++|+++|+++|+++++|++|+.+....+ .. .+ ++|.+++++||++ +|.
T Consensus 158 t------~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~-~~----~~-~~d~~~~s~~K~~-gp~ 224 (398)
T TIGR03392 158 T------RILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPD-VQ----AL-DIDFYAFSGHKLY-GPT 224 (398)
T ss_pred c------eEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCC-hh----hc-CCCEEEEeccccc-CCC
Confidence 3 4788899999999999999999999999999999999976543321 11 11 6899999999955 588
Q ss_pred cceEEEeeCchHHHHHhcCCcccccCccC---CCCCccCC--CCccccCCCC-C-CchHHHHHHHHhchHHHHHHHHHHH
Q 038818 305 DCCCLWVKNPNALIKALSTNPEFLRNKAS---DSKQVVDY--KDWQITLSRR-F-RALKLWLVLRSFGVANLRNFLRSHV 377 (486)
Q Consensus 305 ~~g~~~~~~~~~~~~~~~~~~~y~~~~~~---~~~~~~~~--~~~~~~~sr~-~-~~l~~~~~l~~~g~~g~~~~~~~~~ 377 (486)
|+|+++++++ .+. .+ +++...... .....+.+ ..+.++.|.. . ..+++..+++.+...|++++.++..
T Consensus 225 G~G~l~~~~~-~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~ 299 (398)
T TIGR03392 225 GIGVLYGKTE-LLE-AM---PPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSV 299 (398)
T ss_pred ceEEEEEcHH-HHh-hC---CCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 9999987754 222 11 122211100 00000000 0112222222 1 3356677777766667888889999
Q ss_pred HHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeee--------EC
Q 038818 378 RMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGM--------VA 449 (486)
Q Consensus 378 ~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------~~ 449 (486)
++++++.+.|+++|++++..++..++++|.+.+.. .+.+.+.|.++|+.+-++.. +.
T Consensus 300 ~l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~~---------------~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g 364 (398)
T TIGR03392 300 SLADLAEERLAQLPGFRSFRCPGSSLLAFDFAGVH---------------HSDLAALLAESGIALRAGQHCAQPLMAALG 364 (398)
T ss_pred HHHHHHHHHHhcCCCeEEeCCCCCcEEEEEeCCcC---------------HHHHHHHHHhCCEEEecCccchHHHHHHhC
Confidence 99999999999999999876666788888865321 23566667777764332221 11
Q ss_pred CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 450 GIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 450 ~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
..+++|+|++ ..+|++|||+++++|+++++.+
T Consensus 365 ~~~~iRvS~~-~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 365 VSGTLRASFA-PYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred CCCEEEEEee-ccCCHHHHHHHHHHHHHHHHHh
Confidence 2468999995 5788889999999999988764
No 27
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.97 E-value=1e-28 Score=247.78 Aligned_cols=318 Identities=14% Similarity=0.114 Sum_probs=223.6
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCC-CCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCc
Q 038818 104 NWMSSPAATELENIVMDWLGEMLKLP-KSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTH 182 (486)
Q Consensus 104 ~~~~~~~~~~le~~~~~~l~~l~g~~-~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 182 (486)
.+..++.......++++++++++|.+ +. .+++|+|+|+++..++.+.... ..++..|+++..+|
T Consensus 34 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~-------~v~~~~g~t~a~~~~~~~l~~~--------~~~g~~vl~~~~~~ 98 (373)
T cd06453 34 VHELSARATDAYEAAREKVARFINAPSPD-------EIIFTRNTTEAINLVAYGLGRA--------NKPGDEIVTSVMEH 98 (373)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCCCCC-------eEEEeCCHHHHHHHHHHHhhhc--------CCCCCEEEECcchh
Confidence 44556667788888999999999987 33 6889999999987777665431 01456788899999
Q ss_pred hHH----HHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHH
Q 038818 183 SAL----QKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKR 258 (486)
Q Consensus 183 ~s~----~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~ 258 (486)
++. ...++..|+ +++.||++. ++.+|+++|++++.++ +.+|++++++|++|.+.|+++|.++|++
T Consensus 99 ~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~------~~~v~~~~~~~~tG~~~~~~~i~~~~~~ 167 (373)
T cd06453 99 HSNIVPWQQLAERTGA---KLKVVPVDD--DGQLDLEALEKLLTER------TKLVAVTHVSNVLGTINPVKEIGEIAHE 167 (373)
T ss_pred HHHHHHHHHHHhhcCc---EEEEeecCC--CCCcCHHHHHHHhcCC------ceEEEEeCcccccCCcCCHHHHHHHHHH
Confidence 884 445567788 999999874 5689999999998753 3478899999999999999999999999
Q ss_pred hCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCC--
Q 038818 259 YSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSK-- 336 (486)
Q Consensus 259 ~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~-- 336 (486)
+|+|+|+|++++.+....+ ... .++|++++++|||+++ .++|+++++++ ... .+. ++..+......
T Consensus 168 ~~~~li~D~a~~~~~~~~~-~~~-----~~~d~~~~s~~K~~~~-~g~g~~~~~~~-~~~-~~~---~~~~g~~~~~~~~ 235 (373)
T cd06453 168 AGVPVLVDGAQSAGHMPVD-VQD-----LGCDFLAFSGHKMLGP-TGIGVLYGKEE-LLE-EMP---PYGGGGEMIEEVS 235 (373)
T ss_pred cCCEEEEEhhhhcCceeee-ccc-----cCCCEEEeccccccCC-CCcEEEEEchH-Hhh-cCC---CeecCCCcccccc
Confidence 9999999999976554322 111 1689999999999987 78898888754 222 121 11111000000
Q ss_pred -CccCCC--CccccCCCC--CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC--CeeEEEEEee
Q 038818 337 -QVVDYK--DWQITLSRR--FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR--NFAVVCFRVL 409 (486)
Q Consensus 337 -~~~~~~--~~~~~~sr~--~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~--~~~~v~f~~~ 409 (486)
....+. ...+..+.. ...++++.+++.+..++++++.++..++++++.+.|+++++++++.++ ..++++|.+.
T Consensus 236 ~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 315 (373)
T cd06453 236 FEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLE 315 (373)
T ss_pred ccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEEC
Confidence 000000 001111111 134677888888888889999999999999999999999899987543 3567788764
Q ss_pred cCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeee--------ECCEeEEEEEecCCCCcHHHHHHHHHHH
Q 038818 410 PSASGLGDGKANEGANELNRKLLESINASGQLYVSHGM--------VAGIYFIRFAVGATLTEDRHVIAAWKVV 475 (486)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------~~~~~~lR~~~~~~~tt~~did~~i~~l 475 (486)
.. ...++.+.|.++|+.+-++.. .....++|+++. +.+|++|+|+++++|
T Consensus 316 ~~---------------~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~-~~~t~~di~~~~~~l 373 (373)
T cd06453 316 GI---------------HPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFG-LYNTEEEIDALVEAL 373 (373)
T ss_pred Cc---------------CHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEec-CCCCHHHHHHHHhhC
Confidence 21 123567777777874322211 112468999995 678888999999864
No 28
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.97 E-value=2.1e-28 Score=247.99 Aligned_cols=355 Identities=16% Similarity=0.118 Sum_probs=237.7
Q ss_pred CcceecCCCCCHHHHHHHHHHhhc-----CCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHH
Q 038818 75 YYFAYFPSSGSIAGFLGEMLSSGF-----NVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEA 149 (486)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a 149 (486)
.|+++-..++.+.. +.+.+..++ |++...+..++.......++++.+++++|.+.. ..+++|+|+|++
T Consensus 20 ~yld~~~~~~~p~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~------~~v~~~~g~t~~ 92 (403)
T TIGR01979 20 VYLDSAATSQKPQQ-VIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASD------EEIVFTRGTTES 92 (403)
T ss_pred EEEeCccccCCCHH-HHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCC------CeEEEeCCHHHH
Confidence 46666655544443 345554443 222222333444555666888999999999732 168999999998
Q ss_pred HHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHH----HHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHH
Q 038818 150 ILCTLAAARDQILNEIGRENISRLVVYGSDQTHSAL----QKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDI 225 (486)
Q Consensus 150 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~----~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~ 225 (486)
+..++.+...... .+++.|+++...|+|. .+.++..|+ +++.+|+++ ++.+|+++|++++.+.
T Consensus 93 l~~~~~~~~~~~~-------~~g~~vl~~~~~~~s~~~~~~~~~~~~g~---~~~~v~~~~--~~~~~~~~l~~~i~~~- 159 (403)
T TIGR01979 93 INLVAYSWGDSNL-------KAGDEIVISEMEHHANIVPWQLLAERTGA---TLKFIPLDD--DGTLDLDDLEKLLTEK- 159 (403)
T ss_pred HHHHHHHhhhhcC-------CCCCEEEECcchhhHHHHHHHHHHHhcCc---EEEEEecCC--CCCCCHHHHHHHhccC-
Confidence 7665554322110 1567888999999874 456677898 999999985 5689999999998654
Q ss_pred HCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCc
Q 038818 226 QAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD 305 (486)
Q Consensus 226 ~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~ 305 (486)
+.+|++++++|++|.+.|+++|+++|+++|+++|+|++|+.+....+ .. . .++|++++++||++ +|.|
T Consensus 160 -----~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~-~~----~-~~~d~~~~s~~K~~-gp~G 227 (403)
T TIGR01979 160 -----TKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVD-VQ----A-LDCDFYVFSGHKMY-GPTG 227 (403)
T ss_pred -----CeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccC-cc----c-cCCCEEEEeccccc-CCCC
Confidence 45788999999999999999999999999999999999977654322 11 1 16899999999976 5889
Q ss_pred ceEEEeeCchHHHHHhcCCcccccCccC-CCCC----ccCCCCccccCCCC-C-CchHHHHHHHHhchHHHHHHHHHHHH
Q 038818 306 CCCLWVKNPNALIKALSTNPEFLRNKAS-DSKQ----VVDYKDWQITLSRR-F-RALKLWLVLRSFGVANLRNFLRSHVR 378 (486)
Q Consensus 306 ~g~~~~~~~~~~~~~~~~~~~y~~~~~~-~~~~----~~~~~~~~~~~sr~-~-~~l~~~~~l~~~g~~g~~~~~~~~~~ 378 (486)
+|+++++++ ... .+ .++..+... .... .+....+.++.+.+ . ..++++.+++.+...|++++.++..+
T Consensus 228 ~g~l~~~~~-~~~-~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~ 302 (403)
T TIGR01979 228 IGVLYGKEE-LLE-QM---PPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHE 302 (403)
T ss_pred ceEEEEchH-HHh-cC---CCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 999998754 222 11 112211100 0000 00000111222222 1 23566667776656678888999999
Q ss_pred HHHHHHHHHhCCCCeEEecCC----CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeee--------
Q 038818 379 MAQLFQELVGGDNRFEIVAPR----NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHG-------- 446 (486)
Q Consensus 379 ~a~~l~~~L~~~~~~~~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-------- 446 (486)
+++++.+.|+++++++++.++ ..++++|.+.+.. ...+.+.|.+.|+.+-.+.
T Consensus 303 l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~~---------------~~~~~~~L~~~gI~v~~g~~~~~~~~~ 367 (403)
T TIGR01979 303 LTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEGVH---------------PHDVGTILDEEGIAVRSGHHCAQPLMR 367 (403)
T ss_pred HHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCCcC---------------HHHHHHHHhhCCEEEcchhhhhHHHHH
Confidence 999999999999999998654 3678888875321 2345566667776432211
Q ss_pred eECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 447 MVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 447 ~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
.+...+++|+++. +.+|++||++++++|+++++.+
T Consensus 368 ~~~~~~~iRiS~~-~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 368 RFGVPATCRASFY-IYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred HhCCCCEEEEEec-cCCCHHHHHHHHHHHHHHHHHh
Confidence 1112468999984 7789999999999999987764
No 29
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.97 E-value=1.1e-28 Score=247.74 Aligned_cols=311 Identities=13% Similarity=0.140 Sum_probs=220.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH----H
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ----K 187 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~----~ 187 (486)
.....++++++++++|.+... .+++|+|+|+++..++..... ++..|+++..+|.++. .
T Consensus 43 ~~~~~~~~~~la~~~~~~~~~------~v~~~~g~t~al~~~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~~ 105 (376)
T TIGR01977 43 SREVEETRQLLAKLFNAPSSA------HVVFTNNATTALNIALKGLLK-----------EGDHVITTPMEHNSVARPLEC 105 (376)
T ss_pred HHHHHHHHHHHHHHhCcCCCC------eEEEeCCHHHHHHHHHHhccC-----------CCCEEEECcchhhHHHHHHHH
Confidence 456677889999999986532 688999999988766654221 5677888888998854 4
Q ss_pred HHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeec
Q 038818 188 AAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDA 267 (486)
Q Consensus 188 a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~ 267 (486)
.++..|+ +++.++++. ++.+|+++|++++++. +.+|++++++|++|.+.|+++|.++|+++|++++||+
T Consensus 106 ~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~~~~~------~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~ 174 (376)
T TIGR01977 106 LKEQIGV---EITIVKCDN--EGLISPERIKRAIKTN------TKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDA 174 (376)
T ss_pred HHHHcCc---EEEEEecCC--CCCcCHHHHHHhcCCC------CeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEh
Confidence 4566688 999999875 5689999999998643 4578899999999999999999999999999999999
Q ss_pred cccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCcccc
Q 038818 268 AYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQIT 347 (486)
Q Consensus 268 a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 347 (486)
|++.+....+- . -.++|++++++|||+++|.|+|+++++++..+.........+ ..... .........++
T Consensus 175 a~~~g~~~~~~-~-----~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~r~~ 244 (376)
T TIGR01977 175 AQTAGVIPIDM-T-----ELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTGS-HSALI---DQPSELPDRFE 244 (376)
T ss_pred hhccCccCCCc-h-----hcCCCEEEecccccccCCCCceEEEEcCCcCcCceecCCCcc-ccccc---cccccchhhcc
Confidence 99877654431 1 137999999999999999999999998875321111100000 00000 00000000111
Q ss_pred CCCC--CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC----CeeEEEEEeecCCCCCCCCCCc
Q 038818 348 LSRR--FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR----NFAVVCFRVLPSASGLGDGKAN 421 (486)
Q Consensus 348 ~sr~--~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~----~~~~v~f~~~~~~~~~~~~~~~ 421 (486)
.+.. ...++++.+++.+...|++.+.++..++++++.+.|.+.+++++..+. ..++++|...+..
T Consensus 245 ~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------- 315 (376)
T TIGR01977 245 SGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGID--------- 315 (376)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCCC---------
Confidence 1111 123566677777878888999999999999999999998999988642 3568888874321
Q ss_pred cchHHHHHHHHHHHHhc-CcEEEeeeeE-----------CCEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 038818 422 EGANELNRKLLESINAS-GQLYVSHGMV-----------AGIYFIRFAVGATLTEDRHVIAAWKVVQE 477 (486)
Q Consensus 422 ~~~~~~~~~l~~~l~~~-g~~~~~~~~~-----------~~~~~lR~~~~~~~tt~~did~~i~~l~~ 477 (486)
...+.+.|.+. |+. +..... .....+|+++ +..+|++||++++++|++
T Consensus 316 ------~~~~~~~L~~~~gi~-v~~g~~~~~~~~~~~g~~~~~~iRis~-~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 316 ------SEEVADILDEKFDIA-TRTGLHCAPLAHKTIGTFATGTIRLSL-GYFNTEEEIEKLLEALSE 375 (376)
T ss_pred ------HHHHHHHHhccCCEE-EEcccccchHHHHHhCCCCCCeEEEec-CCCCCHHHHHHHHHHHhh
Confidence 23566677665 653 332211 1346899998 578899999999999975
No 30
>PLN02651 cysteine desulfurase
Probab=99.97 E-value=1.3e-28 Score=245.69 Aligned_cols=328 Identities=12% Similarity=0.118 Sum_probs=222.4
Q ss_pred cceecCCCCCHHHHHHHHHHhhc-----CCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHH
Q 038818 76 YFAYFPSSGSIAGFLGEMLSSGF-----NVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAI 150 (486)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~ 150 (486)
||++-..++.++.++ +.+..++ |+....+..++.+.++..++++.+++++|.+++ ..++|+|+|+++
T Consensus 2 Yld~a~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~v~~t~~~t~a~ 73 (364)
T PLN02651 2 YLDMQATTPIDPRVL-DAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPK-------EIIFTSGATESN 73 (364)
T ss_pred cccCcCCCCCCHHHH-HHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCCHHHHH
Confidence 556655545444443 3333332 221112223455567777899999999998765 689999999999
Q ss_pred HHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH---HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHC
Q 038818 151 LCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ---IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQA 227 (486)
Q Consensus 151 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~---~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~ 227 (486)
..++..+.....+ ++..|+++...|+++...+. ..|+ +++.+|+++ ++.+|+++|+++|++++
T Consensus 74 ~~~l~~~~~~~~~-------~g~~vl~~~~~h~s~~~~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~i~~~t-- 139 (364)
T PLN02651 74 NLAIKGVMHFYKD-------KKKHVITTQTEHKCVLDSCRHLQQEGF---EVTYLPVKS--DGLVDLDELAAAIRPDT-- 139 (364)
T ss_pred HHHHHHHHHhccC-------CCCEEEEcccccHHHHHHHHHHHhcCC---EEEEEccCC--CCcCCHHHHHHhcCCCc--
Confidence 8888776543211 45678889999998766544 3477 899999875 56899999999997643
Q ss_pred CCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcce
Q 038818 228 GLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCC 307 (486)
Q Consensus 228 g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g 307 (486)
.+|++++++|++|.+.|+++|+++|+++|+++|||++++.+....+- . .+ ++|++++++||| ++|.|+|
T Consensus 140 ----~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~-~----~~-~~D~~~~s~hK~-~gp~G~g 208 (364)
T PLN02651 140 ----ALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDV-D----DL-GVDLMSISGHKI-YGPKGVG 208 (364)
T ss_pred ----EEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCc-c----cC-CCCEEEechhhh-CCCCceE
Confidence 47889999999999999999999999999999999999887665431 1 12 689999999998 6899999
Q ss_pred EEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH
Q 038818 308 CLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQEL 386 (486)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~ 386 (486)
+++++++... ...+.+..+. . . ..+ ..++... ..+++..++..+- ++.+++.++..++++++.+.
T Consensus 209 ~l~v~~~~~~----~l~p~~~g~~-~------~-~~~-~~GT~~~~~~~~l~~al~~~~-~~~~~i~~~~~~l~~~l~~~ 274 (364)
T PLN02651 209 ALYVRRRPRV----RLEPLMSGGG-Q------E-RGR-RSGTENTPLVVGLGAACELAM-KEMDYDEKHMKALRERLLNG 274 (364)
T ss_pred EEEEcCCCCC----CCCccccCCC-c------c-CCc-cCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHH
Confidence 9999976331 1122221111 0 0 000 0122221 2345566666654 34578889999999999999
Q ss_pred HhC-CCCeEEecC--CC---eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeee-------------
Q 038818 387 VGG-DNRFEIVAP--RN---FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGM------------- 447 (486)
Q Consensus 387 L~~-~~~~~~~~~--~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~------------- 447 (486)
|++ +|+++++.+ +. .++++|.+.+.. .+.+.++|.+ ++++.+.
T Consensus 275 l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~---------------~~~~~~~L~~---i~v~~g~~c~~~~~~~~~~~ 336 (364)
T PLN02651 275 LRAKLGGVRVNGPRDPEKRYPGTLNLSFAYVE---------------GESLLMGLKE---VAVSSGSACTSASLEPSYVL 336 (364)
T ss_pred HHhhCCCEEEECCCCcccCcCCEEEEEeCCCC---------------HHHHHHHhCC---EEEEchhhcCCCCCCcCHHH
Confidence 985 689999875 22 358888875321 2244444432 2332211
Q ss_pred --EC-----CEeEEEEEecCCCCcHHHHH
Q 038818 448 --VA-----GIYFIRFAVGATLTEDRHVI 469 (486)
Q Consensus 448 --~~-----~~~~lR~~~~~~~tt~~did 469 (486)
+. ..+.+|+|+ +++||++|||
T Consensus 337 ~~~g~~~~~~~~~vR~S~-~~~~t~~did 364 (364)
T PLN02651 337 RALGVPEEMAHGSLRLGV-GRFTTEEEVD 364 (364)
T ss_pred HHcCCChHHhCceEEEEc-CCCCCHHHcC
Confidence 01 136899999 5788988985
No 31
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.97 E-value=1.5e-28 Score=248.35 Aligned_cols=347 Identities=14% Similarity=0.143 Sum_probs=227.2
Q ss_pred CCcceecCCCCCHHHHHHHHHHhhc-----CCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchH
Q 038818 74 PYYFAYFPSSGSIAGFLGEMLSSGF-----NVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCE 148 (486)
Q Consensus 74 p~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~ 148 (486)
+.||++-..++.++.++ +.+..++ |+....+..+.......+++++.+++++|.+++ ..++++|+|+
T Consensus 4 ~~yld~aa~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~v~~~~g~t~ 75 (402)
T TIGR02006 4 PIYLDYAATTPVDPRVA-EKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSR-------EIVFTSGATE 75 (402)
T ss_pred cEEeeCCcCCCCCHHHH-HHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCCHHH
Confidence 45788876666555544 3333333 221111112222345566788999999998765 6899999999
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH---cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHH
Q 038818 149 AILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI---AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDI 225 (486)
Q Consensus 149 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~---~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~ 225 (486)
++..++........ .++..|+++..+|+++..++.. .|+ +++.+|+++ ++.+|+++|++++++.
T Consensus 76 a~~~~l~~l~~~~~-------~~g~~Vi~~~~~h~s~~~~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~l~~~- 142 (402)
T TIGR02006 76 SNNLAIKGIAHFYK-------SKGNHIITSKTEHKAVLDTCRYLEREGF---EVTYLPPKS--NGLIDLEELKAAIRDD- 142 (402)
T ss_pred HHHHHHHHHHHhhc-------CCCCEEEECCCccHHHHHHHHHHHhcCC---EEEEEccCC--CCcCCHHHHHHhcCCC-
Confidence 99887766543111 1567788999999998776543 477 899999875 5689999999988653
Q ss_pred HCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCc
Q 038818 226 QAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD 305 (486)
Q Consensus 226 ~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~ 305 (486)
+.+|++++++|++|.+.|+++|+++|+++|+++|||++++.+....+- . . .++|++++++||++ +|.|
T Consensus 143 -----~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~-~----~-~~~D~~~~s~~K~~-gp~G 210 (402)
T TIGR02006 143 -----TILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINV-N----E-LKVDLMSISGHKIY-GPKG 210 (402)
T ss_pred -----CEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCc-c----c-cCCCEEEEehhhhc-CCCc
Confidence 347889999999999999999999999999999999999876654321 1 1 27999999999975 5999
Q ss_pred ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCC-CCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHH
Q 038818 306 CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLS-RRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLF 383 (486)
Q Consensus 306 ~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~s-r~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l 383 (486)
+|+++++++.... ..+ ....... ...++.+ ... ..+++..+++.+ .++++++.++..++++++
T Consensus 211 ~G~l~~~~~~~~~----~~~-~~~g~~~---------~~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l 275 (402)
T TIGR02006 211 IGALYVRRKPRVR----LEA-LIHGGGH---------ERGMRSGTLPTHQIVGMGEAFRIA-KEEMAQDTAHVLALRDRL 275 (402)
T ss_pred eEEEEEccCCCCC----CCc-eecCCCc---------cCCccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHH
Confidence 9999998753311 111 1111000 0011111 111 123444455544 356788889999999999
Q ss_pred HHHHhCCCCeEEecCC--Ce-e--EEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeee-----eE-----
Q 038818 384 QELVGGDNRFEIVAPR--NF-A--VVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHG-----MV----- 448 (486)
Q Consensus 384 ~~~L~~~~~~~~~~~~--~~-~--~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-----~~----- 448 (486)
++.|++++++++.+++ .. + .++|...+. ..+...+.+.....|..+.+.. .+
T Consensus 276 ~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~~~-------------~~~~~~l~~i~v~~G~~c~~~~~~~~~~l~~lg~ 342 (402)
T TIGR02006 276 LNGIKSIEEVYLNGDLEHRVPGNLNVSFNYVEG-------------ESLIMALKDLAVSSGSACTSASLEPSYVLRALGI 342 (402)
T ss_pred HHHHhcCCCEEEeCCccccCCCeEEEEEeCcCH-------------HHHHHhcCCEEEechhhcCCCCCCccHHHHHcCC
Confidence 9999999898887532 22 2 344442110 2222222111112333221110 00
Q ss_pred ---CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 449 ---AGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 449 ---~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
...+++|+|+ ++.+|++|||++++.|+++++++
T Consensus 343 ~~~~~~~~vR~S~-~~~~t~edid~l~~~l~~~~~~~ 378 (402)
T TIGR02006 343 NDELAHSSIRFTI-GRFTTEEEIDYAVKLVKSAIDKL 378 (402)
T ss_pred ChhhcCceEEEEe-cCCCCHHHHHHHHHHHHHHHHHH
Confidence 0136899999 56799999999999999998765
No 32
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.97 E-value=7.4e-28 Score=240.23 Aligned_cols=307 Identities=16% Similarity=0.137 Sum_probs=212.2
Q ss_pred CCCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHHHHH-------HhhcCCC------ccccccChh
Q 038818 44 ESAPYNPEPIETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGEML-------SSGFNVV------GFNWMSSPA 110 (486)
Q Consensus 44 ~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l-------~~~~n~~------~~~~~~~~~ 110 (486)
..+|++|.+.+.|...|.++-.- +|.+|.+.+--+---.-+.+.++ ....+.. +..-..++.
T Consensus 28 ~~~p~~g~~~~~i~~~l~~l~~~-----~~~~~~~~~~~gere~rv~~~~~~~~~~~~~hgigr~~~l~~~q~ka~gss~ 102 (444)
T TIGR03531 28 RKIPEEGWDDETIELFLHELSVM-----DTNNFPNNVGVGEREGRVFSKLVARRHYRFCHGIGRSGDLVAPQPKAAGSSL 102 (444)
T ss_pred CcCCccCCCHHHHHHHHHHHhcC-----CcCCCccccCcCcccceeechhhhhcccceecCCCCcccccccCccccCccH
Confidence 46899999999999888875322 23334432211100000011111 1111111 111224556
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCch-HHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHH
Q 038818 111 ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTC-EAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAA 189 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt-~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~ 189 (486)
...+..++.+++++++|.+... .++++++|| +++.+++.+++.+ +.++..|+++..+|+|+.+++
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~------~a~~v~~~Tg~al~laL~alr~~--------~~~gd~VI~p~~th~S~~kAi 168 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIK------SAFVVPLATGMSLSLCLSALRHK--------RPKAKYVIWPRIDQKSCIKAI 168 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCC------EEEEECCHHHHHHHHHHHHcCCc--------CCCCCEEEEECcChHHHHHHH
Confidence 7889999999999999998431 478899999 7888888776642 012456667778999999999
Q ss_pred HHcCCCCCCeEEEec--CCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeec
Q 038818 190 QIAGIDPKNFRAIKT--TKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDA 267 (486)
Q Consensus 190 ~~~G~g~~~v~~v~~--d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~ 267 (486)
.++|+ +++.||+ ++ +++.+|+++|+++|++.+. ..+.+|+.+.+++..|..||+++|+++|++||+|+|+|+
T Consensus 169 ~~~G~---~pv~Vd~~~d~-~~~~iD~e~Le~aIt~~~~--kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDa 242 (444)
T TIGR03531 169 STAGF---EPRVIETVLDG-DELTTDVEDIERAIEEIGP--DNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNN 242 (444)
T ss_pred HHcCC---eEEEeeeeecC-cCCCcCHHHHHHHHHhccC--CCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEEC
Confidence 99999 9999995 33 4689999999999985321 224445555556666789999999999999999999999
Q ss_pred cccchhccCccchhhh-cCC--CCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCc
Q 038818 268 AYAGSACICPEFRHFI-DGI--EGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDW 344 (486)
Q Consensus 268 a~g~~~~~~~~~~~~~-~~~--~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 344 (486)
|||... +.....+ .+. ..+|++++|+||++.+|.++|++++++++....... .|....
T Consensus 243 Ayg~~~---~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~---~y~g~~------------- 303 (444)
T TIGR03531 243 AYGLQS---NKYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISK---SYPGRA------------- 303 (444)
T ss_pred cCcCcC---hhhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHH---hccCCC-------------
Confidence 998633 2222222 222 258999999999999999999999988877643221 121100
Q ss_pred cccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC---CeEEecCC
Q 038818 345 QITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDN---RFEIVAPR 399 (486)
Q Consensus 345 ~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~ 399 (486)
....++.+|+++..+|.+++++++++..++++++.+.|+++. +.+++..|
T Consensus 304 -----~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~ 356 (444)
T TIGR03531 304 -----SASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTP 356 (444)
T ss_pred -----CChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCC
Confidence 012357889999999999999999999999999999997652 55666444
No 33
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.96 E-value=3.6e-27 Score=240.15 Aligned_cols=355 Identities=16% Similarity=0.102 Sum_probs=235.8
Q ss_pred CCcceecCCCCCHHHHHHHHHHhhcC---CCc--cccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchH
Q 038818 74 PYYFAYFPSSGSIAGFLGEMLSSGFN---VVG--FNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCE 148 (486)
Q Consensus 74 p~~~~~~~~~~~~~~~~~~~l~~~~n---~~~--~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~ 148 (486)
..||++-..++ .|..+.+.+..++. .+. ..+..+........++++.+++++|.++.. ..++|+|+|+
T Consensus 33 ~iyLd~a~~~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~------~v~~t~g~t~ 105 (424)
T PLN02855 33 LVYLDNAATSQ-KPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSR------EIVFTRNATE 105 (424)
T ss_pred eEEeeCccccC-CCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCC------EEEEeCCHHH
Confidence 36788755544 33444455544432 121 111223334455567899999999996421 6899999999
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHH----HHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHH
Q 038818 149 AILCTLAAARDQILNEIGRENISRLVVYGSDQTHSAL----QKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLD 224 (486)
Q Consensus 149 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~----~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~ 224 (486)
++..++.......+ .+++.|+++...|++. ...++..|+ +++.+|+++ ++.+|+++|+++|++.
T Consensus 106 al~~i~~~~~~~~~-------~~gd~vl~~~~~~~s~~~~~~~~a~~~g~---~v~~v~~~~--~~~~~~~~l~~~i~~~ 173 (424)
T PLN02855 106 AINLVAYTWGLANL-------KPGDEVILSVAEHHSNIVPWQLVAQKTGA---VLKFVGLTP--DEVLDVEQLKELLSEK 173 (424)
T ss_pred HHHHHHHHhhhhcC-------CCcCEEEECCCccHHHHHHHHHHHHHcCC---EEEEEecCC--CCCcCHHHHHHHhccC
Confidence 97665543210000 1566788898988863 445677788 999999875 3479999999999753
Q ss_pred HHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC
Q 038818 225 IQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL 304 (486)
Q Consensus 225 ~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~ 304 (486)
+.+|++++++|++|.+.|+++|+++|+++|+++++|++|+.+....+ .. . .++|++++++||+ ++|.
T Consensus 174 ------t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~-~~----~-~~~d~~~~s~~K~-~gp~ 240 (424)
T PLN02855 174 ------TKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVD-VQ----T-LGADFLVASSHKM-CGPT 240 (424)
T ss_pred ------ceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCC-ch----h-cCCCEEEeecccc-cCCC
Confidence 34889999999999999999999999999999999999976544332 11 1 1589999999995 5688
Q ss_pred cceEEEeeCchHHHHHhcCCcccccCccCCCC---CccCCC--CccccCC-CC-CCchHHHHHHHHhchHHHHHHHHHHH
Q 038818 305 DCCCLWVKNPNALIKALSTNPEFLRNKASDSK---QVVDYK--DWQITLS-RR-FRALKLWLVLRSFGVANLRNFLRSHV 377 (486)
Q Consensus 305 ~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~---~~~~~~--~~~~~~s-r~-~~~l~~~~~l~~~g~~g~~~~~~~~~ 377 (486)
|+|+++++++. +. .+ +++..+...... ....+. ...++.| .. ...+++..++..+...|++++.++..
T Consensus 241 G~G~l~~~~~~-~~-~~---~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~ 315 (424)
T PLN02855 241 GIGFLWGKSDL-LE-SM---PPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEV 315 (424)
T ss_pred ccEEEEEchhh-hh-cC---CCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 99999998652 22 11 222211100000 000000 0011221 11 12245666677666668889999999
Q ss_pred HHHHHHHHHHhCCCCeEEecCC------CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhc-CcEEEeeee---
Q 038818 378 RMAQLFQELVGGDNRFEIVAPR------NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINAS-GQLYVSHGM--- 447 (486)
Q Consensus 378 ~~a~~l~~~L~~~~~~~~~~~~------~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~--- 447 (486)
++++++++.|+++++++++.+. ..++++|.+.... ...+.+.|.++ |+. +..+.
T Consensus 316 ~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~---------------~~~v~~~L~~~~gI~-v~~g~~c~ 379 (424)
T PLN02855 316 ELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGIH---------------PTDLSTFLDQQHGVA-IRSGHHCA 379 (424)
T ss_pred HHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCcC---------------HHHHHHHhcccCCEE-Eechhhhh
Confidence 9999999999999999998642 2478888875321 23566666666 653 33211
Q ss_pred ------ECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 448 ------VAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 448 ------~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
..-..++|+|+ ++.+|++|||+++++|++++..+
T Consensus 380 ~~~~~~~g~~~~iRiS~-~~ynt~~di~~l~~~l~~~~~~~ 419 (424)
T PLN02855 380 QPLHRYLGVNASARASL-YFYNTKEEVDAFIHALKDTIAFF 419 (424)
T ss_pred HHHHHHhCCCCeEEEEe-ccCCCHHHHHHHHHHHHHHHHHH
Confidence 11135799999 67889999999999999998765
No 34
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.96 E-value=1.2e-27 Score=238.48 Aligned_cols=343 Identities=13% Similarity=0.066 Sum_probs=232.3
Q ss_pred eecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHH
Q 038818 78 AYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAA 157 (486)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a 157 (486)
.|.+++...+..+.+.+...... ..++...++.+++++++++++|.+... ..++++|||+++..++.+.
T Consensus 2 ~~~~~~~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~~~~~la~~~g~~~~~------~~~~~~~~t~al~~~~~~~ 70 (356)
T cd06451 2 LLIPGPSNVPPRVLKAMNRPMLG-----HRSPEFLALMDEILEGLRYVFQTENGL------TFLLSGSGTGAMEAALSNL 70 (356)
T ss_pred cccCCCcCCCHHHHHHhCCCccC-----CCCHHHHHHHHHHHHHHHHHhcCCCCC------EEEEecCcHHHHHHHHHHh
Confidence 35566666666666666543211 235566777888999999999995432 5788999999987777654
Q ss_pred HHHHHHHccccCCCCeEEEecCCCchH--HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEE
Q 038818 158 RDQILNEIGRENISRLVVYGSDQTHSA--LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLC 235 (486)
Q Consensus 158 ~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv 235 (486)
.. ++..|+++...|++ +...++..|+ +++.+|+++ ++.+|++++++.+++. .|.+|+
T Consensus 71 ~~-----------~g~~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~~~~~l~~~i~~~-----~~~~v~ 129 (356)
T cd06451 71 LE-----------PGDKVLVGVNGVFGDRWADMAERYGA---DVDVVEKPW--GEAVSPEEIAEALEQH-----DIKAVT 129 (356)
T ss_pred CC-----------CCCEEEEecCCchhHHHHHHHHHhCC---CeEEeecCC--CCCCCHHHHHHHHhcc-----CCCEEE
Confidence 32 45667777778887 4577888999 999999875 4689999999999751 134788
Q ss_pred eecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCch
Q 038818 236 ATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPN 315 (486)
Q Consensus 236 ~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~ 315 (486)
+++++|++|.+.|+++|.++|+++|+++++|++|+.+....+. . . .++|.++.++|||+++|.|+|+++++++
T Consensus 130 i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~-~----~-~~~d~~~~s~~K~l~~p~g~G~l~~~~~- 202 (356)
T cd06451 130 LTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRM-D----E-WGVDVAYTGSQKALGAPPGLGPIAFSER- 202 (356)
T ss_pred EeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCccccc-c----c-cCccEEEecCchhccCCCCcceeEECHH-
Confidence 8899999999999999999999999999999998644332211 1 1 1689999999999999999999999765
Q ss_pred HHHHHhc--C-CcccccCccCCCCCccCCCCcc-ccC-CCCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhC
Q 038818 316 ALIKALS--T-NPEFLRNKASDSKQVVDYKDWQ-ITL-SRRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGG 389 (486)
Q Consensus 316 ~~~~~~~--~-~~~y~~~~~~~~~~~~~~~~~~-~~~-sr~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~ 389 (486)
....... . ...|..... ...+.... ... +-.. ...++..++..+...+++++.++..++++++.+.|++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~ 277 (356)
T cd06451 203 ALERIKKKTKPKGFYFDLLL-----LLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEA 277 (356)
T ss_pred HHHHHHhcCCCCceeecHHH-----HHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3332221 1 111111000 00000000 011 1111 1235556677677788899999999999999999998
Q ss_pred CCCeEEecCCC--eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhc-CcEEEeeeeECCEeEEEEEecCCCCcHH
Q 038818 390 DNRFEIVAPRN--FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINAS-GQLYVSHGMVAGIYFIRFAVGATLTEDR 466 (486)
Q Consensus 390 ~~~~~~~~~~~--~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~lR~~~~~~~tt~~ 466 (486)
. ++++..++. .+.+.+...+.. ....++.+.|.++ |+.+.++.......++|++++ +.++++
T Consensus 278 ~-g~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~-~~~~~e 342 (356)
T cd06451 278 L-GLKLLAKPELRSPTVTAVLVPEG-------------VDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHM-GEATRE 342 (356)
T ss_pred c-CCeeccCcccCCCceEEEECCCC-------------CCHHHHHHHHHHhCCEEEecccccccCCEEEEecC-CCCCHH
Confidence 7 888875432 344433222221 0124567777777 774433222223458999995 568888
Q ss_pred HHHHHHHHHHHHH
Q 038818 467 HVIAAWKVVQEKL 479 (486)
Q Consensus 467 did~~i~~l~~~~ 479 (486)
||++++++|++++
T Consensus 343 ~v~~~~~~l~~~~ 355 (356)
T cd06451 343 DVLGVLSALEEAL 355 (356)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998865
No 35
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.96 E-value=8.5e-27 Score=234.37 Aligned_cols=343 Identities=13% Similarity=0.131 Sum_probs=223.1
Q ss_pred cceecCCCCCHHHHHHHHHHhhc-----CCCccccccCh-hhHHHHHHHHHHHHHHcCC-CCCCccCCCcceEEcCCchH
Q 038818 76 YFAYFPSSGSIAGFLGEMLSSGF-----NVVGFNWMSSP-AATELENIVMDWLGEMLKL-PKSFLFSGTGGGVIQGTTCE 148 (486)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~~-~~~~le~~~~~~l~~l~g~-~~~~~~~~~~~~~~t~ggt~ 148 (486)
||++-.+++.++. +.+.+..++ |+.. .+..+. ....+++ .+..+.+.+|. +++ +.++|+|+|+
T Consensus 2 yld~aa~~~~~~~-v~~~~~~~~~~~~~n~~~-~~~~~~~~~~~l~~-a~~~~~~~~~~~~~~-------~i~~t~g~te 71 (382)
T TIGR03403 2 YLDNNATTMLDPK-VKELMDPFFCDIYGNPNS-LHQFGTATHPAIAE-ALDKLYKGINARDLD-------DIIITSCATE 71 (382)
T ss_pred cccCcCCCCCCHH-HHHHHHHHHHhcCcCCcc-ccHHHHHHHHHHHH-HHHHHHHHcCcCCCC-------eEEEeCCHHH
Confidence 5666555554443 444444433 2221 111222 2334444 44555666776 333 7899999999
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHH---HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHH
Q 038818 149 AILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAA---QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDI 225 (486)
Q Consensus 149 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~---~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~ 225 (486)
++..++.......+.+ .++..|+++...|+++...+ +..|+ +++.+|+++ ++.+|+++|++++++.+
T Consensus 72 al~~~~~~~~~~~~~~-----~~~~~vi~~~~e~ps~~~~~~~~~~~G~---~v~~v~~~~--~g~~d~~~l~~~i~~~t 141 (382)
T TIGR03403 72 SNNWVLKGVYFDEILK-----GGKNHIITTEVEHPAVRATCAFLESLGV---EVTYLPINE--QGTITAEQVREAITEKT 141 (382)
T ss_pred HHHHHHHHHHHhhccc-----CCCCEEEEcCCccHHHHHHHHHHHHCCC---EEEEEecCC--CCCCCHHHHHHhcccCC
Confidence 9887776542110000 03457888989998876654 45677 999999985 46899999999987543
Q ss_pred HCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCc
Q 038818 226 QAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD 305 (486)
Q Consensus 226 ~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~ 305 (486)
.+|++++++|++|.+.|+++|.++|+++|+++|+|++++.+....+. .. .++|++++++||| ++|.|
T Consensus 142 ------~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~-~~-----~~~D~~~~s~~K~-~gp~G 208 (382)
T TIGR03403 142 ------ALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDV-QK-----AGVDFLSFSAHKF-HGPKG 208 (382)
T ss_pred ------eEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCc-cc-----cCCCEEEEcchhh-CCCCc
Confidence 47889999999999999999999999999999999999765543321 11 2799999999998 56889
Q ss_pred ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCc-hHHHHHHHHhchHHHHHHHHHHHHHHHHHH
Q 038818 306 CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRA-LKLWLVLRSFGVANLRNFLRSHVRMAQLFQ 384 (486)
Q Consensus 306 ~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~-l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~ 384 (486)
+|++++|+...+ .+ .+...... .... .++-...+ +++..+++.. .+.++...++..++++++.
T Consensus 209 ~g~l~vr~~~~~------~p-~~~g~~~~----~~~~----~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~ 272 (382)
T TIGR03403 209 VGGLYIRKGVEL------TP-LFHGGEHM----GGRR----SGTLNVPYIVAMGEAMRLA-NEYLDFEKSHVRRLRDRLE 272 (382)
T ss_pred eEEEEECCCCCC------CC-cccCCCCC----CCcc----cCCcChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHH
Confidence 999999876321 12 22111000 0000 11111111 2444455433 3457777888999999999
Q ss_pred HHHhCCCCeEEecCC--C-eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeee--------------
Q 038818 385 ELVGGDNRFEIVAPR--N-FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGM-------------- 447 (486)
Q Consensus 385 ~~L~~~~~~~~~~~~--~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-------------- 447 (486)
+.|+++++++++.++ . .+++.|.+.... .+.+...|.++|+..-.+..
T Consensus 273 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~ 337 (382)
T TIGR03403 273 DALLELPDVFVVGDREHRVPNTILISIKGVE---------------GEAMLWDLNKAGIAASTGSACASEDLEANPVMVA 337 (382)
T ss_pred HHHhcCCCEEEECCCCCCcCCEEEEEeCCCC---------------HHHHHHhhccCCEEEEchhccCCCCCCcCHHHHH
Confidence 999999999998653 2 346677765321 23455556667764322110
Q ss_pred E--C---CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 448 V--A---GIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 448 ~--~---~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
. . ..+.+|+|++ +.+|++|||+++++|+++++++.
T Consensus 338 ~g~~~~~~~~~iR~s~~-~~~t~~did~~~~~l~~~~~~~~ 377 (382)
T TIGR03403 338 IGADKELAHTAIRLSLS-RFTTEEEIDYTIEVFKKAVQRLR 377 (382)
T ss_pred cCCChHHhCeeEEEECC-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 0 1357999995 68899999999999999987753
No 36
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.96 E-value=2.3e-27 Score=237.56 Aligned_cols=318 Identities=16% Similarity=0.156 Sum_probs=223.3
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCc
Q 038818 103 FNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTH 182 (486)
Q Consensus 103 ~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 182 (486)
..+..+....++-+++++.+++++|.+++. ..++++++|+++..++....... + ++..|+++...|
T Consensus 33 ~~~~~~~~~~~~~~~~r~~la~~lg~~~~~------~v~~~~~~t~a~~~~~~~l~~~~-~-------~g~~vl~~~~~~ 98 (371)
T PF00266_consen 33 GVSHRSREFAEILEEAREALAKLLGAPPDE------EVVFTSNGTEALNAVASSLLNPL-K-------PGDEVLVTSNEH 98 (371)
T ss_dssp SSSTTSHHHHHHHHHHHHHHHHHHTSSTTE------EEEEESSHHHHHHHHHHHHHHHG-T-------TTCEEEEEESSH
T ss_pred cccchhhhhhHHHHHHHHHHHHhcCCcccc------ccccccccchhhhhhhhcccccc-c-------cccccccccccc
Confidence 344455666777788999999999998832 78999999998877666664321 1 566788888999
Q ss_pred hHHH----HHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHH
Q 038818 183 SALQ----KAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKR 258 (486)
Q Consensus 183 ~s~~----~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~ 258 (486)
++.. ..++..|+ +++.+|.+. ++.+|+++++++|.+++ .+|++++.+|.+|.+.|+++|+++||+
T Consensus 99 ~s~~~~~~~~~~~~g~---~v~~i~~~~--~~~~~~~~~~~~l~~~~------~lv~~~~~~~~tG~~~pi~~I~~~~~~ 167 (371)
T PF00266_consen 99 PSNRYPWEEIAKRKGA---EVRVIPADP--GGSLDLEDLEEALNPDT------RLVSISHVENSTGVRNPIEEIAKLAHE 167 (371)
T ss_dssp HHHHHHHHHHHHHTTE---EEEEEEEGT--TSSCSHHHHHHHHHTTE------SEEEEESBETTTTBBSSHHHHHHHHHH
T ss_pred cccccccccccccchh---hhccccccc--cchhhhhhhhhhhcccc------ceEEeecccccccEEeeeceehhhhhc
Confidence 9865 44456788 999999876 45999999999997554 489999999999999999999999999
Q ss_pred hCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCccc--ccCccCCCC
Q 038818 259 YSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEF--LRNKASDSK 336 (486)
Q Consensus 259 ~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y--~~~~~~~~~ 336 (486)
+|++++||++++.+....+- .. + ++|.+++++|| +++|.|+|+++++++.. .+......++ ....... .
T Consensus 168 ~~~~~~vD~~~~~g~~~id~-~~----~-~~D~~~~s~~K-l~gp~G~g~l~v~~~~~-~~~~p~~~~~~~~~~~~~~-~ 238 (371)
T PF00266_consen 168 YGALLVVDAAQSAGCVPIDL-DE----L-GADFLVFSSHK-LGGPPGLGFLYVRPEAI-ERLRPAKPGGGYLDFPSLQ-E 238 (371)
T ss_dssp TTSEEEEE-TTTTTTSS--T-TT----T-TESEEEEESTS-TTSSSTEEEEEEEHHHH-HHHHTSSSSSSTTTHHHHH-H
T ss_pred cCCceeEechhccccccccc-cc----c-ccceeeecccc-cCCCCchhhheehhhhh-hccccccccccccccccch-h
Confidence 99999999999887765542 21 1 79999999999 88899999999998643 2221111111 1000000 0
Q ss_pred CccCCCCccccCCCC-C-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC----CCeeEEEEEeec
Q 038818 337 QVVDYKDWQITLSRR-F-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP----RNFAVVCFRVLP 410 (486)
Q Consensus 337 ~~~~~~~~~~~~sr~-~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~----~~~~~v~f~~~~ 410 (486)
.......+.++.|.. . ..+++..+++.+...|++++.++..++++++.+.|+++++++++.+ ...++++|.+.+
T Consensus 239 ~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~ 318 (371)
T PF00266_consen 239 YGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPG 318 (371)
T ss_dssp HCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETT
T ss_pred cccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeecC
Confidence 000001111222211 1 1245566777777788999999999999999999999999998663 235789998854
Q ss_pred CCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeEC---------CEeEEEEEecCCCCcHHHHHHH
Q 038818 411 SASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVA---------GIYFIRFAVGATLTEDRHVIAA 471 (486)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---------~~~~lR~~~~~~~tt~~did~~ 471 (486)
.. .+.+.+.|.++|+.+.. +... -.+++|+|+ ++++|++|||+|
T Consensus 319 ~~---------------~~~~~~~L~~~~I~~~~-G~~~~~~~~~~~~~~~~iRvS~-~~~nt~~dv~~l 371 (371)
T PF00266_consen 319 SD---------------ADDVVKYLEERGIAVST-GSACAGPSLDILGMGGVIRVSL-HYYNTEEDVDRL 371 (371)
T ss_dssp SS---------------HHHHHHHHHHHTEEEEE-STTTCHHHHHHHHTTTEEEEE--GTTSSHHHHHHH
T ss_pred CC---------------HHHHHHHHhhcCEEEec-cCcccHHHHHHhCCCCEEEEec-cCCCCHHHHhhC
Confidence 31 24566677777764333 2111 127899997 578889999986
No 37
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.96 E-value=5.1e-26 Score=228.55 Aligned_cols=317 Identities=15% Similarity=0.109 Sum_probs=215.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.....++++.+++++|.+. .++++|||++|..++..... ++..|+++..+|++...+++.
T Consensus 62 ~~~~~~l~~~lA~~~g~~~---------~~~~~g~t~a~~~al~~l~~-----------~gd~Vlv~~~~h~s~~~~~~~ 121 (387)
T PRK09331 62 KPPIADFHEDLAEFLGMDE---------ARVTHGAREGKFAVMHSLCK-----------KGDYVVLDGLAHYTSYVAAER 121 (387)
T ss_pred ChHHHHHHHHHHHHhCCCc---------EEEeCCHHHHHHHHHHHhcC-----------CCCEEEECCCchHHHHHHHHH
Confidence 3345667788999999853 57899999999887776543 667888999999999999999
Q ss_pred cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHH-CCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeecccc
Q 038818 192 AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQ-AGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYA 270 (486)
Q Consensus 192 ~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~-~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g 270 (486)
.|+ +++.+|++.+.++.+|+++|+++|++..+ .+..+.+|+++++++++|.+.|+++|+++|++||+++|||+||+
T Consensus 122 ~G~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~ 198 (387)
T PRK09331 122 AGL---NVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYT 198 (387)
T ss_pred cCC---EEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcc
Confidence 999 99999983222578999999999986422 12346789999999999999999999999999999999999998
Q ss_pred chhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCC
Q 038818 271 GSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSR 350 (486)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr 350 (486)
.+.+..+. .. .++|.++.++|||+++|.++|+++++++ .+........+|..... . .+.++.
T Consensus 199 ~g~~~~~~-~~-----~g~D~~~~s~~K~l~~~~~~G~l~~~~~-~i~~~~~~~~~~~~~~~-------~----~~~~~~ 260 (387)
T PRK09331 199 VGRMPVDG-KK-----LGADFIVGSGHKSMAASAPSGVLATTEE-YADKVFRTSRKFGVKEV-------E----LLGCTL 260 (387)
T ss_pred cCCcCCCH-HH-----cCCCEEEeeCcccccCCCCEEEEEECHH-HHhhcccccCCCcccce-------e----eeceec
Confidence 76544332 11 1689999999999999999999888754 33322222222221100 0 011111
Q ss_pred C-CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC--CCeeEEEEEeecCCCCCCCCCCccchHHH
Q 038818 351 R-FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP--RNFAVVCFRVLPSASGLGDGKANEGANEL 427 (486)
Q Consensus 351 ~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v~f~~~~~~~~~~~~~~~~~~~~~ 427 (486)
+ ..+..++.++..+ .+. .+..++..++++++++.|+++++++++.+ ...+++.+....... . .......
T Consensus 261 ~~~~~~~~~aal~~~-~~~-~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~~---~---~~~~~~~ 332 (387)
T PRK09331 261 RGAPLVTLMASFPHV-VER-VKRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFDE---I---AKKHKRR 332 (387)
T ss_pred CchHHHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchhH---H---hhhcccc
Confidence 1 1233444444433 122 23456678899999999999999998853 234566565431100 0 0000111
Q ss_pred HHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 428 NRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 428 ~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
...+.+.|.++|+..+.+ .....+|+..+ ..+++|+++++++|+++.+++
T Consensus 333 ~~~~~~~L~~~gI~~~~~---~~~~i~ri~~~--g~t~~di~~l~~aL~~i~~~~ 382 (387)
T PRK09331 333 GFFLYEELKKRGIHGIKP---GATKEFKLSTY--GLTWEQVEYVADAFKEIAEKY 382 (387)
T ss_pred chhHHHHHHHcCceEEcc---CCceEEEEEec--cCCHHHHHHHHHHHHHHHHhc
Confidence 245777787788752222 22446777664 357889999999999988764
No 38
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.96 E-value=8.1e-27 Score=236.03 Aligned_cols=370 Identities=13% Similarity=0.042 Sum_probs=230.7
Q ss_pred HHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHHHHHHhhcCCCcccccc-----ChhhHHHHHHHHHHHHHHcCC
Q 038818 54 ETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMS-----SPAATELENIVMDWLGEMLKL 128 (486)
Q Consensus 54 ~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~-----~~~~~~le~~~~~~l~~l~g~ 128 (486)
.+||+++...-.++.....+-..++-...+...|.++.+..... .....|.. .....++..++.+++++++|.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~ 79 (398)
T cd00613 2 TEVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILEN--EFYTAYTPYQPEISQGRLQALFELQTMLCELTGM 79 (398)
T ss_pred HHHHHHHHHHHhcCcCcccCcccccccccCCcCcHHHHHHhccc--cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCC
Confidence 37888888742233222111133444333455566665554443 11122222 455678889999999999998
Q ss_pred CCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcC----CCCCCeEEEec
Q 038818 129 PKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAG----IDPKNFRAIKT 204 (486)
Q Consensus 129 ~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G----~g~~~v~~v~~ 204 (486)
+.+ ..+++.+|+.+...++..++... .++++|+++...|.+...++..+| . +++.+|+
T Consensus 80 ~~~-------~v~~~~~g~~~~~~~~~~~~~~~--------~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~---~~~~v~~ 141 (398)
T cd00613 80 DVA-------NASLQDEATAAAEAAGLAAIRAY--------HKRNKVLVPDSAHPTNPAVARTRGEPLGI---EVVEVPS 141 (398)
T ss_pred Ccc-------ceeccCchHHHHHHHHHHHHhcc--------cCCCEEEEcCccCcchHHHHHHhcccCCc---EEEEecc
Confidence 754 45566655555444544443320 036788899999999988888887 6 8899998
Q ss_pred CCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCc-hHHHHHHHHhCceEEeeccccchhccCccchhhh
Q 038818 205 TKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPL-GPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFI 283 (486)
Q Consensus 205 d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl-~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~ 283 (486)
+. ++.+|+++|++++.++ +.+|+++.++ ++|.+.|+ ++|+++|++||+|+++|++++.+....+..
T Consensus 142 ~~--~~~~d~~~l~~~i~~~------t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~---- 208 (398)
T cd00613 142 DE--GGTVDLEALKEEVSEE------VAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPG---- 208 (398)
T ss_pred CC--CCCcCHHHHHHhcCCC------eEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChH----
Confidence 64 4589999999988643 3467777775 68999885 999999999999999999986544332211
Q ss_pred cCCCCCCceeeccccccCCCC-----cceEEEeeCchHHHHHhcCCcccccCccC-CCCCccCCC----CccccCCC---
Q 038818 284 DGIEGADSFSLNAHKWFFTTL-----DCCCLWVKNPNALIKALSTNPEFLRNKAS-DSKQVVDYK----DWQITLSR--- 350 (486)
Q Consensus 284 ~~~~~aDsi~~~~hK~l~~p~-----~~g~~~~~~~~~~~~~~~~~~~y~~~~~~-~~~~~~~~~----~~~~~~sr--- 350 (486)
..++|+++.++|||+ .|. ++|+++++++ ... .+.....+...... ......... ....+.+.
T Consensus 209 --~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~ 283 (398)
T cd00613 209 --EYGADIVVGNLQKTG-VPHGGGGPGAGFFAVKKE-LVR-FLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNI 283 (398)
T ss_pred --HcCCCEEEeeccccC-CCCCCCCCceeEEEEhhh-hHh-hCCCCeeccccccCCCcceEEecccchhhcccccccccc
Confidence 126999999999999 664 4667777654 222 22111000000000 000000000 00000111
Q ss_pred ----CCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHH
Q 038818 351 ----RFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANE 426 (486)
Q Consensus 351 ----~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~ 426 (486)
...+..+|.++..++.++++++.++..++++++++.|+++++......+..++++|++.... +.
T Consensus 284 ~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~~------------~~ 351 (398)
T cd00613 284 CTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGPFFHEFVLRLPPLY------------GI 351 (398)
T ss_pred eecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCeeEEEEEEcCCcc------------hH
Confidence 11224566677778889999999999999999999999886544222344556677654210 12
Q ss_pred HHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHH
Q 038818 427 LNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVV 475 (486)
Q Consensus 427 ~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l 475 (486)
...++.+.|.++|+.+ ....+.+...+|+++ +..+|++|||+++++|
T Consensus 352 ~~~~~~~~L~~~gi~~-~~~~~~~~~~lRis~-~~~~t~edid~~~~~L 398 (398)
T cd00613 352 RAEDLAKALIDGGFHA-PTMYLPVDGTLMIEP-TETETKEELDALLEAL 398 (398)
T ss_pred HHHHHHHhhhhcCccc-cccccCCCCeEEEEc-CCCCCHHHHHHHHHhC
Confidence 2346777777778742 221123457899998 6788999999999864
No 39
>PRK02948 cysteine desulfurase; Provisional
Probab=99.96 E-value=1e-26 Score=233.73 Aligned_cols=342 Identities=13% Similarity=0.144 Sum_probs=226.5
Q ss_pred cceecCCCCCHHHHHHHHHHhhc----CCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHH
Q 038818 76 YFAYFPSSGSIAGFLGEMLSSGF----NVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAIL 151 (486)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~----n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~ 151 (486)
||++-.+++.+..++ +.+..++ .+....+..+.....+..++++.+++++|.+++ .+++++|+|+++.
T Consensus 3 yld~a~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~i~~~~g~t~a~~ 74 (381)
T PRK02948 3 YLDYAATTPMSKEAL-QTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQ-------GIYFTSGGTESNY 74 (381)
T ss_pred eccCCCCCCCCHHHH-HHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCcHHHHHH
Confidence 555555545444443 3332222 222233444555667778899999999998765 6889999999998
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHH---HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCC
Q 038818 152 CTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAA---QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAG 228 (486)
Q Consensus 152 ~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~---~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g 228 (486)
.++.+...... .++.+|+++...|+|+...+ +..|+ +++.+|+++ ++.+|+++|++++++.
T Consensus 75 ~~~~~~~~~~~-------~~g~~vv~~~~~h~s~~~~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~l~~~---- 138 (381)
T PRK02948 75 LAIQSLLNALP-------QNKKHIITTPMEHASIHSYFQSLESQGY---TVTEIPVDK--SGLIRLVDLERAITPD---- 138 (381)
T ss_pred HHHHHHHHhcc-------CCCCEEEECCcccHHHHHHHHHHHhCCC---EEEEEeeCC--CCCCCHHHHHHhcCCC----
Confidence 88776653210 14567888999999876654 55577 999999875 4689999999988643
Q ss_pred CccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceE
Q 038818 229 LIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCC 308 (486)
Q Consensus 229 ~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~ 308 (486)
+.+|++++++|++|.+.|+++|.++|+++|+++|||++++.+....+ .. . .++|+++.++||++ +|.|+|+
T Consensus 139 --~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~-~~----~-~~~d~~~~s~~K~~-gp~G~G~ 209 (381)
T PRK02948 139 --TVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPID-VF----E-MGIDSLSVSAHKIY-GPKGVGA 209 (381)
T ss_pred --CEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccccccC-cc----c-CCCCEEEecHHhcC-CCCcEEE
Confidence 35899999999999999999999999999999999998865543222 11 1 26999999999976 5889999
Q ss_pred EEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccC-CCC-CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH
Q 038818 309 LWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITL-SRR-FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQEL 386 (486)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~-sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~ 386 (486)
++++++..+. + ...... ... .++. +-. ....++..++..+ .++.++..++..++++++.+.
T Consensus 210 l~~~~~~~~~------~-~~~~~~-------~~~--~~~~~t~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~ 272 (381)
T PRK02948 210 VYINPQVRWK------P-VFPGTT-------HEK--GFRPGTVNVPGIAAFLTAAENI-LKNMQEESLRFKELRSYFLEQ 272 (381)
T ss_pred EEEcCCCCCC------C-cccCCC-------CCC--CcCCCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 9987652111 0 000000 000 0111 111 1223344444433 256788889999999999999
Q ss_pred HhCCCCeEEecC--CC---eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeee----E---------
Q 038818 387 VGGDNRFEIVAP--RN---FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGM----V--------- 448 (486)
Q Consensus 387 L~~~~~~~~~~~--~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~----~--------- 448 (486)
|+++ ++++... +. ..++.|...... ...+...|.++|+.+-.+.. +
T Consensus 273 L~~~-~~~v~~~~~~~~~~~~i~~~~~~~~~---------------~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~ 336 (381)
T PRK02948 273 IQTL-PLPIEVEGHSTSCLPHIIGVTIKGIE---------------GQYTMLECNRRGIAISTGSACQVGKQEPSKTMLA 336 (381)
T ss_pred HhcC-CCCEEEeCCCccCcCCEEEEEeCCCC---------------HHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHH
Confidence 9987 5554321 11 235666654311 23345556667774332110 0
Q ss_pred ------CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 449 ------AGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 449 ------~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
....++|++++ +.+|++|+|+++++|+++.+++-+
T Consensus 337 ~~~~~~~~~~~lRis~~-~~~t~~di~~l~~~l~~~~~~~~~ 377 (381)
T PRK02948 337 IGKTYEEAKQFVRFSFG-QQTTKDQIDTTIHALETIGNQFYR 377 (381)
T ss_pred cCCChHHhCceEEEEcC-CCCCHHHHHHHHHHHHHHHHHHhc
Confidence 12468999985 688889999999999998877643
No 40
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.96 E-value=3.9e-27 Score=226.05 Aligned_cols=350 Identities=15% Similarity=0.134 Sum_probs=225.1
Q ss_pred CCCCcceecCCCCCHHHHHHH---HHHhhc-CCCccccccChhhH-HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCc
Q 038818 72 QSPYYFAYFPSSGSIAGFLGE---MLSSGF-NVVGFNWMSSPAAT-ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTT 146 (486)
Q Consensus 72 ~~p~~~~~~~~~~~~~~~~~~---~l~~~~-n~~~~~~~~~~~~~-~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~gg 146 (486)
..|-|+++...++..+.++.. ++..++ |+... ..+..+. .+| +.++.+|+|+|.++. +++||+|+
T Consensus 42 ~~~vyld~~at~p~~~~Vldam~~~~~~~~~nPh~~--~y~w~~~~~~E-~aR~~VAklInAd~~-------dIiFts~A 111 (428)
T KOG1549|consen 42 TRPVYLDNQATGPMDPRVLDAMLPYLLEYLGNPHSR--SYGWKAEDAVE-AAREQVAKLINADPS-------DIVFTSGA 111 (428)
T ss_pred CccEEEecCcCCCCCHHHHHHHHHHHHHhhcCCCcc--ccchhhhHHHH-HHHHHHHHHhCCCCC-------cEEEeCCc
Confidence 467788888777777776544 334444 33322 1222233 355 579999999999987 69999999
Q ss_pred hHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHc---CCCCCCeEEEecCCCCCcccCHHHHHHHHHH
Q 038818 147 CEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIA---GIDPKNFRAIKTTKSSSFTLTPESLQAAIDL 223 (486)
Q Consensus 147 t~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~---G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~ 223 (486)
||||.+++....... . . + .+..|++...+|.|+...++.+ |+ .|+++|++. ++..|.+.+++.|++
T Consensus 112 TEs~Nlvl~~v~~~~-~---~-~-~~k~iitl~~eH~~v~~s~~~l~~~g~---~Vt~lpv~~--~~~~d~~~~~~~i~~ 180 (428)
T KOG1549|consen 112 TESNNLVLKGVARFF-G---D-K-TKKHIITLQTEHPCVLDSCRALQEEGL---EVTYLPVED--SGLVDISKLREAIRS 180 (428)
T ss_pred hHHHHHHHHHhhccc-c---c-c-ccceEEEecccCcchhHHHHHHHhcCe---EEEEeccCc--cccccHHHHHHhcCC
Confidence 999987766532211 1 1 1 2227888889999998887766 77 999999984 579999999999998
Q ss_pred HHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC
Q 038818 224 DIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT 303 (486)
Q Consensus 224 ~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p 303 (486)
+++ +|.+.+.++..|.+.|++||+++|+++|+.+|+|+||+.+....+- +.+ ++|.+++++|||++.|
T Consensus 181 ~T~------lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV-~el-----n~D~~s~s~HK~ygp~ 248 (428)
T KOG1549|consen 181 KTR------LVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDV-QEL-----NADFLSISAHKIYGPP 248 (428)
T ss_pred Cce------EEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccH-HHc-----CchheeeecccccCCC
Confidence 764 8999999999999999999999999999999999999988776642 322 8999999999998877
Q ss_pred CcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCC--CchHHHHHHHHhc--hHHHHHHHHHHHHH
Q 038818 304 LDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRF--RALKLWLVLRSFG--VANLRNFLRSHVRM 379 (486)
Q Consensus 304 ~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~--~~l~~~~~l~~~g--~~g~~~~~~~~~~~ 379 (486)
. +|++|+|.+.. .....|++.++... . ++..+... .++.+-.+.+... ..+...++ .++
T Consensus 249 ~-iGaLYvr~~~~---~~~~~p~~~GGgq~-----r-----~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~---~~~ 311 (428)
T KOG1549|consen 249 G-IGALYVRRKRP---RLRVEPPLSGGGQE-----R-----GLRSGTVATPLAVGLGSAAEFVNKEMAYDEAII---KRL 311 (428)
T ss_pred c-ceEEEEccCCC---cccccCcccCCccc-----c-----ccccCCcCchhhhhhHHHHHHHHhhcchhHHHH---HHH
Confidence 5 99999997211 22445555544321 0 11111111 1222333333321 12222222 335
Q ss_pred HHHHHHHHh-CCCCeEEecCCC---eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeee----e----
Q 038818 380 AQLFQELVG-GDNRFEIVAPRN---FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHG----M---- 447 (486)
Q Consensus 380 a~~l~~~L~-~~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~----~---- 447 (486)
...+...+. ..+...+.+.+. -+.+.|.+.... .. .+-..+.+....+|..+.+.. .
T Consensus 312 ~~~ll~~i~~~~~~~~~~G~~~~~~~~~~~~~~~~~~--------g~---~~~~~~~~~~l~s~~a~~~~~~epsy~l~~ 380 (428)
T KOG1549|consen 312 SEKLLMGIGQSLPEVTLNGSGKSRYPGLVSLSFPYVE--------GE---SLLMDLKDVALSSGSACTSASLEPSYVLRA 380 (428)
T ss_pred HHHHHHHHhhhCchhhccCCcccccccceeeeccccc--------Cc---chhhhhhhhhhcccchhhcCCCCcchhhhh
Confidence 666666653 355555544321 123333333111 00 011122222233343322211 0
Q ss_pred -----ECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 448 -----VAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 448 -----~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
-..+..+||++. .+|+++|++++++.+.+.+..+.
T Consensus 381 ~G~~~~~~~~~iRis~G-~y~t~~di~~~~~~i~~~v~~~~ 420 (428)
T KOG1549|consen 381 IGVDEDLAHSSIRISIG-RYTTEEDIDYLVDAIKKLVSLLR 420 (428)
T ss_pred cCcchhhhcceeEEeee-eeCcHHHHHHHHHHHHHHHHhcc
Confidence 013678999995 68888899999999999887654
No 41
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.95 E-value=4.3e-26 Score=245.29 Aligned_cols=390 Identities=13% Similarity=0.009 Sum_probs=256.3
Q ss_pred CCCC--CCCCHHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHHHHHHhhcC-CCccc---cccChhhHHHHHHH
Q 038818 45 SAPY--NPEPIETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGEMLSSGFN-VVGFN---WMSSPAATELENIV 118 (486)
Q Consensus 45 ~~p~--~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n-~~~~~---~~~~~~~~~le~~~ 118 (486)
..|. .-.|+.++++.+.++-.++....++-.-+|-+ +.-+-+.+.+.....-. .+.+. -++..+..++-.++
T Consensus 496 ~~p~f~~~~se~~~~r~~~~l~~~~~~~~~~~~plgsc--tmk~n~~~~~~~~~~~~~~~~hp~~p~~~~~g~~~~~~~~ 573 (993)
T PLN02414 496 THPIFNQYHSEHELLRYLHRLQNKDLSLVHSMIPLGSC--TMKLNATTEMMPVTWPEFANIHPFAPVDQAQGYQEMFEDL 573 (993)
T ss_pred cCcccccccCHHHHHHHHHHHhhcccccccCCccCccc--ccccCchhhhhhhcCcchhhcCCCCCHHHHHHHHHHHHHH
Confidence 4455 23688999999998765554443332233321 11111112222221100 11222 23455667788899
Q ss_pred HHHHHHHcCCCCCCccCCCcceEEcCCch----HHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCC
Q 038818 119 MDWLGEMLKLPKSFLFSGTGGGVIQGTTC----EAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGI 194 (486)
Q Consensus 119 ~~~l~~l~g~~~~~~~~~~~~~~~t~ggt----~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~ 194 (486)
++++++++|++ ..+|+++++ ++++.++..... ..|.. .+.+|+++..+|.++...+...|+
T Consensus 574 r~~la~i~g~~---------~v~f~pnaga~ge~a~~~vi~~~~~----~~Gd~--~r~~vli~~~aH~sn~a~a~~~G~ 638 (993)
T PLN02414 574 GDLLCEITGFD---------SFSLQPNAGAAGEYAGLMVIRAYHL----SRGDH--HRNVCIIPVSAHGTNPASAAMCGM 638 (993)
T ss_pred HHHHHHHhCCC---------eEEEcCCCcHHHHHHHHHHHHHHHh----ccCCC--CCCEEEeCCCcCccCHHHHHHCCC
Confidence 99999999993 578999888 666666555432 11211 355899999999999999999999
Q ss_pred CCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhc
Q 038818 195 DPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSAC 274 (486)
Q Consensus 195 g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~ 274 (486)
+++.||+|+ +|.+|+++|+++|++.+. ...+|++++++|..|.++||++|+++|+++|+.++||+|+..+..
T Consensus 639 ---~vv~v~~d~--~G~vDle~L~~~i~~~~~---~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~ 710 (993)
T PLN02414 639 ---KIVVVGTDA--KGNINIEELRKAAEAHKD---NLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQV 710 (993)
T ss_pred ---EEEEeccCC--CCCcCHHHHHHHHhccCC---CeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhcc
Confidence 999999985 569999999999985331 245899999999999999999999999999999999999976543
Q ss_pred cCccchhhhcCCCCCCceeeccccccCCCCc-----ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCC
Q 038818 275 ICPEFRHFIDGIEGADSFSLNAHKWFFTTLD-----CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLS 349 (486)
Q Consensus 275 ~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-----~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~s 349 (486)
....... -++|+++++.||||++|.| +|++++++. + ....|+....... +..........|+
T Consensus 711 ~l~~p~~-----~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~--L---~p~lPg~~v~~~~---~~~~r~~~s~iGt 777 (993)
T PLN02414 711 GLTSPGF-----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--L---APFLPSHPVVPTG---GIPRPEKTQPLGT 777 (993)
T ss_pred CcCCccc-----cCCCEEEecCCccCCcCcccCCCCeeeEEEchh--h---cccCCCCccccCC---CcccccCCCCcCC
Confidence 2211111 2899999999999997765 999988863 2 1223333221110 0000000011233
Q ss_pred CCC-------CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC--CCeeEEEEEeecCCCCCCCCCC
Q 038818 350 RRF-------RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP--RNFAVVCFRVLPSASGLGDGKA 420 (486)
Q Consensus 350 r~~-------~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v~f~~~~~~~~~~~~~~ 420 (486)
++. .++..|..++.+|.+|+++..++...+++|++++|.+..++...++ +..+.+.+.+.+..
T Consensus 778 ~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l~-------- 849 (993)
T PLN02414 778 ISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPFK-------- 849 (993)
T ss_pred ccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEeccccc--------
Confidence 332 2246788899999999999999999999999999987544433333 33445555544210
Q ss_pred ccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 421 NEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 421 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
.........+.++|.+.|+..... .+...+.+|++.+ ...+++|||+++++|+.+.+++.
T Consensus 850 -~~~g~~~~di~krL~d~Gihapt~-~~pv~~~lmiepT-E~~skeelDrf~~al~~i~~e~~ 909 (993)
T PLN02414 850 -NTAGIEPEDVAKRLMDYGFHAPTM-SWPVPGTLMIEPT-ESESKAELDRFCDALISIREEIA 909 (993)
T ss_pred -cccCCCHHHHHHHHHHcCcEEeee-ccccCCEEEEEee-eeCCHHHHHHHHHHHHHHHHHHH
Confidence 000011245666777778742221 2344678999996 57788899999999999987765
No 42
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.95 E-value=3.1e-26 Score=231.80 Aligned_cols=352 Identities=13% Similarity=0.074 Sum_probs=223.7
Q ss_pred CCcceecCCCCCHHHHHHHHHHhhc----CCCccccccC-hhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchH
Q 038818 74 PYYFAYFPSSGSIAGFLGEMLSSGF----NVVGFNWMSS-PAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCE 148 (486)
Q Consensus 74 p~~~~~~~~~~~~~~~~~~~l~~~~----n~~~~~~~~~-~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~ 148 (486)
..||++...++. |..+.+.+..++ ++....+..+ .....++.+..+ + +++|.+++ ..++++|+|+
T Consensus 28 ~iyld~~a~g~~-p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~~-------~v~~~~~~t~ 97 (406)
T TIGR01814 28 VIYLDGNSLGLM-PKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKED-------EVVVMNTLTI 97 (406)
T ss_pred cEEecCCCcCcC-cHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCCC-------cEEEeCCchH
Confidence 457776655554 555555555443 2222122221 122344444333 5 89998765 6899999999
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH----HHHHcCCCCCCe----EEEecCCCCCcccCHHHHHHH
Q 038818 149 AILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK----AAQIAGIDPKNF----RAIKTTKSSSFTLTPESLQAA 220 (486)
Q Consensus 149 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~----a~~~~G~g~~~v----~~v~~d~~~~~~~d~~~L~~~ 220 (486)
++..++...... +.++.+|+++..+|.|... .++..|+ ++ +.++.+. ++.+|++++++.
T Consensus 98 ~l~~~~~~~~~~--------~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~---~~~~~~~~~~~~~--~g~~~~~~l~~~ 164 (406)
T TIGR01814 98 NLHLLLASFYKP--------TPKRYKILLEAKAFPSDHYAIESQLQLHGL---TVEESMVQIEPRE--EETLRLEDILDT 164 (406)
T ss_pred HHHHHHHHhcCC--------cCCccEEEecCCCCChHHHHHHHHHHhcCC---CcccceEEeccCC--CCccCHHHHHHH
Confidence 876665543110 1123478888899988443 4556687 66 4566543 468899999998
Q ss_pred HHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeecccccc
Q 038818 221 IDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWF 300 (486)
Q Consensus 221 l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l 300 (486)
++... ..+.+|++++.++.+|.+.|+++|+++|+++|++++||++++.+....+- .. .++|++++++|||+
T Consensus 165 ~~~~~---~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~-~~-----~gvD~~~~s~hK~l 235 (406)
T TIGR01814 165 IEKNG---DDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDL-HD-----WGVDFACWCTYKYL 235 (406)
T ss_pred HHhcC---CCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCccccc-cc-----CCCCEEEEcCcccc
Confidence 86421 23568999999999999999999999999999999999999988765532 11 27999999999999
Q ss_pred CCCCcceEEEeeCchHHHHHhcCCcccccCccCC-CC--CccCCCCccccCCCC--CCchHHHHHHHHhchHHHHHHHHH
Q 038818 301 FTTLDCCCLWVKNPNALIKALSTNPEFLRNKASD-SK--QVVDYKDWQITLSRR--FRALKLWLVLRSFGVANLRNFLRS 375 (486)
Q Consensus 301 ~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~--~~~~~~~~~~~~sr~--~~~l~~~~~l~~~g~~g~~~~~~~ 375 (486)
++|+| |+++++.+... .......++....... .. .........++.+.. ...+++..+++.+...|++++.++
T Consensus 236 ~g~pG-~~l~v~~~~~~-~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~ 313 (406)
T TIGR01814 236 NAGPG-AGAFVHEKHAH-TERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKK 313 (406)
T ss_pred CCCCC-eEEEEehhhhh-hcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 87777 66666554321 1111111211110000 00 000001111112211 122344556666656678889999
Q ss_pred HHHHHHHHHHHHhCC----CCeEEecCC----CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeee
Q 038818 376 HVRMAQLFQELVGGD----NRFEIVAPR----NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGM 447 (486)
Q Consensus 376 ~~~~a~~l~~~L~~~----~~~~~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~ 447 (486)
..++++++++.|++. ++++++.+. ..++++|.+. .. .+.+.+.|.++|++ +.
T Consensus 314 ~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~~---------------~~~~~~~L~~~gi~-v~--- 373 (406)
T TIGR01814 314 SLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-VP---------------GKAVFQALIKRGVI-GD--- 373 (406)
T ss_pred HHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-CC---------------HHHHHHHHHHCCEE-Ee---
Confidence 999999999999875 468888653 2457888775 21 23566677777864 32
Q ss_pred ECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 448 VAGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 448 ~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
..+...+|+|+++.++|++|||+++++|++++
T Consensus 374 ~~~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 374 KREPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred ccCCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 22335899999767889999999999998864
No 43
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.95 E-value=2.3e-26 Score=231.88 Aligned_cols=350 Identities=11% Similarity=0.043 Sum_probs=237.0
Q ss_pred ceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHH
Q 038818 77 FAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAA 156 (486)
Q Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~ 156 (486)
+-+.|++...+..+.+.+...... ..++.+.++.+++++++++++|.+... ..+++++||.++..++..
T Consensus 11 ~l~~pGP~~~~~~V~~a~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~g~~~~~------~vi~~~~gt~a~~~a~~~ 79 (401)
T PLN02409 11 HLFVPGPVNIPERVLRAMNRPNED-----HRSPAFPALTKELLEDVKYIFKTKSGT------PFIFPTTGTGAWESALTN 79 (401)
T ss_pred eeccCCCCCCCHHHHHHhcCCCCC-----CCCHHHHHHHHHHHHHHHHHhCCCCCC------EEEEeCCcHHHHHHHHHh
Confidence 345677777766666665543322 135677888899999999999997542 578899999887666554
Q ss_pred HHHHHHHHccccCCCCeEEEecCCCchHH--HHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEE
Q 038818 157 ARDQILNEIGRENISRLVVYGSDQTHSAL--QKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFL 234 (486)
Q Consensus 157 a~~~~~~~~~~~~~~~~~v~~s~~~H~s~--~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~v 234 (486)
... +++.|+++...|++. ...++..|+ +++.++.+.+ ..+|+++|++++++++. ..+.+|
T Consensus 80 ~~~-----------~Gd~Vlv~~~~~~~~~~~~~~~~~g~---~v~~v~~~~~--~~~~~~~l~~~l~~~~~--~~~k~v 141 (401)
T PLN02409 80 TLS-----------PGDKVVSFRIGQFSLLWIDQMQRLNF---DVDVVESPWG--QGADLDILKSKLRQDTN--HKIKAV 141 (401)
T ss_pred cCC-----------CCCEEEEeCCCchhHHHHHHHHHcCC---ceEEEECCCC--CCCCHHHHHHHHhhCcC--CCccEE
Confidence 322 566788888889764 577888899 9999998753 35899999999986320 124578
Q ss_pred EeecCCccccccCCchHHHHH--HHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEee
Q 038818 235 CATVGTTAITTVDPLGPLCDI--AKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVK 312 (486)
Q Consensus 235 v~~~gtt~~G~idpl~~I~~i--~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~ 312 (486)
++++++|++|.+.|+++|+++ |+++|++++||++++.+....+- .. -++|.++.++|||+++|.|+|+++++
T Consensus 142 ~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~-~~-----~~~D~~~~s~~K~l~~P~G~G~l~~~ 215 (401)
T PLN02409 142 CVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRM-DE-----WGVDVALTGSQKALSLPTGLGIVCAS 215 (401)
T ss_pred EEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCccccc-cc-----cCccEEEEcCccccCcCCCcceeEEC
Confidence 999999999999999999999 99999999999999765443321 11 17899999999999999999999987
Q ss_pred CchHHHHHhcC--CcccccCccCCCCCccCCCCccccCCCC-CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhC
Q 038818 313 NPNALIKALST--NPEFLRNKASDSKQVVDYKDWQITLSRR-FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGG 389 (486)
Q Consensus 313 ~~~~~~~~~~~--~~~y~~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~ 389 (486)
++.. .+.... .+.|....... .....+.+. ..+-. ...+++..+++.+...|++++.++..++++++++.|++
T Consensus 216 ~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~g~~~-~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~ 291 (401)
T PLN02409 216 PKAL-EASKTAKSPRVFFDWADYL--KFYKLGTYW-PYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEA 291 (401)
T ss_pred HHHH-HHHhcCCCCCeecCHHHHH--HHHhcCCCC-CCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 6643 322221 11122110000 000000000 00101 01235555666666778999999999999999999988
Q ss_pred CCCeEEecCC---Ce-eEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHh-cCcEEEeeeeEC-CEeEEEEEecCCCC
Q 038818 390 DNRFEIVAPR---NF-AVVCFRVLPSASGLGDGKANEGANELNRKLLESINA-SGQLYVSHGMVA-GIYFIRFAVGATLT 463 (486)
Q Consensus 390 ~~~~~~~~~~---~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~-~~~~lR~~~~~~~t 463 (486)
+ +++++.+. .+ .+++|++.... + ..++.+.+.+ .|+ .+.++... +...+|++.|. .+
T Consensus 292 ~-g~~~~~~~~~~~s~~v~~~~~p~~~------------~--~~~l~~~l~~~~~i-~i~~G~~~~~~~~~Rig~~g-~~ 354 (401)
T PLN02409 292 W-GLKLCTKKPEWRSDTVTAVVVPEGI------------D--SAEIVKNAWKKYNL-SLGLGLNKVAGKVFRIGHLG-NV 354 (401)
T ss_pred c-CCeeccCChhhcccceEEEeCCCCC------------C--HHHHHHHHHHhCCE-EEEcCCCcccCCEEEEcCCC-CC
Confidence 7 89987642 13 34556554211 1 2345555543 354 45444322 35689999987 56
Q ss_pred cHHHHHHHHHHHHHHHHHH
Q 038818 464 EDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 464 t~~did~~i~~l~~~~~~l 482 (486)
+++|+..++++|.++++++
T Consensus 355 ~~~~~~~~~~~~~~~l~~~ 373 (401)
T PLN02409 355 NELQLLGALAGVEMVLKDV 373 (401)
T ss_pred CHHHHHHHHHHHHHHHHHc
Confidence 8889999999999988754
No 44
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.95 E-value=7.5e-26 Score=238.69 Aligned_cols=402 Identities=13% Similarity=0.065 Sum_probs=262.4
Q ss_pred hhHHhhcCC-CCCCC--CCCCHHHHHHHHHhhhcCCCcCCCCCCccee-----cCCCCCHHHHHHHHHHhhcCCCccccc
Q 038818 35 PGYLRKRLP-ESAPY--NPEPIETILQDVQQHIVPGITHWQSPYYFAY-----FPSSGSIAGFLGEMLSSGFNVVGFNWM 106 (486)
Q Consensus 35 p~~~~~~~~-~~~p~--~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~-----~~~~~~~~~~~~~~l~~~~n~~~~~~~ 106 (486)
|..+++.-+ ...|. .+.|+.++++.+.++-.++....++..|+|- .+..-..|....++++. .+.. ..+
T Consensus 460 p~~~~r~~~~~~~p~f~~~~SE~el~r~~~~La~kn~~~~~~~~~LGsCTmK~n~~~~~~p~s~~eF~t~--hPyq-p~e 536 (954)
T PRK12566 460 PAVLQRRTAYLQHPVFNAHHSETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNATSEMIPITWPEFAQL--HPFA-PRE 536 (954)
T ss_pred chhhhcCCccccCcccccCCCHHHHHHHHHHHHhcCcCcccCcccCcccccCcCcHHhhhcccchhhhcC--CCCC-chh
Confidence 444443333 34453 4579999999999987777665555667775 33223344455666665 2222 224
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcC-CchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHH
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQG-TTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSAL 185 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~-ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 185 (486)
.+.+.-++-.++.+|+++++|++.. .+.. +|+++++.++++.|.....+ |.. .+.+|+++...|.+.
T Consensus 537 ~sQG~lq~i~elq~~l~eLtGmd~~---------Sl~p~sGA~gE~A~Lmair~yh~~~-Ge~--~r~~vLIp~saHgtN 604 (954)
T PRK12566 537 QAEGYRAMIDELEAWLCAITGFDAI---------CMQPNSGAQGEYAGLLAIRRYHRSR-GQS--QRDICLIPSSAHGTN 604 (954)
T ss_pred hhcCHHHHHHHHHHHHHHHHCCCeE---------eecCCchHHHHHHHHHHHHHHHHhc-CCC--CCCEEEecccccccC
Confidence 4555555556667999999999853 4444 77888988888877543322 222 467888999999887
Q ss_pred HHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEe
Q 038818 186 QKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHV 265 (486)
Q Consensus 186 ~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhv 265 (486)
...+...|+ +++.||+|+ +|.+|+++|++++++.. ....+|+++++++..+..+|+++|+++|+++|+++++
T Consensus 605 pasa~~~Gi---eVv~Vp~D~--~G~iDle~L~a~I~~~~---~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~v 676 (954)
T PRK12566 605 PASAQMAGM---RVVIVECDP--DGNVDLDDLKAKAAAAG---DRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYM 676 (954)
T ss_pred HHHHHHCCC---EEEEeccCC--CCCcCHHHHHHHhhccC---CCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEE
Confidence 777888899 999999985 56999999999997321 1245788888888777778899999999999999999
Q ss_pred eccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeC---chHHHHHhcCCcccccCccCCCCCccCCC
Q 038818 266 DAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKN---PNALIKALSTNPEFLRNKASDSKQVVDYK 342 (486)
Q Consensus 266 D~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~---~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 342 (486)
|+|+..+......... -++|++++++||||+.|.|.|..++.. ++.+...+...|. .... +.....+
T Consensus 677 DgA~~~a~~~l~~Pg~-----~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~-~d~~----G~~~r~g 746 (954)
T PRK12566 677 DGANLNAQVGLARPAD-----IGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPV-VPVE----GPDPNNG 746 (954)
T ss_pred EeeChhhccCCCChhh-----cCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCC-cCCC----CCCCCCC
Confidence 9999644433322122 289999999999999999999888765 1222222221111 0000 0000011
Q ss_pred CccccCCCCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC----CCeeEEEEEeecCCCCCCC
Q 038818 343 DWQITLSRRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP----RNFAVVCFRVLPSASGLGD 417 (486)
Q Consensus 343 ~~~~~~sr~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~----~~~~~v~f~~~~~~~~~~~ 417 (486)
.....+.-.+ -++..|..++.+|.+ +.+.......+++|++++|.+. +++... +..+.+.+...+....
T Consensus 747 a~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~--~~v~~~~~~~~~~hEfii~~~~l~~~--- 820 (954)
T PRK12566 747 AVSAAPWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGA--FPVLYRGRNERVAHECILDLRPLKAQ--- 820 (954)
T ss_pred ceeecccchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhh--CCCCcCCCCCCeeeEEEEEccccccc---
Confidence 1111111111 146778889999999 8888888899999999999774 444332 2234444444321100
Q ss_pred CCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 418 GKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 418 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
.... ...+.++|.+.|+.... ..+...+.+|++.+ ...+++|||+++++|+.+.+++.
T Consensus 821 --~g~~----~~dvakRL~d~Gihapt-~~fPv~~~LmIepT-E~eskeEIDrf~eAL~~I~~e~~ 878 (954)
T PRK12566 821 --TGIS----EEDVAKRLMDYGFHAPT-MSFPVPGTLMVEPT-ESESKAELDRFVEAMLSIRAEIG 878 (954)
T ss_pred --cCCC----HHHHHHHHHHCCcEEeE-EeeccCCEEEEEee-eeCCHHHHHHHHHHHHHHHHHHH
Confidence 0011 23466666677864222 23345678999995 57788899999999999988754
No 45
>PRK14012 cysteine desulfurase; Provisional
Probab=99.95 E-value=2.8e-26 Score=232.11 Aligned_cols=309 Identities=14% Similarity=0.125 Sum_probs=205.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH-
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI- 191 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~- 191 (486)
..-.++++++++++|.+.+ .+++++|||+++..++.+......+ +++.|+++..+|+++..++..
T Consensus 49 ~~~~~~r~~ia~~~g~~~~-------~v~~~~g~t~al~~~l~~l~~~~~~-------~gd~Vi~~~~~~~s~~~~~~~~ 114 (404)
T PRK14012 49 EAVDIARNQIADLIGADPR-------EIVFTSGATESDNLAIKGAAHFYQK-------KGKHIITSKTEHKAVLDTCRQL 114 (404)
T ss_pred HHHHHHHHHHHHHcCcCcC-------eEEEeCCHHHHHHHHHHHHHHhhcC-------CCCEEEEecCccHHHHHHHHHH
Confidence 3445678899999998765 6899999999998887765432111 567788899999998666554
Q ss_pred --cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccc
Q 038818 192 --AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 192 --~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
.|+ +++.+++++ ++.+|+++|+++|++++ .+|++++.+|++|.+.|+++|.++|+++|+++|+|+|+
T Consensus 115 ~~~g~---~~~~v~~~~--~g~~d~~~l~~~i~~~t------~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~ 183 (404)
T PRK14012 115 EREGF---EVTYLDPQS--NGIIDLEKLEAAMRDDT------ILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQ 183 (404)
T ss_pred HhCCC---EEEEEccCC--CCcCCHHHHHHhcCCCC------EEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcch
Confidence 488 899999875 56899999999997543 47899999999999999999999999999999999999
Q ss_pred cchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCC
Q 038818 270 AGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLS 349 (486)
Q Consensus 270 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~s 349 (486)
+.+....+- .. .++|++++++||++ +|.|+|+++++++... ...+.+..... . ..++.+
T Consensus 184 ~~g~~~~~~-~~-----~~~D~~~~s~~K~~-gp~g~G~l~~~~~~~~----~~~~~~~g~~~-------~---~~~~~g 242 (404)
T PRK14012 184 SVGKVPIDL-SK-----LKVDLMSFSAHKIY-GPKGIGALYVRRKPRV----RLEAQMHGGGH-------E---RGMRSG 242 (404)
T ss_pred hcCCcccCc-cc-----CCCCEEEEehhhcc-CCCceEEEEEecCCCC----CCCceecCCCc-------c---CCccCC
Confidence 876554321 11 26999999999955 5789999999876331 11121111100 0 001111
Q ss_pred -CCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC--C---eeEEEEEeecCCCCCCCCCCcc
Q 038818 350 -RRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR--N---FAVVCFRVLPSASGLGDGKANE 422 (486)
Q Consensus 350 -r~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~--~---~~~v~f~~~~~~~~~~~~~~~~ 422 (486)
... ..+++-.++... ..++.+..++..++++++.+.|++++++++..+. . ...+.|...+.
T Consensus 243 t~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~----------- 310 (404)
T PRK14012 243 TLPTHQIVGMGEAARIA-KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVEG----------- 310 (404)
T ss_pred CcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcCH-----------
Confidence 111 112222333332 3456677888999999999999999888876431 1 12344443211
Q ss_pred chHHHHHHHHHHHHhcCcEEEeee-------------eECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 423 GANELNRKLLESINASGQLYVSHG-------------MVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 423 ~~~~~~~~l~~~l~~~g~~~~~~~-------------~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
+++...+.+.....|..+.... .......+|+++ ++.+|++|||++++.|+++++.+
T Consensus 311 --~~~~~~l~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~-~~~~t~~dvd~~~~~l~~~~~~~ 380 (404)
T PRK14012 311 --ESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSL-GRFTTEEEIDYAIELVRKSIGKL 380 (404)
T ss_pred --HHHHHhCCCeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEe-cCCCCHHHHHHHHHHHHHHHHHH
Confidence 2222222111111222111100 001136899999 46789999999999999988765
No 46
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.95 E-value=1.4e-25 Score=226.80 Aligned_cols=340 Identities=13% Similarity=0.126 Sum_probs=221.8
Q ss_pred CcceecCCCCCHHHHHHHHHHhhcCC---C-ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHH
Q 038818 75 YYFAYFPSSGSIAGFLGEMLSSGFNV---V-GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAI 150 (486)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~n~---~-~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~ 150 (486)
.|+++...++.++.+ .+.+...+.. + ...|..+....++..++++.+++++|.++. ..++++|+|+++
T Consensus 19 ~yl~~~~~~~~p~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~-------~v~~~~~~t~~l 90 (397)
T TIGR01976 19 VFFDNPAGTQIPQSV-ADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPP-------EVVFGANATSLT 90 (397)
T ss_pred EEecCCccCCCCHHH-HHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCC-------eEEEeCCHHHHH
Confidence 577765444444444 3444333311 1 122333334556677899999999998764 578899988887
Q ss_pred HHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH----HHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHH
Q 038818 151 LCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ----KAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQ 226 (486)
Q Consensus 151 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~----~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~ 226 (486)
...+.+..... .+++.|+++...|+|.. ..++..|+ +++.++++++ ++.+|+++|++++++.
T Consensus 91 ~~~~~~~~~~~--------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~~~~~l~~~i~~~-- 156 (397)
T TIGR01976 91 FLLSRAISRRW--------GPGDEVIVTRLDHEANISPWLQAAERAGA---KVKWARVDEA-TGELHPDDLASLLSPR-- 156 (397)
T ss_pred HHHHHHHHhcC--------CCCCEEEEcCCchHhHHHHHHHHHHhcCC---EEEEEecccc-CCCcCHHHHHHhcCCC--
Confidence 54444332110 15677888889998754 55677898 9999998752 4689999999998653
Q ss_pred CCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcc
Q 038818 227 AGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDC 306 (486)
Q Consensus 227 ~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~ 306 (486)
+.+|++++++|++|.+.|+++|+++|+++|+++++|+++..+....+ ... .++|.+++++|||++ |. +
T Consensus 157 ----~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~-~~~-----~~~d~~~~s~~K~~g-~~-~ 224 (397)
T TIGR01976 157 ----TRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLID-VQA-----TGADFLTCSAYKFFG-PH-M 224 (397)
T ss_pred ----ceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCC-HHH-----cCCCEEEEechhhcC-Cc-e
Confidence 34799999999999999999999999999999999999865433221 111 168999999999985 43 8
Q ss_pred eEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCC-CCC-CchHHHHHHHHhchH--------------HHH
Q 038818 307 CCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLS-RRF-RALKLWLVLRSFGVA--------------NLR 370 (486)
Q Consensus 307 g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~s-r~~-~~l~~~~~l~~~g~~--------------g~~ 370 (486)
|+++++++ .+.........+..... ...++.| +.+ ..+++..+++.+... +++
T Consensus 225 G~l~~~~~-~~~~l~~~~~~~~~~~~----------~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~ 293 (397)
T TIGR01976 225 GILWGRPE-LLMNLPPYKLTFSYDTG----------PERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQ 293 (397)
T ss_pred EEEEEcHH-HHhhCCCccccCccCCC----------cchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHH
Confidence 88888755 22221111111111100 0011222 222 223445555544222 366
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEecC----CCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeee
Q 038818 371 NFLRSHVRMAQLFQELVGGDNRFEIVAP----RNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHG 446 (486)
Q Consensus 371 ~~~~~~~~~a~~l~~~L~~~~~~~~~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~ 446 (486)
+..++..++++++++.|+++++++++.+ ...+++.|.+.+.. ...+.++|.++|+.+-...
T Consensus 294 ~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~l~~~L~~~gI~v~~~~ 358 (397)
T TIGR01976 294 AIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHGLP---------------PQRVVRRLADQGIDAWAGH 358 (397)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCCcC---------------HHHHHHHHHHCCeEEEeCc
Confidence 7788888999999999999878998764 25678887764321 2356777777787533221
Q ss_pred e----------E-CCEeEEEEEecCCCCcHHHHHHHHHHH
Q 038818 447 M----------V-AGIYFIRFAVGATLTEDRHVIAAWKVV 475 (486)
Q Consensus 447 ~----------~-~~~~~lR~~~~~~~tt~~did~~i~~l 475 (486)
. . .+..++|+|++ +++|++||++++++|
T Consensus 359 ~~~~~~~~~~~~~~~~~~iRis~~-~~~t~~di~~l~~~l 397 (397)
T TIGR01976 359 FYAVRLLRRLGLNDEGGVVRVGLA-HYNTAEEVDRLLEAL 397 (397)
T ss_pred cchHHHHHHhCCCCCCCeEEEEee-ccCCHHHHHHHHHhC
Confidence 1 1 13468999995 578888999999864
No 47
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.95 E-value=1.3e-25 Score=224.19 Aligned_cols=349 Identities=9% Similarity=0.058 Sum_probs=228.9
Q ss_pred ceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHH
Q 038818 77 FAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAA 156 (486)
Q Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~ 156 (486)
+=+.|++......+.+.+...+. .+ .+.+..+..++++.+++++|.+++. ...++|+|||+++..++..
T Consensus 5 ~l~~pgp~~~~~~v~~~~~~~~~----~~--~~~~~~~~~~~r~~la~l~~~~~~~-----~~i~~t~~~t~al~~~~~~ 73 (363)
T TIGR02326 5 LLLTPGPLTTSRTVKEAMLFDWC----TW--DSDYNIVVEQIRQQLLALATAEEGY-----TSVLLQGSGTFAVEAVIGS 73 (363)
T ss_pred eEecCCCCCCCHHHHHHhCCCCC----CC--ChHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCCCHHHHHHHHHh
Confidence 33567766665555554433331 22 2456666778999999999997531 1578999999999777655
Q ss_pred HHHHHHHHccccCCCCeEEEecCCCchH-HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEE
Q 038818 157 ARDQILNEIGRENISRLVVYGSDQTHSA-LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLC 235 (486)
Q Consensus 157 a~~~~~~~~~~~~~~~~~v~~s~~~H~s-~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv 235 (486)
.... ++.+++++...|.+ +.+.++..|+ +++.+|+++ ++.+|++++++++++.++ +.+|.
T Consensus 74 l~~~----------~~~vlv~~~~~~~~~~~~~a~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~~~----~~~v~ 134 (363)
T TIGR02326 74 AVPK----------DGKLLVVINGAYGARIVQIAEYLGI---PHHVVDTGE--VEPPDVVEVEAILAADPA----ITHIA 134 (363)
T ss_pred cCCC----------CCeEEEEeCChhhHHHHHHHHHcCC---ceEEEeCCC--CCCCCHHHHHHHHhhCCC----ccEEE
Confidence 4321 44556656555555 4677888999 999999875 458999999999875321 33678
Q ss_pred eecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCch
Q 038818 236 ATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPN 315 (486)
Q Consensus 236 ~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~ 315 (486)
+++++|++|.+.|+++|+++|+++|++++||++++.+....+ . ..+ ++|.++.++|||+++|.|.|+++++++.
T Consensus 135 ~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~-~----~~~-~~D~~~~s~~K~l~~p~G~G~l~~~~~~ 208 (363)
T TIGR02326 135 LVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPID-I----AEL-HIDYLISSANKCIQGVPGFGFVIARQAE 208 (363)
T ss_pred EEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcccc-h----hhc-CccEEEecCccccccCCcceEEEECHHH
Confidence 888999999999999999999999999999998875544332 1 112 6899999999999999999999998764
Q ss_pred HHHHHhcCCcccccCcc--CCC-CCccCCCCccccCCCCCCchHHHHHHHHhchH-HHHHHHHHHHHHHHHHHHHHhCCC
Q 038818 316 ALIKALSTNPEFLRNKA--SDS-KQVVDYKDWQITLSRRFRALKLWLVLRSFGVA-NLRNFLRSHVRMAQLFQELVGGDN 391 (486)
Q Consensus 316 ~~~~~~~~~~~y~~~~~--~~~-~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~ 391 (486)
. .+......++..... ... ....+...++. -....+++..+++.+..+ +++++.++..++++++++.|+++
T Consensus 209 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~---~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~- 283 (363)
T TIGR02326 209 L-AACKGNARSLSLDLYDQWRCMEDNHGKWRFTS---PTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL- 283 (363)
T ss_pred H-HHhhcCCCceeecHHHHHHHHhccCCCCCCCC---cHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-
Confidence 3 222111111100000 000 00000000110 011224555566665444 47888899999999999999887
Q ss_pred CeEEecCC--CeeE-EEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHH
Q 038818 392 RFEIVAPR--NFAV-VCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHV 468 (486)
Q Consensus 392 ~~~~~~~~--~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~di 468 (486)
+++++.++ ..++ ++|.+.+.. ......+.+.|.++|+. +.++...+..++|++++. ..+.+|+
T Consensus 284 g~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~v~~~L~~~gi~-v~~g~~~~~~~iRi~~~~-~~~~edv 349 (363)
T TIGR02326 284 GFEPLLDDEIQSPIITSFYSPEDP------------DYRFADFYQRLKEQGFV-IYPGKVSQVDCFRIGNIG-EVDAADI 349 (363)
T ss_pred CCeeccCcccCCceEEEEECCCCC------------CCCHHHHHHHHHHCCEE-EECCcCCCCCEEEEecCC-CCCHHHH
Confidence 78876543 3444 456654310 00123566777777875 443322234689999865 5678899
Q ss_pred HHHHHHHHHHHH
Q 038818 469 IAAWKVVQEKLD 480 (486)
Q Consensus 469 d~~i~~l~~~~~ 480 (486)
++++++|++++.
T Consensus 350 ~~~l~~l~~~l~ 361 (363)
T TIGR02326 350 TRLLTAIGKAMY 361 (363)
T ss_pred HHHHHHHHHHhC
Confidence 999999988753
No 48
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.95 E-value=1.3e-24 Score=216.75 Aligned_cols=310 Identities=14% Similarity=0.106 Sum_probs=207.9
Q ss_pred HHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCC
Q 038818 115 ENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGI 194 (486)
Q Consensus 115 e~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~ 194 (486)
-+++.+.+++++|. + ..++++|||+++..++.+... ++..|+++..+|++...+++..|+
T Consensus 46 ~~~l~~~la~~~g~--~-------~i~~~~g~t~al~~~l~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~g~ 105 (361)
T cd06452 46 IKDFHHDLAEFLGM--D-------EARVTPGAREGKFAVMHSLCE-----------KGDWVVVDGLAHYTSYVAAERAGL 105 (361)
T ss_pred HHHHHHHHHHHcCC--c-------eEEEeCCHHHHHHHHHHHhcC-----------CCCEEEEcCCcchHHHHHHHhcCC
Confidence 34566778999998 2 578999999998877766532 567788899999999989999999
Q ss_pred CCCCeEEEecCCCCCcccCHHHHHHHHHHHHHC-CCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchh
Q 038818 195 DPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQA-GLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSA 273 (486)
Q Consensus 195 g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~-g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~ 273 (486)
+++.+|++.++++.+|+++|++++++..++ +..+.+|++++++|++|.+.|+++|.++|+++|+++|+|+||+.+.
T Consensus 106 ---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~ 182 (361)
T cd06452 106 ---NVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGR 182 (361)
T ss_pred ---EEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCC
Confidence 999999986445699999999999764322 2235688899999999999999999999999999999999997654
Q ss_pred ccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccc-cCCCC-
Q 038818 274 CICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQI-TLSRR- 351 (486)
Q Consensus 274 ~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~-~~sr~- 351 (486)
...+. .. .++|.++.++||++++|.++|+++++++ ...+......+|-. ...+. ..+.+
T Consensus 183 ~~~~~-~~-----~~~d~~~~s~~K~l~~~~~~G~l~~~~~-~~~~l~~~~~~~~~------------~~~~~~~~~~~~ 243 (361)
T cd06452 183 MPVSG-KE-----LGADFIVGSGHKSMAASAPIGVLATTEE-WADIVFRTSQMFKI------------KEVELLGCTLRG 243 (361)
T ss_pred cCCCH-HH-----cCCCEEEecCCccccCCCCeEEEEECHH-HHHHHhcccccccc------------ceeeeeccccCc
Confidence 32221 11 1589999999999998888998888654 33332222211100 00010 11111
Q ss_pred CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEec--CCCeeEEEEEeecCCCCCCCCCCccchHHHHH
Q 038818 352 FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVA--PRNFAVVCFRVLPSASGLGDGKANEGANELNR 429 (486)
Q Consensus 352 ~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~--~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 429 (486)
..+..++.++..+ .+.+ +...+..++++++++.|+++|+++++. +...+++.|........ .........
T Consensus 244 ~~~~~~~~al~~~-~~~~-~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~------~~~~~~~~~ 315 (361)
T cd06452 244 APLVTLMASFPHV-KERV-KRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEI------AKKHKRRGY 315 (361)
T ss_pred hHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchh------hhhccccch
Confidence 1233444444432 2333 345555677899999999999999874 33456666665411000 000000112
Q ss_pred HHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 430 KLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 430 ~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
++.+.|.++|+... . .....++|++++ ..+++|++.++++|+++.
T Consensus 316 ~~~~~L~~~gI~~~-~--~~~~~~~ri~~~--g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 316 FLYSELKKRGIHGI-K--PGLTRYFKLSTY--GLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred hHHHHHHHcCceEE-c--CCCceEEEEEec--CCCHHHHHHHHHHHHHHh
Confidence 57777877887521 1 122347898874 357789999999998764
No 49
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.94 E-value=6.9e-24 Score=211.95 Aligned_cols=311 Identities=14% Similarity=0.121 Sum_probs=207.3
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCC
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGID 195 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g 195 (486)
.++.+.+++++|.+. ..+++||++++..++.+... +++.|+++...|++...+++..|+
T Consensus 54 ~~~~e~lA~~~g~~~---------~~i~~g~~~a~~~~~~~l~~-----------~gd~Vl~~~~~h~s~~~~~~~~g~- 112 (370)
T TIGR02539 54 HDFLEDLAEFLGMDE---------ARVTHGAREGKFAVMHALCK-----------EGDWVVLDGLAHYTSYVAAERAGL- 112 (370)
T ss_pred HHHHHHHHHHhCCCc---------eEEECChHHHHHHHHHHhhC-----------CCCEEEECCcccHHHHHHHHHcCC-
Confidence 345667999999874 46789999998776665532 567788899999999899999999
Q ss_pred CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCC-CccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhc
Q 038818 196 PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAG-LIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSAC 274 (486)
Q Consensus 196 ~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g-~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~ 274 (486)
+++.+|.+++.++.+|+++|+++|++.++.+ ..+.+|+++++++++|.+.|+++|+++|++||++++||+||+.+.+
T Consensus 113 --~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~ 190 (370)
T TIGR02539 113 --NVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRM 190 (370)
T ss_pred --EEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCc
Confidence 9999998754468999999999997643221 2456788899999999999999999999999999999999986532
Q ss_pred cCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC-CC
Q 038818 275 ICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR-FR 353 (486)
Q Consensus 275 ~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~-~~ 353 (486)
..+ ... .++|.++.++||+++.+.++|+++.+++ ..........+|..... . .+..+.. ..
T Consensus 191 ~~~-~~~-----~~~di~v~s~sK~~~~~g~~G~l~~~~~-~i~~l~~~~~~~~~~~~-------~----~~~~~~~~~~ 252 (370)
T TIGR02539 191 PVS-AKE-----IGADFIVGSGHKSMAASGPCGVLGMSEE-WEDIVLRKSRYSPVKEV-------E----LLGCTSRGAP 252 (370)
T ss_pred CCC-HHH-----cCCCEEEeeCcccccCCCCEEEEEECHH-HHhhhcccccCCcccee-------e----eecccccccH
Confidence 221 111 1589999999999997777898887654 33322222222221110 0 0011111 12
Q ss_pred chHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe--cCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHH
Q 038818 354 ALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIV--APRNFAVVCFRVLPSASGLGDGKANEGANELNRKL 431 (486)
Q Consensus 354 ~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~--~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l 431 (486)
+..++.++... .+.+ +...+..+++++|++.|+++ +++++ .++.++++.+.+...... ..........+
T Consensus 253 ~~~~~~al~~~-~~~l-~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~~~~~------~~~~~~~~~~~ 323 (370)
T TIGR02539 253 IVTMMASFPHV-VERV-KRWDEEVKKTRWFVAELEDI-GFIQLGQKPKEHDLVKFETPGFHEI------AQKHKRRGYFL 323 (370)
T ss_pred HHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHhC-CcEEEccCCCcCceEEEECCchhHH------hhhhccccHHH
Confidence 22333333221 2222 22344566678999999998 78874 355677887775321000 00001123457
Q ss_pred HHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 432 LESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 432 ~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
.+.|.++|+..+.+ ....++|++++ ..+++|++++++.|+++.++
T Consensus 324 ~~~L~e~GI~~ir~---~~~~~iRis~~--~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 324 YEELKKRGIHGIRS---GQTKYFKLSVY--GLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred HHHHHhCCCccccC---CcceEEEEEec--CCCHHHHHHHHHHHHHHHHh
Confidence 77888889842322 22458999984 34788999999999988765
No 50
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.94 E-value=3.2e-24 Score=213.69 Aligned_cols=346 Identities=11% Similarity=0.091 Sum_probs=222.0
Q ss_pred ecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHH
Q 038818 79 YFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAAR 158 (486)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~ 158 (486)
|.|++...+..+.+.+...++. + ++.+..+..++++.+++++|.++.. ...++++|||+++..++....
T Consensus 3 ~~p~p~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~la~~~~~~~~~-----~~i~~~~~gt~~l~~~~~~~~ 71 (355)
T TIGR03301 3 LTPGPLSTSATVRDAMLVDWCH----W--DSEFNDVTDQVRDRLLALAGGDDNH-----TCVLLQGSGTFAVEATIGSLV 71 (355)
T ss_pred CcCCCCCCCHHHHHHhhhhccC----C--CHHHHHHHHHHHHHHHHHhcCCCCC-----cEEEEeCCcHHHHHHHHHhcc
Confidence 3456666666666665543322 2 2334467778999999999998641 146789999999887776654
Q ss_pred HHHHHHccccCCCCeEEEecCCCchH-HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEee
Q 038818 159 DQILNEIGRENISRLVVYGSDQTHSA-LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCAT 237 (486)
Q Consensus 159 ~~~~~~~~~~~~~~~~v~~s~~~H~s-~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~ 237 (486)
.. ++.+++++...|.+ +..+++..|+ +++.++.+. ++.+|++++++++++.+ ...+|+.+
T Consensus 72 ~~----------~~~vi~~~~~~~~~~~~~~a~~~g~---~~~~i~~~~--~~~~d~~~l~~~l~~~~----~~~~v~~~ 132 (355)
T TIGR03301 72 PR----------DGKLLVLINGAYGERLAKICEYLGI---PHTDLNFSE--YEPPDLNRIEEALAADP----DITHVATV 132 (355)
T ss_pred CC----------CCeEEEECCCchhhHHHHHHHHcCC---ceEEEecCC--CCCCCHHHHHHHHHhCC----CceEEEEE
Confidence 31 33445555444443 5677888999 999999874 45899999999987532 24467788
Q ss_pred cCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHH
Q 038818 238 VGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNAL 317 (486)
Q Consensus 238 ~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~ 317 (486)
+++|++|.+.|+++|+++|++||+++++|++++.+....+ +.. -++|.++.++|||+++|.|+|+++++++. +
T Consensus 133 ~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~-----~~~-~~~d~~~~s~~K~l~~~~G~g~~~~~~~~-~ 205 (355)
T TIGR03301 133 HHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPID-----IEE-LDVDALIASANKCLEGVPGFGFVIARRDL-L 205 (355)
T ss_pred ecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCcccc-----hhh-cCccEEEecCCcccccCCceeEEEECHHH-H
Confidence 8999999999999999999999999999998754432211 111 16899999999999988899999987653 2
Q ss_pred HHHhcCCcccccCccCCCCCccCCCCccccCCCC-CCchHHHHHHHHhchHH-HHHHHHHHHHHHHHHHHHHhCCCCeEE
Q 038818 318 IKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR-FRALKLWLVLRSFGVAN-LRNFLRSHVRMAQLFQELVGGDNRFEI 395 (486)
Q Consensus 318 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~ 395 (486)
........++............... ....+.. ....++..+++.+..++ +.+..++..++++++.+.|+++ ++++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~~ 282 (355)
T TIGR03301 206 EASAGNARSLYLDLYDQWAYMEKTG--KWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-GFQP 282 (355)
T ss_pred HHhhCCCCCceeeHHHHHHHhhhcC--CCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-CCee
Confidence 3221111111111000000000000 0000111 11133445666665555 8888899999999999999887 7887
Q ss_pred ecCCC--ee-EEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHH
Q 038818 396 VAPRN--FA-VVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAW 472 (486)
Q Consensus 396 ~~~~~--~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i 472 (486)
+.++. .+ +++|++.+.. .....++.+++.++|+. +.+.......++|++++ ..++++|+++++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~l~~~gi~-i~~~~~~~~~~iRis~~-~~~~~~~i~~~~ 348 (355)
T TIGR03301 283 LLPERWQSPIIVSFLYPDDP------------DFDFDDFYQELKERGFV-IYPGKLTLADTFRIGTI-GEIDAADIERLL 348 (355)
T ss_pred ecCCCCCCCcEEEEECCCCC------------cchHHHHHHHHHHCCEE-EECCccccccEEEEecC-CCCCHHHHHHHH
Confidence 65432 23 3455554211 01124667777778875 33332222368999985 467888999999
Q ss_pred HHHHHH
Q 038818 473 KVVQEK 478 (486)
Q Consensus 473 ~~l~~~ 478 (486)
+.|+++
T Consensus 349 ~~l~~~ 354 (355)
T TIGR03301 349 EAIKDA 354 (355)
T ss_pred HHHHhh
Confidence 999875
No 51
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.94 E-value=2.3e-24 Score=208.15 Aligned_cols=324 Identities=15% Similarity=0.096 Sum_probs=231.1
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH-
Q 038818 106 MSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA- 184 (486)
Q Consensus 106 ~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s- 184 (486)
..+|.+..+.+++.+.+..+|+.+..+ ..+++++||.+...++..... +++.|++....-++
T Consensus 31 h~s~~F~~~~~~~~~~L~~v~~t~~~~------~~ll~gsGt~amEAav~sl~~-----------pgdkVLv~~nG~FG~ 93 (383)
T COG0075 31 HRSPDFVGIMKEVLEKLRKVFGTENGD------VVLLSGSGTLAMEAAVASLVE-----------PGDKVLVVVNGKFGE 93 (383)
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCCc------EEEEcCCcHHHHHHHHHhccC-----------CCCeEEEEeCChHHH
Confidence 456889999999999999999988542 567788988777666655544 55556655566654
Q ss_pred -HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceE
Q 038818 185 -LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWV 263 (486)
Q Consensus 185 -~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~l 263 (486)
+...++.+|. +++.+.+.+.. .+|+++++++|+++.. ..+|.++++.|+||.++|+++|+++||+||..+
T Consensus 94 R~~~ia~~~g~---~v~~~~~~wg~--~v~p~~v~~~L~~~~~----~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~ 164 (383)
T COG0075 94 RFAEIAERYGA---EVVVLEVEWGE--AVDPEEVEEALDKDPD----IKAVAVVHNETSTGVLNPLKEIAKAAKEHGALL 164 (383)
T ss_pred HHHHHHHHhCC---ceEEEeCCCCC--CCCHHHHHHHHhcCCC----ccEEEEEeccCcccccCcHHHHHHHHHHcCCEE
Confidence 8889999999 99999988644 8999999999995432 448999999999999999999999999999999
Q ss_pred EeeccccchhccC--ccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcc-cccC-ccCC-CCCc
Q 038818 264 HVDAAYAGSACIC--PEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPE-FLRN-KASD-SKQV 338 (486)
Q Consensus 264 hvD~a~g~~~~~~--~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~-y~~~-~~~~-~~~~ 338 (486)
+||+.-+.+.... +++ ++|.+...++|++++|+|.|++.++++.+- .......+ |..+ .... ....
T Consensus 165 iVDaVsS~Gg~~~~vd~w--------giDv~itgSQK~l~~PPGla~v~~S~~a~e-~~~~~~~~~~ylDL~~~~~~~~~ 235 (383)
T COG0075 165 IVDAVSSLGGEPLKVDEW--------GIDVAITGSQKALGAPPGLAFVAVSERALE-AIEERKHPSFYLDLKKWLKYMEK 235 (383)
T ss_pred EEEecccCCCcccchhhc--------CccEEEecCchhccCCCccceeEECHHHHH-HHhcCCCCceeecHHHHHHHHhh
Confidence 9998765433322 222 899999999999999999999999988653 23332222 3222 1100 0000
Q ss_pred cCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC--CeeEEEEEeecCCCCCC
Q 038818 339 VDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR--NFAVVCFRVLPSASGLG 416 (486)
Q Consensus 339 ~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~--~~~~v~f~~~~~~~~~~ 416 (486)
....++|... ....++..+++.+-.+|++.+++++.++++++++.++++ ||+++.++ .+++++....|.+.
T Consensus 236 ~~~~p~Tppv---~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~~P~g~--- 308 (383)
T COG0075 236 KGSTPYTPPV---NLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIKVPEGV--- 308 (383)
T ss_pred cCCCCCCCCH---HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEECCCCC---
Confidence 0111111111 022567778888888999999999999999999999998 89998743 24444444444321
Q ss_pred CCCCccchHHHHHHHHHHHHhcCcEEEeee-eECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 417 DGKANEGANELNRKLLESINASGQLYVSHG-MVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 417 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
+ .+++...+.+++.+.+++. .......+||..|. ..+.+|+..++.+|..+++++
T Consensus 309 --------~--~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG-~~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 309 --------D--DKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMG-NVRPEDVLAALAALEAALREL 364 (383)
T ss_pred --------C--cHHHHHHHHHhCCEEecccccccCccEEEEecCc-cCCHHHHHHHHHHHHHHHHHc
Confidence 1 1222334444444445443 22234589999998 888889999999999998765
No 52
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.93 E-value=6e-24 Score=212.72 Aligned_cols=347 Identities=12% Similarity=0.069 Sum_probs=225.5
Q ss_pred ecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHH
Q 038818 79 YFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAAR 158 (486)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~ 158 (486)
+.|++......+.+.+...+ ..+ ++.+.+...++++.+++++|.+++. ...+++++||+++..++....
T Consensus 9 ~~pgP~~~~~~~~~a~~~~~----~~~--~~~~~~~~~~~~~~l~~l~~~~~~~-----~~i~~~~~gt~~l~~~~~~l~ 77 (368)
T PRK13479 9 LTPGPLTTSRTVREAMLRDW----GSW--DDDFNALTASVRAKLVAIATGEEGY-----TCVPLQGSGTFSVEAAIGSLV 77 (368)
T ss_pred ecCCCCCCCHHHHHHhCCCC----CCC--ChHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCCcHHHHHHHHHhcc
Confidence 55665555554544443332 222 3445567788999999999986531 147789999999877766653
Q ss_pred HHHHHHccccCCCCeEEEecCCCchHH--HHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEe
Q 038818 159 DQILNEIGRENISRLVVYGSDQTHSAL--QKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCA 236 (486)
Q Consensus 159 ~~~~~~~~~~~~~~~~v~~s~~~H~s~--~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~ 236 (486)
. ++..+++....++.. ...++..|+ +++.+|.++ ++.+|++++++++++..+ ..+|.+
T Consensus 78 ~-----------~~~~vlv~~~~~~~~~~~~~~~~~g~---~~~~i~~~~--~~~~d~~~l~~~l~~~~~----~~~v~~ 137 (368)
T PRK13479 78 P-----------RDGKVLVPDNGAYGARIAQIAEYLGI---AHVVLDTGE--DEPPDAAEVEAALAADPR----ITHVAL 137 (368)
T ss_pred C-----------CCCeEEEEeCCchHHHHHHHHHHcCC---cEEEEECCC--CCCCCHHHHHHHHHhCCC----CcEEEE
Confidence 2 333444444555553 578888999 999999875 458999999999875321 336788
Q ss_pred ecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchH
Q 038818 237 TVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNA 316 (486)
Q Consensus 237 ~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~ 316 (486)
++++|++|.+.|+++|.++|+++|++++||++++.+....+ +.. .++|.++.++|||+++|.|+|+++++++..
T Consensus 138 ~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~-----~~~-~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~ 211 (368)
T PRK13479 138 VHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPID-----IAE-LGIDALISSANKCIEGVPGFGFVIARRSEL 211 (368)
T ss_pred EcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCcccc-----ccc-cCceEEEecCccccccCCCceEEEECHHHH
Confidence 99999999999999999999999999999987754332211 111 168999999999999999999999976532
Q ss_pred HHHHhcCCcccccCcc--CCCCCccCCCCccccCCCC-CCchHHHHHHHHhchH-HHHHHHHHHHHHHHHHHHHHhCCCC
Q 038818 317 LIKALSTNPEFLRNKA--SDSKQVVDYKDWQITLSRR-FRALKLWLVLRSFGVA-NLRNFLRSHVRMAQLFQELVGGDNR 392 (486)
Q Consensus 317 ~~~~~~~~~~y~~~~~--~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~~ 392 (486)
........+|..+.. ...........+ +.. ....++..++..+..+ ++++..++..++++++++.|+++ +
T Consensus 212 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 285 (368)
T PRK13479 212 -EACKGNSRSLSLDLYDQWAYMEKTGQWRF----TPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-G 285 (368)
T ss_pred -HHhhcCCCCeeecHHHHHhhhcccCCCCC----CCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 222222222211100 000000000001 111 1223455566655444 47888899999999999999988 7
Q ss_pred eEEecCCC--e-eEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHH
Q 038818 393 FEIVAPRN--F-AVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVI 469 (486)
Q Consensus 393 ~~~~~~~~--~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did 469 (486)
++++.++. . .+++|.+.... +....++.+.|.++|+.+ .+.......++|++++. .++++|++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~l~~~L~~~gi~v-~~g~~~~~~~iRis~~~-~~t~edi~ 351 (368)
T PRK13479 286 FEPLLDAEIQSPIIVTFHAPADP------------AYDFKEFYERLKEQGFVI-YPGKLTQVDTFRIGCIG-DVDAADIR 351 (368)
T ss_pred CcccCCchhcCceEEEEECCCCC------------CcCHHHHHHHHHHCCEEE-ecCCCCCCCEEEEecCC-CCCHHHHH
Confidence 88764432 2 24666654321 001246777788888754 33322224579998754 56788999
Q ss_pred HHHHHHHHHHHHH
Q 038818 470 AAWKVVQEKLDGI 482 (486)
Q Consensus 470 ~~i~~l~~~~~~l 482 (486)
+++++|+++++++
T Consensus 352 ~~l~~L~~~l~~~ 364 (368)
T PRK13479 352 RLVAAIAEALYWM 364 (368)
T ss_pred HHHHHHHHHHHHc
Confidence 9999999988765
No 53
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.93 E-value=7.7e-24 Score=210.69 Aligned_cols=257 Identities=11% Similarity=0.085 Sum_probs=183.7
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH
Q 038818 108 SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK 187 (486)
Q Consensus 108 ~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 187 (486)
+.....+..++++++++++|.+++ .+++++|+|+++..++......... .++..|+++...|+|+..
T Consensus 37 ~~~~~~~~~~~r~~la~~~g~~~~-------~v~~~~g~t~a~~~~l~~l~~~~~~------~g~~~vi~~~~~~~s~~~ 103 (353)
T TIGR03235 37 GHNAKKAVERARKQVAEALGADTE-------EVIFTSGATESNNLAILGLARAGEQ------KGKKHIITSAIEHPAVLE 103 (353)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCCHHHHHHHHHHHHHHhccc------CCCCeeeEcccccHHHHH
Confidence 334456677899999999999765 6899999999988777665432100 023678889999998765
Q ss_pred HH---HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEE
Q 038818 188 AA---QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVH 264 (486)
Q Consensus 188 a~---~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lh 264 (486)
.. +..|+ +++.+|+++ ++.+|+++|++++++. +.+|++++++|++|.+.|+++|+++|+++|+|+|
T Consensus 104 ~~~~~~~~G~---~v~~v~~~~--~~~~d~~~l~~~l~~~------~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~i 172 (353)
T TIGR03235 104 PIRALERNGF---TVTYLPVDE--SGRIDVDELADAIRPD------TLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFH 172 (353)
T ss_pred HHHHHHhcCC---EEEEEccCC--CCcCCHHHHHHhCCCC------CEEEEEEcccCCceeccCHHHHHHHHHHcCCEEE
Confidence 54 34577 999999875 4689999999988643 3578899999999999999999999999999999
Q ss_pred eeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCc
Q 038818 265 VDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDW 344 (486)
Q Consensus 265 vD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 344 (486)
||++++.+....+- .. .++|++++++|||+ +|.|+|+++++++.... ....+.+..... . .
T Consensus 173 vD~a~~~g~~~~~~-~~-----~~~D~~~~s~~K~~-gp~g~g~l~~~~~~~~~--~~~~~~~~~~~~---------~-~ 233 (353)
T TIGR03235 173 VDAAQVVGKITVDL-SA-----DRIDLISCSGHKIY-GPKGIGALVIRKRGKPK--APLKPIMFGGGQ---------E-R 233 (353)
T ss_pred EEchhhcCCccccc-cc-----cCCCEEEeehhhcC-CCCceEEEEEccCcccc--cccCceeeCCCC---------c-C
Confidence 99999876654431 11 27999999999985 68899999999763211 111221111100 0 0
Q ss_pred cccC-CCC-CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCC---eeEEEEEee
Q 038818 345 QITL-SRR-FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRN---FAVVCFRVL 409 (486)
Q Consensus 345 ~~~~-sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~---~~~v~f~~~ 409 (486)
.++. +.. ...+++..+++.+ .++.+++.++..++++++++.|++ ++++++.++. ..+++|.+.
T Consensus 234 ~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i~~~~~~ 301 (353)
T TIGR03235 234 GLRPGTLPVHLIVGMGEAAEIA-RRNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHILNFSID 301 (353)
T ss_pred ccccCCCChHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCEEEEEeC
Confidence 1111 111 1224455555544 357788889999999999999988 6999886542 346777654
No 54
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.93 E-value=8.7e-24 Score=216.10 Aligned_cols=313 Identities=10% Similarity=0.054 Sum_probs=202.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEc---CCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCch
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQ---GTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHS 183 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t---~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~ 183 (486)
.......+|..+++.++++||.+.+ ...++ +|||+||+.++.+... +++.|+++...|.
T Consensus 74 g~~~~~~iE~~ar~~~a~lf~a~~~-------~~~~~~~~~sgt~an~~v~~al~~-----------~gd~Ii~~~~ehg 135 (452)
T PTZ00094 74 GNEVVDKIENLCQKRALEAFGLDPE-------EWGVNVQPYSGSPANFAVYTALLQ-----------PHDRIMGLDLPSG 135 (452)
T ss_pred cchHHHHHHHHHHHHHHHHhCCCcc-------cceeecCCCchHHHHHHHHHHhcC-----------CCCEEEecccccC
Confidence 3344577887789999999999754 22344 7899999887776532 5678888989997
Q ss_pred HHHHHHHHc--------CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHH
Q 038818 184 ALQKAAQIA--------GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDI 255 (486)
Q Consensus 184 s~~~a~~~~--------G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i 255 (486)
+....+..+ |.+. ++..++++. ++.+|+++|++++++.. |.+|+++ .+.+|.+.|+++|+++
T Consensus 136 ~~l~~~~~l~~~~~~~~~~~~-~~~~~~~~~--~g~id~~~L~~~l~~~~-----~~lvi~~--~s~~g~~~di~~I~~i 205 (452)
T PTZ00094 136 GHLTHGFYTAKKKVSATSIYF-ESLPYQVNE--KGLIDYDKLEELAKAFR-----PKLIIAG--ASAYPRDIDYKRFREI 205 (452)
T ss_pred Ccccccccccccccccceeee-eeeecccCC--CCCcCHHHHHHHHHHhC-----CCEEEEe--CCCCCCccCHHHHHHH
Confidence 754433211 1100 344556664 47999999999997532 3344443 4569999999999999
Q ss_pred HHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCC
Q 038818 256 AKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDS 335 (486)
Q Consensus 256 ~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~ 335 (486)
|+++|+++|||+||+.+.+..+.... .+.++|.+++++|||+++|.| |+++++++.. ..........++.
T Consensus 206 ~~~~ga~l~vDaaq~~G~i~~~~~~~---~~~~~D~l~~S~hK~l~GP~G-g~l~~~~~~~-~~l~~~~~~~~~p----- 275 (452)
T PTZ00094 206 CDSVGAYLMADIAHTSGLVAAGVLPS---PFPYADVVTTTTHKSLRGPRS-GLIFYRKKVK-PDIENKINEAVFP----- 275 (452)
T ss_pred HHHcCCEEEEeccchhccccCCCCCC---CCCCCcEEEcCCccCCCCCCc-eEEEEecccc-hHHHHhhccccCC-----
Confidence 99999999999999988775432221 123799999999999999997 7777765421 1100000001110
Q ss_pred CCccCCCCccccCCCC-CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC-CeeEEEEEeecCCC
Q 038818 336 KQVVDYKDWQITLSRR-FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR-NFAVVCFRVLPSAS 413 (486)
Q Consensus 336 ~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~~~v~f~~~~~~~ 413 (486)
.++++-. ....++..+++.+...+++++.++..+++++|.+.|.+. ++++..+. ...++.+.+....
T Consensus 276 ---------~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~-g~~v~~~~~~~~~~~v~~~~~~- 344 (452)
T PTZ00094 276 ---------GLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR-GYDLVTGGTDNHLVLVDLRPFG- 344 (452)
T ss_pred ---------CCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCCCceEeecCCcCC-
Confidence 0111111 133455666776655677888899999999999999886 88887532 1233333332211
Q ss_pred CCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeEC-----CEeEEEEEecCCCCc----HHHHHHHHHHHHHHHHH
Q 038818 414 GLGDGKANEGANELNRKLLESINASGQLYVSHGMVA-----GIYFIRFAVGATLTE----DRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 414 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-----~~~~lR~~~~~~~tt----~~did~~i~~l~~~~~~ 481 (486)
...+.+...|.+.|+.+-..+... ..+.+|+++. ..|+ ++||+++++.|.++++.
T Consensus 345 ------------~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~-~~tt~g~~~~di~~l~~~l~~~~~~ 408 (452)
T PTZ00094 345 ------------ITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTP-ALTTRGAKEKDFKFVADFLDRAVKL 408 (452)
T ss_pred ------------CCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCH-HHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 012345555655677432211111 2368999984 4555 89999999999998863
No 55
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.92 E-value=2.6e-23 Score=225.57 Aligned_cols=366 Identities=12% Similarity=0.005 Sum_probs=228.7
Q ss_pred CcceecCCCCCHHHHHHHHHHhhc-----CCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHH
Q 038818 75 YYFAYFPSSGSIAGFLGEMLSSGF-----NVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEA 149 (486)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a 149 (486)
.||++-.+++..+..+.+++..++ |+. ..+..+..+.++-.++++.+++++|.++.. -.++||+|+|+|
T Consensus 36 iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~-s~~~~s~~~~~~~e~aR~~ia~~lga~~~~-----~~VvFtsnaT~a 109 (805)
T PLN02724 36 VYLDHAGATLYSESQLEAALADFSSNVYGNPH-SQSDSSMRSSDTIESARQQVLEYFNAPPSD-----YACVFTSGATAA 109 (805)
T ss_pred EeEeCCCCCCCCHHHHHHHHHHHHhhccCCCC-cCcchhhhHHHHHHHHHHHHHHHhCCCccc-----eEEEEeCChHHH
Confidence 588887766656666666554432 333 233345556677778999999999996541 047999999999
Q ss_pred HHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHH---HHHcCCCCCCeEEEecCCC------CCcccCH--HHHH
Q 038818 150 ILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKA---AQIAGIDPKNFRAIKTTKS------SSFTLTP--ESLQ 218 (486)
Q Consensus 150 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a---~~~~G~g~~~v~~v~~d~~------~~~~~d~--~~L~ 218 (486)
+..+..... . .++..|+++...|.|+... ++..|+ +++.+|++.. +.+.+++ ++|+
T Consensus 110 lnlva~~l~-~---------~~gd~Iv~t~~eH~svl~~~~~a~~~G~---~v~~v~~~~~~~~~~~~~g~~~~~~~~l~ 176 (805)
T PLN02724 110 LKLVGETFP-W---------SSESHFCYTLENHNSVLGIREYALEKGA---AAIAVDIEEAANQPTNSQGSVVVKSRGLQ 176 (805)
T ss_pred HHHHHHHCC-C---------CCCCeEEEeeccccchHHHHHHHHHcCC---eEEeccchhccccccccccccccchhhhh
Confidence 765533321 1 0456788888999885533 344588 8999988621 1234443 6677
Q ss_pred HHHHHHHH----CCCccEEEEeecCCccccccCCchHHHHHHHHh--------CceEEeeccccchhccCccchhhhcCC
Q 038818 219 AAIDLDIQ----AGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY--------SIWVHVDAAYAGSACICPEFRHFIDGI 286 (486)
Q Consensus 219 ~~l~~~~~----~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~--------g~~lhvD~a~g~~~~~~~~~~~~~~~~ 286 (486)
+.+++... .+..+.+|++++.+|.+|.+.|++.|..+++.. +++++||||++.+....+- .. +
T Consensus 177 ~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv-~~----~ 251 (805)
T PLN02724 177 RRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDL-SR----Y 251 (805)
T ss_pred hhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCCh-hh----c
Confidence 66431110 112335899999999999999999876665542 3579999999887766542 21 1
Q ss_pred CCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCC---CC-C---ccCCCCccccCCCC-C-CchHH
Q 038818 287 EGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASD---SK-Q---VVDYKDWQITLSRR-F-RALKL 357 (486)
Q Consensus 287 ~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~---~~-~---~~~~~~~~~~~sr~-~-~~l~~ 357 (486)
++|++++++|||+++|.|+|++++|++.. . ...|.+..+.... .. . ........++.|.. + ..+++
T Consensus 252 -~~Dfl~~S~HK~~GgP~G~G~L~vr~~~~-~---~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l 326 (805)
T PLN02724 252 -PADFVVVSFYKIFGYPTGLGALLVRRDAA-K---LLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAAL 326 (805)
T ss_pred -CCCEEEEecceeccCCCCceEEEEehhhh-h---hhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHH
Confidence 79999999999999999999999997532 2 1223333321100 00 0 00000112233222 2 23566
Q ss_pred HHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC------CeEEecCC--------CeeEEEEEeecCCCCCCCCCCccc
Q 038818 358 WLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDN------RFEIVAPR--------NFAVVCFRVLPSASGLGDGKANEG 423 (486)
Q Consensus 358 ~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~------~~~~~~~~--------~~~~v~f~~~~~~~~~~~~~~~~~ 423 (486)
..++..+-.-|++++.++..++++++.+.|++++ +++++++. ..++|+|.+..... ..
T Consensus 327 ~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~--------~~ 398 (805)
T PLN02724 327 RHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADG--------SW 398 (805)
T ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCC--------CE
Confidence 6677766555788888999999999999999886 57887542 46899999876421 11
Q ss_pred h-HHHHHHHHHH---HHhcCcEEEeeee---------------------------ECC--EeEEEEEecCCCCcHHHHHH
Q 038818 424 A-NELNRKLLES---INASGQLYVSHGM---------------------------VAG--IYFIRFAVGATLTEDRHVIA 470 (486)
Q Consensus 424 ~-~~~~~~l~~~---l~~~g~~~~~~~~---------------------------~~~--~~~lR~~~~~~~tt~~did~ 470 (486)
. .....++... ..+.|..|-.+.. ..+ .+++|+|+. +++|++|||+
T Consensus 399 v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g-~ynt~eDvd~ 477 (805)
T PLN02724 399 VGHREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFG-YMSTFEDCQK 477 (805)
T ss_pred eCHHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcC-ccCCHHHHHH
Confidence 1 1111122111 1122222111100 011 378999995 7888889999
Q ss_pred HHHHHHHH
Q 038818 471 AWKVVQEK 478 (486)
Q Consensus 471 ~i~~l~~~ 478 (486)
+++.|++.
T Consensus 478 lv~~l~~~ 485 (805)
T PLN02724 478 FIDFIISS 485 (805)
T ss_pred HHHHHHHH
Confidence 99999985
No 56
>PRK07179 hypothetical protein; Provisional
Probab=99.92 E-value=1.3e-22 Score=205.68 Aligned_cols=330 Identities=13% Similarity=0.099 Sum_probs=211.0
Q ss_pred CCCCCcceecCCCCCHHHHHHHHHHhhcCCC--ccccc-cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCch
Q 038818 71 WQSPYYFAYFPSSGSIAGFLGEMLSSGFNVV--GFNWM-SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTC 147 (486)
Q Consensus 71 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~--~~~~~-~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt 147 (486)
+.+-.|+|+.. .+.....+.+.+..+.+.. ...+. ..+...++| +.+++++|.+ ..++++||+
T Consensus 59 ~~~~~YL~l~~-~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le----~~la~~~g~~---------~~~~~~sG~ 124 (407)
T PRK07179 59 LQSNDYLNLSG-HPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFE----KKLAAFTGFE---------SCLLCQSGW 124 (407)
T ss_pred eecCCccCCCC-CHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHH----HHHHHHhCCC---------cEEEECCHH
Confidence 34556777652 2333344444444332221 11111 123334444 5678888875 358899999
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHC
Q 038818 148 EAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQA 227 (486)
Q Consensus 148 ~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~ 227 (486)
+||..++.+... ++..|+++...|.++...++..|. +++.++ ..|+++|+++|++..
T Consensus 125 ~An~~~l~~l~~-----------~g~~v~~~~~~h~s~~~~~~~~g~---~~~~~~-------~~d~~~l~~~l~~~~-- 181 (407)
T PRK07179 125 AANVGLLQTIAD-----------PNTPVYIDFFAHMSLWEGVRAAGA---QAHPFR-------HNDVDHLRRQIERHG-- 181 (407)
T ss_pred HHHHHHHHHhCC-----------CCCEEEEECCcCHHHHHHHHHCCC---eEEEec-------CCCHHHHHHHHHhcC--
Confidence 999888776543 456788899999999988888887 665443 359999999987531
Q ss_pred CCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhc--CC-CCCCceeeccccccCCCC
Q 038818 228 GLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFID--GI-EGADSFSLNAHKWFFTTL 304 (486)
Q Consensus 228 g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~--~~-~~aDsi~~~~hK~l~~p~ 304 (486)
+.+|++..+++++|.+.|+++|.++|++||+++|+|++|+.+... +..+..+. ++ ..+|.++.++||+++.+
T Consensus 182 ---~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g-~~g~g~~~~~~~~~~vdi~~~S~sK~~g~~- 256 (407)
T PRK07179 182 ---PGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHG-PQGAGLVAELGLTSRVHFITASLAKAFAGR- 256 (407)
T ss_pred ---CeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcC-CCCCchHHhcCCCCCCCEEEeechHhhhcc-
Confidence 457888889999999999999999999999999999999754321 11111111 22 35799999999999753
Q ss_pred cceEEEeeCchHHHHHhc-CCcccccCccCCCCCccCCCCccccCCCC-CCchHHHHHHHHhchHHHHHHHHHHHHHHHH
Q 038818 305 DCCCLWVKNPNALIKALS-TNPEFLRNKASDSKQVVDYKDWQITLSRR-FRALKLWLVLRSFGVANLRNFLRSHVRMAQL 382 (486)
Q Consensus 305 ~~g~~~~~~~~~~~~~~~-~~~~y~~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~ 382 (486)
+|+++.+++ ... .+. ...++... ++-. ....++..+++.+ +...+..++..+++++
T Consensus 257 -~G~l~~~~~-~~~-~~~~~~~~~~~~-----------------~t~~~~~~aa~~aal~~~--~~~~~~~~~l~~~~~~ 314 (407)
T PRK07179 257 -AGIITCPRE-LAE-YVPFVSYPAIFS-----------------STLLPHEIAGLEATLEVI--ESADDRRARLHANARF 314 (407)
T ss_pred -CeEEEeCHH-HHH-HHHHhCcCeeeC-----------------CCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHH
Confidence 788877643 222 221 11111111 1101 1112233334433 2234567888999999
Q ss_pred HHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEE---EeeeeECCEeEEEEEec
Q 038818 383 FQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLY---VSHGMVAGIYFIRFAVG 459 (486)
Q Consensus 383 l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~~~~~~~~~~lR~~~~ 459 (486)
|++.|+++ ++++.. ..+++.+.+.. ......+.+.|.++|+.. ..+....+..++|++++
T Consensus 315 l~~~L~~~-g~~v~~--~~~i~~l~~~~--------------~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~ 377 (407)
T PRK07179 315 LREGLSEL-GYNIRS--ESQIIALETGS--------------ERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLN 377 (407)
T ss_pred HHHHHHHc-CCCCCC--CCCEEEEEeCC--------------HHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEEC
Confidence 99999987 777652 34677776532 112346677777888741 22222234578999995
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHH
Q 038818 460 ATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 460 ~~~tt~~did~~i~~l~~~~~~l 482 (486)
..+|++||++++++|+++.++.
T Consensus 378 -~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 378 -ADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred -CCCCHHHHHHHHHHHHHHHHhh
Confidence 5778889999999999987653
No 57
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.92 E-value=2e-22 Score=196.72 Aligned_cols=337 Identities=14% Similarity=0.117 Sum_probs=233.0
Q ss_pred CcCCCCCCcceecCCCCCHHHHHHHHHHhh-cCCCc--cccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcC
Q 038818 68 ITHWQSPYYFAYFPSSGSIAGFLGEMLSSG-FNVVG--FNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQG 144 (486)
Q Consensus 68 ~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~-~n~~~--~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ 144 (486)
..+|.+-.|+|.-..+. ....+.+.+..+ ....+ ......+...+| .+.+++++|.+. .++.+
T Consensus 41 ~~nf~SNdYLGLa~~~~-~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~L----E~~lA~f~g~e~---------al~f~ 106 (388)
T COG0156 41 VLNFCSNDYLGLASHPE-LIEAAKAAIRRYGVGAGGSRLISGTSDLHVEL----EEELADFLGAEA---------ALLFS 106 (388)
T ss_pred eEeeeccCcccccCCHH-HHHHHHHHHHHhCCCCCCcCcccCCcHHHHHH----HHHHHHHhCCCc---------EEEEc
Confidence 45667778999854422 223333333332 11111 112223333444 456888888874 47777
Q ss_pred CchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHH
Q 038818 145 TTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLD 224 (486)
Q Consensus 145 ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~ 224 (486)
+|-.||+..+.+... ++++|+..+..|.|+..+++..+. +++.++. .|+++||++|++.
T Consensus 107 SGy~AN~~~i~~l~~-----------~~dli~~D~lnHASiidG~rls~a---~~~~f~H-------nD~~~Le~~l~~~ 165 (388)
T COG0156 107 SGFVANLGLLSALLK-----------KGDLIFSDELNHASIIDGIRLSRA---EVRRFKH-------NDLDHLEALLEEA 165 (388)
T ss_pred ccchhHHHHHHHhcC-----------CCcEEEEechhhhhHHHHHHhCCC---cEEEecC-------CCHHHHHHHHHhh
Confidence 789999777666544 688999999999999999999999 8888864 5899999999986
Q ss_pred HHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhc--CCC--CCCceeecccccc
Q 038818 225 IQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFID--GIE--GADSFSLNAHKWF 300 (486)
Q Consensus 225 ~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~--~~~--~aDsi~~~~hK~l 300 (486)
...+..+.+|+.....++.|.+.||++|+++|++||+|+.||.||+.+.+. +..+.... |+. .+|.++.+..|.+
T Consensus 166 ~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G-~~GrG~~e~~g~~~~~vdi~~gTlsKAl 244 (388)
T COG0156 166 RENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLG-PNGRGLAEHFGLEPEEVDIIVGTLGKAL 244 (388)
T ss_pred hccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccC-CCCccHHHHhCCCCccceEEEEEchhhh
Confidence 543325678999999999999999999999999999999999999876653 23333221 333 4589999999999
Q ss_pred CCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHH
Q 038818 301 FTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMA 380 (486)
Q Consensus 301 ~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a 380 (486)
+. .|.++.-+............+|++.... .+..+.++..+++.+ +...++.++..+++
T Consensus 245 Gs---~Gg~v~g~~~~~d~L~~~ar~~ifStal----------------pP~~aaa~~~al~~l--~~~~~~r~~L~~~~ 303 (388)
T COG0156 245 GS---SGGYIAGSAALIDYLRNRARPFIFSTAL----------------PPAVAAAALAALRIL--EEGPERRERLQELA 303 (388)
T ss_pred cc---cCceeeCcHHHHHHHHHhCCceeccCCC----------------CHHHHHHHHHHHHHH--HhCHHHHHHHHHHH
Confidence 83 4566666655443333445677765321 012233444455544 34456778888999
Q ss_pred HHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcE---EEeeeeECCEeEEEEE
Q 038818 381 QLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQL---YVSHGMVAGIYFIRFA 457 (486)
Q Consensus 381 ~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~---~~~~~~~~~~~~lR~~ 457 (486)
.++++.+... ++.+ .+..++++.+.+.+ +....++.+.+.++|+. +..|++..+...||++
T Consensus 304 ~~~~~~~~~~-~~~~-~~s~s~I~pv~~gd--------------~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~ 367 (388)
T COG0156 304 AFFRSLLKAL-GLVL-LPSESPIIPVILGD--------------EERALEASRALLEEGIYVSAIRPPTVPKGTARLRIT 367 (388)
T ss_pred HHHHHHHHhc-CCcc-CCCCCCeeeeEeCC--------------HHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEE
Confidence 9999777664 5655 35567888887765 34456777778777874 3456667788999999
Q ss_pred ecCCCCcHHHHHHHHHHHHHH
Q 038818 458 VGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 458 ~~~~~tt~~did~~i~~l~~~ 478 (486)
++ ...|++||+++++++.++
T Consensus 368 lt-a~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 368 LT-AAHTEEDIDRLAEALSEV 387 (388)
T ss_pred ec-CCCCHHHHHHHHHHHHhh
Confidence 96 456777999999999875
No 58
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.91 E-value=7.7e-23 Score=204.55 Aligned_cols=342 Identities=11% Similarity=-0.029 Sum_probs=215.4
Q ss_pred eecCCCCCHHHH-HHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEc-CCchHHHHHHHH
Q 038818 78 AYFPSSGSIAGF-LGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQ-GTTCEAILCTLA 155 (486)
Q Consensus 78 ~~~~~~~~~~~~-~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t-~ggt~a~~~al~ 155 (486)
-|.+++...+.. +.+.+...+- .....++.+.++.+++++.+++++|.++.. ..+++ ++||+++..++.
T Consensus 15 ~f~~Gp~~~~~~~v~~a~~~~~~---~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~------~v~~~~gs~T~~~~~~~~ 85 (378)
T PRK03080 15 RFSSGPCKKRPGWQLEALADALL---GRSHRQKPVKALLKRVIEGTRELLSLPEGY------EVGIVPGSDTGAWEMALW 85 (378)
T ss_pred CcCCCCcCCChHHHHHHHHhhhc---ccCcCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEECCchHHHHHHHHH
Confidence 355555554433 5555543321 111234567888889999999999996542 56666 588888765554
Q ss_pred HHHHHHHHHccccCCCCeEEEecCCCchHHHH--HHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEE
Q 038818 156 AARDQILNEIGRENISRLVVYGSDQTHSALQK--AAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLF 233 (486)
Q Consensus 156 ~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~--a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~ 233 (486)
.... . ++..+++ ...|.+-.. +++.+|+. +++.++.+. ....|+++++. + ..
T Consensus 86 ~l~~----~------~~~~vi~-~g~f~~~~~~~~~~~~g~~--~v~~~~~~~--g~~~d~~~i~~-----~------~~ 139 (378)
T PRK03080 86 SLLG----A------RRVDHLA-WESFGSKWATDVVKQLKLE--DPRVLEADY--GSLPDLSAVDF-----D------RD 139 (378)
T ss_pred hcCC----C------CcceEEE-eCHHHHHHHHHHHhhcCCC--CceEeccCC--CCCCCHhhcCC-----C------CC
Confidence 4311 0 2444444 356666333 33555641 567777764 24778776432 1 24
Q ss_pred EEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeC
Q 038818 234 LCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKN 313 (486)
Q Consensus 234 vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~ 313 (486)
|.+++.+|.+|.+.|+++|++ +++|++++||++++.+....+- ..+|++.+++|||+++|.|+|++++++
T Consensus 140 V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv--------~~iD~~~~s~~K~l~~P~G~g~l~v~~ 209 (378)
T PRK03080 140 VVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDW--------SKLDVYTFSWQKVLGGEGGHGMAILSP 209 (378)
T ss_pred EEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCCCCH--------HHCcEEEEehhhhCCCCCceEEEEECH
Confidence 889999999999999999999 8899999999999887765542 247999999999999999999999997
Q ss_pred chHHHHHhcCC-----cccccCccCCCCCccCCCCccccCCCC--CCc---hHHHHHHHHhchH-HHHHHHHHHHHHHHH
Q 038818 314 PNALIKALSTN-----PEFLRNKASDSKQVVDYKDWQITLSRR--FRA---LKLWLVLRSFGVA-NLRNFLRSHVRMAQL 382 (486)
Q Consensus 314 ~~~~~~~~~~~-----~~y~~~~~~~~~~~~~~~~~~~~~sr~--~~~---l~~~~~l~~~g~~-g~~~~~~~~~~~a~~ 382 (486)
+.. .+.-... +.|+.... .........+.+.. ... .++..+++.+-.. |++++.++..+++++
T Consensus 210 ~~~-~~~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~ 283 (378)
T PRK03080 210 RAV-ERLESYTPARPIPKFFRLTK-----GGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASV 283 (378)
T ss_pred HHH-HhhhcccCCCCCchhheecc-----chHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 643 2211111 11110000 00000001111111 111 2335577777666 899999999999999
Q ss_pred HHHHHhCCCCeEEecC-C--Ce-eEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEe
Q 038818 383 FQELVGGDNRFEIVAP-R--NF-AVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAV 458 (486)
Q Consensus 383 l~~~L~~~~~~~~~~~-~--~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~ 458 (486)
+++.|+++++++++.+ + .. .+++|++.+.. .....++..++.++|++...+..-...+.+|+++
T Consensus 284 l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~------------~~~~~~~~~~l~~~~i~v~~g~~~~~~~~vRis~ 351 (378)
T PRK03080 284 LYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQ------------AAVDAAAVAKLLRENGAVDIEPYRDAPNGLRIWC 351 (378)
T ss_pred HHHHHHhCCCcccccCCccccCccEEEEEcCCch------------HHHHHHHHHHHHHcCCeeccccccCCCCcEEEec
Confidence 9999999977777642 2 23 47788765310 0122334555656665432221111246799998
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 459 GATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 459 ~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
+ .+++++||++++++|+++++++-
T Consensus 352 ~-~~~t~~di~~l~~al~~~~~~~~ 375 (378)
T PRK03080 352 G-PTVEPADVEALTPWLDWAFERLK 375 (378)
T ss_pred C-CCCCHHHHHHHHHHHHHHHHHHh
Confidence 5 68888999999999999887653
No 59
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.91 E-value=7.1e-22 Score=199.58 Aligned_cols=301 Identities=12% Similarity=0.086 Sum_probs=199.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
..+..++.+.+++++|.+ .+++++||++||..++.+... +++.|+++...|.++..+++.
T Consensus 82 ~~~~~~le~~ia~~~g~~---------~~ii~~~~~~a~~~~~~~l~~-----------~gd~vi~~~~~~~s~~~~~~~ 141 (393)
T TIGR01822 82 QDIHKELEAKIAAFLGTE---------DTILYASCFDANGGLFETLLG-----------AEDAIISDALNHASIIDGVRL 141 (393)
T ss_pred hHHHHHHHHHHHHHhCCC---------cEEEECchHHHHHHHHHHhCC-----------CCCEEEEeccccHHHHHHHHh
Confidence 344456667888998874 357778889998765544322 677899999999999999888
Q ss_pred cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccc
Q 038818 192 AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAG 271 (486)
Q Consensus 192 ~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~ 271 (486)
.+. ..+.++ .+|+++|+++|++..+.+..+.+|+..+..+++|.+.|+++|+++|++||+++++|++|+.
T Consensus 142 ~~~---~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~ 211 (393)
T TIGR01822 142 CKA---KRYRYA-------NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHAT 211 (393)
T ss_pred cCC---ceEEeC-------CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccc
Confidence 877 554432 4799999999987543333456788888889999999999999999999999999999964
Q ss_pred hhccCccchh--hhcCC-CCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccC
Q 038818 272 SACICPEFRH--FIDGI-EGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITL 348 (486)
Q Consensus 272 ~~~~~~~~~~--~~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 348 (486)
+.... .... ...++ ..+|.++.++||+++++ ..|+++.+ +...........+|.. .+
T Consensus 212 g~~~~-~~~~~~~~~~~~~~~di~~~s~sK~l~g~-r~G~~~~~-~~~~~~l~~~~~~~~~-----------------~~ 271 (393)
T TIGR01822 212 GFLGP-TGRGSHELCGVMGRVDIITGTLGKALGGA-SGGFTTAR-KEVVELLRQRSRPYLF-----------------SN 271 (393)
T ss_pred cCcCC-CCCchHHhcCCCCCCeEEEEEChHHhhCC-CcEEEEeC-HHHHHHHHHhCcccee-----------------cC
Confidence 44321 1111 01122 25889999999998765 45776654 3333222111111211 11
Q ss_pred CCCCC-chHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHH
Q 038818 349 SRRFR-ALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANEL 427 (486)
Q Consensus 349 sr~~~-~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~ 427 (486)
+.... ..++..++..+ +..+++.++..++++++.+.|++. ++++. ++..+++.+.+.+ ...
T Consensus 272 ~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~i~~~~--------------~~~ 333 (393)
T TIGR01822 272 SLPPAVVGASIKVLEML--EASNELRDRLWANTRYFRERMEAA-GFDIK-PADHPIIPVMLYD--------------AVL 333 (393)
T ss_pred CCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeCC--------------HHH
Confidence 11111 11223333332 334567788899999999999876 77764 3344566655432 122
Q ss_pred HHHHHHHHHhcCcEEEeeeeE----CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 428 NRKLLESINASGQLYVSHGMV----AGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 428 ~~~l~~~l~~~g~~~~~~~~~----~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
..++.+.|.++|+.+ .+..+ .+...+|++++ ..++++||+++++.|+++.+++
T Consensus 334 ~~~l~~~L~~~gI~v-~~~~~~~~~~~~~~iRis~~-~~~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 334 AQRFARRLLEEGIYV-TGFFYPVVPKGQARIRVQIS-AAHTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred HHHHHHHHHHCCeeE-eeeCCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 456777888888643 33221 23457999984 6778889999999999987654
No 60
>PLN02721 threonine aldolase
Probab=99.91 E-value=2e-22 Score=200.60 Aligned_cols=306 Identities=18% Similarity=0.147 Sum_probs=192.7
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ 186 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 186 (486)
.+|...++|+ .+++++|.+ .++++++||++++.++.+.... +++.|++++.+|+++.
T Consensus 38 ~~~~~~~l~~----~la~~~~~~---------~~~~~~~Gs~a~~~~l~~~~~~----------~gd~Vl~~~~~~~~~~ 94 (353)
T PLN02721 38 YDPTALRLEE----EMAKIFGKE---------AALFVPSGTMGNLISVLVHCDV----------RGSEVILGDNSHIHLY 94 (353)
T ss_pred CCHHHHHHHH----HHHHHhCCc---------eeEEecCccHHHHHHHHHHccC----------CCCeEEEcCccceehh
Confidence 3455455554 567777754 3578888899988776665431 4667888999999877
Q ss_pred H---HHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCC-CccEEEEeec-CCccccccCC---chHHHHHHHH
Q 038818 187 K---AAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAG-LIPLFLCATV-GTTAITTVDP---LGPLCDIAKR 258 (486)
Q Consensus 187 ~---a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g-~~p~~vv~~~-gtt~~G~idp---l~~I~~i~~~ 258 (486)
+ .+...|+ +++.+|.++ ++.+|+++|+++|++....+ ..+.+|+++. .++++|.+-| +++|.++|++
T Consensus 95 ~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~ 169 (353)
T PLN02721 95 ENGGISTLGGV---HPRTVKNNE--DGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKR 169 (353)
T ss_pred cccchhhhcCc---eeEecCCCc--CCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHH
Confidence 6 4677788 999998874 56899999999997432111 1345666655 4566787644 8899999999
Q ss_pred hCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCc
Q 038818 259 YSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQV 338 (486)
Q Consensus 259 ~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~ 338 (486)
+|+++|+|+||..+........ ......++|++++++||++++|. |.+++.+++......... .+..
T Consensus 170 ~g~~livD~a~~~~~~~~~~~~-~~~~~~~~d~~~~s~sK~l~~~~--G~~~~~~~~~~~~~~~~~-~~~~--------- 236 (353)
T PLN02721 170 HGLKLHIDGARIFNASVALGVP-VHRLVKAADSVSVCLSKGLGAPV--GSVIVGSKSFIRKAKRLR-KTLG--------- 236 (353)
T ss_pred cCCEEEEEchhhhcchhhhCCC-HHHHhhhCCEEEEecccccCCce--eeEEecCHHHHHhHHHHH-HhcC---------
Confidence 9999999998743221111111 11112478999999999998774 444445554433211100 0000
Q ss_pred cCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEE-ecCCCeeEEEEEeecCCCCCCC
Q 038818 339 VDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEI-VAPRNFAVVCFRVLPSASGLGD 417 (486)
Q Consensus 339 ~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~-~~~~~~~~v~f~~~~~~~~~~~ 417 (486)
++..........++..+ +...+.+++..++++++.+.|++++++++ +.++..+++.+++....
T Consensus 237 ---------~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~----- 300 (353)
T PLN02721 237 ---------GGMRQVGVLAAAALVAL--QENVPKLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGS----- 300 (353)
T ss_pred ---------CCeehhHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCc-----
Confidence 00000111111122211 22223345556788899999999888866 55666777777765310
Q ss_pred CCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 418 GKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 418 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
......+.++|.++|+.+... +..++|+++ ++.++++|+++++++|++++..
T Consensus 301 -------~~~~~~~~~~L~~~gi~v~~~----~~~~lR~~~-~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 301 -------RITAEKLCKSLEEHGVLLMPG----NSSRIRVVT-HHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred -------cccHHHHHHHHHhCCcEEecC----CCceEEEEe-cCcCCHHHHHHHHHHHHHHhhc
Confidence 011346777787788754332 346899998 4577889999999999987653
No 61
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.91 E-value=1.1e-22 Score=201.33 Aligned_cols=296 Identities=17% Similarity=0.079 Sum_probs=193.5
Q ss_pred HHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH---HHH
Q 038818 114 LENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK---AAQ 190 (486)
Q Consensus 114 le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~---a~~ 190 (486)
...++.+++++++| ++ .+++++|||+++..++.+... +++.|+++..+|+++.+ .+.
T Consensus 33 ~~~~l~~~~a~~~g-~~--------~~~~~~~gt~a~~~~~~~l~~-----------~gd~v~~~~~~~~~~~~~~~~~~ 92 (338)
T cd06502 33 TTAKLEARAAELFG-KE--------AALFVPSGTAANQLALAAHTQ-----------PGGSVICHETAHIYTDEAGAPEF 92 (338)
T ss_pred HHHHHHHHHHHHhC-CC--------eEEEecCchHHHHHHHHHhcC-----------CCCeEEEecCcceeeecCCcHHH
Confidence 34556678899998 33 578999999998877766532 56778889999988654 355
Q ss_pred HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHC-CCccEEEEeecCCcccc--ccCCchHHHHHHHHhCceEEeec
Q 038818 191 IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQA-GLIPLFLCATVGTTAIT--TVDPLGPLCDIAKRYSIWVHVDA 267 (486)
Q Consensus 191 ~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~-g~~p~~vv~~~gtt~~G--~idpl~~I~~i~~~~g~~lhvD~ 267 (486)
..|+ +++.+|.+ ++.+|+++|++++++..+. ...+.+|+++.++++.| ..+++++|+++|+++|+++|+|+
T Consensus 93 ~~g~---~~~~v~~~---~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDe 166 (338)
T cd06502 93 LSGV---KLLPVPGE---NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDG 166 (338)
T ss_pred HcCc---eEEeecCC---CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeech
Confidence 6788 89999875 3589999999999753211 11355788888887633 24678899999999999999999
Q ss_pred cccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCcccc
Q 038818 268 AYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQIT 347 (486)
Q Consensus 268 a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 347 (486)
||..+....... ........+|+++.++||+++.|. |.+++.+++...........+-
T Consensus 167 a~~~~~~~~~~~-~~~~~~~~~d~~~~s~sK~~~~~~--g~~~~~~~~~~~~~~~~~~~~~------------------- 224 (338)
T cd06502 167 ARLANAAAALGV-ALKTYKSGVDSVSFCLSKGGGAPV--GAVVVGNRDFIARARRRRKQAG------------------- 224 (338)
T ss_pred HHHHHHHHhcCC-CHHHHHhcCCEEEEeccccCCCcc--ceEEECCHHHHHHHHHHHHHhC-------------------
Confidence 985332211110 111111368999999999999875 3355445544332211111000
Q ss_pred CCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHH
Q 038818 348 LSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANEL 427 (486)
Q Consensus 348 ~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~ 427 (486)
.+.+..++..++++..+...++.+..++..++++++.+.|+++ ++.+ .++..+++.++.... ...
T Consensus 225 ~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~-~~~~~~~~~v~~~~~-------------~~~ 289 (338)
T cd06502 225 GGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEEL-GGLE-SEVQTNIVLLDPVEA-------------NAV 289 (338)
T ss_pred CChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CCCc-ccccCCeEEEecCCc-------------cHH
Confidence 0001223344455555544567778889999999999999988 4543 356678888876432 223
Q ss_pred HHHHHHHHH---hcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 038818 428 NRKLLESIN---ASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQE 477 (486)
Q Consensus 428 ~~~l~~~l~---~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~ 477 (486)
..++.+.+. ++|+. +.+. . ..++|+++ +..++++|++++++++++
T Consensus 290 ~~~l~~~l~~~~~~gi~-~~~~--~-~~~lRi~~-~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 290 FVELSKEAIERRGEGVL-FYAW--G-EGGVRFVT-HWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHHHHHHHHHhhhCCEE-EEec--C-CCeEEEEe-ecCCCHHHHHHHHHHHhc
Confidence 334444443 56764 3322 2 26899998 467788899999999865
No 62
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.91 E-value=1.3e-22 Score=190.30 Aligned_cols=306 Identities=21% Similarity=0.188 Sum_probs=198.6
Q ss_pred ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCC
Q 038818 102 GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQT 181 (486)
Q Consensus 102 ~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~ 181 (486)
...|..+|....+| +++++++|. . .++|+++||+||..+|.+... +.-.|++...+
T Consensus 28 ~~~YG~D~~~~~~e----~~~ae~~g~-~--------a~~Fv~sGT~aN~lal~~~~~-----------~~~~vi~~~~a 83 (342)
T COG2008 28 DDVYGEDPTTNALE----QRIAELFGK-E--------AALFVPSGTQANQLALAAHCQ-----------PGESVICHETA 83 (342)
T ss_pred CCCCCCCHHHHHHH----HHHHHHhCC-c--------eEEEecCccHHHHHHHHHhcC-----------CCCeEEEeccc
Confidence 45666677666665 567888887 3 579999999999999998774 67788899999
Q ss_pred chHHHHH--HHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHH-HCCCccEEEEeecCCccccccCC---chHHHHH
Q 038818 182 HSALQKA--AQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDI-QAGLIPLFLCATVGTTAITTVDP---LGPLCDI 255 (486)
Q Consensus 182 H~s~~~a--~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~-~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i 255 (486)
|...+.+ ...++ ++..++.++..+|.|++++++..|..+- -....|.++..+..+ ..|.+-| |++|.++
T Consensus 84 Hi~~~E~Ga~~~~~----~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~t-e~GtVy~l~el~~i~~~ 158 (342)
T COG2008 84 HIYTDECGAPEFFG----GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTAT-EGGTVYPLDELEAISAV 158 (342)
T ss_pred cceecccCcHHHHc----CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccC-CCceecCHHHHHHHHHH
Confidence 9887764 34444 2334455544578999999999988621 122346555555544 7798855 6677888
Q ss_pred HHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCC
Q 038818 256 AKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDS 335 (486)
Q Consensus 256 ~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~ 335 (486)
||++|+.||+|||.-+..+..-. ......-.++|++++.+.|.++.| .|.+++-+.+..++.- |.....
T Consensus 159 ~k~~~l~LHmDGAR~~nA~valg-~~~~~~~~~~D~v~~~~tK~g~~~--~gAiv~gn~~~~~~a~-----~~rK~~--- 227 (342)
T COG2008 159 CKEHGLPLHMDGARLANALVALG-VALKTIKSYVDSVSFCLTKGGGAP--VGAIVFGNRDFAKRAR-----RWRKRA--- 227 (342)
T ss_pred HHHhCCceeechHHHHHHHHHcC-CCHHHHHhhCCEEEEecccCCcce--eeeEEEcCHHHHHHHH-----HHHHHh---
Confidence 99999999999986444332211 111111248999999999999988 4555555554433221 111100
Q ss_pred CCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCC
Q 038818 336 KQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGL 415 (486)
Q Consensus 336 ~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~ 415 (486)
+ ++-|..+-+++ ..+-++..+-+....++..++|++|.+.|.+.||+++..++++|+|.+++....
T Consensus 228 G----------gl~~k~r~laA-~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~~~--- 293 (342)
T COG2008 228 G----------GLMRKARFLAA-QGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPESA--- 293 (342)
T ss_pred c----------ccHhhhhHHHH-HHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECChHH---
Confidence 0 01111121111 111222334455666777788999999999889999998889999988876421
Q ss_pred CCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECC-E-eEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 416 GDGKANEGANELNRKLLESINASGQLYVSHGMVAG-I-YFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 416 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-~-~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
.+.+...|..+.. ..+.+ . ..+|++. ++.|+++|||+++..++++.
T Consensus 294 ----------------i~~l~~~~~~~~~-~~~~~~~~~~vRfvt-s~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 294 ----------------IEALRLAGALFYR-GVLIGAHGEIVRFVT-SWATSEEDVDELVAAIKALL 341 (342)
T ss_pred ----------------HHHHHhhchhhee-eeeccCCCceEEEEe-eccCCHHHHHHHHHHHHHhh
Confidence 1223333432211 12222 2 4799986 79999999999999998764
No 63
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.91 E-value=7.8e-22 Score=195.82 Aligned_cols=319 Identities=16% Similarity=0.098 Sum_probs=212.1
Q ss_pred hhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEE
Q 038818 96 SGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVV 175 (486)
Q Consensus 96 ~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v 175 (486)
...+.+...|...+...+++..+.+++...+|.+.. ....++++|||+++..++.+... ++.+|
T Consensus 23 ~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~-----~~~~~~~~~~t~a~~~~~~~~~~-----------~g~~v 86 (350)
T cd00609 23 AALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVP-----PEEIVVTNGAQEALSLLLRALLN-----------PGDEV 86 (350)
T ss_pred HhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC-----cceEEEecCcHHHHHHHHHHhCC-----------CCCEE
Confidence 345555556667777889999999999998875332 13688999999988776666533 56778
Q ss_pred EecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCH--HHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHH
Q 038818 176 YGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTP--ESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLC 253 (486)
Q Consensus 176 ~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~--~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~ 253 (486)
+++...|.++..+++..|. +++.+|+++. +.++. +.+++.+.+ .+.+|+++.+++++|.+.|++++.
T Consensus 87 l~~~~~~~~~~~~~~~~~~---~~~~i~~~~~--~~~~~~~~~~~~~~~~------~~~~v~i~~~~~~tG~~~~~~~l~ 155 (350)
T cd00609 87 LVPDPTYPGYEAAARLAGA---EVVPVPLDEE--GGFLLDLELLEAAKTP------KTKLLYLNNPNNPTGAVLSEEELE 155 (350)
T ss_pred EEcCCCchhHHHHHHHCCC---EEEEEecccc--cCCccCHHHHHhhcCc------cceEEEEECCCCCCCcccCHHHHH
Confidence 8999999999999999999 9999999863 34544 555544332 245788888999999999866555
Q ss_pred ---HHHHHhCceEEeeccccchhccCccchh-hhcCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccc
Q 038818 254 ---DIAKRYSIWVHVDAAYAGSACICPEFRH-FIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFL 328 (486)
Q Consensus 254 ---~i~~~~g~~lhvD~a~g~~~~~~~~~~~-~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~ 328 (486)
++|+++|+++|+|+||+++......... ...+....|.+..++||+++ .+.++|+++++++.... .+.....+.
T Consensus 156 ~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~-~~~~~~~~~ 234 (350)
T cd00609 156 ELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLE-RLKKLLPYT 234 (350)
T ss_pred HHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHH-HHHHHHHhc
Confidence 8999999999999999876543221100 01122357888899999998 55678988887744433 222111110
Q ss_pred cCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEe
Q 038818 329 RNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRV 408 (486)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~ 408 (486)
. ..........+...++... ++++++.++..++++++.+.|++.+...+..++....+.+.+
T Consensus 235 ~-----------------~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~ 296 (350)
T cd00609 235 T-----------------SGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDL 296 (350)
T ss_pred c-----------------cCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEec
Confidence 0 0000112233333444322 678888899999999999999988554433333444555555
Q ss_pred ecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 038818 409 LPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQE 477 (486)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~~ 477 (486)
... ...+.+.+.+.+.|+.......+. +..++|++++.+ ++||++++++|++
T Consensus 297 ~~~--------------~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~---~~~i~~~~~al~~ 350 (350)
T cd00609 297 PEG--------------DDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP---EEELEEALERLAE 350 (350)
T ss_pred CCC--------------ChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC---HHHHHHHHHHhhC
Confidence 431 112344555666687544333332 567999999654 7799999999863
No 64
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.90 E-value=2.7e-21 Score=192.16 Aligned_cols=336 Identities=12% Similarity=0.006 Sum_probs=211.4
Q ss_pred CCCCCcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHH
Q 038818 71 WQSPYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAI 150 (486)
Q Consensus 71 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~ 150 (486)
+++.-|+|.-.. +...+.+.+.+..+.++. ..+...........++++.+++++|.+. .+++++|++++
T Consensus 6 ~~~~~~~~~~~~-~~v~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~~~~~---------~iv~~sg~~a~ 74 (349)
T cd06454 6 FCSNDYLGLANH-PEVIEAAKEALDKYGVGA-GGSRLISGTSDLHEELEEELAEFHGKEA---------ALVFSSGYAAN 74 (349)
T ss_pred cccCCccccCCC-HHHHHHHHHHHHHhCCCC-CCcCeecCCchHHHHHHHHHHHHhCCCC---------EEEeccHHHHH
Confidence 345557776422 333444445554332221 1111111234555667788899998753 46777778888
Q ss_pred HHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCc
Q 038818 151 LCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLI 230 (486)
Q Consensus 151 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~ 230 (486)
..++.+... +++.|+++...|+++..+++..|+ +++.++ .+|++.+++++++.. ....
T Consensus 75 ~~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~~~-------~~~~~~le~~i~~~~-~~~~ 132 (349)
T cd06454 75 DGVLSTLAG-----------KGDLIISDSLNHASIIDGIRLSGA---KKRIFK-------HNDMEDLEKLLREAR-RPYG 132 (349)
T ss_pred HHHHHHhcC-----------CCCEEEEehhhhHHHHHHHHHcCC---ceEEec-------CCCHHHHHHHHHHhh-ccCC
Confidence 877665542 567788899999999999999998 887775 348889999987643 1234
Q ss_pred cEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchh--hhc-CCCCCCceeeccccccCCCCcce
Q 038818 231 PLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRH--FID-GIEGADSFSLNAHKWFFTTLDCC 307 (486)
Q Consensus 231 p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~--~~~-~~~~aDsi~~~~hK~l~~p~~~g 307 (486)
+.+|+++.+++++|.+.|+++|+++|+++|+++++|++|+.+.... .... ... ...+.|+++.++||+++.+ + |
T Consensus 133 ~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-g-G 209 (349)
T cd06454 133 KKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYGP-HGRGVEEFGGLTDDVDIIMGTLGKAFGAV-G-G 209 (349)
T ss_pred CeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccCC-CCCChhhhccccccCcEEEeechhhhccc-C-C
Confidence 5678888899999999999999999999999999999997443321 1010 111 1236889999999999863 2 5
Q ss_pred EEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC-CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH
Q 038818 308 CLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR-FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQEL 386 (486)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~ 386 (486)
+++.+ +..+.........+.. ..+.. ...+++..+++.+-. +.+..++..++++++.+.
T Consensus 210 ~i~~~-~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~ 269 (349)
T cd06454 210 YIAGS-KELIDYLRSYARGFIF-----------------STSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRG 269 (349)
T ss_pred EEECC-HHHHHHHHHhchhhhc-----------------cCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHH
Confidence 55544 4333322211111111 00101 112233344443322 456778888999999999
Q ss_pred HhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeee---ECCEeEEEEEecCCCC
Q 038818 387 VGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGM---VAGIYFIRFAVGATLT 463 (486)
Q Consensus 387 L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~~~~~lR~~~~~~~t 463 (486)
|+++ ++++..++...++++...+ .....++.+.|.++|+.+..... ..+..++|+++. ...
T Consensus 270 l~~~-g~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~-~~~ 333 (349)
T cd06454 270 LKEL-GFPVGGSPSHIIPPLIGDD--------------PAKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLS-AAH 333 (349)
T ss_pred HHhc-CCcccCCCCCcEEEEeCCC--------------hHHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEe-CCC
Confidence 9887 7777655444444443321 12245778888888875433211 112468999984 567
Q ss_pred cHHHHHHHHHHHHHH
Q 038818 464 EDRHVIAAWKVVQEK 478 (486)
Q Consensus 464 t~~did~~i~~l~~~ 478 (486)
+++|+++++++|+++
T Consensus 334 ~~~~i~~~~~~l~~~ 348 (349)
T cd06454 334 TKEDIDRLLEALKEV 348 (349)
T ss_pred CHHHHHHHHHHHHHh
Confidence 888999999999875
No 65
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.90 E-value=1.3e-21 Score=197.38 Aligned_cols=331 Identities=11% Similarity=0.122 Sum_probs=217.3
Q ss_pred HHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcc
Q 038818 87 AGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIG 166 (486)
Q Consensus 87 ~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 166 (486)
+..+.+.+...+......|...++..++++.+.+++.+.+|.+.+ ....++|+|+++++..++.....
T Consensus 48 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-----~~~i~~t~G~~~al~~~~~~l~~------- 115 (391)
T PRK08361 48 PKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVD-----VDNVIVTAGAYEATYLAFESLLE------- 115 (391)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC-----cccEEEeCChHHHHHHHHHHhcC-------
Confidence 344555555555443345655566788999999999888775322 12789999999998777665532
Q ss_pred ccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 167 RENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 167 ~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..|+++..+|.++...+...|+ +++.+|+++++++.+|+++|++.+++.+ .+|+++.++|++|.+
T Consensus 116 ----~g~~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~------~~v~i~~p~NPtG~~ 182 (391)
T PRK08361 116 ----EGDEVIIPDPAFVCYVEDAKIAEA---KPIRIPLREENEFQPDPDELLELITKRT------RMIVINYPNNPTGAT 182 (391)
T ss_pred ----CCCEEEEcCCCCcccHHHHHHcCC---EEEEEecCCccCCCCCHHHHHHhccccc------EEEEEeCCCCCCCcC
Confidence 567788899999999999999999 9999999865567899999999887543 367788899999999
Q ss_pred CC---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhc
Q 038818 247 DP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALS 322 (486)
Q Consensus 247 dp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~ 322 (486)
-| +++|+++|+++++++++|++|+.+.................+.++.+++|.++.| ..+|+++..+ ........
T Consensus 183 ~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~-~~~~~~~~ 261 (391)
T PRK08361 183 LDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPE-QVIKDMIK 261 (391)
T ss_pred cCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccCH-HHHHHHHH
Confidence 88 8899999999999999999997653321111111111113456788999998755 2378888753 33332211
Q ss_pred CCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhc--h--HHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC
Q 038818 323 TNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFG--V--ANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP 398 (486)
Q Consensus 323 ~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g--~--~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 398 (486)
. ..+... ....+...++...+. . +.+++..+...++.+.+.+.|++++++++. +
T Consensus 262 ~-~~~~~~--------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~-~ 319 (391)
T PRK08361 262 L-HAYIIG--------------------NVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVF-E 319 (391)
T ss_pred H-Hhhhcc--------------------CCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeec-C
Confidence 1 111100 011222233333331 1 346677777788889999999988788765 4
Q ss_pred CCeeEEEE-EeecCCCCCCCCCCccchHHHHHHHHHHHHh-cCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHH
Q 038818 399 RNFAVVCF-RVLPSASGLGDGKANEGANELNRKLLESINA-SGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKV 474 (486)
Q Consensus 399 ~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~ 474 (486)
|+.+.+.+ .+.+... + ..++.+.+.+ .|+.+..+..+. +..++|++++. +++++++.++.
T Consensus 320 p~g~~~~~~~l~~~~~-----------~--~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~---~~~~l~~al~~ 383 (391)
T PRK08361 320 PKGAFYVFANIDETGM-----------S--SEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYAT---SKEKLIEAMER 383 (391)
T ss_pred CCEEEEEEEECCCCCC-----------C--HHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecC---CHHHHHHHHHH
Confidence 45555444 4432110 1 2345555544 576544433332 35789999963 46689999988
Q ss_pred HHHHHHH
Q 038818 475 VQEKLDG 481 (486)
Q Consensus 475 l~~~~~~ 481 (486)
|++++++
T Consensus 384 l~~~l~~ 390 (391)
T PRK08361 384 MEKALEE 390 (391)
T ss_pred HHHHHhc
Confidence 8887764
No 66
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.90 E-value=2.7e-21 Score=209.55 Aligned_cols=364 Identities=14% Similarity=0.090 Sum_probs=233.2
Q ss_pred hhHHhhcCCCCCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHH-H------HHHHhhcCCCcccccc
Q 038818 35 PGYLRKRLPESAPYNPEPIETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFL-G------EMLSSGFNVVGFNWMS 107 (486)
Q Consensus 35 p~~~~~~~~~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~------~~l~~~~n~~~~~~~~ 107 (486)
|+.++..-+..||. +.++.+++++++++..+|.. ...|.|.-.-+...|+++ . +++++ +.+++...++
T Consensus 43 P~~i~~~~~l~lp~-~~sE~e~~~~~~~la~~N~~---~~~~ig~G~y~~~~P~vi~~~i~~~~~~~t~-ytPyQ~EisQ 117 (954)
T PRK05367 43 PASIRLAEPLDLPA-ALSEAEALAELRAIASKNKV---FRSYIGQGYYGTHTPPVILRNILENPAWYTA-YTPYQPEISQ 117 (954)
T ss_pred CHHHhcCCCCCCCC-CCCHHHHHHHHHHHHhcCCC---CCcccCCCCCCCcCcHHHHHHHHhCcchhhc-cCCCChHHHH
Confidence 56676666677884 58999999999997766644 234555222222444444 2 33443 2344333334
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH
Q 038818 108 SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK 187 (486)
Q Consensus 108 ~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 187 (486)
|.....+| ...++++|+|++.. +..++.++|.+.. ++.+++... + .++..|++++..|++...
T Consensus 118 G~Leal~~--~Qt~la~LtG~~~a-------naSl~d~aTAa~e-a~~~a~~~~--~-----~~~~~vlv~~~~hP~~~~ 180 (954)
T PRK05367 118 GRLEALLN--FQTMVADLTGLEIA-------NASLLDEATAAAE-AMALAKRVS--K-----SKSNRFFVDDDVHPQTLD 180 (954)
T ss_pred HHHHHHHH--HHHHHHHHHCCChh-------hccccccHHHHHH-HHHHhhhhc--c-----CCCCEEEEcCccCHHHHH
Confidence 44434444 45999999999976 6789999887664 444444321 0 013689999999998554
Q ss_pred H----HHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceE
Q 038818 188 A----AQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWV 263 (486)
Q Consensus 188 a----~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~l 263 (486)
. ++..|+ +|+.+|.+. + ++ .++ ++.++...++.+|.+.|+++|+++||++|+++
T Consensus 181 v~~t~a~~~G~---ev~~~~~~~--d--~~--------~~~-------~~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~ 238 (954)
T PRK05367 181 VLRTRAEPLGI---EVVVGDAAK--A--LD--------HDD-------VFGVLLQYPGTSGEVRDYTALIAAAHARGALV 238 (954)
T ss_pred HHHHHHHhCCC---EEEEecCcc--C--CC--------ccc-------EEEEEEecCCCCeeeccHHHHHHHHHHcCCEE
Confidence 3 566788 999998753 1 11 111 23445555778999999999999999999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCCceeecccccc-----CCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCc
Q 038818 264 HVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWF-----FTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQV 338 (486)
Q Consensus 264 hvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l-----~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~ 338 (486)
+||+.+.+..++.+. .. -++|.++.++|||+ ++| ++|++++|++- .+. .|+.+.+-..+..+.
T Consensus 239 ~vda~~~Al~~l~~p-ge-----~GaDi~vgs~qkfg~P~g~GGP-~aGflavr~~~--~r~---lpgrivG~s~d~~g~ 306 (954)
T PRK05367 239 AVAADLLALTLLTPP-GE-----MGADIAVGSAQRFGVPMGFGGP-HAAYFAVRDAY--KRS---MPGRIVGVSVDAAGN 306 (954)
T ss_pred EEEehhhhccCCCCh-hh-----cCCCEEEeeCcccCCCCCCCCC-CEEEEEECHHH--Hhh---CCCCeeeeecccCCC
Confidence 999976443333321 11 28999999999994 444 49999999752 222 233322211111111
Q ss_pred cCCC--CccccC-CCCCCc------------hHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeE
Q 038818 339 VDYK--DWQITL-SRRFRA------------LKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAV 403 (486)
Q Consensus 339 ~~~~--~~~~~~-sr~~~~------------l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~ 403 (486)
..+. ..+-+. -|+..+ +..++++.++|.+|++++.++...+++++++.|++ +++++..++.+.+
T Consensus 307 ~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~-~G~~~~~~~~f~~ 385 (954)
T PRK05367 307 PALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRA-LGLEVVHDSFFDT 385 (954)
T ss_pred cccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh-cCcccCCCCCCCe
Confidence 1110 001111 122111 22233446689999999999999999999999987 5899887777788
Q ss_pred EEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 404 VCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 404 v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
+.|++... ..++.+++.++|+.. .. .....+|+|+ +..+|++|||+++++|.
T Consensus 386 ~~~~~~~~----------------~~~i~~~l~~~gi~~-~~---~~~~~l~is~-~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 386 LTVEVGGD----------------AAAVLARALAAGINL-RR---VDDDHVGISL-DETTTREDLAALLAVFG 437 (954)
T ss_pred EEEeCCCC----------------HHHHHHHHHHCCcee-cc---ccCCEEEEEe-cccCCHHHHHHHHHHHc
Confidence 88875311 346677777888743 11 1234699999 57889999999999996
No 67
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.90 E-value=2.2e-21 Score=193.42 Aligned_cols=337 Identities=13% Similarity=0.127 Sum_probs=234.1
Q ss_pred CHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHH
Q 038818 85 SIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNE 164 (486)
Q Consensus 85 ~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~ 164 (486)
..|..+.+.+...++.....|....+..++.+.+.+++.+.+|++... ..++++|+|+++|++.++.+..+
T Consensus 41 ~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~----~~eiivt~Ga~~al~~~~~a~~~----- 111 (393)
T COG0436 41 PTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDP----EEEIIVTAGAKEALFLAFLALLN----- 111 (393)
T ss_pred CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCeEEEeCCHHHHHHHHHHHhcC-----
Confidence 455556666665554432255577778999999999999999854321 12599999999999999888776
Q ss_pred ccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCC-CCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccc
Q 038818 165 IGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKS-SSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAI 243 (486)
Q Consensus 165 ~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~-~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~ 243 (486)
+++.|+++++.+.+......++|. +++.+|++.. .+|.+|++.|++++.++++ +|+++.|+|||
T Consensus 112 ------pGDeVlip~P~Y~~y~~~~~~~gg---~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk------~i~ln~P~NPT 176 (393)
T COG0436 112 ------PGDEVLIPDPGYPSYEAAVKLAGG---KPVPVPLDEEENGFKPDLEDLEAAITPKTK------AIILNSPNNPT 176 (393)
T ss_pred ------CCCEEEEeCCCCcCHHHHHHhcCC---EEEEEeCCcCccCCcCCHHHHHhhcCccce------EEEEeCCCCCc
Confidence 778899999999999999999999 9999998653 3799999999999998654 89999999999
Q ss_pred cccC---CchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCC-ceee-ccccccC-CCCcceEEEeeCchHH
Q 038818 244 TTVD---PLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGAD-SFSL-NAHKWFF-TTLDCCCLWVKNPNAL 317 (486)
Q Consensus 244 G~id---pl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aD-si~~-~~hK~l~-~p~~~g~~~~~~~~~~ 317 (486)
|++- .+++|+++|++||+|++.|.+|.....-...+...+.--...| .|++ +..|.++ +..-+|+++..++...
T Consensus 177 Gav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~ 256 (393)
T COG0436 177 GAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEELI 256 (393)
T ss_pred CcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChHHHH
Confidence 9994 4889999999999999999999775442211222221111112 5555 5799998 4457888888755443
Q ss_pred HHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhc----hHHHHHHHHHHHHHHHHHHHHHhCCCCe
Q 038818 318 IKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFG----VANLRNFLRSHVRMAQLFQELVGGDNRF 393 (486)
Q Consensus 318 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g----~~g~~~~~~~~~~~a~~l~~~L~~~~~~ 393 (486)
.... .-..++. .|. ..+...++...+. .+..+++.+...++++.+.+.|.+++++
T Consensus 257 ~~~~-~~~~~~~-----------------~~~---~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~ 315 (393)
T COG0436 257 AALR-KLKSYLT-----------------SCA---PTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGL 315 (393)
T ss_pred HHHH-HHHHhcc-----------------cCC---CHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 3221 1011111 111 2233344444442 2356666778889999999999999889
Q ss_pred EEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhc-CcEEEeeeeEC---CEeEEEEEecCCCCcHHHHH
Q 038818 394 EIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINAS-GQLYVSHGMVA---GIYFIRFAVGATLTEDRHVI 469 (486)
Q Consensus 394 ~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~---~~~~lR~~~~~~~tt~~did 469 (486)
++..+|......|--.+.. .+ ..++.++|.++ |++.+++..+. |.+++|+++.. ++++++
T Consensus 316 ~~~~~p~Ga~Y~~~~i~~~---------~d----~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~---~~~~l~ 379 (393)
T COG0436 316 SVVKPPEGAFYLFPKIPEL---------LD----SEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLAT---SEETLE 379 (393)
T ss_pred eeccCCCeeEEEEeecCCC---------CC----HHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEec---CHHHHH
Confidence 9987677777666443321 01 23455555544 55544444443 45799999954 336899
Q ss_pred HHHHHHHHHHHHH
Q 038818 470 AAWKVVQEKLDGI 482 (486)
Q Consensus 470 ~~i~~l~~~~~~l 482 (486)
+.++.|.+..+..
T Consensus 380 ~a~~rl~~~~~~~ 392 (393)
T COG0436 380 EALRRLARFLAEY 392 (393)
T ss_pred HHHHHHHHHHHhc
Confidence 9999888877643
No 68
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.90 E-value=8.4e-22 Score=196.87 Aligned_cols=326 Identities=13% Similarity=0.053 Sum_probs=209.2
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHH-----HHHcc-----------c-
Q 038818 105 WMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQI-----LNEIG-----------R- 167 (486)
Q Consensus 105 ~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~-----~~~~~-----------~- 167 (486)
|.......++|..+.+...++||.+.. -+=.-+|+.||+.++.+..... +.+.| +
T Consensus 87 y~g~~~~d~ie~l~~~ra~~lf~a~~a--------nvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~ 158 (493)
T PRK13580 87 YAGCQNVDTVEWEAAEHAKELFGAEHA--------YVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWE 158 (493)
T ss_pred cCCCchHHHHHHHHHHHHHHHhCCCcc--------cccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhh
Confidence 344556789999999999999998753 2445677899988777765421 00001 0
Q ss_pred ---cCCCCeEEEec---CCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCc
Q 038818 168 ---ENISRLVVYGS---DQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTT 241 (486)
Q Consensus 168 ---~~~~~~~v~~s---~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt 241 (486)
....++.|+.- .-.|.+........|... .++..++++ .++.+|++++++++.+.+ | .|++++.++
T Consensus 159 ~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~-~~~~y~vd~-~~g~iD~d~l~~~~~~~~-----p-lvii~g~S~ 230 (493)
T PRK13580 159 ALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMF-HQRSYGVDP-DTGLLDYDEIAALAREFK-----P-LILVAGYSA 230 (493)
T ss_pred hhhccCCCCEEEeecCCCCCeeecCcccchhhhee-eeEecccCc-ccCccCHHHHHHHHhhcC-----C-EEEEeCccc
Confidence 00112334322 224444332333344211 556667774 357999999999998754 4 466667777
Q ss_pred cccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHh
Q 038818 242 AITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKAL 321 (486)
Q Consensus 242 ~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~ 321 (486)
. |.+.|+++|++||++||++++||+||+.+.+....+.........+|++++++||++.+|.| |+++++++ .. +.+
T Consensus 231 ~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~G-G~I~~~~~-l~-~~L 306 (493)
T PRK13580 231 Y-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRG-GLVLAKKE-YA-DAV 306 (493)
T ss_pred c-CCCcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCcEEEeCChhhccCCCe-EEEEecHH-HH-HHH
Confidence 6 55779999999999999999999999888765433221112235799999999999988884 77777654 22 222
Q ss_pred cCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEec-CCC
Q 038818 322 STNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVA-PRN 400 (486)
Q Consensus 322 ~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~~ 400 (486)
....+|+++... .....+...++..+....++++.++..+++++|++.|.+. ||.++. ..+
T Consensus 307 ~~a~P~i~gg~l-----------------~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~-G~~vv~ggTd 368 (493)
T PRK13580 307 DKGCPLVLGGPL-----------------PHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKR-GARLVTGGTD 368 (493)
T ss_pred hhCCCcccCCCc-----------------cHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhc-CCCccCCCCC
Confidence 222245443210 1112222334444433445678899999999999999987 888864 245
Q ss_pred eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEE---eeeeECC---EeEEEEEecCC---CCcHHHHHHH
Q 038818 401 FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYV---SHGMVAG---IYFIRFAVGAT---LTEDRHVIAA 471 (486)
Q Consensus 401 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~---~~~~~~~---~~~lR~~~~~~---~tt~~did~~ 471 (486)
++++.+.+.+. +...+.+.+.|.+.|+.+- .|++..+ ...||+++... ..+++||+++
T Consensus 369 shIV~V~lg~~-------------~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~i 435 (493)
T PRK13580 369 NHLVLIDVTSF-------------GLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEV 435 (493)
T ss_pred CCEEEEEeCCH-------------HHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHH
Confidence 78888887542 1122355667778887432 2333344 67899998532 2258899999
Q ss_pred HHHHHHHHHH
Q 038818 472 WKVVQEKLDG 481 (486)
Q Consensus 472 i~~l~~~~~~ 481 (486)
++.|.++++.
T Consensus 436 ad~l~~~l~~ 445 (493)
T PRK13580 436 AELIVKVLSN 445 (493)
T ss_pred HHHHHHHHHh
Confidence 9999988764
No 69
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.90 E-value=1.9e-21 Score=195.79 Aligned_cols=326 Identities=13% Similarity=0.114 Sum_probs=215.4
Q ss_pred HHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCC--CCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHc
Q 038818 88 GFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKL--PKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEI 165 (486)
Q Consensus 88 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~--~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~ 165 (486)
..+.+.+...+......|...++..++.+.+.+|+.+.+|. +++ +.++|+|+++++..++.+...
T Consensus 40 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~-------~i~~t~g~~~al~~~~~~l~~------ 106 (382)
T PRK06108 40 DFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPE-------RIAVTSSGVQALMLAAQALVG------ 106 (382)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcc-------eEEEeCChHHHHHHHHHHhcC------
Confidence 34555555555433345666667789999999999999884 433 688999999998776665533
Q ss_pred cccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCC-CCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 166 GRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKS-SSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 166 ~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~-~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
+++.|+++..+|..+...++..|+ +++.+|.+.+ ++|.+|+++|++.+++. +.+|+++.++|++|
T Consensus 107 -----~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~~~~~------~~~i~l~~p~NPtG 172 (382)
T PRK06108 107 -----PGDEVVAVTPLWPNLVAAPKILGA---RVVCVPLDFGGGGWTLDLDRLLAAITPR------TRALFINSPNNPTG 172 (382)
T ss_pred -----CCCEEEEeCCCccchHHHHHHCCC---EEEEeeCCCCCCCccCCHHHHHHhcCcc------ceEEEEECCCCCCC
Confidence 566788888999999999999999 9999999753 35789999999988643 33677889999999
Q ss_pred ccC---CchHHHHHHHHhCceEEeeccccchhcc-CccchhhhcCC--CCCCceeeccccccCC-CCcceEEEeeCchHH
Q 038818 245 TVD---PLGPLCDIAKRYSIWVHVDAAYAGSACI-CPEFRHFIDGI--EGADSFSLNAHKWFFT-TLDCCCLWVKNPNAL 317 (486)
Q Consensus 245 ~id---pl~~I~~i~~~~g~~lhvD~a~g~~~~~-~~~~~~~~~~~--~~aDsi~~~~hK~l~~-p~~~g~~~~~~~~~~ 317 (486)
.+- ++++|+++|+++|+|+++|++|+.+... .........-. ..-..+..+++|.++. +..+|+++.+++ ..
T Consensus 173 ~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~-~~ 251 (382)
T PRK06108 173 WTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPA-LG 251 (382)
T ss_pred cccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHH-HH
Confidence 774 5788999999999999999999875432 11111111101 1223567789998864 456898887543 32
Q ss_pred HHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Q 038818 318 IKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEI 395 (486)
Q Consensus 318 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 395 (486)
. .+.....+.. .+ ...+...++...+ +.+.++++.++..++.+++.+.|++++++++
T Consensus 252 ~-~~~~~~~~~~-----------------~~---~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 310 (382)
T PRK06108 252 Q-VLEKLIEYNT-----------------SC---VAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEV 310 (382)
T ss_pred H-HHHHHHHhcc-----------------cC---CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 2 2211001110 00 1122222222222 4456778888888999999999988888887
Q ss_pred ecCCCeeEE-EEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeE--CCEeEEEEEecCCCCcHHHHHHH
Q 038818 396 VAPRNFAVV-CFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMV--AGIYFIRFAVGATLTEDRHVIAA 471 (486)
Q Consensus 396 ~~~~~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~--~~~~~lR~~~~~~~tt~~did~~ 471 (486)
.. |..+.+ .+.+.+.. ....+.+.+. +.|+.+..+..+ .+..++|+++.. ++++++++
T Consensus 311 ~~-p~~g~~~~~~l~~~~--------------~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~---~~~~l~~~ 372 (382)
T PRK06108 311 AK-PDGAMYAFFRIPGVT--------------DSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR---DPARLDEA 372 (382)
T ss_pred cC-CCeeEEEEEeCCCCC--------------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC---CHHHHHHH
Confidence 64 444544 34443211 1234566554 457754443333 235789999953 67899999
Q ss_pred HHHHHHHHH
Q 038818 472 WKVVQEKLD 480 (486)
Q Consensus 472 i~~l~~~~~ 480 (486)
++.|+++++
T Consensus 373 l~~l~~~l~ 381 (382)
T PRK06108 373 VERLRRFLA 381 (382)
T ss_pred HHHHHHHHh
Confidence 999988654
No 70
>PLN02483 serine palmitoyltransferase
Probab=99.89 E-value=1.5e-20 Score=193.18 Aligned_cols=346 Identities=13% Similarity=0.096 Sum_probs=215.6
Q ss_pred cCCCCCCcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchH
Q 038818 69 THWQSPYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCE 148 (486)
Q Consensus 69 ~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~ 148 (486)
.++.+-.|+|+-...+..+..+.+.+..+-...... ...-+......++.+.+++++|.++ .++.++|+.
T Consensus 103 ~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~s-r~~~g~~~~~~ele~~lA~~~g~~~---------ai~~~~G~~ 172 (489)
T PLN02483 103 LNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSS-RVDGGTTKLHRELEELVARFVGKPA---------AIVFGMGYA 172 (489)
T ss_pred EEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCcc-ccccCCcHHHHHHHHHHHHHhCCCc---------EEEECCHHH
Confidence 455677899987544445555666666542111111 1101123444456677888888653 355566777
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCC
Q 038818 149 AILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAG 228 (486)
Q Consensus 149 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g 228 (486)
+|+.++.+... +++.|++++..|.|+..+++..|+ +++.++.+ |+++|++.|++....+
T Consensus 173 an~~~i~al~~-----------~Gd~Vi~d~~~h~s~~~~~~~~Ga---~v~~~~~~-------d~~~le~~l~~~i~~~ 231 (489)
T PLN02483 173 TNSTIIPALIG-----------KGGLIISDSLNHNSIVNGARGSGA---TIRVFQHN-------TPSHLEEVLREQIAEG 231 (489)
T ss_pred HHHHHHHHhCC-----------CCCEEEEcchhhHHHHHHHHHcCC---eEEEEeCC-------CHHHHHHHHHhhhhcc
Confidence 88755554332 677899999999999999999999 99999853 6788888877543211
Q ss_pred -------CccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhh--hcCC--CCCCceeeccc
Q 038818 229 -------LIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHF--IDGI--EGADSFSLNAH 297 (486)
Q Consensus 229 -------~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~--~~~~--~~aDsi~~~~h 297 (486)
...++|++....+++|.+.++++|+++|++||+++++|+||+.+... +..+.. ..++ ..+|.++.+++
T Consensus 232 ~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G-~~G~g~~~~~~v~~~~~dI~~~SfS 310 (489)
T PLN02483 232 QPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVG-KTGRGVCELLGVDPADVDIMMGTFT 310 (489)
T ss_pred ccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccC-CCCCchHHhcCCCcccCcEEEEecc
Confidence 11235666667799999999999999999999999999999744321 111110 1122 35789999999
Q ss_pred cccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh-c---hHHHHHHH
Q 038818 298 KWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF-G---VANLRNFL 373 (486)
Q Consensus 298 K~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~-g---~~g~~~~~ 373 (486)
|.++.+ .|+++ .+++...........+.+.. ..-......+..+++.+ + .+...++.
T Consensus 311 Ks~g~~--GG~i~-~~~~li~~l~~~~~~~~~~~----------------~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~ 371 (489)
T PLN02483 311 KSFGSC--GGYIA-GSKELIQYLKRTCPAHLYAT----------------SMSPPAVQQVISAIKVILGEDGTNRGAQKL 371 (489)
T ss_pred hhcccC--ceEEE-cCHHHHHHHHHhCccccccC----------------CcCHHHHHHHHHHHHHHHhCccccchHHHH
Confidence 999764 26555 44444332211111111110 00001111222334332 1 22345567
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeE----C
Q 038818 374 RSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMV----A 449 (486)
Q Consensus 374 ~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~ 449 (486)
++..++++++++.|+++ ++++..+...+++.+.+... .....+.+.|.++|+.+.. ..+ .
T Consensus 372 ~~l~~~~~~l~~~L~~~-G~~v~~~~~sp~~~l~l~~~--------------~~~~~~~~~Ll~~GI~v~~-~~fp~~p~ 435 (489)
T PLN02483 372 AQIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNP--------------AKIPAFSRECLKQNVAVVV-VGFPATPL 435 (489)
T ss_pred HHHHHHHHHHHHHHHHC-CCcccCCCCCCEEEEEECCH--------------HHHHHHHHHHHHCCcEEee-eCCCCCCC
Confidence 88899999999999998 78876555556666655431 1233567777788886543 222 2
Q ss_pred CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 450 GIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 450 ~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
+...+|+++. ...+++||+++++.|+++++.+
T Consensus 436 ~~~~vRi~is-a~~t~edId~~l~~L~~~~~~~ 467 (489)
T PLN02483 436 LLARARICIS-ASHSREDLIKALEVISEVGDLV 467 (489)
T ss_pred CCceEEEEeC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 3467999985 4567779999999999988654
No 71
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.89 E-value=1.1e-20 Score=203.81 Aligned_cols=364 Identities=11% Similarity=0.020 Sum_probs=230.1
Q ss_pred hhHHhhcCCCCCCC--CCCCHHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHHHH-------HHhhcCCCcccc
Q 038818 35 PGYLRKRLPESAPY--NPEPIETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGEM-------LSSGFNVVGFNW 105 (486)
Q Consensus 35 p~~~~~~~~~~~p~--~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-------l~~~~n~~~~~~ 105 (486)
|+.++.. +..||. .+.|+.+++++++++...|.. +..|.|.-+-+.-.|+++-+. +++ +.++..
T Consensus 68 P~~i~~~-~l~lp~~~~~~sE~e~~~~~~~la~kN~~---~~~fiG~G~y~~~~P~~v~~~i~~~~~~~Ta-ytPYqa-- 140 (993)
T PLN02414 68 PKSIRLD-SMKLSKYDEGLTESQMLEHMKSLASKNKV---FKSYIGMGYYNTHVPPVILRNILENPGWYTQ-YTPYQA-- 140 (993)
T ss_pred CHHHhcC-CCCCCCCCCCCCHHHHHHHHHHHHhcCCc---cccccCCCCCCccCCHHHHHHHHhChHHHhh-cCCCch--
Confidence 4444332 556772 468999999999987666543 334554322122334444232 232 223222
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHH
Q 038818 106 MSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSAL 185 (486)
Q Consensus 106 ~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 185 (486)
+.+++.-+.-.+...++++|+|++.+ +..++.++|.+...+++ +.... .+ ++.+|++++..|++.
T Consensus 141 EisQG~lqal~~~Qt~ia~LtG~~~a-------naSL~d~aTAaaea~~~-a~~~~------~g-~~~~VlVs~~~hP~~ 205 (993)
T PLN02414 141 EIAQGRLESLLNYQTMITDLTGLPMS-------NASLLDEGTAAAEAMAM-CNNIL------KG-KKKKFLIASNCHPQT 205 (993)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCChh-------hEeecCChHHHHHHHHH-HHhcc------cC-CCCEEEEcCccCHhH
Confidence 22233333334556999999999986 78999999977644333 33220 01 346799999999986
Q ss_pred HHHH----HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCc
Q 038818 186 QKAA----QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSI 261 (486)
Q Consensus 186 ~~a~----~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~ 261 (486)
...+ +..|+ +|+.+|.+. .+ ...++ . +.++++..+.+|.+.|+++|+++||++|+
T Consensus 206 ~~v~~t~a~~~Gi---eV~~v~~~~-----~~------~~~~~------v-~~vlvq~P~~~G~v~dv~~I~~~ah~~Ga 264 (993)
T PLN02414 206 IDVCQTRADGLGL---EVVVADEKD-----FD------YSSGD------V-CGVLVQYPATDGEVLDYAEFVKNAHANGV 264 (993)
T ss_pred HHHHHHhhhhcCC---EEEEecchh-----hc------cccCc------e-EEEEEecCCCCeEEcCHHHHHHHHHHcCC
Confidence 5444 45688 899998752 11 01111 1 23446666779999999999999999999
Q ss_pred eEEeeccccchhccCccchhhhcCCCCCCceeecccccc-----CCCCcceEEEeeCchHHHHHhcCCcc-cccCccCCC
Q 038818 262 WVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWF-----FTTLDCCCLWVKNPNALIKALSTNPE-FLRNKASDS 335 (486)
Q Consensus 262 ~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l-----~~p~~~g~~~~~~~~~~~~~~~~~~~-y~~~~~~~~ 335 (486)
+++| +|+..+.......... ++|+++.++|||+ ++|. +|+++++++. . ...|+ .+.... +.
T Consensus 265 L~iV-aad~lal~~l~~pge~-----GADi~vgsgqKwg~P~G~GGP~-aGflavr~~~--~---r~~PgriVG~s~-d~ 331 (993)
T PLN02414 265 KVVM-ATDLLALTMLKPPGEW-----GADIVVGSAQRFGVPMGYGGPH-AAFLATSQEY--K---RLMPGRIIGVSV-DS 331 (993)
T ss_pred EEEE-EECHHHhcCCCCHhhc-----cCcEEEECCCccccCCCCCCCC-eeEEEECHHH--H---hhCCCcccCccc-CC
Confidence 9999 8876655554322222 8999999999998 4444 8999999763 2 22343 333211 11
Q ss_pred CCccCCC---CccccCCCCC-------CchHHHHHH-----HHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCC
Q 038818 336 KQVVDYK---DWQITLSRRF-------RALKLWLVL-----RSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRN 400 (486)
Q Consensus 336 ~~~~~~~---~~~~~~sr~~-------~~l~~~~~l-----~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~ 400 (486)
.+...+. ..-.+.-|+. ...++++.+ ..+|..|++++.+++.+++.++++.|.+. ++++..++.
T Consensus 332 ~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~-G~~~~~~~~ 410 (993)
T PLN02414 332 SGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKL-GFQVQSLPF 410 (993)
T ss_pred CCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhc-CCccCCCCC
Confidence 1111110 0011111221 112333333 45688999999999999999999999875 799988888
Q ss_pred eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 038818 401 FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQE 477 (486)
Q Consensus 401 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~ 477 (486)
+.+|+|++.. ..++.++|.++|+. +... . ...+|+|+ +..+|++|||+++++|..
T Consensus 411 f~~vt~~~~~-----------------~~~v~~~L~~~gI~-l~~~--~-~~~lrvs~-~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 411 FDTVKVKCSD-----------------ADAIADAAAKVGIN-LRVV--D-ANTVTVSF-DETTTLEDVDKLFKVFAG 465 (993)
T ss_pred cCeEEEecCC-----------------HHHHHHHHHHCCCe-eEEe--c-CCeEEEEe-eccCCHHHHHHHHHHHcc
Confidence 8899998642 24567777778873 2221 1 24699999 578899999999999964
No 72
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.89 E-value=2.8e-22 Score=198.94 Aligned_cols=337 Identities=14% Similarity=0.057 Sum_probs=215.1
Q ss_pred ecCCCCCHHHHHHHHHHhhc----CCCccccccC---hhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCC-chHHH
Q 038818 79 YFPSSGSIAGFLGEMLSSGF----NVVGFNWMSS---PAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGT-TCEAI 150 (486)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~----n~~~~~~~~~---~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~g-gt~a~ 150 (486)
|.|++...|..+.+.+..++ |.+...+..+ +.+.++..++++.+++++|.+.+. ..+||+| ||+|+
T Consensus 3 ~~pGp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~------~vvf~~gs~T~a~ 76 (355)
T cd00611 3 FSAGPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNY------KVLFLQGGATGQF 76 (355)
T ss_pred CCCCCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCCchHHH
Confidence 56777777777777766665 4444555555 556688889999999999986542 6788877 89887
Q ss_pred HHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccC-HHHHHHHHHHHHHCCC
Q 038818 151 LCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLT-PESLQAAIDLDIQAGL 229 (486)
Q Consensus 151 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d-~~~L~~~l~~~~~~g~ 229 (486)
..++.....+ +.+.++|++....|.+ .+.++..|+ +++.+++++++. ..+ ++..+..++++
T Consensus 77 ~~~~~~l~~~--------~~~~~~i~~g~~~~~~-~~~a~~~g~---~~~~~~~~~~g~-~~~~~~~~~~~~~~~----- 138 (355)
T cd00611 77 AAVPLNLLGD--------KGTADYVVTGAWSAKA-AKEAKRYGG---VVVIVAAKEEGK-YTKIPDVETWDLAPD----- 138 (355)
T ss_pred HHHHHhcCCC--------CCeEEEEECCHHHHHH-HHHHHhcCC---CcEEEecccccC-CCCCCCHhhcCCCCC-----
Confidence 6655543210 1145666665444444 445677798 999999864221 113 22222333332
Q ss_pred ccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEE
Q 038818 230 IPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCL 309 (486)
Q Consensus 230 ~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~ 309 (486)
+.+|.+++.+|.+|.+- . ++++.||+.++||++++.+....+- +..|.+..++||+++ |.|.|++
T Consensus 139 -~~lV~~~h~~t~tG~~~--~---~i~~~~g~~~~VDa~qs~g~~~idv--------~~~~~~~ss~~K~lG-P~G~g~l 203 (355)
T cd00611 139 -AAYVHYCSNETIHGVEF--D---EVPDTGGVPLVADMSSNILSRPIDV--------SKFGVIYAGAQKNLG-PAGVTVV 203 (355)
T ss_pred -CCEEEEeCCcccccEEc--c---eecccCCCeEEEEccccccCCCCCH--------HHhCEEEeecccccC-CCceEEE
Confidence 34799999999999972 2 4555699999999999887775542 123444555999875 9999999
Q ss_pred EeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC-CCchHHHHHHHHhchH-HHHHHHHHHHHHHHHHHHHH
Q 038818 310 WVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR-FRALKLWLVLRSFGVA-NLRNFLRSHVRMAQLFQELV 387 (486)
Q Consensus 310 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L 387 (486)
+++++.+- +.-...+.+..... ...... . ..+-. ....++..+++.+-.+ |++++.++..++++++++.|
T Consensus 204 ~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~-~-~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l 275 (355)
T cd00611 204 IVRKDLLG-KARKITPSMLNYKT-----HADNNS-L-YNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTI 275 (355)
T ss_pred EECHHHHh-hcccCCCCcccHHH-----HHhcCC-C-CCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 99876442 11111111110000 000000 0 01111 1335777788888777 79999999999999999999
Q ss_pred hCCCCeE-EecC--CCe-eEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCC
Q 038818 388 GGDNRFE-IVAP--RNF-AVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLT 463 (486)
Q Consensus 388 ~~~~~~~-~~~~--~~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~t 463 (486)
+++|++. ...+ ... .+++|.+... .+..++.+.+.++|.. .... ....+.+|+|+. +.+
T Consensus 276 ~~~~gl~~~~~~~~~rs~~vvsf~~~~~--------------~l~~~~~~~~~r~G~~-~~~~-~~~~g~vR~S~~-~~n 338 (355)
T cd00611 276 DNSNGFYRGPVDKRARSRMNVPFRLGKE--------------ELEKEFLKEAEAAGMI-GLKG-HRSVGGIRASIY-NAL 338 (355)
T ss_pred HhCccccccCCCHHHcCceEEEEEcCCh--------------hhhHHHHHHHHHCCCc-ccCC-CcccCeEEEEcc-CCC
Confidence 9998863 2111 133 4588886541 2234445567778984 3322 222368999995 677
Q ss_pred cHHHHHHHHHHHHHHH
Q 038818 464 EDRHVIAAWKVVQEKL 479 (486)
Q Consensus 464 t~~did~~i~~l~~~~ 479 (486)
|++|||+++++|+++.
T Consensus 339 t~edi~~l~~al~~~~ 354 (355)
T cd00611 339 SLEGVQALADFMKEFQ 354 (355)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 8889999999999863
No 73
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.89 E-value=1.1e-20 Score=190.89 Aligned_cols=334 Identities=13% Similarity=0.065 Sum_probs=218.2
Q ss_pred HHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccc
Q 038818 88 GFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGR 167 (486)
Q Consensus 88 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 167 (486)
..+.+.+...+......|........+++.+.+++.+..|.... ....++|+|+++++..++.+...
T Consensus 47 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-----~~~i~~~~g~~~a~~~~~~~~~~-------- 113 (393)
T PRK05764 47 EHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYD-----PSQVIVTTGAKQALYNAFMALLD-------- 113 (393)
T ss_pred HHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCC-----HHHEEEeCCcHHHHHHHHHHhcC--------
Confidence 34555555555443445655556788999999999888775321 12689999999998776665533
Q ss_pred cCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC
Q 038818 168 ENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD 247 (486)
Q Consensus 168 ~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id 247 (486)
++..|+++..+|..+..+++.+|+ +++.+|+++++.+.+|+++|++++++.+ .+|+++.++|++|.+-
T Consensus 114 ---~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~------~~v~~~~p~NPtG~~~ 181 (393)
T PRK05764 114 ---PGDEVIIPAPYWVSYPEMVKLAGG---VPVFVPTGEENGFKLTVEQLEAAITPKT------KALILNSPSNPTGAVY 181 (393)
T ss_pred ---CCCEEEecCCCCcchHHHHHHcCC---EEEEEecCcccCCcCCHHHHHHhhCccc------eEEEEECCCCCCCccc
Confidence 566788899999999999999999 9999999865567899999999886432 3678888999999984
Q ss_pred ---CchHHHHHHHHhCceEEeeccccchhccCcc---chhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHH
Q 038818 248 ---PLGPLCDIAKRYSIWVHVDAAYAGSACICPE---FRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKA 320 (486)
Q Consensus 248 ---pl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~---~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~ 320 (486)
++++|+++|++||+|+++|.+|+.+...... ......+...-+.+..++.|.++.| ..+|+++.. ++...+.
T Consensus 182 ~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~-~~~~~~~ 260 (393)
T PRK05764 182 SPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGP-KELIKAM 260 (393)
T ss_pred CHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecC-HHHHHHH
Confidence 5889999999999999999999754321111 1111112223456677889999855 347777643 4333322
Q ss_pred hcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhc--hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC
Q 038818 321 LSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFG--VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP 398 (486)
Q Consensus 321 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 398 (486)
......+ +-....+..+++.+.+. .+.+.+..++..++++++.+.|++++++++..
T Consensus 261 ~~~~~~~---------------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~- 318 (393)
T PRK05764 261 SKLQSHS---------------------TSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGLECPK- 318 (393)
T ss_pred HHHHhhc---------------------ccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccC-
Confidence 1111000 00123344455555442 45566677777888999999999988888764
Q ss_pred CCeeEE-EEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 399 RNFAVV-CFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 399 ~~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
|..+.+ .+.+.+... .. .....++.+.+. +.|+.+.++..+...+++|+++.. ++++++++++.|.
T Consensus 319 ~~g~~~~~~~~~~~~~-------~~--~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~---~~~~~~~~i~~l~ 386 (393)
T PRK05764 319 PEGAFYVFPNVSKLLG-------KS--ITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYAT---SLEDLEEGLERIE 386 (393)
T ss_pred CCcceEEEEecccccc-------cc--cCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecC---CHHHHHHHHHHHH
Confidence 444433 334432110 00 001235565554 457755444434336789999853 5789999999999
Q ss_pred HHHHH
Q 038818 477 EKLDG 481 (486)
Q Consensus 477 ~~~~~ 481 (486)
+++++
T Consensus 387 ~~~~~ 391 (393)
T PRK05764 387 RFLES 391 (393)
T ss_pred HHHHh
Confidence 88764
No 74
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.89 E-value=6.1e-21 Score=189.59 Aligned_cols=317 Identities=14% Similarity=0.107 Sum_probs=197.2
Q ss_pred HHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHc
Q 038818 86 IAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEI 165 (486)
Q Consensus 86 ~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~ 165 (486)
.|..+.+.+..+.+. |. ....+.+++.+++++++|.+ .+++|+|+|+|+..++.+....
T Consensus 25 ~~~~v~~a~~~~~~~----~~---~~~~~~~~~~~~~a~~~g~~---------~~~~~~g~t~al~~al~al~~~----- 83 (363)
T TIGR01437 25 VSDEVADAQKRGAQN----YF---EIKELVNKTGEYIANLLGVE---------DAVIVSSASAGIAQSVAAVITR----- 83 (363)
T ss_pred CCHHHHHHHHHHHhc----CC---CHHHHHHHHHHHHHHhhCCC---------eEEEEcCHHHHHHHHHHHHhcC-----
Confidence 455555555555432 11 13467778889999999975 4689999999999888876431
Q ss_pred ccc---------CCCCeEEEecCCCchH-----HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCcc
Q 038818 166 GRE---------NISRLVVYGSDQTHSA-----LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIP 231 (486)
Q Consensus 166 ~~~---------~~~~~~v~~s~~~H~s-----~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p 231 (486)
|++ ..++..|+++. .|+. +..++...|+ +++.++.+ +.+|+++++++|.+.++
T Consensus 84 Gd~~~~~~~~~s~~~~~eVi~~~-~~~~~~~~~~~~~~~~~g~---~~v~v~~~----~~~d~~~le~ai~~~t~----- 150 (363)
T TIGR01437 84 GNRYLVENLHDSKIEVNEVVLPK-GHNVDYGAPVETMVRLGGG---KVVEAGYA----NECSAEQLEAAITEKTA----- 150 (363)
T ss_pred CCcchhhcccccccccceEEEEC-ccchhcCCchHHHHHhcCC---eEEEEcCC----CCCCHHHHHHhcChhce-----
Confidence 110 00223566665 5543 3466778898 88888763 37999999999987764
Q ss_pred EEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEe
Q 038818 232 LFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWV 311 (486)
Q Consensus 232 ~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~ 311 (486)
.+++++.+++++|.+.|+++|+++|++||+++|+|+||+... .... .+ ++|.+++++||++.+|. .|+++.
T Consensus 151 ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~------~~~~-~~-g~D~~~~S~~K~l~gp~-~G~l~~ 221 (363)
T TIGR01437 151 AILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL------QKYY-RL-GADLVIYSGAKAIEGPT-SGLVLG 221 (363)
T ss_pred EEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch------HHHH-Hc-CCCEEEEeCCcccCCCc-eEEEEE
Confidence 234466777889999999999999999999999999996211 1111 11 58999999999999987 777665
Q ss_pred eCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC
Q 038818 312 KNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDN 391 (486)
Q Consensus 312 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~ 391 (486)
+ ++.+..... +..... . .++.+. ...+++..++..+-..+ .+.+++..+.++++.+.|+++|
T Consensus 222 ~-~~~i~~~~~----~~~~~~----~-------~~~~~~-~~~~gl~aAl~~~~~~~-~~~~~~~~~~~~~l~~~L~~i~ 283 (363)
T TIGR01437 222 K-KKYIEWVKL----QSKGIG----R-------AMKVGK-ENILGLTAALEQYLSTG-KESGAEMVAKLTPFIEALNTLK 283 (363)
T ss_pred c-HHHHHHHHh----ccCCCc----c-------eeccCH-HHHHHHHHHHHHHHccC-cccHHHHHHHHHHHHHHHhcCC
Confidence 4 333332110 100000 0 001100 11244555555442222 2333444456778999999999
Q ss_pred CeEEecCCC-------eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCc
Q 038818 392 RFEIVAPRN-------FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTE 464 (486)
Q Consensus 392 ~~~~~~~~~-------~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt 464 (486)
++++..++. ...+.|...... ....++.+.|.+.+.-++........+.+|+.+. .++
T Consensus 284 g~~~~~~~~~~~~~~~~~~v~~~~~~~g-------------~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~--~~~ 348 (363)
T TIGR01437 284 GVSASIVQDEAGRDIARAEIRFDESELG-------------MTAADVVQALRQGEPAIYTRGYKANEGIIEIDPR--SVT 348 (363)
T ss_pred CeEEEEecCCCCCcCceEEEEEeccCCC-------------CCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEee--cCC
Confidence 998874321 122334332111 1134566777666643333222334567888874 356
Q ss_pred HHHHHHHHHHHHHH
Q 038818 465 DRHVIAAWKVVQEK 478 (486)
Q Consensus 465 ~~did~~i~~l~~~ 478 (486)
++|+|.++++|+++
T Consensus 349 ~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 349 GGQLDIIVERIREI 362 (363)
T ss_pred HHHHHHHHHHHHHh
Confidence 88999999999876
No 75
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.89 E-value=2.4e-21 Score=196.27 Aligned_cols=342 Identities=13% Similarity=0.079 Sum_probs=208.1
Q ss_pred CcceecCCCCCHHHHHHHHHHhhc-C------CCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCch
Q 038818 75 YYFAYFPSSGSIAGFLGEMLSSGF-N------VVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTC 147 (486)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~-n------~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt 147 (486)
+++.+.+++...+..+.+.+...+ . +....|...+....+|+.+.+++++++|.+.. . ++++|||
T Consensus 20 ~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~-------~-v~~~sgt 91 (402)
T cd00378 20 ETLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYA-------N-VQPHSGS 91 (402)
T ss_pred hCeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCce-------e-eecCCcH
Confidence 356666665444444555554332 1 11223334555677888788999999998753 2 4445678
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHH-----HHHcCCCCCCeEEEecCCC-CCcccCHHHHHHHH
Q 038818 148 EAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKA-----AQIAGIDPKNFRAIKTTKS-SSFTLTPESLQAAI 221 (486)
Q Consensus 148 ~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a-----~~~~G~g~~~v~~v~~d~~-~~~~~d~~~L~~~l 221 (486)
+|+..++.+... +++.|+++..+|.+.... ++..|. ++..++++.+ +++.+|+++|++++
T Consensus 92 ~a~~~~l~~l~~-----------~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~id~~~l~~~i 157 (402)
T cd00378 92 QANLAVYFALLE-----------PGDTIMGLDLSHGGHLTHGSFTKVSASGK---LFESVPYGVDPETGLIDYDALEKMA 157 (402)
T ss_pred HHHHHHHHHhcC-----------CCCEEEEecCccCccccccccccccccce---eEEEecCCcCcccCCcCHHHHHHHH
Confidence 998877766533 566788887777653222 555676 7777777543 25799999999998
Q ss_pred HHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccC
Q 038818 222 DLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFF 301 (486)
Q Consensus 222 ~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~ 301 (486)
.+.. +.+|+++.+. +|...|+++|+++|+++|+++++|++|..+.......... +..+|.++.++||++.
T Consensus 158 ~~~~-----~~~v~~~~~~--~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~---~~~~dv~~~s~sK~l~ 227 (402)
T cd00378 158 LEFK-----PKLIVAGASA--YPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNP---LPGADVVTTTTHKTLR 227 (402)
T ss_pred HhCC-----CCEEEecCcc--cCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCc---ccCCcEEEeccccCCC
Confidence 6421 3355555543 4677899999999999999999999975544322111111 1257889999999997
Q ss_pred CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHH
Q 038818 302 TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQ 381 (486)
Q Consensus 302 ~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~ 381 (486)
+|.+ |+++.+++....+......++... ........++..++......++.++.++..++++
T Consensus 228 G~~g-g~i~~~~~~~~~~l~~~~~~~~~~-----------------~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~ 289 (402)
T cd00378 228 GPRG-GLILTRKGELAKKINSAVFPGLQG-----------------GPHLHVIAAKAVALKEALEPEFKAYAKQVVENAK 289 (402)
T ss_pred CCCc-eEEEeccHHHHHHHHHHhCccccC-----------------CchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 7654 555565534433221111111110 0000111122223333322356778888999999
Q ss_pred HHHHHHhCCCCeEEec-CCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEe---eeeE---CCEeEE
Q 038818 382 LFQELVGGDNRFEIVA-PRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVS---HGMV---AGIYFI 454 (486)
Q Consensus 382 ~l~~~L~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~~~~---~~~~~l 454 (486)
++.+.|++. ++++.. +...+.+.+.+.+... + ..++.+.+.+.|+.+.. +... .+...+
T Consensus 290 ~l~~~L~~~-g~~~~~~~~~~~~v~v~~~~~~~-----------~--~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~l 355 (402)
T cd00378 290 ALAEALKER-GFKVVSGGTDNHLVLVDLRPKGI-----------T--GKAAEDALEEAGITVNKNTLPWDPSSPFVPSGI 355 (402)
T ss_pred HHHHHHHhC-CCeEeecCCCCeEEEEeCCccCC-----------C--HHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCee
Confidence 999999987 888764 3345666666653210 0 12445556667875321 1111 134689
Q ss_pred EEEecCC---CCcHHHHHHHHHHHHHHHH
Q 038818 455 RFAVGAT---LTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 455 R~~~~~~---~tt~~did~~i~~l~~~~~ 480 (486)
|++++.. ..+++||+.+++.|+++++
T Consensus 356 Ri~~~~~~~~~~~~~di~~~~~~l~~~~~ 384 (402)
T cd00378 356 RIGTPAMTTRGMGEEEMEEIADFIARALK 384 (402)
T ss_pred EecCHHHHHhCCCHHHHHHHHHHHHHHHh
Confidence 9988432 2368899999999998764
No 76
>PLN02822 serine palmitoyltransferase
Probab=99.89 E-value=8.7e-20 Score=187.17 Aligned_cols=313 Identities=11% Similarity=0.064 Sum_probs=202.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.....++.+.+++++|.++ ..++++|++ ++..++.+... ++++|++....|+++..++++
T Consensus 153 ~~~~~~Lee~La~~~~~~~--------~i~~s~G~~-a~~sai~a~~~-----------~gd~Ii~d~~~H~s~~~~~~l 212 (481)
T PLN02822 153 IDVHLDCETKIAKFLGTPD--------SILYSYGLS-TIFSVIPAFCK-----------KGDIIVADEGVHWGIQNGLYL 212 (481)
T ss_pred HHHHHHHHHHHHHHhCCCC--------EEEECCHHH-HHHHHHHHhCC-----------CCCEEEEeCCccHHHHHHHHH
Confidence 4556667778888888654 356666554 66555554322 677888899999999999999
Q ss_pred cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCC---Ccc-EEEEeecCCccccccCCchHHHHHHHHhCceEEeec
Q 038818 192 AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAG---LIP-LFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDA 267 (486)
Q Consensus 192 ~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g---~~p-~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~ 267 (486)
.|. +++.++.+ |+++|+..+++..+.. ..+ .+|++....+++|.+.|+++|+++|++||+++++|+
T Consensus 213 s~~---~~~~~~~n-------d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDE 282 (481)
T PLN02822 213 SRS---TIVYFKHN-------DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDE 282 (481)
T ss_pred cCC---eEEEECCC-------CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEEC
Confidence 988 88888764 5677777776543221 122 578888888999999999999999999999999999
Q ss_pred cccchhccCccchhh--hcCC--CCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCC
Q 038818 268 AYAGSACICPEFRHF--IDGI--EGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKD 343 (486)
Q Consensus 268 a~g~~~~~~~~~~~~--~~~~--~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 343 (486)
+|+.+.+ ....+.. ..++ ...|.++.+..|.++.+ .|+++. ++............|++..
T Consensus 283 a~s~gvl-G~~G~G~~e~~~v~~~~~dii~~s~sKalg~~--GG~i~g-~~~ii~~~~~~~~~~~fsa------------ 346 (481)
T PLN02822 283 SNSFGVL-GKSGRGLSEHFGVPIEKIDIITAAMGHALATE--GGFCTG-SARVVDHQRLSSSGYVFSA------------ 346 (481)
T ss_pred Ccccccc-CCCCCChHHHcCCCCCCCeEEEecchhhhhhC--CeEEEc-CHHHHHHHHhcCCceeecc------------
Confidence 9974432 2112111 1123 36789999999999743 255554 4434332211222222211
Q ss_pred ccccCCCCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCcc
Q 038818 344 WQITLSRRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANE 422 (486)
Q Consensus 344 ~~~~~sr~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~ 422 (486)
+.+. .+.++..++..+ +...++.++..+++++|++.|++.+++++..++.++++.+.+...... ..
T Consensus 347 -----~lPp~~~~Aa~~aL~~l--~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~l~~~~~~------~~ 413 (481)
T PLN02822 347 -----SLPPYLASAAITAIDVL--EDNPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFLHLEKSTGS------AK 413 (481)
T ss_pred -----ccCHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEEEeCCCccc------cc
Confidence 1010 111222233332 223567888999999999999988788887666777887877532100 00
Q ss_pred chHHHHHHHHHHHH-hcCcEEEee--eeEC---CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 423 GANELNRKLLESIN-ASGQLYVSH--GMVA---GIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 423 ~~~~~~~~l~~~l~-~~g~~~~~~--~~~~---~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
......+++.++|. ++|+++... ..+. ....+|++++ ...|++||+++++.|++++..+++
T Consensus 414 ~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is-~~~t~edI~~~~~~l~~~~~~~~~ 480 (481)
T PLN02822 414 EDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVS-AGHTESDILKASESLKRVAASVLK 480 (481)
T ss_pred chHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEEC-CCCCHHHHHHHHHHHHHHHHHHhc
Confidence 11234467788887 678754322 1111 2347999984 566888999999999999988764
No 77
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.89 E-value=1.7e-20 Score=187.47 Aligned_cols=337 Identities=12% Similarity=0.065 Sum_probs=203.5
Q ss_pred cCCCCCCcceecCCCCCHHHHHHHHHHhhcCCC--ccccccChh----hHHHHHHHHHHHHHHcCCCCCCccCCCcceEE
Q 038818 69 THWQSPYYFAYFPSSGSIAGFLGEMLSSGFNVV--GFNWMSSPA----ATELENIVMDWLGEMLKLPKSFLFSGTGGGVI 142 (486)
Q Consensus 69 ~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~--~~~~~~~~~----~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~ 142 (486)
..+.+-.|+|+-..++..++ +.+.+..+..+. ......+.. ...+-.++++.+++++|.+. .++
T Consensus 7 ~~~~s~~YL~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~---------~l~ 76 (370)
T PRK05937 7 IDFVTNDFLGFSRSDTLVHE-VEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE---------AFI 76 (370)
T ss_pred EEeECCCccCCCCCHHHHHH-HHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe---------EEE
Confidence 45667789999765444443 444554443211 111122222 45666778899999999853 355
Q ss_pred cCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHH
Q 038818 143 QGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAID 222 (486)
Q Consensus 143 t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~ 222 (486)
.++|+.+|+. +..+... ++.+|+.+...|.|+..+++.+.. ..+.++ ..|+++|+++|+
T Consensus 77 ~~sG~~a~~~-~~~~~~~----------~~d~ii~d~~~H~sv~~~~~~~~~---~~~~~~-------~~d~~~l~~~l~ 135 (370)
T PRK05937 77 VPSGYMANLG-LCAHLSS----------VTDYVLWDEQVHISVVYSLSVISG---WHQSFR-------HNDLDHLESLLE 135 (370)
T ss_pred ECChHHHHHH-HHHHhCC----------CCCEEEEEhhhhHHHHHHHHHcCC---ceEEec-------CCCHHHHHHHHH
Confidence 6666778853 2222111 456788889999999999887642 333332 568999999998
Q ss_pred HHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhh--cCCCCCCceeecccccc
Q 038818 223 LDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFI--DGIEGADSFSLNAHKWF 300 (486)
Q Consensus 223 ~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~--~~~~~aDsi~~~~hK~l 300 (486)
+..+.+....+|+++++++++|.+.|+++|+++|+++|+++|||+||+.+.+..+ .+... .+....+.+..+++|.+
T Consensus 136 ~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~-g~g~~~~~~~~~~~~~~~tlsK~~ 214 (370)
T PRK05937 136 SCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDD-GKGFCHSLGYENFYAVLVTYSKAL 214 (370)
T ss_pred hhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCC-CCchHHhhCCCCCcEEEEechhhh
Confidence 6543222345677889999999999999999999999999999999986544322 11110 12223345567788987
Q ss_pred CCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHH
Q 038818 301 FTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMA 380 (486)
Q Consensus 301 ~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a 380 (486)
+ |.|+++++.++ ..........+|.+... .......++..++..+-.++ ....++..+++
T Consensus 215 g-~~G~~vl~~~~--~~~~~~~~~~~~~~s~~----------------~~~~~~~a~~aal~~l~~~~-~~~~~~l~~l~ 274 (370)
T PRK05937 215 G-SMGAALLSSSE--VKQDLMLNSPPLRYSTG----------------LPPHLLISIQVAYDFLSQEG-ELARKQLFRLK 274 (370)
T ss_pred h-cCceEEEcCHH--HHHHHHHhCCCCeecCC----------------CCHHHHHHHHHHHHHHHhCc-HHHHHHHHHHH
Confidence 5 56777665433 11111111222322110 00112233344555443333 34567788888
Q ss_pred HHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecC
Q 038818 381 QLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGA 460 (486)
Q Consensus 381 ~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~ 460 (486)
+++.+.|.... + ...+.+.+... ....+.+.|.++|+. +........+++|+++ +
T Consensus 275 ~~l~~~l~~~~-------~-~~~~~i~~~~~---------------~~~~~~~~L~~~gi~-v~~~~~~~~~~iRis~-~ 329 (370)
T PRK05937 275 EYFAQKFSSAA-------P-GCVQPIFLPGI---------------SEQELYSKLVETGIR-VGVVCFPTGPFLRVNL-H 329 (370)
T ss_pred HHHHHhcCCCC-------C-CCEEEEEeCCh---------------hHHHHHHHHHHCCee-EEeeCCCCCCEEEEEc-C
Confidence 88888876431 0 01222333321 124567777777873 4432222345799998 5
Q ss_pred CCCcHHHHHHHHHHHHHHHHHH
Q 038818 461 TLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 461 ~~tt~~did~~i~~l~~~~~~l 482 (486)
..+|++|||++++.|+++.+++
T Consensus 330 ~~~t~edid~l~~~L~~~~~~~ 351 (370)
T PRK05937 330 AFNTEDEVDILVSVLATYLEKY 351 (370)
T ss_pred CCCCHHHHHHHHHHHHHHHHHh
Confidence 7888889999999999988664
No 78
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.88 E-value=2.3e-20 Score=166.30 Aligned_cols=303 Identities=17% Similarity=0.144 Sum_probs=219.9
Q ss_pred HHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCC
Q 038818 118 VMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPK 197 (486)
Q Consensus 118 ~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~ 197 (486)
..+.+++.+|++. .-+|.|+-+|-+..|.+.+. +++.|++...+||+-.-+|...|+
T Consensus 66 F~~dlaeFlg~D~---------~R~t~GARe~KfavMhal~~-----------~gd~vV~D~~aHYttyvAAEragl--- 122 (382)
T COG1103 66 FLEDLAEFLGMDE---------VRVTAGAREAKFAVMHALCK-----------EGDWVVVDSLAHYTTYVAAERAGL--- 122 (382)
T ss_pred HHHHHHHHhCCce---------eeecccchhhHHHHHHHhcc-----------CCCEEEEcCcchHHHHHHHHhcCC---
Confidence 3445899999974 57899999999877776654 677788899999999999999999
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCC-CccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccC
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAG-LIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACIC 276 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g-~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~ 276 (486)
+|..||......+.++++...+.|++..+++ ..|.+.++|++....|.+.|.++++++|++||+++.+.+||..+-++.
T Consensus 123 ~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpv 202 (382)
T COG1103 123 NVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPV 202 (382)
T ss_pred eEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccc
Confidence 9999996554578999999999999988775 678899999999999999999999999999999999999998776654
Q ss_pred ccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchH
Q 038818 277 PEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALK 356 (486)
Q Consensus 277 ~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~ 356 (486)
.. +. -++|+|+.|+||.+.+..+||++.++.+.. ...+.....+.....- -.+.|+.+. ++
T Consensus 203 s~-ke-----~g~DFiVgSGHKsmAAs~PiGvl~~~eE~a-e~V~r~Sg~~~~~KEv----------ellGCT~rG--ap 263 (382)
T COG1103 203 SG-KE-----IGADFIVGSGHKSMAASAPIGVLAMSEEWA-EIVLRRSGRAFPKKEV----------ELLGCTVRG--AP 263 (382)
T ss_pred cc-cc-----cCCCEEEecCccchhccCCeeEEeehhHHH-HHHHhhccccccccee----------eeecccccC--ch
Confidence 32 22 289999999999999999999999987632 2233333222111110 134565433 33
Q ss_pred HHHHHHHhc--hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC-C-CeeEEEEEeecCCCCCCCCCCccchHHHHH---
Q 038818 357 LWLVLRSFG--VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP-R-NFAVVCFRVLPSASGLGDGKANEGANELNR--- 429 (486)
Q Consensus 357 ~~~~l~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~-~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~--- 429 (486)
+...++.+- .+.. ...+...+.+++|.+.|+++.|++.++. | +.-.+-|..+.. +++.+
T Consensus 264 ivTlmASfP~V~eRV-krWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f-------------~eIakk~~ 329 (382)
T COG1103 264 IVTLMASFPHVVERV-KRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVF-------------HEIAKKHK 329 (382)
T ss_pred HHHHHhcCHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchH-------------HHHHHhCc
Confidence 333333321 2333 3456677899999999999988887763 2 333444433221 22222
Q ss_pred ----HHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 430 ----KLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 430 ----~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
.|++.|.++|+..+.++ -..++++|+ +..+.|+++.+++++++++++
T Consensus 330 r~gyFlY~ELK~RgI~GI~~G---~Tk~~K~sv--yGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 330 RKGYFLYEELKKRGIHGIQPG---QTKYFKLSV--YGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred CCceeeHHHHHhcCccccccC---ceeEEEEEe--ecCCHHHHHHHHHHHHHHHHh
Confidence 35566777776544442 245788887 678889999999999999875
No 79
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.88 E-value=1.7e-20 Score=189.51 Aligned_cols=308 Identities=11% Similarity=0.066 Sum_probs=195.3
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH-HH
Q 038818 108 SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA-LQ 186 (486)
Q Consensus 108 ~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-~~ 186 (486)
.|...++|+.+.+.+++++|.+. ..+++++|+.||+.++.+... +++.|+++...|.+ +.
T Consensus 69 ~~~~~~lE~~~~~~la~l~g~~~--------alv~~~SG~~A~~~~l~al~~-----------~GD~Vl~~~~~~~~~~~ 129 (416)
T PRK13034 69 CEFVDEVEALAIERAKQLFGCDY--------ANVQPHSGSQANGAVYLALLK-----------PGDTILGMSLSHGGHLT 129 (416)
T ss_pred ChHHHHHHHHHHHHHHHHhCCCc--------eEEecCCcHHHHHHHHHHhcC-----------CCCEEEEcCccceeeee
Confidence 46677888877789999999864 235578999999888776533 78889999999987 33
Q ss_pred HHHHHcCCCCCCe--EEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEE
Q 038818 187 KAAQIAGIDPKNF--RAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVH 264 (486)
Q Consensus 187 ~a~~~~G~g~~~v--~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lh 264 (486)
.+++....+. .+ +.++++.. ++.+|+++|++.++.. .|.+|+.+. +.+|...|+++|.++|++||++++
T Consensus 130 ~g~~~~~~~~-~~~~~~~~~~~~-~~~~d~~~le~~l~~~-----~~klVi~~~--~~~g~~~dl~~l~~la~~~g~~li 200 (416)
T PRK13034 130 HGAKVSLSGK-WYNAVQYGVDRL-TGLIDYDEVEELAKEH-----KPKLIIAGF--SAYPRELDFARFREIADEVGALLM 200 (416)
T ss_pred cCCcceeccc-eeeeEEcccccc-cCCcCHHHHHHHHhhc-----CCeEEEECC--CccccccCHHHHHHHHHHcCCEEE
Confidence 3333211110 22 34555432 4579999999988642 144555433 346888899999999999999999
Q ss_pred eeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCc
Q 038818 265 VDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDW 344 (486)
Q Consensus 265 vD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 344 (486)
||+||+.+....+... ..+..+|.+++++||++.+|.| |+++.+++........ +++..
T Consensus 201 vD~Aha~G~~~~g~~~---~~~~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~~~~~~~----~~~~~------------- 259 (416)
T PRK13034 201 VDMAHIAGLVAAGEHP---NPFPHAHVVTTTTHKTLRGPRG-GMILTNDEEIAKKINS----AVFPG------------- 259 (416)
T ss_pred EeCcccccCcccCCCC---CCCCCceEEEEeCcccCCCCCC-eEEEECcHHHHHHHHh----hcCCc-------------
Confidence 9999987765443211 1234699999999999988875 5555655543221111 11110
Q ss_pred cccCCCCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC-CCeeEEEEEeecCCCCCCCCCCcc
Q 038818 345 QITLSRRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP-RNFAVVCFRVLPSASGLGDGKANE 422 (486)
Q Consensus 345 ~~~~sr~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~ 422 (486)
++.+..+ ...++..++...-..+..++.++..+++++|++.|.+. |+++..+ .+++++.+.+....
T Consensus 260 -~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~~~~~t~i~~v~~~~~~---------- 327 (416)
T PRK13034 260 -LQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GYDLVSGGTDNHLLLVDLRPKG---------- 327 (416)
T ss_pred -ccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCCCCCcEEEEEcCCCC----------
Confidence 0111111 11122222222211234466789999999999999988 8998743 46677777665431
Q ss_pred chHHHHHHHHHHHHhcCcEEEeee------eECCEeEEEEEecCC----CCcHHHHHHHHHHHHHHHH
Q 038818 423 GANELNRKLLESINASGQLYVSHG------MVAGIYFIRFAVGAT----LTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 423 ~~~~~~~~l~~~l~~~g~~~~~~~------~~~~~~~lR~~~~~~----~tt~~did~~i~~l~~~~~ 480 (486)
.....+.+.|.+.|+.+..-. .......+|+++. . ..+++||++++++|.+++.
T Consensus 328 ---~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~-~~t~~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 328 ---LSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTP-AGTTRGFGEAEFREIANWILDVLD 391 (416)
T ss_pred ---CCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcH-HHHhCCCCHHHHHHHHHHHHHHHh
Confidence 112344456667787432200 0011456999973 4 5568899999999998765
No 80
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.88 E-value=3e-20 Score=174.72 Aligned_cols=333 Identities=14% Similarity=0.087 Sum_probs=231.5
Q ss_pred HHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcc
Q 038818 87 AGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIG 166 (486)
Q Consensus 87 ~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 166 (486)
|..+.+.+..........|. -...++-+.+.+|.++..++.... .+.++++| .+.++..+.+.+.+
T Consensus 40 pp~i~~Al~~rvdhGvfGY~--~~~~~~~~ai~~w~~~r~~~~i~~-----e~i~~~p~----VVpgi~~~I~~~T~--- 105 (388)
T COG1168 40 PPEIIEALRERVDHGVFGYP--YGSDELYAAIAHWFKQRHQWEIKP-----EWIVFVPG----VVPGISLAIRALTK--- 105 (388)
T ss_pred CHHHHHHHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHhcCCCCCc-----ceEEEcCc----chHhHHHHHHHhCc---
Confidence 44567777777777666776 334568889999999999986531 25677766 45566666555433
Q ss_pred ccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCC-CCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 167 RENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTK-SSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 167 ~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~-~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
+++-|++..+.++.+.++....|. +++..|.-. ++.+.||.++||+++.+.. +.+.+.+.|+||+|.
T Consensus 106 ----~gd~Vvi~tPvY~PF~~~i~~n~R---~~i~~pL~~~~~~y~iD~~~LE~~~~~~~-----vkl~iLCnPHNP~Gr 173 (388)
T COG1168 106 ----PGDGVVIQTPVYPPFYNAIKLNGR---KVIENPLVEDDGRYEIDFDALEKAFVDER-----VKLFILCNPHNPTGR 173 (388)
T ss_pred ----CCCeeEecCCCchHHHHHHhhcCc---EEEeccccccCCcEEecHHHHHHHHhcCC-----ccEEEEeCCCCCCCc
Confidence 566677787899999999999999 999999863 4568899999999998753 347899999999998
Q ss_pred c---CCchHHHHHHHHhCceEEeeccccchhccCccchhhhc-CCCCCC-cee-eccccccCCC-CcceEEEeeCchHHH
Q 038818 246 V---DPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFID-GIEGAD-SFS-LNAHKWFFTT-LDCCCLWVKNPNALI 318 (486)
Q Consensus 246 i---dpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~-~~~~aD-si~-~~~hK~l~~p-~~~g~~~~~~~~~~~ 318 (486)
+ +.|.+|++||++||+.++.|..|+-..+....+-.... ....+| +++ .++.|.|+.+ ..|+.+++.+++...
T Consensus 174 vwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~ 253 (388)
T COG1168 174 VWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRA 253 (388)
T ss_pred cccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHH
Confidence 8 78999999999999999999999765543322211110 111233 454 4569999944 578999998886533
Q ss_pred HHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHH--hchHHHHHHHHHHHHHHHHHHHHHhC-CCCeEE
Q 038818 319 KALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRS--FGVANLRNFLRSHVRMAQLFQELVGG-DNRFEI 395 (486)
Q Consensus 319 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~--~g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~ 395 (486)
+..+.. ..... -..+++++-+...+ .|.+++.++++....+.+++.+.|++ +|++++
T Consensus 254 ~~~~~l-~~~~~-------------------~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v 313 (388)
T COG1168 254 KFLKRL-KRNGL-------------------HGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKV 313 (388)
T ss_pred HHHHHH-HHhcC-------------------CCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEE
Confidence 222111 01110 01244554444444 48999999999999999999999976 689999
Q ss_pred ecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeE---CCEeEEEEEecCCCCcHHHHHHHH
Q 038818 396 VAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMV---AGIYFIRFAVGATLTEDRHVIAAW 472 (486)
Q Consensus 396 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~~~~~lR~~~~~~~tt~~did~~i 472 (486)
..+..+......+.+-.. ...++.+.|.++..+.++++.. .|.+++|+.+ .+.++-+++.+
T Consensus 314 ~~p~gTYL~WLD~r~l~l-------------~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~---acpr~~L~eal 377 (388)
T COG1168 314 TEPQGTYLAWLDCRELGL-------------DDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNF---ACPRAILEEAL 377 (388)
T ss_pred ecCCCceeeeeeccccCC-------------ChHHHHHHHHHhhcEeccCCCccCcCCCceEEEec---CCCHHHHHHHH
Confidence 866666666555554321 1135666666667766665543 3578999876 55666778888
Q ss_pred HHHHHHHHH
Q 038818 473 KVVQEKLDG 481 (486)
Q Consensus 473 ~~l~~~~~~ 481 (486)
+.|...++.
T Consensus 378 ~ri~~al~~ 386 (388)
T COG1168 378 ERLKRALKK 386 (388)
T ss_pred HHHHHHHhc
Confidence 887776654
No 81
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.88 E-value=8.4e-20 Score=184.75 Aligned_cols=304 Identities=12% Similarity=0.062 Sum_probs=197.5
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHH
Q 038818 110 AATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAA 189 (486)
Q Consensus 110 ~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~ 189 (486)
+...+..++.+++++++|.+. ..++|+ |++++..++.+... +++.|++++.+|+++..++
T Consensus 84 G~~~l~~~l~~~la~~~g~~~--------~i~~ts-G~~a~~~~~~~l~~-----------~gd~vi~~~~~~~~~~~~~ 143 (397)
T PRK06939 84 GTQDLHKELEEKLAKFLGTED--------AILYSS-CFDANGGLFETLLG-----------KEDAIISDALNHASIIDGV 143 (397)
T ss_pred CCcHHHHHHHHHHHHHhCCCc--------EEEEcC-hHHHHHHHHHHhCC-----------CCCEEEEEhhhhHHHHHHH
Confidence 345677888899999999652 345555 48888766554322 6778889999999999999
Q ss_pred HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccc
Q 038818 190 QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 190 ~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
...|. +++.++. +|+++|++++++....+..+.+|+.....+++|.+.|+++|.++|++||+|+++|++|
T Consensus 144 ~~~~~---~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~ 213 (397)
T PRK06939 144 RLCKA---KRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSH 213 (397)
T ss_pred HhcCC---ceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcc
Confidence 99988 7777653 4899999998764332234566776667888999999999999999999999999999
Q ss_pred cchhccCc-cchhhhcCC-CCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCcccc
Q 038818 270 AGSACICP-EFRHFIDGI-EGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQIT 347 (486)
Q Consensus 270 g~~~~~~~-~~~~~~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 347 (486)
+.++.... .......++ ...|.++.++||+++++ .+|+++.++ ...........++.. .
T Consensus 214 ~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~-r~G~v~~~~-~~~~~l~~~~~~~~~-----------------~ 274 (397)
T PRK06939 214 AVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGA-SGGYTAGRK-EVIDWLRQRSRPYLF-----------------S 274 (397)
T ss_pred cccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCcc-CceEEEeCH-HHHHHHHHhCccccc-----------------c
Confidence 63332111 101111122 35788999999999655 457776653 333322111111111 1
Q ss_pred CCCCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHH
Q 038818 348 LSRRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANE 426 (486)
Q Consensus 348 ~sr~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~ 426 (486)
++... ...++..+++.+. ...++.++..++++++.+.|+++ ++++. ++..+++.+.+.+ ..
T Consensus 275 ~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~--------------~~ 336 (397)
T PRK06939 275 NSLAPAIVAASIKVLELLE--ESDELRDRLWENARYFREGMTAA-GFTLG-PGEHPIIPVMLGD--------------AK 336 (397)
T ss_pred CCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEECC--------------HH
Confidence 11010 1122233344331 22466778888999999999887 66654 3444454444321 12
Q ss_pred HHHHHHHHHHhcCcEEEeeeeE----CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 427 LNRKLLESINASGQLYVSHGMV----AGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 427 ~~~~l~~~l~~~g~~~~~~~~~----~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
...++.+.|.++|+.+. +..+ .+..++|+++. ...++++|+++++.|+++++++
T Consensus 337 ~~~~~~~~L~~~gI~v~-~~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 337 LAQEFADRLLEEGVYVI-GFSFPVVPKGQARIRTQMS-AAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred HHHHHHHHHHHCCceEe-eeCCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 24567778888887544 3222 23468999984 4467889999999999988764
No 82
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.88 E-value=1.2e-20 Score=187.63 Aligned_cols=307 Identities=16% Similarity=0.143 Sum_probs=196.0
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHH
Q 038818 106 MSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSAL 185 (486)
Q Consensus 106 ~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 185 (486)
..++...++| +.+++++|.+ ..+++++||+|+..++.+.+.. ++..|+++..+|.+.
T Consensus 15 ~~~~~~~~~~----~~la~~~~~~---------~~~~~~sgt~al~~~l~~l~~~----------~gd~vl~~~~~~~~~ 71 (352)
T cd00616 15 TLGPKVREFE----KAFAEYLGVK---------YAVAVSSGTAALHLALRALGIG----------PGDEVIVPSFTFVAT 71 (352)
T ss_pred cCCHHHHHHH----HHHHHHhCCC---------eEEEECCHHHHHHHHHHHcCCC----------CCCEEEeCCcchHHH
Confidence 3345445555 4577777753 4688899999998887765311 567889999999999
Q ss_pred HHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEe
Q 038818 186 QKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHV 265 (486)
Q Consensus 186 ~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhv 265 (486)
..++...|+ +++.+++++ .++.+|+++|+++++++ +.+|+++ +++|.+.|+++|.++|+++|+++++
T Consensus 72 ~~~~~~~g~---~~~~~~~~~-~~~~~d~~~l~~~i~~~------~~~v~~~---~~~G~~~~~~~i~~l~~~~~i~li~ 138 (352)
T cd00616 72 ANAILLLGA---TPVFVDIDP-DTYNIDPELIEAAITPR------TKAIIPV---HLYGNPADMDAIMAIAKRHGLPVIE 138 (352)
T ss_pred HHHHHHcCC---eEEEEecCC-CcCCcCHHHHHHhcCcC------CeEEEEE---CCCCCcCCHHHHHHHHHHcCCeEEE
Confidence 999999999 999999975 35799999999988543 2355555 3589999999999999999999999
Q ss_pred eccccchhccCccchhhhcCCCCCCceeec--cccccCCCCcceEEEeeCchHHHHHhcC-CcccccCccCCCCCccCCC
Q 038818 266 DAAYAGSACICPEFRHFIDGIEGADSFSLN--AHKWFFTTLDCCCLWVKNPNALIKALST-NPEFLRNKASDSKQVVDYK 342 (486)
Q Consensus 266 D~a~g~~~~~~~~~~~~~~~~~~aDsi~~~--~hK~l~~p~~~g~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~ 342 (486)
|++|+.+...... . +. ...|..+++ .|||+.++ ..|++++++++...+.... ...+.... ..+.
T Consensus 139 D~a~~~g~~~~~~--~-~~--~~~d~~~~S~~~~K~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 205 (352)
T cd00616 139 DAAQALGATYKGR--K-VG--TFGDAGAFSFHPTKNLTTG-EGGAVVTNDEELAERARLLRNHGRDRDR-------FKYE 205 (352)
T ss_pred ECCCCCCCeECCE--E-cc--cCcceeEEcCCCCCCCccc-CceEEEECCHHHHHHHHHHHHcCCCCCC-------Cccc
Confidence 9999755433211 0 11 124555555 56999544 3566777765544322110 00000000 0000
Q ss_pred CccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC-----CeeEEEEEeecCCCCCCC
Q 038818 343 DWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR-----NFAVVCFRVLPSASGLGD 417 (486)
Q Consensus 343 ~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----~~~~v~f~~~~~~~~~~~ 417 (486)
.......-+...+.....+. ..+++.++.++..++++++++.|+++++++++.++ ...+++|.+.+..
T Consensus 206 ~~~~~~~~~~~~~~aa~~~~--~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----- 278 (352)
T cd00616 206 HEILGYNYRLSEIQAAIGLA--QLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEA----- 278 (352)
T ss_pred cceeeeccCcCHHHHHHHHH--HHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcC-----
Confidence 00111111222333333332 34667888889999999999999999999987543 2356777765310
Q ss_pred CCCccchHHHHHHHHHHHHhcCcEEE---eeeeEC--------------------CEeEEEEEecCCCCcHHHHHHHHHH
Q 038818 418 GKANEGANELNRKLLESINASGQLYV---SHGMVA--------------------GIYFIRFAVGATLTEDRHVIAAWKV 474 (486)
Q Consensus 418 ~~~~~~~~~~~~~l~~~l~~~g~~~~---~~~~~~--------------------~~~~lR~~~~~~~tt~~did~~i~~ 474 (486)
.....++.+.|.++|+... .+.... ....+|+++ ++.+|++||++++++
T Consensus 279 -------~~~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~-~~~~t~~di~~i~~~ 350 (352)
T cd00616 279 -------GESRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPL-HPSLTEEEIDRVIEA 350 (352)
T ss_pred -------CCCHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccC-CCCCCHHHHHHHHHH
Confidence 0113356666666776311 111000 025799998 678899999999998
Q ss_pred HH
Q 038818 475 VQ 476 (486)
Q Consensus 475 l~ 476 (486)
|+
T Consensus 351 l~ 352 (352)
T cd00616 351 LR 352 (352)
T ss_pred hC
Confidence 74
No 83
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.88 E-value=3.6e-21 Score=190.59 Aligned_cols=336 Identities=14% Similarity=0.033 Sum_probs=212.6
Q ss_pred ecCCCCCHHHHHHHHHHhhc----CCCcccc---ccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEc-CCchHHH
Q 038818 79 YFPSSGSIAGFLGEMLSSGF----NVVGFNW---MSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQ-GTTCEAI 150 (486)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~----n~~~~~~---~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t-~ggt~a~ 150 (486)
+.|++...|..+.+.+...+ +.....+ ..++.+.++-+++++.+++++|.++++ ..+++ ++||.++
T Consensus 7 ~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~------~v~~~~gsgt~~~ 80 (360)
T PRK05355 7 FSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNY------KVLFLQGGASLQF 80 (360)
T ss_pred ccCCCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc------EEEEEcCCchHHH
Confidence 55677666666655555443 1222222 234556688899999999999985442 45555 5555545
Q ss_pred HHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHH-HHHHHHHCCC
Q 038818 151 LCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQA-AIDLDIQAGL 229 (486)
Q Consensus 151 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~-~l~~~~~~g~ 229 (486)
-.++...... +.+..+|..+...|.+ .+.++.+|. . ..++.++ +.+..+..++++ +|+++
T Consensus 81 Ea~~~nl~~~--------g~~~l~i~~G~fg~r~-~~~a~~~g~---~-~~~~~~~-~~g~~~~~~~~~~~l~~~----- 141 (360)
T PRK05355 81 AMVPMNLLGG--------GKKADYVDTGSWSKKA-IKEAKKYGE---V-NVAASSE-DDGFTYIPPLDEWQLSDD----- 141 (360)
T ss_pred HHHHHhcCCC--------CCeEEEEECCHHHHHH-HHHHHHhCC---c-eEEeccc-ccCCCCCCChhhccCCCC-----
Confidence 4444433221 1133445445445544 667777886 5 5555543 133555555555 55442
Q ss_pred ccEEEEeecCCccccccC-CchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceE
Q 038818 230 IPLFLCATVGTTAITTVD-PLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCC 308 (486)
Q Consensus 230 ~p~~vv~~~gtt~~G~id-pl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~ 308 (486)
+.+|.+++..|.||.+. ||++| +|+.++||++++.+....+- ...|.+++++||+++ |.|.|+
T Consensus 142 -~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv--------~~~d~~~~ssqK~lg-P~Glg~ 205 (360)
T PRK05355 142 -AAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDV--------SKFGLIYAGAQKNIG-PAGLTI 205 (360)
T ss_pred -CCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCccCCH--------HHccEEEEecccccc-CCceEE
Confidence 45899999999999997 78777 89999999999877665432 245799999999986 999999
Q ss_pred EEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC-CCchHHHHHHHHhchH-HHHHHHHHHHHHHHHHHHH
Q 038818 309 LWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR-FRALKLWLVLRSFGVA-NLRNFLRSHVRMAQLFQEL 386 (486)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~ 386 (486)
++++++.+- +.-...+.|+..... .... ....+-. ....++..+++.+-.+ |++++.++..++++++++.
T Consensus 206 l~~s~~~l~-~~~~~~~~~~~~~~~---~~~~----~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~ 277 (360)
T PRK05355 206 VIVREDLLG-RALPSIPSMLDYKTH---ADND----SMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDA 277 (360)
T ss_pred EEECHHHHh-hcccCCChHHHHHHH---HhcC----CccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHH
Confidence 999987542 211111222211100 0000 0011111 1235667778877777 8999999999999999999
Q ss_pred HhCCCCeEEecC--CCe-eEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCC
Q 038818 387 VGGDNRFEIVAP--RNF-AVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLT 463 (486)
Q Consensus 387 L~~~~~~~~~~~--~~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~t 463 (486)
|++++.+..+.+ ..+ .+++|.+... ....++.+.+.++|+.+ .... ...+.+|+|++ +.+
T Consensus 278 l~~~~~~~~~~~~~~rs~~v~sf~~~~~--------------~~~~~~~~~~~~~Gi~~-~~~~-~~~g~vRiS~~-~~n 340 (360)
T PRK05355 278 IDSSDFYRNPVAPEDRSRMNVPFTLADE--------------ELDKKFLAEAKAAGLVG-LKGH-RSVGGMRASIY-NAM 340 (360)
T ss_pred HHhCCCcccCCChhhcCCcEEEEEcCCh--------------HHHHHHHHHHHHCCCcc-cCCC-CccCcEEEECC-CCC
Confidence 999863333222 234 4688886531 22345667777889864 3222 22468999995 577
Q ss_pred cHHHHHHHHHHHHHHHH
Q 038818 464 EDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 464 t~~did~~i~~l~~~~~ 480 (486)
|++|||+++++|++++.
T Consensus 341 t~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 341 PLEGVQALVDFMKEFER 357 (360)
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 88899999999999764
No 84
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.88 E-value=1.9e-20 Score=190.68 Aligned_cols=324 Identities=10% Similarity=0.061 Sum_probs=201.3
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEE-cCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecC------
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVI-QGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSD------ 179 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~-t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~------ 179 (486)
......++|..+.+...++|+.....+ ...+ +.+|+.||+.++.+... +++.|++.+
T Consensus 74 G~~~~d~lE~~~~~~~~~~f~~~~~~~-----~~nv~~~SG~~AN~av~~aL~~-----------pgD~Il~~d~~~gGh 137 (475)
T PLN03226 74 GNEYIDQIETLCQKRALEAFRLDPEKW-----GVNVQPLSGSPANFAVYTALLQ-----------PHDRIMGLDLPHGGH 137 (475)
T ss_pred CChhHHHHHHHHHHHHHHHhCCCccee-----EEecCcCchHHHHHHHHHHhCC-----------CCCEEEECCCCcCcc
Confidence 334567899988899999999876420 0111 37889999877776644 667777633
Q ss_pred CCchHHHHHHHHcCCCCC-CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHH
Q 038818 180 QTHSALQKAAQIAGIDPK-NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKR 258 (486)
Q Consensus 180 ~~H~s~~~a~~~~G~g~~-~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~ 258 (486)
..|.+...+++..+.+.. +++.+++++ +++.+|+++|++++.+. .|.+|++ +.+.+|..-|+++|+++|++
T Consensus 138 l~H~~~~~g~~~s~~~~~~~~~~y~~~~-~~g~iD~d~Le~~l~~~-----~pklIv~--~~S~~s~~~D~a~i~~ia~~ 209 (475)
T PLN03226 138 LSHGYQTDGKKISATSIYFESMPYRLDE-STGLIDYDKLEKKAMLF-----RPKLIIA--GASAYPRDWDYARMRKIADK 209 (475)
T ss_pred hhhhhhhcccccccceEEEEeeeeeecC-CCCCcCHHHHHHHHhhc-----CCeEEEE--ecCcCCCccCHHHHHHHHHH
Confidence 334443333333333100 111344554 35799999999998753 2444544 34557888999999999999
Q ss_pred hCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCc---ccccCccCCC
Q 038818 259 YSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNP---EFLRNKASDS 335 (486)
Q Consensus 259 ~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~---~y~~~~~~~~ 335 (486)
+|++++||+||+.+.+..+..... ++.+|+++.++||||.+|.| |+++++++.. ........ .|..
T Consensus 210 ~ga~LlvD~AH~~Gli~~~~~~~p---~~~~Div~~t~hK~L~GP~G-g~I~~~~~~~-~~~~~g~~~~~d~~~------ 278 (475)
T PLN03226 210 VGALLMCDMAHISGLVAAQEAASP---FEYCDVVTTTTHKSLRGPRG-GMIFFRKGPK-PPKGQGEGAVYDYED------ 278 (475)
T ss_pred cCCEEEEEchhhhCcccCCCCCCC---CCCCeEEEecCcccccCCCc-eEEEEchhhc-ccccCCCccHHHHHH------
Confidence 999999999998877655432211 24799999999999999998 7777765421 10000000 0100
Q ss_pred CCccCC-CCccccCCCC-CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC-CCeeEEEEEeecCC
Q 038818 336 KQVVDY-KDWQITLSRR-FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP-RNFAVVCFRVLPSA 412 (486)
Q Consensus 336 ~~~~~~-~~~~~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~ 412 (486)
..+. ..+.++++-. ....++..+++.+-..+++++.++..+++++|++.|.+. |++++.+ .+.+++.+.+.+..
T Consensus 279 --~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~-G~~l~~~~t~~hi~lv~~~~~g 355 (475)
T PLN03226 279 --KINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSK-GYKLVTGGTDNHLVLWDLRPLG 355 (475)
T ss_pred --HhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCCCCEEEEEccCCC
Confidence 0000 0011222211 123455666776656677888999999999999999985 9999864 23566666664432
Q ss_pred CCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeee-----ECCEeEEEEEe---cCCCCcHHHHHHHHHHHHHHHHH
Q 038818 413 SGLGDGKANEGANELNRKLLESINASGQLYVSHGM-----VAGIYFIRFAV---GATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-----~~~~~~lR~~~---~~~~tt~~did~~i~~l~~~~~~ 481 (486)
. ...++.+.|.+.|+..-.... ......+|+.. ++...+++|++++.+.|.++++.
T Consensus 356 i-------------~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 356 L-------------TGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred C-------------CHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 1 122344555566764321110 01234578732 45677889999999999998873
No 85
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.88 E-value=3e-21 Score=186.64 Aligned_cols=229 Identities=12% Similarity=0.053 Sum_probs=157.6
Q ss_pred HHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCC
Q 038818 115 ENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGI 194 (486)
Q Consensus 115 e~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~ 194 (486)
-+++.+.+++++|.+.. .++++|+|+++..++.+... +++.|+++..+|.|+..++...|+
T Consensus 61 i~~~~~~~A~~~ga~~~--------~~~~~Gst~a~~~~l~al~~-----------~gd~Vlv~~~~h~s~~~~~~~~g~ 121 (294)
T cd00615 61 IKEAQELAARAFGAKHT--------FFLVNGTSSSNKAVILAVCG-----------PGDKILIDRNCHKSVINGLVLSGA 121 (294)
T ss_pred HHHHHHHHHHHhCCCCE--------EEEcCcHHHHHHHHHHHcCC-----------CCCEEEEeCCchHHHHHHHHHCCC
Confidence 34566788999997642 35588989999877766543 677899999999999999999998
Q ss_pred CCCCeEEEecCCCCC----cccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeecccc
Q 038818 195 DPKNFRAIKTTKSSS----FTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYA 270 (486)
Q Consensus 195 g~~~v~~v~~d~~~~----~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g 270 (486)
+++.++.+.+++ +.+|++++++++++.. .+.+|+++.+ |++|.+.|+++|+++|+++|++++||+||+
T Consensus 122 ---~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~----~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~ 193 (294)
T cd00615 122 ---VPVYLKPERNPYYGIAGGIPPETFKKALIEHP----DAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHG 193 (294)
T ss_pred ---EEEEecCccCcccCcCCCCCHHHHHHHHHhCC----CceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcch
Confidence 899988764332 4799999999997532 2456777776 679999999999999999999999999998
Q ss_pred chhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCC
Q 038818 271 GSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSR 350 (486)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr 350 (486)
+.+.+.+..+.... ..++|.++.++||+++++.++|+++++++......+.... +.... .+.
T Consensus 194 ~~~~~~~~~~~~~~-~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~~-~~~~t----------------tsp 255 (294)
T cd00615 194 AHFRFHPILPSSAA-MAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVNEAL-NLHQS----------------TSP 255 (294)
T ss_pred hhhccCcccCcchh-hcCCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHHHHH-HHHCC----------------CCc
Confidence 76544433222111 1379999999999998888888888876521111111000 01100 010
Q ss_pred CC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhC
Q 038818 351 RF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGG 389 (486)
Q Consensus 351 ~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~ 389 (486)
.. ...++-.+++.+..+| .+.+++..+++++++++|++
T Consensus 256 s~~~~asl~~a~~~~~~~g-~~~~~~~~~~~~~~r~~l~~ 294 (294)
T cd00615 256 SYLILASLDVARAMMALEG-KELVEELIELALYARQEINK 294 (294)
T ss_pred HHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHhC
Confidence 11 1122333344343344 44678888899999988753
No 86
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.88 E-value=6.5e-20 Score=185.60 Aligned_cols=340 Identities=14% Similarity=0.104 Sum_probs=207.5
Q ss_pred CCCCCCcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHH
Q 038818 70 HWQSPYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEA 149 (486)
Q Consensus 70 ~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a 149 (486)
.+.+-.|+|.-.. +.....+.+.+..+.......... ........++.+.+++++|.+ ..+++++|++|
T Consensus 49 ~~~sn~ylgl~~~-p~v~~a~~~~~~~~~~~~~~s~~~-~g~~~~~~~Le~~la~~~g~~---------~~l~~~sG~~a 117 (402)
T TIGR01821 49 VWCSNDYLGMGQH-PEVLQAMHETLDKYGAGAGGTRNI-SGTNIPHVELEAELADLHGKE---------SALVFTSGYVA 117 (402)
T ss_pred EeEccCcCCCCCC-HHHHHHHHHHHHHcCCCCcchhhh-hCCcHHHHHHHHHHHHHhCCC---------eEEEECchHHH
Confidence 3556678887543 223333334443321111111000 011333445667788888853 35777888999
Q ss_pred HHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCC
Q 038818 150 ILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGL 229 (486)
Q Consensus 150 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~ 229 (486)
|..++.+++... ++.+|+++...|.++..++...|. .+..++. .|+++|++.++... ..
T Consensus 118 n~~ai~~l~~~~---------~~~~v~~~~~~h~s~~~~~~~~g~---~~~~~~~-------~d~~~l~~~l~~~~--~~ 176 (402)
T TIGR01821 118 NDATLATLAKII---------PGCVIFSDELNHASMIEGIRHSGA---EKFIFRH-------NDVAHLEKLLQSVD--PN 176 (402)
T ss_pred HHHHHHHhhCCC---------CCCEEEEcchHhHHHHHHHHHcCC---eEEEECC-------CCHHHHHHHHHhcc--CC
Confidence 998887765320 456777777789999888888887 6666543 37888998886431 11
Q ss_pred ccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhh--hcCC-CCCCceeeccccccCCCCcc
Q 038818 230 IPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHF--IDGI-EGADSFSLNAHKWFFTTLDC 306 (486)
Q Consensus 230 ~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~--~~~~-~~aDsi~~~~hK~l~~p~~~ 306 (486)
.+.+|+++.+.+++|.+.|+++|+++|++||++++||+||+.+.+ .+..... ..++ ...|.+..++.|.++.+.
T Consensus 177 ~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~-g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G-- 253 (402)
T TIGR01821 177 RPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLY-GPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG-- 253 (402)
T ss_pred CCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCccccccc-CCCCCccchhccCCCCCeEEEEechhhhccCC--
Confidence 356788999999999999999999999999999999999974432 1211111 1122 246888889999998643
Q ss_pred eEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC-CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Q 038818 307 CCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR-FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQE 385 (486)
Q Consensus 307 g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~ 385 (486)
|+++.+ ++..........+|.+. .+.. ....++..+++.+... .++.++..++++++.+
T Consensus 254 G~i~~~-~~~~~~l~~~~~~~~~t-----------------~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~ 313 (402)
T TIGR01821 254 GYIAAS-RKLIDAIRSYAPGFIFT-----------------TSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKN 313 (402)
T ss_pred ceeecC-HHHHHHHHHhCcCceec-----------------CcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHH
Confidence 554443 33332211111222211 1111 1112223344433212 3445566789999999
Q ss_pred HHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHh-cCcEEEeee----eECCEeEEEEEecC
Q 038818 386 LVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINA-SGQLYVSHG----MVAGIYFIRFAVGA 460 (486)
Q Consensus 386 ~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~----~~~~~~~lR~~~~~ 460 (486)
.|+++ +++++ ++..+++.+.+.. ......+.++|.+ .|+. +.+. ...+..++|++++
T Consensus 314 ~L~~~-g~~~~-~~~~~i~~i~~~~--------------~~~a~~~~~~L~~~~Gi~-v~~~~~p~~~~g~~~lRis~~- 375 (402)
T TIGR01821 314 LLEAL-GIPVI-PNPSHIVPVIIGD--------------AALCKKVSDLLLNKHGIY-VQPINYPTVPRGTERLRITPT- 375 (402)
T ss_pred HHHHc-CCCcC-CCCCCEEEEEeCC--------------HHHHHHHHHHHHhcCCEE-EEeECCCCCCCCCceEEEEeC-
Confidence 99887 77765 3456677665432 1234567777765 4764 4332 2234568999995
Q ss_pred CCCcHHHHHHHHHHHHHHHHHH
Q 038818 461 TLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 461 ~~tt~~did~~i~~l~~~~~~l 482 (486)
...|++|||+++++|+++.+++
T Consensus 376 ~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 376 PAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred CCCCHHHHHHHHHHHHHHHHHc
Confidence 5677889999999999988764
No 87
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.87 E-value=1.3e-19 Score=181.19 Aligned_cols=307 Identities=12% Similarity=0.045 Sum_probs=200.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHH--HHHccccC-CCCeEEEecCCCchHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQI--LNEIGREN-ISRLVVYGSDQTHSALQKA 188 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~--~~~~~~~~-~~~~~v~~s~~~H~s~~~a 188 (486)
..+..++.+.|++++|.+. .+++++|..||+.++.+..... +...+... .+++.|+.....|.|+..+
T Consensus 146 ~~~h~~LE~~LA~f~g~e~---------all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG 216 (476)
T PLN02955 146 TTYHRLLESSLADLKKKED---------CLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDG 216 (476)
T ss_pred hHHHHHHHHHHHHHHCCCc---------EEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHH
Confidence 4455566678899998764 5888899999987776642110 00000000 1466888999999999999
Q ss_pred HHHcCC-CCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeec
Q 038818 189 AQIAGI-DPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDA 267 (486)
Q Consensus 189 ~~~~G~-g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~ 267 (486)
+++... +..+++.++ +.|+++|+++|+.... ...+|++....++.|.+-|+++|.++|++||++|+||.
T Consensus 217 ~~ls~~~~~a~~~~f~-------HND~~~Le~~L~~~~~---~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDE 286 (476)
T PLN02955 217 VRLAERQGNVEVFVYR-------HCDMYHLNSLLSSCKM---KRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDD 286 (476)
T ss_pred HHhccccCCceEEEeC-------CCCHHHHHHHHHhCCC---CceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcc
Confidence 998732 111666666 4499999999976532 23467888889999999999999999999999999999
Q ss_pred cccchhccCccchhhhc--CC-CCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCc
Q 038818 268 AYAGSACICPEFRHFID--GI-EGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDW 344 (486)
Q Consensus 268 a~g~~~~~~~~~~~~~~--~~-~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 344 (486)
||+.+.+. +..+.... ++ ...|.++.+..|.++.. .|+++.++ ............|++....
T Consensus 287 AH~~Gv~G-~~G~G~~e~~g~~~di~ii~~TLsKA~G~~--GGfi~gs~-~~~~~l~~~~~~~ifStal----------- 351 (476)
T PLN02955 287 AHGTFVCG-ENGGGVAEEFNCEADVDLCVGTLSKAAGCH--GGFIACSK-KWKQLIQSRGRSFIFSTAI----------- 351 (476)
T ss_pred cccCceec-CCCCcHHHHhCCCCCCcEEEEeCccchhcc--CceeecHH-HHHHHHHHhCCCCeecccc-----------
Confidence 99866542 22222211 22 46889999999998754 45555544 3332222234445543210
Q ss_pred cccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccch
Q 038818 345 QITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGA 424 (486)
Q Consensus 345 ~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~ 424 (486)
....+.+...++..+-.+ ....++..++.++|++.+ ++.+ .++++.+.+..
T Consensus 352 -----pp~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~~----G~~~----~sPI~pI~ig~-------------- 402 (476)
T PLN02955 352 -----PVPMAAAAYAAVVVARKE--KWRRKAIWERVKEFKALS----GVDI----SSPIISLVVGN-------------- 402 (476)
T ss_pred -----cHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhc----CCCC----CCCEEEEEeCC--------------
Confidence 001112222333333111 245677888888888842 4432 36788777754
Q ss_pred HHHHHHHHHHHHhcCcEE---EeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 425 NELNRKLLESINASGQLY---VSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 425 ~~~~~~l~~~l~~~g~~~---~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
+.....+.++|.++|+.+ ..|++..+...+|++++. ..|++||++++++|.++.+.+
T Consensus 403 ~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA-~Ht~edId~lv~~L~~~~~~~ 462 (476)
T PLN02955 403 QEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSA-AHTTEDVKKLITALSSCLDFD 462 (476)
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCC-CCCHHHHHHHHHHHHHHHhhh
Confidence 344567788888999842 234455677889999964 666679999999999887543
No 88
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.87 E-value=1.9e-20 Score=190.50 Aligned_cols=306 Identities=11% Similarity=0.056 Sum_probs=192.6
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH-
Q 038818 109 PAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK- 187 (486)
Q Consensus 109 ~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~- 187 (486)
+....+|+.+++++++++|.+.. . +++++||+|+..++.+... +++.|+++..+|.++..
T Consensus 67 ~~~~~~e~~~~~~la~~~g~~~~-------~-i~~~sgt~al~~~l~~l~~-----------~gd~Vl~~~~~~~~~~~~ 127 (416)
T PRK00011 67 EYVDVVEQLAIDRAKELFGAEYA-------N-VQPHSGSQANAAVYFALLK-----------PGDTILGMDLAHGGHLTH 127 (416)
T ss_pred hHHHHHHHHHHHHHHHHhCCCce-------e-eecCCchHHHHHHHHHhcC-----------CCCEEEEeccccCCcccc
Confidence 44567787788899999998753 3 4445678888766655432 66778888888865321
Q ss_pred --HH--HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceE
Q 038818 188 --AA--QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWV 263 (486)
Q Consensus 188 --a~--~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~l 263 (486)
.. ...|+ +++.+++++ +++.+|+++|++++++.. +.+|+++. +.+|...|+++|+++|+++|+++
T Consensus 128 ~~~~~~~~~g~---~~~~~~~~~-~~~~~d~~~l~~~i~~~~-----~k~v~~~~--~~~~~~~~~~~I~~la~~~~~~l 196 (416)
T PRK00011 128 GSPVNFSGKLY---NVVSYGVDE-ETGLIDYDEVEKLALEHK-----PKLIIAGA--SAYSRPIDFKRFREIADEVGAYL 196 (416)
T ss_pred cccccccccee---eEeecCcCc-ccCCcCHHHHHHHHHhcC-----CCEEEECC--CcCCCccCHHHHHHHHHHcCCEE
Confidence 11 22344 777888864 247999999999997521 23455442 45677789999999999999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCC
Q 038818 264 HVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKD 343 (486)
Q Consensus 264 hvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 343 (486)
++|+||+.+.......... +..+|.++.++||++.+|. +|+++.++++...+.......+...
T Consensus 197 ivD~a~~~g~~~~g~~~~~---~~~~di~~~S~~K~l~g~~-gg~i~~~~~~~~~~l~~~~~~~~~~------------- 259 (416)
T PRK00011 197 MVDMAHIAGLVAAGVHPSP---VPHADVVTTTTHKTLRGPR-GGLILTNDEELAKKINSAVFPGIQG------------- 259 (416)
T ss_pred EEECcchhcccccCccCCC---CCCCcEEEecCCcCCCCCC-ceEEEeCCHHHHHHHHHHhCccccC-------------
Confidence 9999986544322111111 2268999999999997765 4566665544433222111111100
Q ss_pred ccccCCCCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEec-CCCeeEEEEEeecCCCCCCCCCCc
Q 038818 344 WQITLSRRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVA-PRNFAVVCFRVLPSASGLGDGKAN 421 (486)
Q Consensus 344 ~~~~~sr~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~~~~~~ 421 (486)
+... ...++..++.....+++.+++++..++++++++.|++. ++++.. ....+++.+.+.+..
T Consensus 260 -----~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~i~~~~~~--------- 324 (416)
T PRK00011 260 -----GPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGGTDNHLVLVDLRSKG--------- 324 (416)
T ss_pred -----CccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecCCCCeEEEEeCcccC---------
Confidence 0001 11223334433345677889999999999999999987 788763 233466666664321
Q ss_pred cchHHHHHHHHHHHHhcCcEEEeee------eECCEeEEEEEecC---CCCcHHHHHHHHHHHHHHHH
Q 038818 422 EGANELNRKLLESINASGQLYVSHG------MVAGIYFIRFAVGA---TLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 422 ~~~~~~~~~l~~~l~~~g~~~~~~~------~~~~~~~lR~~~~~---~~tt~~did~~i~~l~~~~~ 480 (486)
.....+.+.|.+.|+.+-... .......+|++... ...+++|++++++.|++++.
T Consensus 325 ----~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~ 388 (416)
T PRK00011 325 ----LTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLD 388 (416)
T ss_pred ----CCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHh
Confidence 012346666767787532211 11123468986522 23468899999999998754
No 89
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.87 E-value=2.5e-19 Score=181.16 Aligned_cols=316 Identities=11% Similarity=0.093 Sum_probs=207.5
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCc
Q 038818 103 FNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTH 182 (486)
Q Consensus 103 ~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 182 (486)
..|....+..++.+.+.+|+++.+|.+... ....++|+|+++++..++.+..+ +++.|++...+|
T Consensus 72 ~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~----~~~I~it~Ga~~al~~~~~~l~~-----------~Gd~Vlv~~P~y 136 (405)
T PRK06207 72 QAYTEYRGDADIRELLAARLAAFTGAPVDA----ADELIITPGTQGALFLAVAATVA-----------RGDKVAIVQPDY 136 (405)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCCEEEeCCcHHHHHHHHHHhcC-----------CCCEEEEeCCCc
Confidence 356555567889999999999999964220 02689999999988776665543 677888898999
Q ss_pred hHHHHHHHHcCCCCCCeEEEecC---CCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHH
Q 038818 183 SALQKAAQIAGIDPKNFRAIKTT---KSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIA 256 (486)
Q Consensus 183 ~s~~~a~~~~G~g~~~v~~v~~d---~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~ 256 (486)
+.....++.+|. +++.||++ .++++.+|+++|++++++.+ .+|+++.++||||.+-+ +++|+++|
T Consensus 137 ~~~~~~~~~~g~---~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~------k~v~l~~P~NPTG~~~s~e~l~~l~~~a 207 (405)
T PRK06207 137 FANRKLVEFFEG---EMVPVQLDYLSADKRAGLDLDQLEEAFKAGV------RVFLFSNPNNPAGVVYSAEEIAQIAALA 207 (405)
T ss_pred hhHHHHHHHcCC---EEEEEeccccCcccCCCcCHHHHHHhhhhcC------eEEEECCCCCCCCcCCCHHHHHHHHHHH
Confidence 999999999999 99999986 22357899999999886543 36888999999999976 77889999
Q ss_pred HHhCceEEeeccccchhccCccchhhhcCCC-CCC--ceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCcc
Q 038818 257 KRYSIWVHVDAAYAGSACICPEFRHFIDGIE-GAD--SFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKA 332 (486)
Q Consensus 257 ~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~-~aD--si~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~ 332 (486)
++||+++++|.+|+........... +..+. ..| .+..++.|.++.| .-+|+++.. +....+..... .+...
T Consensus 208 ~~~~~~iI~De~Y~~~~~~~~~~~~-~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~-~~l~~~~~~~~-~~~~~-- 282 (405)
T PRK06207 208 RRYGATVIVDQLYSRLLYDGTSYTH-LRALPIDPENVITIMGPSKTESLSGYRLGVAFGS-PAIIDRMEKLQ-AIVSL-- 282 (405)
T ss_pred HHcCCEEEEeccccccccCCCCCCc-hhcCCCCcCcEEEEecchhhccCcccceEEEEcC-HHHHHHHHHHH-hHhcc--
Confidence 9999999999999764432111111 11111 112 4566789999844 458887654 33332221111 11000
Q ss_pred CCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCee-EEEEEee
Q 038818 333 SDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFA-VVCFRVL 409 (486)
Q Consensus 333 ~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~-~v~f~~~ 409 (486)
....+...+....+ +...+++.+++..+.++.+.+.|++++++++. +|..+ .+.+++.
T Consensus 283 ------------------~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~p~gg~fl~~~l~ 343 (405)
T PRK06207 283 ------------------RAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVR-APQAGSYLFPRLP 343 (405)
T ss_pred ------------------CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceec-CCCeeEEEEEeCc
Confidence 00111222222223 23446777788888888999999888778765 44444 4444443
Q ss_pred cCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 410 PSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
+.. . + ...+.+.+. +.|+.+..+..+. +.+++|+++.. +++++++.++.|.+++++.
T Consensus 344 ~~~---------~--~--~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~---~~~~l~~al~rl~~~l~~~ 403 (405)
T PRK06207 344 RLA---------V--S--LHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ---DHAAAVAAAERIAQLIERY 403 (405)
T ss_pred ccC---------C--C--HHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecC---CHHHHHHHHHHHHHHHHHh
Confidence 211 0 1 234566665 5687655544332 35799999963 4678999999998887664
No 90
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.87 E-value=5.1e-19 Score=182.71 Aligned_cols=338 Identities=14% Similarity=0.102 Sum_probs=214.4
Q ss_pred ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCC
Q 038818 102 GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQT 181 (486)
Q Consensus 102 ~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~ 181 (486)
...|....+..++.+.+.+|+.+..|.+.+ ..++++|+|+++++..++.+.... +++.|+++..+
T Consensus 108 ~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~-----~~~I~it~Ga~~al~~~~~~l~~~----------~gD~Vlv~~P~ 172 (481)
T PTZ00377 108 TGAYTDSAGYPFVRKAVAAFIERRDGVPKD-----PSDIFLTDGASSGIKLLLQLLIGD----------PSDGVMIPIPQ 172 (481)
T ss_pred ccCcCcccCCHHHHHHHHHHHHHhcCCCCC-----hhhEEEcCCHHHHHHHHHHHhccC----------CCCEEEECCCC
Confidence 345776667888999999999988786533 137899999999988777765411 67789999999
Q ss_pred chHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHHH
Q 038818 182 HSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAKR 258 (486)
Q Consensus 182 H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~~ 258 (486)
+......++..|. +++.+|++++++|.+|+++|++++++..+++..+.+|+++.++||||.+-+ +++|+++|++
T Consensus 173 y~~y~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~ 249 (481)
T PTZ00377 173 YPLYSAAITLLGG---KQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYE 249 (481)
T ss_pred chhHHHHHHHcCC---EEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHH
Confidence 9999999999999 999999986556799999999999875444445667777789999999977 8899999999
Q ss_pred hCceEEeeccccchhccC-ccc---hhhhcCCCC-----CCcee-ecccccc-C-CCCcceEEEee--CchHHHHHhcCC
Q 038818 259 YSIWVHVDAAYAGSACIC-PEF---RHFIDGIEG-----ADSFS-LNAHKWF-F-TTLDCCCLWVK--NPNALIKALSTN 324 (486)
Q Consensus 259 ~g~~lhvD~a~g~~~~~~-~~~---~~~~~~~~~-----aDsi~-~~~hK~l-~-~p~~~g~~~~~--~~~~~~~~~~~~ 324 (486)
||+|+++|.+|+...+.. ..+ .....++.. ...++ .+..|.+ + ...-+|++++. +++.........
T Consensus 250 ~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~ 329 (481)
T PTZ00377 250 KGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLA 329 (481)
T ss_pred CCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHh
Confidence 999999999997543311 111 111111111 11343 4689975 3 45678988762 444333221111
Q ss_pred cccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh-----chH-------HHHHHHHHHHHHHHHHHHHHhCCCC
Q 038818 325 PEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF-----GVA-------NLRNFLRSHVRMAQLFQELVGGDNR 392 (486)
Q Consensus 325 ~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~-----g~~-------g~~~~~~~~~~~a~~l~~~L~~~~~ 392 (486)
..++ + ...+...++...+ +.. ...+..++..+.++.+.+.|+++++
T Consensus 330 ~~~~-------------------~---~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g 387 (481)
T PTZ00377 330 SINL-------------------C---SNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEG 387 (481)
T ss_pred heec-------------------C---CChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 1010 0 1122223333322 111 1222223346777888999998888
Q ss_pred eEEecCCCeeEEEE-Eee-cCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeEC---CEeEEEEEecCCCCcHHH
Q 038818 393 FEIVAPRNFAVVCF-RVL-PSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVA---GIYFIRFAVGATLTEDRH 467 (486)
Q Consensus 393 ~~~~~~~~~~~v~f-~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---~~~~lR~~~~~~~tt~~d 467 (486)
+++. +|+.+.+.| ++. +....... ...........+...+.+.|+.++.+..+. +..++|+++. +++++
T Consensus 388 ~~~~-~p~gg~fl~~~~~l~~~~~~~~--~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~---~~~e~ 461 (481)
T PTZ00377 388 VSCQ-PVEGAMYAFPRIELPEKAIQEA--KERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL---PPEEQ 461 (481)
T ss_pred cEee-cCCeeEEEEeeccCchhhHHHH--HhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC---CCHHH
Confidence 8876 555555555 332 11000000 000000001122344556687666555443 3468999984 56779
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 038818 468 VIAAWKVVQEKLDGILAT 485 (486)
Q Consensus 468 id~~i~~l~~~~~~l~~~ 485 (486)
+++.++.|.+++++.+++
T Consensus 462 l~~~l~rl~~~~~~~~~~ 479 (481)
T PTZ00377 462 IEEMVKKIKEFHESFMKK 479 (481)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999998877653
No 91
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.87 E-value=1.4e-19 Score=183.56 Aligned_cols=296 Identities=13% Similarity=0.116 Sum_probs=190.9
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCC
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGID 195 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g 195 (486)
.++.+.+++++|.+. .+++++|++||..++...... .++.+|+++...|.++..+++..|.
T Consensus 94 ~~Le~~la~~~g~~~---------~i~~~sG~~a~~~~i~~l~~~---------~~g~~vi~~~~~h~s~~~~~~~~g~- 154 (410)
T PRK13392 94 VLLERELADLHGKES---------ALLFTSGYVSNDAALSTLGKL---------LPGCVILSDALNHASMIEGIRRSGA- 154 (410)
T ss_pred HHHHHHHHHHhCCCC---------EEEECcHHHHHHHHHHHHhcC---------CCCCEEEEehhhhHHHHHHHHHcCC-
Confidence 355677888888642 466667788988777643221 0456788888899999888888888
Q ss_pred CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhcc
Q 038818 196 PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACI 275 (486)
Q Consensus 196 ~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~ 275 (486)
++..++.+ |.+.+++.++... ...+.+|+++.++|++|.+-|+++|.++|++||+++++|+||+.+.+
T Consensus 155 --~~~~~~~~-------d~~~l~~~l~~~~--~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~- 222 (410)
T PRK13392 155 --EKQVFRHN-------DLADLEEQLASVD--PDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLY- 222 (410)
T ss_pred --eEEEEeCC-------CHHHHHHHHHhcc--CCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCc-
Confidence 77776532 5677777776432 12356899999999999999999999999999999999999984432
Q ss_pred Cccchhh--hcC-CCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC-
Q 038818 276 CPEFRHF--IDG-IEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR- 351 (486)
Q Consensus 276 ~~~~~~~--~~~-~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~- 351 (486)
.+..... ..+ .+..|.++.+++|+++.+. |++.. +++..........+|.+.. +..
T Consensus 223 g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G--G~~~~-~~~~~~~l~~~~~~~~~s~-----------------~~~~ 282 (410)
T PRK13392 223 GARGGGIAERDGLMDRIDMIQGTLAKAFGCLG--GYIAA-SADLIDFVRSFAPGFIFTT-----------------ALPP 282 (410)
T ss_pred CCCCCchhhhccCCCCCcEEEEEChHhhhccc--chhhc-CHHHHHHHHHhCcchhccC-----------------cCCH
Confidence 1111111 111 2357888889999998753 55543 4443332222222232111 001
Q ss_pred CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHH
Q 038818 352 FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKL 431 (486)
Q Consensus 352 ~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l 431 (486)
....++..+++.+ +......++..++++++.+.|++. ++++. ++..+++.+.+.. +....++
T Consensus 283 ~~~~a~~aaL~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~i~~~~--------------~~~~~~~ 344 (410)
T PRK13392 283 AVAAGATAAIRHL--KTSQTERDAHQDRVAALKAKLNAN-GIPVM-PSPSHIVPVMVGD--------------PTLCKAI 344 (410)
T ss_pred HHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeCC--------------HHHHHHH
Confidence 1122333444433 222344567788899999999887 77765 4556666555431 2224567
Q ss_pred HHHHH-hcCcEEEeee----eECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 432 LESIN-ASGQLYVSHG----MVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 432 ~~~l~-~~g~~~~~~~----~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
.++|. ++|+. +.+. ...+..++|++++ ...|++|+|+++++|+++.+++
T Consensus 345 ~~~L~~~~GI~-v~~~~~p~~~~~~~~lRis~~-~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 345 SDRLMSEHGIY-IQPINYPTVPRGTERLRITPT-PLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred HHHHHHhCCEE-EeeeCCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHHc
Confidence 77775 56764 3332 1234578999985 4667779999999999987754
No 92
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.87 E-value=8.6e-21 Score=171.23 Aligned_cols=306 Identities=18% Similarity=0.192 Sum_probs=204.5
Q ss_pred ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCC
Q 038818 102 GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQT 181 (486)
Q Consensus 102 ~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~ 181 (486)
...|...|....||++ +++++|-+ .|.|.++||++|+.|++..+.. ++..|++.+.+
T Consensus 49 DdVyGeD~tt~rLE~~----vA~l~GKE---------AgLFv~SGTmgNllaIm~Hc~~----------rg~eii~gd~~ 105 (384)
T KOG1368|consen 49 DDVYGEDPTTNRLEQR----VAELFGKE---------AGLFVPSGTMGNLLAIMVHCHQ----------RGSEIIVGDRA 105 (384)
T ss_pred cccccCCccHHHHHHH----HHHHhCcc---------ceeeecccccccHHHHHHHhcC----------CCceEEeccch
Confidence 3577788888999987 56667654 4689999999999999998875 77889999999
Q ss_pred chHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHH-HCCC-ccEEEEeecCCcccc-ccCCc---hHHHHH
Q 038818 182 HSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDI-QAGL-IPLFLCATVGTTAIT-TVDPL---GPLCDI 255 (486)
Q Consensus 182 H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~-~~g~-~p~~vv~~~gtt~~G-~idpl---~~I~~i 255 (486)
|.-.+....+.-++...++.|...+ ++.||++++|+++.... .-+. ...+|++..-.+.+| .+-|| ++|.++
T Consensus 106 HI~~~E~gg~s~l~gv~~~tv~~e~--dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~l 183 (384)
T KOG1368|consen 106 HIHRYEQGGISQLAGVHVRTVKNEN--DGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKAL 183 (384)
T ss_pred heeehhccChhhhccceeEeeeeCC--CCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHH
Confidence 9776554333322222777776654 67999999999998432 2222 335677776666667 66665 567788
Q ss_pred HHHhCceEEeeccccch---hccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCcc
Q 038818 256 AKRYSIWVHVDAAYAGS---ACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKA 332 (486)
Q Consensus 256 ~~~~g~~lhvD~a~g~~---~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~ 332 (486)
|+++|+.||+|||.-.. +.-.|- +.. .+.+||+++...|.+++|. |-+++..++.+.++. ++..
T Consensus 184 ak~~glkLH~DGARi~NAavasgV~v-k~i---~~~fDSVsiCLSKglgAPV--GSViVG~k~FI~kA~-----~~RK-- 250 (384)
T KOG1368|consen 184 AKRHGLKLHMDGARIFNAAVASGVPV-KKI---CSAFDSVSICLSKGLGAPV--GSVIVGSKDFIDKAR-----HFRK-- 250 (384)
T ss_pred HhccCCeeecchhhhhhHHHHcCCCH-HHH---HHhhhhhhhhhhccCCCCc--ccEEEccHHHHHHHH-----HHHH--
Confidence 99999999999985222 122221 111 2479999999999999995 445565554443322 1111
Q ss_pred CCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC-CCeeEEEEEeecC
Q 038818 333 SDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP-RNFAVVCFRVLPS 411 (486)
Q Consensus 333 ~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~ 411 (486)
++.+|-|-...-+.+++-.+. +.+ ..+++.++.|+.+++.++..+++++-.+ .+++++...+..+
T Consensus 251 ------------alGGGmRQsGvLaaaaLval~-~~~-~~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~ 316 (384)
T KOG1368|consen 251 ------------ALGGGMRQSGVLAAAALVALD-ENV-PLLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQA 316 (384)
T ss_pred ------------HhcCchhHHHHHHHHHHHHhh-cch-HHHHHHHHHHHHHHHHhccccceeeecchhhcceeeeecccc
Confidence 112222222211122222221 222 3667778889999999998877888655 5778888776543
Q ss_pred CCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 038818 412 ASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQE 477 (486)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~ 477 (486)
. ...+.+.+++.+.|+..+.... ..+|+++ ++..|.++++.+++.+.+
T Consensus 317 ~-------------~~~~~l~~~~~k~gi~lm~~~s----~r~Rivl-h~Qvt~~~ve~~~~~~~k 364 (384)
T KOG1368|consen 317 R-------------LTAEELCKFLEKNGILLMGGAS----RRIRIVL-HHQVTDEDVEYVKSVLSK 364 (384)
T ss_pred c-------------CCHHHHHHHHHHCCeEEeeccc----cceEEEE-EEecCHHHHHHHHHHHHH
Confidence 2 2245678888888987665432 3489998 678899999999999954
No 93
>PRK07324 transaminase; Validated
Probab=99.87 E-value=1.3e-19 Score=181.21 Aligned_cols=314 Identities=12% Similarity=0.071 Sum_probs=200.2
Q ss_pred hhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEE
Q 038818 96 SGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVV 175 (486)
Q Consensus 96 ~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v 175 (486)
..+......|....+..++++.+.+++. +.+++ ..++|+|+++++..++.+... +++.|
T Consensus 49 ~~~~~~~~~Y~~~~G~~~lr~~ia~~~~---~~~~~-------~vi~t~G~~~al~~~~~~l~~-----------~gd~V 107 (373)
T PRK07324 49 QELGQKKLTYGWIEGSPEFKEAVASLYQ---NVKPE-------NILQTNGATGANFLVLYALVE-----------PGDHV 107 (373)
T ss_pred HHHhcCCccCCCCCCCHHHHHHHHHHhc---CCChh-------hEEEcCChHHHHHHHHHHhCC-----------CCCEE
Confidence 3344444455554455666666555543 34443 689999999999887776543 56778
Q ss_pred EecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHH
Q 038818 176 YGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPL 252 (486)
Q Consensus 176 ~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I 252 (486)
+++..+|.+....++..|+ +++.+|+++++.+.+|+++|++++.++ +.+|+++.++|+||.+-+ +++|
T Consensus 108 l~~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~d~~~l~~~~~~~------~kli~i~~p~NPtG~~~~~~~l~~i 178 (373)
T PRK07324 108 ISVYPTYQQLYDIPESLGA---EVDYWQLKEENGWLPDLDELRRLVRPN------TKLICINNANNPTGALMDRAYLEEI 178 (373)
T ss_pred EEcCCCchhHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHhCCCC------CcEEEEeCCCCCCCCCCCHHHHHHH
Confidence 8888999999999999999 999999986445789999999887643 347888999999999977 8999
Q ss_pred HHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCc
Q 038818 253 CDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNK 331 (486)
Q Consensus 253 ~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~ 331 (486)
+++|++||+++++|++|..... ...........+. .....++.|.++.| ..+|+++. ++.......... .+..
T Consensus 179 ~~~a~~~~~~ii~De~y~~l~~-~~~~~s~~~~~~~-~I~~~s~SK~~~~~G~RiG~i~~-~~~li~~~~~~~-~~~~-- 252 (373)
T PRK07324 179 VEIARSVDAYVLSDEVYRPLDE-DGSTPSIADLYEK-GISTNSMSKTYSLPGIRVGWIAA-NEEVIDILRKYR-DYTM-- 252 (373)
T ss_pred HHHHHHCCCEEEEEcccccccc-CCCCCChhhccCC-EEEEecchhhcCCccceeEEEec-CHHHHHHHHHHh-CcEE--
Confidence 9999999999999999966432 1111111111111 23455789998744 45788877 444433221111 1100
Q ss_pred cCCCCCccCCCCccccCCCCCCchHHHHHHHHhc--hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEE-Ee
Q 038818 332 ASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFG--VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCF-RV 408 (486)
Q Consensus 332 ~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f-~~ 408 (486)
.+ ...+..+++...+. ...++++.+...++.+.+.+.|++.+++.+..+ ..+...| ++
T Consensus 253 ---------------~~---~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p-~gg~~~~i~~ 313 (373)
T PRK07324 253 ---------------IC---AGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKP-KAVSTSFVKL 313 (373)
T ss_pred ---------------ec---CChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECC-CceEEEEEEe
Confidence 00 12223333333332 233455556666778888888988878876644 4344333 33
Q ss_pred ecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 409 LPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
.... + ..++.+++. +.|+.+.++..+...+++|+++.. +++.+++.++.|.+.+++
T Consensus 314 ~~~~------------~--~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~---~~~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 314 DVDM------------P--SEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCC---DTETLKKGLKKLSEFLRE 370 (373)
T ss_pred CCCC------------C--HHHHHHHHHHhcCEEEECccccCCCCeEEEEecC---CHHHHHHHHHHHHHHHHh
Confidence 3210 1 234555554 567765555545446799999853 467889988888887765
No 94
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.87 E-value=9.4e-20 Score=173.03 Aligned_cols=384 Identities=15% Similarity=0.118 Sum_probs=245.8
Q ss_pred CCCCCCCHHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHHHHHHhhcC--CCccc---cccChhhHHHHHHHHH
Q 038818 46 APYNPEPIETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGEMLSSGFN--VVGFN---WMSSPAATELENIVMD 120 (486)
Q Consensus 46 ~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n--~~~~~---~~~~~~~~~le~~~~~ 120 (486)
.|....|+-|+++.+.++-..+..-.....-+|-+. .-+-. ..++....+. .+.+. -++..+..++-.++.+
T Consensus 40 ~~~Pe~SE~e~~Rh~~rLs~kn~avd~~m~PLGSCT--MK~Np-~~e~~~~~~p~f~~iHP~~pe~~vqG~l~li~~Lq~ 116 (496)
T COG1003 40 PPLPEHSETEMVRHYTRLSQKDLAVDRGMIPLGSCT--MKLNP-KAEMKPATWPEFANIHPFQPEEQVQGYLELIYELQE 116 (496)
T ss_pred CCCccccHHHHHHHHHHHHhcccccccCccCCcccc--cccCc-hhhcccccccchhhcCCCCChHHHHHHHHHHHHHHH
Confidence 343336899999999987555544333333344221 00000 1122221221 11222 2344556788889999
Q ss_pred HHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeE
Q 038818 121 WLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFR 200 (486)
Q Consensus 121 ~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~ 200 (486)
||+++.|++.- .+=...|+++-+++|++.|.....+ |.. .+.++++++.+|-.....|.+.|+ +|+
T Consensus 117 ~L~~ITG~Dav--------sLQP~AGAqGE~aGll~Ir~YHe~r-G~~--~R~~~LIP~SAHGTNPASAam~G~---~VV 182 (496)
T COG1003 117 WLKEITGMDAV--------SLQPNAGAQGEYAGLLAIRAYHESR-GEG--HRNICLIPDSAHGTNPASAAMAGF---KVV 182 (496)
T ss_pred HHHHhcCCcee--------eccCCCCcchhhHHHHHHHHHHHHc-CCC--cCcEEEeeccccCCChhhHhhcCc---eEE
Confidence 99999999752 2334567788888998888765433 221 678899999999999999999999 999
Q ss_pred EEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc-CCchHHHHHHHHhCceEEeeccccchhccCccc
Q 038818 201 AIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV-DPLGPLCDIAKRYSIWVHVDAAYAGSACICPEF 279 (486)
Q Consensus 201 ~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i-dpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~ 279 (486)
.|++++ +|.+|+++|++++.++++ .+.+|.++| .|.+ .+|.+|++|.+++|-.+..|||.--..+..-.
T Consensus 183 ~V~~~~--~G~VDlddLk~k~~~~~A------alMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~r- 252 (496)
T COG1003 183 VVKCDE--NGNVDLDDLRAKAEDNLA------ALMITNPST-LGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLAR- 252 (496)
T ss_pred EEecCC--CCCccHHHHHHHhcccee------EEEeccCcc-cccchhhHHHHHHHHHHcCCEEEecCcchhhhhcccc-
Confidence 999986 679999999999987654 678888877 5777 57999999999999999999987432221111
Q ss_pred hhhhcCCCCCCceeeccccccCCCCc-----ceEEEeeCchHHHHHhcCCcccccCccC--CCCC-ccCC-CCccccCCC
Q 038818 280 RHFIDGIEGADSFSLNAHKWFFTTLD-----CCCLWVKNPNALIKALSTNPEFLRNKAS--DSKQ-VVDY-KDWQITLSR 350 (486)
Q Consensus 280 ~~~~~~~~~aDsi~~~~hK~l~~p~~-----~g~~~~~~~~~~~~~~~~~~~y~~~~~~--~~~~-~~~~-~~~~~~~sr 350 (486)
.|--++|.+-++.||+|..|.| .|.+.++.. +. +|+-.... +... ..+. ..++..-++
T Consensus 253 ----PGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~--L~-------pfLP~p~~~~~~~~y~~~~~~~~s~g~~~ 319 (496)
T COG1003 253 ----PGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAH--LA-------PFLPGPVVYHDVGEYRLDYDGKKSIGVSA 319 (496)
T ss_pred ----ccccccceEEeecccccccCCCCCCCCCCceehHhh--cc-------ccCCCCcccCCCccccccCCCCccceeec
Confidence 1223899999999999998754 556666632 21 22211100 0000 0000 001111111
Q ss_pred C----CCc-hHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCC---eeEEEEEeecCCCCCCCCCCcc
Q 038818 351 R----FRA-LKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRN---FAVVCFRVLPSASGLGDGKANE 422 (486)
Q Consensus 351 ~----~~~-l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~ 422 (486)
. +.. ...|++++.+|.+|+++.-+...-+|+|+.++|+. .++++..+. ...+.+...+-. +
T Consensus 320 a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~--~y~~~y~~~~~~~HE~ild~r~l~---------~ 388 (496)
T COG1003 320 APYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKG--YYPVPYTGENRVAHECILDARPLK---------K 388 (496)
T ss_pred cccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh--cCccccCCCCcceeEEEeechHhH---------h
Confidence 1 122 47799999999999999999999999999999986 466655443 455555554321 1
Q ss_pred chHHHHHHHHHHHHhcCcEEEeeeeECC---EeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 423 GANELNRKLLESINASGQLYVSHGMVAG---IYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 423 ~~~~~~~~l~~~l~~~g~~~~~~~~~~~---~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
..+.....+.++|.+.|. -.||.... ...+-+=.+ ..-+++++|++++++.++.++.-
T Consensus 389 ~~Gv~~~DvAKrLlD~Gf--HaPT~~FPliV~~tLMIEPT-EsEsk~eLDrf~dami~I~~Ea~ 449 (496)
T COG1003 389 ETGVRALDVAKRLLDYGF--HAPTMYFPLIVAGTLMIEPT-ESESKEELDRFIDAMIAIREEAD 449 (496)
T ss_pred hcCCcHHHHHHHHHhcCC--CCCcccCccccccceeecCC-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 112223455666777785 34443322 233333333 24466899999999999987654
No 95
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.87 E-value=1.2e-19 Score=178.21 Aligned_cols=368 Identities=13% Similarity=0.082 Sum_probs=193.0
Q ss_pred ChhHHhhcCCCCCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHHH-HHHh--hc---CCCcccccc
Q 038818 34 EPGYLRKRLPESAPYNPEPIETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGE-MLSS--GF---NVVGFNWMS 107 (486)
Q Consensus 34 ~p~~~~~~~~~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~l~~--~~---n~~~~~~~~ 107 (486)
=|++++..-+..+|+. .|+.|+++++.++..+|.. ...|+|--...--.|+++.+ .+.. ++ .++...-++
T Consensus 31 IP~~i~~~~~~~lp~~-~sE~e~~r~~~~la~kN~~---~~~fiG~G~y~~~~P~~i~~~i~~~~ef~TaYtPYQpEisQ 106 (429)
T PF02347_consen 31 IPEEIRLKKPLNLPEP-LSEYELLRHLERLASKNKS---YTSFIGAGSYTHYVPAVIDRNILSRPEFYTAYTPYQPEISQ 106 (429)
T ss_dssp S-GGG-SS-----------HHHHHHHHHHHHTTS-----TTS---CTTT-----HHHHH-HHCCHHCCCS-STTSGGGBH
T ss_pred CCHhhcCCCCCCCCCC-CCHHHHHHHHHHHHhcCCC---CCccccccccCceeChhhcCccccChhhhccCCCCCcHHHH
Confidence 3677776667788855 8999999999998777654 44566644334456666666 3211 12 233322233
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH
Q 038818 108 SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK 187 (486)
Q Consensus 108 ~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 187 (486)
|.....+|. ..+++++.|++.. +..+..++|.+-- |+.++.+.. + ..+.+|+++...|+....
T Consensus 107 G~Lq~lfe~--Qs~i~eLTGmdva-------NaSlyd~atA~aE-a~~ma~r~~-~------~~~~~vlv~~~~hP~~~~ 169 (429)
T PF02347_consen 107 GRLQALFEY--QSMICELTGMDVA-------NASLYDGATAAAE-AMLMAVRAT-K------RKRNKVLVPESLHPQTRA 169 (429)
T ss_dssp HHHHHHHHH--HHHHHHHHTSSEE--------SEBSSCCHHHHH-HHHHHHHHH-T------T---EEEEETTS-CHHHH
T ss_pred HHHHHHHHH--HHHHHHhhCCCcc-------CCCCCChhHHHHH-HHHHHHHhc-c------cCCcEEEEcCCcChhhHH
Confidence 444444554 4999999999875 5678888875443 333333221 0 023578899999998776
Q ss_pred HHHH----cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceE
Q 038818 188 AAQI----AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWV 263 (486)
Q Consensus 188 a~~~----~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~l 263 (486)
.++. .|+ +++.+|.++ .+..| ++ ....|+++.|++ .|.++++++|++++|++|..+
T Consensus 170 v~~t~a~~~g~---~iv~~~~~~--~~~~d--------~~------~~a~v~vq~Pn~-~G~~ed~~~i~~~~h~~gal~ 229 (429)
T PF02347_consen 170 VLRTYAAPLGI---EIVEVPLDE--DGTTD--------DD------DTAAVMVQNPNT-FGVFEDIKEIADIAHAAGALV 229 (429)
T ss_dssp HHHHHCCHCCE---EEEEE-BBT--TCSB---------ST------TEEEEEEESS-T-TSB--THHHHHHHHHHTT-EE
T ss_pred HHHHhhhhCCe---EEEEecccc--cCCcc--------cc------CeEEEEeecCCC-CceEeeHHHHHHHHHHcCCEE
Confidence 5544 566 888998875 34666 22 245677777765 799999999999999999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-----cceEEEeeCchHHHHHhcCCcccccCccCCCCCc
Q 038818 264 HVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-----DCCCLWVKNPNALIKALSTNPEFLRNKASDSKQV 338 (486)
Q Consensus 264 hvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-----~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~ 338 (486)
++ ++-.-........... +||.+ +.-||.|+.|. ++|++.++++ .....|+.+.+...+..+.
T Consensus 230 ~~-~ad~~aL~~l~~Pge~-----GADI~-vg~~Q~fg~p~~~GGP~~G~~a~~~~-----l~r~lPGRiVG~t~D~~G~ 297 (429)
T PF02347_consen 230 IV-GADPNALGGLKSPGEY-----GADIV-VGEHQTFGIPMGFGGPGAGFFAVRED-----LVRQLPGRIVGQTKDADGK 297 (429)
T ss_dssp EE-CGGCCGCCTC--GGGG-----T-SEE-EECCTTTT---CCC-S--EEEEE-GG-----GGGGS-S-EEEEEEBCCCS
T ss_pred EE-ecCHHHHhCcCChhhc-----CccEE-eeCCCCCcccCCCCCCCeeeEEEhhh-----hhhhCCCceeccccccccc
Confidence 88 6654333222211221 89999 55588888775 4778888876 2244566655432222222
Q ss_pred cCCCCcccc----CCCCC------------CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCee
Q 038818 339 VDYKDWQIT----LSRRF------------RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFA 402 (486)
Q Consensus 339 ~~~~~~~~~----~sr~~------------~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~ 402 (486)
..+. .+++ .-||. .++..+.++..+|.+|++++.++...+|+|++++|++..++.+ ..+.+.
T Consensus 298 ~~~~-ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~-~~~~f~ 375 (429)
T PF02347_consen 298 RAFV-LTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPF-DNPFFF 375 (429)
T ss_dssp CCEE-EE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECS-SSSSBS
T ss_pred ceee-eccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-CCCCce
Confidence 2211 1111 01121 1245677888899999999999999999999999998733433 233333
Q ss_pred EEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHH
Q 038818 403 VVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVV 475 (486)
Q Consensus 403 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l 475 (486)
.+.....+. .. ..++.++....| +.... .+...+-+|++ ..+|++|||++++++
T Consensus 376 e~v~~~~~~-------------~~-~~~l~~~~~~~g---l~~~~-~~~~~~li~~T-E~~t~edid~lv~~f 429 (429)
T PF02347_consen 376 EFVVVFSKD-------------KE-VEELLKRGIEGG---LNLRY-PDDGALLICVT-ETRTKEDIDRLVEAF 429 (429)
T ss_dssp SEEEEESS--------------HH-HHHHHHTT-------EEEGG-G-SSEEEEE---TT--HHHHHHHHH--
T ss_pred eeeeecCCc-------------HH-HHHHHHHHHhcC---CCccc-cCCCeEEEEcc-CCCCHHHHHHHHhcC
Confidence 333333221 12 223566555555 22111 12237788986 577888999999875
No 96
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.86 E-value=5.9e-19 Score=179.02 Aligned_cols=342 Identities=10% Similarity=0.042 Sum_probs=215.6
Q ss_pred HHHHHHHHHHhhcCCC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCc-cCCCcceEEcCCchHHHHHHHHHHHHHHHH
Q 038818 86 IAGFLGEMLSSGFNVV-GFNWMSSPAATELENIVMDWLGEMLKLPKSFL-FSGTGGGVIQGTTCEAILCTLAAARDQILN 163 (486)
Q Consensus 86 ~~~~~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~-~~~~~~~~~t~ggt~a~~~al~~a~~~~~~ 163 (486)
++..+.+.+...++.+ ...|....+..++.+.+.+|+.+.++.+.... .-.....++|+|+++++..++.+...
T Consensus 51 p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~---- 126 (412)
T PTZ00433 51 TPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCD---- 126 (412)
T ss_pred CCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcC----
Confidence 4556666666655532 34555444567888888899887654110000 00113789999999998877766543
Q ss_pred HccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccc
Q 038818 164 EIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAI 243 (486)
Q Consensus 164 ~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~ 243 (486)
+++.|+++..+|..+...++..|+ +++.+|+++++++.+|+++|++++++. +.+|+++.++|||
T Consensus 127 -------~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~------~~~i~~~~p~NPt 190 (412)
T PTZ00433 127 -------EGDNILVPAPGFPHYETVCKAYGI---EMRFYNCRPEKDWEADLDEIRRLVDDR------TKALIMTNPSNPC 190 (412)
T ss_pred -------CCCEEEEccCCcccHHHHHHHcCC---EEEEEecCccccCcCCHHHHHHHhccC------ceEEEEeCCCCCC
Confidence 567888899999999999999999 999999976456799999999887653 3467888999999
Q ss_pred cccC---CchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCC-CCC-ceeeccccccC-CCCcceEEEeeCc---
Q 038818 244 TTVD---PLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIE-GAD-SFSLNAHKWFF-TTLDCCCLWVKNP--- 314 (486)
Q Consensus 244 G~id---pl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~-~aD-si~~~~hK~l~-~p~~~g~~~~~~~--- 314 (486)
|.+- .+++|+++|+++|+++++|++|..+......+.. +..+. ..+ .+..++.|.++ ...-+|+++..++
T Consensus 191 G~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~ 269 (412)
T PTZ00433 191 GSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTS-VADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGN 269 (412)
T ss_pred CcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccc-hhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCccc
Confidence 9864 5788899999999999999999754321111111 11111 112 44567899985 5567999887332
Q ss_pred --hHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHhC
Q 038818 315 --NALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF---GVANLRNFLRSHVRMAQLFQELVGG 389 (486)
Q Consensus 315 --~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~ 389 (486)
..+. .+........ ....+...+....+ ..+.+++..++..+..+.+.+.|++
T Consensus 270 ~~~~~~-~~~~~~~~~~---------------------~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 327 (412)
T PTZ00433 270 GGDFLD-GMKRLGMLVC---------------------GPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGE 327 (412)
T ss_pred HHHHHH-HHHHHhhccC---------------------CCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2222 1111000000 01122222222222 1345667777788888899999988
Q ss_pred CCCeEEecCCCeeE-EEEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeECCEeEEEEEecCCCCcHHH
Q 038818 390 DNRFEIVAPRNFAV-VCFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVAGIYFIRFAVGATLTEDRH 467 (486)
Q Consensus 390 ~~~~~~~~~~~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~d 467 (486)
..++++. +|+.+. +.+++...... . .....++.+.+. +.|+.+..+..+...+++|+++.. .+++
T Consensus 328 ~~~~~~~-~p~gg~f~~~~l~~~~~~-------~--~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~---~~e~ 394 (412)
T PTZ00433 328 CIGLSPT-MPRGSMFLMSRLDLEKFR-------D--IKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISR---PVEV 394 (412)
T ss_pred CCCCccc-CCCeeEEEEEEechhhcC-------C--CCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecC---CHHH
Confidence 6667654 444444 44455321000 0 000235666666 468765544444446799999953 3678
Q ss_pred HHHHHHHHHHHHHHHh
Q 038818 468 VIAAWKVVQEKLDGIL 483 (486)
Q Consensus 468 id~~i~~l~~~~~~l~ 483 (486)
+++.++.|.+++++..
T Consensus 395 l~~al~~l~~~~~~~~ 410 (412)
T PTZ00433 395 LREAVERIKAFCERHK 410 (412)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999998887643
No 97
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.86 E-value=1.6e-19 Score=181.34 Aligned_cols=300 Identities=12% Similarity=0.105 Sum_probs=191.8
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCC
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGID 195 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g 195 (486)
.++++++++++|.+++ ..++|+|+|+++..++.+... ++..|+++..+|......+...|.
T Consensus 69 ~~lr~~ia~~l~~~~~-------~v~~~~g~t~al~~~~~~~~~-----------~gd~vl~~~p~y~~~~~~~~~~g~- 129 (380)
T PRK06225 69 PELRELILKDLGLDDD-------EALITAGATESLYLVMRAFLS-----------PGDNAVTPDPGYLIIDNFASRFGA- 129 (380)
T ss_pred HHHHHHHHHhcCCCCC-------cEEEeCCHHHHHHHHHHHhcC-----------CCCEEEEcCCCCcchHHHHHHhCc-
Confidence 3456778888898765 789999999998877766532 456677888888888888899999
Q ss_pred CCCeEEEecCC-CCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc---CCchHHHHHHHHhCceEEeeccccc
Q 038818 196 PKNFRAIKTTK-SSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV---DPLGPLCDIAKRYSIWVHVDAAYAG 271 (486)
Q Consensus 196 ~~~v~~v~~d~-~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i---dpl~~I~~i~~~~g~~lhvD~a~g~ 271 (486)
+++.+|++. .+++.+|++++++.+.+.+ .+|+++.++|++|.+ +++++|+++|+++|+++++|++|+.
T Consensus 130 --~~~~v~~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~ 201 (380)
T PRK06225 130 --EVIEVPIYSEECNYKLTPELVKENMDENT------RLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRD 201 (380)
T ss_pred --eEEeeccccccCCccCCHHHHHhhcCCCc------eEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHH
Confidence 999999753 2347899999999886543 367777899999987 4599999999999999999999865
Q ss_pred hhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCC
Q 038818 272 SACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSR 350 (486)
Q Consensus 272 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr 350 (486)
+....+.... + ......+..+++|+++.| ..+|+++.++ .... .+.. +... + .
T Consensus 202 ~~~~~~~~~~-~--~~~~~i~~~s~SK~~g~~G~RiG~i~~~~-~l~~-~~~~---~~~~--------------~--~-- 255 (380)
T PRK06225 202 FAREHTLAAE-Y--APEHTVTSYSFSKIFGMAGLRIGAVVATP-DLIE-VVKS---IVIN--------------D--L-- 255 (380)
T ss_pred HhccCCchhh-c--CCCCEEEEeechhhcCCccceeEEEecCH-HHHH-HHHH---HHhc--------------c--c--
Confidence 3211110000 0 112334556778999644 3478888754 3332 2211 1000 0 0
Q ss_pred CCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe-cCCCeeEEEEEeecCCCCCCCCCCccchHHH
Q 038818 351 RFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIV-APRNFAVVCFRVLPSASGLGDGKANEGANEL 427 (486)
Q Consensus 351 ~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~ 427 (486)
....+...++...+ ..+.+++..+...++.+.+.+.|++++++.+. .++..+.+.+.+.+.. . +
T Consensus 256 ~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~---------~--~-- 322 (380)
T PRK06225 256 GTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAG---------I--D-- 322 (380)
T ss_pred CCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEccccc---------C--C--
Confidence 01122222222221 22334444455556677788888887775432 3445556655554321 0 1
Q ss_pred HHHHHHHHHhcCcEEEeeeeE---CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 428 NRKLLESINASGQLYVSHGMV---AGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 428 ~~~l~~~l~~~g~~~~~~~~~---~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
..++.++|.++|+.+.++... .+..++|+++.. ++++++++++.|+++++.+.+
T Consensus 323 ~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~~---~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 323 PEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFSI---PREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred HHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeCC---CHHHHHHHHHHHHHHHHHhhc
Confidence 235666777778744332211 235689999842 578999999999999988764
No 98
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.86 E-value=2.7e-19 Score=180.27 Aligned_cols=294 Identities=14% Similarity=0.099 Sum_probs=190.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
..+..++.+++++++|.+ ..+++++|+++++.++..... +++.|+++...|.+...++..
T Consensus 83 ~~~~~~l~~~la~~~~~~---------~~i~~~~g~~~~~~~l~~~~~-----------~gd~V~~~~~~~~~~~~~~~~ 142 (385)
T PRK05958 83 SPAHEALEEELAEWFGAE---------RALLFSSGYAANLAVLTALAG-----------KGDLIVSDKLNHASLIDGARL 142 (385)
T ss_pred cHHHHHHHHHHHHHhCCC---------cEEEECcHHHHHHHHHHHhCC-----------CCCEEEEeCccCHHHHHHHHh
Confidence 445666778889988843 357777788888765544322 567888899999999999999
Q ss_pred cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccc
Q 038818 192 AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAG 271 (486)
Q Consensus 192 ~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~ 271 (486)
.|. +++.+|. .|++.+++++++.. ..+.++++....+++|.+.|+++|+++|++||+|+++|++|+.
T Consensus 143 ~g~---~~~~~~~-------~d~~~l~~~i~~~~---~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~ 209 (385)
T PRK05958 143 SRA---RVRRYPH-------NDVDALEALLAKWR---AGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGT 209 (385)
T ss_pred cCC---ceEEeCC-------CCHHHHHHHHHhcc---CCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccc
Confidence 898 8888764 38899999887531 1234566667788999999999999999999999999999965
Q ss_pred hhccCc-c-chhhhcCCC-CCC-ceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCcccc
Q 038818 272 SACICP-E-FRHFIDGIE-GAD-SFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQIT 347 (486)
Q Consensus 272 ~~~~~~-~-~~~~~~~~~-~aD-si~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 347 (486)
+.+... . ... ..++. ..| .+..++||+++.+ | |+++. ++............+.. .
T Consensus 210 g~~~~~g~~~~~-~~~~~~~~~~i~~~s~sK~~~~~-G-g~~~~-~~~~~~~~~~~~~~~~~-----------------~ 268 (385)
T PRK05958 210 GVLGPQGRGLAA-EAGLAGEPDVILVGTLGKALGSS-G-AAVLG-SETLIDYLINRARPFIF-----------------T 268 (385)
T ss_pred cccCCCCCchHH-hhCCCCCCceEEEEechhhcccC-C-cEEEc-CHHHHHHHHHhCcccee-----------------c
Confidence 433211 0 111 11221 234 5578899999753 3 55544 44333221111111211 1
Q ss_pred CCCC-CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHH
Q 038818 348 LSRR-FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANE 426 (486)
Q Consensus 348 ~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~ 426 (486)
++.. ....++..+++.+.. . .++.++..++++++.+.|++. ++++. ++..+++.|.+.. ..
T Consensus 269 ~~~~~~~~aa~~aal~~~~~-~-~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~--------------~~ 330 (385)
T PRK05958 269 TALPPAQAAAARAALRILRR-E-PERRERLAALIARLRAGLRAL-GFQLM-DSQSAIQPLIVGD--------------NE 330 (385)
T ss_pred CCCCHHHHHHHHHHHHHHhc-C-HHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEeCC--------------HH
Confidence 1111 112233344444321 1 467788889999999999886 57754 4566777777642 12
Q ss_pred HHHHHHHHHHhcCcEEEeeee---ECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 427 LNRKLLESINASGQLYVSHGM---VAGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 427 ~~~~l~~~l~~~g~~~~~~~~---~~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
...++.+.|.++|+.+..... ..+..++|+++. ..++++|++++++.|+++
T Consensus 331 ~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~-~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 331 RALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLT-AAHTEADIDRLLEALAEA 384 (385)
T ss_pred HHHHHHHHHHHCCceEecccCCCCCCCCceEEEEec-CCCCHHHHHHHHHHHHhc
Confidence 345678888888875432111 123568999984 567888999999999875
No 99
>PLN02656 tyrosine transaminase
Probab=99.86 E-value=6.1e-19 Score=178.64 Aligned_cols=338 Identities=9% Similarity=0.033 Sum_probs=216.4
Q ss_pred HHHHHHHHHhhcCCC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHc
Q 038818 87 AGFLGEMLSSGFNVV-GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEI 165 (486)
Q Consensus 87 ~~~~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~ 165 (486)
|..+.+.+...+..+ ...|....+..++++.+.+++.+..|.+.+ ...+++|+|+++++..++.+...
T Consensus 50 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-----~~~i~~t~G~~~al~~~~~~l~~------ 118 (409)
T PLN02656 50 THVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLS-----LDDVFITSGCTQAIDVALSMLAR------ 118 (409)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCC-----cccEEEeCChHHHHHHHHHHHhC------
Confidence 445555565555443 345665666788989999999888776432 12789999999998777665533
Q ss_pred cccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 166 GRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 166 ~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
+++.|+++..+|..+...+...|+ +++.+|+++++++.+|+++|++++++. +.+|+++.++|+||.
T Consensus 119 -----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~P~NPtG~ 184 (409)
T PLN02656 119 -----PGANILLPRPGFPIYELCAAFRHL---EVRYVDLLPEKGWEVDLDAVEALADQN------TVALVIINPGNPCGN 184 (409)
T ss_pred -----CCCeEEEeCCCCCcHHHHHHHcCC---EEEEEeCCCcCCCCCCHHHHHHHhccC------ceEEEEECCCCCCCC
Confidence 667788898999888888889999 999999865445789999999887643 246788889999999
Q ss_pred c---CCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCC-C-ceeeccccccC-CCCcceEEEeeC------
Q 038818 246 V---DPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGA-D-SFSLNAHKWFF-TTLDCCCLWVKN------ 313 (486)
Q Consensus 246 i---dpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~a-D-si~~~~hK~l~-~p~~~g~~~~~~------ 313 (486)
+ +++++|+++|+++|+++++|++|+.+.......... ..+... - .+..++.|.++ ...-+|+++..+
T Consensus 185 ~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~ 263 (409)
T PLN02656 185 VYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPM-GVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFR 263 (409)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccH-HHhcccCcEEEEcccchhccCcceeEEEEEEeCcccccc
Confidence 8 578999999999999999999997644321111111 011111 1 34566899855 446799988753
Q ss_pred -chHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHhC
Q 038818 314 -PNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF---GVANLRNFLRSHVRMAQLFQELVGG 389 (486)
Q Consensus 314 -~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~ 389 (486)
+.... .+........ ....+...++...+ ..+.+++..+...+.++.+.+.|++
T Consensus 264 ~~~~~~-~~~~~~~~~~---------------------~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~ 321 (409)
T PLN02656 264 DPKIVE-RIKKYFDILG---------------------GPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKE 321 (409)
T ss_pred cHHHHH-HHHHHHhhhc---------------------CCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 22222 2211000000 01223333333333 2345777778888888899999988
Q ss_pred CCCeEEecCCCeeEEEE-EeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHH
Q 038818 390 DNRFEIVAPRNFAVVCF-RVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHV 468 (486)
Q Consensus 390 ~~~~~~~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~di 468 (486)
++++....+|..+.+.| ++...... .. ......+.+.+.+.|+.+.++..+...+++|++++. +++++
T Consensus 322 ~~~~~~~~~p~gg~~~w~~l~~~~~~------~~--~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~---~~e~l 390 (409)
T PLN02656 322 IPCITCPHKPEGSMAVMVKLNLSLLE------DI--SDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAA---DPSSL 390 (409)
T ss_pred CCCCcCCcCCCeEEEEEEecchhhcC------CC--CCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCC---CHHHH
Confidence 76554334566555444 33211000 00 000122344556678866655555556799999963 57789
Q ss_pred HHHHHHHHHHHHHHh
Q 038818 469 IAAWKVVQEKLDGIL 483 (486)
Q Consensus 469 d~~i~~l~~~~~~l~ 483 (486)
++.++.|++++.+..
T Consensus 391 ~eal~rl~~~~~~~~ 405 (409)
T PLN02656 391 EEALGRIKSFYLRHS 405 (409)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999988776543
No 100
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.86 E-value=3.9e-19 Score=180.27 Aligned_cols=299 Identities=13% Similarity=0.099 Sum_probs=193.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHc
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIA 192 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 192 (486)
....++.+.+++++|.+ ..++.++|++||..++..++.. .++.+|+.+...|.++..+++..
T Consensus 91 ~~~~~l~~~la~~~g~~---------~~~~~~sG~~an~~ai~~l~~~---------~~~~~i~~~~~~h~s~~~~~~~~ 152 (407)
T PRK09064 91 HYHVELERELADLHGKE---------AALVFTSGYVSNDATLSTLAKL---------IPDCVIFSDELNHASMIEGIRRS 152 (407)
T ss_pred HHHHHHHHHHHHHhCCC---------cEEEECcHHHHHHHHHHHHhCC---------CCCCEEEEeCcchHHHHHHHHHc
Confidence 34455666788888853 3467777889998888776532 14667777778899998888888
Q ss_pred CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccch
Q 038818 193 GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGS 272 (486)
Q Consensus 193 G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~ 272 (486)
|. .+..++. .|+++|++.++... ...+.+|+++.+.+++|.+.|+++|.++|++||++++||+||+.+
T Consensus 153 ~~---~~~~~~~-------~d~~~le~~l~~~~--~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G 220 (407)
T PRK09064 153 RC---EKHIFRH-------NDVAHLEELLAAAD--PDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVG 220 (407)
T ss_pred CC---cEEEECC-------CCHHHHHHHHHhcc--CCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCccc
Confidence 87 7666653 37899999886421 123567889999999999999999999999999999999999733
Q ss_pred hccCccchhh--hcCC-CCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCC
Q 038818 273 ACICPEFRHF--IDGI-EGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLS 349 (486)
Q Consensus 273 ~~~~~~~~~~--~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~s 349 (486)
.+ .+..... ..++ +..|.++.+++|.++.+ | |+++.+ ++..........+|.+. .+
T Consensus 221 ~~-g~~g~g~~~~~~~~~~~div~~t~sKa~g~~-G-G~~~~~-~~~~~~l~~~~~~~~~t-----------------~~ 279 (407)
T PRK09064 221 MY-GPRGGGIAERDGLMDRIDIIEGTLAKAFGVM-G-GYIAGS-AALVDAVRSYAPGFIFT-----------------TS 279 (407)
T ss_pred cc-CCCCCChHHhcCCCCCCeEEEEecchhhhcc-C-ceEecC-HHHHHHHHHhCcccccc-----------------Cc
Confidence 22 1111111 1122 35688888999998754 2 555543 33332111111222211 11
Q ss_pred CC-CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHH
Q 038818 350 RR-FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELN 428 (486)
Q Consensus 350 r~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~ 428 (486)
.. ..+.++..++..+... ....++..++++++.+.|++. +++++. +..+++.+.+.. ....
T Consensus 280 ~~~~~~~aa~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~iv~i~~~~--------------~~~~ 341 (407)
T PRK09064 280 LPPAIAAAALASIRHLKES--NEERERHQERAAKLKAALDAA-GIPVMP-NESHIVPVMVGD--------------PEKC 341 (407)
T ss_pred CCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-CCCCCC-CCCCEEEEEeCC--------------HHHH
Confidence 11 1223333444443222 334577888999999999886 777653 445676665532 1224
Q ss_pred HHHHHHHHh-cCcEEEeee----eECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 429 RKLLESINA-SGQLYVSHG----MVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 429 ~~l~~~l~~-~g~~~~~~~----~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
..+.+.|.+ .|++ +.+. ...+..++|+++. ...+++|+++++++|+++++++
T Consensus 342 ~~l~~~L~~~~gi~-v~~~~~p~~~~~~~~lRis~~-~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 342 KKASDMLLEEHGIY-VQPINYPTVPRGTERLRITPT-PFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred HHHHHHHHHhCCEE-EeeECCCCCCCCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHHc
Confidence 567777764 4764 3332 1224568999984 5778889999999999988765
No 101
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.86 E-value=4.6e-21 Score=188.36 Aligned_cols=288 Identities=17% Similarity=0.175 Sum_probs=186.0
Q ss_pred HHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHHHHHHhhcCCC-----------ccccccChhhHHHHHHHHHHHHH
Q 038818 56 ILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGEMLSSGFNVV-----------GFNWMSSPAATELENIVMDWLGE 124 (486)
Q Consensus 56 il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~-----------~~~~~~~~~~~~le~~~~~~l~~ 124 (486)
+++.|.+....+...|+.|.+-+-..-... .++..+..+++.+ ....-..|.....|. .+.+++
T Consensus 3 l~~aL~~y~~~~~~~fh~PGHk~G~~~~~~---p~g~~~~~f~G~~~~~~Dl~te~~~lD~L~~p~G~I~eA--e~~aA~ 77 (417)
T PF01276_consen 3 LFEALKKYAEEGPYSFHMPGHKGGRGFDKS---PAGRLFYDFFGENLFRADLSTEVPGLDDLHDPEGIIKEA--EELAAR 77 (417)
T ss_dssp HHHHHHHHHHTT-EESSSSTTTTTTCGGGS---HHHHHHHHHH-HHHHHT---TTSTTCBBTTTTBTHHHHH--HHHHHH
T ss_pred HHHHHHHHHhCCCceeecCccCCCCCCCcc---hHHHHHHHHHhhHHHHHHHhhcccccCcccCCccHHHHH--HHHHHH
Confidence 456677777778888888866542211122 1222222222111 122223344344444 488999
Q ss_pred HcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEec
Q 038818 125 MLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKT 204 (486)
Q Consensus 125 l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~ 204 (486)
+||.+.+| ++++|+|.+|..++.++.. +++.|+++..+|-|+..++.+.|+ .+++++.
T Consensus 78 ~fGAd~t~--------flvnGsT~g~~a~i~a~~~-----------~gd~VLv~RN~HkSv~~alil~ga---~Pvyi~p 135 (417)
T PF01276_consen 78 AFGADKTF--------FLVNGSTSGNQAMIMALCR-----------PGDKVLVDRNCHKSVYNALILSGA---IPVYIPP 135 (417)
T ss_dssp HHTESEEE--------EESSHHHHHHHHHHHHHTT-----------TTCEEEEETT--HHHHHHHHHHTE---EEEEEEE
T ss_pred hcCCCeEE--------EEecCchHHHHHHHHHhcC-----------CCCEEEEcCCcHHHHHHHHHHcCC---eEEEecC
Confidence 99998864 7889999999888877765 788999999999999999999999 9998876
Q ss_pred CCCC---CcccCH-----HHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccC
Q 038818 205 TKSS---SFTLTP-----ESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACIC 276 (486)
Q Consensus 205 d~~~---~~~~d~-----~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~ 276 (486)
...+ -+.+++ +.++++|++...... |.+|++|.+| ..|.+-++++|+++|+++|+.|+||+|||+.+.+.
T Consensus 136 ~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~-~~~vvlt~PT-Y~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~ 213 (417)
T PF01276_consen 136 EDNEYGIIGGISPDEFNEEDIEEALKEHPDAKA-PRLVVLTSPT-YYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFH 213 (417)
T ss_dssp EE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHC-ESEEEEESS--TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCS
T ss_pred CccccCCccCCChhhhhHHHHHHHHHhCccccC-ceEEEEeCCC-CCeEEECHHHHHHHhcccCCEEEEEccccccccCC
Confidence 5211 134566 999999987643211 4557777765 47999999999999999999999999999988777
Q ss_pred ccchhhhcCCCCCC-------ceeeccccccCCCCcceEEEeeCch-H----HHHHh----cCCcccccCccCCCCCccC
Q 038818 277 PEFRHFIDGIEGAD-------SFSLNAHKWFFTTLDCCCLWVKNPN-A----LIKAL----STNPEFLRNKASDSKQVVD 340 (486)
Q Consensus 277 ~~~~~~~~~~~~aD-------si~~~~hK~l~~p~~~g~~~~~~~~-~----~~~~~----~~~~~y~~~~~~~~~~~~~ 340 (486)
+-.+..+. -++| .++-|.||.+.+-.+++++.+++.. . +.+++ +..|.|+.
T Consensus 214 ~lp~~a~~--~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~l----------- 280 (417)
T PF01276_consen 214 PLPRSALA--LGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPL----------- 280 (417)
T ss_dssp GGGTTCSS--TTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHH-----------
T ss_pred CCccchhh--ccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHH-----------
Confidence 43333221 2789 9999999999999999999999874 2 22222 11222211
Q ss_pred CCCccccCCCCCCchHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHH---hCCCCeEEecCC
Q 038818 341 YKDWQITLSRRFRALKLWLVLRSF-GVANLRNFLRSHVRMAQLFQELV---GGDNRFEIVAPR 399 (486)
Q Consensus 341 ~~~~~~~~sr~~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L---~~~~~~~~~~~~ 399 (486)
-..+=.+.+.+ +.+| ++++++..++++.++++| ++++.|+++.++
T Consensus 281 -------------mASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~ 329 (417)
T PF01276_consen 281 -------------MASLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLNDIWGFKVLGPE 329 (417)
T ss_dssp -------------HHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-S
T ss_pred -------------HHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCcc
Confidence 01222233334 3344 567788888888999998 778888887654
No 102
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.86 E-value=3e-20 Score=183.06 Aligned_cols=308 Identities=13% Similarity=0.054 Sum_probs=198.2
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcC-CchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH
Q 038818 108 SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQG-TTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ 186 (486)
Q Consensus 108 ~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~-ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 186 (486)
++.+.++-+++++.+++++|.+.++ ..++++ |||+|+-.++...... +.+..++..+...|. +.
T Consensus 32 ~~~f~~~~~~~~~~l~~l~~~~~~~------~v~~~~gsgT~a~ea~~~nl~~~--------~~~~l~i~~G~fg~r-~~ 96 (349)
T TIGR01364 32 SKEFEAVANEAESDLRELLNIPDNY------EVLFLQGGATGQFAAVPLNLLAE--------GKVADYIVTGAWSKK-AA 96 (349)
T ss_pred chHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCCchHHHHHHHHhcCCC--------CCeEEEEECCHHHHH-HH
Confidence 4556688889999999999986542 455654 4998886665543221 112334444444443 46
Q ss_pred HHHHHcCCCCCCeEEEecCCCC--CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEE
Q 038818 187 KAAQIAGIDPKNFRAIKTTKSS--SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVH 264 (486)
Q Consensus 187 ~a~~~~G~g~~~v~~v~~d~~~--~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lh 264 (486)
+.|+.+|+ +..+..++.. .-..|+++++. ++ .+.+|.++++.|.||...| ++++.+++.++
T Consensus 97 ~~a~~~g~----~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~v~~th~ETstGv~~~-----~l~~~~~~l~i 159 (349)
T TIGR01364 97 KEAKKYGV----VNVVASGKEGNYTKIPDPSTWEI--SE------DAAYVHYCANETIHGVEFR-----ELPDVKNAPLV 159 (349)
T ss_pred HHHHHhCC----cEEEeccccCCCCCCCCHHhcCC--CC------CCCEEEEcCCCCcccEecc-----eecccCCCeEE
Confidence 67777776 3334432111 11456665552 21 2458999999999999876 77777899999
Q ss_pred eeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCc
Q 038818 265 VDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDW 344 (486)
Q Consensus 265 vD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 344 (486)
||++.+.+....+- ...|.+.+++||+++ |.|.|+++++++.+- +.-...+.|..... .....
T Consensus 160 VDavss~g~~~id~--------~~~d~~~~ssqK~lg-P~Glg~l~~s~~~~~-~~~~~~~~~~~~~~-------~~~~~ 222 (349)
T TIGR01364 160 ADMSSNILSRPIDV--------SKFGLIYAGAQKNIG-PAGLTVVIVRKDLLG-RASRITPSMLNYKI-------HAEND 222 (349)
T ss_pred EEccccccCccCCH--------HHccEEEEecccccC-CCceEEEEECHHHHh-hcccCCCCcchHHH-------HHhcC
Confidence 99999877665532 245699999999986 899999999987542 21111111210000 00000
Q ss_pred cccCCCC-CCchHHHHHHHHhchH-HHHHHHHHHHHHHHHHHHHHhCCCCeEEecC-C--Ce-eEEEEEeecCCCCCCCC
Q 038818 345 QITLSRR-FRALKLWLVLRSFGVA-NLRNFLRSHVRMAQLFQELVGGDNRFEIVAP-R--NF-AVVCFRVLPSASGLGDG 418 (486)
Q Consensus 345 ~~~~sr~-~~~l~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~--~~-~~v~f~~~~~~~~~~~~ 418 (486)
...++-. ....++..+++.+-.+ |++++.++..++++++++.|++++++..... + .+ .+++|.+.+.
T Consensus 223 ~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~------- 295 (349)
T TIGR01364 223 SMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNE------- 295 (349)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCCh-------
Confidence 0011111 1235666777877777 7999999999999999999999988765532 1 23 4577876532
Q ss_pred CCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 419 KANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 419 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
.+..++.+.+.++|. ++..... ..+.+|+|++ +.+|++|||+++++|+++.++
T Consensus 296 -------~~~~~~~~~~~~~Gi-~~~~~~~-~~g~vRvS~~-~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 296 -------ELEKRFLKEAEERGL-VSLKGHR-SVGGMRASIY-NAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred -------hHhHHHHHHHHHCCC-cccCCcc-ccCeeEEECc-CCCCHHHHHHHHHHHHHHHHh
Confidence 123456667778898 5544322 2357999996 577888999999999987653
No 103
>PRK07682 hypothetical protein; Validated
Probab=99.86 E-value=1.6e-19 Score=181.29 Aligned_cols=326 Identities=13% Similarity=0.092 Sum_probs=213.6
Q ss_pred HHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCC
Q 038818 91 GEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENI 170 (486)
Q Consensus 91 ~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~ 170 (486)
.+.+...+......|...+....+.+.+.+|+.+.+|.+.+. ....++|+|+++|+..++.+..+
T Consensus 39 ~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~~~i~~t~G~~~al~~~~~~l~~----------- 103 (378)
T PRK07682 39 REASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDP----NDEIIVTVGASQALDVAMRAIIN----------- 103 (378)
T ss_pred HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCChHHHHHHHHHHhCC-----------
Confidence 333433333333446556677899999999999988874221 01589999999998776655433
Q ss_pred CCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC---
Q 038818 171 SRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD--- 247 (486)
Q Consensus 171 ~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id--- 247 (486)
+++.|+++..+|..+...++..|. +++.++++.++++.+|+++|++++.+. +.+|+++.++|+||.+-
T Consensus 104 ~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~NPtG~~~s~~ 174 (378)
T PRK07682 104 PGDEVLIVEPSFVSYAPLVTLAGG---VPVPVATTLENEFKVQPAQIEAAITAK------TKAILLCSPNNPTGAVLNKS 174 (378)
T ss_pred CCCEEEEeCCCchhhHHHHHHcCC---EEEEeecCCccCCCCCHHHHHhhcCcc------cEEEEEECCCCCcCcCcCHH
Confidence 567788899999998889999998 899999865446799999999988653 34677788999999985
Q ss_pred CchHHHHHHHHhCceEEeeccccchhccCccchh--hhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCC
Q 038818 248 PLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRH--FIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTN 324 (486)
Q Consensus 248 pl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~--~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~ 324 (486)
.+++|+++|++|++++++|.+|+.+... +.... .+.+...-..+..++.|.++.| ..+|+++..++ ... .+...
T Consensus 175 ~~~~l~~~~~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~-~i~-~l~~~ 251 (378)
T PRK07682 175 ELEEIAVIVEKHDLIVLSDEIYAELTYD-EAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVY-FSE-AMLKI 251 (378)
T ss_pred HHHHHHHHHHHcCcEEEEehhhhhcccC-CCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHH-HHH-HHHHH
Confidence 4889999999999999999999765431 11111 1111112235677789999844 45888877543 322 22111
Q ss_pred cccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCee
Q 038818 325 PEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFA 402 (486)
Q Consensus 325 ~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~ 402 (486)
..+.. .....+...++...+ |...+++..++..+.++++.+.|+++ ++++. +|+.+
T Consensus 252 ~~~~~--------------------~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~p~g~ 309 (378)
T PRK07682 252 HQYSM--------------------MCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI-GLTCH-VPGGA 309 (378)
T ss_pred HHhhc--------------------cCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCee
Confidence 00100 001223333333333 34556777788888999999999987 77754 45555
Q ss_pred EEEEE-eecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 403 VVCFR-VLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 403 ~v~f~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
.+.|. +.+.. . + ...+.+.+. ++|+.+..+..+. +..++|++++. +++++++.++.|+++
T Consensus 310 ~~~~~~~~~~~---------~--~--~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~---~~~~l~~~l~~l~~~ 373 (378)
T PRK07682 310 FYAFPSISSTG---------L--S--SEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT---SLEQLQEAMKRMKRF 373 (378)
T ss_pred EEEEEeccCCC---------C--C--HHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC---CHHHHHHHHHHHHHH
Confidence 55553 32211 0 1 234566654 5677544443332 35799999963 477999999999988
Q ss_pred HHH
Q 038818 479 LDG 481 (486)
Q Consensus 479 ~~~ 481 (486)
+++
T Consensus 374 l~~ 376 (378)
T PRK07682 374 VEN 376 (378)
T ss_pred Hhh
Confidence 765
No 104
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.86 E-value=2.2e-19 Score=163.16 Aligned_cols=345 Identities=11% Similarity=0.069 Sum_probs=234.3
Q ss_pred eecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHH
Q 038818 78 AYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAA 157 (486)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a 157 (486)
=+.|++.+.+..+. .+.+.+... ..+|.+.++.+++.+-+...|...... --++.++|+.+.-.|+...
T Consensus 20 L~gPGPsnl~~~V~----~A~~~~~lg-h~sPe~~qIm~~v~egikyVFkT~n~~------tf~isgsGh~g~E~al~N~ 88 (385)
T KOG2862|consen 20 LLGPGPSNLSGRVQ----EAMSRPSLG-HMSPEFVQIMDEVLEGIKYVFKTANAQ------TFVISGSGHSGWEAALVNL 88 (385)
T ss_pred eecCCCcCCCHHHH----HhhcCCccc-cCCHHHHHHHHHHHHHHHHHhccCCCc------eEEEecCCcchHHHHHHhh
Confidence 45567666665443 345554443 367999999999999999999875542 3466777777766665554
Q ss_pred HHHHHHHccccCCCCeEEEecCCCchH--HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEE
Q 038818 158 RDQILNEIGRENISRLVVYGSDQTHSA--LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLC 235 (486)
Q Consensus 158 ~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv 235 (486)
.+ |++.+++-...-.+ +...++.+|+ +|..|+.+..+ ...++.+++.|...+ |.+|+
T Consensus 89 le-----------Pgd~vLv~~~G~wg~ra~D~~~r~ga---~V~~v~~~~G~--~~~le~i~~~lsqh~-----p~~vf 147 (385)
T KOG2862|consen 89 LE-----------PGDNVLVVSTGTWGQRAADCARRYGA---EVDVVEADIGQ--AVPLEEITEKLSQHK-----PKAVF 147 (385)
T ss_pred cC-----------CCCeEEEEEechHHHHHHHHHHhhCc---eeeEEecCccc--CccHHHHHHHHHhcC-----CceEE
Confidence 44 56666666566555 5566788999 99999888643 889999999998753 77999
Q ss_pred eecCCccccccCC-chHHHHHHHHhCceEEeeccccchhc--cCccchhhhcCCCCCCceeeccccccCCCCcceEEEee
Q 038818 236 ATVGTTAITTVDP-LGPLCDIAKRYSIWVHVDAAYAGSAC--ICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVK 312 (486)
Q Consensus 236 ~~~gtt~~G~idp-l~~I~~i~~~~g~~lhvD~a~g~~~~--~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~ 312 (486)
++++.|.||.++| ++.+.++|++|++.|.||+.-+.+.. ..+++ ++|..-...+|.+++|.|.+++.+.
T Consensus 148 v~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDew--------gVDvaytgSQKaL~aP~GLsiisfS 219 (385)
T KOG2862|consen 148 VTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEW--------GVDVAYTGSQKALGAPAGLSIISFS 219 (385)
T ss_pred EEecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhh--------cccEEEecchhhcCCCCCcceeecC
Confidence 9999999999999 78889999999999999986543332 23333 8999999999999999999998887
Q ss_pred CchHHHHHhcC---CcccccCccCCCCCccCCCCccccCCCCC------CchHHHHHHHHhchHHHHHHHHHHHHHHHHH
Q 038818 313 NPNALIKALST---NPEFLRNKASDSKQVVDYKDWQITLSRRF------RALKLWLVLRSFGVANLRNFLRSHVRMAQLF 383 (486)
Q Consensus 313 ~~~~~~~~~~~---~~~y~~~~~~~~~~~~~~~~~~~~~sr~~------~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l 383 (486)
++..- +.... ...|.++.. ...+++...-+..+.. ....+-.+|..+.++|+++.++++.++++++
T Consensus 220 ~ka~~-~~~~rK~~~~~~yFd~~----~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l 294 (385)
T KOG2862|consen 220 DKALE-AIRDRKTKPVSFYFDIL----RLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWL 294 (385)
T ss_pred HHHHH-HHhhccCCceEEEEeHH----hhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76442 22211 122222210 0011111111111111 1134556777788999999999999999999
Q ss_pred HHHHhCCCCeEEecC---CCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeee-ECCEeEEEEEec
Q 038818 384 QELVGGDNRFEIVAP---RNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGM-VAGIYFIRFAVG 459 (486)
Q Consensus 384 ~~~L~~~~~~~~~~~---~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~~~~~lR~~~~ 459 (486)
+..|+++ |+++... ..++.+.-.-.|... .-+.+...+..++.+.+++.- .-...++||.++
T Consensus 295 ~~~l~~~-GLq~fv~~e~~rlptvttv~vp~gv-------------Dw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~ 360 (385)
T KOG2862|consen 295 KLSLEAL-GLQLFVVDEELRLPTVTTVKVPYGV-------------DWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLL 360 (385)
T ss_pred HHHHHHh-CccceecChhhccCcceeeecCCCC-------------CHHHHHHHHHHhcCEEeccccCCCcccEEEEEEe
Confidence 9999997 7876542 233443332223221 123556666677765555431 112558999998
Q ss_pred CCCCcHHHHHHHHHHHHHHHHH
Q 038818 460 ATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 460 ~~~tt~~did~~i~~l~~~~~~ 481 (486)
.-+.+.+.|++.++.|+..+++
T Consensus 361 gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 361 GCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred eccCCcHHHHHHHHHHHHHHhh
Confidence 8888888999999999887754
No 105
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.86 E-value=1.3e-18 Score=174.63 Aligned_cols=308 Identities=11% Similarity=0.059 Sum_probs=191.1
Q ss_pred HHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCC
Q 038818 115 ENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGI 194 (486)
Q Consensus 115 e~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~ 194 (486)
..++.+.+++++|.++ .+++++|+.++..++.+... +++.|++++..|.|+..++...+.
T Consensus 45 ~~~LE~~lA~~~g~e~---------al~~~sG~~a~~~~i~~l~~-----------~GD~Vl~~~~~h~s~~~~~~l~~~ 104 (392)
T PLN03227 45 HLELEQCMAEFLGTES---------AILYSDGASTTSSTVAAFAK-----------RGDLLVVDRGVNEALLVGVSLSRA 104 (392)
T ss_pred HHHHHHHHHHHhCCCc---------EEEecCcHHHHHHHHHHhCC-----------CCCEEEEeccccHHHHHHHHHcCC
Confidence 3445566888888763 47777778888766655432 788899999999999998888877
Q ss_pred CCCCeEEEecCCCCCcccCHHHHHHHHHHHHH--------CCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEee
Q 038818 195 DPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQ--------AGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVD 266 (486)
Q Consensus 195 g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~--------~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD 266 (486)
+++.++.+ |++++++.++.... ....+.+|++...++++|.+.|+++|.++|++||+++++|
T Consensus 105 ---~~~~~~~~-------d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livD 174 (392)
T PLN03227 105 ---NVRWFRHN-------DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILD 174 (392)
T ss_pred ---eEEEeCCC-------CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEE
Confidence 77777643 55666665543221 1123567888889999999999999999999999999999
Q ss_pred ccccchhccCccchhh-----hcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcC-CcccccCccCCCCCccC
Q 038818 267 AAYAGSACICPEFRHF-----IDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALST-NPEFLRNKASDSKQVVD 340 (486)
Q Consensus 267 ~a~g~~~~~~~~~~~~-----~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~ 340 (486)
++|+.+.. .+..+.. +....++|.++.+.+|.++ |. .|++..+ ++... .+.. ...+.++
T Consensus 175 e~~~~g~~-g~~G~g~~~~~g~~p~~~~Div~~slsk~~g-~~-gg~v~~~-~~~~~-~~~~~~~~~~~~---------- 239 (392)
T PLN03227 175 ESFSFGTL-GKSGRGSLEHAGLKPMVHAEIVTFSLENAFG-SV-GGMTVGS-EEVVD-HQRLSGSGYCFS---------- 239 (392)
T ss_pred Cccccccc-CCCCCcHHHHcCCCCCCCceEEEeechhhhh-cc-CcEEecC-HHHHH-HHHHhCcCcccc----------
Confidence 99973322 1111111 1112468999999999876 32 3444444 33221 2211 1111111
Q ss_pred CCCccccCCCCCCchHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHhCCCCeE----------EecCCCeeEEEEEee
Q 038818 341 YKDWQITLSRRFRALKLWLVLRSF-GVANLRNFLRSHVRMAQLFQELVGGDNRFE----------IVAPRNFAVVCFRVL 409 (486)
Q Consensus 341 ~~~~~~~~sr~~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~----------~~~~~~~~~v~f~~~ 409 (486)
. ...++.+|+++..+ .....+++.++..+++++|++.|++. ++. +...+.++++.+.+.
T Consensus 240 -------~--~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~rg~~~~~~~~~~~i~~i~~~ 309 (392)
T PLN03227 240 -------A--SAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNS-SHPYALKLRNRLVITSDPISPIIYLRLS 309 (392)
T ss_pred -------C--CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-CCccccccccccccCCCCCCCEEEEEeC
Confidence 1 11123334444322 11123467888899999999999752 222 122345677888775
Q ss_pred cCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeee-------eECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 410 PSASGLGDGKANEGANELNRKLLESINASGQLYVSHG-------MVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-------~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
+.... ..........++.+.+.++|++..... ..-....+|++++ ...|++|||++++.|+++++++
T Consensus 310 ~~~~~-----~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~-~~~t~eei~~~~~~l~~~~~~~ 383 (392)
T PLN03227 310 DQEAT-----RRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVAN-ASHTREDIDKLLTVLGEAVEAI 383 (392)
T ss_pred CHHHh-----hhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEec-CCCCHHHHHHHHHHHHHHHHHH
Confidence 32100 000001233577888888998543211 1123467999995 5777779999999999998776
Q ss_pred h
Q 038818 483 L 483 (486)
Q Consensus 483 ~ 483 (486)
.
T Consensus 384 ~ 384 (392)
T PLN03227 384 L 384 (392)
T ss_pred H
Confidence 4
No 106
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.86 E-value=4e-19 Score=180.60 Aligned_cols=338 Identities=10% Similarity=0.062 Sum_probs=214.7
Q ss_pred HHHHHHhhcCCC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcccc
Q 038818 90 LGEMLSSGFNVV-GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRE 168 (486)
Q Consensus 90 ~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~ 168 (486)
+.+.+...+..+ ...|.......++.+.+.+++.+..|.+-+ ...+++|+|+++|+..++.+..+
T Consensus 74 ~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~-----~~~v~it~G~~~al~l~~~~l~~--------- 139 (430)
T PLN00145 74 AEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELS-----TDDIYLTAGCAQAIEIIMSVLAQ--------- 139 (430)
T ss_pred HHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCC-----hhhEEEeCCHHHHHHHHHHHhcC---------
Confidence 344444444322 235555556778888888888877766432 13789999999998877666532
Q ss_pred CCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC
Q 038818 169 NISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP 248 (486)
Q Consensus 169 ~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp 248 (486)
+++.|+++..++..+...+...|+ +++.+++.+..+|.+|+++|++++++.+ .+++++.++|+||.+-|
T Consensus 140 --~Gd~Vlv~~P~y~~y~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~i~i~~P~NPtG~v~~ 208 (430)
T PLN00145 140 --PGANILLPRPGYPLYEARAVFSGL---EVRHFDLLPERGWEVDLEGVEALADENT------VAMVIINPNNPCGSVYS 208 (430)
T ss_pred --CCCEEEEcCCCCccHHHHHHHcCC---EEEEeeCCcccCCcCCHHHHHHHhCcCc------eEEEEeCCCCCCCCCCC
Confidence 667788899999888888999999 9999987654568999999999886643 37888889999999987
Q ss_pred ---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCC-CC-ceeeccccccCCC-CcceEEEeeCch-HHHHH-
Q 038818 249 ---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEG-AD-SFSLNAHKWFFTT-LDCCCLWVKNPN-ALIKA- 320 (486)
Q Consensus 249 ---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~-aD-si~~~~hK~l~~p-~~~g~~~~~~~~-~~~~~- 320 (486)
+++|+++|+++|+++++|++|..+......+... ..+.. .. .+..+..|.+..| .-+|+++..++. .+...
T Consensus 209 ~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~-~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~ 287 (430)
T PLN00145 209 YEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPM-GVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETK 287 (430)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccch-hhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhH
Confidence 8889999999999999999997643211111111 11111 12 3345578996544 578998875432 11100
Q ss_pred -hcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe
Q 038818 321 -LSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF---GVANLRNFLRSHVRMAQLFQELVGGDNRFEIV 396 (486)
Q Consensus 321 -~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 396 (486)
......+.. .+-....+..++....+ ..+.+++..+...+.++.+.+.|++++++.+.
T Consensus 288 ~~~~~~~~~~------------------~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~ 349 (430)
T PLN00145 288 VVDSIRNYLN------------------ISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCP 349 (430)
T ss_pred HHHHHHHHhc------------------ccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 000000100 00001122223332333 23567788888888999999999998888765
Q ss_pred cCCCeeEEEE-EeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHH
Q 038818 397 APRNFAVVCF-RVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKV 474 (486)
Q Consensus 397 ~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~ 474 (486)
..|+..++.| ++..... .... ....+..++. +.|+++..+..+...+++|+++. .+++++++.++.
T Consensus 350 ~~P~ga~y~~v~l~~~~~--------~~~~-~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~---~~~~~l~~al~r 417 (430)
T PLN00145 350 HKPEGSMFVMVKLDLSCL--------SGIK-DDMDFCCKLAKEESVVVLPGSALGMKNWLRITFA---IDPPSLEDGLER 417 (430)
T ss_pred cCCCeeeEEEeccChhhc--------CCCC-CHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeC---CCHHHHHHHHHH
Confidence 4455554443 3432100 0000 0123444443 55776555555555789999995 257789999999
Q ss_pred HHHHHHHHh
Q 038818 475 VQEKLDGIL 483 (486)
Q Consensus 475 l~~~~~~l~ 483 (486)
|.+.+++-.
T Consensus 418 l~~~~~~~~ 426 (430)
T PLN00145 418 LKSFCLRHA 426 (430)
T ss_pred HHHHHHHhc
Confidence 988876544
No 107
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.86 E-value=4.1e-20 Score=183.35 Aligned_cols=310 Identities=13% Similarity=0.023 Sum_probs=195.8
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEc-CCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH
Q 038818 106 MSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQ-GTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA 184 (486)
Q Consensus 106 ~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t-~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s 184 (486)
..++.+.++-+++++.+++++|.++++ ..+|+ +|||.++..++..... ++ .++++.-.|.+
T Consensus 34 hr~~~f~~~~~~~r~~l~~l~~~~~~~------~v~f~~gs~T~a~~~~~~~l~~-----------~~-~l~i~~G~~~~ 95 (361)
T TIGR01366 34 HRQAPVKNLVGRVREGLAELFSLPDGY------EVILGNGGATAFWDAATFGLIE-----------KK-SLHLSFGEFSS 95 (361)
T ss_pred cCChHHHHHHHHHHHHHHHHhCCCCCc------eEEEECCchhHHHHHHHHhccc-----------cc-ccEEecCHHHH
Confidence 345677888889999999999996542 56664 6699888766654421 12 22233334433
Q ss_pred -HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceE
Q 038818 185 -LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWV 263 (486)
Q Consensus 185 -~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~l 263 (486)
+.+.+....... ++..+++++.+ .++. .+.+ .+.+|++++++|.+|.+.|+++| ++++|+++
T Consensus 96 ~~~~~a~~~~~~~-~~~~~~~~~~~--~~~~-----~~~~------~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~ 158 (361)
T TIGR01366 96 KFAKAVKLAPWLG-EPIIVTADPGS--APEP-----QADP------GVDVIAWAHNETSTGVAVPVRRP---EGSDDALV 158 (361)
T ss_pred HHHHHHHhhhccC-CceEEecCCCC--CCCC-----ccCC------CCCEEEEcccCCccceecccccc---cccCCCeE
Confidence 455555532211 56777766422 3333 2222 24589999999999999999998 58999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCC------cccccCccCCCCC
Q 038818 264 HVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTN------PEFLRNKASDSKQ 337 (486)
Q Consensus 264 hvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~------~~y~~~~~~~~~~ 337 (486)
+||++++.+....+- +.+|.+++++||++++|.|.++++++++.. .+..... +.|+....
T Consensus 159 iVDavqs~g~~~idv--------~~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~-~~~~~~~~~~~~~p~~~d~~~----- 224 (361)
T TIGR01366 159 VIDATSGAGGLPVDI--------AETDVYYFAPQKNFASDGGLWLAIMSPAAL-ERIEAIAASGRWVPEFLSLPT----- 224 (361)
T ss_pred EEEcCccccCCCCCH--------HHCCEEEEEchhhcCCCCceEEEEECHHHH-hhhhcccCCCCCCchhhhHHH-----
Confidence 999999887765541 248999999999999998877777777643 2221110 11211100
Q ss_pred ccCCCCccccCCCCC--C---chHHHHHHHHhchH-HHHHHHHHHHHHHHHHHHHHhCCCCeEEecC-C--CeeE-EEEE
Q 038818 338 VVDYKDWQITLSRRF--R---ALKLWLVLRSFGVA-NLRNFLRSHVRMAQLFQELVGGDNRFEIVAP-R--NFAV-VCFR 407 (486)
Q Consensus 338 ~~~~~~~~~~~sr~~--~---~l~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~--~~~~-v~f~ 407 (486)
......+.+... . .+++..+++.+-.+ |++.+.++..++++++++.|.+.+.++++.. + .++. .++.
T Consensus 225 ---~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~ 301 (361)
T TIGR01366 225 ---AVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTID 301 (361)
T ss_pred ---HHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEE
Confidence 000001111111 1 13556677777666 6888899999999999999999976776532 2 1222 2344
Q ss_pred eecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 408 VLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
+. .+ .....+.+.|.++|+....+...-+...+|+++++ ++|++||++++++|++++++|
T Consensus 302 ~~-~g-------------~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~-~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 302 FV-DD-------------IDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFP-AIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred CC-Cc-------------cCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCC-CCCHHHHHHHHHHHHHHHhhC
Confidence 42 21 11235666676678754322211124579999975 778889999999999988764
No 108
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.86 E-value=8e-19 Score=176.75 Aligned_cols=333 Identities=14% Similarity=0.096 Sum_probs=212.3
Q ss_pred HHHHHHHHHhhcC-CCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHc
Q 038818 87 AGFLGEMLSSGFN-VVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEI 165 (486)
Q Consensus 87 ~~~~~~~l~~~~n-~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~ 165 (486)
+..+.+.+...+. .....|....+...+.+.+.+++++.+|.+... ....++|+|+++++..++.....
T Consensus 42 ~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~----~~~i~~t~G~~~~l~~~~~~~~~------ 111 (389)
T PRK05957 42 PPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNN----EQAIVVTAGSNMAFMNAILAITD------ 111 (389)
T ss_pred CHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCeEEEeCChHHHHHHHHHHhcC------
Confidence 3344555555443 222356555566788889999999999974210 02688999998888766655432
Q ss_pred cccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 166 GRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 166 ~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
+++.|+++...|......++..|+ +++.+|.+. ++.+|+++|++++++. +.+|+++.++|+||.
T Consensus 112 -----~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~------~klv~~~~p~NPtG~ 175 (389)
T PRK05957 112 -----PGDEIILNTPYYFNHEMAITMAGC---QPILVPTDD--NYQLQPEAIEQAITPK------TRAIVTISPNNPTGV 175 (389)
T ss_pred -----CCCEEEEeCCCCcCHHHHHHhcCC---EEEEeecCC--CCCcCHHHHHHhcCcC------ceEEEEeCCCCCCCc
Confidence 567788888888777777888899 999999874 5789999999998653 347788889999999
Q ss_pred cCC---chHHHHHHHHhCceEEeeccccchhccCccchhhhc--CCCCCCceeeccccccCCC-CcceEEEeeCchHHHH
Q 038818 246 VDP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFID--GIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIK 319 (486)
Q Consensus 246 idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~--~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~ 319 (486)
+-| +++|+++|++||+++++|++|+.+............ ....-..+..+..|.++.| .-+|+++..++ ...
T Consensus 176 ~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~-~~~- 253 (389)
T PRK05957 176 VYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIH-LLE- 253 (389)
T ss_pred CcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCHH-HHH-
Confidence 977 899999999999999999999755332111111111 1111124456678988644 35888887543 322
Q ss_pred HhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEec
Q 038818 320 ALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVA 397 (486)
Q Consensus 320 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 397 (486)
.+.....+... ....+....+...+ +.+.+++..++..++++++.+.|++++++..+.
T Consensus 254 ~~~~~~~~~~~--------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ 313 (389)
T PRK05957 254 AIKKIQDTILI--------------------CPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLH 313 (389)
T ss_pred HHHHHHhhccc--------------------CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc
Confidence 22111000000 01122333333333 344567777888888999999998877642234
Q ss_pred CCCeeEEEE-EeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHH
Q 038818 398 PRNFAVVCF-RVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWK 473 (486)
Q Consensus 398 ~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~ 473 (486)
++..+.+++ ++.+.. + ..++.+.+. +.|+.+.++..+. +.+++|+++.. .+++++++.++
T Consensus 314 ~~~gg~~~~~~~~~~~------------~--~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~--~~~~~l~~~~~ 377 (389)
T PRK05957 314 PANGAFYCFLKVNTDL------------N--DFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGA--LQKATAKEGIE 377 (389)
T ss_pred CCCeeEEEEEeCCCCC------------C--hHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEec--CCHHHHHHHHH
Confidence 566555443 443210 1 235666665 4677554443332 24689999953 35668888888
Q ss_pred HHHHHHHHHh
Q 038818 474 VVQEKLDGIL 483 (486)
Q Consensus 474 ~l~~~~~~l~ 483 (486)
.|.+.++++.
T Consensus 378 ~l~~~~~~~~ 387 (389)
T PRK05957 378 RLVQGLKTIV 387 (389)
T ss_pred HHHHHHHhhh
Confidence 8888877654
No 109
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.85 E-value=7.5e-19 Score=177.61 Aligned_cols=326 Identities=11% Similarity=0.047 Sum_probs=208.9
Q ss_pred HHHHHHHHHhhcCCC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHc
Q 038818 87 AGFLGEMLSSGFNVV-GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEI 165 (486)
Q Consensus 87 ~~~~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~ 165 (486)
+..+.+.+...++.. ...|. .++...+.+.+.+|+.+..|.+.+. ....++|+|+++++..++.+...
T Consensus 47 ~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~----~~~I~it~G~~~al~~~~~~~~~------ 115 (399)
T PRK07681 47 ADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILNA----DKEVLLLMGSQDGLVHLPMVYAN------ 115 (399)
T ss_pred CHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCC----CCeEEECCCcHHHHHHHHHHhCC------
Confidence 344566665555432 22232 2456788888999999888864320 02688999999988766555433
Q ss_pred cccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 166 GRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 166 ~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
+++.|+++..+|..+...++.+|+ +++.+|+++++.+.+|+++|++++.+. +.+|+++.++||||.
T Consensus 116 -----~Gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~v~l~~P~NPTG~ 181 (399)
T PRK07681 116 -----PGDIILVPDPGYTAYETGIQMAGA---TSYYMPLKKENDFLPDLELIPEEIADK------AKMMILNFPGNPVPA 181 (399)
T ss_pred -----CCCEEEECCCCccchHHHHHhcCC---EEEEEecCCCCCCcCCHHHHHHhcccc------ceEEEEeCCCCCcCc
Confidence 677888999999999999999999 999999986555789999999888643 347888889999999
Q ss_pred cCC---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCC---CCCceeeccccccC-CCCcceEEEeeCchHHH
Q 038818 246 VDP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIE---GADSFSLNAHKWFF-TTLDCCCLWVKNPNALI 318 (486)
Q Consensus 246 idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~---~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~ 318 (486)
+-+ +++|+++|++||+|+++|.+|+.+........... .+. .-..+..++.|.++ ...-+|+++.. +....
T Consensus 182 ~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~-~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~-~~l~~ 259 (399)
T PRK07681 182 MAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFL-SVPGAKEVGVEINSLSKSYSLAGSRIGYMIGN-EEIVR 259 (399)
T ss_pred CCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChh-hCCCCcccEEEEeecccccCCccceeEEEecC-HHHHH
Confidence 976 78899999999999999999976543211111111 111 12244567899997 44568888753 43332
Q ss_pred HHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe
Q 038818 319 KALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIV 396 (486)
Q Consensus 319 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 396 (486)
.+.....+... ....+..+++...+ +.+.+++..+...++.+++.+.|++. ++++.
T Consensus 260 -~~~~~~~~~~~--------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 317 (399)
T PRK07681 260 -ALTQFKSNTDY--------------------GVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTF-GWNVD 317 (399)
T ss_pred -HHHHHHhhccc--------------------CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc
Confidence 22111000000 01122223333333 33456666777778888899999887 77765
Q ss_pred cCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHh-cCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHH
Q 038818 397 APRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINA-SGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWK 473 (486)
Q Consensus 397 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~ 473 (486)
.+.....+.+++.+.. ...++.+.+.+ .|+.+.++..+. +.+++|+++. .++++++++++
T Consensus 318 ~p~~g~f~~~~l~~~~--------------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~---~~~~~~~~~l~ 380 (399)
T PRK07681 318 KPAGSMFVWAEIPKGW--------------TSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALV---QDEEVLQQAVE 380 (399)
T ss_pred CCCeeeEEEEECCCCC--------------CHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEec---CCHHHHHHHHH
Confidence 4443334444443210 12345666655 677544443332 3468999996 25679999999
Q ss_pred HHHHH
Q 038818 474 VVQEK 478 (486)
Q Consensus 474 ~l~~~ 478 (486)
.|++.
T Consensus 381 ~l~~~ 385 (399)
T PRK07681 381 NIRNS 385 (399)
T ss_pred HHHHh
Confidence 99884
No 110
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.85 E-value=2.8e-19 Score=173.36 Aligned_cols=333 Identities=17% Similarity=0.131 Sum_probs=218.0
Q ss_pred HHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCC
Q 038818 91 GEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENI 170 (486)
Q Consensus 91 ~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~ 170 (486)
.+.+...+..+- ...||...++|++ +++.+|.+. ++.+++||.|+..||.+.--.
T Consensus 18 ~~~v~~vl~sg~--i~~G~~v~~FE~~----~ae~~G~k~---------ava~~sgT~AL~laL~al~ig---------- 72 (374)
T COG0399 18 LAAVQEVLKSGW--LTGGPFVRRFEQA----FAEYLGVKY---------AVAVSSGTAALHLALLALAIG---------- 72 (374)
T ss_pred HHHHHHHHHcCC--eecChHHHHHHHH----HHHHhCCCe---------EEEecChHHHHHHHHHhcCCC----------
Confidence 344444554432 2347888888864 778888764 588999999999988854311
Q ss_pred CCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCch
Q 038818 171 SRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLG 250 (486)
Q Consensus 171 ~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~ 250 (486)
+++.|+++..+..+-..++-+.|. ++++|++|++ ++.||++.||++|.+.++ .|+.++ ..|...+++
T Consensus 73 ~GDeVI~ps~TfvATan~i~~~Ga---~PVFvDid~~-T~nid~~~ie~aIt~~tK------AIipVh---l~G~~~dm~ 139 (374)
T COG0399 73 PGDEVIVPSFTFVATANAVLLVGA---KPVFVDIDPD-TLNIDPDLIEAAITPRTK------AIIPVH---LAGQPCDMD 139 (374)
T ss_pred CCCEEEecCCchHHHHHHHHHcCC---eEEEEecCCc-ccCCCHHHHHHHcccCCe------EEEEeh---hccCCCCHH
Confidence 788999999999999999999999 9999999974 689999999999998754 566554 478889999
Q ss_pred HHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccC
Q 038818 251 PLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRN 330 (486)
Q Consensus 251 ~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~ 330 (486)
+|.+||++||++++.|+|++.+...-.+. .-.+..+-+++|.+.|.+.+. ..|+++++|++...+.......-...
T Consensus 140 ~i~~la~~~~l~vIEDaAqa~Ga~y~gk~---vGt~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~lr~hG~~~ 215 (374)
T COG0399 140 AIMALAKRHGLPVIEDAAQAHGATYKGKK---VGSFGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSLRNHGLSR 215 (374)
T ss_pred HHHHHHHHcCCeEEEEcchhccCeecCcc---cccccceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHHHHHhCcCC
Confidence 99999999999999999997765432221 112335667888899999876 78888888887765433211100000
Q ss_pred ccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeec
Q 038818 331 KASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLP 410 (486)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~ 410 (486)
. ..+.+ +....|-..+--.+-+++.....+.++++.++..++++++.+.|++++++.+..++....-.+....
T Consensus 216 ~-----~~~~y--~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~ 288 (374)
T COG0399 216 D-----AVFKY--LHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYT 288 (374)
T ss_pred C-----ccccc--eeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeE
Confidence 0 00011 1122222222222233333333478899999999999999999999987766544433222222221
Q ss_pred CCCCCCCCCCccchHHHHHHHHHHHHhcCcE---EEeeee---------------E-----CCEeEEEEEecCCCCcHHH
Q 038818 411 SASGLGDGKANEGANELNRKLLESINASGQL---YVSHGM---------------V-----AGIYFIRFAVGATLTEDRH 467 (486)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~---~~~~~~---------------~-----~~~~~lR~~~~~~~tt~~d 467 (486)
...+ .+ ......+.+.|.+.|+. +..|.. + .....+.+= ++|..+++|
T Consensus 289 i~~~------~~--~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP-~~p~l~~~~ 359 (374)
T COG0399 289 ILVD------EE--GISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLP-LHPNLSEED 359 (374)
T ss_pred EEec------CC--CCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEcc-CCCCCCHHH
Confidence 1100 00 11234567777777653 111100 0 012345544 479999999
Q ss_pred HHHHHHHHHHHHHH
Q 038818 468 VIAAWKVVQEKLDG 481 (486)
Q Consensus 468 id~~i~~l~~~~~~ 481 (486)
+++++++|+++...
T Consensus 360 ~~~V~~~l~~~~~~ 373 (374)
T COG0399 360 VDRVIEALKEVLGS 373 (374)
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999988653
No 111
>PLN00175 aminotransferase family protein; Provisional
Probab=99.85 E-value=5.4e-19 Score=178.94 Aligned_cols=329 Identities=13% Similarity=0.109 Sum_probs=216.5
Q ss_pred HHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcc
Q 038818 87 AGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIG 166 (486)
Q Consensus 87 ~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 166 (486)
+..+.+.+...+......|....+..++.+.+.+++.+.+|.+-+. ....++|+|+++|+..++.+..+
T Consensus 69 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~----~~~I~vt~G~~~al~~~~~~l~~------- 137 (413)
T PLN00175 69 PDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDP----EKEVTVTSGCTEAIAATILGLIN------- 137 (413)
T ss_pred CHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCCEEEeCCHHHHHHHHHHHhCC-------
Confidence 3445566555554433567666677899999999999988864321 01588899999988766665432
Q ss_pred ccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 167 RENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 167 ~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
+++.|++.+..|..+...++..|. +++.+|++++ ++.+|+++|++++.+.+ .+|+++.++|++|.+
T Consensus 138 ----~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~-~~~~~~~~l~~~~~~~~------k~i~i~~p~NPtG~~ 203 (413)
T PLN00175 138 ----PGDEVILFAPFYDSYEATLSMAGA---KIKTVTLRPP-DFAVPEDELKAAFTSKT------RAILINTPHNPTGKM 203 (413)
T ss_pred ----CCCEEEEeCCCchhHHHHHHHcCC---EEEEEECCcc-cCCCCHHHHHHhcCcCc------eEEEecCCCCCCCcC
Confidence 677788888999999999999999 9999999753 47999999999886533 467888999999998
Q ss_pred C---CchHHHHHHHHhCceEEeeccccchhccCccchhh--hcCCCCCCceeeccccccCC-CCcceEEEeeCchHHHHH
Q 038818 247 D---PLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHF--IDGIEGADSFSLNAHKWFFT-TLDCCCLWVKNPNALIKA 320 (486)
Q Consensus 247 d---pl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~~~~~~~~~~ 320 (486)
- ++++|+++|++||+|+++|++|.....- +..... +.+...-..+..++.|.++. ..-+|+++..++ ....
T Consensus 204 ~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~-~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~-l~~~- 280 (413)
T PLN00175 204 FTREELELIASLCKENDVLAFTDEVYDKLAFE-GDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH-LTWG- 280 (413)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEecccCccccC-CcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHH-HHHH-
Confidence 5 5788999999999999999999765431 111111 11111223456778999984 456788776543 3221
Q ss_pred hcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC
Q 038818 321 LSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP 398 (486)
Q Consensus 321 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 398 (486)
+.....+.. .....+..+++.+.+ +...+++..++..+.++.+.+.|++. ++++. +
T Consensus 281 l~~~~~~~~--------------------~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~ 338 (413)
T PLN00175 281 VRQAHSFLT--------------------FATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEV-GFKVY-P 338 (413)
T ss_pred HHHHHhhcc--------------------CCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeec-C
Confidence 111100100 011222333333333 34557777888888999999999887 78765 4
Q ss_pred CCeeEEEE-EeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC-----CEeEEEEEecCCCCcHHHHHHH
Q 038818 399 RNFAVVCF-RVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA-----GIYFIRFAVGATLTEDRHVIAA 471 (486)
Q Consensus 399 ~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~-----~~~~lR~~~~~~~tt~~did~~ 471 (486)
|..+.+.| ++.+... . ...++.+.+. ++|+.+.++..+. +..++|++++. +++++++.
T Consensus 339 p~g~~f~~~~~~~~~~--------~----~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~---~~e~l~~~ 403 (413)
T PLN00175 339 SSGTYFVMVDHTPFGF--------E----NDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK---DEETLRAA 403 (413)
T ss_pred CCeeEEEEEeccccCC--------C----CHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC---CHHHHHHH
Confidence 55554433 4332110 0 1235666665 4587666554431 35689999952 57799999
Q ss_pred HHHHHHHHH
Q 038818 472 WKVVQEKLD 480 (486)
Q Consensus 472 i~~l~~~~~ 480 (486)
++.|.++++
T Consensus 404 ~~rL~~~~~ 412 (413)
T PLN00175 404 VERMKTKLK 412 (413)
T ss_pred HHHHHHHHh
Confidence 999988764
No 112
>PLN02231 alanine transaminase
Probab=99.85 E-value=3.6e-18 Score=176.77 Aligned_cols=336 Identities=12% Similarity=0.106 Sum_probs=218.0
Q ss_pred ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCC
Q 038818 102 GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQT 181 (486)
Q Consensus 102 ~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~ 181 (486)
...|..+.+..++.+.+.+|+.+..|++.+ ..++++|+|+++++..++.+.... +++.|+++...
T Consensus 161 ~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~-----pe~I~iT~Ga~~ai~~~~~~l~~~----------~gd~Vli~~P~ 225 (534)
T PLN02231 161 TGAYSHSQGIKGLRDAIAAGIEARDGFPAD-----PNDIFLTDGASPAVHMMMQLLIRS----------EKDGILCPIPQ 225 (534)
T ss_pred ccCcCCCCCcHHHHHHHHHHHHhccCCCCC-----cccEEEeCCHHHHHHHHHHHhccC----------CCCEEEEeCCC
Confidence 356777778889999999999998887543 137999999999988777765431 46778889999
Q ss_pred chHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC---CchHHHHHHHH
Q 038818 182 HSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD---PLGPLCDIAKR 258 (486)
Q Consensus 182 H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id---pl~~I~~i~~~ 258 (486)
+.....+++..|. +++.++++++++|.+|+++|++++++...++..+.+++++.++||||.+- .+++|+++|++
T Consensus 226 Y~~y~~~~~~~g~---~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~ 302 (534)
T PLN02231 226 YPLYSASIALHGG---TLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQ 302 (534)
T ss_pred ChhHHHHHHHcCC---EEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 9999999999999 99999998755689999999999987655554566777889999999984 57889999999
Q ss_pred hCceEEeeccccchhccC-cc---chhhhc--CC--CCCCceee-ccccccC--CCCcceEEEee--CchHHHHHhcCCc
Q 038818 259 YSIWVHVDAAYAGSACIC-PE---FRHFID--GI--EGADSFSL-NAHKWFF--TTLDCCCLWVK--NPNALIKALSTNP 325 (486)
Q Consensus 259 ~g~~lhvD~a~g~~~~~~-~~---~~~~~~--~~--~~aDsi~~-~~hK~l~--~p~~~g~~~~~--~~~~~~~~~~~~~ 325 (486)
||+++++|.+|....+.. .. +..... +. .....+++ +..|.++ +..-+|++.+. +++..........
T Consensus 303 ~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~ 382 (534)
T PLN02231 303 EGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVAS 382 (534)
T ss_pred cCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHHHHHHh
Confidence 999999999997654311 11 111111 11 01124444 7899653 45678888763 3443332211110
Q ss_pred ccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh-----chHHH-------HHHHHHHHHHHHHHHHHHhCCCCe
Q 038818 326 EFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF-----GVANL-------RNFLRSHVRMAQLFQELVGGDNRF 393 (486)
Q Consensus 326 ~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~-----g~~g~-------~~~~~~~~~~a~~l~~~L~~~~~~ 393 (486)
.. .|+ ..+...++...+ |...+ .++.+...+.++.+.+.|++++++
T Consensus 383 --~~-----------------~~s---~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi 440 (534)
T PLN02231 383 --VN-----------------LCS---NISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGV 440 (534)
T ss_pred --hh-----------------cCC---ChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 00 011 111122222222 11222 234566778888999999998888
Q ss_pred EEecCCCeeEEEE-Eee-cCCCCCCCCCCccchH-HHHHHHHHHHH-hcCcEEEeeeeEC---CEeEEEEEecCCCCcHH
Q 038818 394 EIVAPRNFAVVCF-RVL-PSASGLGDGKANEGAN-ELNRKLLESIN-ASGQLYVSHGMVA---GIYFIRFAVGATLTEDR 466 (486)
Q Consensus 394 ~~~~~~~~~~v~f-~~~-~~~~~~~~~~~~~~~~-~~~~~l~~~l~-~~g~~~~~~~~~~---~~~~lR~~~~~~~tt~~ 466 (486)
++. +|+.+++.| ++. +... .+ ..+..+ .....+...+. +.|+.++++..+. +..++|+++. ++++
T Consensus 441 ~~~-~p~Ggfylw~~l~lp~~~--~~--~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~---~~~e 512 (534)
T PLN02231 441 TCN-KAEGAMYLFPRIHLPQKA--IK--AAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTIL---PQED 512 (534)
T ss_pred eec-CCCeeeEEeccccCcHHH--HH--HHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeC---CCHH
Confidence 865 667777777 332 1100 00 000000 00123344444 5687666655553 3457999983 4778
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q 038818 467 HVIAAWKVVQEKLDGILAT 485 (486)
Q Consensus 467 did~~i~~l~~~~~~l~~~ 485 (486)
+++..++.|.+..++++++
T Consensus 513 ~l~eal~RL~~~~~~~~~~ 531 (534)
T PLN02231 513 KIPAIVSRLTEFHKSFMDE 531 (534)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999988887653
No 113
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.85 E-value=1.4e-18 Score=176.04 Aligned_cols=340 Identities=12% Similarity=0.082 Sum_probs=207.0
Q ss_pred CCCCCCcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHH
Q 038818 70 HWQSPYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEA 149 (486)
Q Consensus 70 ~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a 149 (486)
.+.+..|+|.... +.....+.+.+..+ +.+...............++.+.+++++|.+ ..+++++|++|
T Consensus 49 ~~~sn~ylgl~~~-p~v~~a~~~~~~~~-~~~~~~s~~~~~~~~~~~~le~~la~~~g~~---------~~~~~~SG~~A 117 (406)
T PRK13393 49 VWCSNDYLGMGQH-PAVLAAMHEALDTC-GAGAGGTRNISGTNHYHVLLEAELADLHGKE---------AALLFTSGYVS 117 (406)
T ss_pred EeecccccCCCCC-HHHHHHHHHHHHHc-CCCCcccccccCChHHHHHHHHHHHHHhCCC---------cEEEeCCcHHH
Confidence 3456678887543 23333344444432 2111111110112334556667888888864 35677777889
Q ss_pred HHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCC
Q 038818 150 ILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGL 229 (486)
Q Consensus 150 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~ 229 (486)
|..++...... .++.+|+++...|.++..+++..|. +++.++. .|++++++.++... ..
T Consensus 118 n~~ai~~l~~~---------~~g~~I~~~~~~H~s~~~~~~~~g~---~~~~~~~-------~d~~~l~~~l~~~~--~~ 176 (406)
T PRK13393 118 NWAALSTLGSR---------LPGCVILSDELNHASMIEGIRHSRA---EKRIFRH-------NDPADLERKLSDLD--PH 176 (406)
T ss_pred HHHHHHHhhcC---------CCCCEEEEccchhHHHHHHHHHcCC---eEEEeCC-------CCHHHHHHHHHhcc--CC
Confidence 98888753221 0456788888899999999888887 7777763 37888888876431 12
Q ss_pred ccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhh--hcCC-CCCCceeeccccccCCCCcc
Q 038818 230 IPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHF--IDGI-EGADSFSLNAHKWFFTTLDC 306 (486)
Q Consensus 230 ~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~--~~~~-~~aDsi~~~~hK~l~~p~~~ 306 (486)
.+.+|+++.+++++|.+.|+++|.++|+++|+++++|++|+.+.+ .+..... ..++ +..|.+..++.|.++.+.
T Consensus 177 ~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~-g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G-- 253 (406)
T PRK13393 177 RPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLY-GPRGGGIAEREGLADRLTIIEGTLAKAFGVMG-- 253 (406)
T ss_pred CCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCcccccc-CCCCCchhhhcCCCCCCeEEEEeCchhhcccC--
Confidence 345788889999999999999999999999999999999974432 1111111 1122 245777778999998642
Q ss_pred eEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC-CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Q 038818 307 CCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR-FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQE 385 (486)
Q Consensus 307 g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~ 385 (486)
|+++. ++...........+|.+. .+.. ....++..++..+-..+ ...++..++++++++
T Consensus 254 G~~~~-~~~~~~~l~~~~~~~~~t-----------------~~~~p~~~aa~~aaL~~~~~~~--~~~~~~~~~~~~l~~ 313 (406)
T PRK13393 254 GYITG-SAALCDFIRSFASGFIFT-----------------TSLPPAVAAGALASVRHLKASS--AERERHQDRVARLRA 313 (406)
T ss_pred ceeeC-CHHHHHHHHHhCcCceec-----------------CccCHHHHHHHHHHHHHHhhCH--HHHHHHHHHHHHHHH
Confidence 55543 333322211111122111 1111 11233344454432222 223556788999999
Q ss_pred HHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHh-cCcEEEee----eeECCEeEEEEEecC
Q 038818 386 LVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINA-SGQLYVSH----GMVAGIYFIRFAVGA 460 (486)
Q Consensus 386 ~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~----~~~~~~~~lR~~~~~ 460 (486)
.|++. +++++ ++..+++.+.+.. .....++.+.|.+ .|++ +.+ +...+...+|+++ +
T Consensus 314 ~L~~~-g~~~~-~~~~~i~~v~~~~--------------~~~~~~l~~~L~~~~Gi~-v~~~~~p~~p~g~~~iRis~-~ 375 (406)
T PRK13393 314 RLDKA-GIPHL-PNPSHIVPVMVGD--------------PVLCKQISDELLDRYGIY-VQPINYPTVPRGTERLRITP-S 375 (406)
T ss_pred HHHHc-CCCcC-CCCCCeEEEEeCC--------------HHHHHHHHHHHHHhCCEE-EEeECCCCCCCCCceEEEEE-C
Confidence 99876 67655 4455676665421 1234567777776 4764 332 2223557899998 4
Q ss_pred CCCcHHHHHHHHHHHHHHHHHH
Q 038818 461 TLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 461 ~~tt~~did~~i~~l~~~~~~l 482 (486)
...|++|||+++++|+++.+++
T Consensus 376 ~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 376 PLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred CCCCHHHHHHHHHHHHHHHHhc
Confidence 6778889999999999987654
No 114
>PLN02187 rooty/superroot1
Probab=99.85 E-value=1.8e-18 Score=177.04 Aligned_cols=339 Identities=9% Similarity=0.067 Sum_probs=214.5
Q ss_pred HHHHHHhhcCC-CccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcccc
Q 038818 90 LGEMLSSGFNV-VGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRE 168 (486)
Q Consensus 90 ~~~~l~~~~n~-~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~ 168 (486)
+.+.+...+.. ....|...++...+.+.+.+|+.+.+|++.+ ..++++|+|+++++..++.+..+
T Consensus 88 ~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~-----~~~I~it~G~~~al~~~~~~l~~--------- 153 (462)
T PLN02187 88 AEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLT-----PEDIFLTAGCNQGIEIVFESLAR--------- 153 (462)
T ss_pred HHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCC-----cccEEEeCCHHHHHHHHHHHhcC---------
Confidence 44444444332 2234555556678888888999887765332 13789999999998777766543
Q ss_pred CCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC
Q 038818 169 NISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP 248 (486)
Q Consensus 169 ~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp 248 (486)
+++.|+++..+++.+...++..|+ +++.++..+.+++.+|+++|++++++. +.+++++.++||||.+-+
T Consensus 154 --pGd~Vlv~~P~y~~y~~~~~~~g~---~~~~~~l~~~~~~~~d~~~l~~~~~~~------~~~v~i~nP~NPTG~v~s 222 (462)
T PLN02187 154 --PNANILLPRPGFPHYDARAAYSGL---EVRKFDLLPEKEWEIDLEGIEAIADEN------TVAMVVINPNNPCGNVYS 222 (462)
T ss_pred --CCCEEEEeCCCCccHHHHHHHcCC---EEEEEeCccccCCccCHHHHHHhcCCC------cEEEEEeCCCCCCCCccC
Confidence 677888899999988888999999 999999865446899999999887643 246888889999999865
Q ss_pred ---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCC-CCCce-eeccccccCCC-CcceEEEeeCchHH-H--H
Q 038818 249 ---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIE-GADSF-SLNAHKWFFTT-LDCCCLWVKNPNAL-I--K 319 (486)
Q Consensus 249 ---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~-~aDsi-~~~~hK~l~~p-~~~g~~~~~~~~~~-~--~ 319 (486)
+++|+++|++||+++++|++|+......+.+... ..+. ....+ ..++.|.++.| .-+|+++..++... . +
T Consensus 223 ~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~-~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~ 301 (462)
T PLN02187 223 HDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSM-GKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTK 301 (462)
T ss_pred HHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeH-HHhccCCcEEEEecchhhcCCccceeEEEEecCchhHHHHHH
Confidence 8889999999999999999997644321111111 1111 11234 45689996654 56898887544211 0 1
Q ss_pred HhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe
Q 038818 320 ALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF---GVANLRNFLRSHVRMAQLFQELVGGDNRFEIV 396 (486)
Q Consensus 320 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 396 (486)
.+.....+. .+.. ....+..++....+ ..+.+++..+...+.++++.+.|++++++...
T Consensus 302 ~~~~~~~~~----------------~~~~--~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~ 363 (462)
T PLN02187 302 VLQSIKQNL----------------DVTP--DPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCP 363 (462)
T ss_pred HHHHHHHhc----------------cccC--CCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCC
Confidence 111100000 0000 01223333333333 34567778888888999999999988655433
Q ss_pred cCCCeeEEEE-EeecCCCCCCCCCCccchHHHHHHH-HHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHH
Q 038818 397 APRNFAVVCF-RVLPSASGLGDGKANEGANELNRKL-LESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKV 474 (486)
Q Consensus 397 ~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~l-~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~ 474 (486)
..|....+.| ++...... ... + ...+ .+.+.+.|+++..+..+...+++|++++. .++.+++.++.
T Consensus 364 ~~P~gg~fl~~~l~~~~~~------~~~-~--~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~---~~e~l~~al~r 431 (462)
T PLN02187 364 KKPESCTYLLTKLELSLMD------NIK-D--DIDFCVKLAREENLVFLPGDALGLKNWMRITIGV---EAHMLEDALER 431 (462)
T ss_pred CCCCEeEEEEeecChhhCC------CCC-C--HHHHHHHHHhhCCEEEECccccCCCCeEEEEeCC---CHHHHHHHHHH
Confidence 3455544444 34311000 000 0 1233 33445678765555555456899999953 47789999999
Q ss_pred HHHHHHHHhh
Q 038818 475 VQEKLDGILA 484 (486)
Q Consensus 475 l~~~~~~l~~ 484 (486)
|.+++++..+
T Consensus 432 L~~~l~~~~~ 441 (462)
T PLN02187 432 LKGFCTRHAK 441 (462)
T ss_pred HHHHHHHhhh
Confidence 9998876543
No 115
>PRK15029 arginine decarboxylase; Provisional
Probab=99.85 E-value=6.2e-19 Score=185.46 Aligned_cols=234 Identities=14% Similarity=0.132 Sum_probs=163.7
Q ss_pred HHHHHHhhhcCCCcCCCCCCcceecCCCCCH-HHHHHHHH-----HhhcC--CCccccccChhhHHHHHHHHHHHHHHcC
Q 038818 56 ILQDVQQHIVPGITHWQSPYYFAYFPSSGSI-AGFLGEML-----SSGFN--VVGFNWMSSPAATELENIVMDWLGEMLK 127 (486)
Q Consensus 56 il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~l-----~~~~n--~~~~~~~~~~~~~~le~~~~~~l~~l~g 127 (486)
+++.|++....+...|+.|.+-+-..-..++ .....+++ ..=+. -.....-..|.....|.+ +..+++||
T Consensus 142 l~~aL~~y~~~~~~~fH~PGHk~G~~~~~~~~~~~~~~f~G~~~~~~Dlt~ev~glD~L~~p~G~I~eAq--~~aA~~fg 219 (755)
T PRK15029 142 LFSALMKYSDIHEYSWAAPGHQGGVGFTKTPAGRFYHDYYGENLFRTDMGIERTSLGSLLDHTGAFGESE--KYAARVFG 219 (755)
T ss_pred HHHHHHHHHcCCCceeeCCCCCCCCCCCCCchhHHHHHHhccchhhccccccccCCCCCCCCCcHHHHHH--HHHHHHhC
Confidence 5566666666677778888665422100011 11122221 11011 111122233444444444 88999999
Q ss_pred CCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCC
Q 038818 128 LPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKS 207 (486)
Q Consensus 128 ~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~ 207 (486)
.+.+| ++++|+|.+|..++.++.. +++.|+++..+|-|+..++.+.|+ ..++++..-.
T Consensus 220 A~~t~--------FlvNGST~gn~a~i~a~~~-----------~gd~Vlv~RN~HKSv~~al~L~ga---~Pvyl~P~~~ 277 (755)
T PRK15029 220 ADRSW--------SVVVGTSGSNRTIMQACMT-----------DNDVVVVDRNCHKSIEQGLILTGA---KPVYMVPSRN 277 (755)
T ss_pred CCcEE--------EEeCChhHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHcCC---eEEEeccccc
Confidence 98865 8899999999876666654 788899999999999999999999 9998865422
Q ss_pred CC---cccC-----HHHHHHHHHHHH--H--CCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhcc
Q 038818 208 SS---FTLT-----PESLQAAIDLDI--Q--AGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACI 275 (486)
Q Consensus 208 ~~---~~~d-----~~~L~~~l~~~~--~--~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~ 275 (486)
+. +.++ ++.++++|++.. + .+.+|.+|++|.+|. .|.+-++++|+++|+++|++||||+|||+.+.+
T Consensus 278 ~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F 356 (755)
T PRK15029 278 RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARF 356 (755)
T ss_pred ccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCHHHHHHHHHhcCCeEEEECcccccccc
Confidence 11 2344 999999997643 1 345677888888755 799999999999999999999999999998888
Q ss_pred Cccchh--hhc----CCCCCC-ceeeccccccCCCCcceEEEeeCc
Q 038818 276 CPEFRH--FID----GIEGAD-SFSLNAHKWFFTTLDCCCLWVKNP 314 (486)
Q Consensus 276 ~~~~~~--~~~----~~~~aD-si~~~~hK~l~~p~~~g~~~~~~~ 314 (486)
.+.++. .+. .-.++| .++-|.||++.+-.+++++.+++.
T Consensus 357 ~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~ 402 (755)
T PRK15029 357 NPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG 402 (755)
T ss_pred CccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCC
Confidence 876653 221 113788 889999999999999999999764
No 116
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.85 E-value=3.5e-18 Score=173.03 Aligned_cols=347 Identities=8% Similarity=0.024 Sum_probs=216.5
Q ss_pred HHHHHHHHHHhhcCCC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHH
Q 038818 86 IAGFLGEMLSSGFNVV-GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNE 164 (486)
Q Consensus 86 ~~~~~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~ 164 (486)
+|..+.+.+...++.. ...|....+..++.+.+.+|+.+.+|++.+ ..+.++|+|+++++..++.+..+
T Consensus 50 ~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-----~~~I~it~G~~~al~~~~~~l~~----- 119 (409)
T PLN00143 50 TTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLS-----PDDVYLTLGCKHAAEIIIKVLAR----- 119 (409)
T ss_pred CCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCC-----HhhEEEecChHHHHHHHHHHHcC-----
Confidence 3444555555555432 234655556778888999999888776432 13789999999988777666543
Q ss_pred ccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 165 IGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 165 ~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
+++.|+++..++..+...++..|+ +++.+++++.+++.+|+++|++++++. +..++++.++||||
T Consensus 120 ------~gd~v~v~~P~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~~~~~nP~NPTG 184 (409)
T PLN00143 120 ------PEANILLPRPGFPDVETYAIFHHL---EIRHFDLLPEKGWEVDLDAVEAIADEN------TIAMVIINPGNPCG 184 (409)
T ss_pred ------CCCEEEEcCCCCcCHHHHHHHcCC---EEEEEeccCCCCCcCCHHHHHHhcccC------CEEEEEECCCCCCC
Confidence 667888898999999999999999 999999864345789999999887543 23677778999999
Q ss_pred ccCC---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCC-C-ceeeccccccC-CCCcceEEEeeCchHHH
Q 038818 245 TVDP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGA-D-SFSLNAHKWFF-TTLDCCCLWVKNPNALI 318 (486)
Q Consensus 245 ~idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~a-D-si~~~~hK~l~-~p~~~g~~~~~~~~~~~ 318 (486)
.+-+ +++|+++|++|++++++|.+|.....-...... +..+... . .+..++.|.++ ....+|+++..++..+.
T Consensus 185 ~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~-~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~ 263 (409)
T PLN00143 185 SVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVP-MGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLL 263 (409)
T ss_pred CccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcc-hhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhh
Confidence 9966 778888999999999999999764431111111 1111111 1 35567899955 44579998885432111
Q ss_pred HHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Q 038818 319 KALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF---GVANLRNFLRSHVRMAQLFQELVGGDNRFEI 395 (486)
Q Consensus 319 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 395 (486)
+...... .+.... . ...++ ..+...++...+ +.+.+++..++..+..+++.+.|+++++...
T Consensus 264 ~~~~~~~-~~~~~~-------~----~~~~~---~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~ 328 (409)
T PLN00143 264 QICEIAD-SIKKAL-------N----PAPFP---PTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMC 328 (409)
T ss_pred hhHHHHH-HHHHHH-------h----ccCCC---CchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 1000000 000000 0 00000 112222333333 2356778888888888889999988754433
Q ss_pred ecCCCeeEE-EEEeecCCCCCCCCCCccchHHHHHHHH-HHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHH
Q 038818 396 VAPRNFAVV-CFRVLPSASGLGDGKANEGANELNRKLL-ESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWK 473 (486)
Q Consensus 396 ~~~~~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~ 473 (486)
..+|+.+.+ .+++..... ... ....++. +.+.+.|+.+..+..+...+++|++++ ++++++++.++
T Consensus 329 ~~~p~gg~f~w~~l~~~~~--------~~~-~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~---~~~~~l~~al~ 396 (409)
T PLN00143 329 PQKAEGAFFALVKLNLLLL--------EDI-EDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFA---VEQSSLEDGLG 396 (409)
T ss_pred CCCCCeeEEEEEecchhhc--------CCC-CCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEc---CCHHHHHHHHH
Confidence 344554444 444432100 000 0022333 344567876665555555679999995 24779999999
Q ss_pred HHHHHHHHHhhc
Q 038818 474 VVQEKLDGILAT 485 (486)
Q Consensus 474 ~l~~~~~~l~~~ 485 (486)
.|.+++++..++
T Consensus 397 rl~~~l~~~~~~ 408 (409)
T PLN00143 397 RLKSFCGRHAKK 408 (409)
T ss_pred HHHHHHHHhccC
Confidence 999998877665
No 117
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.85 E-value=4.9e-19 Score=175.71 Aligned_cols=284 Identities=14% Similarity=0.074 Sum_probs=189.8
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDP 196 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~ 196 (486)
++++.+++++|.+.+ ..++|+|+++++..++.+... +++.|+++...|..+...++..|+
T Consensus 58 ~lr~~ia~~~~~~~~-------~i~~~~G~~~~l~~~~~~l~~-----------~gd~v~~~~p~y~~~~~~~~~~g~-- 117 (346)
T TIGR01141 58 ELKQALADYYGVDPE-------QILLGNGSDEIIELLIRAFLE-----------PGDAVLVPPPTYSMYEISAKIHGA-- 117 (346)
T ss_pred HHHHHHHHHhCcChH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEcCCCHHHHHHHHHHcCC--
Confidence 456777888887654 689999999887655554422 566788888877777778888999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh--CceEEeeccccchhc
Q 038818 197 KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY--SIWVHVDAAYAGSAC 274 (486)
Q Consensus 197 ~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~--g~~lhvD~a~g~~~~ 274 (486)
+++.+|+++ ++.+|++.|++++.+. +.+|+++.++|++|.+-|++++.++|+.+ |+++++|++|+....
T Consensus 118 -~~~~~~~~~--~~~~d~~~l~~~~~~~------~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~ 188 (346)
T TIGR01141 118 -EVVKVPLDE--DGQLDLEDILVAIDDK------PKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSG 188 (346)
T ss_pred -eEEEeccCC--CCCCCHHHHHHhcCCC------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcC
Confidence 999999975 4689999999876443 34688889999999999999999999987 999999999974321
Q ss_pred cCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCC
Q 038818 275 ICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFR 353 (486)
Q Consensus 275 ~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~ 353 (486)
.+......... ..+.+..+++|+++.| ..+|+++.++ ..+.+ +...... + ...
T Consensus 189 -~~~~~~~~~~~-~~~i~~~S~sK~~g~~G~r~G~~~~~~-~~~~~-~~~~~~~----------------~------~~~ 242 (346)
T TIGR01141 189 -EPSTLPLLAEY-PNLIVLRTLSKAFGLAGLRIGYAIANA-EIIDA-LNKVRAP----------------F------NLS 242 (346)
T ss_pred -CccHHHHHhhC-CCEEEEehhhHhhhchhhhceeeecCH-HHHHH-HHhccCC----------------C------CCC
Confidence 11111112111 1235567789999644 4588888743 33332 2111000 0 011
Q ss_pred chHHHHHHHHhch-HHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHH
Q 038818 354 ALKLWLVLRSFGV-ANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLL 432 (486)
Q Consensus 354 ~l~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~ 432 (486)
.+....+...+.. ..+.+..++..++++++.+.|++++++++. ++....+.+.+.. . .+++.
T Consensus 243 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~~~~~-~---------------~~~~~ 305 (346)
T TIGR01141 243 RLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLEVY-PSDANFVLIRFPR-D---------------ADALF 305 (346)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEC-CCcCCEEEEecCC-C---------------HHHHH
Confidence 2223333333322 246777888889999999999988888854 4455666665542 1 24567
Q ss_pred HHHHhcCcEEEeeeeECC-EeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 433 ESINASGQLYVSHGMVAG-IYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 433 ~~l~~~g~~~~~~~~~~~-~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
++|.++|+.+.....+.+ .+++|+++. +++|+++++++|+
T Consensus 306 ~~L~~~gI~v~~g~~f~~~~~~iRls~~----~~~~i~~~~~~l~ 346 (346)
T TIGR01141 306 EALLEKGIIVRDLNSYPGLPNCLRITVG----TREENDRFLAALR 346 (346)
T ss_pred HHHHHCCeEEEeCCCcCCCCCeEEEecC----CHHHHHHHHHHhC
Confidence 777788875443332212 578999973 5779999998874
No 118
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.85 E-value=1.6e-18 Score=184.94 Aligned_cols=364 Identities=13% Similarity=0.089 Sum_probs=232.2
Q ss_pred hhHHhhcCCCCCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHH-------HHHHhhcCCCcccccc
Q 038818 35 PGYLRKRLPESAPYNPEPIETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLG-------EMLSSGFNVVGFNWMS 107 (486)
Q Consensus 35 p~~~~~~~~~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-------~~l~~~~n~~~~~~~~ 107 (486)
|+.++..-+..||+ +.++.|+++++.++..+|.. ...|.|.-.-+.-.|+++. +|++++ .+++...++
T Consensus 31 P~~i~~~~~l~lp~-~~sE~e~~~~~~~la~~N~~---~~~fig~G~y~~~~p~~i~r~v~~~p~~~Tay-tPyQ~EisQ 105 (939)
T TIGR00461 31 PPNILKRRPLQLEA-PSKEYEALAHLKKIASKNHK---FKSYIGMGYYGTILPPVIQRNLLENPGWYTAY-TPYQPEISQ 105 (939)
T ss_pred CHHHhcCCCCCCCC-CCCHHHHHHHHHHHHhcCCC---ccccCCCCcCCCcCChHHHHHHHhCchhhhcC-CCCChhhhh
Confidence 56666555677885 57999999999987666643 2345552111223334443 445543 444444445
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH
Q 038818 108 SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK 187 (486)
Q Consensus 108 ~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 187 (486)
+.....+|.+ .++++|.|++.. +..+..++|.+.- |+.++.... + .++..|++++..|+....
T Consensus 106 G~Le~l~e~Q--t~i~eLtGm~~a-------NaSl~d~atA~aE-a~~~a~~~~-~------~~~~~vlv~~~~hP~~~~ 168 (939)
T TIGR00461 106 GRLEALLNFQ--TVVSDLTGLPVA-------NASLLDEGTAAAE-AMALSFNVS-K------KKANKFFVAKDLHPQTKS 168 (939)
T ss_pred HHHHHHHHHH--HHHHHHHCCChh-------hhhccchhhHHHH-HHHHHHHhh-c------CCCCEEEECCCCCcchHH
Confidence 5555566655 999999999976 6788888886553 444333211 0 034678899999987543
Q ss_pred ----HHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceE
Q 038818 188 ----AAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWV 263 (486)
Q Consensus 188 ----a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~l 263 (486)
-+...|+ +++.++ +++|++.+ + .+.|+++. .+..|.+.|+++|++++|+.|.++
T Consensus 169 v~~t~a~~~g~---~v~~~~----------~~~l~~~~--~------~~~v~~q~-Pn~~G~ied~~~i~~~~h~~gal~ 226 (939)
T TIGR00461 169 VLHTRAKPFGI---EVIVVD----------CSDIKKAV--D------VFGCLLQY-PATDGSILDYKQLIDALHSHKSLV 226 (939)
T ss_pred HHHHHHHhcCc---EEEEEc----------HHHHhhcC--C------EEEEEEEC-CCCCeEEecHHHHHHHHHHcCCEE
Confidence 3457788 887763 34465554 1 23444444 456899999999999999999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCCceeeccccccC-----CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCc
Q 038818 264 HVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFF-----TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQV 338 (486)
Q Consensus 264 hvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-----~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~ 338 (486)
++++-..+..++.+. .. -++|.++.+.++|+. +|. .|++.++++ +. ...|+.+.+...+..+.
T Consensus 227 ~~~ad~~al~ll~~P-ge-----~GaDi~vg~~q~fg~p~g~GGP~-aG~~a~~~~--l~---r~lPgrivG~s~D~~G~ 294 (939)
T TIGR00461 227 SVAADLMALTLLTPP-GH-----YGADIVLGSSQRFGVPMGYGGPH-AAFFAVKDE--YN---RKMPGRIVGVSKDALGN 294 (939)
T ss_pred EEEechHHhCCcCCH-HH-----cCCcEEeeCCCccCCCCCCCCCc-eeeeeecHh--hH---hhCCCCceeEEecCCCC
Confidence 996644443333322 11 189999666666654 443 888888875 22 23344444321111111
Q ss_pred cCCCCcccc----CCCCCCc------------hHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCee
Q 038818 339 VDYKDWQIT----LSRRFRA------------LKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFA 402 (486)
Q Consensus 339 ~~~~~~~~~----~sr~~~~------------l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~ 402 (486)
..+. ++++ .-||..+ +.+++++..+|.+|++++.++...++.+|++.|.+ .|++++.++.+.
T Consensus 295 ~~~~-l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~-~G~~~~~~~fF~ 372 (939)
T TIGR00461 295 TALR-LALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEN-DPHELINKTWFD 372 (939)
T ss_pred ccce-eecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh-CCCcccCCCccc
Confidence 1111 1111 1233221 22344477789999999999999999999999998 599998887788
Q ss_pred EEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 403 VVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 403 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
.+.+++.... .+++.+++.++|+. +.. ...+.+++|+. ..+|++||+.+++.+.
T Consensus 373 ~~~v~~~~~~---------------~~~i~~~~~~~gi~-l~~---~~~~~i~~s~~-E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 373 TLTVKVGNGI---------------SSELLKAAEEFNIN-LRA---VDTTTVGIALD-ETTTKADVENLLKVFD 426 (939)
T ss_pred eEEEEeCCCC---------------HHHHHHHHHHCCCe-eee---cCCCEEEEEee-cCCCHHHHHHHHHHhc
Confidence 8888873111 34677778788875 332 22347999995 6888889999999994
No 119
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.85 E-value=1.8e-18 Score=174.81 Aligned_cols=317 Identities=10% Similarity=0.009 Sum_probs=208.8
Q ss_pred hhhHHHHHHHHHHHHHHcCCC-CCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH
Q 038818 109 PAATELENIVMDWLGEMLKLP-KSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK 187 (486)
Q Consensus 109 ~~~~~le~~~~~~l~~l~g~~-~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 187 (486)
++...+.+.+.+|+.+.+|.+ .+. ..++++|+|+++++..++.+..+ +++.|+++..++.....
T Consensus 81 ~G~~~lr~aia~~~~~~~g~~~~~~----~~~I~it~Gs~~al~~~~~~~~~-----------~gd~Vlv~~P~y~~~~~ 145 (410)
T PRK06290 81 NGIQEFKEAAARYMEKVFGVKDIDP----VTEVIHSIGSKPALAMLPSCFIN-----------PGDVTLMTVPGYPVTGT 145 (410)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcCCC----cceEEEccCHHHHHHHHHHHhCC-----------CCCEEEEeCCCCccHHH
Confidence 556788899999998888865 221 01588999988887666555433 66778888889988888
Q ss_pred HHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHHHhCceEE
Q 038818 188 AAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAKRYSIWVH 264 (486)
Q Consensus 188 a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~~~g~~lh 264 (486)
.++..|. +++.+|.++++++.+|+++|++++.+. +.+|+++.++||||.+-+ +++|.++|++||+|++
T Consensus 146 ~~~~~g~---~v~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI 216 (410)
T PRK06290 146 HTKYYGG---EVYNLPLLEENNFLPDLDSIPKDIKEK------AKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVV 216 (410)
T ss_pred HHHHcCC---EEEEEecCCCcCCcCCHHHHHHhhccc------ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEE
Confidence 9999999 999999987556788999999888643 347888889999999976 6788888999999999
Q ss_pred eeccccchhccCccchhh--hcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCC
Q 038818 265 VDAAYAGSACICPEFRHF--IDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDY 341 (486)
Q Consensus 265 vD~a~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 341 (486)
+|.+|+..... ...... +.+....+.+..++.|.++.| .-+|+++. ++............+..
T Consensus 217 ~DEaY~~~~~~-~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~-~~~l~~~l~~~~~~~~~------------ 282 (410)
T PRK06290 217 QDAAYAALTFD-GKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVG-NELIVKAFATVKDNNDS------------ 282 (410)
T ss_pred EecchhhceeC-CCCcChhcCCCccccEEEEeechhhcCCchhheEeEEe-CHHHHHHHHHHHhcccc------------
Confidence 99999764321 111111 111123456777889999644 45777765 33333221111100000
Q ss_pred CCccccCCCCCCchHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEE-EeecCCCCCCCCC
Q 038818 342 KDWQITLSRRFRALKLWLVLRSFG-VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCF-RVLPSASGLGDGK 419 (486)
Q Consensus 342 ~~~~~~~sr~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f-~~~~~~~~~~~~~ 419 (486)
....+...++...+- .+.+++..++..+.++++.+.|++. ++.+. +|+.+.+.| ++.+...+
T Consensus 283 ---------~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~p~g~f~l~v~lp~~~~~----- 346 (410)
T PRK06290 283 ---------GQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEV-GFKAE-MPGGTFYLYVKAPKGTKS----- 346 (410)
T ss_pred ---------CCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhC-CCeec-CCCeeeEEEEECCCcccc-----
Confidence 001122222333331 2345667777788889999999887 77765 455666555 44321100
Q ss_pred CccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 420 ANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 420 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
........++.+.|.++|.+++.+..-. .+++|++++.+..++++.++++++|.+.+.++
T Consensus 347 --~~~~~~~~~~~~~Ll~~~~v~~~p~~~~-~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 347 --GIKFENAEEFSQYLIKEKLISTVPWDDA-GHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred --CCCCCCHHHHHHHHHHhCCEEEECCccc-cCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 0000113467778877777554443211 35899999888889999999999999988765
No 120
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.85 E-value=3.5e-18 Score=172.95 Aligned_cols=341 Identities=11% Similarity=0.066 Sum_probs=208.0
Q ss_pred HHHHHHHHhhcCCC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcc
Q 038818 88 GFLGEMLSSGFNVV-GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIG 166 (486)
Q Consensus 88 ~~~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 166 (486)
..+.+.+...+... ...|........+++.+.+++....|.+.. ....++|+|+|+|+..++.+...
T Consensus 51 ~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-----~~~ii~t~G~t~al~~~~~~l~~------- 118 (403)
T TIGR01265 51 PEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLT-----ADDVVLTSGCSQAIEICIEALAN------- 118 (403)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCC-----HHHEEEecChHHHHHHHHHHhCC-------
Confidence 34445554444322 224444444556666666666654444321 12689999999998877776543
Q ss_pred ccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 167 RENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 167 ~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
+++.|+++..++..+...++..|+ +++.+++++++++.+|++++++++.+.+ .+|++++++|++|.+
T Consensus 119 ----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~i~~p~NPtG~~ 185 (403)
T TIGR01265 119 ----PGANILVPRPGFPLYDTRAAFSGL---EVRLYDLLPEKDWEIDLDGLEALADEKT------VAIVVINPSNPCGSV 185 (403)
T ss_pred ----CCCEEEEeCCCchhHHHHHHHcCC---EEEEecCCcccCCccCHHHHHHHhCcCc------cEEEEecCCCCCCCC
Confidence 566788888999888889999999 9999988654467899999999886543 368888999999998
Q ss_pred C---CchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCC-CCC-ceeeccccccCCC-CcceEEEeeCc-hHHHH
Q 038818 247 D---PLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIE-GAD-SFSLNAHKWFFTT-LDCCCLWVKNP-NALIK 319 (486)
Q Consensus 247 d---pl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~-~aD-si~~~~hK~l~~p-~~~g~~~~~~~-~~~~~ 319 (486)
- ++++|.++|+++|+++++|++|+.+..-.+.+.. +..+. ... .++.++.|.++.| ..+|+++..++ ..+..
T Consensus 186 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~ 264 (403)
T TIGR01265 186 FSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIP-MASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRD 264 (403)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccc-hhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHH
Confidence 5 4899999999999999999999765432111111 11111 112 3456789986644 56898887543 21111
Q ss_pred -HhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC
Q 038818 320 -ALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP 398 (486)
Q Consensus 320 -~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 398 (486)
.......+. .. .. +...+....+-..+.......+++..++..+.++++.+.|+.++++++..+
T Consensus 265 ~~~~~~~~~~-~~-------------~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p 329 (403)
T TIGR01265 265 TVLQGLKNLL-QR-------------IL-GPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKP 329 (403)
T ss_pred HHHHHHHHHh-hh-------------hc-CCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC
Confidence 000000000 00 00 000011111122222222345667777888888899999998878875544
Q ss_pred CCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHH-HhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 038818 399 RNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESI-NASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQE 477 (486)
Q Consensus 399 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~ 477 (486)
.....+.+++...... .. .....+.+.+ .+.|+.+..+..+...+++|+++.. .++.+++.++.|.+
T Consensus 330 ~~g~f~~~~~~~~~~~------~~---~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~---~~~~l~~~l~~l~~ 397 (403)
T TIGR01265 330 EGAMYLMVKLELELFP------EI---KDDVDFCEKLVREESVICLPGSAFGLPNWVRITITV---PESMLEEACSRIKE 397 (403)
T ss_pred CceeEEEEeccccccC------CC---CCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecC---CHHHHHHHHHHHHH
Confidence 4444555555421100 00 0123455554 4567765555444446799999963 46688999988888
Q ss_pred HHHH
Q 038818 478 KLDG 481 (486)
Q Consensus 478 ~~~~ 481 (486)
++++
T Consensus 398 ~~~~ 401 (403)
T TIGR01265 398 FCER 401 (403)
T ss_pred HHHh
Confidence 7754
No 121
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.84 E-value=3.3e-18 Score=172.40 Aligned_cols=306 Identities=10% Similarity=0.031 Sum_probs=194.7
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH
Q 038818 105 WMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA 184 (486)
Q Consensus 105 ~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s 184 (486)
|....+...+..++.+++++++|.+. . ++.++|+++++.++.+... ++++|+++...|.+
T Consensus 70 ~~~~~g~~~l~~~l~~~l~~~~g~~~--------~-i~~~sG~~a~~~a~~~~~~-----------~gd~vi~~~~~~~~ 129 (385)
T TIGR01825 70 VRTIAGTLRLHEELEEKLAKFKKTEA--------A-LVFQSGFNTNQGVLSALLR-----------KGDIVLSDELNHAS 129 (385)
T ss_pred cCcccCCcHHHHHHHHHHHHHhCCCc--------E-EEECcHHHHHHHHHHHhCC-----------CCCEEEEEccccHH
Confidence 33333456777888999999998643 3 4445558888877665533 56678888899999
Q ss_pred HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEE
Q 038818 185 LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVH 264 (486)
Q Consensus 185 ~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lh 264 (486)
...++...|. ++..++ .+|++++++.+.+... ..+.+|+.....+++|.+.|+++|.++|++||++++
T Consensus 130 ~~~~~~~~g~---~~~~~~-------~~d~~~l~~~l~~~~~--~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li 197 (385)
T TIGR01825 130 IIDGLRLTKA---TKKIYK-------HADMDDLDRVLRENPS--YGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTY 197 (385)
T ss_pred HHHHHHhcCC---ceEEeC-------CCCHHHHHHHHHhhcc--CCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEE
Confidence 9888888887 666553 5789999998875431 124567777778999999999999999999999999
Q ss_pred eeccccchhccCccc-hhhhcCC-CCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCC
Q 038818 265 VDAAYAGSACICPEF-RHFIDGI-EGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYK 342 (486)
Q Consensus 265 vD~a~g~~~~~~~~~-~~~~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 342 (486)
+|++|+.+....... .....++ ...|.+..+++|+++.+ .|+++. +++..........+|..
T Consensus 198 ~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~--gG~~~~-~~~~~~~~~~~~~~~~~------------- 261 (385)
T TIGR01825 198 VDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVV--GGYAAG-HKELIEYLKNRARPFLF------------- 261 (385)
T ss_pred EECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcC--CCEEec-CHHHHHHHHHhCccccc-------------
Confidence 999996543321100 0000011 35678889999999754 255544 33333321111111211
Q ss_pred CccccCCCC-CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCc
Q 038818 343 DWQITLSRR-FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKAN 421 (486)
Q Consensus 343 ~~~~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~ 421 (486)
.++.. ....++..++..+.. ..+..++..++++++.+.|+++ ++++. .+..+++.+.+.+
T Consensus 262 ----~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~----------- 322 (385)
T TIGR01825 262 ----STAQPPAVVAALAAAVDELQR--SPELMERLWDNTRFFKAGLGKL-GYDTG-GSETPITPVVIGD----------- 322 (385)
T ss_pred ----cCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEECC-----------
Confidence 00000 111222333333211 1345677778899999999886 77765 3444555555432
Q ss_pred cchHHHHHHHHHHHHhcCcEEEeeeeE----CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 422 EGANELNRKLLESINASGQLYVSHGMV----AGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 422 ~~~~~~~~~l~~~l~~~g~~~~~~~~~----~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
......+.+.|.++|+. +.+..+ .+..++|+++ +..++++||+++++.|+++++++
T Consensus 323 ---~~~~~~~~~~L~~~gi~-v~~~~~~~~~~~~~~iRi~~-~~~~~~e~i~~~~~~l~~~~~~~ 382 (385)
T TIGR01825 323 ---EKAAQEFSRRLFDEGIF-AQSIVFPTVPRGTARIRNIP-TAEHTKDDLDQALDAYEKVGKEL 382 (385)
T ss_pred ---HHHHHHHHHHHHHCCcE-EcccCCCCCCCCCceEEEEE-cCCCCHHHHHHHHHHHHHHHHHh
Confidence 11234677777777874 332211 2446899987 45678889999999999988654
No 122
>PRK08912 hypothetical protein; Provisional
Probab=99.84 E-value=1.6e-18 Score=174.53 Aligned_cols=315 Identities=13% Similarity=0.043 Sum_probs=203.0
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCc
Q 038818 103 FNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTH 182 (486)
Q Consensus 103 ~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 182 (486)
..|....+..++.+.+.+++.+.+|.+.+. ...+++|+|+++++..++..... +++.|+++..+|
T Consensus 57 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~----~~~i~~t~G~~~al~~~~~~~~~-----------~gd~Vlv~~p~y 121 (387)
T PRK08912 57 NQYPPMMGLPELRQAVAAHYARFQGLDLDP----ETEVMVTSGATEALAAALLALVE-----------PGDEVVLFQPLY 121 (387)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----cccEEEeCCcHHHHHHHHHHhcC-----------CCCEEEEeCCCc
Confidence 445555556789999999999888864331 01688999999988666554432 567788899999
Q ss_pred hHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHHHh
Q 038818 183 SALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAKRY 259 (486)
Q Consensus 183 ~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~~~ 259 (486)
..+...++..|+ +++.+|+++ +++.+|+++|++.+.+. +.+|+++.++|+||.+-+ +++|.++|++|
T Consensus 122 ~~~~~~~~~~g~---~~~~~~~~~-~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~ 191 (387)
T PRK08912 122 DAYLPLIRRAGG---VPRLVRLEP-PHWRLPRAALAAAFSPR------TKAVLLNNPLNPAGKVFPREELALLAEFCQRH 191 (387)
T ss_pred hhhHHHHHHcCC---EEEEEecCc-ccCcCCHHHHHHHhCcc------ceEEEEeCCCCCcCcccCHHHHHHHHHHHHHC
Confidence 999999999999 999999874 35789999999988643 336777899999999865 77799999999
Q ss_pred CceEEeeccccchhccCccchhh--hcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCCCC
Q 038818 260 SIWVHVDAAYAGSACICPEFRHF--IDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASDSK 336 (486)
Q Consensus 260 g~~lhvD~a~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 336 (486)
++++++|.+|+.+.......... +.+...-+.+..+++|.++.| ..+|+++...+ ...........+..
T Consensus 192 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~-~~~~l~~~~~~~~~------- 263 (387)
T PRK08912 192 DAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPP-LLRVLAKAHQFLTF------- 263 (387)
T ss_pred CeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCHH-HHHHHHHHHhhccc-------
Confidence 99999999997543211111111 112223457788899998844 45888877543 32221111100000
Q ss_pred CccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeE-EEEEeecCCC
Q 038818 337 QVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAV-VCFRVLPSAS 413 (486)
Q Consensus 337 ~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~-v~f~~~~~~~ 413 (486)
.. ......+....+ ..+.+++..++..+.++++.+.|++. ++++. ++..+. +++.+.+...
T Consensus 264 ----------~~----~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~l~~~l~~~~~ 327 (387)
T PRK08912 264 ----------TT----PPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRI-GFPVL-PSQGTYFLTVDLAPLGL 327 (387)
T ss_pred ----------cC----ChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCccc-CCCcceEEEecccccCC
Confidence 00 011111111212 23456677788888899999999887 77765 444444 3445443110
Q ss_pred CCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC----CEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 414 GLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA----GIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 414 ~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~----~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
.....++.+.+. +.|+.+.++..+. +.+++|++++. .++++++.++.|.+.++
T Consensus 328 -----------~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~---~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 328 -----------AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK---RDATLDEAVERLAAARR 385 (387)
T ss_pred -----------CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC---CHHHHHHHHHHHHHHHh
Confidence 001234566654 4677554443332 25799999964 36788888888887654
No 123
>PRK08960 hypothetical protein; Provisional
Probab=99.84 E-value=1.2e-18 Score=175.54 Aligned_cols=326 Identities=12% Similarity=0.050 Sum_probs=205.4
Q ss_pred HHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcc
Q 038818 87 AGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIG 166 (486)
Q Consensus 87 ~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 166 (486)
+..+.+.+...+......|...++..++.+.+.+++.+.+|.+.+ ....++|+|+++++..++.+...
T Consensus 47 ~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-----~~~i~it~G~~~al~~~~~~~~~------- 114 (387)
T PRK08960 47 AEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVD-----PERILVTPGGSGALLLASSLLVD------- 114 (387)
T ss_pred CHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCC-----hhhEEEccCcHHHHHHHHHHhcC-------
Confidence 444555555555433345666666788988999999888776432 13789999999998776655432
Q ss_pred ccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 167 RENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 167 ~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
+++.|+++..+|.+....+...|. +++.+|+++++++.+|++.|++++++.+ .+++++.++|+||.+
T Consensus 115 ----~gd~vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------~~i~i~~p~NPtG~~ 181 (387)
T PRK08960 115 ----PGKHWLLADPGYPCNRHFLRLVEG---AAQLVPVGPDSRYQLTPALVERHWNADT------VGALVASPANPTGTL 181 (387)
T ss_pred ----CCCEEEEcCCCCcchHHHHHhcCC---eEEEEecCcccCCCCCHHHHHHHhCccc------eEEEEECCCCCCCcC
Confidence 677888999999999999999999 9999999865567899999999887543 367788899999998
Q ss_pred CC---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCC-ceeeccccccC-CCCcceEEEeeCchHHHHHh
Q 038818 247 DP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGAD-SFSLNAHKWFF-TTLDCCCLWVKNPNALIKAL 321 (486)
Q Consensus 247 dp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aD-si~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~ 321 (486)
-+ +++|+++|++||+++++|++|..... .+.....+ .+. .+ .+..+++|.++ ...-+|+++..++ .+....
T Consensus 182 ~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~-~~~~~~~~-~~~-~~vi~~~S~SK~~g~~GlRiG~~~~~~~-~~~~~~ 257 (387)
T PRK08960 182 LSRDELAALSQALRARGGHLVVDEIYHGLTY-GVDAASVL-EVD-DDAFVLNSFSKYFGMTGWRLGWLVAPPA-AVPELE 257 (387)
T ss_pred cCHHHHHHHHHHHHHcCCEEEEEcccccccc-CCCCCChh-hcc-CCEEEEeecccccCCcccEEEEEEcCHH-HHHHHH
Confidence 66 56777789999999999999976432 21111111 121 23 45567899986 4345888887543 322111
Q ss_pred cCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC
Q 038818 322 STNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF---GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP 398 (486)
Q Consensus 322 ~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 398 (486)
.....+. . ....+...++...+ ..+.+.+..+...+..+.+.+.|+++ ++.+...
T Consensus 258 ~~~~~~~-----------------~----~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~ 315 (387)
T PRK08960 258 KLAQNLY-----------------I----SASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALREL-GFGIAVE 315 (387)
T ss_pred HHHhhhc-----------------c----CCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCcCCcC
Confidence 1100000 0 01122222222222 12455666667777888899999886 6655334
Q ss_pred CCeeEEEE-EeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC---CEeEEEEEecCCCCcHHHHHHHHH
Q 038818 399 RNFAVVCF-RVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA---GIYFIRFAVGATLTEDRHVIAAWK 473 (486)
Q Consensus 399 ~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~---~~~~lR~~~~~~~tt~~did~~i~ 473 (486)
|..+.+.| ++..... + ..++.+.+. ++|+.+.++..+. +..++|+++.. +.+.+.+.++
T Consensus 316 p~g~~f~~~~~~~~~~-----------~--~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~---~~~~l~~al~ 379 (387)
T PRK08960 316 PQGAFYLYADISAFGG-----------D--AFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ---SLPRLQEAVE 379 (387)
T ss_pred CCeeEEEEEeccccCC-----------C--HHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC---CHHHHHHHHH
Confidence 44444433 3322100 1 235565654 4677544443332 23689999963 4557777776
Q ss_pred HHHHHH
Q 038818 474 VVQEKL 479 (486)
Q Consensus 474 ~l~~~~ 479 (486)
.|.+++
T Consensus 380 ~l~~~~ 385 (387)
T PRK08960 380 RIARGL 385 (387)
T ss_pred HHHHHH
Confidence 666544
No 124
>PRK07777 aminotransferase; Validated
Probab=99.84 E-value=1.4e-18 Score=174.98 Aligned_cols=325 Identities=14% Similarity=0.060 Sum_probs=208.1
Q ss_pred HHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCC
Q 038818 92 EMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENIS 171 (486)
Q Consensus 92 ~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~ 171 (486)
+.+...+......|...++..++++.+.+++.+.+|.+... ....++|+||++|+..++.+... +
T Consensus 44 ~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~~~i~~t~G~~~al~~~~~~~~~-----------~ 108 (387)
T PRK07777 44 EAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDP----DTEVLVTVGATEAIAAAVLGLVE-----------P 108 (387)
T ss_pred HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCCcHHHHHHHHHHhcC-----------C
Confidence 33444443333456666677889999999999988875321 01588999999998766654422 5
Q ss_pred CeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCC-CCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC---
Q 038818 172 RLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKS-SSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD--- 247 (486)
Q Consensus 172 ~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~-~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id--- 247 (486)
++.|++....|.....+++..|. +++.++.+++ .++.+|+++|++++++. +.+|+++.++|++|.+-
T Consensus 109 gd~vli~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~ 179 (387)
T PRK07777 109 GDEVLLIEPYYDSYAAVIAMAGA---HRVPVPLVPDGRGFALDLDALRAAVTPR------TRALIVNSPHNPTGTVLTAA 179 (387)
T ss_pred CCEEEEeCCCchhhHHHHHHCCC---EEEEeecCCccCCCcCCHHHHHHhcCcc------cEEEEEcCCCCCCCccCCHH
Confidence 66777788889888899999999 9999998764 25789999999988653 34677888999999874
Q ss_pred CchHHHHHHHHhCceEEeeccccchhccCccchhh--hcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCC
Q 038818 248 PLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHF--IDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTN 324 (486)
Q Consensus 248 pl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~ 324 (486)
++++|.++|++|++++++|.+|+............ +.+....+.+..+++|.++.| ..+|+++..++ ... .+...
T Consensus 180 ~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~-l~~-~~~~~ 257 (387)
T PRK07777 180 ELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAP-LIA-AVRAA 257 (387)
T ss_pred HHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHH-HHH-HHHHH
Confidence 58899999999999999999997644311111111 122233567788899999854 44787776543 222 22111
Q ss_pred cccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHH--hchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCee
Q 038818 325 PEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRS--FGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFA 402 (486)
Q Consensus 325 ~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~--~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~ 402 (486)
..+... ........++... .+.+.++++.+...++++++.+.|++. ++++. ++..+
T Consensus 258 ~~~~~~--------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~g~ 315 (387)
T PRK07777 258 KQYLTY--------------------VGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEA-GFEVH-DSAGT 315 (387)
T ss_pred Hhhccc--------------------CCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC-CCCcc-CCCcc
Confidence 111100 0011111111111 234566677788888999999999886 67765 44444
Q ss_pred EEEE-EeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC-----CEeEEEEEecCCCCcHHHHHHHHHHH
Q 038818 403 VVCF-RVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA-----GIYFIRFAVGATLTEDRHVIAAWKVV 475 (486)
Q Consensus 403 ~v~f-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~-----~~~~lR~~~~~~~tt~~did~~i~~l 475 (486)
.+.+ .+.+.. .. ....+.+++. +.|+.+.++..+. +..++|+++.. .++++++.++.|
T Consensus 316 ~~~~~~~~~~~--------~~----~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~---~~~~l~~~l~~l 380 (387)
T PRK07777 316 YFLCADPRPLG--------YD----DGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK---RDDTLDEAIRRL 380 (387)
T ss_pred eEEEecccccC--------CC----CHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC---CHHHHHHHHHHH
Confidence 4433 443211 00 1245666665 4577544433332 24689999953 577999999888
Q ss_pred HHHH
Q 038818 476 QEKL 479 (486)
Q Consensus 476 ~~~~ 479 (486)
.++.
T Consensus 381 ~~~~ 384 (387)
T PRK07777 381 RALR 384 (387)
T ss_pred HHHh
Confidence 7754
No 125
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.84 E-value=1.4e-18 Score=180.85 Aligned_cols=334 Identities=10% Similarity=0.012 Sum_probs=209.5
Q ss_pred HHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcC--CCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcc
Q 038818 89 FLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLK--LPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIG 166 (486)
Q Consensus 89 ~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g--~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 166 (486)
.+.+.+...+.. ...|....+..++.+.+.+++.+..+ ++++ ++++|+|+++++..++.+..+
T Consensus 166 ~~~~~~~~~~~~-~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~-------~I~it~G~~eal~~~~~~l~~------- 230 (517)
T PRK13355 166 EVVYDMAQQLTD-TEGYSDSKGLFSARKAIMQYAQLKGLPNVDVD-------DIYTGNGVSELINLSMSALLD------- 230 (517)
T ss_pred HHHHHHHHHhhc-CCCCCCCcChHHHHHHHHHHHHhcCCCCCChh-------HEEEeCcHHHHHHHHHHHhCC-------
Confidence 333444333332 23566666677888888888866543 3333 789999999998777765533
Q ss_pred ccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 167 RENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 167 ~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
+++.|+++..++..+...++..|. +++.++++++++|.+|+++|++++.+.+ .+|+++.++||||.+
T Consensus 231 ----~Gd~Vli~~P~y~~y~~~~~~~g~---~~v~~~~~~~~~~~~d~~~l~~~~~~~~------k~i~i~nP~NPTG~v 297 (517)
T PRK13355 231 ----DGDEVLIPSPDYPLWTACVNLAGG---TAVHYRCDEQSEWYPDIDDIRSKITSRT------KAIVIINPNNPTGAL 297 (517)
T ss_pred ----CCCEEEEcCCCCcCHHHHHHHCCC---EEEEeecCcccCCCCCHHHHHHhcCcCc------eEEEEECCCCCCCcC
Confidence 677888999999999999999999 9999999876678999999999886543 378888999999999
Q ss_pred CC---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCcee-eccccccC-CCCcceEEEee-CchHHHHH
Q 038818 247 DP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFS-LNAHKWFF-TTLDCCCLWVK-NPNALIKA 320 (486)
Q Consensus 247 dp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~-~~~hK~l~-~p~~~g~~~~~-~~~~~~~~ 320 (486)
-+ +++|+++|++||+++++|++|.........+..........-.++ .++.|.++ +..-+|++++. ++......
T Consensus 298 ~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~ 377 (517)
T PRK13355 298 YPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDY 377 (517)
T ss_pred cCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHHHH
Confidence 77 889999999999999999999754321111111111111222343 45799875 44568888864 23221111
Q ss_pred hcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhch-HHHHHH---HHHHHHHHHHHHHHHhCCCCeEEe
Q 038818 321 LSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGV-ANLRNF---LRSHVRMAQLFQELVGGDNRFEIV 396 (486)
Q Consensus 321 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~-~g~~~~---~~~~~~~a~~l~~~L~~~~~~~~~ 396 (486)
.... ..+... .. ....+..+++...+.. +.+.+. .++..+.++++.+.|+++|++++.
T Consensus 378 ~~~l-~~~~~~--------------~~---~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~ 439 (517)
T PRK13355 378 IEGL-NMLANM--------------RL---CSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNAIPGISAV 439 (517)
T ss_pred HHHH-HHHhcC--------------cC---CcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCcccC
Confidence 0000 000000 00 0123334444444421 112222 234556678899999988888865
Q ss_pred cCCCeeEEEE-EeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHH
Q 038818 397 APRNFAVVCF-RVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWK 473 (486)
Q Consensus 397 ~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~ 473 (486)
+|..+.+.| ++....... . + ....+.+.|.+.|+++..+..+. +.+++|+++. .+++++++.++
T Consensus 440 -~p~g~fy~~~~l~~~~~~~------~--~-~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~---~~~~~l~~a~~ 506 (517)
T PRK13355 440 -KPKAAFYIFPKIDVKKFNI------H--D-DEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYL---PRLEDLEDAMD 506 (517)
T ss_pred -CCCeeeEEEeecCcccCCC------C--C-HHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeC---CCHHHHHHHHH
Confidence 566777766 443211000 0 0 11233445567787666555443 4679999983 46778999999
Q ss_pred HHHHHHHH
Q 038818 474 VVQEKLDG 481 (486)
Q Consensus 474 ~l~~~~~~ 481 (486)
.|.+.++.
T Consensus 507 rl~~~~~~ 514 (517)
T PRK13355 507 RLADFFSY 514 (517)
T ss_pred HHHHHHHH
Confidence 98887754
No 126
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.84 E-value=2.9e-18 Score=174.43 Aligned_cols=335 Identities=15% Similarity=0.111 Sum_probs=199.5
Q ss_pred HHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccC
Q 038818 90 LGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGREN 169 (486)
Q Consensus 90 ~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~ 169 (486)
+.+...+++..+...|..++...++++.+.+ ++|.+ .+++|+|||+|+..++.+..+
T Consensus 59 ~~~a~~~a~~~g~~~Y~~~~g~~~Lreaia~----~~~~~---------~vv~t~ggt~A~~~~~~all~---------- 115 (460)
T PRK13238 59 MSDRQWAAMMRGDEAYAGSRSYYRLEDAVKD----IFGYP---------YTIPTHQGRAAEQILFPVLIK---------- 115 (460)
T ss_pred hhHHHHHHHHhCCcccCCCCCHHHHHHHHHH----HhCCC---------cEEECCCHHHHHHHHHHHhCC----------
Confidence 4444444443444578888888888876544 44543 479999999999887766533
Q ss_pred CCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCC------CC--cccCHHHHHHHHHHHHHCCCccEEEEeecCCc
Q 038818 170 ISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKS------SS--FTLTPESLQAAIDLDIQAGLIPLFLCATVGTT 241 (486)
Q Consensus 170 ~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~------~~--~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt 241 (486)
+++ |+++...+.+....+...|. +++.+|+++. .. |.+|+++|+++|.+... .++.+|+++.++|
T Consensus 116 -pGD-Vii~~p~~~~~~~~i~~~G~---~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~--~~tk~Ivl~~p~N 188 (460)
T PRK13238 116 -KGD-VVPSNYHFDTTRAHIELNGA---TAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGA--ENVPFIVMTITNN 188 (460)
T ss_pred -CCC-EEccCCcccchHHHHHHcCC---EEEEEeccccccccccccccCCcCHHHHHHHHhhcCC--CceeEEEEecCCC
Confidence 555 65665533345555778898 9999998641 12 45999999999975321 1245799999999
Q ss_pred ccc-cc---CCchHHHHHHHHhCceEEeeccccc-hhccCc----cchhh-hcC-----CCCCCceeeccccccCCCCcc
Q 038818 242 AIT-TV---DPLGPLCDIAKRYSIWVHVDAAYAG-SACICP----EFRHF-IDG-----IEGADSFSLNAHKWFFTTLDC 306 (486)
Q Consensus 242 ~~G-~i---dpl~~I~~i~~~~g~~lhvD~a~g~-~~~~~~----~~~~~-~~~-----~~~aDsi~~~~hK~l~~p~~~ 306 (486)
++| .+ +++++|+++|++||+++++|+|+.. ..++.. .+... +.. .+.+|++++++||.+++|.|
T Consensus 189 ptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~G- 267 (460)
T PRK13238 189 SAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIG- 267 (460)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcce-
Confidence 998 44 5578999999999999999998743 122211 01110 000 14699999999999999985
Q ss_pred eEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCC-chHHHHHHHH-hchHHHHHHHHHHHHHHHHHH
Q 038818 307 CCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFR-ALKLWLVLRS-FGVANLRNFLRSHVRMAQLFQ 384 (486)
Q Consensus 307 g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~-~l~~~~~l~~-~g~~g~~~~~~~~~~~a~~l~ 384 (486)
|++++++++...+.-.....+ .. +...++-... ..++..+++. ... +..+...+.+++|.
T Consensus 268 G~i~~~d~~l~~~~~~~~~~~--~g------------~~t~~g~~~~~~~Ala~~l~e~~~~----~~~~~~~~~~~~l~ 329 (460)
T PRK13238 268 GLLCFRDEDLFTECRTLCILY--EG------------FPTYGGLAGRDMEALAVGLYEGMDE----DYLAYRIGQVEYLG 329 (460)
T ss_pred eEEEcChHHHHHHhhhccccc--CC------------cccccCcHHHHHHHHHhhHHHhhCh----HHHHHHHHHHHHHH
Confidence 888888765554321111000 00 0011111111 1122222221 122 23344455678999
Q ss_pred HHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHH-HhcCcEEEeeeeE-------CC------
Q 038818 385 ELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESI-NASGQLYVSHGMV-------AG------ 450 (486)
Q Consensus 385 ~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~-------~~------ 450 (486)
+.|++. |+.++.|.....+...+.......+ ..... ...+...| .+.|+..+..+.+ .+
T Consensus 330 ~~L~~~-G~~~~~p~Gg~~v~~d~~~~~~~~~----~~~~~--~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~ 402 (460)
T PRK13238 330 EGLEEA-GVPIQTPAGGHAVFVDAGKFLPHIP----AEQFP--AQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAP 402 (460)
T ss_pred HHHHHC-CCCeEccCCceEEEEEchhcCCCCC----CCCCc--hHHHHHHHHHHcCeeeecccceecccCCCCccccCCc
Confidence 999886 8998865544333333322100000 00001 13344444 3567655444322 12
Q ss_pred EeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 451 IYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 451 ~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
...+|+++.-..-|.+++|.+.+.|+++.+
T Consensus 403 ~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~ 432 (460)
T PRK13238 403 AELLRLAIPRRVYTQSHMDYVAEALKAVKE 432 (460)
T ss_pred cceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence 478999995434477799999999998864
No 127
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.84 E-value=9.8e-19 Score=175.05 Aligned_cols=318 Identities=14% Similarity=0.086 Sum_probs=195.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ 186 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 186 (486)
.+|...++|+. +++++|.+ .+++++|||+|+..++.+..-. +++.|+++..+|.+..
T Consensus 31 ~g~~~~~le~~----la~~~g~~---------~~v~~~sgt~al~lal~al~~~----------~Gd~Viv~~~~~~~~~ 87 (379)
T PRK11658 31 TGPKNQALEQA----FCQLTGNQ---------HAIAVSSATAGMHITLMALGIG----------PGDEVITPSLTWVSTL 87 (379)
T ss_pred CCHhHHHHHHH----HHHHhCCC---------eEEEECCHHHHHHHHHHHcCCC----------CCCEEEECCCcHHHHH
Confidence 46666666655 66677764 3588899999988777665211 6778899999999999
Q ss_pred HHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEee
Q 038818 187 KAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVD 266 (486)
Q Consensus 187 ~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD 266 (486)
.++...|+ +++.++++++ ++.+|+++|++++.+.+ .+|+.+ +++|...|+++|.++|+++|+++++|
T Consensus 88 ~~~~~~G~---~~v~vd~~~~-~~~~d~~~l~~~i~~~t------kav~~~---~~~G~~~d~~~i~~~a~~~gi~vi~D 154 (379)
T PRK11658 88 NMIVLLGA---TPVMVDVDRD-TLMVTPEAIEAAITPRT------KAIIPV---HYAGAPADLDAIRAIGERYGIPVIED 154 (379)
T ss_pred HHHHHcCC---EEEEEecCCC-cCCcCHHHHHHhcccCC------eEEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEE
Confidence 99999999 9999999863 46899999999987543 245533 45899999999999999999999999
Q ss_pred ccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhc--CCcccccCccC-CCCCccCCCC
Q 038818 267 AAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALS--TNPEFLRNKAS-DSKQVVDYKD 343 (486)
Q Consensus 267 ~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~--~~~~y~~~~~~-~~~~~~~~~~ 343 (486)
+|++.+....... + +-.+.+.++++.+|.+.++ ..|++++++++...+... ....+...... .......+..
T Consensus 155 ~a~a~g~~~~~~~---~-g~~g~~~~Sf~~~K~l~~g-~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 229 (379)
T PRK11658 155 AAHAVGTYYKGRH---I-GARGTAIFSFHAIKNITCA-EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEV 229 (379)
T ss_pred CCCccCCeECCee---c-CCCCCEEEeCCCCCcCccc-CceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCccee
Confidence 9997544332211 1 1124578899999998764 355566666655433221 11101000000 0000000000
Q ss_pred ccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCC-----eeEEEEEeecCCCCCCCC
Q 038818 344 WQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRN-----FAVVCFRVLPSASGLGDG 418 (486)
Q Consensus 344 ~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-----~~~v~f~~~~~~~~~~~~ 418 (486)
...+..+....+-+++...-.+++++..++..++++++.+.|++++...+..+.. ..++++++.+...
T Consensus 230 --~~~G~n~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 302 (379)
T PRK11658 230 --LTPGYKYNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEERC----- 302 (379)
T ss_pred --eccccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCccc-----
Confidence 0112122222333444444457899999999999999999999886432322211 2345556542110
Q ss_pred CCccchHHHHHHHHHHHHhcCcEEE---eeee----EC--------------CEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 038818 419 KANEGANELNRKLLESINASGQLYV---SHGM----VA--------------GIYFIRFAVGATLTEDRHVIAAWKVVQE 477 (486)
Q Consensus 419 ~~~~~~~~~~~~l~~~l~~~g~~~~---~~~~----~~--------------~~~~lR~~~~~~~tt~~did~~i~~l~~ 477 (486)
+....++.+.|.++|+..- .+.. +. ....+-+- +++..+++|++++++.|++
T Consensus 303 ------~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP-~~~~l~~~~~~~i~~~i~~ 375 (379)
T PRK11658 303 ------GISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLP-LFPDMTDADVDRVITALQQ 375 (379)
T ss_pred ------cCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEcc-CCCCCCHHHHHHHHHHHHH
Confidence 0113356666666675211 0100 00 01223332 4788999999999999998
Q ss_pred HH
Q 038818 478 KL 479 (486)
Q Consensus 478 ~~ 479 (486)
+.
T Consensus 376 ~~ 377 (379)
T PRK11658 376 IA 377 (379)
T ss_pred HH
Confidence 65
No 128
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.84 E-value=3.2e-18 Score=176.10 Aligned_cols=322 Identities=12% Similarity=0.106 Sum_probs=206.3
Q ss_pred cccChhhHHHHHHHHHHHHHHcC----CCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCC
Q 038818 105 WMSSPAATELENIVMDWLGEMLK----LPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQ 180 (486)
Q Consensus 105 ~~~~~~~~~le~~~~~~l~~l~g----~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~ 180 (486)
|....+..++.+.+.+|+.+.+| ++++ .+++|+|+++++..++.+..+ +++.|+++..
T Consensus 90 y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe-------~Ivit~Ga~~al~~l~~~l~~-----------pGD~Vlv~~P 151 (496)
T PLN02376 90 FQDYHGLKKFRQAIAHFMGKARGGKVTFDPE-------RVVMSGGATGANETIMFCLAD-----------PGDVFLIPSP 151 (496)
T ss_pred cCCCCCcHHHHHHHHHHHHHHhCCCCcCChh-------hEEEccchHHHHHHHHHHhCC-----------CCCEEEECCC
Confidence 33444567898999999999887 4443 789999999998777666544 6788899999
Q ss_pred CchHHHHHHH-HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHH
Q 038818 181 THSALQKAAQ-IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIA 256 (486)
Q Consensus 181 ~H~s~~~a~~-~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~ 256 (486)
.+..+...+. ..|+ +++.||++.++++.+|+++++++++...+.+..+.+|+++.++||||.+-+ +++|+++|
T Consensus 152 ~Y~~~~~~~~~~~G~---~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a 228 (496)
T PLN02376 152 YYAAFDRDLRWRTGV---EIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFV 228 (496)
T ss_pred CccchHHHHHhhCCC---EEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHH
Confidence 9999888777 4799 999999975456899999999887655444445667888899999999966 67788899
Q ss_pred HHhCceEEeeccccchhccCccchhh---hcCCC----CCC--ceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcc
Q 038818 257 KRYSIWVHVDAAYAGSACICPEFRHF---IDGIE----GAD--SFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPE 326 (486)
Q Consensus 257 ~~~g~~lhvD~a~g~~~~~~~~~~~~---~~~~~----~aD--si~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~ 326 (486)
++||+++++|.+|+......+.+... ..... ..+ .+..++.|.++ ...-+|+++..++.... .......
T Consensus 229 ~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~-~~~~~~~ 307 (496)
T PLN02376 229 TRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVS-CARKMSS 307 (496)
T ss_pred HHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHH-HHHHHhh
Confidence 99999999999998754322222221 11101 112 23568999997 44679998886554432 2211110
Q ss_pred cccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHH-----HHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCe
Q 038818 327 FLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVAN-----LRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNF 401 (486)
Q Consensus 327 y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g-----~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~ 401 (486)
+. ....+..+++...+.... +.+..++..+..+.+.+.|++. ++++.. +..
T Consensus 308 ~~----------------------~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~~~~-~~a 363 (496)
T PLN02376 308 FG----------------------LVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA-DIACLT-SNA 363 (496)
T ss_pred cC----------------------CCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccC-CCc
Confidence 10 012233333333332222 2333455566777788888875 677653 455
Q ss_pred eEEEE-EeecCCCCCCCCCCccchHHHHHHHHHHHHhc-CcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 038818 402 AVVCF-RVLPSASGLGDGKANEGANELNRKLLESINAS-GQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQE 477 (486)
Q Consensus 402 ~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~~ 477 (486)
+.++| .+..... .....+...++.+.+.++ |+.+.++..+. +.+++|+++.+ .+++.++..++.|++
T Consensus 364 G~flwi~l~~~~~-------~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~--~~~~~l~~al~rl~~ 434 (496)
T PLN02376 364 GLFAWMDLRHLLR-------DRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFAN--MDDDTLHVALGRIQD 434 (496)
T ss_pred eEEEEEEchhhhc-------cCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeC--CCHHHHHHHHHHHHH
Confidence 45444 4432100 000011123566666654 66544443342 36799999964 346789999999988
Q ss_pred HHHH
Q 038818 478 KLDG 481 (486)
Q Consensus 478 ~~~~ 481 (486)
++++
T Consensus 435 ~l~~ 438 (496)
T PLN02376 435 FVSK 438 (496)
T ss_pred HHHH
Confidence 7753
No 129
>PRK08363 alanine aminotransferase; Validated
Probab=99.84 E-value=3.3e-18 Score=172.95 Aligned_cols=334 Identities=10% Similarity=0.050 Sum_probs=212.0
Q ss_pred HHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccc
Q 038818 88 GFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGR 167 (486)
Q Consensus 88 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 167 (486)
..+.+.+...+......|...+...++++.+.+|+.+.+|..-+ ..+.++|+|+++++..++.+...
T Consensus 49 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-----~~~i~it~G~~~al~~~~~~~~~-------- 115 (398)
T PRK08363 49 EHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDIT-----PDDVRVTAAVTEALQLIFGALLD-------- 115 (398)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCC-----hhhEEEeCCHHHHHHHHHHHhCC--------
Confidence 33444554444322234555566788999999998887775322 12789999999988777665533
Q ss_pred cCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEE-ecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 168 ENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAI-KTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 168 ~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v-~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
+++.|+++..+|......++.+|. .++.+ +.++ +.+.+|++.|++++.+. +.+|+++.++|++|.+
T Consensus 116 ---~gd~Vl~~~p~y~~~~~~~~~~g~---~~v~~~~~~~-~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~ 182 (398)
T PRK08363 116 ---PGDEILIPGPSYPPYTGLVKFYGG---VPVEYRTIEE-EGWQPDIDDIRKKITEK------TKAIAVINPNNPTGAL 182 (398)
T ss_pred ---CCCEEEEcCCCCcchHHHHHHcCC---EEEEeccccc-cCCcCCHHHHHhhCCcc------eEEEEEECCCCCCCcC
Confidence 677888899999999999999998 88877 5554 34689999999888653 3467788999999988
Q ss_pred CC---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCC-Cce-eeccccccC-CCCcceEEEee-CchHHHH
Q 038818 247 DP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGA-DSF-SLNAHKWFF-TTLDCCCLWVK-NPNALIK 319 (486)
Q Consensus 247 dp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~a-Dsi-~~~~hK~l~-~p~~~g~~~~~-~~~~~~~ 319 (486)
-+ +++|+++|+++|+++++|++|+.... ...... +..+... ..+ ..+++|+++ ....+|++++. ++.....
T Consensus 183 ~~~~~~~~l~~~a~~~~~~li~Deay~~~~~-~~~~~~-~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~ 260 (398)
T PRK08363 183 YEKKTLKEILDIAGEHDLPVISDEIYDLMTY-EGKHVS-PGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAE 260 (398)
T ss_pred cCHHHHHHHHHHHHHcCeEEEEhhhhhhhcc-CCcccC-HHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHHH
Confidence 66 88999999999999999999976432 111111 1111122 233 567899955 55678998873 3322221
Q ss_pred HhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEec
Q 038818 320 ALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVA 397 (486)
Q Consensus 320 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 397 (486)
.......+... .. ....+...++...+ ..+.+++..++..+..+++.+.|.+++++++.
T Consensus 261 l~~~~~~~~~~--------------~~----~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~- 321 (398)
T PRK08363 261 VREAIDKLARI--------------RL----CPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGISTT- 321 (398)
T ss_pred HHHHHHHHhcc--------------cc----cCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCCEec-
Confidence 11100000000 00 01222222222222 34667777888888899999999988887754
Q ss_pred CCCeeEEEE-EeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHH
Q 038818 398 PRNFAVVCF-RVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKV 474 (486)
Q Consensus 398 ~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~ 474 (486)
+|..+.+.| ++.+... . +. ...+.+.+.++|+.+.++..+. +..++|+++. .+++++++.++.
T Consensus 322 ~p~g~~~~~~~l~~~~~--------~--~~-~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~---~~~~~l~~~l~~ 387 (398)
T PRK08363 322 KPQGAFYIFPRIEEGPW--------K--DD-KEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFL---PPVEILEEAMDR 387 (398)
T ss_pred CCCeEEEEEEEeccCCC--------C--CH-HHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec---CCHHHHHHHHHH
Confidence 566676666 4443100 0 00 1122344566787655544443 3569999984 247789999999
Q ss_pred HHHHHHHH
Q 038818 475 VQEKLDGI 482 (486)
Q Consensus 475 l~~~~~~l 482 (486)
|++++++.
T Consensus 388 l~~~~~~~ 395 (398)
T PRK08363 388 FEEFMRER 395 (398)
T ss_pred HHHHHHHh
Confidence 99887654
No 130
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.84 E-value=4.8e-19 Score=177.00 Aligned_cols=318 Identities=16% Similarity=0.154 Sum_probs=208.4
Q ss_pred ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCC
Q 038818 102 GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQT 181 (486)
Q Consensus 102 ~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~ 181 (486)
...|....+...+++.+.+|+.+..|.+.+. ...+++++|+.+++..+...... .++..|+++...
T Consensus 37 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-----~~~i~~~~G~~~~~~~~~~~~~~---------~~~~~vlv~~P~ 102 (363)
T PF00155_consen 37 FLGYPPPQGYPELREAIADFLGRRYGVPVDP-----EANILVTSGAQAALFLLLRLLKI---------NPGDTVLVPDPC 102 (363)
T ss_dssp CTSSTCTTHHHHHHHHHHHHHHHHHTHHTTG-----GEGEEEESHHHHHHHHHHHHHHS---------STTSEEEEEESS
T ss_pred cccCCCchhhHHHHHHHHHHhhhccCccccc-----ceEEEEecccccchhhhhhcccc---------cccccceecCCc
Confidence 3456666667889999888888666665432 11455555555555544443310 156778889999
Q ss_pred chHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCc---hHHHHHHHH
Q 038818 182 HSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPL---GPLCDIAKR 258 (486)
Q Consensus 182 H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl---~~I~~i~~~ 258 (486)
|..+...++..|+ +++.+|++..+++.+|+++|++.+++...++..+.+|+++.++||||..-+. ++|+++|++
T Consensus 103 y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~ 179 (363)
T PF00155_consen 103 YPSYIEAARLLGA---EVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELARE 179 (363)
T ss_dssp STHHHHHHHHTTS---EEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHH
T ss_pred cccccccccccCc---eeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcc
Confidence 9999999999999 9999997654578999999999999865544335678889999999988665 555555999
Q ss_pred hCceEEeeccccchhccCccchhhhcCCC-CC-CceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCCC
Q 038818 259 YSIWVHVDAAYAGSACICPEFRHFIDGIE-GA-DSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASDS 335 (486)
Q Consensus 259 ~g~~lhvD~a~g~~~~~~~~~~~~~~~~~-~a-Dsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~ 335 (486)
||+++++|.+|+.+....+........++ .. ..++.++.|.++.| ...|++++ ++......-.....+...
T Consensus 180 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~-~~~~~~~l~~~~~~~~~~----- 253 (363)
T PF00155_consen 180 YNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVA-PPELIERLRRFQRSGLSS----- 253 (363)
T ss_dssp TTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEE-EHHHHHHHHHHHHHTTSS-----
T ss_pred cccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccc-hhhhhhhhhhcccccccc-----
Confidence 99999999999876554322111011111 22 36778899998866 45788888 443332211111111100
Q ss_pred CCccCCCCccccCCCCCCchHHHHHHHHhc--hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCC
Q 038818 336 KQVVDYKDWQITLSRRFRALKLWLVLRSFG--VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSAS 413 (486)
Q Consensus 336 ~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~ 413 (486)
......+...+...+ .+.+++..++..++++++.+.|++. ++.+..++ .+++++...+.
T Consensus 254 ---------------~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~-~~~~~~~~~~~-- 314 (363)
T PF00155_consen 254 ---------------SPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPPE-AGFFLWVRLDP-- 314 (363)
T ss_dssp ---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHS-BSSEEEEEESH--
T ss_pred ---------------chhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeecc-CccEEEEEccc--
Confidence 001111122222222 1267788888999999999999888 89987655 56666654431
Q ss_pred CCCCCCCccchHHHHHHHHHHHHhc-CcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHH
Q 038818 414 GLGDGKANEGANELNRKLLESINAS-GQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVV 475 (486)
Q Consensus 414 ~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l 475 (486)
.....+.+.|.++ |+.+.++..+...+++|+++ ...+++++++++++|
T Consensus 315 ------------~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~--a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 315 ------------NDAEELAQELLEEYGILVRPGSYFGVPGYIRISL--ASHSEEDLEEALERL 363 (363)
T ss_dssp ------------HHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG--GCSCHHHHHHHHHHH
T ss_pred ------------chHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe--ccCCHHHHHHHHhhC
Confidence 1345677778777 87655544434477899998 256777999999876
No 131
>PRK05968 hypothetical protein; Provisional
Probab=99.84 E-value=1.3e-18 Score=174.20 Aligned_cols=227 Identities=15% Similarity=0.172 Sum_probs=158.1
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH----HHHHHHHc
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA----LQKAAQIA 192 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~a~~~~ 192 (486)
++.+.+++++|.+. .+++++|+.|+..++.+... +++.|+++...|.+ +...+...
T Consensus 67 ~le~~lA~l~g~~~---------av~~~sG~~Ai~~al~al~~-----------~Gd~Vl~~~~~y~~t~~~~~~~~~~~ 126 (389)
T PRK05968 67 AFEEMLAKLEGAED---------ARGFASGMAAISSTVLSFVE-----------PGDRIVAVRHVYPDAFRLFETILKRM 126 (389)
T ss_pred HHHHHHHHHhCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHHHHHHHHHHHc
Confidence 34456788888753 46677888888777654322 56677778777765 33566778
Q ss_pred CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccch
Q 038818 193 GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGS 272 (486)
Q Consensus 193 G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~ 272 (486)
|+ +++.++.+ |++++++++ +.+ .+|+++.++++++.+.|+++|+++|+++|+++++|++|+.+
T Consensus 127 G~---~v~~vd~~-------d~~~l~~~i-~~t------klV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~ 189 (389)
T PRK05968 127 GV---EVDYVDGR-------DEEAVAKAL-PGA------KLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASP 189 (389)
T ss_pred Cc---eEEEeCCC-------CHHHHHHhc-ccC------CEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcch
Confidence 88 88887642 889999887 322 36888889999999999999999999999999999999765
Q ss_pred hccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCC
Q 038818 273 ACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSR 350 (486)
Q Consensus 273 ~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr 350 (486)
....+ .. .++|.++.+++|++++|.+ .|+++ .+++.+.+......+++. -
T Consensus 190 ~~~~p-~~------~g~Divv~S~tK~l~g~~~~~gG~i~-~~~~~~~~l~~~~~~~~g--------------------~ 241 (389)
T PRK05968 190 VFQRP-IT------LGVDLVIHSASKYLGGHSDTVAGVVA-GSKEHIARINAEAYPYLG--------------------A 241 (389)
T ss_pred hccCc-hh------cCCcEEEeeccccccCCCCeEEEEEE-ECHHHHHHHHHHHHHhCC--------------------C
Confidence 43222 11 2689999999999998754 56555 444443322211111111 0
Q ss_pred CCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC------------CeeEEEEEeec
Q 038818 351 RFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR------------NFAVVCFRVLP 410 (486)
Q Consensus 351 ~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~------------~~~~v~f~~~~ 410 (486)
......+|..++ +.+.+..++++..++++++.+.|+++|+++.+..| ..++++|.+.+
T Consensus 242 ~~~~~~A~~~l~--~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~ 311 (389)
T PRK05968 242 KLSPFEAWLLLR--GLRTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFRE 311 (389)
T ss_pred CCChHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECC
Confidence 123355565554 44677889999999999999999999998765533 13588998863
No 132
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.83 E-value=6.7e-18 Score=170.17 Aligned_cols=333 Identities=15% Similarity=0.167 Sum_probs=205.9
Q ss_pred HHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcccc
Q 038818 89 FLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRE 168 (486)
Q Consensus 89 ~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~ 168 (486)
.+.+.+...+......|....+..++++.+.+++.+.+|.+... ....++|+|+++++..++.....
T Consensus 47 ~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~----~~~i~it~G~~~al~~~~~~~~~--------- 113 (391)
T PRK07309 47 HVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAP----ENEILVTIGATEALSASLTAILE--------- 113 (391)
T ss_pred HHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCChHHHHHHHHHHhcC---------
Confidence 34444443332222345444456789999999998888763210 12689999999998777665432
Q ss_pred CCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC-
Q 038818 169 NISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD- 247 (486)
Q Consensus 169 ~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id- 247 (486)
+++.|++...+|..+...++..|. +++.+|++++ ++.+|++.|+++++... ..+.+|+++.++|++|.+-
T Consensus 114 --~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~~~~~~---~~~~~i~l~~P~NPtG~~~s 184 (391)
T PRK07309 114 --PGDKVLLPAPAYPGYEPIVNLVGA---EIVEIDTTEN-DFVLTPEMLEKAILEQG---DKLKAVILNYPANPTGVTYS 184 (391)
T ss_pred --CCCEEEEeCCCCcchHHHHHHcCC---EEEEEecCCc-CCcCCHHHHHHHhhccC---CCeEEEEEECCCCCCCcCcC
Confidence 566788888899889999999999 9999998752 46899999999986421 1245778888999999874
Q ss_pred --CchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCC
Q 038818 248 --PLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTN 324 (486)
Q Consensus 248 --pl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~ 324 (486)
++++|+++|++||+++++|++|+......+...........--.+..+++|.++.| ..+|+++... +.+.+....
T Consensus 185 ~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~-~~~~~~~~~- 262 (391)
T PRK07309 185 REQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAPA-EFTAQLIKS- 262 (391)
T ss_pred HHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeCH-HHHHHHHHH-
Confidence 58999999999999999999997644311111111111111125567799998744 3477777653 333322111
Q ss_pred cccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCee
Q 038818 325 PEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFA 402 (486)
Q Consensus 325 ~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~ 402 (486)
..+... ....+...++...+ +........++..+.++++.+.|++. ++++. +|..+
T Consensus 263 ~~~~~~--------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~p~gg 320 (391)
T PRK07309 263 HQYLVT--------------------AATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDL-GFKII-KPDGA 320 (391)
T ss_pred Hhhccc--------------------CCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHC-CCeec-CCCee
Confidence 111110 01122222333333 22223344556667788899999887 67765 44445
Q ss_pred EEEE-EeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 403 VVCF-RVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 403 ~v~f-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
.+.+ ++.+.. ......+.+++. +.|+.+..+..+. +..++|++++. +.+++++.++.|.++
T Consensus 321 ~~~~~~l~~~~------------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~---~~~~l~~~i~~l~~~ 385 (391)
T PRK07309 321 FYIFAKIPAGY------------NQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAA---SMETIKEAMKRLKEY 385 (391)
T ss_pred EEEEEECCCCC------------CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC---CHHHHHHHHHHHHHH
Confidence 4433 333210 001234554443 5676544443332 35799999863 467999999999988
Q ss_pred HHHH
Q 038818 479 LDGI 482 (486)
Q Consensus 479 ~~~l 482 (486)
++++
T Consensus 386 ~~~~ 389 (391)
T PRK07309 386 MEEH 389 (391)
T ss_pred HHhh
Confidence 8664
No 133
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.83 E-value=3.1e-18 Score=170.91 Aligned_cols=292 Identities=13% Similarity=0.071 Sum_probs=186.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHc
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIA 192 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 192 (486)
.+..++++.+++++|.+. .+++++|+++++.++.+... +++.|+++...|.+...+++..
T Consensus 61 ~~~~~l~~~la~~~~~~~---------~i~~~~G~~~~~~~l~~~~~-----------~gd~v~~~~~~~~~~~~~~~~~ 120 (360)
T TIGR00858 61 PLHEELEEELAEWKGTEA---------ALLFSSGYLANVGVISALVG-----------KGDLILSDALNHASLIDGCRLS 120 (360)
T ss_pred HHHHHHHHHHHHHhCCCC---------EEEECchHHHHHHHHHHhCC-----------CCCEEEEEccccHHHHHHHHhc
Confidence 444556677788777542 35556668887765544322 5677888899999999999999
Q ss_pred CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccch
Q 038818 193 GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGS 272 (486)
Q Consensus 193 G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~ 272 (486)
|+ +++.++ .+|+++|++.+++... ..+.+|+.....+++|.+.|+++|.++|+++|+++++|++|+.+
T Consensus 121 g~---~~~~~~-------~~d~~~l~~~~~~~~~--~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~ 188 (360)
T TIGR00858 121 GA---RVRRYR-------HNDVEHLERLLEKNRG--ERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTG 188 (360)
T ss_pred CC---ceEEec-------CCCHHHHHHHHHHccc--CCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECccccc
Confidence 98 887775 2589999999875320 12356777778899999999999999999999999999999744
Q ss_pred hccCccc-hhhhcCC--CCCCceeeccccccCCCCcceEEEeeCchHHHHHhc-CCcccccCccCCCCCccCCCCccccC
Q 038818 273 ACICPEF-RHFIDGI--EGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALS-TNPEFLRNKASDSKQVVDYKDWQITL 348 (486)
Q Consensus 273 ~~~~~~~-~~~~~~~--~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~-~~~~y~~~~~~~~~~~~~~~~~~~~~ 348 (486)
....... .....++ ...|.+..+++|+++.+ | |+++.+ ++... .+. ....+. ...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~-g-G~~~~~-~~~~~-~~~~~~~~~~-----------------~~~ 247 (360)
T TIGR00858 189 VLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSY-G-AYVAGS-QALID-YLINRARTLI-----------------FST 247 (360)
T ss_pred CcCCCCCchHHhcCCCccCCcEEEEechhhhhcc-C-cEEEcC-HHHHH-HHHHhCccce-----------------ecC
Confidence 3211100 0011122 25678888999999763 3 665543 33332 221 111111 011
Q ss_pred CCC-CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHH
Q 038818 349 SRR-FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANEL 427 (486)
Q Consensus 349 sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~ 427 (486)
+.. ....++..++..+ +...++.++..++++++.+.|+++ ++++. ++..+++.+.+.. ...
T Consensus 248 ~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~--------------~~~ 309 (360)
T TIGR00858 248 ALPPAVAAAALAALELI--QEEPWRREKLLALIARLRAGLEAL-GFTLM-PSCTPIVPVIIGD--------------NAS 309 (360)
T ss_pred CCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHHc-CCccC-CCCCCEEEEEeCC--------------HHH
Confidence 111 1112223334332 223566788899999999999887 57765 4455666666542 112
Q ss_pred HHHHHHHHHhcCcEEEeeee---ECCEeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 428 NRKLLESINASGQLYVSHGM---VAGIYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 428 ~~~l~~~l~~~g~~~~~~~~---~~~~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
.+++.+.|.++|+.+..... ..+..++|+++. ..++++|+++++++|+
T Consensus 310 ~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~-~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 310 ALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLS-AAHTPGDIDRLAEALK 360 (360)
T ss_pred HHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEc-CCCCHHHHHHHHHhhC
Confidence 34677788888875432211 123468999995 4567889999998873
No 134
>PRK12414 putative aminotransferase; Provisional
Probab=99.83 E-value=4.6e-18 Score=170.93 Aligned_cols=326 Identities=12% Similarity=0.112 Sum_probs=205.6
Q ss_pred HHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccc
Q 038818 88 GFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGR 167 (486)
Q Consensus 88 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 167 (486)
..+.+.+...+......|....+...+.+.+.+|+++++|.+... ....++|+|+++++..++.+...
T Consensus 45 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~----~~~i~it~g~~~al~~~~~~l~~-------- 112 (384)
T PRK12414 45 PALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDP----ASEVTVIASASEGLYAAISALVH-------- 112 (384)
T ss_pred HHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEECChHHHHHHHHHHhcC--------
Confidence 334444443332222345555567889999999999999985210 01589999999988766665433
Q ss_pred cCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc-
Q 038818 168 ENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV- 246 (486)
Q Consensus 168 ~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i- 246 (486)
+++.|+++..+|......++..|. +++.+|+++ +++.+|++.|++++++. +.+|+++.++|+||.+
T Consensus 113 ---~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~-~~~~~d~~~l~~~l~~~------~~~v~i~~p~NPTG~~~ 179 (384)
T PRK12414 113 ---PGDEVIYFEPSFDSYAPIVRLQGA---TPVAIKLSP-EDFRVNWDEVAAAITPR------TRMIIVNTPHNPSATVF 179 (384)
T ss_pred ---CCCEEEEeCCCccchHHHHHHcCC---EEEEEecCc-cccccCHHHHHhhcCcc------cEEEEEcCCCCCCCcCC
Confidence 667788899999888888999999 999999875 35789999999988643 3467788999999997
Q ss_pred --CCchHHHHHHHHhCceEEeeccccchhccCccchhh--hcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHh
Q 038818 247 --DPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHF--IDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKAL 321 (486)
Q Consensus 247 --dpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~ 321 (486)
+++++|+++|++||+++++|++|.-........... +.....--.+..++.|.++.| .-+|+++..++ ... .+
T Consensus 180 s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~-l~~-~l 257 (384)
T PRK12414 180 SAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAE-LMD-EI 257 (384)
T ss_pred CHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCHH-HHH-HH
Confidence 678999999999999999999997543211111111 111111125677789999744 56788876543 322 12
Q ss_pred cCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhch-HHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCC
Q 038818 322 STNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGV-ANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRN 400 (486)
Q Consensus 322 ~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~ 400 (486)
.....+. ......+..+++...+.. ..+.+..+...+.++.+.+.|++. ++++. ++.
T Consensus 258 ~~~~~~~--------------------~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~ 315 (384)
T PRK12414 258 RKVHQFM--------------------VFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGS-RFELL-PSE 315 (384)
T ss_pred HHHHhhe--------------------ecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhC-CCeec-CCC
Confidence 1100000 001122333333333321 234455667778888899999887 67764 555
Q ss_pred eeEEEE-EeecCCCCCCCCCCccchHHHHHHHH-HHHHhcCcEEEeeeeEC--C--EeEEEEEecCCCCcHHHHHHHHHH
Q 038818 401 FAVVCF-RVLPSASGLGDGKANEGANELNRKLL-ESINASGQLYVSHGMVA--G--IYFIRFAVGATLTEDRHVIAAWKV 474 (486)
Q Consensus 401 ~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~~g~~~~~~~~~~--~--~~~lR~~~~~~~tt~~did~~i~~ 474 (486)
.+.+.| ++.+.. .. ...++. +.+.+.|+.+..+..+. + .+++|+++.. +++++++.++.
T Consensus 316 gg~~~~~~~~~~~--------~~----~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~---~~~~~~~~~~r 380 (384)
T PRK12414 316 GSFFMLARFRHFS--------DE----SDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK---DDATLVEGARR 380 (384)
T ss_pred cceEEEEcccccC--------CC----CHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC---CHHHHHHHHHH
Confidence 555555 443210 00 012333 44556788655544332 2 4689999963 47788888877
Q ss_pred HHH
Q 038818 475 VQE 477 (486)
Q Consensus 475 l~~ 477 (486)
|.+
T Consensus 381 l~~ 383 (384)
T PRK12414 381 LCS 383 (384)
T ss_pred Hhh
Confidence 764
No 135
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.83 E-value=9.2e-18 Score=169.81 Aligned_cols=332 Identities=15% Similarity=0.120 Sum_probs=202.9
Q ss_pred HHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcc
Q 038818 87 AGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIG 166 (486)
Q Consensus 87 ~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 166 (486)
+..+.+.+..... ....|....+..++.+.+.+++.+ .|.+.. ....++|+|+++++..++.....
T Consensus 45 ~~~~~~a~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~-~~~~~~-----~~~i~~t~G~~~al~~~~~~l~~------- 110 (397)
T PRK07568 45 PEVFFEAIKNYDE-EVLAYSHSQGIPELREAFAKYYKK-WGIDVE-----PDEILITNGGSEAILFAMMAICD------- 110 (397)
T ss_pred CHHHHHHHHHHhc-CCcCcCCCCCCHHHHHHHHHHHHH-hCCCCC-----cceEEEcCChHHHHHHHHHHhcC-------
Confidence 3445555554432 223454444566777777777763 443221 12689999999998776655432
Q ss_pred ccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcc-cCHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 167 RENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFT-LTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 167 ~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~-~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
+++.|+++...|......++..|+ +++.++++.++.+. .++++|++++++.+ .+|+++.++|++|.
T Consensus 111 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~g~~~~~~~~l~~~~~~~~------~~v~i~~p~NPtG~ 177 (397)
T PRK07568 111 ----PGDEILVPEPFYANYNGFATSAGV---KIVPVTTKIEEGFHLPSKEEIEKLITPKT------KAILISNPGNPTGV 177 (397)
T ss_pred ----CCCEEEEecCCCccHHHHHHHcCC---EEEEeecCcccCCCCCCHHHHHHhcCccc------eEEEEECCCCCCCc
Confidence 566777777777667777888899 99999986433334 36899998886543 36788889999999
Q ss_pred cCC---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCC-CC--ceeeccccccCC-CCcceEEEeeCchHHH
Q 038818 246 VDP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEG-AD--SFSLNAHKWFFT-TLDCCCLWVKNPNALI 318 (486)
Q Consensus 246 idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~-aD--si~~~~hK~l~~-p~~~g~~~~~~~~~~~ 318 (486)
+-+ +++|+++|+++|+++++|++|+.+..-.+...... .+.. .+ .+..+.+|.++. ...+|+++..++....
T Consensus 178 ~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~-~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~ 256 (397)
T PRK07568 178 VYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSAL-SLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIA 256 (397)
T ss_pred cCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChh-hcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHH
Confidence 864 78999999999999999999976532111111111 1111 22 445678999874 5568888876655443
Q ss_pred HHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe
Q 038818 319 KALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIV 396 (486)
Q Consensus 319 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 396 (486)
.........+ ....+...++...+ +.+.+++..+...+.++.+.+.|++++++.+.
T Consensus 257 ~~~~~~~~~~----------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 314 (397)
T PRK07568 257 AAMKLCQARL----------------------SPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGVVCE 314 (397)
T ss_pred HHHHHhhccC----------------------CCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCceec
Confidence 2211100000 01122222222222 34567777778888899999999988777654
Q ss_pred cCCCeeEE-EEEeecCCCCCCCCCCccchHHHHHHHHHHH--HhcCcEEEeeeeE---C--CEeEEEEEecCCCCcHHHH
Q 038818 397 APRNFAVV-CFRVLPSASGLGDGKANEGANELNRKLLESI--NASGQLYVSHGMV---A--GIYFIRFAVGATLTEDRHV 468 (486)
Q Consensus 397 ~~~~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l--~~~g~~~~~~~~~---~--~~~~lR~~~~~~~tt~~di 468 (486)
.|..+.+ .+++... ...++.+.+.++. .+.|+.+.++..+ . +..++|+++.. +++++
T Consensus 315 -~p~g~~~~~~~l~~~-----------~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~---~~~~~ 379 (397)
T PRK07568 315 -KPKGAFYIIAKLPVD-----------DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVL---NEEDL 379 (397)
T ss_pred -CCCcceEEEEecCCC-----------CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeC---CHHHH
Confidence 4444443 3444321 1123333332221 1246654443333 1 24689999852 46799
Q ss_pred HHHHHHHHHHHHHHh
Q 038818 469 IAAWKVVQEKLDGIL 483 (486)
Q Consensus 469 d~~i~~l~~~~~~l~ 483 (486)
++.++.|.+++++..
T Consensus 380 ~~~~~~l~~~l~~~~ 394 (397)
T PRK07568 380 KRAMEILKEALEKYN 394 (397)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999887654
No 136
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.83 E-value=6e-19 Score=176.05 Aligned_cols=285 Identities=19% Similarity=0.184 Sum_probs=190.2
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ 186 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 186 (486)
..|...++|+ .+++++|.+ ..+++++|++|+..++.+... +++.|+++...|.+..
T Consensus 38 ~~p~~~~le~----~la~l~g~~---------~a~~~~sG~~Ai~~~l~~l~~-----------~gd~Vl~~~~~y~~~~ 93 (369)
T cd00614 38 GNPTVDALEK----KLAALEGGE---------AALAFSSGMAAISTVLLALLK-----------AGDHVVASDDLYGGTY 93 (369)
T ss_pred CChhHHHHHH----HHHHHHCCC---------CEEEEcCHHHHHHHHHHHHcC-----------CCCEEEECCCCcchHH
Confidence 4455556665 567777754 458889999999888776643 5667888888887654
Q ss_pred H----HHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCce
Q 038818 187 K----AAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIW 262 (486)
Q Consensus 187 ~----a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~ 262 (486)
. .+...|+ ++..++.+ |++++++++++. +.+|+++.++|++|.+.|+++|+++|++||++
T Consensus 94 ~~~~~~~~~~g~---~~~~v~~~-------d~~~l~~~i~~~------~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~ 157 (369)
T cd00614 94 RLFERLLPKLGI---EVTFVDPD-------DPEALEAAIKPE------TKLVYVESPTNPTLKVVDIEAIAELAHEHGAL 157 (369)
T ss_pred HHHHHHHhhcCe---EEEEeCCC-------CHHHHHHhcCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence 3 4556677 88887653 688899888643 34788899999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC--cceEEEeeCchHHHHHhcCCcccccCccCCCCCccC
Q 038818 263 VHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL--DCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVD 340 (486)
Q Consensus 263 lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~--~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 340 (486)
++||++|+.+....+ .. .++|.++.+++|+++++. ..|+++.++++...+... ...++
T Consensus 158 livD~t~~~~~~~~~-~~------~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~-~~~~~------------ 217 (369)
T cd00614 158 LVVDNTFATPYLQRP-LE------LGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRF-LRLAL------------ 217 (369)
T ss_pred EEEECCCcchhcCCh-hh------hCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHH-HHHhh------------
Confidence 999999987644221 11 178999999999998764 367777666344322211 10010
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC-----------------CeeE
Q 038818 341 YKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR-----------------NFAV 403 (486)
Q Consensus 341 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------------~~~~ 403 (486)
+-......+|+.++.+ +.+..++++..++++++.+.|+++|+++.+.-| ..++
T Consensus 218 --------g~~~~p~~a~~~l~~l--~tl~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i 287 (369)
T cd00614 218 --------GTILSPFDAWLLLRGL--KTLPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGV 287 (369)
T ss_pred --------CCCCCHHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceE
Confidence 1112345566665544 667778899999999999999999877543322 3678
Q ss_pred EEEEeecCCCCCCCCCCccchHHHHHHHHHHHHh--cCc-------EEEeee--eE----------CC--EeEEEEEecC
Q 038818 404 VCFRVLPSASGLGDGKANEGANELNRKLLESINA--SGQ-------LYVSHG--MV----------AG--IYFIRFAVGA 460 (486)
Q Consensus 404 v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~g~-------~~~~~~--~~----------~~--~~~lR~~~~~ 460 (486)
++|.+.+. .+...++.+.|.- .+. +...+. .. .| .+.+|+|++-
T Consensus 288 ~s~~l~~~-------------~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGl 354 (369)
T cd00614 288 FSFELKGG-------------LEAAKKFLNALKLFSLAVSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGI 354 (369)
T ss_pred EEEEeCCC-------------HHHHHHHHHcCCcceEcccCCCCceeeeCCcccccccCCHHHHHhcCCCCCeEEEEeCc
Confidence 99988642 2333455554321 111 011111 00 12 4689999953
Q ss_pred CCCcHHHHHHHHHHHHHHH
Q 038818 461 TLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 461 ~~tt~~did~~i~~l~~~~ 479 (486)
||+|.+++.|++.+
T Consensus 355 -----E~~~dl~~dl~~al 368 (369)
T cd00614 355 -----EDVEDLIADLEQAL 368 (369)
T ss_pred -----CCHHHHHHHHHHhh
Confidence 47888888888764
No 137
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.83 E-value=8e-18 Score=169.86 Aligned_cols=309 Identities=12% Similarity=0.089 Sum_probs=192.4
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCc
Q 038818 103 FNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTH 182 (486)
Q Consensus 103 ~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 182 (486)
..|....+..++.+.+.+|+.+.+|.+.+. ....++|+|+++++..++.+... +++.|+++..+|
T Consensus 67 ~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~----~~~i~vt~G~~~al~~~~~~~~~-----------~gd~Vlv~~P~y 131 (394)
T PRK05942 67 HGYPPFEGTASFRQAITDWYHRRYGVELDP----DSEALPLLGSKEGLTHLALAYVN-----------PGDVVLVPSPAY 131 (394)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHCCCcCC----CCeEEEccChHHHHHHHHHHhCC-----------CCCEEEEcCCCC
Confidence 455544456789999999999888864321 01367899999988776655432 677888999999
Q ss_pred hHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHHHh
Q 038818 183 SALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAKRY 259 (486)
Q Consensus 183 ~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~~~ 259 (486)
......+...|+ +++.+|++.++++.+|+++|++.+.+. +.+|+++.++||||.+-+ +++|.++|+++
T Consensus 132 ~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~ 202 (394)
T PRK05942 132 PAHFRGPLIAGA---QIYPIILKPENDWLIDLSSIPEEVAQQ------AKILYFNYPSNPTTATAPREFFEEIVAFARKY 202 (394)
T ss_pred cchHHHHHHcCC---EEEEeecCCccCCccCHHHHHHhcccc------ceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHc
Confidence 988888888999 999999986555789999999988643 347777889999999977 88999999999
Q ss_pred CceEEeeccccchhccCccchhh--hcCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCC
Q 038818 260 SIWVHVDAAYAGSACICPEFRHF--IDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSK 336 (486)
Q Consensus 260 g~~lhvD~a~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 336 (486)
|+++++|++|+.+.......... +.+.........++.|.++ .+..+|+++.. +.... .+.....+...
T Consensus 203 ~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~-~~l~~-~l~~~~~~~~~------ 274 (394)
T PRK05942 203 EIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGN-RHIIQ-GLRTLKTNLDY------ 274 (394)
T ss_pred CeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecC-HHHHH-HHHHHHhhccc------
Confidence 99999999997544211111111 1111122344566789886 44568888764 33332 22110000000
Q ss_pred CccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEE-EEeecCCC
Q 038818 337 QVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVC-FRVLPSAS 413 (486)
Q Consensus 337 ~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~-f~~~~~~~ 413 (486)
+ ...+...++...+ ..+.+++..++..++.+++.+.|++. ++++. ++..+++. +.+.+..
T Consensus 275 ------------~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~~~~~~f~~~~~~~~~- 337 (394)
T PRK05942 275 ------------G--IFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGEL-GWNIP-PTKATMYLWVPCPVGM- 337 (394)
T ss_pred ------------C--CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCeec-CCCeeeEEEEECCCCC-
Confidence 0 0111112222222 24556677777788888999999876 67765 44555443 4443210
Q ss_pred CCCCCCCccchHHHHHHHHHH-HHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 414 GLGDGKANEGANELNRKLLES-INASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 414 ~~~~~~~~~~~~~~~~~l~~~-l~~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
+ ..++..+ +.++|+.+..+..+. +..++|+++.. +.+.+.+.++.|.
T Consensus 338 -----------~--~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~---~~~~l~~~l~~l~ 387 (394)
T PRK05942 338 -----------G--STDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIA---DCDRLGEALDRLK 387 (394)
T ss_pred -----------C--HHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecC---CHHHHHHHHHHHH
Confidence 0 1233333 345687544444332 35799999942 3334444444443
No 138
>PRK09082 methionine aminotransferase; Validated
Probab=99.83 E-value=1.8e-18 Score=174.15 Aligned_cols=325 Identities=10% Similarity=0.062 Sum_probs=209.3
Q ss_pred HHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcccc
Q 038818 89 FLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRE 168 (486)
Q Consensus 89 ~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~ 168 (486)
.+.+.+...+......|....+...+++.+.+++.+++|.+... ....++|+|+++|+..++.....
T Consensus 47 ~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~----~~~i~~t~G~~~al~~~~~~~~~--------- 113 (386)
T PRK09082 47 YLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDA----DSEITVTAGATEALFAAILALVR--------- 113 (386)
T ss_pred HHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCCHHHHHHHHHHHHcC---------
Confidence 34455555443333456555667889999999999999875321 01588999999998877765533
Q ss_pred CCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc--
Q 038818 169 NISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV-- 246 (486)
Q Consensus 169 ~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i-- 246 (486)
+++.|+++..+|.++..+++..|. +++.+|+++. ++.+|++++++++++. +.+|+++.++|+||.+
T Consensus 114 --~gd~Vli~~p~y~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~ 181 (386)
T PRK09082 114 --PGDEVIVFDPSYDSYAPAIELAGG---RAVRVALQPP-DFRVDWQRFAAAISPR------TRLIILNTPHNPSGTVWS 181 (386)
T ss_pred --CCCEEEEeCCCchhhHHHHHHcCC---EEEEEecCcc-cccCCHHHHHHhcCcc------ceEEEEeCCCCCCCcCCC
Confidence 667788899999999999999999 9999999753 5799999999988643 3467778899999977
Q ss_pred -CCchHHHHHHHHhCceEEeeccccchhccCccchhh--hcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhc
Q 038818 247 -DPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHF--IDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALS 322 (486)
Q Consensus 247 -dpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~ 322 (486)
+++++|.++|++||+++++|.+|+............ +.+...-..+..++.|.++.| ..+|+++..+ +.+. .+.
T Consensus 182 ~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~-~l~~-~~~ 259 (386)
T PRK09082 182 AADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPA-ALSA-EFR 259 (386)
T ss_pred HHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCH-HHHH-HHH
Confidence 778999999999999999999996543321111111 112222335566789999744 4578777643 3322 221
Q ss_pred CCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCC
Q 038818 323 TNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRN 400 (486)
Q Consensus 323 ~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~ 400 (486)
....+.. .....+...++...+ ..+.++++.+...++.+++.+.|++. ++++. ++.
T Consensus 260 ~~~~~~~--------------------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~~~ 317 (386)
T PRK09082 260 KVHQYNT--------------------FTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANS-RFKLL-PCE 317 (386)
T ss_pred HHHhhhc--------------------CCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC-CCccc-CCC
Confidence 1111100 011222222222222 34556677777788889999999885 67764 455
Q ss_pred eeEEEE-EeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC----CEeEEEEEecCCCCcHHHHHHHHHH
Q 038818 401 FAVVCF-RVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA----GIYFIRFAVGATLTEDRHVIAAWKV 474 (486)
Q Consensus 401 ~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~----~~~~lR~~~~~~~tt~~did~~i~~ 474 (486)
.+.+.+ ++.... .. + ..++.+.+. +.|+.+..+..+. +.+++|++++. +++++++.++.
T Consensus 318 g~~~~~~~~~~~~--------~~--~--~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~---~~~~l~~~~~r 382 (386)
T PRK09082 318 GTYFQLVDYSAIS--------DL--D--DVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAK---QEETLDAAAER 382 (386)
T ss_pred eeEEEEEeccccC--------CC--C--HHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecC---CHHHHHHHHHH
Confidence 555444 553210 00 1 234555543 5566544433332 24689999953 57788888888
Q ss_pred HHH
Q 038818 475 VQE 477 (486)
Q Consensus 475 l~~ 477 (486)
|++
T Consensus 383 l~~ 385 (386)
T PRK09082 383 LCQ 385 (386)
T ss_pred Hhh
Confidence 765
No 139
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.83 E-value=4e-18 Score=172.47 Aligned_cols=339 Identities=12% Similarity=0.060 Sum_probs=209.1
Q ss_pred HHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcccc
Q 038818 89 FLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRE 168 (486)
Q Consensus 89 ~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~ 168 (486)
.+.+.+...+......|....+..++.+.+.+++++.+|.+.. ....++|+|+++|+..++.+...
T Consensus 50 ~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~-----~~~i~~t~G~~~al~~~~~~~~~--------- 115 (402)
T PRK06107 50 HIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYA-----DNEITVGGGAKQAIFLALMATLE--------- 115 (402)
T ss_pred HHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCC-----hhhEEEeCCHHHHHHHHHHHhcC---------
Confidence 3455555555433344555455678888999999998887532 12689999999988777654322
Q ss_pred CCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC
Q 038818 169 NISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP 248 (486)
Q Consensus 169 ~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp 248 (486)
+++.|+++...++....++...|. .++.++++.++++.+|+++|++++.+. +.+|+++.++|+||.+-+
T Consensus 116 --~gd~vl~~~p~y~~y~~~~~~~~~---~~~~v~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~s 184 (402)
T PRK06107 116 --AGDEVIIPAPYWVSYPDMVLANDG---TPVIVACPEEQGFKLTPEALEAAITPR------TRWLILNAPSNPTGAVYS 184 (402)
T ss_pred --CCCEEEEecCCCcCHHHHHHHcCC---EEEEecCCcccCCCCCHHHHHhhcCcC------ceEEEEECCCCCCCcCcC
Confidence 567788888877777777777777 788888864445789999999988642 346778889999998865
Q ss_pred ---chHHHHHHHHh-CceEEeeccccchhccCccchhhh---cCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHH
Q 038818 249 ---LGPLCDIAKRY-SIWVHVDAAYAGSACICPEFRHFI---DGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKA 320 (486)
Q Consensus 249 ---l~~I~~i~~~~-g~~lhvD~a~g~~~~~~~~~~~~~---~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~ 320 (486)
+++|+++|+++ |+++++|.+|+....-.+...... .+...--.+..+++|.++.| .-+|+++..+ .... .
T Consensus 185 ~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~-~~~~-~ 262 (402)
T PRK06107 185 RAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPA-DLIA-A 262 (402)
T ss_pred HHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCH-HHHH-H
Confidence 67778889998 999999999975322111111111 11111123445679999744 4578776543 3322 2
Q ss_pred hcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC
Q 038818 321 LSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP 398 (486)
Q Consensus 321 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 398 (486)
+.....+. +.....+..+++.+.+ +...+++..+...+.++.+.+.|++++++++. +
T Consensus 263 ~~~~~~~~--------------------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~-~ 321 (402)
T PRK06107 263 INKLQSQS--------------------SSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGLSCL-V 321 (402)
T ss_pred HHHHHHhc--------------------ccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCCccc-C
Confidence 21111000 0011223333444333 34556677777788888899999888777765 4
Q ss_pred CCeeEEEE-EeecC-CCCCCCCCCccchHHHHHHHHHHH-HhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHH
Q 038818 399 RNFAVVCF-RVLPS-ASGLGDGKANEGANELNRKLLESI-NASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVV 475 (486)
Q Consensus 399 ~~~~~v~f-~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l 475 (486)
|+.+.+.| ++... ...... ... ......+.+.+ .+.|+.+.++..+...+++|+++.. +++++++.++.|
T Consensus 322 p~gg~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~---~~e~l~~~l~~l 394 (402)
T PRK06107 322 PDGAFYLYVNCAGLIGKTTPE---GKV-LETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIAT---SLETLEEACARI 394 (402)
T ss_pred CCcceEEeeeccccccccccc---ccC-CCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC---CHHHHHHHHHHH
Confidence 55555544 33210 000000 000 00122344444 4568765555444445799999963 477999999999
Q ss_pred HHHHHHH
Q 038818 476 QEKLDGI 482 (486)
Q Consensus 476 ~~~~~~l 482 (486)
.+.++++
T Consensus 395 ~~~l~~~ 401 (402)
T PRK06107 395 ERAVAAL 401 (402)
T ss_pred HHHHHhc
Confidence 9888765
No 140
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.83 E-value=3.1e-18 Score=171.98 Aligned_cols=322 Identities=12% Similarity=0.084 Sum_probs=195.0
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHH
Q 038818 106 MSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSAL 185 (486)
Q Consensus 106 ~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 185 (486)
..++...++|++ +++++|.+ ..++++|||+|+..++.+..-. +++.|+++..+|.+.
T Consensus 26 ~~g~~~~~le~~----la~~~g~~---------~~v~~~sgt~al~~~l~al~~~----------~Gd~Viv~~~~~~~~ 82 (380)
T TIGR03588 26 TQGPTVPAFEEA----LAEYVGAK---------YAVAFNSATSALHIACLALGVG----------PGDRVWTTPITFVAT 82 (380)
T ss_pred cCChhHHHHHHH----HHHHHCCC---------eEEEEcCHHHHHHHHHHHcCCC----------CCCEEEeCCcchHHH
Confidence 345555556554 66667764 2466778899987777654211 567899999999999
Q ss_pred HHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEe
Q 038818 186 QKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHV 265 (486)
Q Consensus 186 ~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhv 265 (486)
..++...|+ +++.++++++ ++.+|+++|++++++.. ...+.+|+.++ .+|...|+++|.++|++||+++++
T Consensus 83 ~~~~~~~G~---~~~~~~~~~~-~~~~d~~~l~~~i~~~~--~~~t~~v~~~~---~~G~~~~~~~i~~l~~~~~~~lI~ 153 (380)
T TIGR03588 83 ANCALYCGA---KVDFVDIDPD-TGNIDEDALEKKLAAAK--GKLPKAIVPVD---FAGKSVDMQAIAALAKKHGLKIIE 153 (380)
T ss_pred HHHHHHcCC---EEEEEecCCC-cCCcCHHHHHHHhhccc--CCCceEEEEeC---CCCccCCHHHHHHHHHHcCCEEEE
Confidence 999999999 9999999753 57899999999997320 01133555543 579999999999999999999999
Q ss_pred eccccchhccCccchhhhcCCCCCCceeeccc--cccCCCCcceEEEeeCchHHHHHhcCCc-ccccCccCC---CCCcc
Q 038818 266 DAAYAGSACICPEFRHFIDGIEGADSFSLNAH--KWFFTTLDCCCLWVKNPNALIKALSTNP-EFLRNKASD---SKQVV 339 (486)
Q Consensus 266 D~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~h--K~l~~p~~~g~~~~~~~~~~~~~~~~~~-~y~~~~~~~---~~~~~ 339 (486)
|++|+.+..... +. +......|..++++| |++..+ ..|+++++++....+...... +........ .....
T Consensus 154 D~a~a~g~~~~~--~~-~g~~~~~d~~~~S~~~~K~~~~~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 229 (380)
T TIGR03588 154 DASHALGAEYGG--KP-VGNCRYADATVFSFHPVKIITTA-EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPW 229 (380)
T ss_pred ECCCcccCccCC--Ee-CCCccccceEEEecCCCCccccc-CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcc
Confidence 999976543221 11 111124599999988 899876 456677777655432211000 000000000 00000
Q ss_pred CCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCC-----eeEEEEEeecCCCC
Q 038818 340 DYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRN-----FAVVCFRVLPSASG 414 (486)
Q Consensus 340 ~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-----~~~v~f~~~~~~~~ 414 (486)
.+....+....+...+.....+.. .+.+.++.++..++++++.+.|+++|++++..++. ...+.+.+....
T Consensus 230 ~~~~~~~g~n~~m~~l~aa~g~~q--L~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-- 305 (380)
T TIGR03588 230 YYEQQELGFNYRMTDIQAALGLSQ--LKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEF-- 305 (380)
T ss_pred eeeeeccccccCccHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcC--
Confidence 000000111112222322222222 35678899999999999999999998777554321 122333332210
Q ss_pred CCCCCCccchHHHHHHHHHHHHhcCcEEE---eeee----E----C----------CEeEEEEEecCCCCcHHHHHHHHH
Q 038818 415 LGDGKANEGANELNRKLLESINASGQLYV---SHGM----V----A----------GIYFIRFAVGATLTEDRHVIAAWK 473 (486)
Q Consensus 415 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~---~~~~----~----~----------~~~~lR~~~~~~~tt~~did~~i~ 473 (486)
.....++.+.|.++|+..- .+.. + . ....+++.+ ++..+++||+++++
T Consensus 306 ----------~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~-~~~l~~~dv~~i~~ 374 (380)
T TIGR03588 306 ----------GCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPL-HPALTLEQQQRVVE 374 (380)
T ss_pred ----------CCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCC-CCCCCHHHHHHHHH
Confidence 0113456666777776321 1100 0 0 014567665 67889999999999
Q ss_pred HHHHH
Q 038818 474 VVQEK 478 (486)
Q Consensus 474 ~l~~~ 478 (486)
.|+++
T Consensus 375 ~l~~~ 379 (380)
T TIGR03588 375 TLRKV 379 (380)
T ss_pred HHHHh
Confidence 99876
No 141
>PRK07550 hypothetical protein; Provisional
Probab=99.83 E-value=9.2e-18 Score=169.03 Aligned_cols=329 Identities=12% Similarity=0.040 Sum_probs=206.9
Q ss_pred HHHHHHHHHhhc-CCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHc
Q 038818 87 AGFLGEMLSSGF-NVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEI 165 (486)
Q Consensus 87 ~~~~~~~l~~~~-n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~ 165 (486)
+..+.+.+...+ +.....|...++..++++.+.+++.+..|.... ....++|+|+++++..++.+...
T Consensus 44 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-----~~~i~~t~G~~~al~~~~~~l~~------ 112 (386)
T PRK07550 44 PPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAIS-----PEQVHITSGCNQAFWAAMVTLAG------ 112 (386)
T ss_pred CHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCC-----cceEEEecCcHHHHHHHHHHhcC------
Confidence 334455554433 222334554556789999999999998886432 12688999999888766655432
Q ss_pred cccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 166 GRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 166 ~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
+++.|+++..++......++..|+ +++.++.+++..+.+|+++|++++++.+ .+|+++.++|++|.
T Consensus 113 -----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~~~l~~~~~~~~------~~v~~~~P~NPtG~ 178 (386)
T PRK07550 113 -----AGDEVILPLPWYFNHKMWLDMLGI---RPVYLPCDEGPGLLPDPAAAEALITPRT------RAIALVTPNNPTGV 178 (386)
T ss_pred -----CCCEEEEcCCCCcchHHHHHhcCC---EEEEEecCCCcCCCCCHHHHHHHhcccC------cEEEEeCCCCCCCc
Confidence 677788898888888888899999 9999999754457789999999997543 35677789999998
Q ss_pred cCC---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCC-CC-CceeeccccccC-CCCcceEEEeeCchHHHH
Q 038818 246 VDP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIE-GA-DSFSLNAHKWFF-TTLDCCCLWVKNPNALIK 319 (486)
Q Consensus 246 idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~-~a-Dsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~ 319 (486)
+-| +++|+++|++||+++++|++|+.+..........+.... .. ..+..+++|.++ ....+|+++..++ .+.+
T Consensus 179 ~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~-~~~~ 257 (386)
T PRK07550 179 VYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPA-RIAE 257 (386)
T ss_pred ccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCHH-HHHH
Confidence 865 789999999999999999999764221111111111111 11 234678999987 4456888877543 3222
Q ss_pred HhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhc--hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEec
Q 038818 320 ALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFG--VANLRNFLRSHVRMAQLFQELVGGDNRFEIVA 397 (486)
Q Consensus 320 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 397 (486)
... +.... +. ....+..++..+.+. .+..++..++..+.++.+.+.|++++++.+.
T Consensus 258 ~~~----~~~~~-------------~~----~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~- 315 (386)
T PRK07550 258 IEK----FMDTV-------------AI----CAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGWELL- 315 (386)
T ss_pred HHH----HHhhc-------------cc----CCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCceeC-
Confidence 111 11000 00 012222333333322 3445566677778888999999887666543
Q ss_pred CCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHH
Q 038818 398 PRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKV 474 (486)
Q Consensus 398 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~ 474 (486)
++....+.+++.... ....++.+++. +.|+.+..+..+. +..++|+++.. .++++++++++.
T Consensus 316 ~~g~~~~~~~~~~~~-------------~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~--~~~~~~~~~~~~ 380 (386)
T PRK07550 316 ASGAYFAYVRHPFPD-------------RPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFAN--ADVAGIGELVER 380 (386)
T ss_pred CCceEEEEecCCCCC-------------CCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeec--CCHHHHHHHHHH
Confidence 333333444443211 01245666654 4677544433332 35689999953 457799999999
Q ss_pred HHHH
Q 038818 475 VQEK 478 (486)
Q Consensus 475 l~~~ 478 (486)
|.+.
T Consensus 381 l~~~ 384 (386)
T PRK07550 381 LRAF 384 (386)
T ss_pred HHhh
Confidence 8775
No 142
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.83 E-value=8.3e-18 Score=170.20 Aligned_cols=340 Identities=11% Similarity=0.038 Sum_probs=208.4
Q ss_pred HHHHHHHHHhhcCCC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHc
Q 038818 87 AGFLGEMLSSGFNVV-GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEI 165 (486)
Q Consensus 87 ~~~~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~ 165 (486)
+..+.+.+...+... ...|...+...++.+.+.+++.+. |.+.. ....++|+|+++++..++.+...
T Consensus 50 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~-~~~~~-----~~~i~~t~G~~~al~~~~~~l~~------ 117 (401)
T TIGR01264 50 DPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNP-DGPIE-----ADDVVLCSGCSHAIEMCIAALAN------ 117 (401)
T ss_pred CHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhc-CCCCC-----HHHEEECcChHHHHHHHHHHhCC------
Confidence 344455555544432 234555556677777777777653 32211 12688999999998777665533
Q ss_pred cccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 166 GRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 166 ~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
+++.|+++..++..+...++..|+ +++.++++.++++.+|++.|++++++.+ .+|+++.++|+||.
T Consensus 118 -----~gd~v~i~~P~y~~~~~~~~~~g~---~v~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~~~~p~NPtG~ 183 (401)
T TIGR01264 118 -----AGQNILVPRPGFPLYETLAESMGI---EVKLYNLLPDKSWEIDLKQLESLIDEKT------AALIVNNPSNPCGS 183 (401)
T ss_pred -----CCCEEEEeCCCChhHHHHHHHcCC---EEEEeecCCccCCCCCHHHHHHHhccCc------eEEEEcCCCCCCCC
Confidence 556777888888888889999999 9999998754467999999998876432 36788889999999
Q ss_pred cC---CchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCC-ceeeccccccC-CCCcceEEEeeCch-HHHH
Q 038818 246 VD---PLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGAD-SFSLNAHKWFF-TTLDCCCLWVKNPN-ALIK 319 (486)
Q Consensus 246 id---pl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aD-si~~~~hK~l~-~p~~~g~~~~~~~~-~~~~ 319 (486)
+- ++++|+++|+++|+++++|++|..+............-..... .++.++.|.++ ...-+|+++..++. .+.+
T Consensus 184 ~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~ 263 (401)
T TIGR01264 184 VFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRD 263 (401)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHH
Confidence 85 4889999999999999999999765432111111111111112 45667899744 55568988876421 1111
Q ss_pred HhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe
Q 038818 320 ALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF---GVANLRNFLRSHVRMAQLFQELVGGDNRFEIV 396 (486)
Q Consensus 320 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 396 (486)
....... +.... + ....+...++...+ ..+.+++..+...+..+++.+.|++++++.+.
T Consensus 264 ~~~~~~~-~~~~~-----------~------~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~ 325 (401)
T TIGR01264 264 IRDGLVK-LSQRI-----------L------GPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPV 325 (401)
T ss_pred HHHHHHH-Hhhcc-----------C------CCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCccc
Confidence 1100000 00000 0 00112222222222 24567777788888889999999988777654
Q ss_pred cCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHH
Q 038818 397 APRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVV 475 (486)
Q Consensus 397 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l 475 (486)
.+.....+.+.+.....+ + .. + ..++.+.+. +.|+.+..+..+...+++|++++. .++++++.++.|
T Consensus 326 ~p~~g~f~~~~~~~~~~~--~---~~--~--~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~---~~~~l~~~l~rl 393 (401)
T TIGR01264 326 MPSGAMYMMVGIEMEHFP--E---FK--N--DVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTV---PVVMMEEACSRI 393 (401)
T ss_pred CCCeeeEEEEEecccccC--C---CC--C--HHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcC---CHHHHHHHHHHH
Confidence 344434444454321000 0 00 1 234566654 568765544444446799999953 467999999999
Q ss_pred HHHHHHH
Q 038818 476 QEKLDGI 482 (486)
Q Consensus 476 ~~~~~~l 482 (486)
.+.++++
T Consensus 394 ~~~~~~~ 400 (401)
T TIGR01264 394 QEFCERH 400 (401)
T ss_pred HHHHhcc
Confidence 8887653
No 143
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.83 E-value=5.5e-18 Score=168.31 Aligned_cols=322 Identities=12% Similarity=0.032 Sum_probs=202.2
Q ss_pred HHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCc-ceEEcCCchHHHHHHHHHHHHHHHHHcccc
Q 038818 90 LGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTG-GGVIQGTTCEAILCTLAAARDQILNEIGRE 168 (486)
Q Consensus 90 ~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~-~~~~t~ggt~a~~~al~~a~~~~~~~~~~~ 168 (486)
+.+.+..... ....|....+...+.+.+.+|+.+..|.+.+. . .+++|+|+++++..++.+..+.
T Consensus 18 ~~~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-----~~~Iiit~Gs~~ai~~~~~~~~~~-------- 83 (350)
T TIGR03537 18 IRKALIDAVP-EVSQYPSALGTKALREAISGWFERRFGVKLDP-----DAQVLPSAGSKEAIFHFPLVFIDP-------- 83 (350)
T ss_pred HHHHHHHHHh-ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CCcEEEcCChHHHHHHHHHHHcCC--------
Confidence 3444443332 23346544456789999999999888865331 2 6899999999887665544321
Q ss_pred CCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC
Q 038818 169 NISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP 248 (486)
Q Consensus 169 ~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp 248 (486)
|.+++.|+++..++.....+++.+|+ +++.+|+++.+.+.+|++++++++.+.+ .+++++.++|+||.+-|
T Consensus 84 g~~~d~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------~~i~i~~p~NPtG~~~~ 154 (350)
T TIGR03537 84 EEDRRRVIFGTPGYPVYERGALFAGG---EPTAVKLKKEDGFLLRLEKVEKSILEET------KIVWINYPHNPTGATAP 154 (350)
T ss_pred CCCCceEEEcCCCCcchHHHHHhcCC---EEEEcccCcccCCccCHHHHHHhhhhcc------EEEEEeCCCCCcCcccC
Confidence 11235788899999999999999999 9999999743456799999999987643 46778889999999877
Q ss_pred ---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCC-CCceeeccccccCCC-CcceEEEeeCchHHHHHhcC
Q 038818 249 ---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEG-ADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALST 323 (486)
Q Consensus 249 ---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~-aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~ 323 (486)
+++|+++|++||+++++|++|+...... ...... .... -..+..+++|.++.| .-.|+++. ++.........
T Consensus 155 ~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~-~~~~~~~i~~~s~SK~~g~~GlRiG~~~~-~~~~~~~~~~~ 231 (350)
T TIGR03537 155 RSYLKETIAMCREHGIILCSDECYTEIYFGE-PPHSAL-EVGIENVLAFHSLSKRSGMTGYRSGFVAG-DEKLISFLRKL 231 (350)
T ss_pred HHHHHHHHHHHHHcCcEEEEeccccccccCC-CCCchh-hcCcCCEEEEeecccccCCccccceeeec-CHHHHHHHHHH
Confidence 8899999999999999999997543211 111111 1111 124455789998654 34676653 44333222111
Q ss_pred CcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCee
Q 038818 324 NPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF-GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFA 402 (486)
Q Consensus 324 ~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~ 402 (486)
...+. .+ ...+...++...+ ..+.+++..++..++.+.+.+.|++. ++++. +|..+
T Consensus 232 ~~~~~-------------------~~--~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~-g~~~~-~~~g~ 288 (350)
T TIGR03537 232 RANFG-------------------VA--SPDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKV-GLEYL-YPDAT 288 (350)
T ss_pred HHhhc-------------------cC--CCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CCCeE
Confidence 11110 00 0111112222222 23455666777778888888999886 77755 45545
Q ss_pred EEE-EEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 038818 403 VVC-FRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQE 477 (486)
Q Consensus 403 ~v~-f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~~ 477 (486)
.+. +.+.+. ....++.+.|.++|+.+..+..+. +..++|+++. .++++++++++.|++
T Consensus 289 ~~~~~~~~~~--------------~~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~~---~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 289 FYLWVKVPSG--------------IDAKDYALRLLENGIVVAPGENFGSGEEGYVRVALV---PTLEECEEALRLWER 349 (350)
T ss_pred EEEEEECCCC--------------CCHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEec---CCHHHHHHHHHHHhc
Confidence 433 344321 012456777777887554444332 2578999984 356788888887764
No 144
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.83 E-value=9.3e-18 Score=168.85 Aligned_cols=325 Identities=13% Similarity=0.087 Sum_probs=201.9
Q ss_pred HHHHHHHHhhcC-CCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcc
Q 038818 88 GFLGEMLSSGFN-VVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIG 166 (486)
Q Consensus 88 ~~~~~~l~~~~n-~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 166 (486)
..+.+.+...+. .....|....+..++.+.+.+|+++.+|.+... ....++|+|+++++..++.+...
T Consensus 45 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~----~~~vi~t~G~~~~l~~~~~~~~~------- 113 (383)
T TIGR03540 45 KHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDP----ETEVLSLIGSKEGIAHIPLAFVN------- 113 (383)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCC----CCeEEECCCcHHHHHHHHHHhCC-------
Confidence 334444444332 223445544456788899999999888874321 01467888988888766655432
Q ss_pred ccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 167 RENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 167 ~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
+++.|+++..++.....+++.+|. +++.+|+++++.+.+|+++|++++.+. +.+|+++.++||||.+
T Consensus 114 ----~gd~vlv~~P~y~~~~~~~~~~G~---~v~~v~~~~~~g~~~d~~~l~~~~~~~------~~~v~i~~P~NPtG~~ 180 (383)
T TIGR03540 114 ----PGDIVLVPDPGYPVYRIGTLFAGG---EPYEMPLKEENGFLPDFDAIPEDIAKK------AKLMFINYPNNPTGAV 180 (383)
T ss_pred ----CCCEEEEeCCCCcchHHHHHhcCC---EEEEEecCcccCCccCHHHHHhhcccc------ceEEEEeCCCCCcCcc
Confidence 677888899999888889999999 999999975434678999999888643 3477778899999999
Q ss_pred CC---chHHHHHHHHhCceEEeeccccchhccCccchhh--hcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHH
Q 038818 247 DP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHF--IDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKA 320 (486)
Q Consensus 247 dp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~ 320 (486)
-+ +++|+++|++||+++++|.+|+............ +.+...-..+..++.|.++.| .-+|+++.. ++.....
T Consensus 181 ~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~-~~l~~~~ 259 (383)
T TIGR03540 181 APLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGN-ADLIAGL 259 (383)
T ss_pred CCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCC-HHHHHHH
Confidence 77 7899999999999999999997543211111111 111111224456788998644 347877653 4333322
Q ss_pred hcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC
Q 038818 321 LSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP 398 (486)
Q Consensus 321 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 398 (486)
..... +... ....+...++...+ +.+.+++..+...++++.+.+.|++. ++++..
T Consensus 260 ~~~~~-~~~~--------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~- 316 (383)
T TIGR03540 260 GKVKT-NVDS--------------------GVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKI-GIDVEK- 316 (383)
T ss_pred HHHHH-hccc--------------------CCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEecC-
Confidence 11110 0000 00111122222222 34566777778888899999999987 787764
Q ss_pred CCeeE-EEEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHH
Q 038818 399 RNFAV-VCFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKV 474 (486)
Q Consensus 399 ~~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~ 474 (486)
+..+. +.+.+.+.. ...++.+.+. +.|+.+..+..+. +.+++|+++.. +++++++.++.
T Consensus 317 ~~~~~~~~~~l~~~~--------------~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~---~~~~l~~~l~~ 379 (383)
T TIGR03540 317 PKATFYVWVPVPEGY--------------TSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTV---PDERLEEAVAR 379 (383)
T ss_pred CCcceEEEEECCCCC--------------CHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecC---CHHHHHHHHHH
Confidence 44444 344443210 1235666654 4577544433332 24689999952 45577777766
Q ss_pred HHH
Q 038818 475 VQE 477 (486)
Q Consensus 475 l~~ 477 (486)
|.+
T Consensus 380 l~~ 382 (383)
T TIGR03540 380 IKK 382 (383)
T ss_pred Hhh
Confidence 643
No 145
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.83 E-value=5.3e-18 Score=161.47 Aligned_cols=360 Identities=15% Similarity=0.081 Sum_probs=240.3
Q ss_pred CCCCHHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHH-------HHHHhhcCCCccccccChhhHHHHHHHHHH
Q 038818 49 NPEPIETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLG-------EMLSSGFNVVGFNWMSSPAATELENIVMDW 121 (486)
Q Consensus 49 ~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-------~~l~~~~n~~~~~~~~~~~~~~le~~~~~~ 121 (486)
.+.++.+++++|++...+|. ..+.|.|.-.-+...|+++. +|+++ |.+++..-+++.....+|.+ .+
T Consensus 55 ~~~sE~e~l~~l~~ia~kN~---~~~sfiG~GyY~~~~P~vI~rnile~pewyTa-YTPYQpEISQGrLqaLfefQ--tl 128 (450)
T COG0403 55 KPLSEYEALAELKEIASKNK---VFTSFIGAGYYDTYTPPVILRNILENPEWYTA-YTPYQPEISQGRLEALFEFQ--TL 128 (450)
T ss_pred CCCCHHHHHHHHHHHHhcCc---hhhhhccCcccCCcCcHHHHHHhhcCcccccc-CCCCchhhhhHHHHHHHHHH--HH
Confidence 45699999999999877775 45678774433444555554 34453 44555555677777788877 89
Q ss_pred HHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH----cCCCCC
Q 038818 122 LGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI----AGIDPK 197 (486)
Q Consensus 122 l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~----~G~g~~ 197 (486)
+++|.|++.. +..+..++|.+- .|+.+++... +.++..++++...|+......+. +|+
T Consensus 129 v~dLTGm~VA-------NASm~DeaTAaA-EAm~ma~r~~-------k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~--- 190 (450)
T COG0403 129 VADLTGLDVA-------NASMLDEATAAA-EAMLMAKRVT-------KKKRNKFLVPKDVHPQTLDVLRTRAEGLGI--- 190 (450)
T ss_pred HHHHhCCCcc-------cchhhhhHHHHH-HHHHHHHHhh-------cCcCceEEecCCCCHHHHHHHHhhcccCce---
Confidence 9999999986 678899988655 4444443321 11357899999999986555543 345
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc-ccCCchHHHHHHHHhCceEEeeccccchhccC
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT-TVDPLGPLCDIAKRYSIWVHVDAAYAGSACIC 276 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G-~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~ 276 (486)
+++.++.+ |.++|+++ ++. ..+.|++..+++ .| .+.++.+|.+.+|++|..++|=+---+..++.
T Consensus 191 ~i~~~~~~-------d~~~l~~~-~~~-----~~~gv~vQyP~~-~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~ 256 (450)
T COG0403 191 EIEVVDAD-------DLDDLESA-DDG-----DVFGVLVQYPNT-FGIVEEDLRALIEAAHSAGALVIVAADPLALGLLK 256 (450)
T ss_pred EEEEeccc-------hhhhhhhc-ccc-----CeEEEEEecCCC-CCccchhHHHHHHHHhhcCCEEEEEechhHhhccC
Confidence 66666543 77888877 321 135677887775 56 67789999999999999887754332333333
Q ss_pred ccchhhhcCCCCCCceeeccccccC----CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCcccc----C
Q 038818 277 PEFRHFIDGIEGADSFSLNAHKWFF----TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQIT----L 348 (486)
Q Consensus 277 ~~~~~~~~~~~~aDsi~~~~hK~l~----~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~----~ 348 (486)
|... -+||.++.+++.++. +.+-+|+|.++++- .+..|+.+.+...+..+...+. .++| -
T Consensus 257 pPGe------~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~-----~R~mPGRlVG~S~D~~G~~A~r-LaLQTREQH 324 (450)
T COG0403 257 PPGE------FGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEF-----KRQMPGRLVGVSVDAAGKRAFR-LALQTREQH 324 (450)
T ss_pred Cccc------cCCceEEecCcccCCCcCCCCcceeeeeEhHhH-----hhcCCCceeeeeecCCCCchhh-hhHHHHHHH
Confidence 3322 289999999988653 22348889888763 3556777766544434433332 2222 1
Q ss_pred CCCCC------------chHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEecCCCeeEEEEEeecCCCCC
Q 038818 349 SRRFR------------ALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDN-RFEIVAPRNFAVVCFRVLPSASGL 415 (486)
Q Consensus 349 sr~~~------------~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~~~~v~f~~~~~~~~~ 415 (486)
-||.. ++...+++.++|.+|++++.++.++++.+|+++|++.. +++++.+..+..+++++..
T Consensus 325 IRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~fFdt~~v~~~~----- 399 (450)
T COG0403 325 IRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFDHFFDTFTVRVPE----- 399 (450)
T ss_pred HhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccccceeeEEEecch-----
Confidence 23322 23334455668999999999999999999999999653 6898877777888888752
Q ss_pred CCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 416 GDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 416 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
+.+..+.++....|+- +. .+... .+-+++. ..+|++||+.+++++...
T Consensus 400 ----------~~~~~l~~~~~~~G~~-L~--~~~~~-~~~ia~t-Et~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 400 ----------EVAEALLAAAIAGGIN-LR--RVDAD-TVLIALT-ETTTKEDIDALVAAFGGV 447 (450)
T ss_pred ----------hHHHHHHHHHHhcCCc-ee--eecCC-ceEEEee-cccCHHHHHHHHHHHhhh
Confidence 3355666666666652 11 11111 4557774 578889999999998764
No 146
>PRK07337 aminotransferase; Validated
Probab=99.82 E-value=1.1e-17 Score=168.73 Aligned_cols=327 Identities=14% Similarity=0.070 Sum_probs=206.0
Q ss_pred HHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcccc
Q 038818 89 FLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRE 168 (486)
Q Consensus 89 ~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~ 168 (486)
.+.+.+...+......|.......++++.+.+|+.+.+|.+.+ ..+.++|+|+++|+..++.+...
T Consensus 47 ~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-----~~~i~~t~G~~~al~~~~~~l~~--------- 112 (388)
T PRK07337 47 PVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVA-----PERIVVTAGASAALLLACLALVE--------- 112 (388)
T ss_pred HHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-----hHhEEEecCcHHHHHHHHHHhcC---------
Confidence 3455555555444445665556788999999999988886422 12688999999988766655432
Q ss_pred CCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC
Q 038818 169 NISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP 248 (486)
Q Consensus 169 ~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp 248 (486)
+++.|+++..+|.+....++..|. +++.+|+++++++.+|+++|++.+.+.+ .+|+++.++|+||.+-+
T Consensus 113 --~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~ 181 (388)
T PRK07337 113 --RGDEVLMPDPSYPCNRHFVAAAEG---RPVLVPSGPAERFQLTAADVEAAWGERT------RGVLLASPSNPTGTSIA 181 (388)
T ss_pred --CCCEEEEeCCCchhhHHHHHHcCC---EEEEeecCCccCCcCCHHHHHhhcCccc------eEEEEECCCCCCCcCcC
Confidence 567888999999999888899998 9999999764567999999999886533 36777889999999755
Q ss_pred ---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCce-eeccccccCCC-CcceEEEeeCchHHHHHhcC
Q 038818 249 ---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSF-SLNAHKWFFTT-LDCCCLWVKNPNALIKALST 323 (486)
Q Consensus 249 ---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi-~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~ 323 (486)
+++|+++|+++|+++++|.+|..... .+...... .+ ..+.+ ..+++|.++.| .-+|+++..++ ... .+..
T Consensus 182 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~-~~~~~~~~-~~-~~~vi~~~S~SK~~~~~G~RiG~~~~~~~-l~~-~l~~ 256 (388)
T PRK07337 182 PDELRRIVEAVRARGGFTIVDEIYQGLSY-DAAPVSAL-SL-GDDVITINSFSKYFNMTGWRLGWLVVPEA-LVG-TFEK 256 (388)
T ss_pred HHHHHHHHHHHHHCCCEEEEecccccccc-CCCCcChh-hc-cCCEEEEEechhhcCCchhheeeeecCHH-HHH-HHHH
Confidence 78889999999999999999976432 11111111 11 23444 45789999744 45888877543 222 2211
Q ss_pred CcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCC
Q 038818 324 NPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFG---VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRN 400 (486)
Q Consensus 324 ~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~ 400 (486)
...+... ....+..+++...+. .+.+.+..++..+.++++.+.|+++ ++.+...|.
T Consensus 257 ~~~~~~~--------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~~~p~ 315 (388)
T PRK07337 257 LAQNLFI--------------------CASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL-GFKVPVMPD 315 (388)
T ss_pred HHHHhcc--------------------CCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCC
Confidence 1001100 012233333333332 2345666677778888899999886 665433344
Q ss_pred ee-EEEEEeecCCCCCCCCCCccchHHHHHHHHHHH-HhcCcEEEeeeeEC---CEeEEEEEecCCCCcHHHHHHHHHHH
Q 038818 401 FA-VVCFRVLPSASGLGDGKANEGANELNRKLLESI-NASGQLYVSHGMVA---GIYFIRFAVGATLTEDRHVIAAWKVV 475 (486)
Q Consensus 401 ~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~---~~~~lR~~~~~~~tt~~did~~i~~l 475 (486)
.+ .+.+.+..... .. .....++.+.+ .+.|+.+.++..+. +.+++|+++.. .++++++.++.|
T Consensus 316 ~g~f~~~~~~~~~~-------~~--~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~---~~~~l~~~l~rl 383 (388)
T PRK07337 316 GAFYVYADCRGVAH-------PA--AGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT---SMSRLEEAVARL 383 (388)
T ss_pred eeEEEEEecccccC-------CC--CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC---CHHHHHHHHHHH
Confidence 33 44445532100 00 00123455554 45677544433332 25799999963 466888888887
Q ss_pred HHH
Q 038818 476 QEK 478 (486)
Q Consensus 476 ~~~ 478 (486)
.++
T Consensus 384 ~~~ 386 (388)
T PRK07337 384 GKL 386 (388)
T ss_pred HHH
Confidence 764
No 147
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.82 E-value=8.6e-18 Score=169.01 Aligned_cols=326 Identities=11% Similarity=0.113 Sum_probs=206.2
Q ss_pred HHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcc
Q 038818 87 AGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIG 166 (486)
Q Consensus 87 ~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 166 (486)
+.++.+++....+ ....|....+...+.+.+.+|+.+..|++.. ..+.++|+|+++++..++.+...
T Consensus 45 ~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~-----~~~i~it~G~~~al~~~~~~~~~------- 111 (384)
T PRK06348 45 ESIINAAFEDAKK-GHTRYTDSGGDVELIEEIIKYYSKNYDLSFK-----RNEIMATVGACHGMYLALQSILD------- 111 (384)
T ss_pred HHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC-----hhhEEEcCChHHHHHHHHHHhcC-------
Confidence 4444444443322 2345655555678999999999888776433 13789999999988777666543
Q ss_pred ccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 167 RENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 167 ~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
+++.|+++..+|.....++..+|. +++.+|.++++++.+|+++|++++++.+ .+|+++.++||||.+
T Consensus 112 ----~gd~vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~~ 178 (384)
T PRK06348 112 ----PGDEVIIHEPYFTPYKDQIEMVGG---KPIILETYEEDGFQINVKKLEALITSKT------KAIILNSPNNPTGAV 178 (384)
T ss_pred ----CCCEEEEeCCCCcchHHHHHHcCC---EEEEecCCcCcCCcCCHHHHHHhhCcCc------cEEEEeCCCCCCCcC
Confidence 567788899999999999999998 8999987543457899999999886432 356677899999998
Q ss_pred CC---chHHHHHHHHhCceEEeeccccchhccCccchhh--hcCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHH
Q 038818 247 DP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHF--IDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKA 320 (486)
Q Consensus 247 dp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~ 320 (486)
-+ +++|.++|++||+++++|.+|+.+.... ..... +.+...-..+..++.|.++ ...-+|+++..++ ... .
T Consensus 179 ~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~-~~~-~ 255 (384)
T PRK06348 179 FSKETLEEIAKIAIEYDLFIISDEVYDGFSFYE-DFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDY-IIE-T 255 (384)
T ss_pred CCHHHHHHHHHHHHHCCeEEEEecccccceeCC-CccchhhcCCCcCcEEEEecchhccCCccccceeeecCHH-HHH-H
Confidence 54 7888999999999999999997654321 11111 1111122245567899998 5566888777533 222 2
Q ss_pred hcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC
Q 038818 321 LSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP 398 (486)
Q Consensus 321 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 398 (486)
+.....+.. . ....+...++...+ ..+.++++.+...+.++++.+.|++++++++. +
T Consensus 256 ~~~~~~~~~------------------~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~-~ 314 (384)
T PRK06348 256 AKIINEGIC------------------F--SAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLH-P 314 (384)
T ss_pred HHHHHHhcc------------------C--CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceec-c
Confidence 211000000 0 01122222222222 23345566666777788899999888777654 5
Q ss_pred CCeeEEEE-EeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHH
Q 038818 399 RNFAVVCF-RVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKV 474 (486)
Q Consensus 399 ~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~ 474 (486)
|..+.+.| ++..... + ..++.+.+. +.|+.+..+..+. +..++|+++. .+++++++.++.
T Consensus 315 p~gg~~~~~~~~~~~~-----------~--~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~al~~ 378 (384)
T PRK06348 315 PKGSIYAFINIKKTGL-----------S--SVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACT---VGIEVLEEAFNR 378 (384)
T ss_pred CCeeEEEEEecccCCC-----------C--HHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEec---CCHHHHHHHHHH
Confidence 55565544 4432110 1 234565554 4577555444332 3579999984 366788888888
Q ss_pred HHHH
Q 038818 475 VQEK 478 (486)
Q Consensus 475 l~~~ 478 (486)
|.++
T Consensus 379 l~~~ 382 (384)
T PRK06348 379 IEKM 382 (384)
T ss_pred HHhh
Confidence 7654
No 148
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.82 E-value=1.1e-17 Score=166.57 Aligned_cols=290 Identities=13% Similarity=0.081 Sum_probs=187.9
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCC
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGID 195 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g 195 (486)
.++++.+++.+|.+++ +.++|+|+++++..++.+. . ++.+++ ....+..+...++..|+
T Consensus 58 ~~lr~~ia~~~~~~~~-------~i~it~Ga~~~l~~~~~~l-~-----------~g~viv-~~P~y~~~~~~~~~~g~- 116 (356)
T PRK08056 58 RHLHQALARHHQVPAS-------WILAGNGETESIFAVVSGL-K-----------PRRAMI-VTPGFAEYRRALQQVGC- 116 (356)
T ss_pred HHHHHHHHHHhCcChh-------hEEECCCHHHHHHHHHHHh-C-----------CCCEEE-eCCCcHHHHHHHHHcCC-
Confidence 4566778888888765 7889999888876555432 1 333444 44667677788899999
Q ss_pred CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHHHhCceEEeeccccch
Q 038818 196 PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAKRYSIWVHVDAAYAGS 272 (486)
Q Consensus 196 ~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~~~g~~lhvD~a~g~~ 272 (486)
+++.+|.++++.+.+| +++++.+.+. +.+|+++.++||||.+-+ +++|+++|+++++++++|++|..+
T Consensus 117 --~~~~v~~~~~~~~~~~-~~~~~~~~~~------~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~ 187 (356)
T PRK08056 117 --EIRRYSLREADGWQLT-DAILEALTPD------LDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDF 187 (356)
T ss_pred --eEEEEecccccCCCcc-HHHHHhccCC------CCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhcc
Confidence 9999998754445666 3444545322 346778999999999988 888999999999999999999664
Q ss_pred hccCccchhhhcCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC
Q 038818 273 ACICPEFRHFIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR 351 (486)
Q Consensus 273 ~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~ 351 (486)
..........+... .-..+..+++|+++ ...-+|+++..++............+ .
T Consensus 188 ~~~~~~~~~~~~~~-~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~~~~-----------------------~ 243 (356)
T PRK08056 188 IPDETGFIPQLADN-PHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQMPW-----------------------S 243 (356)
T ss_pred CCcchHHHHHhccC-CCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCCC-----------------------c
Confidence 32111111112222 24467789999999 55678988876554433221111000 0
Q ss_pred CCchHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHH
Q 038818 352 FRALKLWLVLRSF-GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRK 430 (486)
Q Consensus 352 ~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 430 (486)
...+...++...+ +.+..++..+...+.++++.+.|++++++.+. ++..+.+.+++... ...
T Consensus 244 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~----------------~~~ 306 (356)
T PRK08056 244 INAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLTVW-PGRANYLFLRCERP----------------DID 306 (356)
T ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc-CCCCcEEEEEcCCC----------------hHH
Confidence 1123333333333 33445666777788899999999988888765 45555544444321 135
Q ss_pred HHHHHHhcCcEEEeeeeECC--EeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 431 LLESINASGQLYVSHGMVAG--IYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 431 l~~~l~~~g~~~~~~~~~~~--~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
+.+.|.+.|+.+..+..+.+ .+++|+++. ++++.++++++|+++.+
T Consensus 307 ~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 307 LQRALLTQRILIRSCANYPGLDSRYYRVAIR----SAAENERLLAALRNVLT 354 (356)
T ss_pred HHHHHHHCCeEEEECCCCCCCCCCEEEEEEc----CHHHHHHHHHHHHHHHc
Confidence 66677777875544443322 468999984 45688999999987643
No 149
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.82 E-value=1.2e-17 Score=171.35 Aligned_cols=327 Identities=11% Similarity=0.102 Sum_probs=209.5
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH
Q 038818 105 WMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA 184 (486)
Q Consensus 105 ~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s 184 (486)
|....+...+.+.+.+|+.+.+|.+... ....+++|+|+++++...+.+..+ +++.|+++...+..
T Consensus 82 Y~~~~G~~~LR~aiA~~l~~~~~~~~~v---~~~~Iiit~Ga~~al~~l~~~l~~-----------pGd~Vlv~~P~Y~~ 147 (468)
T PLN02450 82 FQDYHGLPAFKNALAEFMSEIRGNKVTF---DPNKLVLTAGATSANETLMFCLAE-----------PGDAFLLPTPYYPG 147 (468)
T ss_pred CCCCCChHHHHHHHHHHHHHhhCCCCCc---ChHHeEEccChHHHHHHHHHHhCC-----------CCCEEEECCCCCCc
Confidence 4433445678889999998887743110 012689999999987766665543 67788899898888
Q ss_pred HHHHHH-HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHHHhC
Q 038818 185 LQKAAQ-IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAKRYS 260 (486)
Q Consensus 185 ~~~a~~-~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~~~g 260 (486)
+...+. ..|+ +++.||+++++.+.+|+++|++++++..+++..+.+|+++.++||||.+-+ +++|.++|++||
T Consensus 148 ~~~~~~~~~g~---~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~ 224 (468)
T PLN02450 148 FDRDLKWRTGV---EIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKN 224 (468)
T ss_pred hHHHHhhcCCc---EEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCC
Confidence 878777 5788 999999875456789999999999876555656777888899999999855 667888899999
Q ss_pred ceEEeeccccchhccCccchhhhcCC--------CCC--CceeeccccccC-CCCcceEEEeeCchHHHHHhcCCccccc
Q 038818 261 IWVHVDAAYAGSACICPEFRHFIDGI--------EGA--DSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLR 329 (486)
Q Consensus 261 ~~lhvD~a~g~~~~~~~~~~~~~~~~--------~~a--Dsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~ 329 (486)
+|+++|.+|+......+.+...+.-+ ... -.+..+..|.++ ...-+|+++..++.... .+.....+.
T Consensus 225 ~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~-~~~~~~~~~- 302 (468)
T PLN02450 225 IHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVS-AATKMSSFG- 302 (468)
T ss_pred cEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHH-HHHHHhhcC-
Confidence 99999999976433221121111100 011 145677899987 66679988876554332 221111110
Q ss_pred CccCCCCCccCCCCccccCCCCCCchHHHHHHHHhch-----HHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEE
Q 038818 330 NKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGV-----ANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVV 404 (486)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~-----~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v 404 (486)
....+...++...+.. ..+++..++..+..+.+.+.|+++ ++++. ++..+.+
T Consensus 303 ---------------------~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~-~~~~g~f 359 (468)
T PLN02450 303 ---------------------LVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIKCL-KSNAGLF 359 (468)
T ss_pred ---------------------CCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccc-CCCceEE
Confidence 0112223333333322 235666777778888899999887 77654 4555644
Q ss_pred EE-EeecCCCCCCCCCCccchHHHHHHHHHHHHh-cCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 405 CF-RVLPSASGLGDGKANEGANELNRKLLESINA-SGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 405 ~f-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
.| ++.... . ... -+...++.+++.+ .|+.+.++..+. +.+++|++++. .++++++..++.|+++++
T Consensus 360 lwi~l~~~~-~------~~~-~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~--~~~~~l~~~l~ri~~~l~ 429 (468)
T PLN02450 360 CWVDMRHLL-K------SNT-FEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFAN--MSEETLDLAMKRLKSFVE 429 (468)
T ss_pred EEEEchHhc-C------cCC-chHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecC--CCHHHHHHHHHHHHHHHH
Confidence 44 443210 0 000 1112345566654 577544443332 35799999964 356799999999998876
Q ss_pred HHh
Q 038818 481 GIL 483 (486)
Q Consensus 481 ~l~ 483 (486)
+..
T Consensus 430 ~~~ 432 (468)
T PLN02450 430 SDS 432 (468)
T ss_pred hcc
Confidence 543
No 150
>PRK09265 aminotransferase AlaT; Validated
Probab=99.82 E-value=1.1e-17 Score=169.53 Aligned_cols=318 Identities=11% Similarity=0.048 Sum_probs=196.1
Q ss_pred cccccChhhHHHHHHHHHHHHHHc--CCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCC
Q 038818 103 FNWMSSPAATELENIVMDWLGEML--KLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQ 180 (486)
Q Consensus 103 ~~~~~~~~~~~le~~~~~~l~~l~--g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~ 180 (486)
..|....+...+.+.+.+++.... +++++ ..++|+|+++++..++.+... +++.|+++..
T Consensus 66 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~-------~i~~t~G~~~~l~~~~~~~~~-----------~gd~Vlv~~p 127 (404)
T PRK09265 66 QGYSDSKGLFSARKAIMQYYQQKGIPDVDVD-------DIYIGNGVSELIVMAMQALLN-----------NGDEVLVPAP 127 (404)
T ss_pred CCCCCCCCcHHHHHHHHHHHhccCCCCCCcc-------cEEEeCChHHHHHHHHHHhCC-----------CCCEEEEeCC
Confidence 345544445677777777775432 34443 688999998888766655432 5667888999
Q ss_pred CchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHH
Q 038818 181 THSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAK 257 (486)
Q Consensus 181 ~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~ 257 (486)
+|..+..+++..|. +++.++++.++++.+|+++|++++++. +.+|+++.++|+||.+-+ +++|+++|+
T Consensus 128 ~y~~~~~~~~~~g~---~~v~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~ 198 (404)
T PRK09265 128 DYPLWTAAVSLSGG---KPVHYLCDEEAGWFPDLDDIRSKITPR------TKAIVIINPNNPTGAVYSKELLEEIVEIAR 198 (404)
T ss_pred CCcChHHHHHHcCC---EEEEEecccccCCCCCHHHHHHhcccc------ceEEEEECCCCCCCcCCCHHHHHHHHHHHH
Confidence 99999999999998 888888875445789999999988643 336888899999999988 899999999
Q ss_pred HhCceEEeeccccchhccCccchhhhcCCCCCCcee-eccccccCCC-CcceEEEee-CchH---HHHHhcCCcccccCc
Q 038818 258 RYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFS-LNAHKWFFTT-LDCCCLWVK-NPNA---LIKALSTNPEFLRNK 331 (486)
Q Consensus 258 ~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~-~~~hK~l~~p-~~~g~~~~~-~~~~---~~~~~~~~~~y~~~~ 331 (486)
++|+++++|.+|+.....................++ .++.|.++.| .-+|+++.. ++.. +.+.+... .+..
T Consensus 199 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~-~~~~-- 275 (404)
T PRK09265 199 QHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDML-ASMR-- 275 (404)
T ss_pred HCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHHHH-hccc--
Confidence 999999999999754321111111111111223444 4468999654 457888864 3321 11111100 0000
Q ss_pred cCCCCCccCCCCccccCCCCCCchHHHHHHHHhch-HHHHHHH---HHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEE-
Q 038818 332 ASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGV-ANLRNFL---RSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCF- 406 (486)
Q Consensus 332 ~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~-~g~~~~~---~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f- 406 (486)
. ....+...++...++. +.+.+++ ++..+.++.+.+.|++++++++. +|..+.+.|
T Consensus 276 --------------~----~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~-~p~~g~~l~~ 336 (404)
T PRK09265 276 --------------L----CANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCV-KPKGALYAFP 336 (404)
T ss_pred --------------c----CCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCccc-CCCcceEEEE
Confidence 0 0122233333333321 2222222 35566778888899888787765 444454444
Q ss_pred EeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 407 RVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
++.+.... . ......+.+.+.+.|+.+..+..+. +..++|+++. .+++++++.++.|.++++.
T Consensus 337 ~~~~~~~~------~---~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~---~~~e~l~~~l~rl~~~l~~ 401 (404)
T PRK09265 337 KLDPKVYP------I---HDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTL---PRVDDLEEAIGRIGRFLSG 401 (404)
T ss_pred EecccccC------C---CCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeC---CCHHHHHHHHHHHHHHHHH
Confidence 44431000 0 0012345566667787655444432 3578999983 4677999999999887764
No 151
>PRK08068 transaminase; Reviewed
Probab=99.82 E-value=1.3e-17 Score=168.12 Aligned_cols=322 Identities=9% Similarity=0.009 Sum_probs=202.2
Q ss_pred HHHHHHhhcCCC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCc-ceEEcCCchHHHHHHHHHHHHHHHHHccc
Q 038818 90 LGEMLSSGFNVV-GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTG-GGVIQGTTCEAILCTLAAARDQILNEIGR 167 (486)
Q Consensus 90 ~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~-~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 167 (486)
+.+.+...++.. ...|...++..++.+.+.+|+.+.+|.+.+. . +.++|+|+++++..++.+...
T Consensus 50 ~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~-----~~~i~it~G~~~~l~~~~~~~~~-------- 116 (389)
T PRK08068 50 IVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDP-----ETEVAILFGGKAGLVELPQCLMN-------- 116 (389)
T ss_pred HHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CccEEEcCCcHHHHHHHHHHhCC--------
Confidence 455555444432 2345445567889999999998888864321 2 578899998888765554432
Q ss_pred cCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC
Q 038818 168 ENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD 247 (486)
Q Consensus 168 ~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id 247 (486)
+++.|+++..+|.....+++..|+ +++.+|+++++.+.+|+++|++.+.+. +.+|+++.++||||.+-
T Consensus 117 ---~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~P~NPTG~~~ 184 (389)
T PRK08068 117 ---PGDTILVPDPGYPDYLSGVALARA---QFETMPLIAENNFLPDYTKIPEEVAEK------AKLMYLNYPNNPTGAVA 184 (389)
T ss_pred ---CCCEEEEcCCCCcchHHHHHhcCC---EEEEeecccccCCCCCHHHHHHhcccc------ceEEEEECCCCCCCCcC
Confidence 667788999999999999999999 999999975445789999999888543 34677788999999996
Q ss_pred Cc---hHHHHHHHHhCceEEeeccccchhccCccchhhhcCC--CCCCceeeccccccCC-CCcceEEEeeCchHHHHHh
Q 038818 248 PL---GPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGI--EGADSFSLNAHKWFFT-TLDCCCLWVKNPNALIKAL 321 (486)
Q Consensus 248 pl---~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~--~~aDsi~~~~hK~l~~-p~~~g~~~~~~~~~~~~~~ 321 (486)
+. ++|.++|++|++++++|.+|+............+... ..-..+..++.|.++. ..-+|+++. +++......
T Consensus 185 s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~-~~~l~~~l~ 263 (389)
T PRK08068 185 TKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVG-NESVIEAIN 263 (389)
T ss_pred CHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEec-CHHHHHHHH
Confidence 64 6888899999999999999965432111111111111 1122456688999964 445788765 343332211
Q ss_pred cCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC
Q 038818 322 STNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR 399 (486)
Q Consensus 322 ~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 399 (486)
.....+.. + ..+....++...+ +.+.+++..++..+.++++.+.|+++ ++.+. +|
T Consensus 264 ~~~~~~~~-------------------~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~-~~ 320 (389)
T PRK08068 264 LLQDHLFV-------------------S--LFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREI-GWEVD-AP 320 (389)
T ss_pred HHHhhccC-------------------C--CChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CC
Confidence 11111100 0 0111112222222 34566777888888899999999887 67654 55
Q ss_pred CeeEE-EEEeecCCCCCCCCCCccchHHHHHHHHHHHHh-cCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHH
Q 038818 400 NFAVV-CFRVLPSASGLGDGKANEGANELNRKLLESINA-SGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVV 475 (486)
Q Consensus 400 ~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l 475 (486)
..+.+ .+.+.+.. ...++.+.+.+ .|+.+..+..+. +..++|+++.. .++.+...++.|
T Consensus 321 ~g~~~~~v~~~~~~--------------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~---~~~~l~~al~~l 383 (389)
T PRK08068 321 KGSFFAWMPVPKGY--------------TSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLT---DEERLREAVERI 383 (389)
T ss_pred CeeEEEEEECCCCC--------------CHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcC---CHHHHHHHHHHH
Confidence 55554 44553210 12456777765 577544433222 35699999952 455666666666
Q ss_pred HH
Q 038818 476 QE 477 (486)
Q Consensus 476 ~~ 477 (486)
.+
T Consensus 384 ~~ 385 (389)
T PRK08068 384 GK 385 (389)
T ss_pred HH
Confidence 54
No 152
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.82 E-value=3.4e-18 Score=171.39 Aligned_cols=287 Identities=15% Similarity=0.140 Sum_probs=186.3
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ 186 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 186 (486)
..|...++| +.+++++|.+ ..+++++|+.|+..++.+... +++.|+++...|.+..
T Consensus 59 ~~pt~~~Le----~~lA~l~G~~---------~al~~~sG~~Ai~~~l~al~~-----------~Gd~Vv~~~~~y~~~~ 114 (386)
T PRK06767 59 GNPTVKLFE----ERMAVLEGGE---------EALAFGSGMAAISATLIGFLK-----------AGDHIICSNGLYGCTY 114 (386)
T ss_pred CCcchHHHH----HHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCcHHHHH
Confidence 345555555 5578888864 357788888887666554432 6677888888776654
Q ss_pred HHHH----HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCce
Q 038818 187 KAAQ----IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIW 262 (486)
Q Consensus 187 ~a~~----~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~ 262 (486)
..+. ..|+ ++..++ ..|++++++++++.+ .+|+++.++|++|.+.|+++|.++|+++|++
T Consensus 115 ~~~~~~~~~~gi---~~~~~~-------~~d~~~l~~~i~~~t------klV~lesp~NptG~v~dl~~I~~la~~~g~~ 178 (386)
T PRK06767 115 GFLEVLEEKFMI---THSFCD-------METEADIENKIRPNT------KLIFVETPINPTMKLIDLKQVIRVAKRNGLL 178 (386)
T ss_pred HHHHHHHhhcCe---EEEEeC-------CCCHHHHHHhhCcCc------eEEEEeCCCCCCceecCHHHHHHHHHHcCCE
Confidence 4433 3344 444443 247899998886543 4788999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccC
Q 038818 263 VHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVD 340 (486)
Q Consensus 263 lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 340 (486)
+++|+||+.+....+ .. .++|.++.+++|+++++.. +|+++.+++.. .+........+.
T Consensus 179 vivD~a~a~~~~~~p-l~------~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i-~~~~~~~~~~~g----------- 239 (386)
T PRK06767 179 VIVDNTFCSPYLQRP-LE------LGCDAVVHSATKYIGGHGDVVAGVTICKTRAL-AEKIRPMRKDIG----------- 239 (386)
T ss_pred EEEECCCcccccCCc-hh------cCCcEEEecCcceecCCCCceeEEEEeChHHH-HHHHHHHHHHhC-----------
Confidence 999999975443222 11 2789999999999987754 56666665432 221110000010
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC-----------CeeEEEEEee
Q 038818 341 YKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR-----------NFAVVCFRVL 409 (486)
Q Consensus 341 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------~~~~v~f~~~ 409 (486)
-....+.+|+.++ +.+.+..++++..+++.++.+.|+++|+++.+.-| ..++++|.+.
T Consensus 240 ---------~~~~~~~a~l~~~--~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~ 308 (386)
T PRK06767 240 ---------GIMAPFDAWLLLR--GLKTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIK 308 (386)
T ss_pred ---------CCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEc
Confidence 0112344565554 44566778899999999999999999999865422 3468999886
Q ss_pred cCCCCCCCCCCccchHHHHHHHHHHHHhcCcE--------EEe-ee-----eE-------C--CEeEEEEEecCCCCcHH
Q 038818 410 PSASGLGDGKANEGANELNRKLLESINASGQL--------YVS-HG-----MV-------A--GIYFIRFAVGATLTEDR 466 (486)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~--------~~~-~~-----~~-------~--~~~~lR~~~~~~~tt~~ 466 (486)
.. .+...++.+.|...+.. .+. +. .. . ..+.+|+|++- |
T Consensus 309 ~~-------------~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl-----E 370 (386)
T PRK06767 309 GG-------------KEETQAFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL-----E 370 (386)
T ss_pred CC-------------HHHHHHHHHhCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEecc-----C
Confidence 32 22345666665433321 011 10 00 1 24689999953 3
Q ss_pred HHHHHHHHHHHHHHH
Q 038818 467 HVIAAWKVVQEKLDG 481 (486)
Q Consensus 467 did~~i~~l~~~~~~ 481 (486)
|+|.+++.|.++++.
T Consensus 371 ~~~dl~~dl~~al~~ 385 (386)
T PRK06767 371 SWEDIVSDLEQALKK 385 (386)
T ss_pred CHHHHHHHHHHHHhh
Confidence 678888888877654
No 153
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.82 E-value=3.7e-18 Score=169.94 Aligned_cols=289 Identities=16% Similarity=0.171 Sum_probs=192.0
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ 186 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 186 (486)
..|....+|+ .++++.|.+ .+++++||++|+..++.+... +++.|+++...|.+..
T Consensus 51 ~npt~~~Le~----~lA~leg~e---------~ivvt~gg~~Ai~~~l~all~-----------~Gd~Il~~~~~y~~~~ 106 (388)
T PRK08861 51 GNPNRGLLEQ----TLSELESGK---------GAVVTNCGTSALNLWVSALLG-----------PDDLIVAPHDCYGGTY 106 (388)
T ss_pred CCchHHHHHH----HHHHHhCCC---------eEEEECCHHHHHHHHHHHHcC-----------CCCEEEEcCCchHHHH
Confidence 3455555555 467777742 689999999998877765532 5677888888887644
Q ss_pred HHH----HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCce
Q 038818 187 KAA----QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIW 262 (486)
Q Consensus 187 ~a~----~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~ 262 (486)
..+ ...|+ +++.++ ..|++++++++++++ .+|+++.++|++|.+-|+++|+++|+++|++
T Consensus 107 ~~~~~~~~~~gi---~v~~vd-------~~d~e~l~~~i~~~t------klV~lesP~NPtG~v~dl~~I~~la~~~gi~ 170 (388)
T PRK08861 107 RLFNTRANKGDF---KVQFVD-------QSDAAALDAALAKKP------KLILLETPSNPLVRVVDIAELCQKAKAVGAL 170 (388)
T ss_pred HHHHHHHhcCCe---EEEEEC-------CCCHHHHHHhcCcCC------eEEEEECCCCCCCcccCHHHHHHHHHHcCCE
Confidence 433 22345 666664 248899998886543 4889999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccC
Q 038818 263 VHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVD 340 (486)
Q Consensus 263 lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 340 (486)
++||++|+.+....| .. -++|.++.++|||+++|.+ .|++..++++...+... ...+
T Consensus 171 vIvDea~~~~~~~~p-l~------~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~-~~~~------------- 229 (388)
T PRK08861 171 VAVDNTFLTPVLQKP-LE------LGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAW-WGNC------------- 229 (388)
T ss_pred EEEECCccccccCCC-cc------cCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHH-HHhc-------------
Confidence 999999976544322 11 1799999999999998865 56666666544332210 0001
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe-cC-----C-----------CeeE
Q 038818 341 YKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIV-AP-----R-----------NFAV 403 (486)
Q Consensus 341 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~-----~-----------~~~~ 403 (486)
.|-...+...|..++ |.+-+.-+++++.++|..+.+.|+++|.++-+ .| | ..++
T Consensus 230 -------~G~~~~p~~a~l~~r--gl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~ 300 (388)
T PRK08861 230 -------IGATGTPFDSYMTLR--GIRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSM 300 (388)
T ss_pred -------cCCCCChHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCce
Confidence 111234556676665 66888899999999999999999999987533 32 1 2458
Q ss_pred EEEEeecCCCCCCCCCCccchHHHHHHHHHHHHh--cCc-------EEEeee-----eE-------CC--EeEEEEEecC
Q 038818 404 VCFRVLPSASGLGDGKANEGANELNRKLLESINA--SGQ-------LYVSHG-----MV-------AG--IYFIRFAVGA 460 (486)
Q Consensus 404 v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~g~-------~~~~~~-----~~-------~~--~~~lR~~~~~ 460 (486)
++|.+... .+...++.+.|.- .+. ++..+. .. .| .+.+|+|++-
T Consensus 301 ~sf~~~~~-------------~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl 367 (388)
T PRK08861 301 LSFEFAGS-------------FEQLKVFVKALALFSLAESLGGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVGL 367 (388)
T ss_pred EEEEeCCC-------------HHHHHHHHhcCCcceEccCCCCCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeCc
Confidence 88888632 1223345554321 111 111111 00 11 4589999952
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHh
Q 038818 461 TLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 461 ~~tt~~did~~i~~l~~~~~~l~ 483 (486)
||+|.+++.|++.++.+.
T Consensus 368 -----E~~~dli~Dl~~al~~~~ 385 (388)
T PRK08861 368 -----EDAQDLIADLDQAFAKAA 385 (388)
T ss_pred -----CCHHHHHHHHHHHHHHHH
Confidence 367777888887776654
No 154
>PLN02271 serine hydroxymethyltransferase
Probab=99.82 E-value=4.2e-18 Score=170.90 Aligned_cols=326 Identities=10% Similarity=0.037 Sum_probs=204.0
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCC-CccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCC---C
Q 038818 106 MSSPAATELENIVMDWLGEMLKLPKS-FLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQ---T 181 (486)
Q Consensus 106 ~~~~~~~~le~~~~~~l~~l~g~~~~-~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~---~ 181 (486)
.......++|.-+++...++||++.. | +.-+-.-+|+.||+.++.+... +++.|+..+. .
T Consensus 187 ~G~~~iD~iE~la~era~~lF~~~~~~~-----gaNVQp~SGs~AN~aV~~ALl~-----------PGD~IL~ldl~~GG 250 (586)
T PLN02271 187 TGNQYIDQIERLCCERALAAFGLDSEKW-----GVNVQPYSCTSANFAVYTGLLL-----------PGDRIMGLDSPSGG 250 (586)
T ss_pred CCChhHHHHHHHHHHHHHHHhCCccccc-----ccceeeccHHHHHHHHHHHhcC-----------CCCEEEEecCCCCC
Confidence 34455678999999999999998753 2 1123344889999887766533 6777776544 4
Q ss_pred chHHH------HHHHHcCCCCCCeEEEe--cCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHH
Q 038818 182 HSALQ------KAAQIAGIDPKNFRAIK--TTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLC 253 (486)
Q Consensus 182 H~s~~------~a~~~~G~g~~~v~~v~--~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~ 253 (486)
|.+.. +.+...|+ .+..+| +|+ +++.+|.++|++..... +|.+|++.+..++ ..-|+++|+
T Consensus 251 Hlshg~~~~~g~~vs~sG~---~~~~vpY~~d~-~~g~IDyd~lek~a~~~-----rPKLII~g~Sayp--r~~D~~~i~ 319 (586)
T PLN02271 251 HMSHGYYTPGGKKVSGASI---FFESLPYKVNP-QTGYIDYDKLEEKALDF-----RPKILICGGSSYP--REWDYARFR 319 (586)
T ss_pred chhcccccccccccccccc---eEEEEEccccc-ccCccCHHHHHHHhhhc-----CCeEEEECchhcc--CcCCHHHHH
Confidence 55532 23345565 555555 553 36799999999855332 3667777554444 668999999
Q ss_pred HHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccC
Q 038818 254 DIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKAS 333 (486)
Q Consensus 254 ~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~ 333 (486)
+||+++|+++++|+||..+.+....+... +..+|+++.++||||.+|.| |+++++++.. .. ..+....+...
T Consensus 320 eIAdevGA~LmvD~AH~aGLIa~g~~~sP---~~~aDvvt~TTHKtLrGPrG-G~I~~r~~~~--~~--~~g~~gs~s~~ 391 (586)
T PLN02271 320 QIADKCGAVLMCDMAHISGLVAAKECVNP---FDYCDIVTSTTHKSLRGPRG-GIIFYRKGPK--LR--KQGMLLSHGDD 391 (586)
T ss_pred HHHHHcCCEEEEECcccccccccCcCCCC---CcCCcEEEeCCcccCCCCCc-eEEEeccccc--cc--ccCCccccccc
Confidence 99999999999999998887765433222 23799999999999999998 8888765421 00 00000000000
Q ss_pred ----CCCCccCCC-CccccCCCCCC-chHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC-CCeeEEEE
Q 038818 334 ----DSKQVVDYK-DWQITLSRRFR-ALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP-RNFAVVCF 406 (486)
Q Consensus 334 ----~~~~~~~~~-~~~~~~sr~~~-~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f 406 (486)
+.....+.. -.+++++-... ..++..+++......+++..++..++|+.|.+.|.+. |++++.. .+.+.+.+
T Consensus 392 ~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~-G~~vv~ggTdnHlvLv 470 (586)
T PLN02271 392 NSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRR-KCRLVTGGTDNHLLLW 470 (586)
T ss_pred cccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC-CCeEeeCCCCcceeee
Confidence 000000000 01334443322 3455566666656677899999999999999999887 8998763 34567776
Q ss_pred EeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeE-----CCEeEEEEEe---cCCCCcHHHHHHHHHHHHHH
Q 038818 407 RVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMV-----AGIYFIRFAV---GATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-----~~~~~lR~~~---~~~~tt~~did~~i~~l~~~ 478 (486)
.+.+.+. .... ..+.|...|+.+-.-+.. .....+|+.. +.....++|++++.+.|.++
T Consensus 471 Dl~~~g~----------~G~~---ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~ 537 (586)
T PLN02271 471 DLTTLGL----------TGKN---YEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRA 537 (586)
T ss_pred cCcccCC----------CHHH---HHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHH
Confidence 6654321 0222 233333445532111111 1235689886 33344668999988888887
Q ss_pred HH
Q 038818 479 LD 480 (486)
Q Consensus 479 ~~ 480 (486)
++
T Consensus 538 ~~ 539 (586)
T PLN02271 538 AQ 539 (586)
T ss_pred Hh
Confidence 65
No 155
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=7.6e-18 Score=170.10 Aligned_cols=240 Identities=14% Similarity=0.129 Sum_probs=158.0
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ 186 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 186 (486)
.+|...++| +.++++.|.+ ..++|++||+|+..++..... +++.|+++...|.+..
T Consensus 62 ~~p~~~~le----~~lA~l~g~~---------~av~~sSGt~Al~~al~~ll~-----------~Gd~Vi~~~~~y~~t~ 117 (433)
T PRK08134 62 SNPTVAVLE----ERVAALEGGV---------GAIATASGQAALHLAIATLMG-----------AGSHIVASSALYGGSH 117 (433)
T ss_pred cChHHHHHH----HHHHHHhCCC---------cEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEeCCccHHHH
Confidence 345545555 5578888764 358999999999877765522 5677888888887654
Q ss_pred HHH----HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCce
Q 038818 187 KAA----QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIW 262 (486)
Q Consensus 187 ~a~----~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~ 262 (486)
..+ ...|+ +++.++++ |+++|+++|++++ .+|++++++|++|.+.|+++|+++|+++|++
T Consensus 118 ~~~~~~l~~~Gi---~v~~vd~~-------d~~~l~~~i~~~T------klV~~e~~~np~g~v~Di~~I~~la~~~gi~ 181 (433)
T PRK08134 118 NLLHYTLRRFGI---ETTFVKPG-------DIDGWRAAIRPNT------RLLFGETLGNPGLEVLDIPTVAAIAHEAGVP 181 (433)
T ss_pred HHHHHHHhhCCe---EEEEECCC-------CHHHHHHhcCCCC------eEEEEECCCcccCcccCHHHHHHHHHHcCCE
Confidence 443 44688 88888753 7999999998754 3788889999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCc-ceEEEeeCchH-HHH--Hh-cCCcccccCccCCCCC
Q 038818 263 VHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD-CCCLWVKNPNA-LIK--AL-STNPEFLRNKASDSKQ 337 (486)
Q Consensus 263 lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~~~~~~-~~~--~~-~~~~~y~~~~~~~~~~ 337 (486)
++||++++.+....+ .. -++|.++.|+|||++++.. .|.+++..... +.. .+ ...++...........
T Consensus 182 livD~t~a~~~~~~p-l~------~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 254 (433)
T PRK08134 182 LLVDSTFTTPYLLRP-FE------HGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAE 254 (433)
T ss_pred EEEECCCcccccCCc-hh------cCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhh
Confidence 999999987665332 11 2899999999999987642 45555532211 000 00 0001110000000000
Q ss_pred ccCCCC--------ccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Q 038818 338 VVDYKD--------WQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEI 395 (486)
Q Consensus 338 ~~~~~~--------~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 395 (486)
...... .....+.......+|..++ |.+.+..++++..+++..+.+.|+++|.++-
T Consensus 255 ~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~~--gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~ 318 (433)
T PRK08134 255 ESTVAAFLLRARREGLRDFGACLSPMNAWQLLQ--GIETLPLRMERHVANTRKVVAFLASHPAVAR 318 (433)
T ss_pred ccchhHHHHHHHHHHHHhcCCCCCHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCccE
Confidence 000000 0011122334456665554 6688999999999999999999999988754
No 156
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.81 E-value=6e-18 Score=169.47 Aligned_cols=290 Identities=19% Similarity=0.209 Sum_probs=189.0
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH--
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA-- 184 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-- 184 (486)
..|...++|+ .+++++|.+. .+++++|+.|+..++.+... +++.|+++...|.+
T Consensus 57 ~~p~~~~le~----~lA~l~g~~~---------av~~~sG~~Ai~~~l~al~~-----------~Gd~Vi~~~~~y~~t~ 112 (391)
T TIGR01328 57 GNPTVSNLEG----RIAFLEGTEA---------AVATSSGMGAIAATLLTILK-----------AGDHLISDECLYGCTF 112 (391)
T ss_pred CCchHHHHHH----HHHHHhCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEecCcchHHH
Confidence 3455555554 5788888753 58889999888776655432 56677778776643
Q ss_pred --HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCce
Q 038818 185 --LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIW 262 (486)
Q Consensus 185 --~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~ 262 (486)
+...+...|+ +++.++.+ |++++++++++.+ .+|+++.++|++|.+-|+++|+++|+++|++
T Consensus 113 ~~~~~~~~~~G~---~~~~vd~~-------d~e~l~~~i~~~t------klV~le~p~Np~G~v~dl~~I~~la~~~gi~ 176 (391)
T TIGR01328 113 ALLEHALTKFGI---QVDFINMA-------IPEEVKAHIKDNT------KIVYFETPANPTMKLIDMERVCRDAHSQGVK 176 (391)
T ss_pred HHHHHHHhcCCe---EEEEECCC-------CHHHHHHhhccCC------eEEEEECCCCCCCcccCHHHHHHHHHHcCCE
Confidence 3455566787 78877653 7899998887543 4788999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcc-eEEEeeCchHHHHHhcCCcccccCccCCCCCccCC
Q 038818 263 VHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDC-CCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDY 341 (486)
Q Consensus 263 lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~-g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 341 (486)
+++|++|+.+....+ .. .++|.++.+++|+++++... |.+++.+++...+.......++
T Consensus 177 livD~a~a~~~~~~~-~~------~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~------------- 236 (391)
T TIGR01328 177 VIVDNTFATPMLTNP-VA------LGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDM------------- 236 (391)
T ss_pred EEEECCCchhccCCc-hh------cCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhC-------------
Confidence 999999976543221 11 27999999999999987642 3344555544432221110000
Q ss_pred CCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC-----------------CeeEE
Q 038818 342 KDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR-----------------NFAVV 404 (486)
Q Consensus 342 ~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------------~~~~v 404 (486)
.+.......+|..++ +.+.+..++++..+++.++.+.|+++|+++.+.-| ..+++
T Consensus 237 ------~g~~l~~~~a~l~l~--~L~tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~ 308 (391)
T TIGR01328 237 ------TGSVISPFDAWLILR--GLKTLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMI 308 (391)
T ss_pred ------CCCCCCcHHHHHHHh--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceE
Confidence 011234455566665 44667788999999999999999999987644321 14588
Q ss_pred EEEeecCCCCCCCCCCccchHHHHHHHHHHHHh--cCcE------EEe-ee-----eE-------CC--EeEEEEEecCC
Q 038818 405 CFRVLPSASGLGDGKANEGANELNRKLLESINA--SGQL------YVS-HG-----MV-------AG--IYFIRFAVGAT 461 (486)
Q Consensus 405 ~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~g~~------~~~-~~-----~~-------~~--~~~lR~~~~~~ 461 (486)
+|.+.+. .+...++.+.|.- .+.- .+. +. .. .| .+.+|+|++-
T Consensus 309 s~~~~~~-------------~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl- 374 (391)
T TIGR01328 309 TFELKGG-------------FAGAKKLLNNLKLIRLAVSLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGL- 374 (391)
T ss_pred EEEeCCC-------------HHHHHHHHHhCCcceEecCCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeCc-
Confidence 8887632 1223445554321 1110 011 10 00 11 4579999952
Q ss_pred CCcHHHHHHHHHHHHHHHHHH
Q 038818 462 LTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 462 ~tt~~did~~i~~l~~~~~~l 482 (486)
||+|.+++.|.++++.|
T Consensus 375 ----E~~~dl~~dl~~al~~~ 391 (391)
T TIGR01328 375 ----EDADDLIADLKQALDAL 391 (391)
T ss_pred ----CCHHHHHHHHHHHHhhC
Confidence 37888888888877643
No 157
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=4.2e-17 Score=162.02 Aligned_cols=284 Identities=13% Similarity=0.052 Sum_probs=189.3
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDP 196 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~ 196 (486)
++++.+++.++.+++ ..++|+|+++++..++.+... +++.|+++..++..+...++..|+
T Consensus 63 ~lr~~ia~~~~~~~~-------~i~it~G~~~~l~~~~~~l~~-----------~gd~Vlv~~p~y~~~~~~~~~~g~-- 122 (351)
T PRK14807 63 KLREELARYCSVVPT-------NIFVGNGSDEIIHLIMLAFIN-----------KGDVVIYPHPSFAMYSVYSKIAGA-- 122 (351)
T ss_pred HHHHHHHHHhCCCcc-------cEEEecCHHHHHHHHHHHhcC-----------CCCEEEEeCCChHHHHHHHHHcCC--
Confidence 345566677787655 688999988887666555432 567788888888888888899999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccC
Q 038818 197 KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACIC 276 (486)
Q Consensus 197 ~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~ 276 (486)
+++.+++++ ++.+|++++++++++. .+.+|+++.++|+||.+-+.+++.++|++++.++++|++|+.+. .
T Consensus 123 -~~~~v~~~~--~~~~d~~~l~~~~~~~-----~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~--~ 192 (351)
T PRK14807 123 -VEIPVKLKE--DYTYDVGSFIKVIEKY-----QPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFY--G 192 (351)
T ss_pred -eEEEeecCC--CCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhc--c
Confidence 999999874 5789999999988642 13467778999999999999999999999999999999996532 1
Q ss_pred ccchhhhcCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcC-CcccccCccCCCCCccCCCCccccCCCCCCc
Q 038818 277 PEFRHFIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALST-NPEFLRNKASDSKQVVDYKDWQITLSRRFRA 354 (486)
Q Consensus 277 ~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~ 354 (486)
......+... .-..+..++.|.++ ....+|+++. +++... .+.. ...+ ....
T Consensus 193 ~~~~~~~~~~-~~vi~~~S~SK~~~~~GlRiG~~v~-~~~~~~-~~~~~~~~~-----------------------~~~~ 246 (351)
T PRK14807 193 NTIVDVINEF-ENLIVLRTLSKAFGLAGLRVGYAVA-NENILK-YLNLVKSPY-----------------------NINS 246 (351)
T ss_pred cchHHHhhhC-CCEEEEecchHhcccchhceeeeec-CHHHHH-HHHHccCCC-----------------------CcCH
Confidence 1111112111 11255677899997 4456787775 333332 2211 1000 0122
Q ss_pred hHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHH
Q 038818 355 LKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLES 434 (486)
Q Consensus 355 l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 434 (486)
+...++.+.+....+++.+++..+.++++.+.|++.+++++. ++..+.+.+++.. ..++.+.
T Consensus 247 ~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~-~~~~~~~~i~~~~-----------------~~~~~~~ 308 (351)
T PRK14807 247 LSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPGIKVY-PSKTNFILVKFKD-----------------ADYVYQG 308 (351)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-cCCccEEEEEcCC-----------------HHHHHHH
Confidence 333444444433456777777788888899999888888764 5554544444421 2356667
Q ss_pred HHhcCcEEEeeee-ECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 435 INASGQLYVSHGM-VAGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 435 l~~~g~~~~~~~~-~~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
+.++|+.+..... .....++|+++. +.++.++++++|+++
T Consensus 309 l~~~gV~v~~~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~ 349 (351)
T PRK14807 309 LLERGILVRDFSKVEGLEGALRITVS----SCEANDYLINGLKEL 349 (351)
T ss_pred HHHCCEEEEECCCCCCCCCeEEEEcC----CHHHHHHHHHHHHHh
Confidence 7777875432221 123568999985 356889999999875
No 158
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.81 E-value=1.3e-17 Score=167.22 Aligned_cols=229 Identities=20% Similarity=0.214 Sum_probs=161.0
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH----HHHHH
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ----KAAQI 191 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~----~a~~~ 191 (486)
.++.+.+++++|.+ ..++++||++|+..++.+... +++.|+++...|.+.. ..+..
T Consensus 64 ~~le~~la~l~g~~---------~~v~~ssG~~Ai~~al~al~~-----------~Gd~Vi~~~~~y~~t~~~~~~~~~~ 123 (390)
T PRK08133 64 TMFQERLAALEGAE---------ACVATASGMAAILAVVMALLQ-----------AGDHVVSSRSLFGSTVSLFEKIFAR 123 (390)
T ss_pred HHHHHHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEccCcchhHHHHHHHHHHH
Confidence 34556688888864 358899999999877765532 5667888888886533 45567
Q ss_pred cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccc
Q 038818 192 AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAG 271 (486)
Q Consensus 192 ~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~ 271 (486)
.|+ +++.++++ |++++++++++.+ .+|+++.++|++|.+.|+++|+++|+++|+++++|++++.
T Consensus 124 ~G~---~v~~vd~~-------d~~~l~~~i~~~t------klV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~ 187 (390)
T PRK08133 124 FGI---ETTFVDLT-------DLDAWRAAVRPNT------KLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCT 187 (390)
T ss_pred cCc---EEEEECCC-------CHHHHHHhcCcCC------eEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcc
Confidence 788 88888753 7889998887543 4788889999999999999999999999999999999866
Q ss_pred hhccCccchhhhcCCCCCCceeeccccccCCCCc-ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCC
Q 038818 272 SACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD-CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSR 350 (486)
Q Consensus 272 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr 350 (486)
+....+ .. .++|.++.++||+++++.. .|.+++.++..+.+.. .+.. .++.
T Consensus 188 ~~~~~p-l~------~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~----~~~~-----------------~~g~ 239 (390)
T PRK08133 188 PALQQP-LK------LGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVF----GFLR-----------------TAGP 239 (390)
T ss_pred cccCCc-hh------hCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHH----HHHH-----------------HhCC
Confidence 543222 11 1689999999999987642 3344444433322211 0110 0111
Q ss_pred CCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC-----------------CeeEEEEEeec
Q 038818 351 RFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR-----------------NFAVVCFRVLP 410 (486)
Q Consensus 351 ~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------------~~~~v~f~~~~ 410 (486)
......+|..++ |.+.+..++++..+++..+.+.|+++|+++.+.-| ..++++|.+.+
T Consensus 240 ~~~~~~a~~~l~--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~ 314 (390)
T PRK08133 240 TLSPFNAWVFLK--GLETLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKG 314 (390)
T ss_pred CCCHHHHHHHHc--ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcC
Confidence 223445566554 55788889999999999999999999988654321 14588888853
No 159
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.81 E-value=8e-18 Score=175.20 Aligned_cols=368 Identities=12% Similarity=0.121 Sum_probs=222.6
Q ss_pred HHHHHHhhhcCCCcCCCCCCcceecC---C--CCCHHHHHHHH-HHh-hcC-CCccccccChhhHHHHHHHHHHHHHHcC
Q 038818 56 ILQDVQQHIVPGITHWQSPYYFAYFP---S--SGSIAGFLGEM-LSS-GFN-VVGFNWMSSPAATELENIVMDWLGEMLK 127 (486)
Q Consensus 56 il~~l~~~~~~~~~~~~~p~~~~~~~---~--~~~~~~~~~~~-l~~-~~n-~~~~~~~~~~~~~~le~~~~~~l~~l~g 127 (486)
+++.|.+....+...|+.|.+.|-.. + +.......++- +.. .-+ -.....-..|.....|.+ +..|++||
T Consensus 132 ~~~aL~~y~~~~~~sfh~PGHkgG~~f~k~p~G~~f~~f~Gen~~r~Dlt~ev~~LddLl~~~G~i~eAe--~~AA~~fg 209 (714)
T PRK15400 132 LTKALFKYVREGKYTFCTPGHMGGTAFQKSPVGSLFYDFFGPNTMKSDISISVSELGSLLDHSGPHKEAE--EYIARVFN 209 (714)
T ss_pred HHHHHHHHHhCCCceeeCCCCCCCCCCCCCchhHHHHHHhhhhhhhhhccccccCCCCCCCCChHHHHHH--HHHHHHhC
Confidence 55566666666777888886654221 1 11222333321 111 111 111111233333444444 88999999
Q ss_pred CCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCC
Q 038818 128 LPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKS 207 (486)
Q Consensus 128 ~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~ 207 (486)
.+.+| ++++|+|.+|..++.++.. +++.|++...+|-|+..++.+.|+ ..++++...+
T Consensus 210 Ad~ty--------fvvNGTS~~n~av~~a~~~-----------~Gd~VLvdRN~HKSv~haLilsga---~PVYl~P~rn 267 (714)
T PRK15400 210 ADRSY--------MVTNGTSTANKIVGMYSAP-----------AGSTVLIDRNCHKSLTHLMMMSDV---TPIYFRPTRN 267 (714)
T ss_pred CCcEE--------EEeCchHHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHcCC---eEEEeccccc
Confidence 99875 8899999999877776654 788999999999999999999999 9999876532
Q ss_pred CC---cccC-----HHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccc
Q 038818 208 SS---FTLT-----PESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEF 279 (486)
Q Consensus 208 ~~---~~~d-----~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~ 279 (486)
.. +.++ .+.++++|++... -..|+.+++|.+ |..|.+-++++|.++|+.++ +|||+|||+.+.+.|.+
T Consensus 268 ~~Gi~g~I~~~~~~~e~i~~~i~~~p~-ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~ 343 (714)
T PRK15400 268 AYGILGGIPQSEFQHATIAKRVKETPN-ATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIY 343 (714)
T ss_pred ccCCccCCCccccCHHHHHHHHHhCcc-ccCccEEEEECC-CCccEecCHHHHHHHhCCCC--EEEEccchhhhccCccc
Confidence 21 2345 8999999987543 245767888887 66899999999999999887 79999999988887765
Q ss_pred hhhhcCC-CCC---C--ceeeccccccCCCCcceEEEeeCc---hHHHHHhcCCcccccCccCCCCCccCCCCccccCCC
Q 038818 280 RHFIDGI-EGA---D--SFSLNAHKWFFTTLDCCCLWVKNP---NALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSR 350 (486)
Q Consensus 280 ~~~~~~~-~~a---D--si~~~~hK~l~~p~~~g~~~~~~~---~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr 350 (486)
+... .+ .++ | .++-|.||.+.+--+++++.++.. +.+.+++. ..+.|.
T Consensus 344 ~~~s-am~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~vd~~~~n~a~~----------------------m~~STS 400 (714)
T PRK15400 344 EGKC-GMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYM----------------------MHTTTS 400 (714)
T ss_pred CCcC-hhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCCCCHHHHHHHHH----------------------HHcCCC
Confidence 4211 11 245 5 899999999998888888877653 12222221 011111
Q ss_pred CCCc--hHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCC------eEEecCCCe-eEEEEEeecC----------
Q 038818 351 RFRA--LKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNR------FEIVAPRNF-AVVCFRVLPS---------- 411 (486)
Q Consensus 351 ~~~~--l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~------~~~~~~~~~-~~v~f~~~~~---------- 411 (486)
+.-. ..+-.+.+.+..+.-++++++..+.+..+++.|.++++ |+++.+... ..-||.+.|.
T Consensus 401 PsY~l~ASLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~ 480 (714)
T PRK15400 401 PHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNID 480 (714)
T ss_pred cHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCccccc
Confidence 1111 11112222232112256778888899999999988877 777643210 0112221110
Q ss_pred ---------CCC----C--CCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 412 ---------ASG----L--GDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 412 ---------~~~----~--~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
... . .++ +..+.+.-...+.+.|.++|+. +..+ +...+=+.+ ++..|+++++.++++|.
T Consensus 481 ~~~~~lDP~Klti~tpgi~~~g-~~~~~Gipg~~v~~~L~e~gI~-~E~~---d~~~iLfl~-s~g~t~~~~~~L~~aL~ 554 (714)
T PRK15400 481 NEHMYLDPIKVTLLTPGMKKDG-TMSDFGIPASIVAKYLDEHGIV-VEKT---GPYNLLFLF-SIGIDKTKALSLLRALT 554 (714)
T ss_pred ccccccCCceEEEEeCCCCCCc-cccccCCCHHHHHHHHHHcCCE-EEec---CCCeEEEEe-CCCCCHHHHHHHHHHHH
Confidence 000 0 000 0000111123455566667763 3333 222343444 67889999999999998
Q ss_pred HHHH
Q 038818 477 EKLD 480 (486)
Q Consensus 477 ~~~~ 480 (486)
++-+
T Consensus 555 ~f~~ 558 (714)
T PRK15400 555 DFKR 558 (714)
T ss_pred HHHH
Confidence 8744
No 160
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.81 E-value=3.7e-17 Score=170.22 Aligned_cols=368 Identities=13% Similarity=0.111 Sum_probs=221.8
Q ss_pred HHHHHHhhhcCCCcCCCCCCcceecCCCC-----CHHHHHHHH-HHh-hcC-CCccccccChhhHHHHHHHHHHHHHHcC
Q 038818 56 ILQDVQQHIVPGITHWQSPYYFAYFPSSG-----SIAGFLGEM-LSS-GFN-VVGFNWMSSPAATELENIVMDWLGEMLK 127 (486)
Q Consensus 56 il~~l~~~~~~~~~~~~~p~~~~~~~~~~-----~~~~~~~~~-l~~-~~n-~~~~~~~~~~~~~~le~~~~~~l~~l~g 127 (486)
+++.|.+....+...|+.|.+.|-..-.. ......++- +.. .-+ -.....-..|.....|.+ +..|+.||
T Consensus 132 ~~~aL~~y~~~~~~sfh~PGHkgG~~~~k~p~G~~f~~f~Gen~~r~Dlt~ev~~LddLl~~~G~i~eAe--~~aA~~fg 209 (713)
T PRK15399 132 FTKALFTYVKEGKYTFCTPGHMGGTAYQKSPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAE--EYIARTFG 209 (713)
T ss_pred HHHHHHHHHhCCCceeeCCCCCCCCCCCCCchhHHHHHHhhhhhhhhhccccccCCCCCCCCChHHHHHH--HHHHHHhC
Confidence 55666666667777888886654221101 122233321 111 111 111111233433444444 88899999
Q ss_pred CCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCC
Q 038818 128 LPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKS 207 (486)
Q Consensus 128 ~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~ 207 (486)
.+.+| ++++|+|.+|..++.++.. +++.|+++..+|-|+..++.+.|+ ..++++...+
T Consensus 210 Ad~ty--------fvvNGTS~~n~av~~a~~~-----------~Gd~VLvdRN~HKSv~~aLilsga---~PVYl~P~~n 267 (713)
T PRK15399 210 AEQSY--------IVTNGTSTSNKIVGMYAAP-----------AGSTLLIDRNCHKSLAHLLMMSDV---VPIWLKPTRN 267 (713)
T ss_pred CCcEE--------EEeCChHHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHcCC---eeEEeccccc
Confidence 98864 8899999999887777654 788999999999999999999999 9998875432
Q ss_pred CC---cccCH-----HHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceE-EeeccccchhccCcc
Q 038818 208 SS---FTLTP-----ESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWV-HVDAAYAGSACICPE 278 (486)
Q Consensus 208 ~~---~~~d~-----~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~l-hvD~a~g~~~~~~~~ 278 (486)
.. +.+++ +.++++|++.... .+|..+++|.+ |..|.+-++++|.++| |+.+ |||+|||+.+.+.|.
T Consensus 268 ~~Gi~g~I~~~~~~~e~I~~~i~~~p~~-~~p~~vvit~p-TYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~ 342 (713)
T PRK15399 268 ALGILGGIPRREFTRDSIEEKVAATTQA-QWPVHAVITNS-TYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPI 342 (713)
T ss_pred ccCCcCCCChhhccHHHHHHHHHhCCCc-CCceEEEEECC-CCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCcc
Confidence 21 24455 9999999875432 45778888887 5689999999999999 6766 899999998877775
Q ss_pred chh--hhcCCCCCCce---eeccccccCCCCcceEEEeeCc---hHHHHHhcCCcccccCccCCCCCccCCCCccccCCC
Q 038818 279 FRH--FIDGIEGADSF---SLNAHKWFFTTLDCCCLWVKNP---NALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSR 350 (486)
Q Consensus 279 ~~~--~~~~~~~aDsi---~~~~hK~l~~p~~~g~~~~~~~---~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr 350 (486)
++. .+.+..++|.+ +-|.||.+.+--+++++.++.. +.+.+++.. .+.|.
T Consensus 343 ~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~~~~n~a~~m----------------------~~STS 400 (713)
T PRK15399 343 YQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFMM----------------------HTSTS 400 (713)
T ss_pred cCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCCCHHHHHHHHHH----------------------HcCCC
Confidence 542 22222357877 9999999999999999999763 222222210 11111
Q ss_pred CCCc--hHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHhCCCC------eEEecCCCe-eEEEEEeecC---------
Q 038818 351 RFRA--LKLWLVLRSFG-VANLRNFLRSHVRMAQLFQELVGGDNR------FEIVAPRNF-AVVCFRVLPS--------- 411 (486)
Q Consensus 351 ~~~~--l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~------~~~~~~~~~-~~v~f~~~~~--------- 411 (486)
+.-. ..+-.+.+.+. ..| ++++++..+.+..+++.|.++.+ |+++.+... ..-||.+.+.
T Consensus 401 PsY~LmASLD~a~~~m~~~~G-~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~ 479 (713)
T PRK15399 401 PSYPIVASVETAAAMLRGNPG-KRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDA 479 (713)
T ss_pred cHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCccccccccc
Confidence 1111 11111222222 233 55778888888899999887765 676643210 0012211110
Q ss_pred ----------CC----CCCC-CCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 412 ----------AS----GLGD-GKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 412 ----------~~----~~~~-~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
.. +..+ ..+.+..+.-...+.+.|.++|+. +..+. ...+=+.+ ++..|+++++.++++|.
T Consensus 480 ~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~-~E~~d---~~~vL~l~-s~g~t~~~~~~L~~aL~ 554 (713)
T PRK15399 480 DADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIV-VEKTG---PYNLLFLF-SIGIDKTKAMGLLRGLT 554 (713)
T ss_pred ccccccCCCceEEEEecCcccccccccCCCCHHHHHHHHHHcCCE-EEecC---CCeEEEEe-CCCCCHHHHHHHHHHHH
Confidence 00 0000 000001111123455566667763 33332 22333444 67889999999999998
Q ss_pred HHHH
Q 038818 477 EKLD 480 (486)
Q Consensus 477 ~~~~ 480 (486)
++-+
T Consensus 555 ~f~~ 558 (713)
T PRK15399 555 EFKR 558 (713)
T ss_pred HHHH
Confidence 7744
No 161
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=2.9e-17 Score=163.51 Aligned_cols=286 Identities=15% Similarity=0.086 Sum_probs=190.0
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDP 196 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~ 196 (486)
++++.+++.++.+++ .+++|+|+++++..++.+..+ +++.|+++..+|......++..|+
T Consensus 64 ~lr~aia~~~~~~~~-------~I~it~G~~~al~~~~~~l~~-----------~gd~vlv~~P~y~~~~~~~~~~g~-- 123 (353)
T PRK05387 64 ALRQAIAAYYGLDPE-------QVFVGNGSDEVLAHAFLAFFN-----------HDRPLLFPDITYSFYPVYAGLYGI-- 123 (353)
T ss_pred HHHHHHHHHhCCCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEeCCCHHHHHHHHHHcCC--
Confidence 566777888887665 799999999998777766543 667788898888778888899999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh-CceEEeeccccchhcc
Q 038818 197 KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY-SIWVHVDAAYAGSACI 275 (486)
Q Consensus 197 ~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~-g~~lhvD~a~g~~~~~ 275 (486)
+++.+|.++ ++.+|+++|++ .+ .+|+++.++||||.+-|.+++.++++++ ++++++|.+|..+.
T Consensus 124 -~~~~v~~~~--~~~~d~~~l~~----~~------~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~-- 188 (353)
T PRK05387 124 -PYEEIPLDD--DFSIDVEDYLR----PN------GGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFG-- 188 (353)
T ss_pred -EEEEeecCC--CCCCCHHHHHh----cC------CEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccC--
Confidence 999999874 57899999863 11 2578889999999999999999999886 99999999995431
Q ss_pred CccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCc
Q 038818 276 CPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRA 354 (486)
Q Consensus 276 ~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~ 354 (486)
........... .-..+..++.|.++.| ..+|+++.. +.... .+........ .+ ....
T Consensus 189 ~~~~~~~~~~~-~~~i~~~S~SK~~~~~GlR~G~~~~~-~~~~~-~l~~~~~~~~-------------~~------~~~~ 246 (353)
T PRK05387 189 GESAIPLIDRY-PNLLVVQTFSKSRSLAGLRVGFAIGH-PELIE-ALNRVKNSFN-------------SY------PLDR 246 (353)
T ss_pred CcchHHHHhhC-CCEEEEEehhHhhcchhhhceeeecC-HHHHH-HHHHhhccCC-------------CC------CcCH
Confidence 11111111111 2246777899998744 457887753 33332 2211100000 00 0122
Q ss_pred hHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHH
Q 038818 355 LKLWLVLRSFG-VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLE 433 (486)
Q Consensus 355 l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~ 433 (486)
+..+++.+.+. .+.+++..++..++++++.+.|+++ ++++. ++..+.+.+...+. + ..++.+
T Consensus 247 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~-------------~--~~~~~~ 309 (353)
T PRK05387 247 LAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEAL-GFEVL-PSKANFVFARHPSH-------------D--AAELAA 309 (353)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-CCcCcEEEEECCCC-------------C--HHHHHH
Confidence 33333333332 3456777888888999999999987 78754 44445554443321 1 245667
Q ss_pred HHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 434 SINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 434 ~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
.+.++|+.+.........+++|+++. +++++++++++|+++..
T Consensus 310 ~l~~~gi~v~~~~~~~~~~~iRis~~----~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 310 KLRERGIIVRHFNKPRIDQFLRITIG----TDEEMEALVDALKEILA 352 (353)
T ss_pred HHHHCCEEEEECCCCCCCCeEEEEeC----CHHHHHHHHHHHHHHhh
Confidence 77777875422111123568999984 45799999999988754
No 162
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.81 E-value=7.5e-18 Score=168.16 Aligned_cols=282 Identities=15% Similarity=0.173 Sum_probs=187.1
Q ss_pred HHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH----HHH
Q 038818 115 ENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK----AAQ 190 (486)
Q Consensus 115 e~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~----a~~ 190 (486)
..++.+.+++++|.+ ..+++++|+.|+..++. ... +++.|+++...|.+... .+.
T Consensus 49 ~~~le~~la~l~g~~---------~~l~~~sG~~al~~~l~-ll~-----------~Gd~Vl~~~~~y~~~~~~~~~~~~ 107 (378)
T TIGR01329 49 RTALESLLAKLDKAD---------RAFAFSSGMAALDVITR-LLN-----------NGDEIIAGDDLYGGTDRLLTQVVP 107 (378)
T ss_pred HHHHHHHHHHHhCCC---------cEEEECCHHHHHHHHHH-HhC-----------CCCEEEEcCCCchHHHHHHHHHHH
Confidence 345567788888874 35777777766544332 211 56778888888877544 455
Q ss_pred HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeecccc
Q 038818 191 IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYA 270 (486)
Q Consensus 191 ~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g 270 (486)
..|+ +++.++.+ |++++++++++++ .+|+++.++|++|.+.|+++|+++|+++|++++||++++
T Consensus 108 ~~G~---~v~~vd~~-------d~~~le~~i~~~t------klv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~ 171 (378)
T TIGR01329 108 RSGV---VVVHVDTT-------DLDKVKAALGPKT------KLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMM 171 (378)
T ss_pred HcCc---EEEEeCCC-------CHHHHHHhcCcCc------eEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCc
Confidence 6788 88888752 7899999887543 489999999999999999999999999999999999996
Q ss_pred chhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccC
Q 038818 271 GSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITL 348 (486)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 348 (486)
.+....+ .. .++|.+..++||++++|.+ .|+++++++....+... +... .
T Consensus 172 ~~~~~~~-l~------~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~----~~~~-----------------~ 223 (378)
T TIGR01329 172 SPLLCNP-LE------LGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYF----LQNS-----------------T 223 (378)
T ss_pred ccccCCh-hh------cCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHH----HHHh-----------------c
Confidence 6543221 11 1789999999999999876 88888877654332211 1000 0
Q ss_pred CCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeE-EecC----------------CCeeEEEEEeecC
Q 038818 349 SRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFE-IVAP----------------RNFAVVCFRVLPS 411 (486)
Q Consensus 349 sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~----------------~~~~~v~f~~~~~ 411 (486)
+........|..++ +.+.+..++++..+++..+.+.|+++|.++ +..| ...++++|.+..
T Consensus 224 G~~~~~~~a~l~~~--~l~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~- 300 (378)
T TIGR01329 224 GSGLAPFDCWLLLR--GIKTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGS- 300 (378)
T ss_pred CCcCCHHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECC-
Confidence 11122334454443 557888899999999999999999988763 3222 124688998832
Q ss_pred CCCCCCCCCccchHHHHHHHHHHHHhcCcE--------EE-eee-----eE-------CC--EeEEEEEecCCCCcHHHH
Q 038818 412 ASGLGDGKANEGANELNRKLLESINASGQL--------YV-SHG-----MV-------AG--IYFIRFAVGATLTEDRHV 468 (486)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~--------~~-~~~-----~~-------~~--~~~lR~~~~~~~tt~~di 468 (486)
.+...++.+.|..-++. .+ .+. .. .| .+.+|+|++- ||+
T Consensus 301 -------------~~~~~~~~~~L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl-----E~~ 362 (378)
T TIGR01329 301 -------------VALSKRLVEATKLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI-----EDV 362 (378)
T ss_pred -------------HHHHHHHHHhCcCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc-----CCH
Confidence 12234555555322211 11 111 00 11 4689999952 378
Q ss_pred HHHHHHHHHHHHHH
Q 038818 469 IAAWKVVQEKLDGI 482 (486)
Q Consensus 469 d~~i~~l~~~~~~l 482 (486)
|.+++.|++.+++.
T Consensus 363 ~dl~~dl~~al~~~ 376 (378)
T TIGR01329 363 DDLISDLDIAFVTA 376 (378)
T ss_pred HHHHHHHHHHHHhc
Confidence 88888888877653
No 163
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.81 E-value=7.6e-17 Score=163.18 Aligned_cols=340 Identities=14% Similarity=0.120 Sum_probs=210.4
Q ss_pred HHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCc-ceEEcCCchHHHHHHHHHHHHHHHHHc
Q 038818 87 AGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTG-GGVIQGTTCEAILCTLAAARDQILNEI 165 (486)
Q Consensus 87 ~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~-~~~~t~ggt~a~~~al~~a~~~~~~~~ 165 (486)
+..+..+.....+.....|....+...+.+.+.+|+.+.+|.+... . ..++|+|+++++..++.+..+
T Consensus 49 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~-----~~~I~it~G~~~al~~~~~~l~~------ 117 (403)
T PRK08636 49 QHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDP-----ETEVVATMGSKEGYVHLVQAITN------ 117 (403)
T ss_pred HHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CCeEEECCChHHHHHHHHHHhCC------
Confidence 3344444443322233456555567789999999999988865331 2 488999999888777666543
Q ss_pred cccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHC-CCccEEEEeecCCcccc
Q 038818 166 GRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQA-GLIPLFLCATVGTTAIT 244 (486)
Q Consensus 166 ~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~-g~~p~~vv~~~gtt~~G 244 (486)
+++.|++...+++.+...++..|+ +++.||++.++++.+|+++|...+++..++ ...+.+++.+.++||||
T Consensus 118 -----~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG 189 (403)
T PRK08636 118 -----PGDVAIVPDPAYPIHSQAFILAGG---NVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTT 189 (403)
T ss_pred -----CCCEEEEcCCCCcchHHHHHhcCC---EEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCC
Confidence 677888999999999999999999 999999864345789999776666544322 22456788888999999
Q ss_pred ccCC---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCC-C--ceeeccccccC-CCCcceEEEeeCchHH
Q 038818 245 TVDP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGA-D--SFSLNAHKWFF-TTLDCCCLWVKNPNAL 317 (486)
Q Consensus 245 ~idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~a-D--si~~~~hK~l~-~p~~~g~~~~~~~~~~ 317 (486)
.+-+ +++|.++|++|++|+++|.+|+........... +..+... | ..+.++.|.++ ...-+|+++. ++...
T Consensus 190 ~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~-~~~li 267 (403)
T PRK08636 190 ATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPS-ILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVG-NKKLV 267 (403)
T ss_pred ccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCC-hhcCCCccccEEEEEecccccCCccceeeeeeC-CHHHH
Confidence 9855 678888999999999999999765321111111 1122221 2 23567999996 5567888765 33333
Q ss_pred HHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEec
Q 038818 318 IKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVA 397 (486)
Q Consensus 318 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 397 (486)
. .+.....+... ..+....... ..++. -..+.++++.+...+..+.+.+.|++. ++++..
T Consensus 268 ~-~~~~~~~~~~~----------------~~~~~~q~~~-~~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~ 327 (403)
T PRK08636 268 G-ALKKIKSWLDY----------------GMFTPIQVAA-TIALD-GDQSCVEEIRETYRKRRDVLIESFANA-GWELQK 327 (403)
T ss_pred H-HHHHHHHHhcc----------------cCChHHHHHH-HHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccC
Confidence 2 22111111100 0000001111 11222 124556677777788888899999886 676553
Q ss_pred CCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHH
Q 038818 398 PRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKV 474 (486)
Q Consensus 398 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~ 474 (486)
+.....+.+++.+.. ...+ ..++.+.+. +.|+.+.++..+. +.+++|+++. .+++++++.++.
T Consensus 328 p~~g~~~~~~l~~~~---------~~~~--~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~~~~r 393 (403)
T PRK08636 328 PRASMFVWAKIPEPA---------RHLG--SLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI---ENENRIRQAARN 393 (403)
T ss_pred CCcceEEEEECCCcc---------CCCC--HHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec---CCHHHHHHHHHH
Confidence 333344444543210 0001 234555544 4676554443332 2579999994 367789999999
Q ss_pred HHHHHHH
Q 038818 475 VQEKLDG 481 (486)
Q Consensus 475 l~~~~~~ 481 (486)
|+++++.
T Consensus 394 l~~~l~~ 400 (403)
T PRK08636 394 IKKFLKE 400 (403)
T ss_pred HHHHHHh
Confidence 9888765
No 164
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.81 E-value=1.4e-17 Score=167.25 Aligned_cols=234 Identities=14% Similarity=0.188 Sum_probs=161.6
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH-
Q 038818 108 SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ- 186 (486)
Q Consensus 108 ~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~- 186 (486)
.|...++| +.+++++|.+.. .++++|+.|+..++.+... +++.|+++...|.+..
T Consensus 64 ~p~~~~Le----~~lA~l~G~~~~---------~~~~sG~~Ai~~~l~~~l~-----------~Gd~Vl~~~~~y~~~~~ 119 (398)
T PRK07504 64 NPTVDMFE----KRMCALEGAEDA---------RATASGMAAVTAAILCQVK-----------AGDHVVAARALFGSCRY 119 (398)
T ss_pred CchHHHHH----HHHHHHhCCCee---------eEecCHHHHHHHHHHHHhC-----------CCCEEEEcCCchhHHHH
Confidence 44444555 567888888653 5677888888766654322 5677888887776543
Q ss_pred ---HHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceE
Q 038818 187 ---KAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWV 263 (486)
Q Consensus 187 ---~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~l 263 (486)
..+...|+ +++.++ .+|+++++++|++.+ .+|+++.++|++|.+-|+++|.++|+++|+++
T Consensus 120 ~~~~~~~~~G~---~v~~vd-------~~d~e~l~~ai~~~t------klV~lesp~NptG~v~dl~~I~~la~~~gi~l 183 (398)
T PRK07504 120 VVETLLPRYGI---ESTLVD-------GLDLDNWEKAVRPNT------KVFFLESPTNPTLEVIDIAAVAKIANQAGAKL 183 (398)
T ss_pred HHHHHHhhcCe---EEEEEC-------CCCHHHHHHhcCcCc------eEEEEECCCCCCcEecCHHHHHHHHHHcCCEE
Confidence 33445677 777774 368999999987543 48999999999999999999999999999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCC
Q 038818 264 HVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYK 342 (486)
Q Consensus 264 hvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 342 (486)
+||++|+.+....+ . . .++|.++.++||+++++. ..|.+++.++..+.+.+. .+..
T Consensus 184 vvD~a~a~~~~~~~-~-~-----~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~---~~~~------------- 240 (398)
T PRK07504 184 VVDNVFATPLFQKP-L-E-----LGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQ---DYFR------------- 240 (398)
T ss_pred EEECCccccccCCc-h-h-----hCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHH---HHHH-------------
Confidence 99999976543221 1 1 168999999999998763 344444444443322111 1111
Q ss_pred CccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeE-EecC-----C-----------CeeEEE
Q 038818 343 DWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFE-IVAP-----R-----------NFAVVC 405 (486)
Q Consensus 343 ~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~-----~-----------~~~~v~ 405 (486)
.++.......+|..++ +.+.+..++++..+++..+.+.|+++|+++ |..| | ..++++
T Consensus 241 ----~~g~~~s~~~A~~~l~--~L~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s 314 (398)
T PRK07504 241 ----HTGPSLSPFNAWTLLK--GLETLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVA 314 (398)
T ss_pred ----HhCCCCCHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEE
Confidence 1122334556676665 557788899999999999999999998875 3322 1 156889
Q ss_pred EEeec
Q 038818 406 FRVLP 410 (486)
Q Consensus 406 f~~~~ 410 (486)
|.+.+
T Consensus 315 ~~~~~ 319 (398)
T PRK07504 315 FELKG 319 (398)
T ss_pred EEeCC
Confidence 98853
No 165
>PRK06855 aminotransferase; Validated
Probab=99.81 E-value=4.9e-17 Score=165.70 Aligned_cols=354 Identities=12% Similarity=0.090 Sum_probs=210.9
Q ss_pred HHHHHHHHHHhhc-CCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHH
Q 038818 86 IAGFLGEMLSSGF-NVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNE 164 (486)
Q Consensus 86 ~~~~~~~~l~~~~-n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~ 164 (486)
+|..+.+.+...+ +.....|....+..++.+.+.+|+.+..|++.+ ..+.++|+|+++++..++. ...
T Consensus 49 ~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~-----~~~I~it~G~~~al~~~~~-l~~----- 117 (433)
T PRK06855 49 IPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQIT-----PDDIIFFNGLGDAIAKIYG-LLR----- 117 (433)
T ss_pred CCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCC-----HhHEEEcCcHHHHHHHHHH-hcC-----
Confidence 3444455444443 223345665666788999999999998776433 1268999999988866653 222
Q ss_pred ccccCCCCeEEEecCCCchHHHHHH-HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccc
Q 038818 165 IGRENISRLVVYGSDQTHSALQKAA-QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAI 243 (486)
Q Consensus 165 ~~~~~~~~~~v~~s~~~H~s~~~a~-~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~ 243 (486)
+++.|++...+++....+. ...|+ +++.+|+++++++.+|+++|+++++... .+.+++++.++|||
T Consensus 118 ------~Gd~Vlv~~P~Y~~~~~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~~~~~~----~~~~i~l~~P~NPT 184 (433)
T PRK06855 118 ------REARVIGPSPAYSTHSSAEAAHAGY---PPVTYRLDPENNWYPDLDDLENKVKYNP----SIAGILLINPDNPT 184 (433)
T ss_pred ------CCCeEEEeCCCCchHHHHHHHhcCC---eEEEEecccccCCCCCHHHHHHHHhcCC----CceEEEEECCCCCC
Confidence 5677888888887755432 34577 8889998764457899999999986321 12357777899999
Q ss_pred cccCC---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCC-ceeeccccccC-CCCcceEEEeeCc---h
Q 038818 244 TTVDP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGAD-SFSLNAHKWFF-TTLDCCCLWVKNP---N 315 (486)
Q Consensus 244 G~idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aD-si~~~~hK~l~-~p~~~g~~~~~~~---~ 315 (486)
|.+-+ +++|+++|++||+|+++|.+|+..............-...-. .+..++.|.++ ...-+|+++..+. .
T Consensus 185 G~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~ 264 (433)
T PRK06855 185 GAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDE 264 (433)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhh
Confidence 99965 677888899999999999999765432111111111111112 45567899997 5567999887321 1
Q ss_pred HHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhc----hHHHHHHHHHHHHHHHHHHHHHhCCC
Q 038818 316 ALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFG----VANLRNFLRSHVRMAQLFQELVGGDN 391 (486)
Q Consensus 316 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g----~~g~~~~~~~~~~~a~~l~~~L~~~~ 391 (486)
.+...+.....+... .. ....+...++...+. .+.+++..+...++.+.+.+.|++++
T Consensus 265 ~~~~~~~~~~~~~~~----------------~~--~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~ 326 (433)
T PRK06855 265 VFKKYINSILNAKMI----------------EV--CSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVP 326 (433)
T ss_pred HHHHHHHHHHHhhcc----------------cc--CCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 111111100000000 00 012233333444442 24566677777888888999998887
Q ss_pred CeEEecCCCeeEEEEEeecCCC-CCCCC--CCccchHH-----------HHHHHHH-HHHhcCcEEEeeeeEC-CEeEEE
Q 038818 392 RFEIVAPRNFAVVCFRVLPSAS-GLGDG--KANEGANE-----------LNRKLLE-SINASGQLYVSHGMVA-GIYFIR 455 (486)
Q Consensus 392 ~~~~~~~~~~~~v~f~~~~~~~-~~~~~--~~~~~~~~-----------~~~~l~~-~l~~~g~~~~~~~~~~-~~~~lR 455 (486)
++.+. +|+.+.+.|--.+... ...+. ....+..+ ...++.. .+.+.|+.++++..+. ....+|
T Consensus 327 ~~~~~-~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~R 405 (433)
T PRK06855 327 GLKVN-RTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFR 405 (433)
T ss_pred Ceecc-CCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceE
Confidence 77653 5666655553222210 00000 00000000 0123333 3456787666555442 234699
Q ss_pred EEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 456 FAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 456 ~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
+++.+ .++++|++.++.|.+++++.++
T Consensus 406 ls~~~--~~~~~i~~~~~~l~~~~~~~~~ 432 (433)
T PRK06855 406 VTLLE--RDEEKFEWIYQTLAEKIEEYLA 432 (433)
T ss_pred EEECC--CcHHHHHHHHHHHHHHHHHHhc
Confidence 99964 4678999999999999987664
No 166
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=1.4e-17 Score=168.12 Aligned_cols=237 Identities=13% Similarity=0.120 Sum_probs=155.1
Q ss_pred HHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH----HHHH
Q 038818 115 ENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ----KAAQ 190 (486)
Q Consensus 115 e~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~----~a~~ 190 (486)
...+.+.++++.|.+ ..+++++|+.|+..++..... +++.|+++...|.+.. +.+.
T Consensus 71 ~~~le~~la~l~g~~---------~~v~fsSG~~Ai~~al~~ll~-----------~Gd~VI~~~~~y~~t~~~~~~~l~ 130 (437)
T PRK05613 71 VEALENRIASLEGGV---------HAVAFASGQAAETAAILNLAG-----------AGDHIVTSPRLYGGTETLFLVTLN 130 (437)
T ss_pred HHHHHHHHHHHhCCC---------eEEEeCCHHHHHHHHHHHhcC-----------CCCEEEECCCccHHHHHHHHHHHH
Confidence 344456688888874 357777777888766654421 5678888988898763 4456
Q ss_pred HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeecccc
Q 038818 191 IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYA 270 (486)
Q Consensus 191 ~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g 270 (486)
..|+ +++.++ ++ .|+++++++|+++++ +|++...+|++|.+.||++|+++|+++|+.+|||++++
T Consensus 131 ~~Gi---~v~~vd-~~-----~d~e~l~~~l~~~tk------~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a 195 (437)
T PRK05613 131 RLGI---EVTFVE-NP-----DDPESWQAAVQPNTK------AFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIA 195 (437)
T ss_pred hcCe---EEEEEC-CC-----CCHHHHHHhCCccCe------EEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCc
Confidence 7788 888887 32 289999999876543 67778899999999999999999999999999999997
Q ss_pred chhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCch-HHHHHh--cCCcccccCccCCCCC--ccCCC--
Q 038818 271 GSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPN-ALIKAL--STNPEFLRNKASDSKQ--VVDYK-- 342 (486)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~-~~~~~~--~~~~~y~~~~~~~~~~--~~~~~-- 342 (486)
.+....+ .. .++|.+++++||+++++. +.|.+++.+.. ...... ....+++......... ..++.
T Consensus 196 ~g~~~~p-~~------~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (437)
T PRK05613 196 TAALVRP-LE------LGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAP 268 (437)
T ss_pred cccccCh-HH------hCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchH
Confidence 6554322 11 179999999999998763 34555553321 100000 0000001000000000 00000
Q ss_pred --------CccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Q 038818 343 --------DWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEI 395 (486)
Q Consensus 343 --------~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 395 (486)
.+....|-...+..+|+.++ |.+.+..++++..++|..+++.|+++|.++-
T Consensus 269 ~~~~~~~~~~~~~~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~ 327 (437)
T PRK05613 269 AFGLKARAGLLRDTGATLSPFNAWVTAQ--GLDTLSLRLERHNENAIKVAEFLNNHEKVAK 327 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHcCCCcce
Confidence 01111233345566676665 6688899999999999999999999998753
No 167
>PRK10534 L-threonine aldolase; Provisional
Probab=99.81 E-value=6.3e-18 Score=166.82 Aligned_cols=297 Identities=17% Similarity=0.084 Sum_probs=178.6
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCc
Q 038818 103 FNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTH 182 (486)
Q Consensus 103 ~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 182 (486)
..|...|...++|+. +++++|.+. .++++||+++++.++.+... ++..|+++...|
T Consensus 28 ~~Y~~~~~~~~L~~~----la~~~g~~~---------~~v~~~g~~a~~~~l~~~~~-----------~gd~vi~~~~~~ 83 (333)
T PRK10534 28 DVYGDDPTVNALQDY----AAELSGKEA---------ALFLPTGTQANLVALLSHCE-----------RGEEYIVGQAAH 83 (333)
T ss_pred cccCCCHHHHHHHHH----HHHHhCCCe---------EEEeCchHHHHHHHHHHhcC-----------CCCeeEEechhh
Confidence 345556666677665 566778754 47888899998887776532 455666777777
Q ss_pred hHHHHH--HHHcC-CCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchH---HHHHH
Q 038818 183 SALQKA--AQIAG-IDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGP---LCDIA 256 (486)
Q Consensus 183 ~s~~~a--~~~~G-~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~---I~~i~ 256 (486)
.+...+ +...| + .++.+++++ ++.+|+++|++++.+....+..+.+|+++. +++|.+.|.++ |.++|
T Consensus 84 ~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~~~~lv~l~n--p~~G~v~~~~~l~~i~~~~ 156 (333)
T PRK10534 84 NYLYEAGGAAVLGSI---QPQPIDAAA--DGTLPLDKVAAKIKPDDIHFARTRLLSLEN--THNGKVLPREYLKQAWEFT 156 (333)
T ss_pred hhHhcCCchHHhcCc---eEEeecCCC--CCCCCHHHHHHhhcccCcCcccceEEEEec--CCCCeecCHHHHHHHHHHH
Confidence 543332 34444 4 667777764 679999999999865321111234566654 34599877655 56788
Q ss_pred HHhCceEEeeccccchhc-c-CccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCC
Q 038818 257 KRYSIWVHVDAAYAGSAC-I-CPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASD 334 (486)
Q Consensus 257 ~~~g~~lhvD~a~g~~~~-~-~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~ 334 (486)
++|++|+++|+||..... . ....... ....|.++++++|.++.+ .|.+++.+++...........+.
T Consensus 157 ~~~~~~lvvDEA~~~~~~~~~~~~~~~~---~~~~~~~~~s~SK~~~~~--~G~~~~~~~~~i~~~~~~~~~~~------ 225 (333)
T PRK10534 157 RERNLALHVDGARIFNAVVAYGCELKEI---TQYCDSFTICLSKGLGTP--VGSLLVGNRDYIKRARRWRKMTG------ 225 (333)
T ss_pred HHcCCeEEeeHHHHHHHHHHcCCCHHHH---HhcCCEEEEEeEcCCCCc--ccceEEcCHHHHHHHHHHHHHhC------
Confidence 999999999999752111 0 1111111 123576777899988876 56544556655432221111000
Q ss_pred CCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCC
Q 038818 335 SKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASG 414 (486)
Q Consensus 335 ~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~ 414 (486)
.+-...++.+.+++..+ +...+.+++..+.++++.+.|+++ ++++. ++..+.+.+++.+.
T Consensus 226 -------------~~~~~~~~~~a~~~~~l--~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~~nfv~~~~~~~--- 285 (333)
T PRK10534 226 -------------GGMRQAGILAAAGLYAL--KHNVARLQEDHDNAAWLAEQLREA-GADVM-RQDTNMLFVRVGEE--- 285 (333)
T ss_pred -------------CchhhHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHhC-CCccC-CCCceEEEEECCch---
Confidence 00001112222233322 222344555566778999999987 78865 45677777666421
Q ss_pred CCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 415 LGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 415 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
...++.+.|.++|+.+ .+. ..+|++. +...|+++++++++.|++.+.
T Consensus 286 ------------~~~~~~~~l~~~gi~v-~~~-----~~~rl~~-~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 286 ------------QAAALGEYMRERNVLI-NAS-----PIVRLVT-HLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred ------------hHHHHHHHHHHcCeee-cCC-----ceEEEEE-EeCCCHHHHHHHHHHHHHHhc
Confidence 1345667777888754 332 2579987 456789999999999987653
No 168
>PRK07683 aminotransferase A; Validated
Probab=99.80 E-value=3.5e-17 Score=164.75 Aligned_cols=331 Identities=12% Similarity=0.087 Sum_probs=211.1
Q ss_pred HHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccc
Q 038818 88 GFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGR 167 (486)
Q Consensus 88 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 167 (486)
..+.+.+...+..+...|...+...++++.+.+|+.+.+|.+.+. ...+++|+|+++|+..++.+...
T Consensus 44 ~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~----~~~I~~t~G~~~al~~~~~~l~~-------- 111 (387)
T PRK07683 44 SHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSP----ESEIIVTIGASEAIDIAFRTILE-------- 111 (387)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCChHHHHHHHHHHhCC--------
Confidence 345556665555444556656667889999999998877764321 11689999999998776655432
Q ss_pred cCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC
Q 038818 168 ENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD 247 (486)
Q Consensus 168 ~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id 247 (486)
+++.|+++...+.....+++.+|+ +++.+|.++ +++.+|++++++.+.+. +.+|+++.++|+||.+-
T Consensus 112 ---~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~-~~~~~~~~~l~~~~~~~------~~~i~i~~p~NPtG~~~ 178 (387)
T PRK07683 112 ---PGTEVILPAPIYPGYEPIIRLCGA---KPVFIDTRS-TGFRLTAEALENAITEK------TRCVVLPYPSNPTGVTL 178 (387)
T ss_pred ---CCCEEEEcCCCccchHHHHHHcCC---EEEEeecCc-ccCCCCHHHHHHhcCcC------ceEEEEeCCCCCCCcCC
Confidence 566788888888888888999999 999999875 35788999999887643 34678889999999984
Q ss_pred ---CchHHHHHHHHhCceEEeeccccchhccCccchhhhc--CCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHh
Q 038818 248 ---PLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFID--GIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKAL 321 (486)
Q Consensus 248 ---pl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~--~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~ 321 (486)
++++|+++|+++|+++++|++|..+... +....... +...-..+..++.|.++.| .-+|+++...+ ......
T Consensus 179 s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~-l~~~~~ 256 (387)
T PRK07683 179 SKEELQDIADVLKDKNIFVLSDEIYSELVYE-QPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSY-LAKHIL 256 (387)
T ss_pred CHHHHHHHHHHHHHcCeEEEEecccccceeC-CCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCHH-HHHHHH
Confidence 4889999999999999999999765332 11111111 1112235567789999844 45788776543 322211
Q ss_pred cCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC
Q 038818 322 STNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR 399 (486)
Q Consensus 322 ~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 399 (486)
.. ..|.. .+ ...+...++...+ +...+++..++..+.++++.+.|++. ++.+. ++
T Consensus 257 ~~-~~~~~-----------------~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~~ 313 (387)
T PRK07683 257 KV-HQYNV-----------------TC---ASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISM-GLDVE-KP 313 (387)
T ss_pred HH-HHhcc-----------------CC---CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-CCccc-CC
Confidence 11 11110 00 0112222222222 44556666777788888999999886 66654 45
Q ss_pred CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHH-HHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 400 NFAVVCFRVLPSASGLGDGKANEGANELNRKLLES-INASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 400 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
..+.+.+...+.. .. + ...+... +.+.|+.+.++..+. +..++|++++. +++++.+.++.|.
T Consensus 314 ~~~~~~~~~~~~~--------~~--~--~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~---~~~~~~~al~~l~ 378 (387)
T PRK07683 314 TGAFYLFPSIGHF--------TM--S--SFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAY---SIETLKEGLDRLE 378 (387)
T ss_pred CeeEEEEEecccC--------CC--C--HHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecC---CHHHHHHHHHHHH
Confidence 5565555432210 00 1 1233333 345677544443332 35799999963 5779999999998
Q ss_pred HHHHHHh
Q 038818 477 EKLDGIL 483 (486)
Q Consensus 477 ~~~~~l~ 483 (486)
+++++-.
T Consensus 379 ~~l~~~~ 385 (387)
T PRK07683 379 AFLQQKA 385 (387)
T ss_pred HHHHhhc
Confidence 8776543
No 169
>PLN02509 cystathionine beta-lyase
Probab=99.80 E-value=8.8e-18 Score=169.96 Aligned_cols=216 Identities=15% Similarity=0.190 Sum_probs=154.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH----H
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK----A 188 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~----a 188 (486)
...+++.++++++.|.+ ..+++++|+.++ .++..... +++.|+++...|.+..+ .
T Consensus 133 pt~~aLE~~lA~leg~e---------~ai~~~SG~aAi-~~il~ll~-----------~GD~VI~~~~~y~~t~~ll~~~ 191 (464)
T PLN02509 133 PTRDALESLLAKLDKAD---------RAFCFTSGMAAL-SAVTHLIK-----------NGEEIVAGDDVYGGSDRLLSQV 191 (464)
T ss_pred HHHHHHHHHHHHHhCCC---------EEEEeCcHHHHH-HHHHHHhC-----------CCCEEEEcCCchhhHHHHHHHH
Confidence 34566677888888754 356777777554 33333211 66778889888887653 3
Q ss_pred HHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeecc
Q 038818 189 AQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAA 268 (486)
Q Consensus 189 ~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a 268 (486)
+...|+ +++.++. .|++++++++++++ .+|+++.++|++|.+.|+++|+++|+++|++++||+|
T Consensus 192 l~~~G~---~v~~vd~-------~d~e~l~~ai~~~T------klV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A 255 (464)
T PLN02509 192 VPRSGV---VVKRVNT-------TNLDEVAAAIGPQT------KLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNS 255 (464)
T ss_pred HHHCCe---EEEEeCC-------CCHHHHHHhCCcCC------eEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECC
Confidence 456687 7777753 37889998886543 4789999999999999999999999999999999999
Q ss_pred ccchhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccc
Q 038818 269 YAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQI 346 (486)
Q Consensus 269 ~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 346 (486)
|+.+....+ .. .++|.++.+++||+++|.+ +|+++++++....+... +..
T Consensus 256 ~a~~~~~~p-l~------~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~-----~~~---------------- 307 (464)
T PLN02509 256 IMSPVLSRP-LE------LGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYF-----LQN---------------- 307 (464)
T ss_pred ccccccCCh-hh------cCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHH-----HHH----------------
Confidence 977654322 11 2799999999999998876 77777776643322110 000
Q ss_pred cCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Q 038818 347 TLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEI 395 (486)
Q Consensus 347 ~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 395 (486)
..+.......+|+.++ |.+.+..++++..++++++.+.|+++|.++-
T Consensus 308 ~~g~~l~p~~A~l~lr--~L~tL~~R~~r~~~nA~~la~~L~~~p~V~~ 354 (464)
T PLN02509 308 SEGSGLAPFDCWLCLR--GIKTMALRIEKQQENARKIAMYLSSHPRVKK 354 (464)
T ss_pred hcCCCcCHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHhcCCCccE
Confidence 0011124455666665 4578889999999999999999999998853
No 170
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.80 E-value=1.4e-17 Score=166.29 Aligned_cols=284 Identities=15% Similarity=0.140 Sum_probs=179.3
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEE-cCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCC
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVI-QGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGI 194 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~-t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~ 194 (486)
.++++.+++.+|++++ ..++ ++|+++++..++.+... ++..|+++...+..+...++..|+
T Consensus 72 ~~lr~~ia~~~~~~~~-------~i~~~~~Ga~~~i~~~~~~~~~-----------~gd~vlv~~p~y~~~~~~~~~~g~ 133 (361)
T PRK00950 72 PELREALSKYTGVPVE-------NIIVGGDGMDEVIDTLMRTFID-----------PGDEVIIPTPTFSYYEISAKAHGA 133 (361)
T ss_pred HHHHHHHHHHhCCCHH-------HEEEeCCCHHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHHHcCC
Confidence 4455667777888664 5677 55656655444443321 566788887777777778889999
Q ss_pred CCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhc
Q 038818 195 DPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSAC 274 (486)
Q Consensus 195 g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~ 274 (486)
+++.+|.+. ++.+|+++|++++.+. +.+|+++.++|++|.+-|+++|.++|+++|+++++|++|+.+.
T Consensus 134 ---~~~~~~~~~--~~~~~~~~l~~~~~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~- 201 (361)
T PRK00950 134 ---KPVYAKREE--DFSLDVDSVLNAITEK------TKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFA- 201 (361)
T ss_pred ---EEEEeecCC--CCCcCHHHHHHHhccC------CCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhC-
Confidence 999998654 5789999999988542 3367778999999999999999999999999999999997543
Q ss_pred cCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCC
Q 038818 275 ICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFR 353 (486)
Q Consensus 275 ~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~ 353 (486)
............. -.+..++.|.++.| ..+|+++..++ ...........+ . ..
T Consensus 202 -~~~~~~~~~~~~~-vi~~~S~SK~~g~~GlRiG~~~~~~~-~~~~~~~~~~~~-----------------~------~~ 255 (361)
T PRK00950 202 -EYDYTPLALEYDN-LIIGRTFSKVFGLAGLRIGYGFVPEW-LIDYYMRAKTPF-----------------S------LT 255 (361)
T ss_pred -ccchHHHHHhcCC-EEEEEeehHhhcCchhhcchhcCCHH-HHHHHHHhcCCC-----------------C------CC
Confidence 1112222221111 13445789998754 34677765432 222111111100 0 12
Q ss_pred chHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHH
Q 038818 354 ALKLWLVLRSFG-VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLL 432 (486)
Q Consensus 354 ~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~ 432 (486)
.+....+...+. .+.+++..++..++++++.+.|. +++. ++..+.+.+.+.+. ...++.
T Consensus 256 ~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~----~~~~-~~~~~~i~~~~~~~---------------~~~~~~ 315 (361)
T PRK00950 256 RLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP----FKVY-PSEANFVLVDVTPM---------------TAKEFC 315 (361)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC----eeEC-CCcceEEEEECCCC---------------CHHHHH
Confidence 233334444442 23456666666666666766664 4443 44556666666221 134567
Q ss_pred HHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 433 ESINASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 433 ~~l~~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
+.|.++|+.+..+..+. +..++|+++. +.+++++++++|++++
T Consensus 316 ~~l~~~gv~v~~~~~f~~~~~~~lRis~~----~~~~~~~l~~~L~~il 360 (361)
T PRK00950 316 EELLKRGVIVRDCTSFRGLGDYYIRVSIG----TFEENERFLEILKEIV 360 (361)
T ss_pred HHHHHCCEEEeeCCccCCCCCCeEEEECC----CHHHHHHHHHHHHHHh
Confidence 77777787544433332 3568999984 4569999999998864
No 171
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.80 E-value=4.4e-18 Score=168.90 Aligned_cols=284 Identities=12% Similarity=0.100 Sum_probs=188.7
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCC-CeEEEecCCCchHHHHHHHHcCC
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENIS-RLVVYGSDQTHSALQKAAQIAGI 194 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~-~~~v~~s~~~H~s~~~a~~~~G~ 194 (486)
.++++++++.+|++.+ ++++|+|+++++..++.+... + +..|+++..+|......++..|+
T Consensus 60 ~~l~~~~a~~~g~~~~-------~I~~~~Gs~e~i~~~~~~~~~-----------~g~~~vli~~P~y~~y~~~~~~~G~ 121 (351)
T PRK01688 60 KAVIENYAAYAGVKPE-------QVLVSRGADEGIELLIRAFCE-----------PGKDAILYCPPTYGMYSVSAETIGV 121 (351)
T ss_pred HHHHHHHHHHhCCCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCCEEEEcCCCHHHHHHHHHHcCC
Confidence 4677889999999776 789999999988766655432 3 36788888999999999999999
Q ss_pred CCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh--CceEEeeccccch
Q 038818 195 DPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY--SIWVHVDAAYAGS 272 (486)
Q Consensus 195 g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~--g~~lhvD~a~g~~ 272 (486)
+++.+|.++ ++.+|++++++++. . +.+|+++.++|+||.+-+.+++.++++.. +.++++|+||.-+
T Consensus 122 ---~~~~v~~~~--~~~~d~~~l~~~~~-~------~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f 189 (351)
T PRK01688 122 ---EIRTVPTLD--NWQLDLPAIADNLD-G------VKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEF 189 (351)
T ss_pred ---EEEEeecCC--CCCCCHHHHHHhcc-C------CcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhc
Confidence 999999875 57999999998873 2 23788889999999998877777776532 6899999999654
Q ss_pred hccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC
Q 038818 273 ACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR 351 (486)
Q Consensus 273 ~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~ 351 (486)
.. .+.....+...+. -.+.-++.|+++.| ..+|.++.. ++..........+|-
T Consensus 190 ~~-~~s~~~~~~~~~n-~iv~rSfSK~~glaGlRiGy~i~~-~~~i~~l~~~~~~~~----------------------- 243 (351)
T PRK01688 190 CP-QASLAGWLAEYPH-LVILRTLSKAFALAGLRCGFTLAN-EEVINLLLKVIAPYP----------------------- 243 (351)
T ss_pred CC-CCChHHHHhhCCC-EEEEecchHhhcCHHHHHhHHhCC-HHHHHHHHhccCCCC-----------------------
Confidence 31 1111111111111 14566789988743 446777654 333322211111110
Q ss_pred CCchHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHH
Q 038818 352 FRALKLWLVLRSF---GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELN 428 (486)
Q Consensus 352 ~~~l~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~ 428 (486)
...+...++...+ +.+.+++.++...+.++++.+.|+++++++.+.++..+.+.+++.+ .
T Consensus 244 v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~~-----------------~ 306 (351)
T PRK01688 244 LSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFTA-----------------S 306 (351)
T ss_pred CCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcCC-----------------H
Confidence 0111122222222 2345667777777888999999998877754556666666665531 2
Q ss_pred HHHHHHHHhcCcEEEeeeeECC-EeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 429 RKLLESINASGQLYVSHGMVAG-IYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 429 ~~l~~~l~~~g~~~~~~~~~~~-~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
..+.+.|.++|+.+.......+ .+++|+++. +++++++++++|+
T Consensus 307 ~~l~~~L~~~gi~vr~~~~~~~~~~~iRis~~----~~~e~~~l~~al~ 351 (351)
T PRK01688 307 SAVFKSLWDQGIILRDQNKQPGLSNCLRITIG----TREECQRVIDALR 351 (351)
T ss_pred HHHHHHHHHCCeEEEECCCcCCCCCeEEEeCC----CHHHHHHHHHhhC
Confidence 4567777788976544332222 568999985 4679999999873
No 172
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.80 E-value=2.1e-17 Score=168.29 Aligned_cols=320 Identities=13% Similarity=0.124 Sum_probs=204.2
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHH
Q 038818 110 AATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAA 189 (486)
Q Consensus 110 ~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~ 189 (486)
+...+.+.+.+++.+.+|..... ....+++|+|+++++...+.+..+ +++.|+++.+.+..+...+
T Consensus 96 G~~~LR~aiA~~l~~~~~~~~~v---~p~~Ivit~G~t~al~~l~~~l~~-----------pGD~Vlv~~P~Y~~f~~~~ 161 (447)
T PLN02607 96 GLKSFRQAMASFMEQIRGGKARF---DPDRIVLTAGATAANELLTFILAD-----------PGDALLVPTPYYPGFDRDL 161 (447)
T ss_pred chHHHHHHHHHHHHHhcCCCCCc---CHHHeEEcCChHHHHHHHHHHhCC-----------CCCEEEEcCCCCcchHHHH
Confidence 45678888889998887731110 012689999999988665554433 6778888988888887776
Q ss_pred H-HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHHHhCceEEe
Q 038818 190 Q-IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAKRYSIWVHV 265 (486)
Q Consensus 190 ~-~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~~~g~~lhv 265 (486)
. ..|+ +++.|++++++++.+|++++++++++..+.|..+.+|+++.++||+|.+-+ +++|.++|++||+++++
T Consensus 162 ~~~~g~---~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~ 238 (447)
T PLN02607 162 RWRTGV---KIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVS 238 (447)
T ss_pred HhcCCc---EEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEE
Confidence 6 4688 999999876556789999999999887777777778888999999999865 78889999999999999
Q ss_pred eccccchhccCccchhh---hcCC------CCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCC
Q 038818 266 DAAYAGSACICPEFRHF---IDGI------EGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDS 335 (486)
Q Consensus 266 D~a~g~~~~~~~~~~~~---~~~~------~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~ 335 (486)
|.+|+...+..+.+... ...+ +.+ .+..+..|.++ ...-+|+++..++.... .......|..
T Consensus 239 DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v-~vi~s~SK~fg~~GlRvG~ivs~n~~l~~-~~~~~~~~~~------ 310 (447)
T PLN02607 239 DEIYSGSVFSASEFVSVAEIVEARGYKGVAERV-HIVYSLSKDLGLPGFRVGTIYSYNDKVVT-TARRMSSFTL------ 310 (447)
T ss_pred eccccccccCCCCcccHHHHHhhcCCCCCcCcE-EEEEcchhcCCCCcceEEEEEEcCHHHHH-HHHHHhhcCC------
Confidence 99997654322222211 1111 112 34578899987 55568988876554432 2211111100
Q ss_pred CCccCCCCccccCCCCCCchHHHHHHHHhch-----HHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEE-Eee
Q 038818 336 KQVVDYKDWQITLSRRFRALKLWLVLRSFGV-----ANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCF-RVL 409 (486)
Q Consensus 336 ~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~-----~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f-~~~ 409 (486)
...+...+....+.. ..+.+..++..+..+.+.+.|++. ++++. ++..+.++| ++.
T Consensus 311 ----------------~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~-~~~ag~fvw~~L~ 372 (447)
T PLN02607 311 ----------------VSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIECL-KGNAGLFCWMNLS 372 (447)
T ss_pred ----------------CCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcc-cCCeeEEEEEEch
Confidence 011222222233322 223445555666777888888876 67654 445455444 443
Q ss_pred cCCCCCCCCCCccchHHHHHHHHHHHHh-cCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 410 PSASGLGDGKANEGANELNRKLLESINA-SGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
... . .. ..+...++.+++.+ .|+.+.++..+. ..+++|+++.+ .++++++..++.|.+++++-
T Consensus 373 ~~~-~------~~-~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~--~~~~~l~~gl~Ri~~~l~~~ 438 (447)
T PLN02607 373 PLL-E------TP-TREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFAN--MSEDTLEVALKRIHRFMDRR 438 (447)
T ss_pred Hhh-c------CC-CchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEecc--CCHHHHHHHHHHHHHHHHHH
Confidence 210 0 00 01112356666655 576544333332 36899999964 35779999999999887643
No 173
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.80 E-value=2.8e-17 Score=164.99 Aligned_cols=229 Identities=19% Similarity=0.201 Sum_probs=159.7
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH----HHHHHHH
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA----LQKAAQI 191 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~a~~~ 191 (486)
.++.+.++++.|.+ ..+++++|++|+..++.+... +++.|+++...|.. +...+..
T Consensus 63 ~~Le~~lA~l~g~~---------~~v~~~sG~~Ai~~~l~all~-----------pGD~Vvv~~p~Y~~t~~~~~~~~~~ 122 (405)
T PRK08776 63 DLLGEALAELEGGA---------GGVITATGMGAINLVLNALLQ-----------PGDTLVVPHDAYGGSWRLFNALAKK 122 (405)
T ss_pred HHHHHHHHHHhCCC---------ceEEEcCHHHHHHHHHHHHhC-----------CCCEEEEccCCchHHHHHHHHHHHh
Confidence 33446688888864 357888888877666554422 56677778777765 3334455
Q ss_pred cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccc
Q 038818 192 AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAG 271 (486)
Q Consensus 192 ~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~ 271 (486)
.|+ +++.++. .|+++|++++++. +.+|+++.++|++|.+.|+++|+++|+++|++++||++|+.
T Consensus 123 ~g~---~v~~v~~-------~d~~~l~~~i~~~------tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~ 186 (405)
T PRK08776 123 GHF---ALITADL-------TDPRSLADALAQS------PKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLS 186 (405)
T ss_pred cCc---EEEEECC-------CCHHHHHHhcCcC------CeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcc
Confidence 566 6776653 3889999888653 34788899999999999999999999999999999999976
Q ss_pred hhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCC
Q 038818 272 SACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLS 349 (486)
Q Consensus 272 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~s 349 (486)
+....+ .. .++|.+..++||++++|.+ +|++++++++...+... ...+ .+
T Consensus 187 ~~~~~p-l~------~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~-~~~~--------------------~g 238 (405)
T PRK08776 187 PALQKP-LE------FGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVW-WANA--------------------LG 238 (405)
T ss_pred cccCCc-cc------ccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHH-HHHh--------------------cC
Confidence 432211 11 2789999999999998854 57776766654332211 0000 01
Q ss_pred CCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe-cC----------------CCeeEEEEEeec
Q 038818 350 RRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIV-AP----------------RNFAVVCFRVLP 410 (486)
Q Consensus 350 r~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~----------------~~~~~v~f~~~~ 410 (486)
-....+..|+.++ |.+.++.++++..+++..+.+.|+++|.++-+ .| -..++++|.+..
T Consensus 239 ~~~s~~~a~l~~~--gl~tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 314 (405)
T PRK08776 239 LTGSPFDAFLTLR--GLRTLDARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEG 314 (405)
T ss_pred CCCCHHHHHHHHh--hhCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcC
Confidence 1124566676664 56888999999999999999999999887533 22 124588888863
No 174
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.80 E-value=5.2e-17 Score=163.85 Aligned_cols=330 Identities=13% Similarity=0.049 Sum_probs=202.9
Q ss_pred HHHHHHHHHhhcCC---CccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHH
Q 038818 87 AGFLGEMLSSGFNV---VGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILN 163 (486)
Q Consensus 87 ~~~~~~~l~~~~n~---~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~ 163 (486)
+..+.+.+...++. +...|........+.+.+.+++.+.++..-. ....++|+|+++++..++.....
T Consensus 48 ~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~-----~~~i~~t~G~~~al~~~~~~l~~---- 118 (394)
T PRK06836 48 PAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLT-----ADHIVMTCGAAGALNVALKAILN---- 118 (394)
T ss_pred CHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCC-----cCcEEEeCChHHHHHHHHHHhcC----
Confidence 44455655554432 1334544455677888888888877654321 12688999999888766655432
Q ss_pred HccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccc
Q 038818 164 EIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAI 243 (486)
Q Consensus 164 ~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~ 243 (486)
+++.|+++..++..+...++..|+ +++.+|++++ ++.+|+++|++++++. +.+|+++.++|++
T Consensus 119 -------~gd~Vli~~p~~~~~~~~~~~~g~---~v~~v~~~~~-~~~~d~~~l~~~~~~~------~~~v~~~~p~NPt 181 (394)
T PRK06836 119 -------PGDEVIVFAPYFVEYRFYVDNHGG---KLVVVPTDTD-TFQPDLDALEAAITPK------TKAVIINSPNNPT 181 (394)
T ss_pred -------CCCEEEEcCCCCccHHHHHHHcCC---EEEEEecCCc-cCcCCHHHHHhhcCcC------ceEEEEeCCCCCC
Confidence 566788888899888888999999 9999999863 4789999999998654 3467788899999
Q ss_pred cccCC---chHHHHHHHH------hCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccC-CCCcceEEEeeC
Q 038818 244 TTVDP---LGPLCDIAKR------YSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKN 313 (486)
Q Consensus 244 G~idp---l~~I~~i~~~------~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~ 313 (486)
|.+-| +++|+++|++ ||+++++|.+|................. .-..+..++.|.++ ....+|+++..+
T Consensus 182 G~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~i~~~S~SK~~~~pGlRiG~~~~~~ 260 (394)
T PRK06836 182 GVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYY-DNSIVVYSFSKSLSLPGERIGYIAVNP 260 (394)
T ss_pred CcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHcc-CcEEEEecchhhccCcceeeEEEecCH
Confidence 99876 6677778898 8999999999976432111111111111 12356677899998 445788888764
Q ss_pred chHH-HHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 038818 314 PNAL-IKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNR 392 (486)
Q Consensus 314 ~~~~-~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~ 392 (486)
.... ........ ..... .+.-....+...+..+.+.. +. ..+...+..+.+.+.|+++ +
T Consensus 261 ~~~~~~~~~~~~~-~~~~~---------------~~~~~~~~~~q~~~~~~l~~-~~--~~~~~~~~r~~l~~~L~~~-g 320 (394)
T PRK06836 261 EMEDADDLVAALV-FANRI---------------LGFVNAPALMQRVVAKCLDA-TV--DVSIYKRNRDLLYDGLTEL-G 320 (394)
T ss_pred HHhhhHHHHHHHH-HHhhc---------------cccccCCHHHHHHHHHHhCC-hH--HHHHHHHHHHHHHHHHHhC-C
Confidence 3210 00000000 00000 00000112222222222322 21 2344556677788888887 6
Q ss_pred eEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHH
Q 038818 393 FEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAW 472 (486)
Q Consensus 393 ~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i 472 (486)
+++. ++..+.+.|.-.+.. + ..++.+.+.+.|+.+..+..+...+++|++++ .+++++++.+
T Consensus 321 ~~~~-~~~gg~~~~~~~~~~------------~--~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~---~~~~~~~~~i 382 (394)
T PRK06836 321 FECV-KPQGAFYLFPKSPEE------------D--DVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYC---VDTETIERSL 382 (394)
T ss_pred CEee-cCCceEEEEEeCCCC------------C--HHHHHHHHHhCCEEEECchhcCCCCeEEEEec---CCHHHHHHHH
Confidence 7765 444444444322211 1 23455666777886555444434578999995 3577999999
Q ss_pred HHHHHHHHH
Q 038818 473 KVVQEKLDG 481 (486)
Q Consensus 473 ~~l~~~~~~ 481 (486)
+.|++++++
T Consensus 383 ~~l~~~l~~ 391 (394)
T PRK06836 383 PAFEKLAKE 391 (394)
T ss_pred HHHHHHHHH
Confidence 999988764
No 175
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.80 E-value=3.8e-17 Score=164.71 Aligned_cols=327 Identities=8% Similarity=-0.003 Sum_probs=203.8
Q ss_pred HHHHHHHhhcC-CCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCc-ceEEcCCchHHHHHHHHHHHHHHHHHcc
Q 038818 89 FLGEMLSSGFN-VVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTG-GGVIQGTTCEAILCTLAAARDQILNEIG 166 (486)
Q Consensus 89 ~~~~~l~~~~n-~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~-~~~~t~ggt~a~~~al~~a~~~~~~~~~ 166 (486)
.+.+.+...+. .....|...++..++.+.+.+|+.+..|.+.+. . .+++|+|+++++..++.+...
T Consensus 47 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-----~~~I~it~Gs~~al~~~~~~l~~------- 114 (388)
T PRK07366 47 HALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDP-----ETEVLPLIGSQEGTAHLPLAVLN------- 114 (388)
T ss_pred HHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCC-----cCeEEECCCcHHHHHHHHHHhCC-------
Confidence 34444444442 223446555566788889999998888864321 2 478899999888766665443
Q ss_pred ccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 167 RENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 167 ~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
+++.|++...+++.....++..|+ +++.+|+++++.+.+|++++++.+.+. +.+++++.++||||.+
T Consensus 115 ----~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~p~NPTG~~ 181 (388)
T PRK07366 115 ----PGDFALLLDPGYPSHAGGVYLAGG---QIYPMPLRAENDFLPVFADIPTEVLAQ------ARLMVLSYPHNPTTAI 181 (388)
T ss_pred ----CCCEEEEcCCCCcchHHHHHhcCC---EEEEEECCCccCCCCCHHHHHHhhccc------ceEEEEeCCCCCCCcc
Confidence 677788898999999999999999 999999986555788999998776543 3467777899999998
Q ss_pred CC---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCC-CC--ceeeccccccC-CCCcceEEEeeCchHHHH
Q 038818 247 DP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEG-AD--SFSLNAHKWFF-TTLDCCCLWVKNPNALIK 319 (486)
Q Consensus 247 dp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~-aD--si~~~~hK~l~-~p~~~g~~~~~~~~~~~~ 319 (486)
-+ +++|+++|++||+|+++|.+|.-+..........+..+.. -+ .+..++.|.++ ...-+|+++. +++.+..
T Consensus 182 ~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~-~~~li~~ 260 (388)
T PRK07366 182 APLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIG-NAQLIQA 260 (388)
T ss_pred CCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcC-CHHHHHH
Confidence 55 6677889999999999999997654311110111111111 12 34568899996 4456887765 3433332
Q ss_pred HhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEec
Q 038818 320 ALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVA 397 (486)
Q Consensus 320 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 397 (486)
.......+-. + ........++..+ ..+.+++..+...+..+++.+.|+++ ++.+..
T Consensus 261 l~~~~~~~~~-------------------~--~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~~~~ 318 (388)
T PRK07366 261 LRQVKAVVDF-------------------N--QYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQI-GWPVPL 318 (388)
T ss_pred HHHHHhhccc-------------------C--CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccC
Confidence 2111110000 0 0011111222222 24567777888888888999999887 666543
Q ss_pred CCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHH
Q 038818 398 PRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKV 474 (486)
Q Consensus 398 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~ 474 (486)
+.....+.+.+.+.. +....++.+.+. +.|+.+..+..+. +.+++|+++.. +++++++.++.
T Consensus 319 p~~g~f~~~~~~~~~------------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~---~~~~l~~~l~r 383 (388)
T PRK07366 319 PEATMYVWAKLPEPW------------QGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVH---DPDILEEAVER 383 (388)
T ss_pred CCeeEEEEEECCccc------------CCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecC---CHHHHHHHHHH
Confidence 433334444443210 000234555553 5677555444333 24799999953 46789998888
Q ss_pred HHHH
Q 038818 475 VQEK 478 (486)
Q Consensus 475 l~~~ 478 (486)
|.++
T Consensus 384 l~~~ 387 (388)
T PRK07366 384 IAAF 387 (388)
T ss_pred HHHh
Confidence 8764
No 176
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.80 E-value=4.1e-17 Score=164.81 Aligned_cols=328 Identities=12% Similarity=0.082 Sum_probs=201.2
Q ss_pred HHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCC-CCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHc
Q 038818 87 AGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLP-KSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEI 165 (486)
Q Consensus 87 ~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~-~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~ 165 (486)
+..+.+.+...++ ....|....+..++.+.+.+|+.+.+|++ .+. ....++|+|+++++..++.+..+.
T Consensus 44 ~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~----~~~i~it~G~~~al~~~~~~l~~~----- 113 (396)
T PRK09147 44 PAFIKDALAANLD-GLASYPTTAGLPALREAIAAWLERRYGLPALDP----ATQVLPVNGSREALFAFAQTVIDR----- 113 (396)
T ss_pred CHHHHHHHHHHhh-hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCc----cceEEECCChHHHHHHHHHHHcCC-----
Confidence 3445555555443 23456555556788889999999888865 220 015788999998887666655431
Q ss_pred cccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 166 GRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 166 ~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
+..++.|+++..++..+..+++..|+ +++.||++++++|.+|+++|++.+.+. +.+++++.++||||.
T Consensus 114 ---~~~gd~vlv~~P~y~~~~~~~~~~g~---~~~~vp~~~~~~~~~d~~~l~~~~~~~------~k~i~l~nP~NPTG~ 181 (396)
T PRK09147 114 ---DGPGPLVVCPNPFYQIYEGAALLAGA---EPYFLNCDPANNFAPDFDAVPAEVWAR------TQLLFVCSPGNPTGA 181 (396)
T ss_pred ---CCCCCEEEEcCCCccchHHHHHhcCC---EEEEeccCccccCccCHHHHHHHHhhc------cEEEEEcCCCCCcCc
Confidence 00267788898888888899999999 999999986555789999999877643 346777899999999
Q ss_pred cC---CchHHHHHHHHhCceEEeeccccchhccCc-cchhhhc---CC--CCCC--ceeeccccccC-CCCcceEEEeeC
Q 038818 246 VD---PLGPLCDIAKRYSIWVHVDAAYAGSACICP-EFRHFID---GI--EGAD--SFSLNAHKWFF-TTLDCCCLWVKN 313 (486)
Q Consensus 246 id---pl~~I~~i~~~~g~~lhvD~a~g~~~~~~~-~~~~~~~---~~--~~aD--si~~~~hK~l~-~p~~~g~~~~~~ 313 (486)
+- .+++|+++|++|++|+++|.+|+.+..... .....+. .. ...+ .+..++.|.++ ....+|+++..+
T Consensus 182 ~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~ 261 (396)
T PRK09147 182 VLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDA 261 (396)
T ss_pred cCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCH
Confidence 85 578888899999999999999976432110 0000010 01 0112 55677899654 446788877543
Q ss_pred chHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 038818 314 PNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF-GVANLRNFLRSHVRMAQLFQELVGGDNR 392 (486)
Q Consensus 314 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~ 392 (486)
....+ +.....+... ....+...+++..+ ..+.+.+..+...+..+.+.+.|++.
T Consensus 262 -~l~~~-~~~~~~~~~~--------------------~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-- 317 (396)
T PRK09147 262 -ALLKK-FLLYRTYHGC--------------------AMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV-- 317 (396)
T ss_pred -HHHHH-HHHHhhhccc--------------------CCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 33322 2111011100 01122222323332 23445666667777777788888764
Q ss_pred eEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC--------CEeEEEEEecCCCC
Q 038818 393 FEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA--------GIYFIRFAVGATLT 463 (486)
Q Consensus 393 ~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--------~~~~lR~~~~~~~t 463 (486)
+.+..+.....+.+++. . + ...+.+.+. +.|+.+..+..+. +.+++|++++.
T Consensus 318 ~~~~~p~~g~f~~~~~~-~-------------~--~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~--- 378 (396)
T PRK09147 318 LDVQLPDAGFYLWAKVP-G-------------D--DTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA--- 378 (396)
T ss_pred cCCCCCCeeEEEEEECC-C-------------C--HHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC---
Confidence 44333333333444443 1 1 134555554 4677554443321 25789999963
Q ss_pred cHHHHHHHHHHHHHHH
Q 038818 464 EDRHVIAAWKVVQEKL 479 (486)
Q Consensus 464 t~~did~~i~~l~~~~ 479 (486)
+++++++.++.|.+++
T Consensus 379 ~~~~l~~~l~rl~~~~ 394 (396)
T PRK09147 379 PLAECVEAAERIVDFC 394 (396)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 3568888888887765
No 177
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.80 E-value=2.5e-17 Score=163.32 Aligned_cols=233 Identities=11% Similarity=0.092 Sum_probs=168.0
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ 186 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 186 (486)
..|....+|+. ++.|-|.+ .++++++|+.|+..++..... +++.|+++...|.+..
T Consensus 60 ~nPt~~~le~~----la~LEg~~---------~a~~~~SGmaAi~~~~~~ll~-----------~GD~Vv~~~~~Yg~t~ 115 (395)
T PRK08114 60 GTLTHFSLQEA----MCELEGGA---------GCALYPCGAAAVANAILAFVE-----------QGDHVLMTGTAYEPTQ 115 (395)
T ss_pred CChhHHHHHHH----HHHHhCCC---------eEEEEhHHHHHHHHHHHHHcC-----------CCCEEEEeCCCcHHHH
Confidence 45666667655 66665543 467888899888776665432 5677888888887765
Q ss_pred HHH----HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhC--
Q 038818 187 KAA----QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYS-- 260 (486)
Q Consensus 187 ~a~----~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g-- 260 (486)
..+ +..|+ ++..++. .|++.++++|++++ .+|.+.+++|++|.+.||++|+++||++|
T Consensus 116 ~l~~~~l~~~Gi---~v~~vd~-------~d~~~l~~~l~~~T------rlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g 179 (395)
T PRK08114 116 DFCSKILSKLGV---TTTWFDP-------LIGADIAKLIQPNT------KVVFLESPGSITMEVHDVPAIVAAVRSVNPD 179 (395)
T ss_pred HHHHHHHHhcCc---EEEEECC-------CCHHHHHHhcCCCc------eEEEEECCCCCCCEeecHHHHHHHHHHhCCC
Confidence 544 55688 8888763 37789999997654 48999999999999999999999999985
Q ss_pred ceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC--cceEEEeeCchHHHHHhcCCcccccCccCCCCCc
Q 038818 261 IWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL--DCCCLWVKNPNALIKALSTNPEFLRNKASDSKQV 338 (486)
Q Consensus 261 ~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~--~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~ 338 (486)
+.++||++++.+.. .+..+. ++|.+..+.|||++++. .+|+++.++ +........ .+
T Consensus 180 ~~lvVDnT~a~p~~-~~pl~~------GaDivv~S~tKyl~Ghsdv~~G~v~~~~-~~~~~l~~~--~~----------- 238 (395)
T PRK08114 180 AVIMIDNTWAAGVL-FKALDF------GIDISIQAGTKYLVGHSDAMIGTAVANA-RCWEQLREN--SY----------- 238 (395)
T ss_pred CEEEEECCCccccc-cCHHHc------CCcEEEEcCcccccCCCcceeEEEEcCH-HHHHHHHHH--HH-----------
Confidence 99999999988665 322222 89999999999999985 677665443 222211100 00
Q ss_pred cCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEE-ecCC----------------Ce
Q 038818 339 VDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEI-VAPR----------------NF 401 (486)
Q Consensus 339 ~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~-~~~~----------------~~ 401 (486)
..|....+..+|+.++ |.+-+.-+++++.++|..+.+.|+++|.++- ..|. ..
T Consensus 239 --------~~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~g 308 (395)
T PRK08114 239 --------LMGQMVDADTAYMTSR--GLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSS 308 (395)
T ss_pred --------hccCCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCc
Confidence 1122335566776665 6688888999999999999999999998863 3321 24
Q ss_pred eEEEEEeec
Q 038818 402 AVVCFRVLP 410 (486)
Q Consensus 402 ~~v~f~~~~ 410 (486)
++++|.+.+
T Consensus 309 g~~sf~l~~ 317 (395)
T PRK08114 309 GLFSFVLKK 317 (395)
T ss_pred eEEEEEecC
Confidence 688898863
No 178
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.80 E-value=8.7e-17 Score=159.79 Aligned_cols=287 Identities=12% Similarity=0.085 Sum_probs=189.1
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDP 196 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~ 196 (486)
++++.+++.++++++ +.++|+|+++++..++.+. . ++ .|++...++..+...++..|+
T Consensus 58 ~lr~~ia~~~~~~~~-------~i~it~Ga~~~l~~~~~~~-~-----------~~-~v~i~~P~y~~~~~~~~~~g~-- 115 (354)
T PRK06358 58 ELRKRIASFEQLDLE-------NVILGNGATELIFNIVKVT-K-----------PK-KVLILAPTFAEYERALKAFDA-- 115 (354)
T ss_pred HHHHHHHHHhCCChh-------hEEECCCHHHHHHHHHHHh-C-----------CC-cEEEecCChHHHHHHHHHcCC--
Confidence 455666666787665 7899999998886655442 1 33 466788888888888999999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHHHhCceEEeeccccchh
Q 038818 197 KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAKRYSIWVHVDAAYAGSA 273 (486)
Q Consensus 197 ~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~~~g~~lhvD~a~g~~~ 273 (486)
+++.+|.+.++.+.+| +++.+.+.+. +.+|+++.++||||.+-+ +++|.++|++||+++++|++|..+.
T Consensus 116 -~~~~~~~~~~~~~~~d-~~~~~~~~~~------~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~ 187 (354)
T PRK06358 116 -EIEYAELTEETNFAAN-EIVLEEIKEE------IDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFL 187 (354)
T ss_pred -eeEEEeCccccCCCcc-HHHHHhhccC------CCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccC
Confidence 9999999754457888 5555555322 346777899999999865 7888889999999999999996543
Q ss_pred ccCccchhhhcCCCCCC--ceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCC
Q 038818 274 CICPEFRHFIDGIEGAD--SFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSR 350 (486)
Q Consensus 274 ~~~~~~~~~~~~~~~aD--si~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr 350 (486)
.. +.....+..+...+ .+..++.|.++ ....+|+++..++............+
T Consensus 188 ~~-~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~~~----------------------- 243 (354)
T PRK06358 188 EE-NETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMREPW----------------------- 243 (354)
T ss_pred CC-ccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCCC-----------------------
Confidence 21 11111111222212 45667899998 66678988776544332221111100
Q ss_pred CCCchHHHHHHHHhch-HHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHH
Q 038818 351 RFRALKLWLVLRSFGV-ANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNR 429 (486)
Q Consensus 351 ~~~~l~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 429 (486)
....+..+++...+.. +.+.+..+...+.++.+.+.|++++++++. ++..+.+.+++.+ . .
T Consensus 244 ~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~g~f~~~~~~~--------------~---~ 305 (354)
T PRK06358 244 SINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVY-KPSVNFIFFKLEK--------------P---I 305 (354)
T ss_pred cchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc-CCcceEEEEEcCc--------------h---H
Confidence 1123333444444433 344677778888889999999988787765 4555655444432 1 3
Q ss_pred HHHHHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 430 KLLESINASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 430 ~l~~~l~~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
++.+.+.++|+.+..+..+. +..++|+++. +.++.++++++|+++.
T Consensus 306 ~~~~~l~~~gI~v~~~~~f~~~~~~~iRls~~----~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 306 DLRKELLKKGILIRSCSNYRGLDENYYRVAVK----SREDNKKLLKALEVIL 353 (354)
T ss_pred HHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC----CHHHHHHHHHHHHHHh
Confidence 56777777887655554443 3468999984 4568999999998764
No 179
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.80 E-value=1.3e-16 Score=149.25 Aligned_cols=379 Identities=13% Similarity=0.099 Sum_probs=239.0
Q ss_pred CHHHHHHHHHhhhcCCCc------CCCCCCcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHH
Q 038818 52 PIETILQDVQQHIVPGIT------HWQSPYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEM 125 (486)
Q Consensus 52 ~~~~il~~l~~~~~~~~~------~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l 125 (486)
++..++..|.....++.. ....|.-++-+.+.......+.+.+.+.. ...|..+.+.-.-.+++.+++-+-
T Consensus 43 tir~i~~~l~~~~~p~~~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk---~N~Yaps~G~~~AR~AVAeYl~~~ 119 (447)
T KOG0259|consen 43 TIRGILSALFDCCDPEKKKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGK---GNGYAPSVGILPARRAVAEYLNRD 119 (447)
T ss_pred cHHHHHHHHhhcCCcccCceeccCCCCCCCccccccCCHHHHHHHHHHHhcCC---CCCcCCccccHHHHHHHHHHhhcC
Confidence 445566665554333321 11345555666555555555555555432 235566666666666666775554
Q ss_pred cCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecC
Q 038818 126 LKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTT 205 (486)
Q Consensus 126 ~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d 205 (486)
+..+-+ ..+.++|+|.++|+-.++.+..+ ++.-|+++..+++-...-|...|+ +|+++..-
T Consensus 120 l~~kl~-----a~DV~ltsGC~qAIe~~i~~LA~-----------p~aNILlPrPGfp~Y~~~a~~~~l---EVR~ydlL 180 (447)
T KOG0259|consen 120 LPNKLT-----ADDVVLTSGCSQAIELAISSLAN-----------PGANILLPRPGFPLYDTRAIYSGL---EVRYYDLL 180 (447)
T ss_pred CCCccC-----cCceEEeccchHHHHHHHHHhcC-----------CCCceecCCCCCchHHHhhhhcCc---eeEeeccc
Confidence 433221 23789999999999888877544 778899999998888888999999 99999987
Q ss_pred CCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc---CCchHHHHHHHHhCceEEeeccccchhccCccchhh
Q 038818 206 KSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV---DPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHF 282 (486)
Q Consensus 206 ~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i---dpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~ 282 (486)
+..+|++|++.+|.+++++| +++++..++|+.|.+ +.|++|+++|+++|+.++.|+.|+...+....+-..
T Consensus 181 Pe~~weIDL~~veal~DENT------~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpm 254 (447)
T KOG0259|consen 181 PEKDWEIDLDGVEALADENT------VAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPM 254 (447)
T ss_pred CcccceechHHHHHhhccCe------eEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccch
Confidence 77789999999999999987 478899999999988 679999999999999999999997765443333221
Q ss_pred hcCCCCCCceeec-cccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCch--HHH
Q 038818 283 IDGIEGADSFSLN-AHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRAL--KLW 358 (486)
Q Consensus 283 ~~~~~~aDsi~~~-~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l--~~~ 358 (486)
-.--+.+=.+|.+ ..|-+.+| .-.|++.+.|+.-. |.. ...+..- .++.+.+.. +...+ ++=
T Consensus 255 g~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gv---f~~-~~~~q~~-------~~~~~~~~~---p~TiiQ~AlP 320 (447)
T KOG0259|consen 255 GKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGV---FRD-TKVVQGI-------KNFLDIIPG---PATIIQGALP 320 (447)
T ss_pred hhccccCceEeecccccccccCCceeeeEEEeccccc---ccc-hHHHHHH-------HHHHhccCC---ccHhHHHHhH
Confidence 1111234455555 35555544 57999998876321 110 0000000 000000000 00000 111
Q ss_pred HHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHh-
Q 038818 359 LVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINA- 437 (486)
Q Consensus 359 ~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~- 437 (486)
..|..--.+-+.....-...+++.-.+.|+++|++.....|+..+..+.-.... . ..+.. ....++++|.+
T Consensus 321 ~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s-~------~~~~~-dD~dFc~kL~~E 392 (447)
T KOG0259|consen 321 DILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLS-L------FPDIE-DDVDFCQKLARE 392 (447)
T ss_pred HHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchh-h------hcccc-ccHHHHHHHhhh
Confidence 122222345677777888889999999999999999766776555443211110 0 00000 11245555544
Q ss_pred cCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 438 SGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 438 ~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
+..+++++..+.-.+|+|++++ +.++.++++.+.|++...+-.
T Consensus 393 esv~~LPG~af~~~nw~Ri~i~---~~~~~leea~~Rik~Fc~RH~ 435 (447)
T KOG0259|consen 393 ESVICLPGQAFGLKNWLRIVIT---VEEEMLEEAFSRIKEFCDRHS 435 (447)
T ss_pred cceEEeccccccCCCeEEEEEc---cChHHHHHHHHHHHHHHHhhh
Confidence 4556677777777899999984 466789999999999886543
No 180
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.80 E-value=9.5e-18 Score=166.80 Aligned_cols=287 Identities=13% Similarity=0.134 Sum_probs=188.2
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ 186 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 186 (486)
..|....+|++ ++++.|.+ .+++++||+.|+..++.+... +++.|++++..|.+..
T Consensus 48 gnPt~~~lE~~----lA~l~g~~---------~~~~~~sG~~Ai~~al~all~-----------~GD~Vl~~~~~y~~t~ 103 (377)
T TIGR01324 48 GTLTHFALQDA----MCELEGGA---------GCYLYPSGLAAVTNSILAFVK-----------AGDHVLMVDSAYEPTR 103 (377)
T ss_pred CCccHHHHHHH----HHHHhCCC---------cEEEECcHHHHHHHHHHHhcC-----------CCCEEEEcCCCcHHHH
Confidence 34555666655 67777754 468899999999877765532 5677888877776654
Q ss_pred HH----HHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCce
Q 038818 187 KA----AQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIW 262 (486)
Q Consensus 187 ~a----~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~ 262 (486)
.. +...|+ ++..++.+ +.++|++++++.+ .+|++++++|++|.+.||++|+++|+++|++
T Consensus 104 ~~~~~~~~~~gi---~v~~~d~~-------~~e~l~~~i~~~t------klV~lesp~Np~g~~~dl~~I~~la~~~g~~ 167 (377)
T TIGR01324 104 YFCDIVLKRMGV---DITYYDPL-------IGEDIATLIQPNT------KVLFLEAPSSITFEIQDIPAIAKAARNPGIV 167 (377)
T ss_pred HHHHHHHHhcCc---EEEEECCC-------CHHHHHHhcCCCc------eEEEEECCCCCCCcHHHHHHHHHHHHHcCCE
Confidence 33 345677 77766432 2377888876543 4899999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccC
Q 038818 263 VHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVD 340 (486)
Q Consensus 263 lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 340 (486)
++||++|+.+....+ .. .++|.++.+.|||++++.+ +|+++.++ +.+.+... ..+..
T Consensus 168 livD~t~a~g~~~~p-l~------~gaDivv~S~tK~l~G~~d~~gG~v~~~~-~~~~~l~~--~~~~~----------- 226 (377)
T TIGR01324 168 IMIDNTWAAGLLFKP-LE------HGVDISIQAGTKYLVGHSDIMIGTVVANA-RTWDQLRE--HSYLM----------- 226 (377)
T ss_pred EEEECCCccccccCc-cc------cCceEEEecCceeccCCCCceEEEEEeCH-HHHHHHHH--HHHHh-----------
Confidence 999999987655332 11 2799999999999998754 46555543 33222111 01111
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeE-EecC----------------CCeeE
Q 038818 341 YKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFE-IVAP----------------RNFAV 403 (486)
Q Consensus 341 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~----------------~~~~~ 403 (486)
|....+..+|..++ |.+-+..++++..++|..+.+.|+++|.++ +..| ...++
T Consensus 227 --------G~~l~p~~a~~~~r--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~ 296 (377)
T TIGR01324 227 --------GQMVDADDAYTTLR--GLRTLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGL 296 (377)
T ss_pred --------CCCCCHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCce
Confidence 11224456676666 456777889999999999999999998874 3332 12568
Q ss_pred EEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcE--------EEee-e-eE---------CCEeEEEEEecCCCCc
Q 038818 404 VCFRVLPSASGLGDGKANEGANELNRKLLESINASGQL--------YVSH-G-MV---------AGIYFIRFAVGATLTE 464 (486)
Q Consensus 404 v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~--------~~~~-~-~~---------~~~~~lR~~~~~~~tt 464 (486)
++|.+.+.. .+...++.+.|.--+.. .+.+ . .. -..+.+|+|++-
T Consensus 297 ~s~~l~~~~------------~~~~~~~~~~l~~~~~~~slG~~~sl~~~~~~~~~~~~~~~~~~~~~liR~svGl---- 360 (377)
T TIGR01324 297 FSFVLQRLT------------QKQVHAFLDHLQLFGLGYSWGGYESLALCNQPELGHRPNIKRNLEGPLIRVHIGL---- 360 (377)
T ss_pred EEEEECCCC------------HHHHHHHHHhCCcceEeccCCCccceeecCCCCCCHHHHHhccCCCCEEEEEeCC----
Confidence 899886421 22234555554332211 1110 0 00 012579999953
Q ss_pred HHHHHHHHHHHHHHHHH
Q 038818 465 DRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 465 ~~did~~i~~l~~~~~~ 481 (486)
||.|.+++.|.+.++.
T Consensus 361 -E~~~dl~~dl~~al~~ 376 (377)
T TIGR01324 361 -ENVDDLKADLKAGFEA 376 (377)
T ss_pred -CCHHHHHHHHHHHHhc
Confidence 2677778887777654
No 181
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.80 E-value=6.6e-17 Score=162.80 Aligned_cols=325 Identities=13% Similarity=0.080 Sum_probs=201.0
Q ss_pred HHHHHHHHhhcCCC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcc
Q 038818 88 GFLGEMLSSGFNVV-GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIG 166 (486)
Q Consensus 88 ~~~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 166 (486)
..+.+.+...+... ...|....+..++.+.+.+|+.+.+|.+.+. ....++|+|+++++..++.+..+
T Consensus 47 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~----~~~ii~t~G~~~~i~~~~~~~~~------- 115 (385)
T PRK09276 47 DHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDP----ETEVISLIGSKEGIAHIPLAFVN------- 115 (385)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEccCcHHHHHHHHHHhCC-------
Confidence 34555555554322 2345443445788888999999888864321 01477789988888766655433
Q ss_pred ccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 167 RENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 167 ~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
+++.|+++..++..+...++..|+ +++.+|.+.++.+.+|++++++.+.+. +.+|+++.++||||.+
T Consensus 116 ----~gd~Vl~~~P~y~~~~~~~~~~g~---~~~~v~~~~~~g~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~ 182 (385)
T PRK09276 116 ----PGDVVLVPDPGYPVYKIGTIFAGG---EPYFMPLKEENGFLPDLDAIPEDVAKK------AKLMFINYPNNPTGAV 182 (385)
T ss_pred ----CCCEEEEcCCCCcChHHHHHHcCC---EEEEEecCCCCCCcCCHHHHHHhcccc------ceEEEEeCCCCCCCCC
Confidence 667788898999888889999999 999999875434678999998877643 3467788899999999
Q ss_pred CC---chHHHHHHHHhCceEEeeccccchhccCccchhh--hcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHH
Q 038818 247 DP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHF--IDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKA 320 (486)
Q Consensus 247 dp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~ 320 (486)
-+ +++|+++|++||+|+++|.+|+.+.......... +........+..++.|.++.| .-+|+++.. +.... .
T Consensus 183 ~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~-~~l~~-~ 260 (385)
T PRK09276 183 ADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGN-ADLIA-G 260 (385)
T ss_pred CCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCC-HHHHH-H
Confidence 66 6888999999999999999997643211111111 111112234566788998644 347877654 33332 2
Q ss_pred hcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC
Q 038818 321 LSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP 398 (486)
Q Consensus 321 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 398 (486)
+.....++.. ....+...++...+ ....+++..++..+.++++.+.|++. ++++. +
T Consensus 261 ~~~~~~~~~~--------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~ 318 (385)
T PRK09276 261 LGKVKSNVDS--------------------GVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKL-GLEVE-P 318 (385)
T ss_pred HHHHHhhccC--------------------CCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCccc-C
Confidence 2110001100 00112222222322 24556777777788899999999887 77765 3
Q ss_pred CCeeE-EEEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHH
Q 038818 399 RNFAV-VCFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKV 474 (486)
Q Consensus 399 ~~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~ 474 (486)
+..+. +.+++.+.. ...++.+.+. +.|+.+..+..+. +..++|+++. .+++++.+.++.
T Consensus 319 ~~~~~~~~v~~~~~~--------------~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~---~~~~~l~~~l~~ 381 (385)
T PRK09276 319 PKATFYVWAPVPKGY--------------TSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALT---VPDERIEEAVER 381 (385)
T ss_pred CCcceEEEEECCCCC--------------CHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeC---CCHHHHHHHHHH
Confidence 44444 344443210 1235566655 4677544433332 2468999995 246677777776
Q ss_pred HHH
Q 038818 475 VQE 477 (486)
Q Consensus 475 l~~ 477 (486)
|.+
T Consensus 382 l~~ 384 (385)
T PRK09276 382 IKK 384 (385)
T ss_pred Hhh
Confidence 653
No 182
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.80 E-value=3.6e-17 Score=163.90 Aligned_cols=285 Identities=15% Similarity=0.075 Sum_probs=191.1
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH----HHHHHc
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ----KAAQIA 192 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~----~a~~~~ 192 (486)
++.+.++++.|.+ .+++++||++|+..++.+... +++.|+++...|.+.. ..+...
T Consensus 69 ~Le~~lA~l~g~~---------~~l~~~sgt~Ai~~~l~al~~-----------~GD~Vl~~~~~y~~~~~~~~~~~~~~ 128 (394)
T PRK07050 69 ALAQRLAEIEGGR---------HALLQPSGLAAISLVYFGLVK-----------AGDDVLIPDNAYGPNRDHGEWLARDF 128 (394)
T ss_pred HHHHHHHHHhCCC---------eEEEeccHHHHHHHHHHHHhC-----------CCCEEEEecCCcccHHHHHHHHHHhc
Confidence 4445678888853 578999999999888776632 6778888888887644 456677
Q ss_pred CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccch
Q 038818 193 GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGS 272 (486)
Q Consensus 193 G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~ 272 (486)
|+ +++.++.. +.+++++++++. +.+|+++.++|++|.+.|+++|+++|+++|+++++|++|+.+
T Consensus 129 Gi---~v~~vd~~-------~~~~l~~~i~~~------tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~ 192 (394)
T PRK07050 129 GI---TVRFYDPL-------IGAGIADLIQPN------TRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAG 192 (394)
T ss_pred Ce---EEEEECCC-------CHHHHHHhcCCC------CeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCcccc
Confidence 88 88887642 456788877654 347889999999999999999999999999999999999775
Q ss_pred hccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCC
Q 038818 273 ACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSR 350 (486)
Q Consensus 273 ~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr 350 (486)
....+ .. .++|.++.+.+|++++..+ .|++++++++...+.... ..++ |-
T Consensus 193 ~~~~~-l~------~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~-~~~~--------------------G~ 244 (394)
T PRK07050 193 LAFKP-FE------HGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLA-RMRL--------------------GI 244 (394)
T ss_pred cccCH-HH------cCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHH-HHhc--------------------CC
Confidence 54322 11 1689999999999987654 566777776554332110 0011 11
Q ss_pred CCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC-----------------CeeEEEEEeecCCC
Q 038818 351 RFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR-----------------NFAVVCFRVLPSAS 413 (486)
Q Consensus 351 ~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------------~~~~v~f~~~~~~~ 413 (486)
...+...|..++ |.+.+..++++..+++..+.+.|+++|.+..+..| ..+++.|.+.....
T Consensus 245 ~~~~~~a~l~lr--~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~ 322 (394)
T PRK07050 245 GVSADDCSLVLR--GLPSLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYS 322 (394)
T ss_pred CCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCC
Confidence 123455566665 45677788999999999999999999887644311 14567777754210
Q ss_pred CCCCCCCccchHHHHHHHHHHHHhcCcE--------EEeeee-----E----CCEeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 414 GLGDGKANEGANELNRKLLESINASGQL--------YVSHGM-----V----AGIYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 414 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~--------~~~~~~-----~----~~~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
.+...++.+.|..-+.. .+.+.. . ...+.+|+|++- ||+|.+++.|.
T Consensus 323 -----------~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGl-----E~~~dl~~dl~ 386 (394)
T PRK07050 323 -----------PAQVDAFVEALELFAIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGL-----EDEADLIADLE 386 (394)
T ss_pred -----------HHHHHHHHHcCCCCeeccccCCccceEeeCcccccchhhcCCCCCEEEEEeCc-----CCHHHHHHHHH
Confidence 12234555554332221 111210 0 012579999952 36788888888
Q ss_pred HHHHHHh
Q 038818 477 EKLDGIL 483 (486)
Q Consensus 477 ~~~~~l~ 483 (486)
+.++..+
T Consensus 387 ~al~~~~ 393 (394)
T PRK07050 387 QALEAAL 393 (394)
T ss_pred HHHHHhh
Confidence 8776654
No 183
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.80 E-value=4.6e-17 Score=160.32 Aligned_cols=331 Identities=18% Similarity=0.083 Sum_probs=194.0
Q ss_pred HHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCC
Q 038818 53 IETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSF 132 (486)
Q Consensus 53 ~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~ 132 (486)
.++.++.+++.+..+-... --.|+|.-.. +.......+.+..+. +...+.+++.+.+++.+|.+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~-~~~ylgl~~~-~~~~~~~~~~~~~~~-----------g~~~~~~~Le~~lA~~~g~~~e- 72 (346)
T TIGR03576 7 REKALEIIREKISRGGRDS-LYDLTGLAGG-FKIDEEDLELLETYV-----------GPAIFEEKVQELGREHLGGPEE- 72 (346)
T ss_pred HHHHHHHHHHHHhccCCcc-ccccccCCCC-hhHHHHHHHHHHHhc-----------CCHHHHHHHHHHHHHHcCCCcc-
Confidence 4566777777665553221 1147777433 222333333343331 2347788888999999999765
Q ss_pred ccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEec---CCCchHHHHHHHHcCCCCCCeEEEecCCCCC
Q 038818 133 LFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGS---DQTHSALQKAAQIAGIDPKNFRAIKTTKSSS 209 (486)
Q Consensus 133 ~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s---~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~ 209 (486)
..++++||++||..++.+..+ +++.|+++ ...|.++..+++..|. +++.+
T Consensus 73 ------~ilv~~gg~~a~~~~~~al~~-----------~gd~Vli~~~d~p~~~s~~~~~~l~ga---~~~~~------- 125 (346)
T TIGR03576 73 ------KILVFNRTSSAILATILALEP-----------PGRKVVHYLPEKPAHPSIPRSCKLAGA---EYFES------- 125 (346)
T ss_pred ------eEEEECCHHHHHHHHHHHhCC-----------CCCEEEECCCCCCCchhHHHHHHHcCC---EEecc-------
Confidence 689999999999887776543 45556542 5699999999999998 65322
Q ss_pred cccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc---CCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCC
Q 038818 210 FTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV---DPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGI 286 (486)
Q Consensus 210 ~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i---dpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~ 286 (486)
.|+++|+. . . .+.+|+++ |++++|.+ .||++|+++|++||+|++||.||+.+........... .
T Consensus 126 --~~l~~l~~-~----~---~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~-~- 192 (346)
T TIGR03576 126 --DELSELKK-I----D---GTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPAL-D- 192 (346)
T ss_pred --CCHHHHhh-C----c---CceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHH-H-
Confidence 14444422 1 1 13355555 56889988 8999999999999999999999986543211101111 1
Q ss_pred CCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhch
Q 038818 287 EGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGV 366 (486)
Q Consensus 287 ~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~ 366 (486)
.++|.++.+++|++.++. .|+++.+ +...........+|... ..+..+++++..+..
T Consensus 193 ~~~divv~s~SKalaG~r-~G~v~~~-~~li~~l~~~~~~~~~s---------------------~~~~~~~aa~~aL~~ 249 (346)
T TIGR03576 193 LGADLVVTSTDKLMDGPR-GGLLAGR-KELVDKIKSVGEQFGLE---------------------AQAPLLAAVVRALEE 249 (346)
T ss_pred cCCcEEEeccchhccccc-eEEEEeC-HHHHHHHHHhhcCcccC---------------------ccHHHHHHHHHHHhh
Confidence 147888889999775554 5666654 34433222222223211 112222333333321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeee
Q 038818 367 ANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHG 446 (486)
Q Consensus 367 ~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~ 446 (486)
...+.+.+...++.+++.+.++. +.+. ++..+.+.+++.+. +. .+.+.+.+.++|+++.+..
T Consensus 250 ~~~~~~~~~l~~r~~~~~~~l~~---~~~~-~~~~~f~~~~~~~~-------------~~-~~~~~~ll~~~gV~v~~~~ 311 (346)
T TIGR03576 250 FELSRIRDAFKRKEEVYLRLFDK---LNVE-RTPTGFVIKGVEEE-------------KL-IEIGLDLLRNYGIITITAV 311 (346)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHh---CCCC-cCCCeEEEEeCCCC-------------CH-HHHHHHHHHhCCEEEeCCc
Confidence 12244455666667777777764 3333 33345444444321 10 1233455556787655544
Q ss_pred eEC-CEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 447 MVA-GIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 447 ~~~-~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
.+. ..+++|+++..+.-+..+.++++++|++-
T Consensus 312 ~f~~~~~~vRis~~~~~~~~~~~~~~~~al~~~ 344 (346)
T TIGR03576 312 GMPGASKTLRFDLAAKDAERIGDDYLVEAVKDS 344 (346)
T ss_pred ccCCCCCeEEEEEecChHHhcCHHHHHHHHHhc
Confidence 332 25699999975443334799999999764
No 184
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.79 E-value=3.6e-17 Score=164.20 Aligned_cols=324 Identities=16% Similarity=0.113 Sum_probs=194.4
Q ss_pred ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCC
Q 038818 102 GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQT 181 (486)
Q Consensus 102 ~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~ 181 (486)
...|..++...+||+.+ ++.+|.+ .+++|+|||+|+..++.+... ++++| ++. .
T Consensus 46 d~~Y~~~~g~~~Leeai----a~~~g~~---------~vv~t~~Gt~Al~la~~al~~-----------pGD~V-~~~-~ 99 (431)
T cd00617 46 DEAYAGSKSFYDLEDAV----QDLFGFK---------HIIPTHQGRGAENILFSILLK-----------PGRTV-PSN-M 99 (431)
T ss_pred CCccCCCCCHHHHHHHH----HHHHCCC---------eEEEcCCHHHHHHHHHHHhCC-----------CCCEE-ccC-C
Confidence 34688888888888775 4455553 479999999999888776543 55666 454 5
Q ss_pred ch-HHHHHHHHcCCCCCCeEEEecCCCC--------CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccc-cccC---C
Q 038818 182 HS-ALQKAAQIAGIDPKNFRAIKTTKSS--------SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAI-TTVD---P 248 (486)
Q Consensus 182 H~-s~~~a~~~~G~g~~~v~~v~~d~~~--------~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~-G~id---p 248 (486)
|+ +....+...|. .++.+++++.. .|.+|+++|+++|.+... ..+.+|+++.++|++ |.+- +
T Consensus 100 ~f~~~~~~i~~~Ga---~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~--~~~~~I~v~~p~N~~gG~~~s~~~ 174 (431)
T cd00617 100 HFDTTRGHIEANGA---VPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGA--ENIPYIVLTITNNTAGGQPVSMAN 174 (431)
T ss_pred cccchHHHHHhCCC---EeEEEecccccccccccCCCCCcCHHHHHHHhCcccC--CCccEEEEECCcCCCCCccCCHHH
Confidence 55 45567788898 99999997532 255999999999985411 123468888888887 7764 5
Q ss_pred chHHHHHHHHhCceEEeeccccch-hccC----ccch-----hhh-cCCCCCCceeeccccccCCCCcceEEEeeCchHH
Q 038818 249 LGPLCDIAKRYSIWVHVDAAYAGS-ACIC----PEFR-----HFI-DGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNAL 317 (486)
Q Consensus 249 l~~I~~i~~~~g~~lhvD~a~g~~-~~~~----~~~~-----~~~-~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~ 317 (486)
+++|.++|++||+|+|.|+|+... ..+. +.+. ... .-...+|++++++||-+.+|. .|+++.++++..
T Consensus 175 l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~-GG~i~~~d~~l~ 253 (431)
T cd00617 175 LREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNI-GGFLALRDDELY 253 (431)
T ss_pred HHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCcc-ceEEEeCcHHHH
Confidence 678899999999999999997532 1111 1111 100 012469999999999988876 456777776555
Q ss_pred HHHhcCCcccccCccCCCCCccCCCCccccCCCCCCch-HHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe
Q 038818 318 IKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRAL-KLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIV 396 (486)
Q Consensus 318 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l-~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 396 (486)
.+..... +... + +...++-...-. ++..++... .+ .+.+++..+.+++|.+.|++. |+.+.
T Consensus 254 ~~~~~~~--~~~~------~------~~~~gG~~~r~~~A~A~gL~e~-~~--~~~l~~~~~~r~~l~~~L~~~-G~~v~ 315 (431)
T cd00617 254 EEARQRV--VLYE------G------FVTYGGMAGRDMEALAQGLREA-VE--EDYLRHRVEQVRYLGDRLDEA-GVPIV 315 (431)
T ss_pred HHHHHhc--cccC------C------ccccccccHHHHHHHHHHHHhc-cc--HHHHHHHHHHHHHHHHHHHHC-CCCcc
Confidence 4332111 0000 0 000011111111 111122211 11 245566667779999999987 88887
Q ss_pred cCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHH-HhcCcEEEeeeeE------C-------CEeEEEEEecCCC
Q 038818 397 APRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESI-NASGQLYVSHGMV------A-------GIYFIRFAVGATL 462 (486)
Q Consensus 397 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~------~-------~~~~lR~~~~~~~ 462 (486)
.|.....+.+.........+ ..+. -...+...| .+.|+..+.-+.+ . .-..+|+.+--..
T Consensus 316 ~P~Ggh~v~~d~~~~~~~~~----~~~~--~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~ 389 (431)
T cd00617 316 EPAGGHAVFIDAREFLPHIP----QEQF--PAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRV 389 (431)
T ss_pred CCCcceEEEEEhHHhcCCCC----cccC--cHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccc
Confidence 65544444444432100000 0000 123344333 3456543321110 1 1368999984445
Q ss_pred CcHHHHHHHHHHHHHHHHH
Q 038818 463 TEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 463 tt~~did~~i~~l~~~~~~ 481 (486)
-|.+++|.+.+.|..+.++
T Consensus 390 ~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 390 YTQDHMDYVAAAVIALYER 408 (431)
T ss_pred cCHHHHHHHHHHHHHHHhh
Confidence 5778999999999998754
No 185
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=3.7e-17 Score=164.88 Aligned_cols=310 Identities=15% Similarity=0.156 Sum_probs=191.1
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH
Q 038818 108 SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK 187 (486)
Q Consensus 108 ~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 187 (486)
.|....+| +.++++.|.+ .++++++|+.|+..++.+... +++.|+++...|.+...
T Consensus 68 ~p~~~~Le----~~lA~l~g~~---------~av~~sSG~aAi~~al~all~-----------~Gd~Vv~~~~~y~~t~~ 123 (436)
T PRK07812 68 NPTQDVVE----QRIAALEGGV---------AALLLASGQAAETFAILNLAG-----------AGDHIVSSPRLYGGTYN 123 (436)
T ss_pred CchHHHHH----HHHHHHhCCC---------eEEEEccHHHHHHHHHHHHhC-----------CCCEEEEeCCcchHHHH
Confidence 44444454 5678888865 358888999998777765432 56677778777766543
Q ss_pred H----HHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceE
Q 038818 188 A----AQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWV 263 (486)
Q Consensus 188 a----~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~l 263 (486)
. +...|+ +++.++ +. .|+++++++|++++ .+|++..++|++|.+.|+++|+++|+++|+++
T Consensus 124 ~~~~~l~~~Gi---~v~~vd-d~-----~d~e~l~~ai~~~t------klV~ie~~sNp~G~v~Dl~~I~~la~~~gi~l 188 (436)
T PRK07812 124 LFHYTLPKLGI---EVSFVE-DP-----DDLDAWRAAVRPNT------KAFFAETISNPQIDVLDIPGVAEVAHEAGVPL 188 (436)
T ss_pred HHHHHhhcCeE---EEEEEC-CC-----CCHHHHHHhCCCCC------eEEEEECCCCCCCeecCHHHHHHHHHHcCCEE
Confidence 3 334566 777774 32 28999998887543 47899999999999999999999999999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCc-ceEEEeeCch-HHHHH-----hcCCcccccCccCCCC
Q 038818 264 HVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD-CCCLWVKNPN-ALIKA-----LSTNPEFLRNKASDSK 336 (486)
Q Consensus 264 hvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~~~~~-~~~~~-----~~~~~~y~~~~~~~~~ 336 (486)
+||++++.+....+ .. .++|.++.++||+++++.+ .|.+++.... .+... ....++|....-.. .
T Consensus 189 iVD~t~a~~~~~~p-l~------~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 260 (436)
T PRK07812 189 IVDNTIATPYLIRP-LE------HGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAE-L 260 (436)
T ss_pred EEECCCcccccCCc-hh------cCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhh-c
Confidence 99999976544322 11 2799999999999986632 4555554321 11000 00111111100000 0
Q ss_pred CccC----CC-CccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe-cC-----C------
Q 038818 337 QVVD----YK-DWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIV-AP-----R------ 399 (486)
Q Consensus 337 ~~~~----~~-~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~-----~------ 399 (486)
.... .. .+....|-......+|..++ |.+.+..++++..++|..+.+.|+++|.++-+ .| |
T Consensus 261 ~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r--gl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~ 338 (436)
T PRK07812 261 GPPAYALKARVQLLRDLGSAISPFNAFLIAQ--GLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAK 338 (436)
T ss_pred chhHHHHHHHHHHHHhcCCCCCHHHHHHHhc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHH
Confidence 0000 00 00111233344556665554 67889999999999999999999999987543 22 0
Q ss_pred ------CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHh--c----Cc---EEEeeee-----E-------CC--
Q 038818 400 ------NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINA--S----GQ---LYVSHGM-----V-------AG-- 450 (486)
Q Consensus 400 ------~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~----g~---~~~~~~~-----~-------~~-- 450 (486)
..++++|.+.+. .+...++.+.|.- . |- ++..+.. . .|
T Consensus 339 ~~~~~g~gg~~sf~l~~~-------------~~~~~~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~ 405 (436)
T PRK07812 339 RLAPKGTGAVLSFELAGG-------------VEAGKAFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVT 405 (436)
T ss_pred HhCcCCCceEEEEEecCC-------------HHHHHHHHHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCC
Confidence 145788888642 1223455554421 1 11 0111110 0 12
Q ss_pred EeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 451 IYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 451 ~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
.+.+|+|++- ||+|.+++.|.++++..-+
T Consensus 406 ~~liRlSvGl-----Ed~~dli~dl~~Al~~~~~ 434 (436)
T PRK07812 406 PGLVRLAVGI-----EGIDDILADLEAGFAAAKA 434 (436)
T ss_pred CCeEEEEecc-----CCHHHHHHHHHHHHHhhhc
Confidence 4579999953 3778888888887765543
No 186
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.79 E-value=3.4e-17 Score=164.00 Aligned_cols=233 Identities=18% Similarity=0.188 Sum_probs=160.5
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH
Q 038818 108 SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK 187 (486)
Q Consensus 108 ~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 187 (486)
.|...++| +.++++.|.+. ++++++|++|+..++.+... +++.|+++...|.+...
T Consensus 60 ~p~~~~Le----~~lA~~~g~~~---------~i~~~sG~~Ai~~~l~all~-----------~Gd~Vl~~~~~y~~t~~ 115 (388)
T PRK07811 60 NPTRTALE----EQLAALEGGAY---------GRAFSSGMAATDCLLRAVLR-----------PGDHIVIPNDAYGGTFR 115 (388)
T ss_pred CccHHHHH----HHHHHHhCCCc---------eEEeCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchHHHH
Confidence 34445555 45777777753 36667788888777766533 56778888888876444
Q ss_pred HHHH----cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceE
Q 038818 188 AAQI----AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWV 263 (486)
Q Consensus 188 a~~~----~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~l 263 (486)
.+.. .|+ +++.++. .|+++|++++++++ .+|+++.++|++|.+.|+++|+++|+++|+++
T Consensus 116 ~~~~~~~~~gi---~~~~~d~-------~d~e~l~~~i~~~t------klV~ie~p~NPtg~~~dl~~I~~la~~~gi~l 179 (388)
T PRK07811 116 LIDKVFTRWGV---EYTPVDL-------SDLDAVRAAITPRT------KLIWVETPTNPLLSITDIAALAELAHDAGAKV 179 (388)
T ss_pred HHHHhCcCCCe---EEEEeCC-------CCHHHHHHhcCcCC------eEEEEECCCCCcceecCHHHHHHHHHHcCCEE
Confidence 3322 355 5555542 48999999887643 47889999999999999999999999999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCC
Q 038818 264 HVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDY 341 (486)
Q Consensus 264 hvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 341 (486)
++|++|+.+....+ .. .++|.++.+++|++++|.+ .|+++++++...... . ++...
T Consensus 180 IvD~a~a~~~~~~p-~~------~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~-~----~~~~~---------- 237 (388)
T PRK07811 180 VVDNTFASPYLQQP-LA------LGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAF-A----FLQNG---------- 237 (388)
T ss_pred EEECCCCccccCCc-hh------hCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHH-H----HHHHh----------
Confidence 99999976543222 11 2789999999999998754 577777766543321 1 11000
Q ss_pred CCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC-----------------CeeEE
Q 038818 342 KDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR-----------------NFAVV 404 (486)
Q Consensus 342 ~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------------~~~~v 404 (486)
.+.....+..|..++. .+.+..++++..+++..+.+.|+++|+++-+.-| ..+++
T Consensus 238 ------~g~~~s~~~a~l~~~~--L~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~ 309 (388)
T PRK07811 238 ------AGAVPGPFDAYLTLRG--LKTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMV 309 (388)
T ss_pred ------cCCCCCHHHHHHHHhc--cCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceE
Confidence 0111233455655554 4567788899999999999999999988643211 14588
Q ss_pred EEEeec
Q 038818 405 CFRVLP 410 (486)
Q Consensus 405 ~f~~~~ 410 (486)
+|.+.+
T Consensus 310 s~~~~~ 315 (388)
T PRK07811 310 SVRLAG 315 (388)
T ss_pred EEEeCC
Confidence 898863
No 187
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.79 E-value=4.1e-17 Score=163.60 Aligned_cols=289 Identities=17% Similarity=0.157 Sum_probs=188.2
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ 186 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 186 (486)
..|...++| +.++++.|.+ ..+++++|+.|+..++.+... +++.|+++...|.+..
T Consensus 62 ~~p~~~~le----~~lA~l~g~~---------~~i~~ssG~~Ai~~~l~all~-----------~GD~Vi~~~~~y~~~~ 117 (398)
T PRK08249 62 TNPTVQAFE----EKVRILEGAE---------AATAFSTGMAAISNTLYTFLK-----------PGDRVVSIKDTYGGTN 117 (398)
T ss_pred CChHHHHHH----HHHHHHhCCC---------eEEEeCChHHHHHHHHHHhcC-----------CCCEEEEcCCchHHHH
Confidence 344444444 5678888864 357788888888766655432 5677888888887643
Q ss_pred H----HHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCce
Q 038818 187 K----AAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIW 262 (486)
Q Consensus 187 ~----a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~ 262 (486)
. .+...|+ +++.++ ..|+++++++|++.+ .+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 118 ~~~~~~~~~~Gi---~v~~vd-------~~d~e~l~~~i~~~t------klV~ie~p~NPtg~v~dl~~I~~la~~~gi~ 181 (398)
T PRK08249 118 KIFTEFLPRMGV---DVTLCE-------TGDHEQIEAEIAKGC------DLLYLETPTNPTLKIVDIERLAAAAKKVGAL 181 (398)
T ss_pred HHHHHHHhhCCe---EEEEcC-------CCCHHHHHHhcCCCC------eEEEEECCCCCCCccCCHHHHHHHHHHcCCE
Confidence 3 3556677 666654 358999999987643 4788889999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCc-ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCC
Q 038818 263 VHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD-CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDY 341 (486)
Q Consensus 263 lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 341 (486)
++||++|+.+....+ .. .++|.++.+++|+++++.. .|.+++.+++...+..... .
T Consensus 182 livD~t~a~~~~~~~-l~------~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~-~--------------- 238 (398)
T PRK08249 182 VVVDNTFATPINQNP-LA------LGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYR-E--------------- 238 (398)
T ss_pred EEEECCcCccccCCc-hh------hCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHH-H---------------
Confidence 999999976443211 11 2789999999999987642 3344455554433221110 0
Q ss_pred CCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEec-C-----C-----------CeeEE
Q 038818 342 KDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVA-P-----R-----------NFAVV 404 (486)
Q Consensus 342 ~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~-----~-----------~~~~v 404 (486)
..+-......+|..++ +.+.+..++++..+++..+.+.|+++|.++-+. | | ..+++
T Consensus 239 -----~~g~~~s~~~a~l~l~--~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~ 311 (398)
T PRK08249 239 -----INGATMDPMSAYLILR--GMKTLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGIL 311 (398)
T ss_pred -----hcCCCCCHHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceE
Confidence 0111234456666665 557788889999999999999999998876432 2 1 14578
Q ss_pred EEEeecCCCCCCCCCCccchHHHHHHHHHHHH--hcCcE------EEee-e-----eE-------CC--EeEEEEEecCC
Q 038818 405 CFRVLPSASGLGDGKANEGANELNRKLLESIN--ASGQL------YVSH-G-----MV-------AG--IYFIRFAVGAT 461 (486)
Q Consensus 405 ~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--~~g~~------~~~~-~-----~~-------~~--~~~lR~~~~~~ 461 (486)
+|.+... .+...++.+.|. ..+.- .+.+ . .. .| .+.+|+|++-
T Consensus 312 sf~~~~~-------------~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl- 377 (398)
T PRK08249 312 SFVLKGG-------------MDTVKRLLPKLRYAHRAANLGAVETIYGPARTTSHVENTLEERAALGIPEGLVRISVGI- 377 (398)
T ss_pred EEEEcCC-------------HHHHHHHHHhCCcceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc-
Confidence 8888532 222345555432 11110 1111 1 00 12 4689999952
Q ss_pred CCcHHHHHHHHHHHHHHHHHHh
Q 038818 462 LTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 462 ~tt~~did~~i~~l~~~~~~l~ 483 (486)
||+|.+++.|.+.++.+.
T Consensus 378 ----E~~~dl~~dl~~al~~~~ 395 (398)
T PRK08249 378 ----EDTEDLIADLEQAFAHLE 395 (398)
T ss_pred ----CCHHHHHHHHHHHHHHhh
Confidence 367777877777776543
No 188
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.79 E-value=7.8e-17 Score=160.53 Aligned_cols=311 Identities=14% Similarity=0.099 Sum_probs=198.7
Q ss_pred HHHHHHHHHhhcCC-CccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHc
Q 038818 87 AGFLGEMLSSGFNV-VGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEI 165 (486)
Q Consensus 87 ~~~~~~~l~~~~n~-~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~ 165 (486)
|..+.+.+.+.+.. ....|.. +.. .++++.+++.+|.+.. ..+++|+|+++++..++.+..+
T Consensus 41 ~~~~~~~~~~~~~~~~~~~Y~~-~~~----~~lr~~ia~~~~~~~~------~~I~~t~G~~~~i~~~~~~~~~------ 103 (356)
T PRK04870 41 PAELRAELGERLAEVALNRYPD-PRA----AALKAALRAAMGVPAG------ADVLLGNGSDELIQLLALACAK------ 103 (356)
T ss_pred CHHHHHHHHHHhhccccccCCC-CCH----HHHHHHHHHHhCcCCC------CcEEEcCCHHHHHHHHHHHhcC------
Confidence 33445555554432 2233433 332 3455667777787542 1578888887777655544432
Q ss_pred cccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 166 GRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 166 ~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
+++.|+++..+|..+...++..|+ +++.+|+++ ++.+|+++|++++.... +.+|+++.++|+||.
T Consensus 104 -----~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~--~~~~d~~~l~~~~~~~~-----~~~v~l~~p~NPtG~ 168 (356)
T PRK04870 104 -----PGATVLAPEPGFVMYRMSAKLAGL---EFVGVPLTA--DFTLDLPAMLAAIAEHR-----PALVFLAYPNNPTGN 168 (356)
T ss_pred -----CCCEEEECCCCHHHHHHHHHHcCC---EEEEecCCC--CCCCCHHHHHHHhhcCC-----CCEEEEcCCCCCCCC
Confidence 667788899999999999999999 999999974 57899999999986421 336777889999999
Q ss_pred cCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCc
Q 038818 246 VDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNP 325 (486)
Q Consensus 246 idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~ 325 (486)
+-+.+++.++++..+.++++|++|..+.. ..+...+...+. -.+..++.|++.....+|+++..+ ..+.+......
T Consensus 169 ~~~~~~~~~i~~~~~~~ii~De~y~~~~~--~~~~~~~~~~~~-vi~~~S~SK~~~~GlRiG~~i~~~-~~i~~~~~~~~ 244 (356)
T PRK04870 169 LFDDADVERIIEAAPGLVVVDEAYQPFAG--DSWLPRLARFPN-LLVMRTVSKLGLAGLRLGYLAGHP-AWIAELDKVRP 244 (356)
T ss_pred CCCHHHHHHHHHHCCCEEEEECCchhhcC--cchHHHHhhCCC-EEEEecchhhhhHHHhhhhhhCCH-HHHHHHHHccC
Confidence 99998888888877999999999965321 111111211111 245677899543344578776643 33332211111
Q ss_pred ccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEE
Q 038818 326 EFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF-GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVV 404 (486)
Q Consensus 326 ~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v 404 (486)
.+ . ...+..+++...+ ..+.+++..++..++++++.+.|++++++.+. ++..+.+
T Consensus 245 ~~-----------------~------~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~ 300 (356)
T PRK04870 245 PY-----------------N------VNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALPGVTVF-PSAANFI 300 (356)
T ss_pred CC-----------------c------CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEE
Confidence 00 0 1122222222222 12446777888888999999999988888754 5555655
Q ss_pred EEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 405 CFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 405 ~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
.+++. . ..++.+.+.++|+.+.....+. ..+++|+++. +.+++++++++|+++
T Consensus 301 ~~~~~-~----------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~al~~~ 355 (356)
T PRK04870 301 LVRVP-D----------------AAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG----TPEENAQFLAALKAA 355 (356)
T ss_pred EEECC-C----------------HHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC----CHHHHHHHHHHHHHh
Confidence 66543 1 1346666777887654433332 3569999985 466999999999875
No 189
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.79 E-value=6.2e-17 Score=161.96 Aligned_cols=289 Identities=12% Similarity=0.022 Sum_probs=189.5
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDP 196 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~ 196 (486)
++++.+++++|.+++ ..++|+|+++++...+.+... +++.|+++...|......+...|+
T Consensus 71 ~lr~~ia~~~~~~~~-------~i~~t~G~~~~l~~~~~~l~~-----------~gd~vl~~~p~y~~~~~~~~~~g~-- 130 (367)
T PRK02731 71 ELKAALAEKFGVDPE-------RIILGNGSDEILELLARAYLG-----------PGDEVIYSEHGFAVYPIAAQAVGA-- 130 (367)
T ss_pred HHHHHHHHHhCcCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEecCCHHHHHHHHHHcCC--
Confidence 455667777888654 688899888766444443321 566788888888777777888899
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh--CceEEeeccccchhc
Q 038818 197 KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY--SIWVHVDAAYAGSAC 274 (486)
Q Consensus 197 ~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~--g~~lhvD~a~g~~~~ 274 (486)
+++.+|.+ ++.+|+++|++++++. +.+|+++.++|++|.+-|.++|.++|+.+ |+++++|++|..+..
T Consensus 131 -~~~~~~~~---~~~~~~~~l~~~~~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~ 200 (367)
T PRK02731 131 -KPVEVPAK---DYGHDLDAMLAAVTPR------TRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVR 200 (367)
T ss_pred -eEEEeccc---CCCCCHHHHHHHhCCC------CcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhcc
Confidence 99999885 4689999999988642 34677889999999999999999999875 899999999965432
Q ss_pred cCccchhhhcCCC-CCC-ceeeccccccCC-CCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC
Q 038818 275 ICPEFRHFIDGIE-GAD-SFSLNAHKWFFT-TLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR 351 (486)
Q Consensus 275 ~~~~~~~~~~~~~-~aD-si~~~~hK~l~~-p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~ 351 (486)
....... +..+. .-+ .++.+..|.++. +..+|+++.+++ ... .+...... +.
T Consensus 201 ~~~~~~~-~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~-~~~-~l~~~~~~----------------~~------ 255 (367)
T PRK02731 201 RKDYEDG-LELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPPE-IID-ALNRVRQP----------------FN------ 255 (367)
T ss_pred CcCcccH-HHHHhhcCCEEEEeeehHhhcCcccceeeeeCCHH-HHH-HHHHccCC----------------CC------
Confidence 1111100 11011 112 445577898864 456788877543 322 22111000 00
Q ss_pred CCchHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHH
Q 038818 352 FRALKLWLVLRSFG-VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRK 430 (486)
Q Consensus 352 ~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 430 (486)
...+..+++.+.+. .+.+++..++..++.+++.+.|++. ++.+. ++..+.+.+.+.+.. ...+
T Consensus 256 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~~i~~~~~~--------------~~~~ 319 (367)
T PRK02731 256 VNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAEL-GLEYI-PSVGNFILVDFDDGK--------------DAAE 319 (367)
T ss_pred CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCceEEEEECCCCC--------------CHHH
Confidence 12344445555443 3446677777788888999999887 77765 556677777763211 1345
Q ss_pred HHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 431 LLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 431 l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
+.+.|.++|+.+.....+...+++|+++. +.+++++++++|+++++
T Consensus 320 ~~~~L~~~gI~v~~~~~~~~~~~iRis~~----~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 320 AYQALLKRGVIVRPVAGYGLPNALRITIG----TEEENRRFLAALKEFLA 365 (367)
T ss_pred HHHHHHHCCEEEEeCCCCCCCCeEEEecC----CHHHHHHHHHHHHHHHh
Confidence 67777778875443332222468999983 46699999999998754
No 190
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.79 E-value=1.8e-17 Score=165.50 Aligned_cols=217 Identities=17% Similarity=0.126 Sum_probs=153.6
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ 186 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 186 (486)
..|...++|+ .+++++|.+ ..++++||+.|+..++.+... +++.|+++...|.+..
T Consensus 51 ~np~~~~lE~----~lA~l~g~~---------~~l~~~sG~~Ai~~~l~~ll~-----------~GD~Vlv~~~~y~~~~ 106 (385)
T PRK08574 51 ENPTLRPLEE----ALAKLEGGV---------DALAFNSGMAAISTLFFSLLK-----------AGDRVVLPMEAYGTTL 106 (385)
T ss_pred CCccHHHHHH----HHHHHhCCC---------cEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchhHH
Confidence 3455555554 578888764 357888999998877765532 6777888989998876
Q ss_pred HHHHH---cCCCCCCeEEEecCCCCCcccCHHHHHHHHHH-HHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCce
Q 038818 187 KAAQI---AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDL-DIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIW 262 (486)
Q Consensus 187 ~a~~~---~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~-~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~ 262 (486)
..++. .|+ +++.++ +|+++|++++++ . +.+|++..++|++|.+-|+++|+++|+++|++
T Consensus 107 ~~~~~~~~~g~---~v~~~~--------~d~~~l~~~i~~~~------tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~ 169 (385)
T PRK08574 107 RLLKSLEKFGV---KVVLAY--------PSTEDIIEAIKEGR------TKLVFIETMTNPTLKVIDVPEVAKAAKELGAI 169 (385)
T ss_pred HHHHHhhccCc---EEEEEC--------CCHHHHHHhcCccC------ceEEEEECCCCCCCEecCHHHHHHHHHHcCCE
Confidence 66543 355 555542 367889988865 3 34788899999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccC
Q 038818 263 VHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVD 340 (486)
Q Consensus 263 lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 340 (486)
+++|++|+.+....+ .. .++|.++.++||++++|.. .|+++++++....+..... .+.
T Consensus 170 livD~t~a~~~~~~~-l~------~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~-~~~------------ 229 (385)
T PRK08574 170 LVVDNTFATPLLYRP-LR------HGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWR-RRL------------ 229 (385)
T ss_pred EEEECCCCccccCCh-hh------hCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHH-Hhc------------
Confidence 999999976543222 11 2689999999999998754 4656676665433221110 011
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Q 038818 341 YKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFE 394 (486)
Q Consensus 341 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 394 (486)
+.....+.+|..++ |.+.+..++++..+++.++.+.|+++|.++
T Consensus 230 --------g~~~~p~~a~l~l~--~l~tL~~R~~~~~~na~~la~~L~~~p~v~ 273 (385)
T PRK08574 230 --------GTIMQPFEAYLVLR--GLKTLEVRFERQCRNAMAIAEFLSEHPKVA 273 (385)
T ss_pred --------CCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHcCCCcC
Confidence 11123344555555 557788899999999999999999998875
No 191
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.79 E-value=5.5e-17 Score=146.43 Aligned_cols=297 Identities=12% Similarity=0.077 Sum_probs=203.9
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH
Q 038818 111 ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ 190 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 190 (486)
...+.+.+...++++-|-++ .++.+++-.||..++.+... +++.|+..+..|.|+....+
T Consensus 110 tq~iHk~LE~kiAqfh~rED---------~ilypscfdANag~feail~-----------pedAvfSDeLNhASIIdGir 169 (417)
T KOG1359|consen 110 TQDIHKLLESKIAQFHGRED---------TILYPSCFDANAGAFEAILT-----------PEDAVFSDELNHASIIDGIR 169 (417)
T ss_pred chHHHHHHHHHHHHHhCCCc---------eEEeccccccchHHHHHhcC-----------hhhhhhccccccchhhhhhH
Confidence 35677777788899887654 58888888899766665543 77888888899999988877
Q ss_pred HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeecccc
Q 038818 191 IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYA 270 (486)
Q Consensus 191 ~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g 270 (486)
++.- .+++|+-.|+..+.+..+.. -.+|+.....++.|.+.|+++|.+++++||+.+.+|.+|+
T Consensus 170 Lckr--------------y~h~dv~~l~~~l~~a~k~r--~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHa 233 (417)
T KOG1359|consen 170 LCKR--------------YRHVDVFDLEHCLISACKMR--LKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHA 233 (417)
T ss_pred HHhh--------------hccchhHHHHHHHHHhhhhe--EEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeeccc
Confidence 7642 23778888998887654422 2345555678899999999999999999999999999998
Q ss_pred chhccCccch---hhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHh-cCCcccccCccCCCCCccCCCCccc
Q 038818 271 GSACICPEFR---HFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKAL-STNPEFLRNKASDSKQVVDYKDWQI 346 (486)
Q Consensus 271 ~~~~~~~~~~---~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~-~~~~~y~~~~~~~~~~~~~~~~~~~ 346 (486)
.++... ..+ ..+.-+..+|.+.....|.+++.. |.+..-.+.+ .+.+ +...+|++....
T Consensus 234 Tgf~G~-tGrGt~E~~~vm~~vdiinsTLgKAlGga~--GGyttgp~~l-i~llrqr~RpylFSnsl------------- 296 (417)
T KOG1359|consen 234 TGFFGE-TGRGTAEEFGVMGDVDIINSTLGKALGGAS--GGYTTGPKPL-ISLLRQRSRPYLFSNSL------------- 296 (417)
T ss_pred ceeecC-CCCChHHHhCCCCcceehhhhhhhhhcCCC--CCCccCChhH-HHHHHhcCCceeecCCC-------------
Confidence 765432 222 223334579999999999988542 2333333333 2333 445578876421
Q ss_pred cCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHH
Q 038818 347 TLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANE 426 (486)
Q Consensus 347 ~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~ 426 (486)
..+--..+.+++..+.. -...+.+...+.+++++.++.. ||.+.+.. .+++...+.+ .+
T Consensus 297 ppavV~~a~ka~dllm~-----s~~~i~~~~a~~qrfr~~me~a-GftIsg~~-hPI~pv~lGd--------------a~ 355 (417)
T KOG1359|consen 297 PPAVVGMAAKAYDLLMV-----SSKEIQSRQANTQRFREFMEAA-GFTISGAS-HPICPVMLGD--------------AR 355 (417)
T ss_pred ChhhhhhhHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHhc-CceecCCC-CCccceeccc--------------HH
Confidence 11101123344433321 1345677788899999999875 99987543 4555555443 45
Q ss_pred HHHHHHHHHHhcCcEEEe---eeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 427 LNRKLLESINASGQLYVS---HGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 427 ~~~~l~~~l~~~g~~~~~---~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
+..+..+.|+.+|+.++. |.+..++..+|+.+...+ |+||||++++++.++.+.+
T Consensus 356 lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaH-t~edid~~i~Af~~vgr~~ 413 (417)
T KOG1359|consen 356 LASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAH-TEEDIDRLIEAFSEVGRFL 413 (417)
T ss_pred HHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhc-CHHHHHHHHHHHHHHHHhh
Confidence 667788889999985443 344567889999986544 5569999999999998754
No 192
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=2.1e-17 Score=166.96 Aligned_cols=306 Identities=18% Similarity=0.203 Sum_probs=192.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH--
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA-- 184 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-- 184 (486)
..|....+| +.++++.|.+ ..++++||+.|+..++..... +++.|+++...|..
T Consensus 62 ~~p~~~~Le----~~lA~leg~~---------~al~~~sG~~Ai~~al~~ll~-----------~GD~Vlv~~~~y~~t~ 117 (431)
T PRK08248 62 MNPTTDVFE----KRIAALEGGI---------GALAVSSGQAAITYSILNIAS-----------AGDEIVSSSSLYGGTY 117 (431)
T ss_pred CCchHHHHH----HHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEccCchhhHH
Confidence 345545555 4578888754 468999999998877765532 56678888777754
Q ss_pred --HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCce
Q 038818 185 --LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIW 262 (486)
Q Consensus 185 --~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~ 262 (486)
+...++..|+ +++.++. .|+++++++|++.+ .+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 118 ~~~~~~~~~~Gv---~v~~vd~-------~d~e~l~~ai~~~t------klV~l~sp~NPtG~v~di~~I~~la~~~gi~ 181 (431)
T PRK08248 118 NLFAHTLPKLGI---TVKFVDP-------SDPENFEAAITDKT------KALFAETIGNPKGDVLDIEAVAAIAHEHGIP 181 (431)
T ss_pred HHHHHHHHhCCE---EEEEECC-------CCHHHHHHhcCCCC------eEEEEECCCCCCCcccCHHHHHHHHHHcCCE
Confidence 3345667888 8888865 28899999886543 4788889999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcCCccc--ccCccCCCCCc-
Q 038818 263 VHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALSTNPEF--LRNKASDSKQV- 338 (486)
Q Consensus 263 lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~~~~y--~~~~~~~~~~~- 338 (486)
+++|++++.+....| .. .++|.++.++|||+++|. .+|.+++...... +.....| +..........
T Consensus 182 vIvD~t~a~~~~~~p-l~------~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 251 (431)
T PRK08248 182 LIVDNTFASPYLLRP-IE------HGADIVVHSATKFIGGHGTSIGGVIVDSGKFD---WKGSGKFPGLTEPDPSYHGLV 251 (431)
T ss_pred EEEeCCCCccccCCh-hH------cCCCEEEEcCccccCCCCCceEEEEEeCCccc---cccccccccccCCccccccch
Confidence 999999975433222 11 279999999999999885 3666666433210 0000000 10000000000
Q ss_pred -cC-----------CCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe-cC-----C-
Q 038818 339 -VD-----------YKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIV-AP-----R- 399 (486)
Q Consensus 339 -~~-----------~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~-----~- 399 (486)
.+ ...+....|....+..+|..++ |.+-+..++++..++|..+.+.|+++|.++-+ .| |
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r--gl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~ 329 (431)
T PRK08248 252 YTDAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQ--GLETLHLRMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPS 329 (431)
T ss_pred hhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCcc
Confidence 00 0000111233345556666555 66888899999999999999999999987643 22 0
Q ss_pred -----------CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHH--hcCc-------EEEeee-----eE------
Q 038818 400 -----------NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESIN--ASGQ-------LYVSHG-----MV------ 448 (486)
Q Consensus 400 -----------~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--~~g~-------~~~~~~-----~~------ 448 (486)
..++++|.+.+. .+...++.+.|. ..+. ++..+. ..
T Consensus 330 ~~~~~~~~~~g~gg~~sf~l~~~-------------~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~ 396 (431)
T PRK08248 330 YELAKKYLPKGQGAILTFGIKGG-------------VEAGKKLIDSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQL 396 (431)
T ss_pred HHHHHHhCcCCCceEEEEEecCC-------------HHHHHHHHHhCCcceeccccCCCCeeeeCCCcCccccCCHHHHH
Confidence 145888888532 122345555432 1111 011111 00
Q ss_pred -CC--EeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 449 -AG--IYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 449 -~~--~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
.| .+.+|+|++- ||++.+++.|.++++..
T Consensus 397 ~~gi~~~liRlsvGl-----Ed~~dL~~Dl~~Al~~~ 428 (431)
T PRK08248 397 AAGVTPGLVRLSVGT-----EAIDDILDDLRQAIRQS 428 (431)
T ss_pred hcCCCCCeEEEEecc-----CCHHHHHHHHHHHHHhh
Confidence 12 4679999952 36777888888777643
No 193
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.79 E-value=4.4e-17 Score=162.32 Aligned_cols=304 Identities=16% Similarity=0.103 Sum_probs=191.5
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH
Q 038818 108 SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK 187 (486)
Q Consensus 108 ~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 187 (486)
++...++|++ +++.+|.+ .++.+++||.|+..|+.+..-. +++.|+++..+..+...
T Consensus 24 g~~~~~fE~~----~a~~~g~~---------~~~~~~sgt~Al~~al~~l~~~----------~gdeVi~p~~t~~~~~~ 80 (363)
T PF01041_consen 24 GPYVEEFEKE----FAEYFGVK---------YAVAVSSGTSALHLALRALGLG----------PGDEVIVPAYTFPATAS 80 (363)
T ss_dssp SHHHHHHHHH----HHHHHTSS---------EEEEESSHHHHHHHHHHHTTGG----------TTSEEEEESSS-THHHH
T ss_pred CHHHHHHHHH----HHHHhCCC---------eEEEeCChhHHHHHHHHhcCCC----------cCceEecCCCcchHHHH
Confidence 7777888876 45566643 5789999999999888874322 67899999999999999
Q ss_pred HHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeec
Q 038818 188 AAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDA 267 (486)
Q Consensus 188 a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~ 267 (486)
++..+|+ +++.+++|+ +++.||+++|+++|++.++ +|++++ ..|...|+++|.++|+++|++++.|+
T Consensus 81 ai~~~G~---~pv~~Di~~-~~~~id~~~~~~~i~~~t~------ai~~~h---~~G~~~d~~~i~~~~~~~~i~lIeD~ 147 (363)
T PF01041_consen 81 AILWAGA---EPVFVDIDP-ETLNIDPEALEKAITPKTK------AILVVH---LFGNPADMDAIRAIARKHGIPLIEDA 147 (363)
T ss_dssp HHHHTT----EEEEE-BET-TTSSB-HHHHHHHHHTTEE------EEEEE----GGGB---HHHHHHHHHHTT-EEEEE-
T ss_pred HHHHhcc---EEEEEeccC-CcCCcCHHHHHHHhccCcc------EEEEec---CCCCcccHHHHHHHHHHcCCcEEEcc
Confidence 9999999 999999996 4789999999999998764 566654 57888999999999999999999999
Q ss_pred cccchhccCccchhhhcCCCCCCceeecc--ccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCcc
Q 038818 268 AYAGSACICPEFRHFIDGIEGADSFSLNA--HKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQ 345 (486)
Q Consensus 268 a~g~~~~~~~~~~~~~~~~~~aDsi~~~~--hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 345 (486)
|++.+..... ..-| ...|..++|+ .|.+.+. ..|++++++++...+.......-.... ....+.
T Consensus 148 a~a~g~~~~g----~~~G-~~gd~~~fSf~~~K~i~~g-eGG~v~~~~~~~~~~~~~~~~~g~~~~--------~~~~~~ 213 (363)
T PF01041_consen 148 AQAFGARYKG----RPVG-SFGDIAIFSFHPTKIITTG-EGGAVVTNDPELAERARALRNHGRSRD--------AFRRYR 213 (363)
T ss_dssp TTTTT-EETT----EETT-SSSSEEEEESSTTSSS-SS-S-EEEEESTHHHHHHHHHHTBTTEETS--------ECSTTE
T ss_pred ccccCceeCC----Eecc-CCCCceEecCCCCCCCcCC-CCeeEEecHHHHHHHhhhhhccCcCcc--------cccccc
Confidence 9977653322 1112 1346666665 5888443 468888888766543321111000000 000000
Q ss_pred cc--CCC--CCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCC------eeEEEEEeecCCCCC
Q 038818 346 IT--LSR--RFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRN------FAVVCFRVLPSASGL 415 (486)
Q Consensus 346 ~~--~sr--~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~------~~~v~f~~~~~~~~~ 415 (486)
-+ .+. +...+.+...+..+ +.+.+.+++..++++++.+.|..++++.....+. ...+.+.+.+..
T Consensus 214 ~~~~~g~n~rm~~~~AAigl~QL--~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~--- 288 (363)
T PF01041_consen 214 HELPPGYNFRMSELQAAIGLAQL--KRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEA--- 288 (363)
T ss_dssp ESSSS--B-B-BHHHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCG---
T ss_pred ccccCCcccccHHHHHHHHHHHH--HHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccccc---
Confidence 00 111 23334433344433 6788999999999999999999999887764322 123455554321
Q ss_pred CCCCCccchHHHHHHHHHHHHhcCcEEEeee--eE------CC----------------EeEEEEEecCCCCcHHHHHHH
Q 038818 416 GDGKANEGANELNRKLLESINASGQLYVSHG--MV------AG----------------IYFIRFAVGATLTEDRHVIAA 471 (486)
Q Consensus 416 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~------~~----------------~~~lR~~~~~~~tt~~did~~ 471 (486)
. .....+.+.|.+.|+-..... .+ .. ...|-+- .++..+++|++++
T Consensus 289 -----~----~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP-~~~~lt~edv~~I 358 (363)
T PF01041_consen 289 -----L----ADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLP-IHPRLTEEDVDYI 358 (363)
T ss_dssp -----C----STHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEE-HSTTSCHHHHHHH
T ss_pred -----c----chHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECc-CCCCCCHHHHHHH
Confidence 0 113467778888887422211 00 00 1234444 4788999999999
Q ss_pred HHHHH
Q 038818 472 WKVVQ 476 (486)
Q Consensus 472 i~~l~ 476 (486)
+++|+
T Consensus 359 ~~~ir 363 (363)
T PF01041_consen 359 AEAIR 363 (363)
T ss_dssp HHHHH
T ss_pred hhccC
Confidence 99885
No 194
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.79 E-value=7.7e-17 Score=160.30 Aligned_cols=231 Identities=16% Similarity=0.146 Sum_probs=161.6
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH
Q 038818 108 SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK 187 (486)
Q Consensus 108 ~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 187 (486)
.|....+|+. ++++.|.. .+++++||++|+..++.+... +++.|+++...|.+...
T Consensus 60 npt~~~Le~~----iA~le~~~---------~~~~~~sG~~Ai~~~l~all~-----------~GD~Vvv~~~~Y~~t~~ 115 (394)
T PRK09028 60 TPTHFAFQAA----IVELEGGA---------GTALYPSGAAAISNALLSFLK-----------AGDHLLMVDSCYEPTRD 115 (394)
T ss_pred CchHHHHHHH----HHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEECCCcHHHHH
Confidence 4555566654 55665542 468999999998777765433 66778888888766554
Q ss_pred H----HHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceE
Q 038818 188 A----AQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWV 263 (486)
Q Consensus 188 a----~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~l 263 (486)
. ....|+ ++..++.+ +.+.+++++++++ .+|+++.++|++|.+.|+++|+++|+++|+++
T Consensus 116 l~~~~l~~~Gi---~v~~v~~~-------~~e~l~~~l~~~T------klV~lespsNPtg~v~dl~~I~~la~~~g~~l 179 (394)
T PRK09028 116 LCDKILKGFGI---ETTYYDPM-------IGEGIRELIRPNT------KVLFLESPGSITMEVQDVPTLSRIAHEHDIVV 179 (394)
T ss_pred HHHHhhhhcce---EEEEECCC-------CHHHHHHhcCcCc------eEEEEECCCCCCCcHHHHHHHHHHHHHcCCEE
Confidence 3 344677 77766532 5577888886543 48999999999999999999999999999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCC
Q 038818 264 HVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDY 341 (486)
Q Consensus 264 hvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 341 (486)
+||++|+.+....| .. -++|.+..++|||++++-. .|++ +.++....+... ...+
T Consensus 180 vvD~t~a~p~~~~P-l~------~GaDivv~S~tK~l~Gh~d~~~G~~-~~~~~~~~~l~~-~~~~-------------- 236 (394)
T PRK09028 180 MLDNTWASPINSRP-FE------MGVDISIQAATKYIVGHSDVMLGTA-TANEKHWDQLRE-HSYL-------------- 236 (394)
T ss_pred EEECCccccccCCc-cc------cCceEEEEeCCeEecCCCCEEEEEE-ECCHHHHHHHHH-HHHh--------------
Confidence 99999987653332 21 1899999999999998842 4443 455443322110 0000
Q ss_pred CCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeE-EecC-----C-----------CeeEE
Q 038818 342 KDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFE-IVAP-----R-----------NFAVV 404 (486)
Q Consensus 342 ~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~-----~-----------~~~~v 404 (486)
.|.-..+..+|..++ |.+.+.-+++++.++|..+.+.|+++|.++ |..| | ..+++
T Consensus 237 ------~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~ 308 (394)
T PRK09028 237 ------MGQCTSPDDVYLAMR--GLRTLGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLF 308 (394)
T ss_pred ------cCCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceE
Confidence 111235566676665 667889999999999999999999999875 3333 1 24688
Q ss_pred EEEee
Q 038818 405 CFRVL 409 (486)
Q Consensus 405 ~f~~~ 409 (486)
+|.+.
T Consensus 309 sf~l~ 313 (394)
T PRK09028 309 SFVLK 313 (394)
T ss_pred EEEEC
Confidence 99886
No 195
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.79 E-value=1.1e-16 Score=163.41 Aligned_cols=303 Identities=14% Similarity=0.077 Sum_probs=195.4
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCch
Q 038818 104 NWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHS 183 (486)
Q Consensus 104 ~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~ 183 (486)
.|....+..++.+.+.+|+.+..+. +. ++++|+|+++++..++.+..+ +++.|++..+++.
T Consensus 116 ~Y~~~~g~~~lr~~ia~~~~~~~~~-~~-------~Iiit~G~~~al~~~~~~l~~-----------pgd~Vlv~~P~y~ 176 (431)
T PRK15481 116 LYGDAPVSPELHAWAARWLRDDCPV-AF-------EIDLTSGAIDAIERLLCAHLL-----------PGDSVAVEDPCFL 176 (431)
T ss_pred hcCCcCCCHHHHHHHHHHHhhccCC-cC-------eEEEecCcHHHHHHHHHHhCC-----------CCCEEEEeCCCcH
Confidence 3443334456766777776654332 22 689999999988777666543 6778888999999
Q ss_pred HHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEee-cCCccccccCCch---HHHHHHHHh
Q 038818 184 ALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCAT-VGTTAITTVDPLG---PLCDIAKRY 259 (486)
Q Consensus 184 s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~-~gtt~~G~idpl~---~I~~i~~~~ 259 (486)
.....++..|+ +++.||+++ + .+|+++|++++++. +.+++++ .++||||.+-+.+ +|.++|+++
T Consensus 177 ~~~~~~~~~g~---~~~~v~~~~--~-g~~~~~l~~~~~~~------~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~ 244 (431)
T PRK15481 177 SSINMLRYAGF---SASPVSVDA--E-GMQPEKLERALAQG------ARAVILTPRAHNPTGCSLSARRAAALRNLLARY 244 (431)
T ss_pred HHHHHHHHcCC---eEEeeccCC--C-CCCHHHHHHHHhcC------CCEEEECCCCCCCCCccCCHHHHHHHHHHHHhc
Confidence 99999999999 999999974 2 48999999988642 2345555 8999999998765 999999999
Q ss_pred -CceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCc
Q 038818 260 -SIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQV 338 (486)
Q Consensus 260 -g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~ 338 (486)
++|+++|.+|+-+.. .+ ....+.....--.+..++.|.++...-+|+++.. +.... .+.....+..
T Consensus 245 ~~~~ii~De~Y~~~~~-~~-~~~~~~~~~~~vi~~~SfSK~~~~GlRiG~~i~~-~~~~~-~~~~~~~~~~--------- 311 (431)
T PRK15481 245 PQVLVIIDDHFALLSS-SP-YHSVIPQTTQRWALIRSVSKALGPDLRLAFVASD-SATSA-RLRLRLNSGT--------- 311 (431)
T ss_pred CCceEEecCchhhhcc-CC-CCCCCcCCCCCEEEEeeeccccCCCceeEEEeCC-HHHHH-HHHHHHhccc---------
Confidence 999999999976532 11 1111111111124566789999955668876654 33322 2211000000
Q ss_pred cCCCCccccCCCCCCchHHHHHHHHhch----HHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCC
Q 038818 339 VDYKDWQITLSRRFRALKLWLVLRSFGV----ANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASG 414 (486)
Q Consensus 339 ~~~~~~~~~~sr~~~~l~~~~~l~~~g~----~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~ 414 (486)
. ....+...++...+.. +.+++..+...+..+.+.+.|++. ++++..+.....+.+.+...
T Consensus 312 --------~---~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~~~~p~gg~f~~~~l~~~--- 376 (431)
T PRK15481 312 --------Q---WVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIAIPSPGDGLNLWLPLDTD--- 376 (431)
T ss_pred --------c---CCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCeEEEEEECCCC---
Confidence 0 0122333444444422 235667777788888899999886 67654444444444444321
Q ss_pred CCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeEC---CEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 415 LGDGKANEGANELNRKLLESINASGQLYVSHGMVA---GIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 415 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
...+.+.+.++|+.+..+..+. +..++|+++.. .++++++++++.|.++++
T Consensus 377 -------------~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~--~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 377 -------------SQATALTLAKSGWLVREGEAFGVSAPSHGLRITLST--LNDAEINRLAADLHQALN 430 (431)
T ss_pred -------------HHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCC--CChHHHHHHHHHHHHHhc
Confidence 2345666677888655544432 13589999964 357799999999998764
No 196
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.78 E-value=3.9e-17 Score=163.71 Aligned_cols=212 Identities=17% Similarity=0.161 Sum_probs=149.4
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHH----HHHHHH
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSAL----QKAAQI 191 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~----~~a~~~ 191 (486)
.++.+.++++.|.+. .+++++|+.|+..++. ... +++.|+++...|.+. ...++.
T Consensus 57 ~~le~~lA~l~g~~~---------~v~~~sG~~ai~~~l~-~l~-----------~Gd~Vlv~~~~y~~~~~~~~~~~~~ 115 (390)
T PRK08064 57 EALEDIIAELEGGTK---------GFAFASGMAAISTAFL-LLS-----------KGDHVLISEDVYGGTYRMITEVLSR 115 (390)
T ss_pred HHHHHHHHHHhCCCC---------eEEECCHHHHHHHHHH-HhC-----------CCCEEEEccCccchHHHHHHHHHHH
Confidence 344456888888763 3566777776654443 211 566777888877642 355667
Q ss_pred cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccc
Q 038818 192 AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAG 271 (486)
Q Consensus 192 ~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~ 271 (486)
.|+ +++.++.+ |++++++++++++ .+|+++.++|++|.+.|+++|.++|+++|++++||++|+.
T Consensus 116 ~G~---~v~~v~~~-------d~~~l~~~l~~~t------klV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~ 179 (390)
T PRK08064 116 FGI---EHTFVDMT-------NLEEVAQNIKPNT------KLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLT 179 (390)
T ss_pred cCC---EEEEECCC-------CHHHHHHhcCCCc------eEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCc
Confidence 888 88888753 6888998886543 3789999999999999999999999999999999999976
Q ss_pred hhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCC
Q 038818 272 SACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLS 349 (486)
Q Consensus 272 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~s 349 (486)
+....+ .. -++|.++.++||++++|.+ .|++++++++...+...... ..+
T Consensus 180 ~~~~~~-~~------~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~---------------------~~g 231 (390)
T PRK08064 180 PLLQKP-LD------LGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQN---------------------SFG 231 (390)
T ss_pred ccccCc-hh------hCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHH---------------------hcC
Confidence 543222 11 1689999999999998876 58788877655432211110 011
Q ss_pred CCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Q 038818 350 RRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFE 394 (486)
Q Consensus 350 r~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 394 (486)
....+..+|..+ .|.+-+..++++..+++..+.+.|+++|.+.
T Consensus 232 ~~~~~~~a~l~~--~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~ 274 (390)
T PRK08064 232 AVLGVQDCWLVL--RGLKTLHVRLEHSSETANKIALYLQEHPKVQ 274 (390)
T ss_pred CCCCHHHHHHHH--cccCcHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 112334556544 3556677889999999999999999988663
No 197
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.78 E-value=8.5e-17 Score=161.83 Aligned_cols=292 Identities=18% Similarity=0.207 Sum_probs=191.1
Q ss_pred ccc--cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCC
Q 038818 104 NWM--SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQT 181 (486)
Q Consensus 104 ~~~--~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~ 181 (486)
.|. ..|...++|+. +++++|.+ ..++++||+.|+..++.+... +++.|+++...
T Consensus 57 ~Y~r~~~p~~~~Le~~----iA~~~g~~---------~~l~~~sG~~Ai~~al~~ll~-----------~Gd~Vl~~~~~ 112 (400)
T PRK06234 57 IYSRLGNPTSTEVENK----LALLEGGE---------AAVVAASGMGAISSSLWSALK-----------AGDHVVASDTL 112 (400)
T ss_pred cccCCCCccHHHHHHH----HHHHhCCC---------cEEEEcCHHHHHHHHHHHHhC-----------CCCEEEEecCc
Confidence 355 45666666655 66667753 358899999988777655432 56677888777
Q ss_pred chHH----HHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHH
Q 038818 182 HSAL----QKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAK 257 (486)
Q Consensus 182 H~s~----~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~ 257 (486)
|.+. ...++..|+ +++.++.+ |++++++++++.+ .+|+++.++|++|.+.|+++|+++|+
T Consensus 113 y~~~~~~~~~~~~~~G~---~v~~vd~~-------d~e~l~~~i~~~t------klI~iesP~NPtG~v~dl~~I~~la~ 176 (400)
T PRK06234 113 YGCTFALLNHGLTRYGV---EVTFVDTS-------NLEEVRNALKANT------KVVYLETPANPTLKVTDIKAISNIAH 176 (400)
T ss_pred cchHHHHHHHHHhhCCe---EEEEECCC-------CHHHHHHHhccCC------eEEEEECCCCCCCCcCCHHHHHHHHH
Confidence 7553 345577888 88888642 7899999987643 47888999999999999999999999
Q ss_pred Hh--CceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccC
Q 038818 258 RY--SIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKAS 333 (486)
Q Consensus 258 ~~--g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~ 333 (486)
++ |+++++|++|+.+....+ . . .++|.++.+++|+++++.. .|+++.++ +...........+.
T Consensus 177 ~~~~~i~livDea~~~~~~~~~-l-----~-~g~Divv~S~sK~l~g~g~~~gG~v~~~~-~~~~~l~~~~~~~~----- 243 (400)
T PRK06234 177 ENNKECLVFVDNTFCTPYIQRP-L-----Q-LGADVVVHSATKYLNGHGDVIAGFVVGKE-EFINQVKLFGIKDM----- 243 (400)
T ss_pred hcCCCCEEEEECCCCchhcCCc-h-----h-hCCcEEEeeccccccCCCCceeEEEEecH-HHHHHHHHHHHHHh-----
Confidence 97 999999999976543221 1 1 1689999999999997653 46666654 33322111000000
Q ss_pred CCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEec-C-----C--------
Q 038818 334 DSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVA-P-----R-------- 399 (486)
Q Consensus 334 ~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~-----~-------- 399 (486)
.+....+...|..++ |.+.+..++++..+++.++.+.|+++|.+.-+. | |
T Consensus 244 --------------~g~~l~p~~a~l~~~--~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~ 307 (400)
T PRK06234 244 --------------TGSVIGPFEAFLIIR--GMKTLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQ 307 (400)
T ss_pred --------------cCCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHh
Confidence 011234455565555 456677888999999999999999998775432 2 1
Q ss_pred ---CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcE--------EEe-ee-----eE-------CC--EeE
Q 038818 400 ---NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQL--------YVS-HG-----MV-------AG--IYF 453 (486)
Q Consensus 400 ---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~--------~~~-~~-----~~-------~~--~~~ 453 (486)
..++++|.+.+. .+...++.+.|.--+.. .+. +. .+ .| .+.
T Consensus 308 ~~~~g~l~s~~l~~~-------------~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l 374 (400)
T PRK06234 308 MSLPGAMISFELKGG-------------VEEGKVVMNNVKLATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGL 374 (400)
T ss_pred CCCCCceEEEEecCc-------------HHHHHHHHHhCCcceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCe
Confidence 245788888632 12234566655322211 111 10 00 11 468
Q ss_pred EEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 454 IRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 454 lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
+|+|++- ||.+.+++.|.++++.+
T Consensus 375 ~R~svGl-----E~~~dl~~dl~~al~~~ 398 (400)
T PRK06234 375 VRLSVGL-----EDVDDIIADLKQALDLI 398 (400)
T ss_pred EEEEeCC-----CCHHHHHHHHHHHHHHH
Confidence 9999953 26777788887777654
No 198
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=3.2e-17 Score=163.04 Aligned_cols=283 Identities=10% Similarity=0.026 Sum_probs=183.6
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCC-eEEEecCCCchHHHHHHHHcCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISR-LVVYGSDQTHSALQKAAQIAGID 195 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~a~~~~G~g 195 (486)
++++.+++.+|++++ .+++|+|+++++..++.+... ++ +.|+++..++..+...++..|+
T Consensus 64 ~Lr~aia~~~~~~~~-------~I~it~Gs~~~i~~~~~~~~~-----------~g~d~vlv~~P~y~~y~~~~~~~g~- 124 (354)
T PRK04635 64 ELINAYSAYAGVAPE-------QILTSRGADEAIELLIRAFCE-----------PGQDSIACFGPTYGMYAISAETFNV- 124 (354)
T ss_pred HHHHHHHHHhCcCHH-------HEEEeCCHHHHHHHHHHHhcC-----------CCCCeEEEcCCChHHHHHHHHHcCC-
Confidence 345666777898776 789999999988766655432 44 6788888888888888999999
Q ss_pred CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh-CceEEeeccccchhc
Q 038818 196 PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY-SIWVHVDAAYAGSAC 274 (486)
Q Consensus 196 ~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~-g~~lhvD~a~g~~~~ 274 (486)
+++.+|+++ ++.+|++.+++ + +. +.+|+++.++||||.+-|.+++.++++.. ++++++|++|..+..
T Consensus 125 --~v~~v~~~~--~~~~~~~~l~~-~-~~------~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~ 192 (354)
T PRK04635 125 --GVKALPLTA--DYQLPLDYIEQ-L-DG------AKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCP 192 (354)
T ss_pred --EEEEEecCC--CCCCCHHHHHh-c-cC------CCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhcc
Confidence 999999974 46899998873 3 22 34788889999999999999999998863 799999999965431
Q ss_pred cCccchhhhcCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCC
Q 038818 275 ICPEFRHFIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFR 353 (486)
Q Consensus 275 ~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~ 353 (486)
. ..........+.. .+..+++|+++ .+..+|+++.++ +..........+|- ..
T Consensus 193 ~-~s~~~~~~~~~~~-iv~~S~SK~~~l~GlRlG~~i~~~-~~~~~l~~~~~~~~-----------------------~~ 246 (354)
T PRK04635 193 E-YSVADLLASYPNL-VVLRTLSKAFALAGARCGFTLANE-ELIEILMRVIAPYP-----------------------VP 246 (354)
T ss_pred C-cchHHHHhhCCCE-EEEechHHHhhhhHHHHhhhhCCH-HHHHHHHhhcCCCC-----------------------CC
Confidence 1 1111111111111 35667899987 445578877643 33332111111110 01
Q ss_pred chHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHH
Q 038818 354 ALKLWLVLRSF---GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRK 430 (486)
Q Consensus 354 ~l~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 430 (486)
.....+++..+ +.+.+++..++..+.++++.+.|++++++++. ++..+.+.+++.. ..+
T Consensus 247 ~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~g~f~~~~~~~-----------------~~~ 308 (354)
T PRK04635 247 LPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVL-EGNGNYVLAKFDD-----------------VDA 308 (354)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCcEEEEECCC-----------------HHH
Confidence 11222233333 33445666677777888999999988667765 4555554444421 124
Q ss_pred HHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 431 LLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 431 l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
+.+.+.++|+.+.........+++|+++. +++|+++++++|++.
T Consensus 309 ~~~~l~~~gv~v~~~~~~~~~~~lRis~~----~~e~~~~l~~al~~~ 352 (354)
T PRK04635 309 VFKALWDAGIVARAYKDPRLANCIRFSFS----NRAETDKLIGLIRNQ 352 (354)
T ss_pred HHHHHHHCCEEEEECCCCCCCCeEEEEeC----CHHHHHHHHHHHHHh
Confidence 56666677875432221123568999974 567999999999763
No 199
>PLN02242 methionine gamma-lyase
Probab=99.78 E-value=1.3e-16 Score=160.64 Aligned_cols=223 Identities=15% Similarity=0.133 Sum_probs=151.2
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH
Q 038818 108 SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK 187 (486)
Q Consensus 108 ~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 187 (486)
.|...++| +.+++++|.+. .++++||++|+..++.+... +++.|+++...+.....
T Consensus 75 ~Pt~~~LE----~~lA~l~g~~~---------~l~~~sG~~Ai~~al~al~~-----------~GD~Vl~~~~~Y~~~~~ 130 (418)
T PLN02242 75 NPTVLNLG----RQMAALEGTEA---------AYCTASGMSAISSVLLQLCS-----------SGGHVVASNTLYGGTHA 130 (418)
T ss_pred ChhHHHHH----HHHHHHhCCCe---------EEEEccHHHHHHHHHHHHhC-----------CCCEEEEcCCcHHHHHH
Confidence 45445555 55788888753 57899999999888776643 66778888877666554
Q ss_pred HH-----HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCce
Q 038818 188 AA-----QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIW 262 (486)
Q Consensus 188 a~-----~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~ 262 (486)
.+ +..|+ +++.++. .|+++|++++++. .+.+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 131 ~~~~~~~~~~G~---~~~~~d~-------~d~e~l~~~i~~~-----~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~ 195 (418)
T PLN02242 131 LLAHFLPRKCNI---TTTFVDI-------TDLEAVKKAVVPG-----KTKVLYFESISNPTLTVADIPELARIAHEKGVT 195 (418)
T ss_pred HHHHhhhhccCc---eEEEcCC-------CCHHHHHHhcCcC-----CCEEEEEecCCCCCCcccCHHHHHHHHHHhCCE
Confidence 43 34566 6665543 2899999988652 134788999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccC
Q 038818 263 VHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVD 340 (486)
Q Consensus 263 lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 340 (486)
++||.+|+. ..+.+ .. + ++|.++.+++|+++++.. +|+++ .+++.............
T Consensus 196 livDea~~~-~~~~~--~~----~-g~divv~S~SK~l~g~g~~~gG~iv-~~~~li~~l~~~~~~~~------------ 254 (418)
T PLN02242 196 VVVDNTFAP-MVLSP--AR----L-GADVVVHSISKFISGGADIIAGAVC-GPAELVNSMMDLHHGAL------------ 254 (418)
T ss_pred EEEECCCCc-cCCCH--HH----c-CCcEEEEeCccccCCCCCceEEEEE-cCHHHHHHHHHHhhhhh------------
Confidence 999999954 32221 11 1 589999999999987754 35555 44444332221111000
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC
Q 038818 341 YKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP 398 (486)
Q Consensus 341 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 398 (486)
. ..+....+..+|..+ .+.+.+..++++..++++++.+.|+++ ++++..|
T Consensus 255 ----~-~~g~~~~~~~A~l~~--~~l~tl~~r~~~~~~~a~~la~~L~~~-~~~V~yP 304 (418)
T PLN02242 255 ----M-LLGPTMNPKVAFELS--ERLPHLSLRMKEHCRRAMEYAKRMKEL-GLKVIYP 304 (418)
T ss_pred ----h-ccCCCCCHHHHHHHH--cCCCcHHHHHHHHHHHHHHHHHHHHhC-CCEEECC
Confidence 0 011122333444444 455677778889999999999999998 5777643
No 200
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.78 E-value=1.8e-16 Score=165.33 Aligned_cols=292 Identities=13% Similarity=0.093 Sum_probs=187.2
Q ss_pred HHHHHHhhhcCCCcCCCCCCcceecCCCCCH-----HHHHHHH-HHh-hcCCC-ccccccChhhHHHHHHHHHHHHHHcC
Q 038818 56 ILQDVQQHIVPGITHWQSPYYFAYFPSSGSI-----AGFLGEM-LSS-GFNVV-GFNWMSSPAATELENIVMDWLGEMLK 127 (486)
Q Consensus 56 il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~-----~~~~~~~-l~~-~~n~~-~~~~~~~~~~~~le~~~~~~l~~l~g 127 (486)
+++.|.+....+...|+.|.+-|-..-...+ ....++- +.. .-+.. ....-..|.....|.+ +..+++||
T Consensus 111 ~~~aL~~y~~~~~~sfh~PGHkgG~~f~~~p~g~~f~~f~Gen~fr~Dlte~~~~LddL~~~eG~i~eAq--~~AA~~fg 188 (720)
T PRK13578 111 FFDTLTDYVEMGNSTFDCPGHQGGQFFRKHPAGRQFYDFFGENLFRADMCNADVKLGDLLIHEGAAKDAQ--KHAAKVFN 188 (720)
T ss_pred HHHHHHHHHhCCCceeeCCcCCCCCCCCcChhhhHHHHHhhhhhhhhhcccccccCCCCCCCChHHHHHH--HHHHHHhC
Confidence 5566666666777788888665422100111 2223221 111 11111 1122233333444444 88999999
Q ss_pred CCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHH-HHHcCCCCCCeEEEecCC
Q 038818 128 LPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKA-AQIAGIDPKNFRAIKTTK 206 (486)
Q Consensus 128 ~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a-~~~~G~g~~~v~~v~~d~ 206 (486)
.+.+| ++++|+|.+|..++.++.. +++.|++...+|-|+..+ +.+.|+ ..++++..-
T Consensus 189 Ad~ty--------FlvNGTS~gn~a~i~a~~~-----------~Gd~VLvdRN~HKSv~hgaLiLsGa---~PVYl~P~~ 246 (720)
T PRK13578 189 ADKTY--------FVLNGTSASNKVVTNALLT-----------PGDLVLFDRNNHKSNHHGALIQAGA---TPVYLETAR 246 (720)
T ss_pred CCceE--------EEeCChhHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHHcCC---eEEEeeccc
Confidence 98875 8899999999887777665 788999999999999996 889999 999887543
Q ss_pred CCC---cccCH-----HHHHHHHHHH-HH--CCCcc-EEEEeecCCccccccCCchHHHHH-HHHhCceEEeeccccchh
Q 038818 207 SSS---FTLTP-----ESLQAAIDLD-IQ--AGLIP-LFLCATVGTTAITTVDPLGPLCDI-AKRYSIWVHVDAAYAGSA 273 (486)
Q Consensus 207 ~~~---~~~d~-----~~L~~~l~~~-~~--~g~~p-~~vv~~~gtt~~G~idpl~~I~~i-~~~~g~~lhvD~a~g~~~ 273 (486)
+.. +.+++ +.++++|++. .+ +..+| .++++|.+| ..|.+-++++|+++ |+.++ +||||+|||+.+
T Consensus 247 n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pT-YdG~~ydi~~I~~~~~h~~~-~llvDEAhgah~ 324 (720)
T PRK13578 247 NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGT-YDGTIYNARQVVDKIGHLCD-YILFDSAWVGYE 324 (720)
T ss_pred cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCC-CcceeecHHHHHHHhhccCC-cEEEeCcchhhh
Confidence 221 23454 4599998865 11 12244 567777765 57999999999998 78888 999999999988
Q ss_pred ccCccchhhh--cCCCCCC----ceeeccccccCCCCcceEEEeeCch-----------HHHHHhcCCcccccCccCCCC
Q 038818 274 CICPEFRHFI--DGIEGAD----SFSLNAHKWFFTTLDCCCLWVKNPN-----------ALIKALSTNPEFLRNKASDSK 336 (486)
Q Consensus 274 ~~~~~~~~~~--~~~~~aD----si~~~~hK~l~~p~~~g~~~~~~~~-----------~~~~~~~~~~~y~~~~~~~~~ 336 (486)
.+.|.++... ..-.++| .++-|.||.+.+--+++++.+++.. .+.+++.
T Consensus 325 ~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~al~-------------- 390 (720)
T PRK13578 325 QFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNNAFM-------------- 390 (720)
T ss_pred ccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHHHHH--------------
Confidence 8877543321 1113789 9999999999988889999987642 2222221
Q ss_pred CccCCCCccccCCCCCCchHHHHHH----HHh-chHHHHHHHHHHHHHHHHHHHHH-hCCCCeEEecC
Q 038818 337 QVVDYKDWQITLSRRFRALKLWLVL----RSF-GVANLRNFLRSHVRMAQLFQELV-GGDNRFEIVAP 398 (486)
Q Consensus 337 ~~~~~~~~~~~~sr~~~~l~~~~~l----~~~-g~~g~~~~~~~~~~~a~~l~~~L-~~~~~~~~~~~ 398 (486)
..+.|.+. ..+.+++ +.+ +..| ++++++..+++..+++.| +.+++|+++.+
T Consensus 391 --------m~qSTSPs--Y~LmASLDva~~~m~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p 447 (720)
T PRK13578 391 --------LHASTSPF--YPLFAALDVNAKMHEGESG-RRLWMECVKLGIEARKLILARCKLIRPFIP 447 (720)
T ss_pred --------HHcCCChH--HHHHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHhCCCeeeccc
Confidence 01111111 1111221 112 2223 457778888888898888 77788888743
No 201
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.78 E-value=5.4e-17 Score=162.10 Aligned_cols=286 Identities=15% Similarity=0.149 Sum_probs=186.3
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH-HcCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ-IAGID 195 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~-~~G~g 195 (486)
.+.++++++.|.+ .+++++||++|+..++.+... +++.|+++...|.+....+. ..+.+
T Consensus 56 ~L~~~lA~l~g~~---------~~i~~~sg~~Ai~~~l~~l~~-----------~GD~Vl~~~~~y~~~~~~~~~~~~~~ 115 (386)
T PRK08045 56 VVQRALAELEGGA---------GAVLTNTGMSAIHLVTTVFLK-----------PGDLLVAPHDCYGGSYRLFDSLAKRG 115 (386)
T ss_pred HHHHHHHHHhCCC---------eEEEECCHHHHHHHHHHHHcC-----------CCCEEEEcCCCcHHHHHHHHHHHhhC
Confidence 3446678888742 478999999888776665432 66778888888875443322 22221
Q ss_pred CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhcc
Q 038818 196 PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACI 275 (486)
Q Consensus 196 ~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~ 275 (486)
.-++..++ ..|++++++++++.+ .+|+++.++|++|.+-|+++|.++|+++|++++||++|+.+...
T Consensus 116 gi~v~~vd-------~~d~e~l~~~l~~~t------klV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~ 182 (386)
T PRK08045 116 CYRVLFVD-------QGDEQALRAALAEKP------KLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQ 182 (386)
T ss_pred CeEEEEeC-------CCCHHHHHHhcccCC------eEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC
Confidence 11455442 358999999886543 47888999999999999999999999999999999999765432
Q ss_pred CccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCC
Q 038818 276 CPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFR 353 (486)
Q Consensus 276 ~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~ 353 (486)
.+ .. .++|.++.++|||++++.+ .|++++++++...+.. ....++ +-...
T Consensus 183 ~p-l~------~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~-~~~~~~--------------------g~~~~ 234 (386)
T PRK08045 183 NP-LA------LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELA-WWANNI--------------------GVTGG 234 (386)
T ss_pred Cc-hh------hCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHH-HHHHhc--------------------CCCCC
Confidence 22 11 2789999999999998775 6766666665433211 111111 11134
Q ss_pred chHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe-cC-----C-----------CeeEEEEEeecCCCCCC
Q 038818 354 ALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIV-AP-----R-----------NFAVVCFRVLPSASGLG 416 (486)
Q Consensus 354 ~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~-----~-----------~~~~v~f~~~~~~~~~~ 416 (486)
++..|+.++.+ +.+..++++..+++..+.+.|+++|.++-+ .| | ..++++|.+...
T Consensus 235 p~~~~l~~rgl--~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~----- 307 (386)
T PRK08045 235 AFDSYLLLRGL--RTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGD----- 307 (386)
T ss_pred HHHHHHHHhhh--ccHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCc-----
Confidence 56667777644 668899999999999999999999988543 22 1 145788888532
Q ss_pred CCCCccchHHHHHHHHHHHHh--cCc-------EEEeee-----eE-------CC--EeEEEEEecCCCCcHHHHHHHHH
Q 038818 417 DGKANEGANELNRKLLESINA--SGQ-------LYVSHG-----MV-------AG--IYFIRFAVGATLTEDRHVIAAWK 473 (486)
Q Consensus 417 ~~~~~~~~~~~~~~l~~~l~~--~g~-------~~~~~~-----~~-------~~--~~~lR~~~~~~~tt~~did~~i~ 473 (486)
.+...++.+.|.- .+. +...+. .. .| .+.+|+|++- ||+|.+++
T Consensus 308 --------~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl-----E~~~dl~~ 374 (386)
T PRK08045 308 --------EQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI-----EDGEDLIA 374 (386)
T ss_pred --------HHHHHHHHHhccceeEeccCCCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCc-----CCHHHHHH
Confidence 1223455554421 111 011111 00 12 4689999952 26777788
Q ss_pred HHHHHHHHHh
Q 038818 474 VVQEKLDGIL 483 (486)
Q Consensus 474 ~l~~~~~~l~ 483 (486)
.|.+.++...
T Consensus 375 dl~~al~~~~ 384 (386)
T PRK08045 375 DLENGFRAAN 384 (386)
T ss_pred HHHHHHHHhh
Confidence 8877776543
No 202
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=1.2e-16 Score=160.23 Aligned_cols=288 Identities=15% Similarity=0.068 Sum_probs=190.5
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDP 196 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~ 196 (486)
++++.+++.+|++++ +.++|+|+++++..++.+... +++.|+++..++......++..|+
T Consensus 90 ~lr~~ia~~~~~~~~-------~I~~t~Ga~~~i~~~~~~~~~-----------~gd~Vlv~~P~y~~y~~~~~~~g~-- 149 (380)
T PLN03026 90 RLRAALAEDSGLESE-------NILVGCGADELIDLLMRCVLD-----------PGDKIIDCPPTFGMYVFDAAVNGA-- 149 (380)
T ss_pred HHHHHHHHHhCcChh-------hEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHHHcCC--
Confidence 466778888888765 688999999888766554432 567788888888777788888999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccC
Q 038818 197 KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACIC 276 (486)
Q Consensus 197 ~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~ 276 (486)
+++.+|.++ ++.+|+++|+++++.. .+.+|+++.++|+||.+-|.+++.++++.. +++++|++|..+.. .
T Consensus 150 -~~~~v~~~~--~~~~d~~~l~~~~~~~-----~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~-~ 219 (380)
T PLN03026 150 -EVIKVPRTP--DFSLDVPRIVEAVETH-----KPKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFST-Q 219 (380)
T ss_pred -EEEEeecCC--CCCcCHHHHHHHHhcc-----CCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcC-C
Confidence 999999864 5789999999988421 134788889999999999999999999865 99999999965432 1
Q ss_pred ccchhhhcCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCch
Q 038818 277 PEFRHFIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRAL 355 (486)
Q Consensus 277 ~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l 355 (486)
......+... .-..+..++.|.++ .....|+++.. +..+........+| ....+
T Consensus 220 ~~~~~~~~~~-~~viv~~SfSK~~glaGlRiGy~~~~-~~~i~~l~~~~~~~-----------------------~~~~~ 274 (380)
T PLN03026 220 ESRMKWVKKY-DNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQPY-----------------------NVSVA 274 (380)
T ss_pred cchHHHHHhC-CCEEEEecchHhhcCccccceeeecC-HHHHHHHHHhcCCC-----------------------CCCHH
Confidence 1111111111 12356678899997 44567777654 33333222111111 01223
Q ss_pred HHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHH
Q 038818 356 KLWLVLRSFG-VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLES 434 (486)
Q Consensus 356 ~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 434 (486)
...++...+. .+.+++..+...+.++++.+.|++++++++ .++..+.+.+.+.+.. + ..++.+.
T Consensus 275 ~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~~------------~--~~~~~~~ 339 (380)
T PLN03026 275 AEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFLEP-YPSDANFILCRVTSGR------------D--AKKLKED 339 (380)
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCeE-CCCCCeEEEEECCCCC------------C--HHHHHHH
Confidence 3333444332 244667777778888899999998865554 4555666666654210 1 2356777
Q ss_pred HHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 435 INASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 435 l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
|.++|+.+.......+..++|+++. +.+++++++++|+++
T Consensus 340 l~~~gI~v~~~~~~~~~~~lRis~~----~~~~~~~l~~al~~~ 379 (380)
T PLN03026 340 LAKMGVMVRHYNSKELKGYIRVSVG----KPEHTDALMEALKQL 379 (380)
T ss_pred HHHCCeEEEECCCCCCCCEEEEecC----CHHHHHHHHHHHHHh
Confidence 7778875433322233568999985 456899999998763
No 203
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=9.7e-17 Score=160.62 Aligned_cols=288 Identities=12% Similarity=0.071 Sum_probs=188.4
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDP 196 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~ 196 (486)
.+++.+++.+|++.+ +.++|+|+++++...+.+... +++.|++...+|......++..|+
T Consensus 75 ~lr~~ia~~~~~~~~-------~i~~t~G~~~~l~~~~~~~~~-----------~gd~vli~~P~y~~~~~~~~~~g~-- 134 (371)
T PRK05166 75 ALREAIAARTGVPAD-------RIILGNGSEDLIAVICRAVLR-----------PGDRVVTLYPSFPLHEDYPTMMGA-- 134 (371)
T ss_pred HHHHHHHHHhCcCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHHHcCC--
Confidence 466777888888654 789999998887655544322 667788888999888889999999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHH--hCceEEeeccccchhc
Q 038818 197 KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKR--YSIWVHVDAAYAGSAC 274 (486)
Q Consensus 197 ~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~--~g~~lhvD~a~g~~~~ 274 (486)
+++.+|+++ ++.+|++++++++++.+ .+|+++.++|+||.+-|.+++.++++. +++++++|++|+.+.
T Consensus 135 -~~~~v~~~~--~~~~~~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~- 204 (371)
T PRK05166 135 -RVERVTVTP--DLGFDLDALCAAVARAP------RMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYA- 204 (371)
T ss_pred -eEEEeecCC--CCCCCHHHHHHhhhcCC------CEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhc-
Confidence 999999975 46899999999886543 367789999999999988777777664 489999999997654
Q ss_pred cCccchhhhcCCC-CC--CceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCC
Q 038818 275 ICPEFRHFIDGIE-GA--DSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSR 350 (486)
Q Consensus 275 ~~~~~~~~~~~~~-~a--Dsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr 350 (486)
........+..+. .- -.+..++.|.++ ....+|++++.++............+ .
T Consensus 205 ~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~~~~-----------------~----- 262 (371)
T PRK05166 205 AGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVRTPF-----------------N----- 262 (371)
T ss_pred CCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhccCC-----------------C-----
Confidence 2111111111111 11 245667899998 55568887776665433221111100 0
Q ss_pred CCCchHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHH
Q 038818 351 RFRALKLWLVLRSF-GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNR 429 (486)
Q Consensus 351 ~~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 429 (486)
...+...+++..+ ..+.+++..+...+..+++.+.|++. ++++. ++..+.+.+.... + ..
T Consensus 263 -~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-p~~g~fl~~~~~~--------------~--~~ 323 (371)
T PRK05166 263 -VNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEM-GYRIA-PSRANFLFFDARR--------------P--AS 323 (371)
T ss_pred -CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-cCeeC-CCcCCEEEEeCCC--------------C--HH
Confidence 1122222233332 23456777777888888999999887 77653 5554444443221 1 24
Q ss_pred HHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 430 KLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 430 ~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
++.+.+.++|+.+..........++|+++. +.++.++++++|+++.
T Consensus 324 ~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~----~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 324 AVAEALLRQGVIVKPWKQPGFETFIRVSIG----SPEENDHFVAALDKVL 369 (371)
T ss_pred HHHHHHHHCCeEEecCCCCCCCCeEEEEcC----CHHHHHHHHHHHHHHh
Confidence 567777778875443322233678999985 3557888888887764
No 204
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=3e-16 Score=156.99 Aligned_cols=295 Identities=16% Similarity=0.065 Sum_probs=194.6
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHH
Q 038818 109 PAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKA 188 (486)
Q Consensus 109 ~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a 188 (486)
+....+.+.+.+|+.+.+|.+.+ ..++++|+|+++++..++.+..+ +++.|++...++..+..+
T Consensus 65 ~g~~~lr~aia~~~~~~~~~~~~-----~~~I~it~G~~~~l~~~~~~~~~-----------~gd~v~v~~P~y~~~~~~ 128 (368)
T PRK03317 65 RDAVALRADLAAYLTAQTGVGLT-----VENVWAANGSNEILQQLLQAFGG-----------PGRTALGFVPSYSMHPII 128 (368)
T ss_pred CchHHHHHHHHHHhhhhccCCCC-----hhhEEECCCHHHHHHHHHHHhcC-----------CCCEEEEeCCChHHHHHH
Confidence 45577888888999888776432 12788999999888776666543 667788888899888888
Q ss_pred HHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeecc
Q 038818 189 AQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAA 268 (486)
Q Consensus 189 ~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a 268 (486)
++..|. +++.+|.++ ++.+|+++|++++++.. +.+|+++.++|++|.+-+.+++.++|+.+++++++|.+
T Consensus 129 ~~~~g~---~~~~~~~~~--~~~~d~~~l~~~~~~~~-----~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~ 198 (368)
T PRK03317 129 ARGTHT---EWVEGPRAA--DFTLDVDAAVAAIAEHR-----PDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEA 198 (368)
T ss_pred HHhcCC---eeEEcccCC--CCCCCHHHHHHHHhccC-----CCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCC
Confidence 888888 888887653 57899999999987431 23577788999999999999999999999999999999
Q ss_pred ccchhccC-ccchhhhcCCCCCCc-eeeccccccCC-CCcceEEEeeCchHHHHHhcC-CcccccCccCCCCCccCCCCc
Q 038818 269 YAGSACIC-PEFRHFIDGIEGADS-FSLNAHKWFFT-TLDCCCLWVKNPNALIKALST-NPEFLRNKASDSKQVVDYKDW 344 (486)
Q Consensus 269 ~g~~~~~~-~~~~~~~~~~~~aDs-i~~~~hK~l~~-p~~~g~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~ 344 (486)
|+.+.... +........ .-+. +..++.|.++. ...+|+++.. +.... .+.. ...+
T Consensus 199 y~~~~~~~~~~~~~~~~~--~~~~i~~~SfSK~~g~~GlRiG~~~~~-~~~~~-~l~~~~~~~----------------- 257 (368)
T PRK03317 199 YAEFRRSGTPSALTLLPE--YPRLVVSRTMSKAFAFAGGRLGYLAAA-PAVVD-ALRLVRLPY----------------- 257 (368)
T ss_pred chhhcccCCcCHHHHHHh--CCCEEEEEechhhhccchhhhhhhhCC-HHHHH-HHHhcCCCC-----------------
Confidence 98643211 111111111 1133 44588999974 4556777764 33332 2211 1111
Q ss_pred cccCCCCCCchHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccc
Q 038818 345 QITLSRRFRALKLWLVLRSFG-VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEG 423 (486)
Q Consensus 345 ~~~~sr~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~ 423 (486)
....+...++...+. .+.+.+.+++..+..+++.+.|++. ++++. ++..+.+.|...+.
T Consensus 258 ------~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~------------ 317 (368)
T PRK03317 258 ------HLSAVTQAAARAALRHADELLASVAALRAERDRVVAWLREL-GLRVA-PSDANFVLFGRFAD------------ 317 (368)
T ss_pred ------CCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEeC-CCCCcEEEEeccCC------------
Confidence 012233333333331 2344555666777788888889886 77764 45555555422111
Q ss_pred hHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 424 ANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 424 ~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
...+.+.+.++|+.+ .+. ...+++|+++. +.+++++++++|+++.+.
T Consensus 318 ----~~~~~~~l~~~Gv~v-~~~--~~~~~iRi~~~----~~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 318 ----RHAVWQGLLDRGVLI-RDV--GIPGWLRVTIG----TPEENDAFLAALAEVLAT 364 (368)
T ss_pred ----HHHHHHHHHHCCEEE-EeC--CCCCeEEEecC----CHHHHHHHHHHHHHHHHH
Confidence 235667777788754 332 22468999974 456899999999988754
No 205
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=1.5e-16 Score=158.60 Aligned_cols=285 Identities=12% Similarity=0.057 Sum_probs=186.8
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDP 196 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~ 196 (486)
++++.+++.+|.+.+ ..++|+|+++++..++.+..+ +++.|+++..++..+...+...|.
T Consensus 68 ~lr~~ia~~~~~~~~-------~i~~t~G~~~~l~~~~~~~~~-----------~gd~v~~~~p~y~~~~~~~~~~g~-- 127 (359)
T PRK03158 68 ELRTKVAKHLGVDEE-------QLLFGAGLDEVIQMISRALLN-----------PGTNTVMAEPTFSQYRHNAIIEGA-- 127 (359)
T ss_pred HHHHHHHHHhCCCHH-------HEEECCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCHHHHHHHHHHcCC--
Confidence 345566666777654 689999998887655444322 567788888899888889999999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHH--hCceEEeeccccchhc
Q 038818 197 KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKR--YSIWVHVDAAYAGSAC 274 (486)
Q Consensus 197 ~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~--~g~~lhvD~a~g~~~~ 274 (486)
+++.+|++ ++.+|++++++++++. +.+|+++.++|+||.+-|.++|.++++. +|+++++|++|..+..
T Consensus 128 -~~~~~~~~---~~~~d~~~l~~~~~~~------~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~ 197 (359)
T PRK03158 128 -EVREVPLK---DGGHDLEAMLKAIDEQ------TKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVT 197 (359)
T ss_pred -eEEEEecC---CCCcCHHHHHHhcCCC------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcC
Confidence 99999987 3579999999887543 2367778999999999999999999887 5999999999976543
Q ss_pred cCc--cchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC
Q 038818 275 ICP--EFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR 351 (486)
Q Consensus 275 ~~~--~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~ 351 (486)
... .....+... .-..+..++.|.++.| ..+|+++..+ +...........+ .
T Consensus 198 ~~~~~~~~~~~~~~-~~vi~~~S~SK~~g~~GlRiG~~v~~~-~~~~~~~~~~~~~-----------------------~ 252 (359)
T PRK03158 198 AEDYPDTLPLLEKY-ENLIVLRTFSKAYGLAALRVGYGIASE-ELIEKLNIARPPF-----------------------N 252 (359)
T ss_pred CcccccHHHHHHhc-CCEEEEEechHhhcCcchhhehhcCCH-HHHHHHHHhcCCC-----------------------C
Confidence 211 100111111 1235556789999844 5578877643 3332211111000 1
Q ss_pred CCchHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHH
Q 038818 352 FRALKLWLVLRSFG-VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRK 430 (486)
Q Consensus 352 ~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 430 (486)
...+...++...+. .+.+++..+...+..+++.+.|++. ++.+. ++..+.+.+.+... ..+
T Consensus 253 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~~~g~~i~~~~~~~----------------~~~ 314 (359)
T PRK03158 253 TTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEY-GLFYY-PSQTNFIFVDTGRD----------------ANE 314 (359)
T ss_pred CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeC-CCcCcEEEEECCCC----------------HHH
Confidence 13344444444442 2345555566677778888888887 67764 44444444443211 235
Q ss_pred HHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 431 LLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 431 l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
+.+.+.++|+.+.++..+...+++|++++ +.+++++++++|+++
T Consensus 315 ~~~~l~~~gv~v~~g~~f~~~~~iRi~~~----~~~~~~~l~~al~~~ 358 (359)
T PRK03158 315 LFEALLKKGYIVRSGAALGFPTGVRITIG----LKEQNDKIIELLKEL 358 (359)
T ss_pred HHHHHHHCCeEEeeCCCCCCCCeEEEecC----CHHHHHHHHHHHHHh
Confidence 66777777876555444434678999974 567999999999875
No 206
>PRK09148 aminotransferase; Validated
Probab=99.78 E-value=3.4e-16 Score=158.35 Aligned_cols=319 Identities=12% Similarity=0.058 Sum_probs=198.0
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCc
Q 038818 103 FNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTH 182 (486)
Q Consensus 103 ~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 182 (486)
..|....+..++.+.+.+++.+.+|.+... ....++|+|+++++..++.+... +++.|+++..++
T Consensus 62 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~----~~~I~it~G~~~al~~~~~~l~~-----------~gd~Vl~~~P~y 126 (405)
T PRK09148 62 HRYSASKGIPGLRRAQAAYYARRFGVKLNP----DTQVVATLGSKEGFANMAQAITA-----------PGDVILCPNPSY 126 (405)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEcCChHHHHHHHHHHhcC-----------CCCEEEEcCCCC
Confidence 456555556789899999998887864221 01589999999998776665543 567788888999
Q ss_pred hHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCc---hHHHHHHHHh
Q 038818 183 SALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPL---GPLCDIAKRY 259 (486)
Q Consensus 183 ~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl---~~I~~i~~~~ 259 (486)
..+...+...|+ +++.+|++.++. ++++++++++... ..+.+|+.+.++||||.+-+. ++|.++|++|
T Consensus 127 ~~~~~~~~~~g~---~v~~v~~~~~~~---~~~~l~~~~~~~~---~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~ 197 (405)
T PRK09148 127 PIHAFGFIMAGG---VIRSVPAEPDEE---FFPALERAVRHSI---PKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKH 197 (405)
T ss_pred cccHHHHHhcCC---EEEEEeCCCCCC---CccCHHHHHhhcc---ccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHc
Confidence 888888899999 999999875433 3445555554321 124678889999999999775 6888899999
Q ss_pred CceEEeeccccchhccCccchhh--hcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCCCC
Q 038818 260 SIWVHVDAAYAGSACICPEFRHF--IDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASDSK 336 (486)
Q Consensus 260 g~~lhvD~a~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 336 (486)
|+++++|++|+.+.......... +.+......+..++.|.++.| .-+|+++. ++.... .+.....+...
T Consensus 198 ~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~-~~~~i~-~l~~~~~~~~~------ 269 (405)
T PRK09148 198 DIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVG-NERLIA-ALTRVKSYLDY------ 269 (405)
T ss_pred CeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeC-CHHHHH-HHHHHHHHhcc------
Confidence 99999999997644211111111 111111223467889999844 45788765 333332 22111111100
Q ss_pred CccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEE-EeecCCC
Q 038818 337 QVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCF-RVLPSAS 413 (486)
Q Consensus 337 ~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f-~~~~~~~ 413 (486)
....+...++...+ +.+.+++..+...+..+++.+.|+++ ++.+. +|..+.+.| ++.+..
T Consensus 270 --------------~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~-~p~~g~f~~~~l~~~~- 332 (405)
T PRK09148 270 --------------GAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRA-GWDIP-PPAASMFAWAPIPEAF- 332 (405)
T ss_pred --------------CCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCccC-CCCeeEEEEEECCCcc-
Confidence 01122222333333 23456667777888888999999886 66644 444444443 443210
Q ss_pred CCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 414 GLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 414 ~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
...+ ..++.+.+. +.|+.+..+..+. +..++|+++. .+.+.+++.++.|.++++++-
T Consensus 333 --------~~~~--~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~---~~~~~l~~al~~l~~~l~~~~ 392 (405)
T PRK09148 333 --------RHLG--SLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV---ENEQRIRQAARNIKRFLSSAD 392 (405)
T ss_pred --------CCCC--HHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec---CCHHHHHHHHHHHHHHHHHHH
Confidence 0001 134555554 5687555444332 2578999984 356788888888888776543
No 207
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.78 E-value=1e-16 Score=161.03 Aligned_cols=234 Identities=13% Similarity=0.151 Sum_probs=165.2
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH--
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA-- 184 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-- 184 (486)
..|...++| +.++++.|.+ ..+++++|+.|+..++.+... +++.|+++...|..
T Consensus 68 ~~p~~~~le----~~lA~l~g~~---------~al~~~sG~~Ai~~~l~all~-----------~Gd~Vl~~~~~~~~t~ 123 (403)
T PRK07810 68 GNPTVSMFE----ERLRLIEGAE---------ACFATASGMSAVFTALGALLG-----------AGDRLVAARSLFGSCF 123 (403)
T ss_pred CCchHHHHH----HHHHHHhCCC---------cEEEECChHHHHHHHHHHHhC-----------CCCEEEEccCCcchHH
Confidence 445545555 4578888865 368899999888776655432 56678878765532
Q ss_pred --HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCce
Q 038818 185 --LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIW 262 (486)
Q Consensus 185 --~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~ 262 (486)
+.+.++..|+ +++.++. .|+++++++|++++ .+|+++.++|++|.+-|+++|+++|+++|++
T Consensus 124 ~~~~~~~~~~G~---~v~~vd~-------~d~~~l~~ai~~~t------klV~~esp~Nptg~v~dl~~I~~la~~~g~~ 187 (403)
T PRK07810 124 VVCNEILPRWGV---ETVFVDG-------EDLSQWEEALSVPT------QAVFFETPSNPMQSLVDIAAVSELAHAAGAK 187 (403)
T ss_pred HHHHHHHHHcCc---EEEEECC-------CCHHHHHHhcCcCc------eEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence 3456677788 8888863 28999999987654 3788999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccC
Q 038818 263 VHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVD 340 (486)
Q Consensus 263 lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 340 (486)
++||++|+.+....+ .. .++|.++.++||+++++.. .|+++.+++. +.+.+. .+...
T Consensus 188 vivD~a~a~~~~~~~-~~------~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~-~~~~l~---~~~~~---------- 246 (403)
T PRK07810 188 VVLDNVFATPLLQRG-LP------LGADVVVYSGTKHIDGQGRVLGGAILGDREY-IDGPVQ---KLMRH---------- 246 (403)
T ss_pred EEEECCCCccccCCh-hh------cCCcEEEccCCceecCCcCceeEEEEeChHH-HHHHHH---HHHHH----------
Confidence 999999976544222 11 1689999999999987543 4666655542 221111 11110
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEec-C-----C-----------CeeE
Q 038818 341 YKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVA-P-----R-----------NFAV 403 (486)
Q Consensus 341 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~-----~-----------~~~~ 403 (486)
.+.......+|+.++ +.+.+..++++..+++.++.+.|+++|.++-+. | | ..++
T Consensus 247 -------~g~~~s~~~a~l~l~--~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~ 317 (403)
T PRK07810 247 -------TGPALSAFNAWVLLK--GLETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTV 317 (403)
T ss_pred -------hCCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceE
Confidence 111234566676665 557889999999999999999999999876443 2 1 2458
Q ss_pred EEEEeec
Q 038818 404 VCFRVLP 410 (486)
Q Consensus 404 v~f~~~~ 410 (486)
++|.+..
T Consensus 318 ~s~~l~~ 324 (403)
T PRK07810 318 VTFELDA 324 (403)
T ss_pred EEEEEcC
Confidence 8888864
No 208
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=1.2e-16 Score=161.77 Aligned_cols=237 Identities=16% Similarity=0.134 Sum_probs=157.7
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH-
Q 038818 108 SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ- 186 (486)
Q Consensus 108 ~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~- 186 (486)
+|....+| +.++++.|.+ .++++++|+.|+..++.+... +++.|+++...|.+..
T Consensus 62 ~p~~~~le----~~lA~l~g~~---------~al~~~SG~~Ai~~al~all~-----------pGd~VIv~~~~y~~t~~ 117 (427)
T PRK05994 62 NPTNAVLE----ERVAALEGGT---------AALAVASGHAAQFLVFHTLLQ-----------PGDEFIAARKLYGGSIN 117 (427)
T ss_pred CccHHHHH----HHHHHHhCCC---------cEEEEcCHHHHHHHHHHHHhC-----------CCCEEEEecCcchhHHH
Confidence 34444444 5578888765 358889999999877766533 5677888888887533
Q ss_pred ---HHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceE
Q 038818 187 ---KAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWV 263 (486)
Q Consensus 187 ---~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~l 263 (486)
..+...|+ +++.++++ |++++++++++.+ .+|+++.++|++|.+.|+++|+++|+++|+++
T Consensus 118 ~~~~~~~~~G~---~v~~vd~~-------d~~~l~~ai~~~t------klV~vesp~NptG~v~dl~~I~~la~~~gi~l 181 (427)
T PRK05994 118 QFGHAFKSFGW---QVRWADAD-------DPASFERAITPRT------KAIFIESIANPGGTVTDIAAIAEVAHRAGLPL 181 (427)
T ss_pred HHHHHHHhcCc---EEEEECCC-------CHHHHHHhcCcCC------eEEEEECCCCCCCeecCHHHHHHHHHHcCCEE
Confidence 34666788 88887642 7899999887543 47888999999999999999999999999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCc-ceEEEeeCch-HHHHHhcCCcccccCccCCCCCccCC
Q 038818 264 HVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD-CCCLWVKNPN-ALIKALSTNPEFLRNKASDSKQVVDY 341 (486)
Q Consensus 264 hvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~~~~~-~~~~~~~~~~~y~~~~~~~~~~~~~~ 341 (486)
++|++++.+....+ .. .++|.++.++||+++++.+ .|.+++.... .+.. ....+++.......++..-.
T Consensus 182 ivD~a~a~~~~~~p-l~------~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~--~k~~~~~~~~~~~~~~~~~~ 252 (427)
T PRK05994 182 IVDNTLASPYLIRP-IE------HGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSK--SGKYPMLSEPRPEYHGLVLH 252 (427)
T ss_pred EEECCccccccCCc-cc------cCCcEEEEcCccccCCCCCcEEEEEEeCCcccccc--ccccccccCCcchhhhhhHH
Confidence 99999976543222 11 2899999999999997754 4555553221 1100 00001111100000000000
Q ss_pred ---C----------CccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Q 038818 342 ---K----------DWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEI 395 (486)
Q Consensus 342 ---~----------~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 395 (486)
. ......|.....+.+|..++ |.+.+..++++..+++.++.+.|+++|.++-
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~--~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~ 317 (427)
T PRK05994 253 ETFGNFAFAIAARVLGLRDLGPAISPFNAFLILT--GIETLPLRMQRHSDNALAVAEWLKGHPKVSW 317 (427)
T ss_pred HHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHc--CcccHHHHHHHHHHHHHHHHHHHHhCCCccE
Confidence 0 00011233345566676665 5688899999999999999999999998753
No 209
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.77 E-value=6e-17 Score=161.27 Aligned_cols=226 Identities=16% Similarity=0.189 Sum_probs=157.6
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH----HHHHHHHc
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA----LQKAAQIA 192 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~a~~~~ 192 (486)
++.+.++++.|.+. .++++||+.|+..++ .... +++.|+++...+.+ +...+...
T Consensus 56 ~le~~la~l~g~~~---------~~~~~sG~~ai~~~~-~ll~-----------~Gd~Vl~~~~~y~~t~~~~~~~~~~~ 114 (366)
T PRK08247 56 VLEQAIADLEGGDQ---------GFACSSGMAAIQLVM-SLFR-----------SGDELIVSSDLYGGTYRLFEEHWKKW 114 (366)
T ss_pred HHHHHHHHHhCCCc---------EEEEcCHHHHHHHHH-HHhC-----------CCCEEEEecCCcCcHHHHHHHHhhcc
Confidence 34456888888753 478888888775443 2221 45667777777665 34455667
Q ss_pred CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccch
Q 038818 193 GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGS 272 (486)
Q Consensus 193 G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~ 272 (486)
|+ +++.++. .|+++|++++++++ .+|+++.++|++|.+.++++|+++|+++|+++++|++|+..
T Consensus 115 G~---~v~~vd~-------~d~~~l~~~i~~~t------klv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~ 178 (366)
T PRK08247 115 NV---RFVYVNT-------ASLKAIEQAITPNT------KAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTP 178 (366)
T ss_pred Cc---eEEEECC-------CCHHHHHHhcccCc------eEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccc
Confidence 88 8888764 38899999887643 47888999999999999999999999999999999999665
Q ss_pred hccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCC
Q 038818 273 ACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSR 350 (486)
Q Consensus 273 ~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr 350 (486)
....+ .. .++|.++.+++|+++++.+ .|++..+++......... ..+. +.
T Consensus 179 ~~~~p-~~------~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~-~~~~--------------------g~ 230 (366)
T PRK08247 179 VLQRP-LE------EGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYY-QNAA--------------------GA 230 (366)
T ss_pred cccCc-hh------cCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHH-HHhc--------------------CC
Confidence 43322 11 2689999999999997644 566665544443222110 0000 01
Q ss_pred CCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEec-CCCeeEEEEEee
Q 038818 351 RFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVA-PRNFAVVCFRVL 409 (486)
Q Consensus 351 ~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~~~~~v~f~~~ 409 (486)
....+..|+.++ +.+.+..++++..++++.+.+.|+++|++..+. |+..++++|.+.
T Consensus 231 ~~s~~~a~l~~~--~l~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~~ 288 (366)
T PRK08247 231 VLSPFDSWLLIR--GMKTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRLQ 288 (366)
T ss_pred CCChHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEEEEC
Confidence 123344566665 445677788888999999999999999987544 447889999764
No 210
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.77 E-value=1.5e-16 Score=149.28 Aligned_cols=298 Identities=14% Similarity=0.139 Sum_probs=205.2
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH
Q 038818 111 ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ 190 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 190 (486)
...||+ .|++|.+-+.. ++.+++--||-..|...-.. +|+.+||..+-.|.|+...++
T Consensus 218 hv~LE~----eLA~LHqK~aA---------LlFsSCfVANDstLftLak~---------lpgcei~SD~gNHASMI~GIr 275 (570)
T KOG1360|consen 218 HVRLEA----ELADLHQKEAA---------LLFSSCFVANDSTLFTLAKK---------LPGCEIFSDEGNHASMIQGIR 275 (570)
T ss_pred hhhHHH----HHHHHhcCcce---------eeeeeeeeccchHHHHHHHH---------CCCcEEeccccchHHHHHHhh
Confidence 445555 47888766543 44455455554444333222 288899988889999999999
Q ss_pred HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeecccc
Q 038818 191 IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYA 270 (486)
Q Consensus 191 ~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g 270 (486)
..++ .-+.+. +.|+++|+++|+.... .+|.+|......++.|++.||+||++++++||+...+|+.|+
T Consensus 276 ns~v---~K~IFr-------HND~~hL~~lL~~~~~--svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHA 343 (570)
T KOG1360|consen 276 NSRV---PKHIFR-------HNDLDHLEQLLQSSPK--SVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHA 343 (570)
T ss_pred hcCC---cceeec-------cCCHHHHHHHHHhCCC--CCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhh
Confidence 9888 444444 4499999999987533 468899999999999999999999999999999999999987
Q ss_pred chhccCccchhh--hcC-CCCCCceeeccccccCCCCcceEEEeeCchHHHHHh-cCCcccccCccCCCCCccCCCCccc
Q 038818 271 GSACICPEFRHF--IDG-IEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKAL-STNPEFLRNKASDSKQVVDYKDWQI 346 (486)
Q Consensus 271 ~~~~~~~~~~~~--~~~-~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~-~~~~~y~~~~~~~~~~~~~~~~~~~ 346 (486)
.+.+.. ..... -+| +.++|.|+....|.++.- |..+.....+ .+.+ +..++|++....
T Consensus 344 VGlYG~-rGaGvgerdGvm~kvDiIsGTLgKafGcV---GGYIAat~~L-vDmiRSyAaGFIFTTSL------------- 405 (570)
T KOG1360|consen 344 VGLYGP-RGAGVGERDGVMHKVDIISGTLGKAFGCV---GGYIAATRKL-VDMIRSYAAGFIFTTSL------------- 405 (570)
T ss_pred hccccC-CCCCccccCCcchhhhhcccchhhhcccc---cceehhhhhH-HHHHHHhcCceEEecCC-------------
Confidence 665422 11110 123 468999999999998753 3333333333 3333 456777765321
Q ss_pred cCCCCCCc-hHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccch
Q 038818 347 TLSRRFRA-LKLWLVLRSF-GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGA 424 (486)
Q Consensus 347 ~~sr~~~~-l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~ 424 (486)
+... ..+..+.+.+ +.+| +...+...++..|+++.|.++ |+.++..| +.+|..++.+
T Consensus 406 ----PP~vl~GAleaVr~lk~~eg-~~lR~~hqrnv~~~kq~l~~~-GiPVi~~p-SHIiPv~vgd-------------- 464 (570)
T KOG1360|consen 406 ----PPMVLAGALEAVRILKSEEG-RVLRRQHQRNVKYVKQLLMEL-GIPVIPNP-SHIIPVRVGD-------------- 464 (570)
T ss_pred ----ChHHHHhHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHHc-CCcccCCC-cceeeeeccC--------------
Confidence 1111 1223334433 3455 345566678889999999987 88887544 5888888765
Q ss_pred HHHHHHHHHHHHhcCcEEE----eeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 425 NELNRKLLESINASGQLYV----SHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 425 ~~~~~~l~~~l~~~g~~~~----~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
..+++++.+.|+.+..+++ .|++..|...||+..+ |+.|++.++.+++++..+.+++
T Consensus 465 a~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPT-P~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 465 AALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPT-PHHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred HHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCC-CCCCHHHHHHHHHHHHHHHHHc
Confidence 3567778887765544444 3556678889999985 7778989999999999887654
No 211
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.77 E-value=2e-16 Score=160.87 Aligned_cols=316 Identities=12% Similarity=0.061 Sum_probs=190.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH
Q 038818 111 ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ 190 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 190 (486)
....+.++.+.+++++|.+.+ ..++++|||+||..|+.+++... .++.+++.....|.+...+..
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~~-------~v~~~~sgsea~~~al~~~~~~~--------~~~~ii~~~~~yhg~~~~~~~ 141 (413)
T cd00610 77 YNEPAVELAELLLALTPEGLD-------KVFFVNSGTEAVEAALKLARAYT--------GRKKIISFEGAYHGRTLGALS 141 (413)
T ss_pred CCHHHHHHHHHHHHhCCCCCC-------EEEEcCcHHHHHHHHHHHHHHHc--------CCCeEEEECCCcCCccHHHHH
Confidence 456777888899999985433 68999999999999999887531 034445555566766555554
Q ss_pred HcCCC---------CCCeEEEecCCC----CCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHH
Q 038818 191 IAGID---------PKNFRAIKTTKS----SSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLC 253 (486)
Q Consensus 191 ~~G~g---------~~~v~~v~~d~~----~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~ 253 (486)
..+-. ...++.+|.++. .++..|+++|++.+++. +..+.+|+++...+++|.+.| +++|.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~ 218 (413)
T cd00610 142 LTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEH---PEEVAAVIVEPIQGEGGVIVPPPGYLKALR 218 (413)
T ss_pred hcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcC---CCCEEEEEEccccCCCCCccCCHHHHHHHH
Confidence 43321 124677776521 12355899999988652 123557777778888898877 99999
Q ss_pred HHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccC
Q 038818 254 DIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKAS 333 (486)
Q Consensus 254 ~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~ 333 (486)
++|++||+++++|++|+++............++ ..|.+++ .|+++.++++|+++.++ +... .+. ...+...
T Consensus 219 ~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~-~~d~~t~--sK~l~~g~~~g~~~~~~-~~~~-~~~-~~~~~~~--- 289 (413)
T cd00610 219 ELCRKHGILLIADEVQTGFGRTGKMFAFEHFGV-EPDIVTL--GKGLGGGLPLGAVLGRE-EIMD-AFP-AGPGLHG--- 289 (413)
T ss_pred HHHHHcCCEEEEeccccCCCcCcchhhHhhcCC-CCCeEEE--cccccCccccEEEEEcH-HHHH-hhc-cCCCCCC---
Confidence 999999999999999976421111101011122 3466655 49999888899887753 3332 220 0000000
Q ss_pred CCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCC---eEEecCCCeeEEEEEeec
Q 038818 334 DSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNR---FEIVAPRNFAVVCFRVLP 410 (486)
Q Consensus 334 ~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~---~~~~~~~~~~~v~f~~~~ 410 (486)
. +. ++-.....++..+++.+.. .++.++..++.+++++.|+++.. +.........++++.+..
T Consensus 290 --------~--t~-~~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 355 (413)
T cd00610 290 --------G--TF-GGNPLACAAALAVLEVLEE---EGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVK 355 (413)
T ss_pred --------C--CC-CcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEec
Confidence 0 00 1111122334444554432 34567777888888888765421 111112345677777754
Q ss_pred CCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 411 SASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
.... ..........+.+.+.++|+.+ .+.. ...+|++++ ...+++||+++++.|+++
T Consensus 356 ~~~~------~~~~~~~~~~~~~~l~~~gv~v-~~~~---~~~lR~~~~-~~~t~~~i~~~~~~l~~~ 412 (413)
T cd00610 356 DRAT------KPPDKELAAKIIKAALERGLLL-RPSG---GNVIRLLPP-LIITEEEIDEGLDALDEA 412 (413)
T ss_pred CCCc------CCcchHHHHHHHHHHHHCCeEE-eecC---CCEEEEECC-CcCCHHHHHHHHHHHHHh
Confidence 2100 0000133456788888888753 3321 457999984 566788999999999875
No 212
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=1.4e-16 Score=160.77 Aligned_cols=302 Identities=14% Similarity=0.147 Sum_probs=183.0
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH----Hc
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ----IA 192 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~----~~ 192 (486)
++.+.++++.|.+ ..+++++|++|+..++.+... +++.|+++...|......+. ..
T Consensus 62 ~Le~~lA~l~g~~---------~~l~~ssG~~Ai~~al~al~~-----------~Gd~Vl~~~~~Y~~t~~~~~~~l~~~ 121 (425)
T PRK06084 62 VLEQRVAALEGGV---------GALAVASGMAAITYAIQTIAE-----------AGDNIVSVAKLYGGTYNLLAHTLPRI 121 (425)
T ss_pred HHHHHHHHHhCCC---------ceeEehhHHHHHHHHHHHHhC-----------CCCEEEEeCCCcchHHHHHHHhcccc
Confidence 3445678887753 357889999888777766543 55667777666654333332 23
Q ss_pred CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccch
Q 038818 193 GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGS 272 (486)
Q Consensus 193 G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~ 272 (486)
|+ ++..++ ..|+++|++++++++ .+|+++.++|++|.+-|+++|.++|+++|+++++|++|+.+
T Consensus 122 gi---~v~~~d-------~~d~e~le~ai~~~t------klV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~ 185 (425)
T PRK06084 122 GI---ETRFAA-------HDDIAALEALIDERT------KAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATP 185 (425)
T ss_pred ee---EEEEEC-------CCCHHHHHHHhccCC------cEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccc
Confidence 44 555554 248999999997643 37888999999999999999999999999999999999865
Q ss_pred hccCccchhhhcCCCCCCceeeccccccCCCCc-ceEEEee-CchHHHHH------h-cCCcccccCccCCCCCccCC--
Q 038818 273 ACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD-CCCLWVK-NPNALIKA------L-STNPEFLRNKASDSKQVVDY-- 341 (486)
Q Consensus 273 ~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~~-~~~~~~~~------~-~~~~~y~~~~~~~~~~~~~~-- 341 (486)
....+ .. .++|.++.++||+++++.. .|.+++. ........ + ...+.|..-......+....
T Consensus 186 ~~~~p-~~------~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 258 (425)
T PRK06084 186 VLCRP-FE------HGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIG 258 (425)
T ss_pred ccCCh-hh------cCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHH
Confidence 43222 11 2799999999999987643 3444443 22111110 0 01111110000000000000
Q ss_pred ---CCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe-cC---------------C--C
Q 038818 342 ---KDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIV-AP---------------R--N 400 (486)
Q Consensus 342 ---~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~---------------~--~ 400 (486)
.......+.......+|+.++ |.+.+..++++..+++..+.+.|+++|.++-+ .| + .
T Consensus 259 ~~~~~~~~~~g~~l~~~~a~l~lr--gl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~ 336 (425)
T PRK06084 259 RCRVVPLRNMGAALSPFNAFLILQ--GLETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKP 336 (425)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCc
Confidence 000111233345566676665 66889999999999999999999999987543 22 1 2
Q ss_pred eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHh--cCc-------EEEeee-----eE-------CC--EeEEEEE
Q 038818 401 FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINA--SGQ-------LYVSHG-----MV-------AG--IYFIRFA 457 (486)
Q Consensus 401 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~g~-------~~~~~~-----~~-------~~--~~~lR~~ 457 (486)
.++++|.+.+. .+...++.+.|.- .+. ++..+. .. .| .+.+|+|
T Consensus 337 gg~~s~~~~~~-------------~~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~s 403 (425)
T PRK06084 337 ASILSFGIKGG-------------QAAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRLS 403 (425)
T ss_pred ceEEEEEecCC-------------HHHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEEE
Confidence 45888888642 1223455554421 111 011111 00 12 4689999
Q ss_pred ecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 458 VGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 458 ~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
++- ||.|.+++.|.++++.
T Consensus 404 vGl-----Ed~~dLi~dl~~Al~~ 422 (425)
T PRK06084 404 IGI-----EHIDDIIADLAQALDA 422 (425)
T ss_pred ecc-----CCHHHHHHHHHHHHHh
Confidence 953 3778888888877654
No 213
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.77 E-value=1.7e-16 Score=159.67 Aligned_cols=220 Identities=19% Similarity=0.180 Sum_probs=153.2
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH---
Q 038818 108 SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA--- 184 (486)
Q Consensus 108 ~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--- 184 (486)
+|....+| +.++++.|.+. .+++++|+.|+..++..... +++.|+++...|..
T Consensus 64 ~p~~~~le----~~lA~l~g~~~---------~i~~~sG~~Al~~~l~~ll~-----------~Gd~Viv~~~~y~~t~~ 119 (403)
T PRK07503 64 NPTLALLE----QRMASLEGGEA---------AVALASGMGAITATLWTLLR-----------PGDEVIVDQTLYGCTFA 119 (403)
T ss_pred CchHHHHH----HHHHHHhCCCc---------EEEEcCHHHHHHHHHHHHcC-----------CCCEEEEccCccchHHH
Confidence 44444554 56888888753 47788888887766654322 56677788776644
Q ss_pred -HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceE
Q 038818 185 -LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWV 263 (486)
Q Consensus 185 -~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~l 263 (486)
....+...|+ +++.++.+ |+++|++++++.+ .+|+++.++|++|.+.|+++|+++|+++|+++
T Consensus 120 ~~~~~~~~~G~---~v~~vd~~-------d~~~l~~~i~~~t------klV~le~p~NPtG~~~di~~I~~la~~~gi~l 183 (403)
T PRK07503 120 FLHHGLGEFGV---TVRHVDLT-------DPAALKAAISDKT------RMVYFETPANPNMRLVDIAAVAEIAHGAGAKV 183 (403)
T ss_pred HHHHHHhhCCE---EEEEeCCC-------CHHHHHHhcCccC------cEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEE
Confidence 3345566788 88877653 7899999887643 37888899999999999999999999999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCC
Q 038818 264 HVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDY 341 (486)
Q Consensus 264 hvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 341 (486)
++|++|+.+....+ .. .++|.++.+++|+++++.+ +|+++ .+++...+..... ...
T Consensus 184 IvD~a~a~~~~~~~-l~------~g~Di~v~S~tK~l~g~gd~~gG~v~-~~~~l~~~l~~~~---~~~----------- 241 (403)
T PRK07503 184 VVDNTYCTPYLQRP-LE------LGADLVVHSATKYLGGHGDITAGLVV-GGKALADRIRLEG---LKD----------- 241 (403)
T ss_pred EEECCCcccccCCc-hh------hCCCEEEccccccccCCCceeEEEEE-cCHHHHHHHHhhh---HHh-----------
Confidence 99999976533211 11 2789999999999997753 56655 5554433221100 000
Q ss_pred CCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe
Q 038818 342 KDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIV 396 (486)
Q Consensus 342 ~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 396 (486)
..+-....+.+|..++ +.+.+..++++..+++..+.+.|+++|.++.+
T Consensus 242 -----~~g~~~s~~~a~l~l~--~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V 289 (403)
T PRK07503 242 -----MTGAVMSPFDAFLLMR--GLKTLALRMDRHCASAQAVAEWLARHPAVELV 289 (403)
T ss_pred -----CcCCCCCHHHHHHHHc--CcchHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 0112334556666665 45778888889999999999999999887644
No 214
>PLN02452 phosphoserine transaminase
Probab=99.77 E-value=1.2e-16 Score=157.61 Aligned_cols=340 Identities=12% Similarity=0.050 Sum_probs=213.8
Q ss_pred CcceecCCCCCH-HHHHHHHHHhhcCCCcc------ccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCch
Q 038818 75 YYFAYFPSSGSI-AGFLGEMLSSGFNVVGF------NWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTC 147 (486)
Q Consensus 75 ~~~~~~~~~~~~-~~~~~~~l~~~~n~~~~------~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt 147 (486)
+-+.|.|+|... +.++..+....+|-... ....++.+.++-+++.+.|.++++.|+++ ...++++|||
T Consensus 7 ~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y-----~v~~l~Gsgt 81 (365)
T PLN02452 7 RVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNY-----EVLFLQGGAS 81 (365)
T ss_pred ceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEeCccH
Confidence 445677877654 45555555555442211 11246778899999999999999997654 2456678888
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH--HHHHHHHcCCCCCCeEEEecCCCC-CcccCHHHHHHHHHHH
Q 038818 148 EAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA--LQKAAQIAGIDPKNFRAIKTTKSS-SFTLTPESLQAAIDLD 224 (486)
Q Consensus 148 ~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~a~~~~G~g~~~v~~v~~d~~~-~~~~d~~~L~~~l~~~ 224 (486)
.++-.++...... .+.+.++. ...++ +.+.|+.+|. ..+.......+ ....++++++. +
T Consensus 82 ~~~ea~~~nl~~~----------~~~~l~~~-~G~fg~r~~~~a~~~g~---~~~~~~~~~~~~~~~~~~~~~~~----~ 143 (365)
T PLN02452 82 TQFAAIPLNLCKP----------GDKADFVV-TGSWSKKAAKEAKKYCK---TNVIASGKDEKYTKIPSVSEWEL----T 143 (365)
T ss_pred HHHHHHHHhcCCC----------CCeEEEEE-CCHHHHHHHHHHHHhCC---CcEEEecCCCCCCCCCChHHcCC----C
Confidence 7765554443321 23334433 56766 6667777776 33333221111 11456666521 1
Q ss_pred HHCCCccEEEEeecCCccccc-cCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC
Q 038818 225 IQAGLIPLFLCATVGTTAITT-VDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT 303 (486)
Q Consensus 225 ~~~g~~p~~vv~~~gtt~~G~-idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p 303 (486)
..+.+|.++++.|.+|. +.|++++.+ +.++||++...+....+- +..+.+..++||+++ |
T Consensus 144 ----~~~~~v~~~hnETstGv~~~~~~~i~~------~~lvVDa~Ss~g~~pidv--------~~~~v~~~saqK~lG-P 204 (365)
T PLN02452 144 ----PDAKFVHICANETIHGVEFKDYPDVGN------VPLVADMSSNFLSKPVDV--------SKYGVIYAGAQKNVG-P 204 (365)
T ss_pred ----CCCcEEEECCCCCCCcEecCcccccCC------CeEEEECCccccCcccCH--------HHcCEEEEecccccC-C
Confidence 12458999999999999 599988863 899999998776654432 123334469999985 9
Q ss_pred CcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC-CCchHHHHHHHHhchH-HHHHHHHHHHHHHH
Q 038818 304 LDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR-FRALKLWLVLRSFGVA-NLRNFLRSHVRMAQ 381 (486)
Q Consensus 304 ~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~-g~~~~~~~~~~~a~ 381 (486)
.|.|++++|++.+- +.-...+.|+..... ....+...+-. +...++..+++.+-.+ |++.+.++..++++
T Consensus 205 ~Gl~~v~vr~~~l~-~~~~~~~~~~~~~~~-------~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~ 276 (365)
T PLN02452 205 SGVTIVIIRKDLIG-NARPITPGMLDYKIH-------AENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKAD 276 (365)
T ss_pred CCeEEEEEcHHHHh-hcccCCCchhhHHHH-------HhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 99999999877542 222222333211100 00000001111 1234555667766555 89999999999999
Q ss_pred HHHHHHhCCCCeEEe-cCC---CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEE
Q 038818 382 LFQELVGGDNRFEIV-APR---NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFA 457 (486)
Q Consensus 382 ~l~~~L~~~~~~~~~-~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~ 457 (486)
++++.|++.++|... .++ ...+++|++... +..+++.+.+.++|.+.+.+...-| .+|++
T Consensus 277 ~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~--------------~~~~~f~~~~~~~g~~~~~G~r~~g--g~R~s 340 (365)
T PLN02452 277 LLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGS--------------ELEAEFVKEAAKAGMVQLKGHRSVG--GMRAS 340 (365)
T ss_pred HHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCc--------------hhHHHHHHHHHHCCCcccCCccccC--ceEEE
Confidence 999999998777221 111 234788887642 2567888889899986655543333 39999
Q ss_pred ecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 458 VGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 458 ~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
+.| ..+.++|++|++.+++..++
T Consensus 341 ~yn-a~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 341 IYN-AMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred CcC-CCCHHHHHHHHHHHHHHHHh
Confidence 975 67778999999999987654
No 215
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.77 E-value=1.5e-16 Score=159.12 Aligned_cols=227 Identities=16% Similarity=0.203 Sum_probs=157.4
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH----HHHHHHH
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA----LQKAAQI 191 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~a~~~ 191 (486)
.++.+.+++++|.+ .++++++|++|+..++.+... +++.|+++...|.+ +...+..
T Consensus 57 ~~le~~la~l~g~~---------~~~~~~sG~~Ai~~al~al~~-----------~Gd~Vl~~~~~~~~t~~~~~~~~~~ 116 (380)
T TIGR01325 57 AAFEERIAALEGAE---------RAVATATGMSAIQAALMTLLQ-----------AGDHVVASRSLFGSTVGFISEILPR 116 (380)
T ss_pred HHHHHHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEecCCcchHHHHHHHHHHH
Confidence 33445678888874 358899999999887765432 45567777666644 3445677
Q ss_pred cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccc
Q 038818 192 AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAG 271 (486)
Q Consensus 192 ~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~ 271 (486)
.|+ +++.++.+ |++++++++++. +.+|+++.++|++|.+.|+++|+++|+++|++++||++|+.
T Consensus 117 ~g~---~v~~v~~~-------d~~~l~~~i~~~------tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~ 180 (380)
T TIGR01325 117 FGI---EVSFVDPT-------DLNAWEAAVKPN------TKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFAT 180 (380)
T ss_pred hCC---EEEEECCC-------CHHHHHHhcCCC------ceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcc
Confidence 788 88888753 788898887653 34788899999999999999999999999999999999975
Q ss_pred hhccCccchhhhcCCCCCCceeeccccccCCCC-cc-eEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCC
Q 038818 272 SACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DC-CCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLS 349 (486)
Q Consensus 272 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~-g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~s 349 (486)
+....+ .. .++|.++.+++|+++++. .. |+++. +++....... +.. ..+
T Consensus 181 ~~~~~p-l~------~g~Divv~S~sK~l~g~g~~~gG~vv~-~~~~~~~l~~----~~~-----------------~~g 231 (380)
T TIGR01325 181 PVLQQP-LK------LGADVVVYSATKHIDGQGRVMGGVIAG-SEELMAEVAV----YLR-----------------HTG 231 (380)
T ss_pred cccCCc-hh------hCCCEEEeeccceecCCCCeEEEEEEe-CHHHHHHHHH----HHH-----------------hhC
Confidence 433221 11 168999999999999764 33 54444 4433322111 110 011
Q ss_pred CCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEec-C-----C-----------CeeEEEEEee
Q 038818 350 RRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVA-P-----R-----------NFAVVCFRVL 409 (486)
Q Consensus 350 r~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~-----~-----------~~~~v~f~~~ 409 (486)
.......+|..++ +.+.+..++++..+++.++.+.|+++|.++-+. | | ..++++|.+.
T Consensus 232 ~~~~p~~a~~~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~ 306 (380)
T TIGR01325 232 PAMSPFNAWVLLK--GLETLSLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA 306 (380)
T ss_pred CCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC
Confidence 1223344565554 567778889999999999999999998876432 2 1 2468888886
No 216
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.77 E-value=5.5e-16 Score=156.81 Aligned_cols=291 Identities=18% Similarity=0.130 Sum_probs=182.1
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCC
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGID 195 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g 195 (486)
.++.+++++++|.+.. ...++++||++|+..|+..++.. | ++.+|......|.+...+....|..
T Consensus 88 ~~la~~l~~~~~~~~~------~~v~~~~sgsea~~~al~~~~~~--------g-~~~ii~~~~~yhg~~~~~~~~~~~~ 152 (398)
T PRK03244 88 IALAERLVELLGAPEG------GRVFFCNSGAEANEAAFKLARLT--------G-RTKIVAAEGGFHGRTMGALALTGQP 152 (398)
T ss_pred HHHHHHHHHhCCCCCC------CEEEEeCchHHHHHHHHHHHHHH--------C-CCeEEEECCCcCCccHHHHhccCCc
Confidence 4667888888885421 26899999999999999988763 1 2345555555565555554444421
Q ss_pred C---------CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHHHHHHhCce
Q 038818 196 P---------KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCDIAKRYSIW 262 (486)
Q Consensus 196 ~---------~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~i~~~~g~~ 262 (486)
. .++..+|. .|+++|++++.+ .+.+|+++...+++|.+-| +++|.++|++||++
T Consensus 153 ~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~------~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~l 219 (398)
T PRK03244 153 AKRAPFEPLPGGVEHVPY-------GDVDALAAAVDD------DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGAL 219 (398)
T ss_pred ccccCCCCCCCCceEeCC-------CCHHHHHHhhcC------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 0 02333332 378999988742 2457778888999999977 89999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCC
Q 038818 263 VHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYK 342 (486)
Q Consensus 263 lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 342 (486)
+++|++|.++......+.....++ ..|.+++ .|+++..++.|.++.+++ . .+.+.. ....
T Consensus 220 lI~DEv~~g~gr~g~~~~~~~~~~-~pDi~t~--sK~l~~G~~ig~~~~~~~-~-~~~~~~---~~~~------------ 279 (398)
T PRK03244 220 LVLDEVQTGIGRTGAWFAHQHDGV-TPDVVTL--AKGLGGGLPIGACLAFGP-A-ADLLTP---GLHG------------ 279 (398)
T ss_pred EEEeccccCCcccchHHhhhhhCC-CCCEEEE--chhhhCCcccEEEEEcHH-H-HhhccC---CCCc------------
Confidence 999999976422111011011222 4676655 699997788999988765 2 222211 0000
Q ss_pred CccccCCCCCCchHHHH---HHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEec--CCCeeEEEEEeecCCCCCCC
Q 038818 343 DWQITLSRRFRALKLWL---VLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVA--PRNFAVVCFRVLPSASGLGD 417 (486)
Q Consensus 343 ~~~~~~sr~~~~l~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~--~~~~~~v~f~~~~~~~~~~~ 417 (486)
.+. ....+.+.+ ++..+..+ +..++..++.++|++.|+++ ++.++. .....++.+.+...
T Consensus 280 -~t~----~~~~~~~aaa~a~l~~~~~~---~~~~~~~~~~~~l~~~L~~~-~~~~~~~v~g~g~~~~i~~~~~------ 344 (398)
T PRK03244 280 -STF----GGNPVACAAALAVLDTIASE---GLLENAERLGEQLRAGIEAL-GHPLVDHVRGRGLLLGIVLTAP------ 344 (398)
T ss_pred -CCC----CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhc-CCCceeeEeeccEEEEEEEecc------
Confidence 011 112233333 33333322 45677778889999999875 222111 12345556665321
Q ss_pred CCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 418 GKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 418 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
...++.+++.++|+++ .+. +..++|+++. ...+++||+++++.|+++++++.
T Consensus 345 ---------~~~~~~~~l~~~Gv~~-~~~---~~~~iR~~p~-~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 345 ---------VAKAVEAAAREAGFLV-NAV---APDVIRLAPP-LIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred ---------HHHHHHHHHHHCCeEE-eec---CCCEEEEECC-CcCCHHHHHHHHHHHHHHHHhcc
Confidence 2456778888889753 332 3467999983 45678899999999999987653
No 217
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.77 E-value=2.6e-17 Score=162.19 Aligned_cols=337 Identities=14% Similarity=0.049 Sum_probs=209.6
Q ss_pred HHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHc
Q 038818 86 IAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEI 165 (486)
Q Consensus 86 ~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~ 165 (486)
+|.+..+.+...+ ......+|.+.++-+++.+.|.++++.+.++ ...++++|||.++-.++......
T Consensus 15 ~~~~~~~~~~~~~---~~~~HRs~~F~~i~~e~~~~L~~l~~~~~~~-----~v~~l~GsGT~a~Eaa~~nl~~~----- 81 (374)
T TIGR01365 15 RPGWSIEELKNAP---LGRSHRSKLGKEKLAEAIKKTREMLGVPADY-----LIGIVPASDTGAVEMALWSMLGC----- 81 (374)
T ss_pred CchhhHHHHhhhh---cccCcCCHHHHHHHHHHHHHHHHHhCCCCCc-----EEEEECCchHHHHHHHHHHcCCC-----
Confidence 4555555554332 2222457889999999999999999986542 13567999998776665554321
Q ss_pred cccCCCCeEEEecCCCchH--HH-HHHHHcCCCCCC-eEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCc
Q 038818 166 GRENISRLVVYGSDQTHSA--LQ-KAAQIAGIDPKN-FRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTT 241 (486)
Q Consensus 166 ~~~~~~~~~v~~s~~~H~s--~~-~a~~~~G~g~~~-v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt 241 (486)
++..+++. ..++ +. +.|+.+|+ . +..+..+... .+|+++++. + + .|+++++.|
T Consensus 82 -----~g~~vLv~--g~FG~r~~~eia~~~g~---~~v~~l~~~~g~--~~~~~~ve~--~----~-----~v~~vhnET 138 (374)
T TIGR01365 82 -----RGVDVLAW--ESFGKGWVTDVTKQLKL---PDVRVLEAEYGK--LPDLKKVDF--K----N-----DVVFTWNGT 138 (374)
T ss_pred -----CCCeEEEE--CHHHHHHHHHHHHhcCC---CCcEEEcCCCCC--CCCHHHcCC--C----C-----CEEEecCCC
Confidence 34334444 2444 34 78888998 4 6666665433 789999973 1 1 267999999
Q ss_pred cccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHh
Q 038818 242 AITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKAL 321 (486)
Q Consensus 242 ~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~ 321 (486)
.||...|+++|+..+ ++..++||+.-+.+....+ ++++|.+..+++|++++|+|.|+++++++.+.+ .-
T Consensus 139 STGv~npv~~i~~~~--~~~lliVDavSs~g~~~l~--------~d~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~-~~ 207 (374)
T TIGR01365 139 TSGVRVPNGDFIPAD--REGLTICDATSAAFAQDLD--------YHKLDVVTFSWQKVLGGEGAHGMLILSPRAVAR-LE 207 (374)
T ss_pred chheecccccccccc--CCCcEEEEccchhcCCCCC--------hhHCcEEEEechhccCCCCceEEEEECHHHHHH-Hh
Confidence 999999998766433 5899999998765544332 125999999999999999999999999886632 21
Q ss_pred cCCc-----ccccCccCCCCCccCCCCccccCCCCC--CchHHHHHHHH---hchH-HHHHHHHHHHHHHHHHHHHHhCC
Q 038818 322 STNP-----EFLRNKASDSKQVVDYKDWQITLSRRF--RALKLWLVLRS---FGVA-NLRNFLRSHVRMAQLFQELVGGD 390 (486)
Q Consensus 322 ~~~~-----~y~~~~~~~~~~~~~~~~~~~~~sr~~--~~l~~~~~l~~---~g~~-g~~~~~~~~~~~a~~l~~~L~~~ 390 (486)
...+ .|+..... . .+.........++ ....+++.+.. +-.+ |++++.+++.++++.+++.++++
T Consensus 208 ~~~~y~~~~~~~~~~~~---~--~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~l 282 (374)
T TIGR01365 208 SYTPAWPLPKIFRLTKG---G--KLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKN 282 (374)
T ss_pred hcCCCCCChhhhccccc---c--chhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHC
Confidence 1111 12111000 0 0000000000111 12344444333 3344 89999999999999999999998
Q ss_pred CCeEEecC-C--Cee-EEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEee-eeECCEeEEEEEecCCCCcH
Q 038818 391 NRFEIVAP-R--NFA-VVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSH-GMVAGIYFIRFAVGATLTED 465 (486)
Q Consensus 391 ~~~~~~~~-~--~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~~~~~~~~lR~~~~~~~tt~ 465 (486)
+.++++.. + .++ ++++.+.++.....+ +.....+..++.+.+.++|+.+-.+ .... ...+|+..+. ..+.
T Consensus 283 g~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~-~~~fRIg~~G-~i~~ 357 (374)
T TIGR01365 283 NWIHFLAETPEIRSNTSVCLKVVDPAIDALD---EDAQADFAKELISTLEKEGVAYDIGSYRDA-PSGLRIWCGA-TVEK 357 (374)
T ss_pred CCcccCCCChhhcCCCeEEEEeCCccccccc---cchhhHHHHHHHHHHHHCCEEEeccccccC-CCceEEecCC-cCCH
Confidence 43777653 1 233 455666332100000 0001223456787887888743222 2223 3679999985 6778
Q ss_pred HHHHHHHHHHHHHH
Q 038818 466 RHVIAAWKVVQEKL 479 (486)
Q Consensus 466 ~did~~i~~l~~~~ 479 (486)
+||+.+++.|+=+-
T Consensus 358 ~di~~l~~~l~~~~ 371 (374)
T TIGR01365 358 SDLECLCPWLDWAF 371 (374)
T ss_pred HHHHHHHHHHHHHH
Confidence 89999999987543
No 218
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.77 E-value=1.4e-16 Score=158.70 Aligned_cols=313 Identities=12% Similarity=0.106 Sum_probs=185.4
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH
Q 038818 108 SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK 187 (486)
Q Consensus 108 ~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 187 (486)
++...++| +++++.+|.+ ..++|+|||+|+..++.+..-. +++.|+++..+|.+...
T Consensus 30 g~~~~~~e----~~la~~~g~~---------~~v~~~sgt~aL~~~l~al~~~----------pGd~Viv~~~t~~~~~~ 86 (376)
T TIGR02379 30 GPFSRRCE----TWLENRTGTK---------KALLTPSCTAALEMAALLLDIQ----------PGDEVIMPSYTFVSTAN 86 (376)
T ss_pred cHHHHHHH----HHHHHHhCCC---------eEEEeCCHHHHHHHHHHHcCCC----------CcCEEEECCCCcHHHHH
Confidence 44444444 5677777763 5789999999987666543111 67789999999999999
Q ss_pred HHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeec
Q 038818 188 AAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDA 267 (486)
Q Consensus 188 a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~ 267 (486)
++...|+ +++.++++++ ++.+|+++|++++++.+ .+|+. ++++|...|+++|.++|++||+++++|+
T Consensus 87 ~~~~~G~---~~v~vd~d~~-~~~~d~~~le~~i~~~t------k~Iip---~~~~G~~~d~~~I~~la~~~~i~vIeDa 153 (376)
T TIGR02379 87 AFVLRGA---KIVFVDIRPD-TMNIDETLIESAITHRT------KAIVP---VHYAGVACDMDTIMALANKHQLFVIEDA 153 (376)
T ss_pred HHHHcCC---EEEEEecCCC-cCCCCHHHHHHhcCcCc------eEEEE---eCCCCCccCHHHHHHHHHHCCCEEEEEC
Confidence 9999999 9999999863 47899999999987543 35554 4568999999999999999999999999
Q ss_pred cccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCcc-c
Q 038818 268 AYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQ-I 346 (486)
Q Consensus 268 a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~-~ 346 (486)
||+.+..... +. +..+..+.++++.+.|.+......|++++++++...+...... +=........... ..+. .
T Consensus 154 a~~~g~~~~~--~~-~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~--~~~~~~ 227 (376)
T TIGR02379 154 AQGVMSTYKG--RA-LGSIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIRE-KGTNRSQFFRGEV--DKYTWR 227 (376)
T ss_pred ccccCCccCC--cc-cCCCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHH-hCCCCccccccCC--Ccceee
Confidence 9976542211 11 1111123344444445555433467888887765543321110 0000000000000 0000 0
Q ss_pred cCCCC--CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC--C-eEEec-CCC----eeEEEEEeecCCCCCC
Q 038818 347 TLSRR--FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDN--R-FEIVA-PRN----FAVVCFRVLPSASGLG 416 (486)
Q Consensus 347 ~~sr~--~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~--~-~~~~~-~~~----~~~v~f~~~~~~~~~~ 416 (486)
..+.+ ...+.+...+.. .+.+.+..++..+++++..+.|+.++ + .++.. ++. ...+.+.+...
T Consensus 228 ~~g~n~~~~~~~Aa~g~~q--L~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----- 300 (376)
T TIGR02379 228 DIGSSYLPSELQAAYLWAQ--LEQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKDE----- 300 (376)
T ss_pred eecccCCccHHHHHHHHHH--HHHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECCc-----
Confidence 11222 222332222222 36778888899999999999998764 2 23221 111 12333333221
Q ss_pred CCCCccchHHHHHHHHHHHHhcCcEEEeee-eEC---------------------CEeEEEEEecCCCCcHHHHHHHHHH
Q 038818 417 DGKANEGANELNRKLLESINASGQLYVSHG-MVA---------------------GIYFIRFAVGATLTEDRHVIAAWKV 474 (486)
Q Consensus 417 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~---------------------~~~~lR~~~~~~~tt~~did~~i~~ 474 (486)
. ...++.+.|.++|+..-... ... ....+.+- +++..+++|+++++++
T Consensus 301 -----~----~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP-~~~~l~~~~~~~i~~~ 370 (376)
T TIGR02379 301 -----D----DRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLP-LYYGLSKEDQARVIQT 370 (376)
T ss_pred -----C----CHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEcc-CCCCCCHHHHHHHHHH
Confidence 0 12356677777786311000 000 01234443 4788999999999999
Q ss_pred HHHHH
Q 038818 475 VQEKL 479 (486)
Q Consensus 475 l~~~~ 479 (486)
|+++.
T Consensus 371 i~~~~ 375 (376)
T TIGR02379 371 ICDYL 375 (376)
T ss_pred HHHHh
Confidence 98763
No 219
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.77 E-value=5.2e-17 Score=160.88 Aligned_cols=234 Identities=15% Similarity=0.129 Sum_probs=161.1
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ 186 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 186 (486)
.+|...++|+. ++++.|.+ .+++++||++|+..++. +.. +++.|+++...+....
T Consensus 52 ~~p~~~~le~~----lA~leg~~---------~~v~~~sG~aAi~~~l~-~l~-----------~GD~VI~~~~~yg~~~ 106 (364)
T PRK07269 52 KNPTRAKLEET----LAAIESAD---------YALATSSGMSAIVLAFS-VFP-----------VGSKVVAVRDLYGGSF 106 (364)
T ss_pred CCccHHHHHHH----HHHHhCCC---------eEEEeCCHHHHHHHHHH-HhC-----------CCCEEEEecCCcCchH
Confidence 45556666665 56666643 57899999999877663 322 5566767765553322
Q ss_pred HHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEee
Q 038818 187 KAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVD 266 (486)
Q Consensus 187 ~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD 266 (486)
..+....- .. .+.+ .+.+|+++++++|++++ .+|+++.++|++|.+.|+++|+++|+++|+++++|
T Consensus 107 ~~~~~~~~---~~-~~~~----~~~~d~~~l~~~i~~~T------klV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD 172 (364)
T PRK07269 107 RWFNQQEK---EG-RFHF----TYANTEEELIAAIEEDT------DIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVD 172 (364)
T ss_pred HHHHHHHh---cC-cEEE----EecCCHHHHHHhcCcCc------eEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEE
Confidence 22211100 00 1111 23468999999997654 37999999999999999999999999999999999
Q ss_pred ccccchhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCc
Q 038818 267 AAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDW 344 (486)
Q Consensus 267 ~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 344 (486)
++|+......| .. .++|.++.|+||+++++.. .|++++++++...+..... .+
T Consensus 173 ~t~~~~~~~~p-l~------~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~-~~----------------- 227 (364)
T PRK07269 173 NTFYSPIYQRP-IE------LGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNL-NT----------------- 227 (364)
T ss_pred CCCcccccCCc-hh------hCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHH-HH-----------------
Confidence 99866543222 11 2799999999999998765 6777777765543322100 00
Q ss_pred cccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeE-EecCCCeeEEEEEee
Q 038818 345 QITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFE-IVAPRNFAVVCFRVL 409 (486)
Q Consensus 345 ~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~~~~~v~f~~~ 409 (486)
.+.....+.+|..++ |.+.+..++++..+++..+.+.|+++|.++ +..|+..++++|.+.
T Consensus 228 ---~G~~~s~~~a~l~~~--~L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~ 288 (364)
T PRK07269 228 ---TGAVLSPFDSYLLMR--GLKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFKVA 288 (364)
T ss_pred ---hCCCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEEC
Confidence 111235566676666 446789999999999999999999999864 555777889999885
No 220
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.77 E-value=4.3e-16 Score=157.96 Aligned_cols=328 Identities=10% Similarity=0.028 Sum_probs=191.7
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ 186 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 186 (486)
.++...++|++ +++++|.+ ..++++|||+|++.++.+....+..+.+. .+++.|+++..+|.+..
T Consensus 61 ~G~~~~~fe~~----lA~~~g~~---------~~v~~~sGt~al~~aL~al~~~~~~~~~~--~pGd~VIv~~~t~~a~~ 125 (438)
T PRK15407 61 TGRFNDAFEKK----LAEFLGVR---------YALLVNSGSSANLLAFSALTSPKLGDRAL--KPGDEVITVAAGFPTTV 125 (438)
T ss_pred CChhHHHHHHH----HHHHhCCC---------eEEEECCHHHHHHHHHHHHhhccccccCC--CCCCEEEECCCCcHHHH
Confidence 35555566654 66667754 46889999999998887664321111010 15778999999999999
Q ss_pred HHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEee
Q 038818 187 KAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVD 266 (486)
Q Consensus 187 ~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD 266 (486)
.++...|+ .++.++++. .++.+|++++++++.+.+ .+|++++ +.|...++++|.++|+++|+++++|
T Consensus 126 ~~v~~~G~---~pv~vdvd~-~~~~id~~~le~~i~~~t------kaVi~~~---~~G~p~dl~~I~~la~~~gi~vIeD 192 (438)
T PRK15407 126 NPIIQNGL---VPVFVDVEL-PTYNIDASLLEAAVSPKT------KAIMIAH---TLGNPFDLAAVKAFCDKHNLWLIED 192 (438)
T ss_pred HHHHHcCC---EEEEEecCC-CcCCcCHHHHHHHcCcCC------eEEEEeC---CCCChhhHHHHHHHHHHCCCEEEEE
Confidence 99999999 999999875 367999999999987543 3566665 3677789999999999999999999
Q ss_pred ccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccC-------------c-c
Q 038818 267 AAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRN-------------K-A 332 (486)
Q Consensus 267 ~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~-------------~-~ 332 (486)
+|++.+......... .+..+-.+++.+.|.+.+.. .|+++++++.......... .+=.. . .
T Consensus 193 aa~a~G~~~~g~~~G---~~gd~~~fSf~~~k~~~~ge-GG~l~t~d~~l~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~ 267 (438)
T PRK15407 193 NCDALGSTYDGRMTG---TFGDIATLSFYPAHHITMGE-GGAVFTNDPLLKKIIESFR-DWGRDCWCAPGCDNTCGKRFG 267 (438)
T ss_pred CccchhhhcCCeeee---ccCceEEEeCCCCCCccccC-ceEEEECCHHHHHHHHHHH-HhCcccccccccccccccccc
Confidence 999776544322111 11122234444556666543 4888888876643222110 00000 0 0
Q ss_pred CCCC---CccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCC-eEEecC-CCe----eE
Q 038818 333 SDSK---QVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNR-FEIVAP-RNF----AV 403 (486)
Q Consensus 333 ~~~~---~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~-~~~~~~-~~~----~~ 403 (486)
...+ ...+........|-.+..-.+.+++.....+.+++++++..++++++.+.|+.+++ +.+... +.. ..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~ 347 (438)
T PRK15407 268 WQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFG 347 (438)
T ss_pred cccccccccccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEE
Confidence 0000 00000000001122222222333333333477889999999999999999998875 333221 121 12
Q ss_pred EEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEE---Ee-eee----ECC----------------EeEEEEEec
Q 038818 404 VCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLY---VS-HGM----VAG----------------IYFIRFAVG 459 (486)
Q Consensus 404 v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~-~~~----~~~----------------~~~lR~~~~ 459 (486)
+.+.+.+.. .....++.+.|.++|+-. .. +.. +.+ ...+-+= +
T Consensus 348 ~~i~~~~~~------------~~~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP-~ 414 (438)
T PRK15407 348 FPITVKEDA------------GFTRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIG-V 414 (438)
T ss_pred EEEEECCcC------------CCCHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEec-C
Confidence 333333210 011235666777777621 11 100 000 1112222 3
Q ss_pred CCCCcHHHHHHHHHHHHHHHH
Q 038818 460 ATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 460 ~~~tt~~did~~i~~l~~~~~ 480 (486)
++..+++|+++++++|+++.+
T Consensus 415 ~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 415 YPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred CCCCCHHHHHHHHHHHHHHHh
Confidence 667789999999999998764
No 221
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.77 E-value=9e-17 Score=160.26 Aligned_cols=285 Identities=18% Similarity=0.203 Sum_probs=183.8
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHH-
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSAL- 185 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~- 185 (486)
..|....+| +.++++.|.+. .+++++|+.|+..++ .+.. +++.|+++...|.+.
T Consensus 48 ~~p~~~~Le----~~la~l~g~~~---------al~~~SG~~Al~~~l-~~l~-----------pGd~Vi~~~~~y~~t~ 102 (380)
T PRK06176 48 GNPTRFALE----ELIADLEGGVK---------GFAFASGLAGIHAVF-SLFQ-----------SGDHVLLGDDVYGGTF 102 (380)
T ss_pred CChhHHHHH----HHHHHHhCCCC---------EEEECCHHHHHHHHH-HHcC-----------CCCEEEEcCCChhHHH
Confidence 344444555 55788888653 477788887765333 2221 567788887777543
Q ss_pred ---HHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCce
Q 038818 186 ---QKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIW 262 (486)
Q Consensus 186 ---~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~ 262 (486)
...+...|+ +++.++. .|++++++++++++ .+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 103 ~~~~~~~~~~gi---~v~~vd~-------~d~e~l~~ai~~~t------~lV~lesP~Nptg~~~di~~I~~la~~~gi~ 166 (380)
T PRK06176 103 RLFDKVLVKNGL---SCTIIDT-------SDLSQIKKAIKPNT------KALYLETPSNPLLKITDLAQCASVAKDHGLL 166 (380)
T ss_pred HHHHHHHHhcCe---EEEEcCC-------CCHHHHHHhcCcCc------eEEEEECCCCCCceecCHHHHHHHHHHcCCE
Confidence 344566677 7777653 38999999887643 4788899999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccC
Q 038818 263 VHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVD 340 (486)
Q Consensus 263 lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 340 (486)
++||++|+.+....| . . .++|.++.++||++++|.. .|++..+++....+... +..
T Consensus 167 vivD~t~a~~~~~~p-~-----~-~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~-----~~~---------- 224 (380)
T PRK06176 167 TIVDNTFATPYYQNP-L-----L-LGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAF-----FQN---------- 224 (380)
T ss_pred EEEECCccccccCCc-c-----c-cCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHH-----HHH----------
Confidence 999999976433222 1 1 2799999999999998763 66666666544322210 000
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC-----------------CeeE
Q 038818 341 YKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR-----------------NFAV 403 (486)
Q Consensus 341 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------------~~~~ 403 (486)
..+....+...|..++ |.+.+..++++..+++..+.+.|+++|.++-+..| ..++
T Consensus 225 ------~~G~~~~~~~~~l~~~--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~ 296 (380)
T PRK06176 225 ------AIGGVLGPQDSWLLQR--GIKTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGM 296 (380)
T ss_pred ------HhcCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceE
Confidence 0111123344565554 56777888899999999999999999887644221 1457
Q ss_pred EEEEeecCCCCCCCCCCccchHHHHHHHHHHHHh--cCc-------EEEeeee-----E-------CC--EeEEEEEecC
Q 038818 404 VCFRVLPSASGLGDGKANEGANELNRKLLESINA--SGQ-------LYVSHGM-----V-------AG--IYFIRFAVGA 460 (486)
Q Consensus 404 v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~g~-------~~~~~~~-----~-------~~--~~~lR~~~~~ 460 (486)
++|.+.. .+...++.+.|.- .+. ++..+.. . .| .+.+|+|++-
T Consensus 297 ~s~~~~~--------------~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl 362 (380)
T PRK06176 297 LSFTLKN--------------DSEAVAFVESLKLFILGESLGGVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVGI 362 (380)
T ss_pred EEEEECC--------------HHHHHHHHHcCCcceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCcCeEEEEecc
Confidence 8888753 1223455554421 111 1111110 0 12 4689999952
Q ss_pred CCCcHHHHHHHHHHHHHHHHH
Q 038818 461 TLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 461 ~~tt~~did~~i~~l~~~~~~ 481 (486)
||+|.+++.|+++++.
T Consensus 363 -----E~~~dli~dl~~Al~~ 378 (380)
T PRK06176 363 -----EHEQDLLEDLEQAFAK 378 (380)
T ss_pred -----CCHHHHHHHHHHHHhh
Confidence 3678888888877764
No 222
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.77 E-value=2.3e-16 Score=149.15 Aligned_cols=313 Identities=12% Similarity=0.087 Sum_probs=206.3
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCC---
Q 038818 104 NWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQ--- 180 (486)
Q Consensus 104 ~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~--- 180 (486)
.|.......++|..+++...+|||++.. -+=..||+.||+.++.+... |++.|+.-+.
T Consensus 63 yYgGce~VD~vE~laierak~LFga~~a--------nVQPhSGs~AN~av~~All~-----------pGDtimgm~l~~G 123 (413)
T COG0112 63 YYGGCEYVDEVEELAIERAKKLFGAEYA--------NVQPHSGSQANQAVYLALLQ-----------PGDTIMGLDLSHG 123 (413)
T ss_pred ccCCCeeHHHHHHHHHHHHHHHhCCCcc--------ccCCCCchHHHHHHHHHHcC-----------CCCeEecccCCCC
Confidence 4556667889999999999999999754 24456789999877666554 5666654333
Q ss_pred CchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhC
Q 038818 181 THSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYS 260 (486)
Q Consensus 181 ~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g 260 (486)
.|-+...-....|.- -+++..++|+ +++.+|.|++++...+.+ |.+|++ |.+..-..-|++++++||++.|
T Consensus 124 GHltHg~~v~~sG~~-~~~v~Y~vd~-et~~IDyD~~~k~a~e~k-----PK~ii~--G~SaY~r~id~~~~reIad~VG 194 (413)
T COG0112 124 GHLTHGSPVNFSGKL-FNVVSYGVDP-ETGLIDYDEVEKLAKEVK-----PKLIIA--GGSAYSRPIDFKRFREIADEVG 194 (413)
T ss_pred CcccCCCCCCcccee-EEeEeccccc-ccCccCHHHHHHHHHHhC-----CCEEEE--CccccccccCHHHHHHHHHHhC
Confidence 444433222333321 1666777875 368999999999988764 666544 4555667789999999999999
Q ss_pred ceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhc-CCcccccCccCCCCCcc
Q 038818 261 IWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALS-TNPEFLRNKASDSKQVV 339 (486)
Q Consensus 261 ~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~-~~~~y~~~~~~~~~~~~ 339 (486)
++|.+|.||-.+.+....+..- ++.||.+|.+.||+|.+|. .|++++++++...+.-+ ..|+..
T Consensus 195 A~L~~DmAHiaGLVA~G~~p~P---~~~AdvVTtTTHKTlrGPr-GG~Il~~~eel~kkin~aVFPg~q----------- 259 (413)
T COG0112 195 AYLMVDMAHVAGLIAGGVHPNP---LPHADVVTTTTHKTLRGPR-GGIILTNDEELAKKINSAVFPGLQ----------- 259 (413)
T ss_pred ceEEehHHHHHHHHhcccCCCC---CCccceEeCCcccCCCCCC-ceEEEeccHHHHHHhhhhcCCccC-----------
Confidence 9999999997666554443332 4579999999999999997 57888887655443221 222221
Q ss_pred CCCCccccCCCCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC-CCeeEEEEEeecCCCCCCC
Q 038818 340 DYKDWQITLSRRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP-RNFAVVCFRVLPSASGLGD 417 (486)
Q Consensus 340 ~~~~~~~~~sr~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~ 417 (486)
++-.. ...+...+++.....++++..++..++|+.|.+.|.+. |++++.. .+.+++...+.+....
T Consensus 260 --------ggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgTdnHl~lVDl~~~~~~--- 327 (413)
T COG0112 260 --------GGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGGTDNHLVLVDLRSKGLT--- 327 (413)
T ss_pred --------CChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEecCCccceEEEEEcccCCCC---
Confidence 11111 12344556666667889999999999999999999986 8999863 3456666666532110
Q ss_pred CCCccchHHHHHHHHHHHHhcCcEEEeeee------ECCEeEEEEEe---cCCCCcHHHHHHHHHHHHHHHHH
Q 038818 418 GKANEGANELNRKLLESINASGQLYVSHGM------VAGIYFIRFAV---GATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 418 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~------~~~~~~lR~~~---~~~~tt~~did~~i~~l~~~~~~ 481 (486)
.+.... .|.+.|+.+-.-+. ......||+.. +.....++|++++.+.|.+++..
T Consensus 328 -------Gk~ae~---~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 328 -------GKKAEA---ALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred -------HHHHHH---HHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 222222 33344553221111 11245689876 23344667888888888877653
No 223
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.77 E-value=1.9e-16 Score=158.49 Aligned_cols=310 Identities=12% Similarity=0.085 Sum_probs=183.7
Q ss_pred HHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCC
Q 038818 115 ENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGI 194 (486)
Q Consensus 115 e~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~ 194 (486)
.+++.+++++.+|.+ ..++++|||.|+..++.++.-. +++.|+++..+|.+...++...|+
T Consensus 33 ~~~~e~~la~~~g~~---------~~v~~~sgt~al~~~l~~~~~~----------~Gd~Viv~~~t~~~~~~~~~~~G~ 93 (375)
T PRK11706 33 TRRCQQWLEQRFGSA---------KVLLTPSCTAALEMAALLLDIQ----------PGDEVIMPSYTFVSTANAFVLRGA 93 (375)
T ss_pred HHHHHHHHHHHhCCC---------eEEEECCHHHHHHHHHHHhCCC----------CCCEEEECCCCcHHHHHHHHHcCC
Confidence 344556678888764 4789999999976665543111 677899999999999999999999
Q ss_pred CCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhc
Q 038818 195 DPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSAC 274 (486)
Q Consensus 195 g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~ 274 (486)
+++.++++++ ++.+|+++|++++++.+ .+|+.+ +++|...++++|.++|+++|+++++|+||+.+..
T Consensus 94 ---~~v~~d~d~~-~~~~d~~~le~~i~~~t------k~i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~ 160 (375)
T PRK11706 94 ---KIVFVDIRPD-TMNIDETLIEAAITPKT------RAIVPV---HYAGVACEMDTIMALAKKHNLFVVEDAAQGVMST 160 (375)
T ss_pred ---EEEEEecCCC-cCCcCHHHHHHhcCCCC------eEEEEe---CCCCCccCHHHHHHHHHHcCCEEEEECccccccc
Confidence 9999999863 47899999999986533 355554 3589999999999999999999999999976542
Q ss_pred cCccchhhhcCCCCCCceeeccc--cccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCC
Q 038818 275 ICPEFRHFIDGIEGADSFSLNAH--KWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRF 352 (486)
Q Consensus 275 ~~~~~~~~~~~~~~aDsi~~~~h--K~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~ 352 (486)
... +. + + ...|.-++|+| |.+.++ ..|++++.+++...+.......-..... ..........+ ...+..+
T Consensus 161 ~~~--~~-~-g-~~~~~~~~Sf~~~K~l~~g-~gG~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~-~~~g~~~ 232 (375)
T PRK11706 161 YKG--RA-L-G-TIGHIGCFSFHETKNYTAG-EGGALLINDPALIERAEIIREKGTNRSQ-FFRGQVDKYTW-VDIGSSY 232 (375)
T ss_pred cCC--ee-e-e-cCcCEEEEeCCCCcccccc-CCeEEEECCHHHHHHHHHHHHcCCCcch-hhccCCCccee-eeccccc
Confidence 211 11 1 1 12455566666 998653 3466666666544322111000000000 00000000000 0112222
Q ss_pred CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCC---eEEecCC-C----eeEEEEEeecCCCCCCCCCCccch
Q 038818 353 RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNR---FEIVAPR-N----FAVVCFRVLPSASGLGDGKANEGA 424 (486)
Q Consensus 353 ~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~---~~~~~~~-~----~~~v~f~~~~~~~~~~~~~~~~~~ 424 (486)
..-.+-+++.....+.+++..++..++++++.+.|..+++ +++...+ . ...+.+.+.+.
T Consensus 233 ~~~~~~aa~~~~ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 299 (375)
T PRK11706 233 LPSELQAAYLWAQLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDL------------- 299 (375)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCc-------------
Confidence 2111222222122355788888899999999999988762 4432111 1 12333333221
Q ss_pred HHHHHHHHHHHHhcCcEEEe---eee-------E---C---------CEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 425 NELNRKLLESINASGQLYVS---HGM-------V---A---------GIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 425 ~~~~~~l~~~l~~~g~~~~~---~~~-------~---~---------~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
....++.+.|.++|+.... +.. + . ....+-+- +++..+++|++.+++.|+++.
T Consensus 300 -~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP-~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 300 -EDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLP-LFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred -CCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEecc-CCCCCCHHHHHHHHHHHHHHh
Confidence 1134667777777874110 100 0 0 01123333 467888999999999998763
No 224
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.76 E-value=7.1e-16 Score=155.67 Aligned_cols=325 Identities=13% Similarity=0.091 Sum_probs=200.8
Q ss_pred HHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcc
Q 038818 87 AGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIG 166 (486)
Q Consensus 87 ~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 166 (486)
+..+.+.+...+. ....|....+..++.+.+.+|+.+.+|.+... +.....++|+|+++++..++.+..+
T Consensus 43 ~~~~~~a~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~--~~~~~i~it~Ga~~al~~~~~~l~~------- 112 (393)
T TIGR03538 43 PAFVLEALRENLH-GLSTYPTTKGLPELRQAIARWLERRFDLPTGV--DPERHVLPVNGTREALFAFAQAVIN------- 112 (393)
T ss_pred CHHHHHHHHHHhh-ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccC--CCCceEEECCCcHHHHHHHHHHHcC-------
Confidence 4456666665443 23456555556788899999999988765210 0001578899999988776665543
Q ss_pred ccCCCCe--EEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 167 RENISRL--VVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 167 ~~~~~~~--~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
++. .|+++..++..+...++..|+ +++.+|+++++.+.+|+++|++++.+.+ .+|+++.++||||
T Consensus 113 ----~gd~~~vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------k~i~l~~p~NPtG 179 (393)
T TIGR03538 113 ----PGQAPLVVMPNPFYQIYEGAALLAGA---EPYFLNCTAENGFLPDFDAVPESVWRRC------QLLFVCSPGNPTG 179 (393)
T ss_pred ----CCCcceEEecCCCCcchHHHHHhcCC---eEEEeeccccCCCCCCHHHHHHHHhhcc------eEEEEeCCCCCcC
Confidence 333 478888888888888999999 9999999754457899999999886533 3677789999999
Q ss_pred ccCC---chHHHHHHHHhCceEEeeccccchhccCc-cchhhh---cCCC--CC--Cceeecccccc-CCCCcceEEEee
Q 038818 245 TVDP---LGPLCDIAKRYSIWVHVDAAYAGSACICP-EFRHFI---DGIE--GA--DSFSLNAHKWF-FTTLDCCCLWVK 312 (486)
Q Consensus 245 ~idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~-~~~~~~---~~~~--~a--Dsi~~~~hK~l-~~p~~~g~~~~~ 312 (486)
.+-+ +++|+++|++||+++++|.+|........ .....+ ..+. .. -.++.++.|.+ .....+|+++..
T Consensus 180 ~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~ 259 (393)
T TIGR03538 180 AVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGD 259 (393)
T ss_pred cccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecC
Confidence 9866 78899999999999999999975432110 010101 0010 01 14567789954 455678887764
Q ss_pred CchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHhCCC
Q 038818 313 NPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFG-VANLRNFLRSHVRMAQLFQELVGGDN 391 (486)
Q Consensus 313 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~ 391 (486)
+....+..... .+.. .....+..++++..+. .+.+++..+...+..+.+.+.|++.
T Consensus 260 -~~l~~~~~~~~-~~~~--------------------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~- 316 (393)
T TIGR03538 260 -AEILKAFLRYR-TYHG--------------------CAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV- 316 (393)
T ss_pred -HHHHHHHHHHH-Hhhc--------------------cCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 33332211100 0100 0112233333333332 3446666677777788888888764
Q ss_pred CeEEecCCCeeEE-EEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC--------CEeEEEEEecCC
Q 038818 392 RFEIVAPRNFAVV-CFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA--------GIYFIRFAVGAT 461 (486)
Q Consensus 392 ~~~~~~~~~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--------~~~~lR~~~~~~ 461 (486)
+.+. .|..+.+ .+.+. . + ..++.+.+. +.|+.+..+..+. +.+++|++++.
T Consensus 317 -~~~~-~p~gg~f~~~~~~-~-------------~--~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~- 377 (393)
T TIGR03538 317 -LDLE-LPDAGFYLWPKVP-G-------------D--DEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA- 377 (393)
T ss_pred -Cccc-CCCeeEEEEEECC-C-------------C--HHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC-
Confidence 3333 3444443 44443 1 1 134555554 4677554443321 24689999853
Q ss_pred CCcHHHHHHHHHHHHHH
Q 038818 462 LTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 462 ~tt~~did~~i~~l~~~ 478 (486)
+++++++.++.|.+.
T Consensus 378 --~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 378 --PLEECVEAAERIRSF 392 (393)
T ss_pred --CHHHHHHHHHHHHHh
Confidence 467888888888764
No 225
>PRK07908 hypothetical protein; Provisional
Probab=99.76 E-value=3.3e-16 Score=155.50 Aligned_cols=305 Identities=15% Similarity=0.109 Sum_probs=191.5
Q ss_pred CHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHH
Q 038818 85 SIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNE 164 (486)
Q Consensus 85 ~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~ 164 (486)
.+|..+.+.+...++. ...|....... ++++++++.+|.+++ ++++|+|+++++..++. . .
T Consensus 35 ~~~~~~~~~~~~~~~~-~~~Y~~~~g~~----~lr~aia~~~~~~~~-------~I~it~Ga~~al~~~~~-l-~----- 95 (349)
T PRK07908 35 TPPEWLRERLAARLGD-LAAYPSTEDER----RARAAVAARHGRTPD-------EVLLLAGAAEGFALLAR-L-R----- 95 (349)
T ss_pred CCCHHHHHHHHHHhhH-hhcCCCccchH----HHHHHHHHHhCcChh-------hEEECCCHHHHHHHHHh-c-C-----
Confidence 3444455655554432 12343222323 355666777788765 78999999998865544 1 1
Q ss_pred ccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 165 IGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 165 ~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
++.++ +...++......++..|+ +++.+|+++ ++.+|+++++ +. +.+++++.++|+||
T Consensus 96 ------~~~vi-v~~P~y~~~~~~~~~~G~---~i~~v~~~~--~~~~d~~~l~----~~------~~~i~l~np~NPTG 153 (349)
T PRK07908 96 ------PRRAA-VVHPSFTEPEAALRAAGI---PVHRVVLDP--PFRLDPAAVP----DD------ADLVVIGNPTNPTS 153 (349)
T ss_pred ------CCeEE-EeCCCChHHHHHHHHcCC---EEEeeccCc--ccCcChhHhc----cC------CCEEEEcCCCCCCC
Confidence 33333 455677777788889999 999999975 3789998653 21 23677889999999
Q ss_pred ccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceee-ccccccC-CCCcceEEEeeCchHHHHHhc
Q 038818 245 TVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSL-NAHKWFF-TTLDCCCLWVKNPNALIKALS 322 (486)
Q Consensus 245 ~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~-~~hK~l~-~p~~~g~~~~~~~~~~~~~~~ 322 (486)
.+-|.++|.++|++ +.++++|++|+-.. .. .... +.....-+.+.+ +++|.++ ....+|+++.. +..+.....
T Consensus 154 ~~~~~~~l~~l~~~-~~~iIvDe~y~~~~-~~-~~~~-l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~-~~~~~~~~~ 228 (349)
T PRK07908 154 VLHPAEQLLALRRP-GRILVVDEAFADAV-PG-EPES-LAGDDLPGVLVLRSLTKTWSLAGLRVGYALGA-PDVLARLTR 228 (349)
T ss_pred CCcCHHHHHHHHhc-CCEEEEECcchhhc-cC-Cccc-cccccCCCEEEEeecccccCCccceeeeeecC-HHHHHHHHh
Confidence 99999999999975 88999999996542 11 1111 111112345655 7899887 55568988864 333332211
Q ss_pred CCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC
Q 038818 323 TNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF---GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR 399 (486)
Q Consensus 323 ~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 399 (486)
....+ . ...+...+....+ +.+.++++.++..++++++.+.|+++ ++++..++
T Consensus 229 ~~~~~-----------------~------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~ 284 (349)
T PRK07908 229 GRAHW-----------------P------VGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GARVVDPA 284 (349)
T ss_pred cCCCC-----------------C------ccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcEeccCC
Confidence 11100 0 0111111111111 23456677788888899999999887 78877556
Q ss_pred CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 038818 400 NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQE 477 (486)
Q Consensus 400 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~~ 477 (486)
..+.+.+.+.. ...+.+.+.++|+.+..+..+. +..++|+++. +++++++++++|++
T Consensus 285 ~g~~~~~~~~~-----------------~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~----~~~~~~~l~~al~~ 343 (349)
T PRK07908 285 AAPFVLVRVPD-----------------AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR----PRAEVPVLVQALAE 343 (349)
T ss_pred CceEEEEECCc-----------------HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC----CCccHHHHHHHHHH
Confidence 66666665532 1345666667787554443332 3579999984 45699999999988
Q ss_pred HHH
Q 038818 478 KLD 480 (486)
Q Consensus 478 ~~~ 480 (486)
+..
T Consensus 344 ~~~ 346 (349)
T PRK07908 344 ILK 346 (349)
T ss_pred HHh
Confidence 753
No 226
>PRK08175 aminotransferase; Validated
Probab=99.76 E-value=1.2e-15 Score=154.06 Aligned_cols=318 Identities=14% Similarity=0.093 Sum_probs=198.2
Q ss_pred ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCC
Q 038818 102 GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQT 181 (486)
Q Consensus 102 ~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~ 181 (486)
...|....+..++.+.+.+|+.+.+|++... ....++|+|+++++...+..... +++.|+++..+
T Consensus 60 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~----~~~i~~t~G~~~~l~~~~~~~~~-----------~gd~Vlv~~P~ 124 (395)
T PRK08175 60 THGYSTSRGIPRLRRAISRWYQDRYDVDIDP----ESEAIVTIGSKEGLAHLMLATLD-----------HGDTVLVPNPS 124 (395)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEccCcHHHHHHHHHHhCC-----------CCCEEEEcCCC
Confidence 3456555567889999999999887764321 01578899988887655443332 56788889999
Q ss_pred chHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCc---hHHHHHHHH
Q 038818 182 HSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPL---GPLCDIAKR 258 (486)
Q Consensus 182 H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl---~~I~~i~~~ 258 (486)
|......++..|+ +++.+|++++ ..++++|+++++... ..+.+|+++.++|++|.+-+. ++|+++|++
T Consensus 125 y~~~~~~~~~~g~---~~~~v~~~~~---~~~~~~l~~~l~~~~---~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~ 195 (395)
T PRK08175 125 YPIHIYGAVIAGA---QVRSVPLVEG---VDFFNELERAIRESY---PKPKMMILGFPSNPTAQCVELEFFEKVVALAKR 195 (395)
T ss_pred CcchHHHHHHcCC---eEEEEecccC---CCcHHHHHHHHhhcc---CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 9888888889999 9999999753 345889988886421 124577778889999998766 799999999
Q ss_pred hCceEEeeccccchhccCccchhhhcCCCC-CC--ceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCC
Q 038818 259 YSIWVHVDAAYAGSACICPEFRHFIDGIEG-AD--SFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASD 334 (486)
Q Consensus 259 ~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~-aD--si~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~ 334 (486)
||+++++|.+|+.... .......+..+.. .| .++.++.|.++.| ..+|+++. +++... .+.....+...
T Consensus 196 ~~i~ii~De~y~~l~~-~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~-~~~l~~-~~~~~~~~~~~---- 268 (395)
T PRK08175 196 YDVLVVHDLAYADIVY-DGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVG-NPELVS-ALARIKSYHDY---- 268 (395)
T ss_pred cCcEEEEecchHhhcc-CCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeC-CHHHHH-HHHHHHhhccc----
Confidence 9999999999975432 1110111111111 23 4467899999755 44677664 444433 22111111000
Q ss_pred CCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCC
Q 038818 335 SKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSA 412 (486)
Q Consensus 335 ~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~ 412 (486)
+ .......++...+ ....++++.+...+.++++.+.|++. ++.+..+.....+.+.+.+..
T Consensus 269 -------------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~~g~~i~i~l~~~~ 331 (395)
T PRK08175 269 -------------G---TFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEA-GWMVEMPKASMYVWAKIPEPY 331 (395)
T ss_pred -------------C---CCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCEEEEEEEECCccc
Confidence 0 0111112222222 23446666777778888999999887 676553444555566654321
Q ss_pred CCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 413 SGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
.. .....+.+++. +.|+.+.++..+. +..++|+++. .+++.+.+.++.|.+++++
T Consensus 332 ---------~~--~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~---~~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 332 ---------AA--MGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALI---ENRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred ---------CC--CCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeC---CCHHHHHHHHHHHHHHHHh
Confidence 00 00235555554 4677544433332 3468999984 3567888888888887754
No 227
>PRK09105 putative aminotransferase; Provisional
Probab=99.76 E-value=6.4e-16 Score=154.32 Aligned_cols=281 Identities=12% Similarity=0.073 Sum_probs=186.7
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDP 196 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~ 196 (486)
++++.+++.+|++++ ++++|+|+++++..++.+..+ +++.|+++..+|..+...++..|+
T Consensus 82 ~Lr~aia~~~~v~~e-------~I~it~Gs~~ai~~~~~~l~~-----------~gd~Vli~~P~y~~~~~~~~~~g~-- 141 (370)
T PRK09105 82 DLRTLFAAQEGLPAD-------HVMAYAGSSEPLNYAVLAFTS-----------PTAGLVTADPTYEAGWRAADAQGA-- 141 (370)
T ss_pred HHHHHHHHHhCcChh-------hEEEcCChHHHHHHHHHHHcC-----------CCCEEEEeCCChHHHHHHHHHcCC--
Confidence 455667888898765 789999999988777665533 566788898999999999999999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHH--hCceEEeeccccchhc
Q 038818 197 KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKR--YSIWVHVDAAYAGSAC 274 (486)
Q Consensus 197 ~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~--~g~~lhvD~a~g~~~~ 274 (486)
+++.+|.++ ++.+|++.+++. .+. +.+|+++.++||||.+-+.++|.++++. +++|+++|++|..+.
T Consensus 142 -~~~~v~~~~--~~~~d~~~l~~~-~~~------~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~- 210 (370)
T PRK09105 142 -PVAKVPLRA--DGAHDVKAMLAA-DPN------AGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFS- 210 (370)
T ss_pred -eEEEecCCC--CCCCCHHHHHhc-CCC------CCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhc-
Confidence 999999875 568999999875 221 2367888999999999998888888764 489999999995432
Q ss_pred cCccchhhhcCCCCCCceee-ccccccCC-CCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCC
Q 038818 275 ICPEFRHFIDGIEGADSFSL-NAHKWFFT-TLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRF 352 (486)
Q Consensus 275 ~~~~~~~~~~~~~~aDsi~~-~~hK~l~~-p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~ 352 (486)
..+....... ...+.+++ ++.|.++. ...+|+++... ......... . + . ..
T Consensus 211 ~~~s~~~~~~--~~~~vi~~~SfSK~~g~~GlRiG~~v~~~-~~i~~l~~~-~-~--------------------~--~~ 263 (370)
T PRK09105 211 DAPSVVDLVA--QRKDLIVLRTFSKLYGMAGMRLGLAAARP-DLLAKLARF-G-H--------------------N--PL 263 (370)
T ss_pred cCcchHHHHh--hCCCEEEEecccHhhcCCccceeeeecCH-HHHHHHHhc-C-C--------------------C--Cc
Confidence 1111111110 13455554 67798874 34588877643 333222111 0 0 0 01
Q ss_pred CchHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHH
Q 038818 353 RALKLWLVLRSFG-VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKL 431 (486)
Q Consensus 353 ~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l 431 (486)
......++...+. .+.+++..++..++.+++.+.|++. ++++. ++..+.+.+.+... ..++
T Consensus 264 ~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~~~f~~~~~~~~----------------~~~l 325 (370)
T PRK09105 264 PVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK-GYKCT-PSQANCFMVDVKRP----------------AKAV 325 (370)
T ss_pred CHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCCcC-CCCCcEEEEeCCCC----------------HHHH
Confidence 2223333444332 3456667778888899999999886 77765 45556555444211 2456
Q ss_pred HHHHHhcCcEEEeeeeEC-CEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 432 LESINASGQLYVSHGMVA-GIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 432 ~~~l~~~g~~~~~~~~~~-~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
.+.|.++|+. +.. .+. ..+++|+++. +++++++++++|+++.
T Consensus 326 ~~~L~~~gI~-v~~-~~~~~~~~~Ris~~----~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 326 ADAMAKQGVF-IGR-SWPIWPNWVRVTVG----SEEEMAAFRSAFAKVM 368 (370)
T ss_pred HHHHHHCCcE-Eec-CCCCCCCeEEEEcC----CHHHHHHHHHHHHHHh
Confidence 7777777875 322 222 2578999985 4568999999998764
No 228
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.76 E-value=2e-16 Score=157.73 Aligned_cols=215 Identities=17% Similarity=0.179 Sum_probs=149.7
Q ss_pred HHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH----HHH
Q 038818 115 ENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK----AAQ 190 (486)
Q Consensus 115 e~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~----a~~ 190 (486)
..++.+.++++.|.+. .+++++|+.++..++ .... +++.|+++...|.+... .+.
T Consensus 52 ~~~Le~~lA~l~g~~~---------~~~~~sG~aai~~~~-~~l~-----------~Gd~Viv~~~~y~~~~~~~~~~~~ 110 (377)
T PRK07671 52 RAALEELIAVLEGGHA---------GFAFGSGMAAITAVM-MLFS-----------SGDHVILTDDVYGGTYRVMTKVLN 110 (377)
T ss_pred HHHHHHHHHHHhCCCc---------eEEeCCHHHHHHHHH-HHhC-----------CCCEEEECCCccchHHHHHHHHHh
Confidence 3344456888888653 467777776654332 2211 56678888887764332 344
Q ss_pred HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeecccc
Q 038818 191 IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYA 270 (486)
Q Consensus 191 ~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g 270 (486)
..|+ +++.++. .|+++++++|++++ .+|+++.++|++|.+.|+++|+++|+++|+++++|++|+
T Consensus 111 ~~G~---~v~~v~~-------~d~~~l~~ai~~~t------klV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~ 174 (377)
T PRK07671 111 RFGI---EHTFVDT-------SNLEEVEEAIRPNT------KAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFM 174 (377)
T ss_pred cCCe---EEEEECC-------CCHHHHHHhcCCCC------eEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCC
Confidence 5677 7877753 38899999987644 478889999999999999999999999999999999997
Q ss_pred chhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccC
Q 038818 271 GSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITL 348 (486)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 348 (486)
......+ .. .++|.++.+++|++++|.+ .|+++++++....+..... .+.
T Consensus 175 ~~~~~~p-~~------~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~-~~~-------------------- 226 (377)
T PRK07671 175 TPYWQSP-IS------LGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQ-NST-------------------- 226 (377)
T ss_pred ccccCCh-hh------hCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHH-Hhh--------------------
Confidence 6433221 11 2789999999999998853 6667777665543222110 111
Q ss_pred CCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe
Q 038818 349 SRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIV 396 (486)
Q Consensus 349 sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 396 (486)
+-.......|..++ |.+.+..++++..+++..+.+.|+++|++.-+
T Consensus 227 g~~~~~~~a~l~~~--~l~tl~~R~~~~~~na~~la~~L~~~~~v~~v 272 (377)
T PRK07671 227 GGILGPQDSWLLLR--GLKTLGIRMEEHETNSRAIAEFLNNHPAVNKV 272 (377)
T ss_pred cCCCCHHHHHHHHc--CcChHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence 11223455666665 45667788999999999999999999887554
No 229
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.76 E-value=1.9e-16 Score=158.02 Aligned_cols=231 Identities=19% Similarity=0.173 Sum_probs=159.9
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH-HcCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ-IAGID 195 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~-~~G~g 195 (486)
++.+.++++.|.+ .+++++||++|+..++.+... +++.|+++...|.+....+. +.+.+
T Consensus 55 ~le~~lA~l~g~~---------~v~~~~gg~~Ai~~~l~all~-----------~GD~Vl~~~p~y~~~~~~~~~~~~~~ 114 (382)
T TIGR02080 55 LLQQALAELEGGA---------GAVVTNTGMSAIHLVTTALLG-----------PDDLLVAPHDCYGGTYRLLNALAKKG 114 (382)
T ss_pred HHHHHHHHHhCCC---------cEEEEcCHHHHHHHHHHHHcC-----------CCCEEEEcCCCcHHHHHHHHHHHhhc
Confidence 3445678887732 578999999988776665432 56778888888876444332 23221
Q ss_pred CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhcc
Q 038818 196 PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACI 275 (486)
Q Consensus 196 ~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~ 275 (486)
.-++..++ ..|++++++++++.+ .+|+++.++|++|.+-|+++|+++|+++|+++++|++|+.+...
T Consensus 115 ~~~v~~~d-------~~d~~~l~~ai~~~t------klV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~ 181 (382)
T TIGR02080 115 CFRVLFVD-------QGDEQALRAALAQKP------KLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQ 181 (382)
T ss_pred CeEEEEEC-------CCCHHHHHHhcCcCc------eEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccC
Confidence 11444442 238899999887543 47888999999999999999999999999999999999765432
Q ss_pred CccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCC
Q 038818 276 CPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFR 353 (486)
Q Consensus 276 ~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~ 353 (486)
.+ .. .++|.++.+++||++++.+ .|++.+++++...+.. ....++ +....
T Consensus 182 ~p-l~------~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~-~~~~~~--------------------g~~~s 233 (382)
T TIGR02080 182 NP-LA------LGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELA-WWANNL--------------------GVTGG 233 (382)
T ss_pred Cc-hh------hCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHH-HHHHcc--------------------CCCCC
Confidence 21 11 1689999999999998765 6777777665433221 111111 11235
Q ss_pred chHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe-cC-----C-----------CeeEEEEEeec
Q 038818 354 ALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIV-AP-----R-----------NFAVVCFRVLP 410 (486)
Q Consensus 354 ~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~-----~-----------~~~~v~f~~~~ 410 (486)
.+..|..++ |.+.+..++++..+++..+.++|+++|.++-+ .| | ..++++|.+..
T Consensus 234 p~~a~l~lr--~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 305 (382)
T TIGR02080 234 AFDSYLTLR--GLRTLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKG 305 (382)
T ss_pred HHHHHHHHc--ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecC
Confidence 566677766 55788888999999999999999999987643 22 1 14588888853
No 230
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.76 E-value=2.2e-16 Score=155.35 Aligned_cols=273 Identities=14% Similarity=0.060 Sum_probs=175.9
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCC
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGID 195 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g 195 (486)
.++++++++++|.+++ ..++|+|+++++..+ ..+.. ++ .|++...+|.++...++..|+
T Consensus 50 ~~lr~~la~~~~~~~~-------~i~~t~G~~~~i~~~-~~~l~-----------~g-~vl~~~p~y~~~~~~~~~~g~- 108 (330)
T TIGR01140 50 DELRAAAAAYYGLPAA-------SVLPVNGAQEAIYLL-PRLLA-----------PG-RVLVLAPTYSEYARAWRAAGH- 108 (330)
T ss_pred HHHHHHHHHHhCCChh-------hEEECCCHHHHHHHH-HHHhC-----------CC-eEEEeCCCcHHHHHHHHHcCC-
Confidence 4566778888887654 678888888776543 22221 34 466777889899999999999
Q ss_pred CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHHHhCceEEeeccccch
Q 038818 196 PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAKRYSIWVHVDAAYAGS 272 (486)
Q Consensus 196 ~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~~~g~~lhvD~a~g~~ 272 (486)
+++.++ |++.|++++++ + .+|+++.++|++|.+-| +++|+++|+++|+++++|.+|..+
T Consensus 109 --~~~~~~---------d~~~l~~~~~~-~------~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~ 170 (330)
T TIGR01140 109 --EVVELP---------DLDRLPAALEE-L------DVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDF 170 (330)
T ss_pred --EEEEeC---------CHHHHHhhccc-C------CEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECccccc
Confidence 888775 77888888742 2 26778899999999988 677788889999999999999765
Q ss_pred hccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC
Q 038818 273 ACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR 351 (486)
Q Consensus 273 ~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~ 351 (486)
.. .+....... ...-+.+..+++|+++.| ..+|+++.+++ .+......... + .
T Consensus 171 ~~-~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~-~~~~l~~~~~~-----------------~------~ 224 (330)
T TIGR01140 171 TP-DASLAPQAA-RFPGLVVLRSLTKFFGLAGLRLGFVVAHPA-LLARLREALGP-----------------W------T 224 (330)
T ss_pred CC-ccchhhHhc-cCCCEEEEEecchhhcCchhhhhheeCCHH-HHHHHHhcCCC-----------------C------C
Confidence 42 111111111 113457788999999844 56788887654 33322111110 0 0
Q ss_pred CCchHHHHHHHHhchH-HHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHH
Q 038818 352 FRALKLWLVLRSFGVA-NLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRK 430 (486)
Q Consensus 352 ~~~l~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 430 (486)
...+...++.+.+... ..+...++..++.+++.+.|++++.+++. ++....+.+.+.+ ..+
T Consensus 225 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~f~~~~~~~-----------------~~~ 286 (330)
T TIGR01140 225 VNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLGGLEVV-GGTALFLLVRTPD-----------------AAA 286 (330)
T ss_pred chHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCeEEEEEcCC-----------------HHH
Confidence 1223334444444333 34566778888999999999998666654 3333333333221 235
Q ss_pred HHHHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHH
Q 038818 431 LLESINASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVV 475 (486)
Q Consensus 431 l~~~l~~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l 475 (486)
+.++|.++|+.+.++..+. +..++|+++.. ..++ ++++++|
T Consensus 287 l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~~~---~~~~-~~~~~~l 329 (330)
T TIGR01140 287 LHEALARRGILIRDFDNFPGLDPRYLRFALPT---DEEN-DRLEEAL 329 (330)
T ss_pred HHHHHHHCCEEEEECCCCCCCCCCEEEEEecC---HHHH-HHHHHhh
Confidence 6777878887655544443 35689999853 3345 8888776
No 231
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.76 E-value=1.6e-16 Score=155.74 Aligned_cols=336 Identities=11% Similarity=0.085 Sum_probs=190.8
Q ss_pred cceecCCCCCHHHHHHHHHHhhc-CCCcc------ccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchH
Q 038818 76 YFAYFPSSGSIAGFLGEMLSSGF-NVVGF------NWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCE 148 (486)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~-n~~~~------~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~ 148 (486)
-+..+++.......+.+++.+.+ |.+.. .|.......++|.-+.+.++++||+++..++ .-+=..||+.
T Consensus 22 ~l~LiaSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~----anvqp~SGs~ 97 (399)
T PF00464_consen 22 TLNLIASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWY----ANVQPHSGSQ 97 (399)
T ss_dssp SEE-CTT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEE----EE---SSHHH
T ss_pred CccccCcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccce----EEeecCCchH
Confidence 35556655444444445544433 33322 2334456789999999999999999854211 2344668899
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEecC---CCchHHHHHHHH-------cCCCCCCeEEEecCCCCCcccCHHHHH
Q 038818 149 AILCTLAAARDQILNEIGRENISRLVVYGSD---QTHSALQKAAQI-------AGIDPKNFRAIKTTKSSSFTLTPESLQ 218 (486)
Q Consensus 149 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~---~~H~s~~~a~~~-------~G~g~~~v~~v~~d~~~~~~~d~~~L~ 218 (486)
||+.++.+... +++.|+.-. -.|.|....... ... +++.+++|++ ++.+|.++++
T Consensus 98 An~av~~aLl~-----------pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~---~~~~y~~d~~-~~~ID~d~l~ 162 (399)
T PF00464_consen 98 ANLAVYMALLK-----------PGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYF---ESVPYPVDPD-TGLIDYDELE 162 (399)
T ss_dssp HHHHHHHHHT------------TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHS---EEEEEEB-TT-TSSB-HHHHH
T ss_pred HHHHHHHHHHh-----------hcCcEEecChhhcccccccccccccccccccceE---EEEeeeeecC-CCeECHHHHH
Confidence 99877776654 555554332 246654333222 234 6778888863 6899999999
Q ss_pred HHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeecccc
Q 038818 219 AAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHK 298 (486)
Q Consensus 219 ~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK 298 (486)
+.+++.+ |.+|++-. +..-..-|++++++||++.|++|++|++|-.+.+....+..-+ +.||.++.++||
T Consensus 163 ~~a~~~k-----PklIi~G~--S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~---~~ADvvt~sThK 232 (399)
T PF00464_consen 163 KLAKEHK-----PKLIICGA--SSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPF---PYADVVTGSTHK 232 (399)
T ss_dssp HHHHHH-------SEEEEE---SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GC---CTSSEEEEESSG
T ss_pred HHHhhcC-----CCEEEECc--hhccCccCHHHHHHHHHhcCcEEEecccccccceehheecCcc---ccceEEEeeccc
Confidence 9988764 66655543 2334567899999999999999999999987776554444333 479999999999
Q ss_pred ccCCCCcceEEEee-------------CchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCC-CchHHHHHHHHh
Q 038818 299 WFFTTLDCCCLWVK-------------NPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRF-RALKLWLVLRSF 364 (486)
Q Consensus 299 ~l~~p~~~g~~~~~-------------~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~-~~l~~~~~l~~~ 364 (486)
.|.+|. +|+++++ +++... .+.. .++. +.+++-.. ...++..+++..
T Consensus 233 tl~GPr-ggiI~~~~~~~~~~~~~~~~~~~l~~-~I~~---avfP--------------~~qg~~h~~~iaalAval~ea 293 (399)
T PF00464_consen 233 TLRGPR-GGIILTNKGSKNVDKKGKEIDEELAE-KIDS---AVFP--------------GLQGGPHMHRIAALAVALKEA 293 (399)
T ss_dssp GG-SSS--EEEEES-SEEEE-TTS-EEEHHHHH-HHHH---HHTT--------------TT-SS--HHHHHHHHHHHHHH
T ss_pred cccccC-ceEEEEcCCccccCCcccccHHHHHH-Hhcc---ccCC--------------CcccCcchhHHHHHHHHHhcc
Confidence 999997 5888888 232221 1110 0111 11111111 224455566665
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEec-CCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEE
Q 038818 365 GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVA-PRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYV 443 (486)
Q Consensus 365 g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 443 (486)
....+++..++..++|+.|.+.|.+. |++++. ..+.++|.+.+.+... ..++..+.|.+.|+. +
T Consensus 294 ~~~~fk~Ya~qVv~NAk~La~~L~~~-G~~v~~ggTd~H~vlvd~~~~~~-------------~g~~a~~~Le~~gI~-v 358 (399)
T PF00464_consen 294 LSPEFKEYAKQVVKNAKALAEALQER-GFKVVTGGTDNHQVLVDLRSFGI-------------DGKEAEKALEEAGII-V 358 (399)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHT-T-EEGGGS-SSSEEEEEGGGGTS--------------HHHHHHHHHHTTEE--
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhhC-CcEEEECCCCCCeEEEEeccccc-------------chHHHHHHHHhcCee-e
Confidence 55677899999999999999999997 999985 3456788887764311 123344455566764 3
Q ss_pred eeeeEC------CEeEEEEEec---CCCCcHHHHHHHHHH
Q 038818 444 SHGMVA------GIYFIRFAVG---ATLTEDRHVIAAWKV 474 (486)
Q Consensus 444 ~~~~~~------~~~~lR~~~~---~~~tt~~did~~i~~ 474 (486)
....+. ....||+... .....++|+.++.+.
T Consensus 359 nkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~ 398 (399)
T PF00464_consen 359 NKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAEL 398 (399)
T ss_dssp EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHHH
T ss_pred cccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHhh
Confidence 322221 1457999872 234456677666554
No 232
>PRK05939 hypothetical protein; Provisional
Probab=99.75 E-value=1.1e-16 Score=160.34 Aligned_cols=239 Identities=11% Similarity=0.057 Sum_probs=152.1
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCch---
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHS--- 183 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~--- 183 (486)
..|....+|++ ++++.|.+. .+++++|+.|+..++.+... +++.|+++...|.
T Consensus 45 g~p~~~~lE~~----la~leg~~~---------~v~~ssG~~Ai~~~l~all~-----------~Gd~Vv~~~~~y~~t~ 100 (397)
T PRK05939 45 GTPTTAALEAK----ITKMEGGVG---------TVCFATGMAAIAAVFLTLLR-----------AGDHLVSSQFLFGNTN 100 (397)
T ss_pred CCHHHHHHHHH----HHHHhCCCe---------EEEeCCHHHHHHHHHHHHcC-----------CCCEEEECCCccccHH
Confidence 44666666655 677777653 46777778777766655432 5667777877654
Q ss_pred HHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceE
Q 038818 184 ALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWV 263 (486)
Q Consensus 184 s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~l 263 (486)
++...+...|+ +++.+++ .|+++|++++++.+ .+|+++.++|++|.+.|+++|+++|+++|+++
T Consensus 101 ~~~~~l~~~G~---~v~~v~~-------~d~e~l~~~l~~~t------klV~vesp~NptG~v~dl~~I~~la~~~gi~l 164 (397)
T PRK05939 101 SLFGTLRGLGV---EVTMVDA-------TDVQNVAAAIRPNT------RMVFVETIANPGTQVADLAGIGALCRERGLLY 164 (397)
T ss_pred HHHHHHHhcCC---EEEEECC-------CCHHHHHHhCCCCC------eEEEEECCCCCCCCHHhHHHHHHHHHHcCCEE
Confidence 34455677788 8888875 27899999886543 47888999999999999999999999999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCc-ceEEEeeCchH-HHHHhcCCcccccCccCCCCCccCC
Q 038818 264 HVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD-CCCLWVKNPNA-LIKALSTNPEFLRNKASDSKQVVDY 341 (486)
Q Consensus 264 hvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~~~~~~-~~~~~~~~~~y~~~~~~~~~~~~~~ 341 (486)
+||++++.+..+.+. . -++|.+..++||+++++.. .|.+++.+... ..........|....... ......
T Consensus 165 ivD~t~a~~~~~~~~-~------~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 236 (397)
T PRK05939 165 VVDNTMTSPWLFRPK-D------VGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQ-WGLTQI 236 (397)
T ss_pred EEECCcccccccCcc-c------cCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhh-HHHHHH
Confidence 999999765432211 1 1799999999999997543 24444422210 000000000000000000 000000
Q ss_pred C-CccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Q 038818 342 K-DWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEI 395 (486)
Q Consensus 342 ~-~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 395 (486)
. ......+-...+...|+.++ |.+.+..++++..+++..+++.|+++|.++-
T Consensus 237 ~~~~~~~~G~~~~p~~a~l~~r--gl~tl~~R~~~~~~na~~la~~L~~~p~V~~ 289 (397)
T PRK05939 237 RKKGLRDMGATLSSEAAHRIAI--GAETLALRVDRSCSNALALAQFLEAHPKVAR 289 (397)
T ss_pred HHHHHHhcCCCCCHHHHHHHHc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccE
Confidence 0 00001122234455565554 6788999999999999999999999998743
No 233
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.75 E-value=1.5e-15 Score=151.55 Aligned_cols=291 Identities=10% Similarity=0.001 Sum_probs=186.2
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCC-eEEEecCCCchHHHHHHHHcCC
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISR-LVVYGSDQTHSALQKAAQIAGI 194 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~a~~~~G~ 194 (486)
.++++.+++.+|++++ +.++|+|+++++..++.+... ++ ..|+++...+..+...++..|+
T Consensus 62 ~~lr~~ia~~~~~~~~-------~I~~t~G~~~~l~~~~~~~~~-----------~g~~~vlv~~p~y~~~~~~~~~~g~ 123 (364)
T PRK04781 62 PGLRSALAALYGCAPE-------QLLIGRGSDEAIDLLVRALCV-----------PGRDAVLVTPPVFGMYAVCARLQNA 123 (364)
T ss_pred HHHHHHHHHHhCcChH-------HEEEeCCHHHHHHHHHHHhcC-----------CCCCeEEEcCCChHHHHHHHHHcCC
Confidence 3455667777788765 789999999888766654432 34 5677887777667777888999
Q ss_pred CCCCeEEEecCCC-CCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHH--hCceEEeeccccc
Q 038818 195 DPKNFRAIKTTKS-SSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKR--YSIWVHVDAAYAG 271 (486)
Q Consensus 195 g~~~v~~v~~d~~-~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~--~g~~lhvD~a~g~ 271 (486)
+++.+|.+.+ +.+.+|++++++.+... .+.+|+++.++|+||.+-|.+++.++++. +++++++|++|..
T Consensus 124 ---~~~~v~~~~~~~~~~~d~~~l~~~~~~~-----~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~ 195 (364)
T PRK04781 124 ---PLVEVPLVDGADGFHADVPAIVAAALAS-----NAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGE 195 (364)
T ss_pred ---EEEEEecCCCccCCCcCHHHHHHHHhcc-----CCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchh
Confidence 9999998532 24578999886654321 13467778999999999998888888765 4799999999976
Q ss_pred hhccCccchhhhcCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCC
Q 038818 272 SACICPEFRHFIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSR 350 (486)
Q Consensus 272 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr 350 (486)
+.. .+........... -.+.-++.|.++ ...-+|+++.. ++...........|-
T Consensus 196 f~~-~~~~~~~~~~~~~-vi~~~SfSK~~gl~GlRvGy~v~~-~~l~~~l~~~~~~~~---------------------- 250 (364)
T PRK04781 196 FSD-VPSAVGLLARYDN-LAVLRTLSKAHALAAARIGSLIAN-AELIAVLRRCQAPYP---------------------- 250 (364)
T ss_pred hcC-CcchHHHHhhCCC-EEEEecChhhcccccceeeeeeCC-HHHHHHHHhccCCCC----------------------
Confidence 432 1111111111111 145677899998 45668887754 334332222111110
Q ss_pred CCCchHHHHHHHHh--c-hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHH
Q 038818 351 RFRALKLWLVLRSF--G-VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANEL 427 (486)
Q Consensus 351 ~~~~l~~~~~l~~~--g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~ 427 (486)
...+...++...+ + .+...+.+++..+.++.+.+.|++++++..+.++..+.+.+++..
T Consensus 251 -~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~----------------- 312 (364)
T PRK04781 251 -VPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFDD----------------- 312 (364)
T ss_pred -CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcCC-----------------
Confidence 1122223333333 2 234556666777788899999998877754445555555555431
Q ss_pred HHHHHHHHHhcCcEEEeeeeEC-CEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 428 NRKLLESINASGQLYVSHGMVA-GIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 428 ~~~l~~~l~~~g~~~~~~~~~~-~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
.+++.+.+.++|+.+..+..+. ...++|+++. +.++.++++++|+++.
T Consensus 313 ~~~~~~~l~~~gI~v~~~~~~~~~~~~~Ris~~----~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 313 AEAAFQALLAAGVVVRDQRAAPRLSDALRITLG----TPEQNDRVLAALQRTQ 361 (364)
T ss_pred HHHHHHHHHHCCeEEeeCCCCCCCCCeEEEeCC----CHHHHHHHHHHHHHHH
Confidence 2356677778888655443332 2568999985 4668999999998753
No 234
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.75 E-value=9.1e-17 Score=152.91 Aligned_cols=369 Identities=12% Similarity=0.058 Sum_probs=231.8
Q ss_pred HHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHHHHHHhhcCC-CccccccChhhHHHHHHHHHHHHHHcCCCCCCc
Q 038818 55 TILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGEMLSSGFNV-VGFNWMSSPAATELENIVMDWLGEMLKLPKSFL 133 (486)
Q Consensus 55 ~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~-~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~ 133 (486)
.|..++.+........ +| +|.-...-.+|..+.+.+...... ....|..+-+..++.+.+++.+++++|.....
T Consensus 18 ~vw~e~~~la~e~~~~--~~--LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~- 92 (420)
T KOG0257|consen 18 YVWTEINRLAAEHKVP--NP--LGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDP- 92 (420)
T ss_pred cHHHHHHHHHHhcCCC--Cc--ccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCC-
Confidence 4555555544433222 22 554434456677777777666533 35567777788899999999999988753210
Q ss_pred cCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecC------CC
Q 038818 134 FSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTT------KS 207 (486)
Q Consensus 134 ~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d------~~ 207 (486)
..++++|.|+.+++..++....+ +++.|++-++.+.+.....++.|. ..+.||.. ..
T Consensus 93 ---~~eVlVT~GA~~ai~~~~~~l~~-----------~GDeVii~eP~fd~Y~~~~~maG~---tpv~v~~~~~~g~~~s 155 (420)
T KOG0257|consen 93 ---DDEVLVTAGANEAISSALLGLLN-----------PGDEVIVFEPFFDCYIPQVVMAGG---TPVFVPLKPKEGNVSS 155 (420)
T ss_pred ---cccEEEecCchHHHHHHHHHHcC-----------CCCEEEEecCcchhhhhHHhhcCC---cceeeccccccccccC
Confidence 13799999999999989888876 788888999999999999999999 88888877 34
Q ss_pred CCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHHHhCceEEeeccccchhccCccchh--h
Q 038818 208 SSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRH--F 282 (486)
Q Consensus 208 ~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~--~ 282 (486)
.+|.+|.+.||.++.+.++ +|+++.++||+|.+-+ |++|++||++||++++.|.+|........++.. .
T Consensus 156 ~~~~~D~~~le~~~t~kTk------~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~as 229 (420)
T KOG0257|consen 156 SDWTLDPEELESKITEKTK------AIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIAS 229 (420)
T ss_pred ccccCChHHHHhhccCCcc------EEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeec
Confidence 5799999999999998765 8999999999999854 899999999999999999999664432221111 0
Q ss_pred hcCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCC---CchHHH
Q 038818 283 IDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRF---RALKLW 358 (486)
Q Consensus 283 ~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~---~~l~~~ 358 (486)
+.|+-..-.=+.|+.|+++ +..-.|..+. ++.+....+...... ...|+..+ .+.+..
T Consensus 230 lPgm~ertitvgS~gKtf~~TGWrlGW~ig-p~~L~~~~~~vh~~~-----------------~~~~~Tp~q~A~a~a~~ 291 (420)
T KOG0257|consen 230 LPGMYERTITVGSFGKTFGVTGWRLGWAIG-PKHLYSALFPVHQNF-----------------VFTCPTPIQEASAAAFA 291 (420)
T ss_pred CCchhheEEEeccccceeeeeeeeeeeeec-hHHhhhhHHHHhhcc-----------------ccccCcHHHHHHHHHHh
Confidence 1333222233456789888 4445777776 544433222211111 11222121 111111
Q ss_pred HHHH--Hhc-hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCc-cchHHHHHHHHHH
Q 038818 359 LVLR--SFG-VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKAN-EGANELNRKLLES 434 (486)
Q Consensus 359 ~~l~--~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~-~~~~~~~~~l~~~ 434 (486)
..+. ..+ .....++.+...++++.|.+.|.++ |+++..+.....+...+.... ..+...+. +..+ .-++...
T Consensus 292 ~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~v~~p~gayyl~adfs~~~-~~~~~~~~~~~~~--d~~~~~w 367 (420)
T KOG0257|consen 292 LELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLKVTGPEGAYYLWADFSLAK-SWPFFEEILEKPD--DFKFVRW 367 (420)
T ss_pred hhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCceEEEEeccccc-cCCcchhhccCCC--ceeeehh
Confidence 1221 111 2345568899999999999999999 899876655444433443111 00000000 0001 1134444
Q ss_pred HH-hcCcEEEeeeeECC-------EeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 435 IN-ASGQLYVSHGMVAG-------IYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 435 l~-~~g~~~~~~~~~~~-------~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
+. +.|.+++.++.+.. ...+|+++. -+++-+++.++.|+
T Consensus 368 l~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~---k~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 368 LIKEGGVVVIPPSAFGSREHIKVAERLVRFCFC---KADETLRKAIERLK 414 (420)
T ss_pred hhccCcEEEeCchhcCCchhhHHHHHHHHHHHH---hhHHHHHHHHHHHh
Confidence 44 34666676665432 335666653 24556777776666
No 235
>PRK06460 hypothetical protein; Provisional
Probab=99.75 E-value=5.5e-16 Score=154.64 Aligned_cols=281 Identities=18% Similarity=0.138 Sum_probs=175.1
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCc----hHHHHHHHHc
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTH----SALQKAAQIA 192 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H----~s~~~a~~~~ 192 (486)
++++.+++++|.+. .+++++|++|+..++.+... +++.|+++...+ ..+...++..
T Consensus 49 ~L~~~lA~l~g~~~---------~v~~~sG~~ai~~~l~al~~-----------~Gd~Vl~~~~~~~~ty~~~~~~~~~~ 108 (376)
T PRK06460 49 ELTKKIVELENAEM---------GVAFSSGMGAISTTALALLK-----------PGNSVLVHRDMFGRSYRFFTDYLKNW 108 (376)
T ss_pred HHHHHHHHHhCCCc---------EEEeCCHHHHHHHHHHHHhC-----------CCCEEEEecCCcCcHHHHHHHHHHhh
Confidence 44456888888753 35567777777666554432 556666665433 3355677888
Q ss_pred CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccch
Q 038818 193 GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGS 272 (486)
Q Consensus 193 G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~ 272 (486)
|+ +++.++.+. .+.+++.+++ .+.+|+++.++|++|.+-|+++|+++|+++|+++++|++|+.+
T Consensus 109 G~---~v~~~~~~~-------~~~l~~~~~~------~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~ 172 (376)
T PRK06460 109 GV---NVDASNPGS-------DNIIEKAKSK------RYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTP 172 (376)
T ss_pred Cc---EEEEECCCC-------HHHHHHhcCC------CceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCcc
Confidence 98 888887542 2334443322 2458889999999999999999999999999999999999754
Q ss_pred hccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCC
Q 038818 273 ACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSR 350 (486)
Q Consensus 273 ~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr 350 (486)
.... .. ..++|.++.+++|+++++.+ .|+++ .+++...+.......+ +-
T Consensus 173 ~~~~----~l---~~~~divv~S~sK~l~G~~~~~~G~~~-~~~~l~~~l~~~~~~~---------------------g~ 223 (376)
T PRK06460 173 INQK----PL---ELGADIVVHSASKFLAGHNDVIAGLAA-GYGKLLNVIDQMRRTL---------------------GT 223 (376)
T ss_pred ccCC----hh---hcCCCEEEeecceeccCCCCceEEEEe-cCHHHHHHHHHHHHhc---------------------CC
Confidence 2211 11 12589999999999875532 55544 4444433221111101 00
Q ss_pred CCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe-cC----------------CCeeEEEEEeecCCC
Q 038818 351 RFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIV-AP----------------RNFAVVCFRVLPSAS 413 (486)
Q Consensus 351 ~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~----------------~~~~~v~f~~~~~~~ 413 (486)
...+..+|.+++ |.+.++.++++..++++++.+.|+++|.++-+ .| ...++++|.+.+.
T Consensus 224 ~~~~~~a~~~l~--~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~-- 299 (376)
T PRK06460 224 SLDPHAAYLTLR--GIKTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGG-- 299 (376)
T ss_pred CCCHHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCc--
Confidence 112334555554 56888999999999999999999999877533 22 1256888888642
Q ss_pred CCCCCCCccchHHHHHHHHHHHH--hc----Cc--EEEe-eee-----E-------CC--EeEEEEEecCCCCcHHHHHH
Q 038818 414 GLGDGKANEGANELNRKLLESIN--AS----GQ--LYVS-HGM-----V-------AG--IYFIRFAVGATLTEDRHVIA 470 (486)
Q Consensus 414 ~~~~~~~~~~~~~~~~~l~~~l~--~~----g~--~~~~-~~~-----~-------~~--~~~lR~~~~~~~tt~~did~ 470 (486)
.+...++.+.+. .. |. ..+. +.. . .| .+.+|+|++- ||.|.
T Consensus 300 -----------~~~~~~~~~~l~~~~~~~s~Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl-----E~~~d 363 (376)
T PRK06460 300 -----------QESALKVMKSLKLIIPAQTLGGVNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVGI-----EDVND 363 (376)
T ss_pred -----------HHHHHHHHHhCCcceeccCCCCCceEEeCccccccccCCHHHHHhcCCCCCeEEEEecc-----CCHHH
Confidence 122334555432 11 11 0111 110 0 01 4679999952 37788
Q ss_pred HHHHHHHHHHHH
Q 038818 471 AWKVVQEKLDGI 482 (486)
Q Consensus 471 ~i~~l~~~~~~l 482 (486)
+++.|.+.++.+
T Consensus 364 l~~dl~~al~~~ 375 (376)
T PRK06460 364 LIEDLDRALSTL 375 (376)
T ss_pred HHHHHHHHHHhh
Confidence 888888877654
No 236
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.75 E-value=2.1e-17 Score=146.07 Aligned_cols=166 Identities=24% Similarity=0.160 Sum_probs=126.5
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH-HHHHHcCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ-KAAQIAGID 195 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~-~a~~~~G~g 195 (486)
+++++++++++.+.. .+++++|||+|+..++.+++. ++..|+++...|++.. ..+...|+
T Consensus 4 ~~~~~l~~~~~~~~~-------~~~~~~~~t~a~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~~~~~~~g~- 64 (170)
T cd01494 4 ELEEKLARLLQPGND-------KAVFVPSGTGANEAALLALLG-----------PGDEVIVDANGHGSRYWVAAELAGA- 64 (170)
T ss_pred HHHHHHHHHcCCCCC-------cEEEeCCcHHHHHHHHHHhCC-----------CCCEEEEeecccceehhhHHHhcCC-
Confidence 567889999964333 688999999999888887653 3556888888998887 88888899
Q ss_pred CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhcc
Q 038818 196 PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACI 275 (486)
Q Consensus 196 ~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~ 275 (486)
+++.++.+..+....+.+.+++.. ....|.+++++.+++++|...|+++|+++|+++|+++|+|++++++...
T Consensus 65 --~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~ 137 (170)
T cd01494 65 --KPVPVPVDDAGYGGLDVAILEELK-----AKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASP 137 (170)
T ss_pred --EEEEeccCCCCccchhhhhhhhcc-----ccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEeccccccccc
Confidence 999999875332223332333321 2345778999999999999999999999999999999999999877654
Q ss_pred CccchhhhcCCCCCCceeeccccccCCCCcceEEEee
Q 038818 276 CPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVK 312 (486)
Q Consensus 276 ~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~ 312 (486)
.+.... ...++|+++.++||++++ .++|++++|
T Consensus 138 ~~~~~~---~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 138 APGVLI---PEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred cccccc---ccccCCEEEEEcccccCC-CceEEEEeC
Confidence 422111 123799999999999998 689999875
No 237
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.75 E-value=1e-15 Score=153.08 Aligned_cols=293 Identities=11% Similarity=0.033 Sum_probs=188.7
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDP 196 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~ 196 (486)
++++.+++.+|++++ +.++|+|+++++..++.+..+ +++.|++...+|+.+...+...|.
T Consensus 71 ~Lr~~ia~~~~~~~~-------~I~it~G~~~~l~~~~~~~~~-----------~gd~vlv~~p~y~~~~~~~~~~g~-- 130 (369)
T PRK08153 71 DLRHALAAHHGVAPE-------NIMVGEGIDGLLGLIVRLYVE-----------PGDPVVTSLGAYPTFNYHVAGFGG-- 130 (369)
T ss_pred HHHHHHHHHhCCCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEECCCcchHHHHHHHHcCC--
Confidence 444556666787665 688999988877655554333 677888899999998888888998
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh--CceEEeeccccchhc
Q 038818 197 KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY--SIWVHVDAAYAGSAC 274 (486)
Q Consensus 197 ~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~--g~~lhvD~a~g~~~~ 274 (486)
+++.+|.+. + .+|++++++.+.... +.+|+++.++||||.+-|.+++.++++.. ++|+++|.+|+.+..
T Consensus 131 -~~~~vp~~~--~-~~~~~~l~~~~~~~~-----~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~ 201 (369)
T PRK08153 131 -RLVTVPYRD--D-REDLDALLDAARREN-----APLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAP 201 (369)
T ss_pred -eEEEeeCCC--C-CCCHHHHHHHhcccC-----CcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcC
Confidence 999999864 2 578888877664321 33677788999999999988888777654 899999999975432
Q ss_pred cCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCC
Q 038818 275 ICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFR 353 (486)
Q Consensus 275 ~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~ 353 (486)
...... +.....--.+..++.|.++.| .-+|+++.. ++... .+....... ...
T Consensus 202 -~~~~~~-~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~-~~~~~-~l~~~~~~~----------------------~~s 255 (369)
T PRK08153 202 -AGAAPP-IDTDDPNVIRMRTFSKAYGLAGARVGYAIGA-PGTIK-AFDKVRNHF----------------------GMN 255 (369)
T ss_pred -cccchh-hhhcCCCEEEEecchHhccCcchheeeeecC-HHHHH-HHHHhhcCC----------------------CCC
Confidence 111111 111111124566789999844 457877764 33332 221110000 012
Q ss_pred chHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHH
Q 038818 354 ALKLWLVLRSFG-VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLL 432 (486)
Q Consensus 354 ~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~ 432 (486)
.+..+++...+. .+.+++..+...++.+++.+.|++. ++.+. ++..+.+.+.+... .....++.
T Consensus 256 ~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~-p~~~~f~~~~~~~~-------------~~~a~~l~ 320 (369)
T PRK08153 256 RIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARAN-GLTPL-PSATNFVAIDCGRD-------------GAFARAVL 320 (369)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCcCcEEEEECCCC-------------cccHHHHH
Confidence 334444444443 3446666777778888888888876 66643 44455544444321 12355778
Q ss_pred HHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 433 ESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 433 ~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
++|.++|+.+..+....+..++|+++. +++++++++++|+++...+.
T Consensus 321 ~~l~~~Gi~v~~p~~~~~~~~iRis~~----~~~~~~~~~~al~~~~~~~~ 367 (369)
T PRK08153 321 DGLIARDIFVRMPGVAPLDRCIRVSCG----PDEELDLFAEALPEALEAAR 367 (369)
T ss_pred HHHHHCCeEEeeCCCCCCCCeEEEecC----CHHHHHHHHHHHHHHHHHhh
Confidence 888888985423433233568999984 57799999999999886554
No 238
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.74 E-value=2.8e-15 Score=151.82 Aligned_cols=299 Identities=14% Similarity=0.091 Sum_probs=177.7
Q ss_pred HHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCC
Q 038818 115 ENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGI 194 (486)
Q Consensus 115 e~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~ 194 (486)
..++.+.+++++|.+ ..+++++||+||..|+.++|.......+....+..+|..+...|-+...+....+-
T Consensus 85 ~~~l~~~l~~~~~~~---------~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~ 155 (401)
T PRK00854 85 LAPLYEELAALTGSH---------KVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTD 155 (401)
T ss_pred HHHHHHHHHhhCCCC---------EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCC
Confidence 334455677777653 47999999999999999998652211111000234555666667654433322110
Q ss_pred C---------CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHHHHHHhCc
Q 038818 195 D---------PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCDIAKRYSI 261 (486)
Q Consensus 195 g---------~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~i~~~~g~ 261 (486)
+ ...+..+| ..|+++|+++|.+. +.+|+++.+.+++|.+.| +++|+++|++||+
T Consensus 156 ~~~~~~~~~~~~~~~~~~-------~~d~~~le~~i~~~------~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi 222 (401)
T PRK00854 156 PDARGGFGPFTPGFRVVP-------FGDAEALEAAITPN------TVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNV 222 (401)
T ss_pred ccccccCCCCCCCeEEeC-------CCCHHHHHHHhCCC------eEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 0 01233343 24889999988643 358999999999999877 9999999999999
Q ss_pred eEEeeccccchhccCcc-chhhhcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcCCcccccCccCCCCCcc
Q 038818 262 WVHVDAAYAGSACICPE-FRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVV 339 (486)
Q Consensus 262 ~lhvD~a~g~~~~~~~~-~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~ 339 (486)
++++|++|.+.. ..+. +.....++ ..|.++++ |++.+.+ .+|+++.+++ ... .+.. ....
T Consensus 223 ~lI~DEv~~g~g-~~g~~~~~~~~g~-~~D~~~~~--K~l~gg~~~ig~v~~~~~-~~~-~l~~----~~~~-------- 284 (401)
T PRK00854 223 TLILDEIQTGLG-RTGKLLAEEHEGI-EADVTLIG--KALSGGFYPVSAVLSNSE-VLG-VLKP----GQHG-------- 284 (401)
T ss_pred EEEEechhhCCC-CCchHhHHhhcCC-CCCEEEec--ccccCCccCeEEEEEcHH-HHh-cccC----CCCC--------
Confidence 999999997532 2211 11111222 45777764 9988663 5777776554 222 2210 0000
Q ss_pred CCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEec--CCCeeEEEEEeecCCCCCCC
Q 038818 340 DYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVA--PRNFAVVCFRVLPSASGLGD 417 (486)
Q Consensus 340 ~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~--~~~~~~v~f~~~~~~~~~~~ 417 (486)
.++ + ...+.+++++..+..-.-.++.++..++++++.+.|+++. ...+. .+...++.+.+.+.
T Consensus 285 ----~t~-~---~~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~g~g~~~~i~~~~~------ 349 (401)
T PRK00854 285 ----STF-G---GNPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSIR-SNIVREVRGRGLMLAVELEPE------ 349 (401)
T ss_pred ----CCC-C---cCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhc-cCceEEEeccceEEEEEEecC------
Confidence 011 1 1333344444433110112356778888999999998763 22211 23345566655432
Q ss_pred CCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 418 GKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 418 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
......+.+.|.++|+.. .+ .+..++|+++ +...+++||+++++.|++++.
T Consensus 350 -------~~~~~~~~~~L~~~GV~v-~~---~~~~~lR~~p-~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 350 -------AGGARQYCEALKERGLLA-KD---THDHTIRLAP-PLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred -------chhHHHHHHHHHHCCeEE-ec---CCCCEEEEeC-CcccCHHHHHHHHHHHHHHhh
Confidence 112346777787888753 32 2346899997 456788899999999998754
No 239
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.74 E-value=2e-15 Score=151.19 Aligned_cols=319 Identities=13% Similarity=0.063 Sum_probs=194.7
Q ss_pred HHHHHHHhhcCCC--ccccccChhhHHHHHHHHHHHHHHcC----CCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHH
Q 038818 89 FLGEMLSSGFNVV--GFNWMSSPAATELENIVMDWLGEMLK----LPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQIL 162 (486)
Q Consensus 89 ~~~~~l~~~~n~~--~~~~~~~~~~~~le~~~~~~l~~l~g----~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~ 162 (486)
.+.+.+...++.+ ...|. .++..++.+.+.+|+.+.+| ++.+ ++++|+|+++++..++.+....
T Consensus 45 ~~~~~~~~~~~~~~~~~~Y~-~~G~~~Lr~aia~~~~~~~~~~~~v~~~-------~I~it~Ga~~al~~~~~~~~~~-- 114 (374)
T PRK02610 45 DLKQKLAWLYQQGIESNRYP-DGGHEALKQAIAEYVNESAAGSSQITPA-------NISVGNGSDELIRSLLIATCLG-- 114 (374)
T ss_pred HHHHHHHHHHhhcccccCCC-CCchHHHHHHHHHHhCccccccCCCCHH-------HEEEcCChHHHHHHHHHHHcCC--
Confidence 3445554444332 12343 24567788888888877653 3333 6889999998886555543321
Q ss_pred HHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcc
Q 038818 163 NEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTA 242 (486)
Q Consensus 163 ~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~ 242 (486)
++..|++...++..+..+++..|+ +++.+|+++ +++.+|+++|++++++.. ...+.+|+++.++||
T Consensus 115 --------g~~~Vlv~~P~y~~~~~~~~~~g~---~~~~~~~~~-~~~~~d~~~l~~~~~~~~--~~~~k~i~l~~P~NP 180 (374)
T PRK02610 115 --------GEGSILVAEPTFSMYGILAQTLGI---PVVRVGRDP-ETFEIDLAAAQSAIEQTQ--NPPVRVVFVVHPNSP 180 (374)
T ss_pred --------CCCeEEEcCCChHHHHHHHHHcCC---EEEEecCCc-ccCCCCHHHHHHHHHhhc--CCCceEEEEeCCCCC
Confidence 223678888999999999999999 999999875 357999999999886421 112457777889999
Q ss_pred ccccCCchHHHHHHH-HhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHH
Q 038818 243 ITTVDPLGPLCDIAK-RYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKA 320 (486)
Q Consensus 243 ~G~idpl~~I~~i~~-~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~ 320 (486)
||.+-+.+++.++.+ .+++|+++|.+|..+... .... .+..... -.+..++.|.++ ...-+|+++. ++......
T Consensus 181 TG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~-~~~~-~~~~~~~-~ivi~SfSK~~g~~GlRiG~~v~-~~~l~~~l 256 (374)
T PRK02610 181 TGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQT-TLVG-ELAQHPN-WVILRTFSKAFRLAAHRVGYAIG-HPELIAVL 256 (374)
T ss_pred CCCCCCHHHHHHHHhccCCcEEEEeccccccCcc-chHH-HHhcCCC-EEEEEecchhccCcccceeeeec-CHHHHHHH
Confidence 999977766666543 148999999999754211 1111 1111111 145677899996 5556888875 44343322
Q ss_pred hcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhch-HHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC
Q 038818 321 LSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGV-ANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR 399 (486)
Q Consensus 321 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 399 (486)
......+ + ...+...++...++. +.+.+.+++..+.++.+.+.|++++++.+. ++
T Consensus 257 ~~~~~~~-----------------~------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-p~ 312 (374)
T PRK02610 257 EKVRLPY-----------------N------LPSFSQLAAQLALEHRQELLAAIPEILQERDRLYQALQELPQLRVW-PS 312 (374)
T ss_pred HHhcCCC-----------------C------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEeC-CC
Confidence 1111000 0 112222333333322 344444555555677788888888787753 44
Q ss_pred CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 400 NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 400 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
..+.+.+++.... ....+.+.+.++|+.+ .+ ..+++|+++.. .++++++++.|++++
T Consensus 313 ~g~f~~~~l~~~~--------------~~~~~~~~l~~~gi~v-~~----~~~~lRls~~~----~~~~~~~l~~l~~~l 369 (374)
T PRK02610 313 AANFLYLRLSQDA--------------ALAALHQALKAQGTLV-RH----TGGGLRITIGT----PEENQRTLERLQAAL 369 (374)
T ss_pred cceEEEEeCCCCC--------------CHHHHHHHHHHCCEEE-Ee----CCCeEEEeCCC----HHHHHHHHHHHHHHH
Confidence 4444444443210 1235666677778744 22 24589999852 357899999999887
Q ss_pred HHH
Q 038818 480 DGI 482 (486)
Q Consensus 480 ~~l 482 (486)
+.+
T Consensus 370 ~~~ 372 (374)
T PRK02610 370 TQL 372 (374)
T ss_pred hhc
Confidence 654
No 240
>PRK03321 putative aminotransferase; Provisional
Probab=99.74 E-value=9e-16 Score=152.67 Aligned_cols=284 Identities=13% Similarity=0.054 Sum_probs=179.6
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDP 196 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~ 196 (486)
++++.+++++|.+++ ..++|+|+++++..++..... +++.|+++...+......++..|.
T Consensus 61 ~lr~~ia~~~~~~~~-------~I~~~~G~~~~l~~~~~~~~~-----------~gd~Vli~~p~y~~~~~~~~~~g~-- 120 (352)
T PRK03321 61 ELRAALAEHLGVPPE-------HVAVGCGSVALCQQLVQATAG-----------PGDEVIFAWRSFEAYPILVQVAGA-- 120 (352)
T ss_pred HHHHHHHHHhCcCHH-------HEEECCCHHHHHHHHHHHhcC-----------CCCEEEeCCCCHHHHHHHHHHcCC--
Confidence 455667777777654 678888877766554443321 566787887777677777888999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHH--hCceEEeeccccchhc
Q 038818 197 KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKR--YSIWVHVDAAYAGSAC 274 (486)
Q Consensus 197 ~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~--~g~~lhvD~a~g~~~~ 274 (486)
+++.+|.++ ++.+|++++++++++. +.+|+++.++|++|.+-|.++|.++|++ +++++++|++|+.+..
T Consensus 121 -~~~~v~~~~--~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~ 191 (352)
T PRK03321 121 -TPVQVPLTP--DHTHDLDAMAAAITDR------TRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVR 191 (352)
T ss_pred -EEEEccCCC--CCCCCHHHHHHhhccC------CCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhcc
Confidence 999999875 3689999999988653 2367778999999999999999999997 5999999999976543
Q ss_pred cCccchhhhcCCC-CCCce-eeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC
Q 038818 275 ICPEFRHFIDGIE-GADSF-SLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR 351 (486)
Q Consensus 275 ~~~~~~~~~~~~~-~aDsi-~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~ 351 (486)
.. .....+..+. .-+.+ +.++.|.++.| ..+|+++.. +............+ .
T Consensus 192 ~~-~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~-~~~~~~~~~~~~~~-----------------------~ 246 (352)
T PRK03321 192 DD-DVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGH-PEVIAALRKVAVPF-----------------------S 246 (352)
T ss_pred Cc-CCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCC-HHHHHHHHHhcCCC-----------------------C
Confidence 11 1111111111 12333 44789998743 357777764 33333221110000 1
Q ss_pred CCchHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHH
Q 038818 352 FRALKLWLVLRSF-GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRK 430 (486)
Q Consensus 352 ~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 430 (486)
...+...++...+ ..+.+.+.+++..+..+++.+.|++. ++.+. ++..+.+.++... + ..+
T Consensus 247 ~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~-~~~g~~i~i~l~~--------------~--~~~ 308 (352)
T PRK03321 247 VNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAA-GWTVP-PSQANFVWLPLGE--------------R--TAD 308 (352)
T ss_pred CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCCCEEEEeCCC--------------C--HHH
Confidence 1233333333333 23444555666666677788888876 66643 3444444444421 1 235
Q ss_pred HHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 431 LLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 431 l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
+.+.+.+.|+.+ .+ + +..++|+++. +.++.++++++|+++..
T Consensus 309 ~~~~l~~~gI~v-~~--~-~~~~iRi~~~----~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 309 FAAAAAEAGVVV-RP--F-AGEGVRVTIG----APEENDAFLRAARAWRA 350 (352)
T ss_pred HHHHHHHCCEEE-Ec--c-CCCcEEEeeC----CHHHHHHHHHHHHHHhc
Confidence 667777778753 33 2 3346999973 56799999999988654
No 241
>PLN02672 methionine S-methyltransferase
Probab=99.74 E-value=1.9e-15 Score=163.90 Aligned_cols=321 Identities=13% Similarity=0.122 Sum_probs=195.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.++...+.+|+++.+|++.+. ....++++|+++++..++.+..+ +++.|+++..+++.+..+++.
T Consensus 733 pdlr~aLa~~la~~~Gv~~d~----~e~IIvt~Gs~elL~lll~aLl~-----------pGD~VLVp~PtY~~Y~~~a~~ 797 (1082)
T PLN02672 733 TDPRPSILQFIKSNYGFPTDS----CTEFVYGDTSLALFNKLVLCCVQ-----------EGGTLCFPAGSNGTYVSAAKF 797 (1082)
T ss_pred hHHHHHHHHHHHHHhCcCCCC----CCEEEEeCCHHHHHHHHHHHHcC-----------CCCEEEEeCCChHHHHHHHHH
Confidence 456788999999999986531 11466666665555444444433 677888899999999999999
Q ss_pred cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCC-cccccc---CCchHHHHHHHHhCceEEeec
Q 038818 192 AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGT-TAITTV---DPLGPLCDIAKRYSIWVHVDA 267 (486)
Q Consensus 192 ~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gt-t~~G~i---dpl~~I~~i~~~~g~~lhvD~ 267 (486)
.|. +++.+|+++++++.+|++.|++++++..+ + .|+++.++ ||||.+ +.+++|+++|++||+++++|.
T Consensus 798 ~Ga---~vv~Vpl~~e~gf~lD~d~Le~al~~~~~----~-~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDE 869 (1082)
T PLN02672 798 LKA---NFRRIPTKSSDGFKLTAKTLASTLETVKK----P-WVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDT 869 (1082)
T ss_pred cCC---EEEEEecccccCCCCCHHHHHHHhccCCC----C-EEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeC
Confidence 999 99999997555689999999999864211 2 57777776 999998 457888889999999999999
Q ss_pred cccchhccCcc-----chhhhcCCCC---C-Cc-eeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCC
Q 038818 268 AYAGSACICPE-----FRHFIDGIEG---A-DS-FSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSK 336 (486)
Q Consensus 268 a~g~~~~~~~~-----~~~~~~~~~~---a-Ds-i~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 336 (486)
+|+...+..+. ....+..... . .. +..++.|.++ +..-+|+++..++.... .+.....+...
T Consensus 870 aYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~-~l~~~~~~s~~------ 942 (1082)
T PLN02672 870 SFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLID-AFHSAPGLSRP------ 942 (1082)
T ss_pred CCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHH-HHHHhhhhcCC------
Confidence 99754432111 1111111111 1 12 3346775555 55578988876654433 22111111000
Q ss_pred CccCCCCccccCCCCCCchHHHHHHHHhc------hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeec
Q 038818 337 QVVDYKDWQITLSRRFRALKLWLVLRSFG------VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLP 410 (486)
Q Consensus 337 ~~~~~~~~~~~~sr~~~~l~~~~~l~~~g------~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~ 410 (486)
. ....+.+...+..+. .+.+.+..+...+..+++.+.|++. ++++. +|..+.+.|.-.+
T Consensus 943 -----------~--~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~v~-~PeGGFfLwl~l~ 1007 (1082)
T PLN02672 943 -----------H--STLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC-GWDVL-EPQGGISMVAKPS 1007 (1082)
T ss_pred -----------C--cHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEe-cCCcEEEEEEEcc
Confidence 0 001122222222121 1345566667788889999999987 78765 5666666554221
Q ss_pred CCC-CCCCCCCc---cchHHHHHHHHHHHHhc-CcEEEeeeeE-CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 411 SAS-GLGDGKAN---EGANELNRKLLESINAS-GQLYVSHGMV-AGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 411 ~~~-~~~~~~~~---~~~~~~~~~l~~~l~~~-g~~~~~~~~~-~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
... ........ .........+.+.|.++ |++ +.++.+ ...+++|+++. ++++++++.++.|++..+-
T Consensus 1008 ~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVa-V~PGs~FG~~g~~RIsfa---~~~e~LeeALerL~kf~~~ 1080 (1082)
T PLN02672 1008 AYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLC-INSSSWTGIPGYCRFSFA---LEDSEFDRALKAIARFKEL 1080 (1082)
T ss_pred ccccccccccccccccccCCCHHHHHHHHHHcCCEE-EecCcccCCCCeEEEEec---CCHHHHHHHHHHHHHHHHh
Confidence 000 00000000 00000124577777765 664 444444 33679999985 3677999999999986653
No 242
>PLN02368 alanine transaminase
Probab=99.74 E-value=1.6e-15 Score=152.53 Aligned_cols=280 Identities=9% Similarity=-0.004 Sum_probs=185.2
Q ss_pred HHHHHHHHHHhhc--CCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHH
Q 038818 86 IAGFLGEMLSSGF--NVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILN 163 (486)
Q Consensus 86 ~~~~~~~~l~~~~--n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~ 163 (486)
++..+.+.+.... +.....|....+..++.+.+.+|+.+..|++.+ ..++++|+|+++++..++.+....
T Consensus 82 p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~-----~~~I~it~Ga~~al~~~~~~l~~~--- 153 (407)
T PLN02368 82 PADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSD-----PELIFLTDGASKGVMQILNAVIRG--- 153 (407)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCC-----hhhEEEcccHHHHHHHHHHHHcCC---
Confidence 4555555554421 222345665556678999999999988886432 127899999999987776665411
Q ss_pred HccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccc
Q 038818 164 EIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAI 243 (486)
Q Consensus 164 ~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~ 243 (486)
+++.|++...++......++..|. +++.+|++++++|.+|+++|++++++...++..+.+++++.++|||
T Consensus 154 -------pGd~Vli~~P~Y~~y~~~~~~~g~---~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPT 223 (407)
T PLN02368 154 -------EKDGVLVPVPQYPLYSATISLLGG---TLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPT 223 (407)
T ss_pred -------CCCEEEEeCCCCccHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCC
Confidence 577788899999999999999999 9999999865568999999999998644333345678888999999
Q ss_pred cccCC---chHHHHHHHHhCceEEeeccccchhccCc-cc---hhhhcCC----C-CCCce-eecccccc-C-CCCcceE
Q 038818 244 TTVDP---LGPLCDIAKRYSIWVHVDAAYAGSACICP-EF---RHFIDGI----E-GADSF-SLNAHKWF-F-TTLDCCC 308 (486)
Q Consensus 244 G~idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~-~~---~~~~~~~----~-~aDsi-~~~~hK~l-~-~p~~~g~ 308 (486)
|.+-+ +++|+++|++||+|+++|.+|+....... .+ ...+..+ + ....| ..++.|.+ + ...-+|+
T Consensus 224 G~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy 303 (407)
T PLN02368 224 GQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGY 303 (407)
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEE
Confidence 99844 67888899999999999999976543211 11 1111111 1 11234 45679997 4 5566888
Q ss_pred EEe--eCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhch------------HHHHHHHH
Q 038818 309 LWV--KNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGV------------ANLRNFLR 374 (486)
Q Consensus 309 ~~~--~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~------------~g~~~~~~ 374 (486)
+++ .++..+....... ... . ....+..+++...+.. +..+++.+
T Consensus 304 ~i~~~~~~~li~~~~~~~--~~~------------------~--~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~ 361 (407)
T PLN02368 304 FEMTNIPPKTVEEIYKVA--SIA------------------L--SPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILE 361 (407)
T ss_pred EEEeCCCHHHHHHHHHHh--ccc------------------C--CCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHH
Confidence 875 3444433222111 000 0 1123344444444421 11234567
Q ss_pred HHHHHHHHHHHHHhCCCCeEEecCCCeeEEEE
Q 038818 375 SHVRMAQLFQELVGGDNRFEIVAPRNFAVVCF 406 (486)
Q Consensus 375 ~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f 406 (486)
...+.++.+.+.|+++|++.+. +|+..++.|
T Consensus 362 ~~~~rr~~~~~~L~~~~g~~~~-~P~Gafy~~ 392 (407)
T PLN02368 362 SLRRRARMMTDGFNSCKNVVCN-FTEGAMYSF 392 (407)
T ss_pred HHHHHHHHHHHHHhCCCCeEeC-CCCeeeEec
Confidence 7788899999999999998875 567666666
No 243
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.73 E-value=1.9e-15 Score=148.93 Aligned_cols=280 Identities=11% Similarity=0.045 Sum_probs=179.7
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCC
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGID 195 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g 195 (486)
.++++.+++.+|.+.. .+++|+|+++++..++. +.. ++.+|+. .+++......++..|+
T Consensus 43 ~~lr~~ia~~~~~~~~-------~I~it~Gs~~~l~~~~~-~~~-----------~~~vv~~-~P~y~~y~~~~~~~G~- 101 (332)
T PRK06425 43 TDIEDQIKIYTQGLKI-------KVLIGPGLTHFIYRLLS-YIN-----------VGNIIIV-EPNFNEYKGYAFTHGI- 101 (332)
T ss_pred HHHHHHHHHHhCCCcc-------eEEECCCHHHHHHHHHH-HhC-----------CCcEEEe-CCChHHHHHHHHHcCC-
Confidence 4556778888898765 68999999988866554 221 4444544 7888899999999999
Q ss_pred CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHHHhCceEEeeccccch
Q 038818 196 PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAKRYSIWVHVDAAYAGS 272 (486)
Q Consensus 196 ~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~~~g~~lhvD~a~g~~ 272 (486)
+++.||++. ..+|.+.+++ . .+.+|+++.++||||.+-+ +++|.++|+++|+|+++|.+|+-+
T Consensus 102 --~v~~vp~~~---~~~~~~~l~~----~-----~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~ 167 (332)
T PRK06425 102 --RISALPFNL---INNNPEILNN----Y-----NFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDF 167 (332)
T ss_pred --eEEEEeCCc---ccCcHHHHhh----c-----CCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhcc
Confidence 999999974 3456655542 1 2346777899999999865 677778889999999999999765
Q ss_pred hccCccchhhhcCCCCC-C-ceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCC
Q 038818 273 ACICPEFRHFIDGIEGA-D-SFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLS 349 (486)
Q Consensus 273 ~~~~~~~~~~~~~~~~a-D-si~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~s 349 (486)
.... ........... . .+..++.|.++ ...-+|+++..+ +..........++ +.
T Consensus 168 ~~~~--~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~-~li~~l~~~~~~~-----------------~~--- 224 (332)
T PRK06425 168 VPNR--AEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDD-YNMKISRKITEPW-----------------SV--- 224 (332)
T ss_pred cccc--chhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCH-HHHHHHHHcCCCC-----------------cc---
Confidence 3211 11111111111 2 34567899999 445678877643 3333222111111 00
Q ss_pred CCCCchHHHHHHHHhchHH-HHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHH
Q 038818 350 RRFRALKLWLVLRSFGVAN-LRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELN 428 (486)
Q Consensus 350 r~~~~l~~~~~l~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~ 428 (486)
.... ...+.....+. +++..+...+..+++.+.|+++ ++++..++..+.+.+++. . .
T Consensus 225 ---~~~~-~~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~g~f~~~~~~-~----------------~ 282 (332)
T PRK06425 225 ---CDPA-IDFIRSIDLDYVAKHSLDIMENERSYLINNLEAM-GFRAAGDPSANFITFMIP-D----------------A 282 (332)
T ss_pred ---CHHH-HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCceEEEEEcC-C----------------H
Confidence 1111 11222222222 3456777778888999999887 788765566666666653 1 2
Q ss_pred HHHHHHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 429 RKLLESINASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 429 ~~l~~~l~~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
.++.+.+.++|+.+..+..+. +.+++|+++. +.++.++++++|+++.
T Consensus 283 ~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 283 HDFYSYLLKNGILVRLLDDYECLGEQYIRIAIR----RRSFNIKLVNALRNFL 331 (332)
T ss_pred HHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC----CHHHHHHHHHHHHHHh
Confidence 356677777887655444432 2469999984 4569999999998764
No 244
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.73 E-value=6e-16 Score=153.64 Aligned_cols=294 Identities=13% Similarity=0.111 Sum_probs=189.1
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH-
Q 038818 109 PAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK- 187 (486)
Q Consensus 109 ~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~- 187 (486)
...+.-...+.+.++.+-|.+ ..+++++|+.|+..++.+... +++.|+++...|.+...
T Consensus 60 R~gnPt~~~Le~~la~le~~~---------~~v~~sSG~aAi~~~l~all~-----------~GD~Vlv~~~~Y~~~~~l 119 (395)
T PRK05967 60 TRGTPTTDALCKAIDALEGSA---------GTILVPSGLAAVTVPFLGFLS-----------PGDHALIVDSVYYPTRHF 119 (395)
T ss_pred CCCChHHHHHHHHHHHHhCCC---------CEEEECcHHHHHHHHHHHhcC-----------CCCEEEEccCCcHHHHHH
Confidence 333444444556677776533 357777788888766655433 67788899888887654
Q ss_pred ---HHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEE
Q 038818 188 ---AAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVH 264 (486)
Q Consensus 188 ---a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lh 264 (486)
.++..|+ ++..++.+ +.+.+++++++.+ .+|+++.++|+++.+.||++|+++|+++|++++
T Consensus 120 ~~~~l~~~Gi---~v~~vd~~-------~~e~l~~al~~~T------klV~lesPsNP~l~v~dl~~I~~la~~~g~~vv 183 (395)
T PRK05967 120 CDTMLKRLGV---EVEYYDPE-------IGAGIAKLMRPNT------KVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVM 183 (395)
T ss_pred HHHHHHhcCe---EEEEeCCC-------CHHHHHHhcCcCc------eEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEE
Confidence 4567788 88887532 4577888887654 489999999999999999999999999999999
Q ss_pred eeccccchhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCC
Q 038818 265 VDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYK 342 (486)
Q Consensus 265 vD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 342 (486)
||++|+.+...-| .. -++|.+..+..|++++... .|++. .++....+... +..
T Consensus 184 VD~t~a~p~~~~p-l~------~GaDivv~S~tKy~~Gh~d~~~G~v~-~~~~~~~~l~~----~~~------------- 238 (395)
T PRK05967 184 MDNTWATPLYFRP-LD------FGVDISIHAATKYPSGHSDILLGTVS-ANEKCWPQLLE----AHG------------- 238 (395)
T ss_pred EECCccCceecCh-hH------cCCCEEEEecccccCCCCCeeEEEEE-cCHHHHHHHHH----HHH-------------
Confidence 9999977543322 12 1899999999999765321 55444 44433222110 000
Q ss_pred CccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeE-EecCC----------------CeeEEE
Q 038818 343 DWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFE-IVAPR----------------NFAVVC 405 (486)
Q Consensus 343 ~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~----------------~~~~v~ 405 (486)
..|-...+..+|..++ |.+-+.-++++..++|..+.+.|+++|.++ |..|. ..++++
T Consensus 239 ----~~G~~~~p~da~l~~r--gl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~s 312 (395)
T PRK05967 239 ----TLGLCAGPDDTYQILR--GLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFS 312 (395)
T ss_pred ----HcCCCCCHHHHHHHHc--CcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEE
Confidence 0111234556676665 678889999999999999999999999874 43331 146889
Q ss_pred EEeecCCCCCCCCCCccchHHHHHHHHHHHHh--cCcE------EEeeeeE---------CCEeEEEEEecCCCCcHHHH
Q 038818 406 FRVLPSASGLGDGKANEGANELNRKLLESINA--SGQL------YVSHGMV---------AGIYFIRFAVGATLTEDRHV 468 (486)
Q Consensus 406 f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~g~~------~~~~~~~---------~~~~~lR~~~~~~~tt~~di 468 (486)
|.+.... ....+...++.+.+.- .+.- .+.+... ...+.+|+|++- ||.
T Consensus 313 f~l~~~~---------~~~~~~~~~f~~~l~l~~~~~slG~~~sLi~~~~~~~~~~~~~~~~~~liRlSvGl-----Ed~ 378 (395)
T PRK05967 313 FVLAAGP---------EKGKAKAHAFLDALEIFGLGYSWGGYESLALHVKLGDRTVAKAPYAGPVIRLQIGL-----EDV 378 (395)
T ss_pred EEEcCCC---------cccHHHHHHHHHhCCcceEccCCCCcceeeeeCCCChhHhhhccCCCCeEEEEecc-----CCH
Confidence 9886320 0002233455554421 1110 1111000 012479999952 267
Q ss_pred HHHHHHHHHHHHHHh
Q 038818 469 IAAWKVVQEKLDGIL 483 (486)
Q Consensus 469 d~~i~~l~~~~~~l~ 483 (486)
|.+++.|.+.++.+.
T Consensus 379 ~dLi~Dl~~Al~~~~ 393 (395)
T PRK05967 379 PDLKADLERGFAAAS 393 (395)
T ss_pred HHHHHHHHHHHHhhh
Confidence 777888877776543
No 245
>PRK07505 hypothetical protein; Provisional
Probab=99.73 E-value=2.9e-15 Score=151.61 Aligned_cols=301 Identities=11% Similarity=0.062 Sum_probs=171.9
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH
Q 038818 111 ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ 190 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 190 (486)
..+...++.+.+++++|. . .+++++|++|+..++..++..... +.++.+|+.....|.|+.....
T Consensus 89 ~~~~~~~l~~~la~~~~~-~---------~~~~~sG~~a~~~ai~~~~~~~~~-----~~~~~vi~~~~~~H~s~~~~~~ 153 (402)
T PRK07505 89 RSQILKDLEEALSELFGA-S---------VLTFTSCSAAHLGILPLLASGHLT-----GGVPPHMVFDKNAHASLNILKG 153 (402)
T ss_pred hhHHHHHHHHHHHHHhCC-C---------EEEECChHHHHHHHHHHHHhcccC-----CCCCCEEEEchhhhHhHHhhhh
Confidence 455667788889999886 2 355567788998888776532111 1134466777789988743222
Q ss_pred --HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeecc
Q 038818 191 --IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAA 268 (486)
Q Consensus 191 --~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a 268 (486)
..+. +++.+|. .|+++|++++++.+ .+++++.+.+++|.+.|+++|.++|++||+++++|++
T Consensus 154 ~~~~~~---~v~~~~~-------~d~~~l~~~~~~~~------~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa 217 (402)
T PRK07505 154 ICADET---EVETIDH-------NDLDALEDICKTNK------TVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDA 217 (402)
T ss_pred hhhcCC---eEEEeCC-------CCHHHHHHHHhcCC------CEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECc
Confidence 2233 6777764 38899998886432 3677778889999999999999999999999999999
Q ss_pred ccchh-c-cCccch-hhhcC-CCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCc
Q 038818 269 YAGSA-C-ICPEFR-HFIDG-IEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDW 344 (486)
Q Consensus 269 ~g~~~-~-~~~~~~-~~~~~-~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 344 (486)
|+.+. . ....+. ..+.. ......++.+..|.++.+ .|++++.++...........+|.+
T Consensus 218 ~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~--Gg~~~~~~~~~~~~~~~~~~~~t~--------------- 280 (402)
T PRK07505 218 HGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS--GGVIMLGDAEQIELILRYAGPLAF--------------- 280 (402)
T ss_pred ccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc--CeEEEeCCHHHHHHHHHhCCCcee---------------
Confidence 84221 1 111111 11111 122334555789988765 366555555443321111222221
Q ss_pred cccCCCC-CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccc
Q 038818 345 QITLSRR-FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEG 423 (486)
Q Consensus 345 ~~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~ 423 (486)
..+.. ....++..++..+..+.+.+..++..++...+.+.+... .....+.+..+....
T Consensus 281 --~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~g~~~~i~~~~~~~------------- 340 (402)
T PRK07505 281 --SQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE-----QSGSFLPIRLIYIGD------------- 340 (402)
T ss_pred --CCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc-----CCCCCCCEEEEEeCC-------------
Confidence 11111 112223333443344444444444444444433332111 111222222222221
Q ss_pred hHHHHHHHHHHHHhcCcEEEeeee---ECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 424 ANELNRKLLESINASGQLYVSHGM---VAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 424 ~~~~~~~l~~~l~~~g~~~~~~~~---~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
.....++.++|.++|+++..... ..+..++|+++. ...+++|++++++.|++++++
T Consensus 341 -~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~-~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 341 -EDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFR-ASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred -HHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecC-ccCCHHHHHHHHHHHHHHHHh
Confidence 12345678888888985432211 113468999984 567888999999999988754
No 246
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.73 E-value=1.4e-15 Score=151.58 Aligned_cols=283 Identities=11% Similarity=0.083 Sum_probs=185.7
Q ss_pred HHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCC
Q 038818 118 VMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPK 197 (486)
Q Consensus 118 ~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~ 197 (486)
+++.+++.+|++++ +.++|+|+++++..++.+... +++.|+++..++..+...++..|+
T Consensus 69 Lr~aia~~~~~~~~-------~I~vt~Gs~e~i~~~~~~l~~-----------~gd~vlv~~P~y~~~~~~~~~~g~--- 127 (366)
T PRK01533 69 LRQTIANKLHVKME-------QVLCGSGLDEVIQIISRAVLK-----------AGDNIVTAGATFPQYRHHAIIEGC--- 127 (366)
T ss_pred HHHHHHHHhCCCcc-------eEEECCCHHHHHHHHHHHhcC-----------CCCEEEEcCCcHHHHHHHHHHcCC---
Confidence 45566777788765 789999999988776665533 567788898999999999999999
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHH---HHhCceEEeeccccchhc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIA---KRYSIWVHVDAAYAGSAC 274 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~---~~~g~~lhvD~a~g~~~~ 274 (486)
+++.||.+ ++.+|+++|++++++.+ .+|+++.++||||.+-+.+++.+++ ++++ ++++|.+|..+..
T Consensus 128 ~v~~v~~~---~~~~d~~~l~~~~~~~~------~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~ 197 (366)
T PRK01533 128 EVKEVALN---NGVYDLDEISSVVDNDT------KIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVT 197 (366)
T ss_pred EEEEeecC---CCCcCHHHHHHHhCcCC------cEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhc
Confidence 99999986 34799999999886533 3677889999999998866665555 4555 6778999964332
Q ss_pred cCccchhhhcCCCCC--CceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC
Q 038818 275 ICPEFRHFIDGIEGA--DSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR 351 (486)
Q Consensus 275 ~~~~~~~~~~~~~~a--Dsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~ 351 (486)
. ......+..+... -.+..++.|.++ ...-+|+++.. +............+ .
T Consensus 198 ~-~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~-~~~~~~l~~~~~~~-----------------------~ 252 (366)
T PRK01533 198 A-KDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGH-EELIEKLNVVRLPF-----------------------N 252 (366)
T ss_pred c-ccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCC-HHHHHHHHHhcCCC-----------------------C
Confidence 1 1111111111111 245667899998 44457776653 33332221111000 1
Q ss_pred CCchHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHH
Q 038818 352 FRALKLWLVLRSFG-VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRK 430 (486)
Q Consensus 352 ~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 430 (486)
...+...++...+. .+..++..+...+..+++.+.++.+ ++++. ++..+.+.+.+. . ...
T Consensus 253 ~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~-g~~~~-~~~~nf~~~~~~-~----------------~~~ 313 (366)
T PRK01533 253 VSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKEN-EIPFY-QSQTNFIFLPVE-N----------------GGE 313 (366)
T ss_pred cCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCccC-CCcCcEEEEeCC-C----------------HHH
Confidence 23344445555443 2445566666677788888888876 67754 556666666552 1 135
Q ss_pred HHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 431 LLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 431 l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
+.+.|.++|+.+- + + ..++|+++. +.++.++++++|+++.+..-+
T Consensus 314 ~~~~l~~~GI~Vr-~--~--~~~iRis~~----~~~~~~~l~~al~~~~~~~~~ 358 (366)
T PRK01533 314 IYEACAHAGFIIR-P--F--PNGVRITVG----TREQNEGVISVLQQHFENKKR 358 (366)
T ss_pred HHHHHHHCCcEEc-c--C--CCceEEeCC----CHHHHHHHHHHHHHHHHhccc
Confidence 6777778898543 3 2 357999985 456999999999988765433
No 247
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.73 E-value=5.1e-15 Score=149.27 Aligned_cols=303 Identities=13% Similarity=0.065 Sum_probs=180.5
Q ss_pred HHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcC
Q 038818 114 LENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAG 193 (486)
Q Consensus 114 le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G 193 (486)
...++.+.|+++++.+ ..+++++|++||..|+.++|.....+.+ . .+..+|......|-+..-+....|
T Consensus 78 ~~~~la~~L~~~~~~~---------~~~f~~SGseA~e~Alk~ar~~~~~~~~-~-~r~~ii~~~~~yHG~~~~~~~~~~ 146 (397)
T TIGR03246 78 PVLRLAKKLVDATFAD---------KVFFCNSGAEANEAALKLARRYALDKHG-A-DKSEIVAFKNSFHGRTLFTVSVGG 146 (397)
T ss_pred HHHHHHHHHHhhCCCC---------EEEEeCCcHHHHHHHHHHHHHHHHhcCC-C-CCCEEEEECCCcCCccHHHHHhcC
Confidence 3445566777776542 4799999999999999999876322111 0 134556666677877655555544
Q ss_pred CC---------CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc----CCchHHHHHHHHhC
Q 038818 194 ID---------PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV----DPLGPLCDIAKRYS 260 (486)
Q Consensus 194 ~g---------~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i----dpl~~I~~i~~~~g 260 (486)
.. ...+..+|. .|+++|+++|.+. +.+|++....++.|.+ +.+++|.++|++||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g 213 (397)
T TIGR03246 147 QPKYSQGFAPLPGGIKHAPY-------NDLAAAKALISDK------TCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHN 213 (397)
T ss_pred CcccccCCCCCCCceEEeCC-------CCHHHHHHHhccC------eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 21 012333332 2889999988642 3467777666666754 44999999999999
Q ss_pred ceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccC
Q 038818 261 IWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVD 340 (486)
Q Consensus 261 ~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 340 (486)
+++++|+++.|+.....-+.....++ ..|.+++ .|.+++.+..|.++.+++ . .+.+... ...
T Consensus 214 ~llI~DEv~tG~Gr~G~~~a~~~~gv-~pDi~t~--~K~lggG~pigav~~~~~-i-~~~~~~~---~~~---------- 275 (397)
T TIGR03246 214 ALLIFDEVQTGVGRTGELYAYMHYGV-TPDILTS--AKALGGGFPIGAMLTTTE-I-AAHLKVG---THG---------- 275 (397)
T ss_pred CEEEEechhhcCCccccchhhhhcCC-CCCEEEe--ehhhhCCcceeEEEEcHH-H-HHhccCC---CcC----------
Confidence 99999999965421111111111133 4677654 788876677888887654 2 2233210 000
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEec--CCCeeEEEEEeecCCCCCCC
Q 038818 341 YKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDN-RFEIVA--PRNFAVVCFRVLPSASGLGD 417 (486)
Q Consensus 341 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~--~~~~~~v~f~~~~~~~~~~~ 417 (486)
.+. ++.+....++.+++..+. -.++.++..++.++|++.|+++. .+.++. .....++.+.+.+..
T Consensus 276 ---~t~-~~~p~~~aaa~a~l~~~~---~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~----- 343 (397)
T TIGR03246 276 ---TTY-GGNPLACAVAGKVLDLVN---TPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAY----- 343 (397)
T ss_pred ---CCC-CCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCch-----
Confidence 011 111112222333444332 24567788888899988887652 122221 122334444443210
Q ss_pred CCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 418 GKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 418 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
......+.+.+.++|++... .+.+++|++. +...+++|||++++.|+++++++
T Consensus 344 -------~~~~~~~~~~l~~~Gv~~~~----~g~~~lR~~p-~~~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 344 -------QGKAKQFVNAAAEEGVIALI----AGPNVVRFAP-SLVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred -------hhHHHHHHHHHHHCCeEEee----cCCCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHh
Confidence 22345778888888986432 2346899987 45778889999999999988764
No 248
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.73 E-value=4.7e-15 Score=149.66 Aligned_cols=297 Identities=14% Similarity=0.098 Sum_probs=174.9
Q ss_pred HHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcC
Q 038818 114 LENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAG 193 (486)
Q Consensus 114 le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G 193 (486)
...++.+.|+++.+.+ ..+++++||+||..|+.++|.......|....+..+|......|-+...+....+
T Consensus 83 ~~~~l~~~l~~~~~~~---------~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~ 153 (396)
T PRK04073 83 QLGPWYEKVAKLTGKD---------MVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSS 153 (396)
T ss_pred HHHHHHHHHHhcCCCC---------eEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcC
Confidence 3444556677776542 4789999999999999999875322111100123455555667766655555544
Q ss_pred CCC---------CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHHHHHHhC
Q 038818 194 IDP---------KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCDIAKRYS 260 (486)
Q Consensus 194 ~g~---------~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~i~~~~g 260 (486)
-.. ..+..+|. -|+++|++++++. +.+|+++.+.+++|.+-| +++|.++|++||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~------~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g 220 (396)
T PRK04073 154 EEEYKRGFGPMLPGIKKIPY-------GDLEALKAAITPN------TAAFLVEPIQGEAGINIPPEGFLKAARELCKEEN 220 (396)
T ss_pred CcccccCCCCCCCCceEeCC-------CCHHHHHHhcccC------eEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 210 01233332 1789999888643 357888888999999865 899999999999
Q ss_pred ceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCCCCCcc
Q 038818 261 IWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVV 339 (486)
Q Consensus 261 ~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~ 339 (486)
+++++|++|.++......+.....++ ..|.+++ .|.++.+ ..+|.++.+++ .. +.+... . ..
T Consensus 221 ~lli~DEv~~g~g~~g~~~~~~~~~~-~pdi~~~--sK~lg~gg~~ig~~~~~~~-i~-~~~~~~---~-~~-------- 283 (396)
T PRK04073 221 VLFIADEIQTGLGRTGKLFACDWDNV-TPDMYIL--GKALGGGVFPISCVAANRD-IL-GVFTPG---S-HG-------- 283 (396)
T ss_pred CEEEEecchhCCCcCcHHHHhhhcCC-CCCEEEe--cccccCCCCcceEEEEcHH-HH-hhhcCC---C-CC--------
Confidence 99999999986422111011011122 4677765 5988866 56888877543 22 222110 0 00
Q ss_pred CCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC--CCeEEecCCCeeEEEEEeecCCCCCCC
Q 038818 340 DYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGD--NRFEIVAPRNFAVVCFRVLPSASGLGD 417 (486)
Q Consensus 340 ~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~v~f~~~~~~~~~~~ 417 (486)
.+. + ...+.+.+++..+..-.-..+.++..++.++|.+.|+++ +.+..+ ++...++.+.+...
T Consensus 284 ----~t~-~---~~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~~L~~l~~~~i~~~-~~~g~~~~~~~~~~------ 348 (396)
T PRK04073 284 ----STF-G---GNPLACAVSIAALEVLEEEKLPERSLELGEYFKEQLKEIDNPMIKEV-RGRGLFIGVELNEP------ 348 (396)
T ss_pred ----CCC-C---CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhcCCcccce-ecceEEEEEEecch------
Confidence 010 1 123333444333311000234566677899999999875 222211 22344455544321
Q ss_pred CCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 418 GKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 418 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
...+.++|.++|+++ .+ .+..++|++. +...+++|||++++.|++++
T Consensus 349 ----------~~~~~~~l~~~Gv~~-~~---~~~~~iRi~p-~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 349 ----------ARPYCEALKEEGLLC-KE---THETVIRFAP-PLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred ----------HHHHHHHHHHCCeEE-ec---CCCCEEEEEC-CcccCHHHHHHHHHHHHHHh
Confidence 245677777788753 32 2345899997 45678889999999998764
No 249
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.73 E-value=1.5e-17 Score=158.49 Aligned_cols=253 Identities=19% Similarity=0.145 Sum_probs=162.6
Q ss_pred cCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEe
Q 038818 98 FNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYG 177 (486)
Q Consensus 98 ~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~ 177 (486)
.|.....|..++...++|+ .+++++|.+. .+|+.+||+||..++.+... +...|++
T Consensus 18 a~~gd~~Yg~D~~~~~l~~----~i~~l~g~e~---------a~f~~sGT~An~~al~~~~~-----------~~~~vi~ 73 (290)
T PF01212_consen 18 ANVGDDAYGEDPTTARLEE----RIAELFGKEA---------ALFVPSGTMANQLALRAHLR-----------PGESVIC 73 (290)
T ss_dssp TTSB-CCTTSSHHHHHHHH----HHHHHHTSSE---------EEEESSHHHHHHHHHHHHHH-----------TTEEEEE
T ss_pred cccCCcccCCChhHHHHHH----HHHHHcCCCE---------EEEeCCCChHHHHHHHHHHh-----------cCCceec
Confidence 3444446877877777765 4778888864 47899999999999988774 6778889
Q ss_pred cCCCchHHHHH---HHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccc-ccc---CCch
Q 038818 178 SDQTHSALQKA---AQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAI-TTV---DPLG 250 (486)
Q Consensus 178 s~~~H~s~~~a---~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~-G~i---dpl~ 250 (486)
...+|..+... ....|. +++.++.+. .|.+|+++|++.+++.......|.+|.++.+++.. |.+ +.|+
T Consensus 74 ~~~aHi~~~E~ga~~~~~G~---~~~~l~~~~--~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ 148 (290)
T PF01212_consen 74 ADTAHIHFDETGAIEELSGA---KLIPLPSDD--DGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELR 148 (290)
T ss_dssp ETTEHHHHSSTTHHHHHTTC---EEEEEBECT--GTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHH
T ss_pred cccceeeeeccchhhHhcCc---EEEECCCcc--cCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHH
Confidence 99999886543 255788 899998763 37999999999999865433356677777766654 555 5678
Q ss_pred HHHHHHHHhCceEEeeccccchhccC--ccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccc
Q 038818 251 PLCDIAKRYSIWVHVDAAYAGSACIC--PEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFL 328 (486)
Q Consensus 251 ~I~~i~~~~g~~lhvD~a~g~~~~~~--~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~ 328 (486)
+|.++|++||+++|+|||.-+..... ...+... ..+|++++++.|.++.|. |.+++-+++.+.+.+.. ..++
T Consensus 149 ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~---~~~D~v~~~~tK~~g~~~--Gavl~~~~~~i~~~~~~-~k~~ 222 (290)
T PF01212_consen 149 AISELAREHGLPLHMDGARLANAAAALGVSLAEIA---AGADSVSFGGTKNGGAPG--GAVLAGNKEFIAKARRQ-RKRL 222 (290)
T ss_dssp HHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHH---TTSSEEEEETTSTT-SSS--EEEEEESHHHHHHHHHH-HHHH
T ss_pred HHHHHHHhCceEEEEehhhHHHhhhcccccHHHHh---hhCCEEEEEEEccccccc--ceEEEechHHHHHHHHH-HHHh
Confidence 88899999999999999964432211 1122222 489999999999999884 44444444433333211 1111
Q ss_pred cCccCCCCCccCCCCccccCCCCCCchHH---HHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeE
Q 038818 329 RNKASDSKQVVDYKDWQITLSRRFRALKL---WLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAV 403 (486)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~sr~~~~l~~---~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~ 403 (486)
.+.- |....+.+ +......+.+.......+..+++++|.+.|+.+ ++.+..++.++.
T Consensus 223 gg~~-----------------~~~G~~~a~~~~~~~~l~~l~~~~~~~~~~~~~A~~La~~l~~~-~~~~~~~~~tn~ 282 (290)
T PF01212_consen 223 GGGM-----------------RQAGVLAAAELYQFAALRALELWLERARHANAMAKRLAAGLEAL-GGVLPRPVETNQ 282 (290)
T ss_dssp THHH-----------------HHTTHHHHHHHHHHHHHCHEECSHHHHHCHHHHHHCHHHCHHEE-CEEEETTSS-HH
T ss_pred ccCe-----------------eecceeeeechhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCcE
Confidence 1100 00011111 111222223333667788899999999999998 566666655443
No 250
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.73 E-value=8.2e-16 Score=152.95 Aligned_cols=229 Identities=20% Similarity=0.143 Sum_probs=152.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ 186 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 186 (486)
..|...++|+. ++++.+ + ..+++++|+.|+..++.+... +++.|+++...|+...
T Consensus 49 ~~p~~~~Le~~----lA~l~~--~--------~~v~~~sG~~Ai~~~l~all~-----------~Gd~Vl~~~~~y~~~~ 103 (366)
T PRK07582 49 SNPTWRALEAA----LGELEG--A--------EALVFPSGMAAITAVLRALLR-----------PGDTVVVPADGYYQVR 103 (366)
T ss_pred CCccHHHHHHH----HHHHcC--C--------CEEEECCHHHHHHHHHHHhcC-----------CCCEEEEeCCCcHhHH
Confidence 34455566655 556552 2 467888888887666654322 5677888877886655
Q ss_pred HHH----HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCce
Q 038818 187 KAA----QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIW 262 (486)
Q Consensus 187 ~a~----~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~ 262 (486)
..+ ...|+ +++.++.++. + + .+.++ +.+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 104 ~~~~~~l~~~G~---~v~~v~~~~~--~----~----~~~~~------t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~ 164 (366)
T PRK07582 104 ALAREYLAPLGV---TVREAPTAGM--A----E----AALAG------ADLVLAETPSNPGLDVCDLAALAAAAHAAGAL 164 (366)
T ss_pred HHHHHHHhcCeE---EEEEECCCCh--H----H----HhccC------ceEEEEECCCCCCCCccCHHHHHHHHHHcCCE
Confidence 443 44688 8888887531 1 1 11122 34688889999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccC
Q 038818 263 VHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVD 340 (486)
Q Consensus 263 lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 340 (486)
++||++|+......+ . . .++|.++.++|||+++|.+ +|+++.+++....+.. ....+..
T Consensus 165 lvVD~t~~~~~~~~p-~----~--~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~-~~~~~~g----------- 225 (366)
T PRK07582 165 LVVDNTTATPLGQRP-L----E--LGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVE-RWRLLAG----------- 225 (366)
T ss_pred EEEECCCCCccccCc-h----h--cCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHH-HHHHHhC-----------
Confidence 999999864322111 1 1 1689999999999988876 4777766655433221 1111110
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEec-C-----C-----------CeeE
Q 038818 341 YKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVA-P-----R-----------NFAV 403 (486)
Q Consensus 341 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~-----~-----------~~~~ 403 (486)
-....+..|..++.+ +.+..++++..+++..+.+.|+++|.++-+. | | ..++
T Consensus 226 ---------~~~~~~~a~l~~r~l--~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~ 294 (366)
T PRK07582 226 ---------AIPGPFEAWLAHRSL--GTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGL 294 (366)
T ss_pred ---------CCCCHHHHHHHHhcc--ccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcce
Confidence 012345566666544 5677888999999999999999999876443 1 2 3568
Q ss_pred EEEEee
Q 038818 404 VCFRVL 409 (486)
Q Consensus 404 v~f~~~ 409 (486)
++|.+.
T Consensus 295 ~s~~~~ 300 (366)
T PRK07582 295 VSFELA 300 (366)
T ss_pred EEEEeC
Confidence 899885
No 251
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.73 E-value=2.8e-15 Score=150.47 Aligned_cols=242 Identities=14% Similarity=0.124 Sum_probs=160.1
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ 186 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 186 (486)
.+|....+|+. ++++.|.. .++.++||+.|+..++.+... +++.|+++...+.+..
T Consensus 59 ~nPtv~~lE~~----la~leg~~---------~av~~~SG~aAi~~al~all~-----------~GD~VI~~~~~Y~~T~ 114 (432)
T PRK06702 59 GNPTLAAFEQK----LAELEGGV---------GAVATASGQAAIMLAVLNICS-----------SGDHLLCSSTVYGGTF 114 (432)
T ss_pred CCcHHHHHHHH----HHHHhCCC---------cEEEECCHHHHHHHHHHHhcC-----------CCCEEEECCCchHHHH
Confidence 36776777765 67776654 468899999999888876532 6778889988886544
Q ss_pred HH----HHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCce
Q 038818 187 KA----AQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIW 262 (486)
Q Consensus 187 ~a----~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~ 262 (486)
.. +..+|+ ++..+.. .+|+++++++|+++++ +|++..++|+++.+-|+++|+++|+++|++
T Consensus 115 ~~~~~~l~~~Gi---~v~~vd~------~~d~~~l~~~I~~~Tk------~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~ 179 (432)
T PRK06702 115 NLFGVSLRKLGI---DVTFFNP------NLTADEIVALANDKTK------LVYAESLGNPAMNVLNFKEFSDAAKELEVP 179 (432)
T ss_pred HHHHHHHHHCCC---EEEEECC------CCCHHHHHHhCCcCCe------EEEEEcCCCccccccCHHHHHHHHHHcCCE
Confidence 43 677888 8888742 5799999999987653 677888999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCc-ceEEEe-eCc-hHHH----HHhcCCcccccCccCCC
Q 038818 263 VHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD-CCCLWV-KNP-NALI----KALSTNPEFLRNKASDS 335 (486)
Q Consensus 263 lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~-~~~-~~~~----~~~~~~~~y~~~~~~~~ 335 (486)
+++|++++...+.-| +. .+||.++.|..||+++.-. .|.+.+ ... .+.. ......+.+........
T Consensus 180 livD~T~~tP~~~~p-l~------~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~ 252 (432)
T PRK06702 180 FIVDNTLATPYLCQA-FE------HGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQN 252 (432)
T ss_pred EEEECCCCchhhCCh-hh------cCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhc
Confidence 999999975433222 11 2899999999999996643 333333 221 1100 00000000000000000
Q ss_pred CCccC-----CCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe
Q 038818 336 KQVVD-----YKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIV 396 (486)
Q Consensus 336 ~~~~~-----~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 396 (486)
.+... ...+....+-...++..|..++ |.+.+..++++..+++..+.+.|+++|.++.+
T Consensus 253 ~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~r--gL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V 316 (432)
T PRK06702 253 FGAAAYIVKARVQLLRDYGNCMSPFNAYISNI--GLETLHLRMERHSENALAVAKWLADHERIEWV 316 (432)
T ss_pred cchhhHHHHHHHHHHHHccCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCcceE
Confidence 00000 0000111222445667777766 45778899999999999999999999987654
No 252
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.73 E-value=1.4e-14 Score=143.20 Aligned_cols=350 Identities=14% Similarity=0.125 Sum_probs=206.2
Q ss_pred CcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHH
Q 038818 75 YYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTL 154 (486)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al 154 (486)
-|.+....+.+ . .+.+.-.+.+-.....|..+|...++|+. +++++|++ .++.+++||.|...+.
T Consensus 39 v~iDLltDsgT-~-aMs~~q~a~~~~GDe~yag~~s~~~lE~~----va~~~G~~---------~av~v~sGT~Al~ll~ 103 (450)
T TIGR02618 39 VYIDLLTDSGT-N-AMSDKQWAGLMMGDEAYAGSRNFYHLERT----VRELYGFK---------YVVPTHQGRGAENLLS 103 (450)
T ss_pred eEEEcccCCCc-H-HHHHHHHHHhhhcchhhcCCCcHHHHHHH----HHHHHCCC---------eEEEcCCHHHHHHHHH
Confidence 56776654433 2 23333112222223468899999999876 56677775 4689999999954432
Q ss_pred HHHHHHHHHHccccCCCCeEEEecCCCchHHHHH-HHHcCCCCCCeEEEecCC--------CCCcccCHHHHHHHHHHHH
Q 038818 155 AAARDQILNEIGRENISRLVVYGSDQTHSALQKA-AQIAGIDPKNFRAIKTTK--------SSSFTLTPESLQAAIDLDI 225 (486)
Q Consensus 155 ~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a-~~~~G~g~~~v~~v~~d~--------~~~~~~d~~~L~~~l~~~~ 225 (486)
..... ++++| +...|++-..+ +...|. .++-++.++ ..+|.||+++|+++|++..
T Consensus 104 ~l~l~-----------pGDeV--psn~~f~Tt~ahIe~~Ga---v~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~ 167 (450)
T TIGR02618 104 QIAIK-----------PGDYV--PGNMYFTTTRYHQEKNGA---TFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVG 167 (450)
T ss_pred HhCCC-----------CcCEE--CCceeHHHHHHHHHhCCe---EEEeeecccccccccCCCCCCCcCHHHHHHHhcccc
Confidence 11111 45555 55788766665 677777 666664441 2358999999999998532
Q ss_pred HCCCccEEEEeecCCccc-ccc---CCchHHHHHHHHhCceEEeeccccc-hhccC----ccch-----hhhcC-CCCCC
Q 038818 226 QAGLIPLFLCATVGTTAI-TTV---DPLGPLCDIAKRYSIWVHVDAAYAG-SACIC----PEFR-----HFIDG-IEGAD 290 (486)
Q Consensus 226 ~~g~~p~~vv~~~gtt~~-G~i---dpl~~I~~i~~~~g~~lhvD~a~g~-~~~~~----~~~~-----~~~~~-~~~aD 290 (486)
. ...+ +|+++...+.. |.. +++++|.++|++||+++|.|||+.. .+++. +.+. ..... .+.+|
T Consensus 168 ~-~~~~-lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD 245 (450)
T TIGR02618 168 A-DKIP-YICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYAD 245 (450)
T ss_pred C-cccC-ceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCc
Confidence 1 1223 45555555554 666 6789999999999999999999865 23332 1111 11111 34799
Q ss_pred ceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHH
Q 038818 291 SFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLR 370 (486)
Q Consensus 291 si~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~ 370 (486)
++++++||-+++|. .|++.+++++...+.......| . +...+ +.-.+|.. .++..++...- -+
T Consensus 246 ~~~~S~~Kd~~~~~-GG~l~~~d~~l~~k~r~~~~~~-e-------G~~ty---Ggla~r~~--~ala~gL~e~~---~~ 308 (450)
T TIGR02618 246 GCTMSGKKDCLVNI-GGFLCMNDDEMFQSAKELVVVF-E-------GMPSY---GGLAGRDM--EAMAIGIREAV---DY 308 (450)
T ss_pred EEEEeeccCCCCCC-ceEEEeCCHHHHHHHHHHhhhc-C-------Ccccc---CchhhhhH--HHHHHHHHHhh---hH
Confidence 99999999999997 5777779887776544332222 0 00011 10011111 12222333211 12
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHH-HhcCcEEEeeeeE-
Q 038818 371 NFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESI-NASGQLYVSHGMV- 448 (486)
Q Consensus 371 ~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~- 448 (486)
...++....+++|.+.|.+. |+.++.++..+.|.+.........+ ..+ --.+.|.-.| .+.|+=.+.-+.+
T Consensus 309 ~y~~~r~~~a~~La~~L~~~-Gvpv~~p~ggh~V~vda~~~lph~~----~~~--~p~~al~~~ly~~~gir~~e~g~~~ 381 (450)
T TIGR02618 309 EYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGHAVFLDARRFLPHIP----QDQ--FPAQSLAASIYVETGVRSMERGIVS 381 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCcccCCCCcceEEEEhHHhCCCCC----hhh--ChHHHHHHHHHHHhCccEEeeccee
Confidence 55677778899999999998 8999877777887775432111000 011 1122333333 3555521111111
Q ss_pred ------------CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 449 ------------AGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 449 ------------~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
..-..+|+.+--..-|.+++|.+.+.|..+.++
T Consensus 382 ~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 382 AGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKH 426 (450)
T ss_pred cccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 113579999844444677999999999988753
No 253
>PRK04311 selenocysteine synthase; Provisional
Probab=99.72 E-value=4.9e-15 Score=150.05 Aligned_cols=290 Identities=14% Similarity=0.133 Sum_probs=172.6
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH------HHHHHH
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA------LQKAAQ 190 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s------~~~a~~ 190 (486)
.+.+.+++++|.+. .+++++|+.|+..++... . ++..|+++...|++ +...++
T Consensus 131 ~~e~~lA~l~Gae~---------a~vv~sgtaAl~l~l~~l-~-----------~GdeVIvs~~e~~~~ggs~~i~~~~~ 189 (464)
T PRK04311 131 ALAALLCALTGAED---------ALVVNNNAAAVLLALNAL-A-----------AGKEVIVSRGELVEIGGAFRIPDVMR 189 (464)
T ss_pred HHHHHHHHHhCCCe---------EEEECCHHHHHHHHHHHh-C-----------CCCEEEEcchhhhhcCcchhhHHHHH
Confidence 57788999999763 577888888887766432 1 56678888776663 344567
Q ss_pred HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcc--cc--ccCCchHHHHHHHHhCceEEee
Q 038818 191 IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTA--IT--TVDPLGPLCDIAKRYSIWVHVD 266 (486)
Q Consensus 191 ~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~--~G--~idpl~~I~~i~~~~g~~lhvD 266 (486)
..|+ +++.|+++. ..++++++++|+++++ +|+.++.+|+ +| ..-|+++|+++|++||+++++|
T Consensus 190 ~~G~---~l~~v~~~~----~t~~~dle~aI~~~Tk------lV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD 256 (464)
T PRK04311 190 QAGA---RLVEVGTTN----RTHLRDYEQAINENTA------LLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYD 256 (464)
T ss_pred HCCc---EEEEECCCC----CCCHHHHHHhcCccCe------EEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEE
Confidence 7888 888887642 5689999999987653 6788888775 45 5679999999999999999999
Q ss_pred ccccchh----c---cCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCcc
Q 038818 267 AAYAGSA----C---ICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVV 339 (486)
Q Consensus 267 ~a~g~~~----~---~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~ 339 (486)
++.|... + ..|.....+. .++|.+++++|||+++|. +|+++.+++ .+.+ +...+ ....
T Consensus 257 ~gsG~l~~~~~~gl~~~p~~~~~l~--~GaDiv~fSg~K~LgGp~-~G~i~g~~~-li~~-l~~~~-~~r~--------- 321 (464)
T PRK04311 257 LGSGSLVDLSQYGLPDEPTVQELLA--AGVDLVTFSGDKLLGGPQ-AGIIVGKKE-LIAR-LKKHP-LKRA--------- 321 (464)
T ss_pred CCCcccccchhccCCCCCchhhHHh--cCCcEEEecCcccccCCc-eEEEEEcHH-HHHH-Hhhch-hHHH---------
Confidence 9654321 0 0111111111 379999999999999984 888887654 3321 21111 0000
Q ss_pred CCCCccccCCCCCCchHHHHHHHHh--------c---hHHHHHHHHHHHHHHHHHHHHHhCCC--C--eEEecC------
Q 038818 340 DYKDWQITLSRRFRALKLWLVLRSF--------G---VANLRNFLRSHVRMAQLFQELVGGDN--R--FEIVAP------ 398 (486)
Q Consensus 340 ~~~~~~~~~sr~~~~l~~~~~l~~~--------g---~~g~~~~~~~~~~~a~~l~~~L~~~~--~--~~~~~~------ 398 (486)
+... .....++..++..+ + ..-+....++..++|+.+.+.|+.++ + +++...
T Consensus 322 ------lr~d-k~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gg 394 (464)
T PRK04311 322 ------LRVD-KLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGG 394 (464)
T ss_pred ------Hhcc-hHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCC
Confidence 0000 00111222222211 1 11233445677778889999998764 3 344421
Q ss_pred ---C--CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHH
Q 038818 399 ---R--NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWK 473 (486)
Q Consensus 399 ---~--~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~ 473 (486)
| ..+.++..+.+... ...++.++|.+...-++.. ..++. +.+-+ ....++|++.+++
T Consensus 395 gs~p~~~~~~~~v~~~~~~~-------------~~~~l~~~lr~~~~~i~~r-~~~~~--~~ld~--r~~~~~~~~~~~~ 456 (464)
T PRK04311 395 GSLPVDRLPSAAVTLTPKDR-------------SLEALAARLRLLPPPVIGR-IEDGR--LLLDL--RTLEEEDEERLAA 456 (464)
T ss_pred CCCcCCCCCeEEEEEeCCCC-------------CHHHHHHHHhcCCCCEEEE-EECCE--EEEEe--CcCCHHHHHHHHH
Confidence 1 23455555544311 1234555554323223332 22333 33333 3446779999999
Q ss_pred HHHHHHH
Q 038818 474 VVQEKLD 480 (486)
Q Consensus 474 ~l~~~~~ 480 (486)
.|+++..
T Consensus 457 ~~~~~~~ 463 (464)
T PRK04311 457 ALLEALN 463 (464)
T ss_pred HHHHHhh
Confidence 9988753
No 254
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.72 E-value=1.5e-15 Score=153.79 Aligned_cols=234 Identities=15% Similarity=0.154 Sum_probs=151.5
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH----HHHHHHH
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA----LQKAAQI 191 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~a~~~ 191 (486)
.++.+.++++.|.+ ..+++++|+.|+..++.+... ++..|+++...|.+ +...+..
T Consensus 60 ~~le~~lA~l~g~~---------~~v~~~sG~~Ai~~al~~l~~-----------~Gd~Vl~~~~~y~~t~~~~~~~~~~ 119 (418)
T TIGR01326 60 DVLEQRIAALEGGV---------AALAVASGQAAITYAILNLAQ-----------AGDNIVSSSYLYGGTYNLFKHTLKR 119 (418)
T ss_pred HHHHHHHHHHhCCC---------eEEEEccHHHHHHHHHHHHhC-----------CCCEEEEECCCcHHHHHHHHHHHHH
Confidence 34556688888864 468999999999888776543 55667777776643 3455677
Q ss_pred cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccc
Q 038818 192 AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAG 271 (486)
Q Consensus 192 ~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~ 271 (486)
.|+ +++.++.+ |+++|++++++.+ .+|+++.++|++|.+.|+++|+++|+++|+++++|++|+.
T Consensus 120 ~G~---~v~~v~~~-------d~~~l~~~l~~~t------~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~ 183 (418)
T TIGR01326 120 LGI---EVRFVDPD-------DPEEFEKAIDENT------KAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFAT 183 (418)
T ss_pred cCc---EEEEECCC-------CHHHHHHhcCcCC------eEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCch
Confidence 888 88888742 7899999886543 3788889999999999999999999999999999999976
Q ss_pred hhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcCCcccccCc-cCCCCCccCC--------
Q 038818 272 SACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALSTNPEFLRNK-ASDSKQVVDY-------- 341 (486)
Q Consensus 272 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~~~~y~~~~-~~~~~~~~~~-------- 341 (486)
+....+ .. .++|.++.+++|+++++. ..|.+++........ .... ..+... ..+.......
T Consensus 184 ~~~~~~-l~------~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~-~~~~-~~~~~~~~~q~a~~~~~~~~~~~~~ 254 (418)
T TIGR01326 184 PYLCRP-ID------HGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWA-NGRF-PLFTTPDPSYHGLVFTETFGNPAFI 254 (418)
T ss_pred hhcCCc-hh------cCCeEEEECccccccCCccceEEEEEeccccccc-cccc-ccccCCCCccccchhhhhhchhhHH
Confidence 532221 11 268999999999998653 366666654321100 0000 000000 0000000000
Q ss_pred ---C-CccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe
Q 038818 342 ---K-DWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIV 396 (486)
Q Consensus 342 ---~-~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 396 (486)
. .+....|-...+...|..++ |.+.+..++++..+++..+.+.|.++|++..+
T Consensus 255 ~~~~~~~~~~~G~~~~p~~a~~~~~--~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V 311 (418)
T TIGR01326 255 VKARVQLLRDLGAALSPFNAFLLLQ--GLETLSLRMERHVENALKVAEFLEAHPKVAWV 311 (418)
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHHC--CcccHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 0 00000111223345555444 55777778888888999999999999988654
No 255
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.72 E-value=5.3e-15 Score=150.04 Aligned_cols=325 Identities=13% Similarity=0.049 Sum_probs=193.1
Q ss_pred HHHHHHHHhhcCC-----CccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHH
Q 038818 88 GFLGEMLSSGFNV-----VGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQIL 162 (486)
Q Consensus 88 ~~~~~~l~~~~n~-----~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~ 162 (486)
..+.+.+...+.. ....|...++..++.+.+.+|+.+..|++.+. .+.++|+|+++++.. +.....
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~-----~~I~it~Ga~~al~~-l~~~~~--- 120 (409)
T PRK07590 50 PAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISA-----DEIFISDGAKCDTGN-ILDIFG--- 120 (409)
T ss_pred HHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCCh-----hhEEECCCHHHHHHH-HHHhcC---
Confidence 3344555444432 23456556667889888999988777764321 278899998887654 322211
Q ss_pred HHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCC-----------eEEEecCCCCCcccCHHHHHHHHHHHHHCCCcc
Q 038818 163 NEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKN-----------FRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIP 231 (486)
Q Consensus 163 ~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~-----------v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p 231 (486)
+++.|++...++......++..|. + ++.+|+++++.+..|.+. + .+
T Consensus 121 --------~gd~V~v~~P~Y~~~~~~~~~~g~---~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~------~------~~ 177 (409)
T PRK07590 121 --------PDNTIAVTDPVYPVYVDTNVMAGR---TGEANEDGRYSGIVYLPCTAENNFVPELPE------E------KV 177 (409)
T ss_pred --------CCCEEEEeCCCCcchHHHHHHcCC---cccccccccccceeEeecccccCCcccCcc------c------Cc
Confidence 567788899999999999999998 5 888998753345555321 1 24
Q ss_pred EEEEeecCCccccccCC---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCC-C--ceeeccccccC-CCC
Q 038818 232 LFLCATVGTTAITTVDP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGA-D--SFSLNAHKWFF-TTL 304 (486)
Q Consensus 232 ~~vv~~~gtt~~G~idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~a-D--si~~~~hK~l~-~p~ 304 (486)
.+|+++.++||||.+-+ +++|+++|++||+++++|.+|+.+.... .....+..+... + .+..++.|.++ ...
T Consensus 178 k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~-~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGl 256 (409)
T PRK07590 178 DIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDP-SLPHSIYEIEGARECAIEFRSFSKTAGFTGT 256 (409)
T ss_pred eEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCC-CCCcchhhCCCcccceEEEecCccccCCcCc
Confidence 46777899999999855 6778888999999999999997643211 111112222221 2 33567899997 555
Q ss_pred cceEEEeeCchHHHHHhcC-----CcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh---chHHHHHHHHHH
Q 038818 305 DCCCLWVKNPNALIKALST-----NPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF---GVANLRNFLRSH 376 (486)
Q Consensus 305 ~~g~~~~~~~~~~~~~~~~-----~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~---g~~g~~~~~~~~ 376 (486)
-+|+++..++ .+...... ...+..... ... . ....+...++...+ +.+.++++.+..
T Consensus 257 RiG~~i~~~~-li~~~~~~~~~~~~~~~~~~~~-----------~~~-~--~~s~~~q~a~~~~l~~~~~~~~~~~~~~~ 321 (409)
T PRK07590 257 RCAYTVVPKE-LKGKTSDGEGVSLNSLWNRRQS-----------TKF-N--GVSYIVQRAAEAVYSPEGKAQIKELIDYY 321 (409)
T ss_pred eeEEEEcCHH-HhhhccccchhhhHHHHHHHHh-----------hcc-c--CcCHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 6888776433 22200000 000000000 000 0 01223333333322 345566777778
Q ss_pred HHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHh-cCcEEEeeeeEC--CEeE
Q 038818 377 VRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINA-SGQLYVSHGMVA--GIYF 453 (486)
Q Consensus 377 ~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--~~~~ 453 (486)
.+..+.+.+.|+++ ++++..+.....+.+++.+.. + ..++.+.+.+ .|+++..+..+. +..+
T Consensus 322 ~~~r~~l~~~L~~~-~~~~~~~~g~~f~wi~~~~~~------------~--~~~~~~~l~~~~gv~v~pg~~f~~~~~~~ 386 (409)
T PRK07590 322 MENAKIIREGLESA-GFEVYGGVNAPYIWVKTPDGM------------S--SWDFFDKLLQEANVVGTPGSGFGPSGEGY 386 (409)
T ss_pred HHHHHHHHHHHHhc-CCceecCCcceEEEEECCCCC------------C--HHHHHHHHHHHCCEEEeChhHhCCCCCCE
Confidence 88888999999887 677653334445555554310 1 1345555554 466544443332 3568
Q ss_pred EEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 454 IRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 454 lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
+|+++. .+++++++.++.|.++
T Consensus 387 iRi~~~---~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 387 FRLSAF---GSRENVLEAMERIKKA 408 (409)
T ss_pred EEEEcc---CCHHHHHHHHHHHHhh
Confidence 999963 3577899998888764
No 256
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.72 E-value=1.1e-14 Score=148.73 Aligned_cols=321 Identities=15% Similarity=0.108 Sum_probs=212.1
Q ss_pred ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCC
Q 038818 102 GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQT 181 (486)
Q Consensus 102 ~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~ 181 (486)
...|....+...+...+.+++....|..... ..+++|+|+.+|+...+.+..+ +++.|++.+.+
T Consensus 125 ~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~-----~~IiiT~G~q~al~l~~~~l~~-----------pGd~v~vE~Pt 188 (459)
T COG1167 125 ALQYGPTAGLPELREAIAAYLLARRGISCEP-----EQIVITSGAQQALDLLLRLLLD-----------PGDTVLVEDPT 188 (459)
T ss_pred hhcCCCCCCcHHHHHHHHHHHHHhcCCccCc-----CeEEEeCCHHHHHHHHHHHhCC-----------CCCEEEEcCCC
Confidence 3455666778889999999999777876442 3799999988887655554433 78899999999
Q ss_pred chHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCc---hHHHHHHHH
Q 038818 182 HSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPL---GPLCDIAKR 258 (486)
Q Consensus 182 H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl---~~I~~i~~~ 258 (486)
|+....+++.+|+ +++.||+|++ .||+++|+++++... +-++.+.....||||..-++ ++|.++|++
T Consensus 189 Y~~~~~~~~~~g~---~~~~vp~d~~---G~~~e~le~~~~~~~----~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~ 258 (459)
T COG1167 189 YPGALQALEALGA---RVIPVPVDED---GIDPEALEEALAQWK----PKAVYVTPTFQNPTGVTMSLERRKALLALAEK 258 (459)
T ss_pred cHHHHHHHHHcCC---cEEecCCCCC---CCCHHHHHHHHhhcC----CcEEEECCCCCCCCCCccCHHHHHHHHHHHHH
Confidence 9999999999999 9999999853 799999999988641 12344455678999998665 689999999
Q ss_pred hCceEEeeccccchhccCccchhhhcCCC--CCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCC
Q 038818 259 YSIWVHVDAAYAGSACICPEFRHFIDGIE--GADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSK 336 (486)
Q Consensus 259 ~g~~lhvD~a~g~~~~~~~~~~~~~~~~~--~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 336 (486)
||+|++-|..|+-.....+.... +..+. +=-....++.|.+.....+|++....+ .... +........
T Consensus 259 ~~~~IIEDD~y~el~~~~~p~~~-l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~-~~~~-~~~~k~~~~------- 328 (459)
T COG1167 259 YDVLIIEDDYYGELRYDGPPPPP-LKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPE-LIEK-LLRLKQAAD------- 328 (459)
T ss_pred cCCeEEeeCcchhhhcCCCCCCC-hHhhCCCCCEEEEeeehhhcccccceeeeeCCHH-HHHH-HHHHHHHhc-------
Confidence 99999999999765543222211 11111 223567778999998889999887654 1111 110000000
Q ss_pred CccCCCCccccCCCCCCchHHHHHHHHhc--hHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEecCCCeeEEEEEeecCCC
Q 038818 337 QVVDYKDWQITLSRRFRALKLWLVLRSFG--VANLRNFLRSHVRMAQLFQELVGGD-NRFEIVAPRNFAVVCFRVLPSAS 413 (486)
Q Consensus 337 ~~~~~~~~~~~~sr~~~~l~~~~~l~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~~~~~~~~~~v~f~~~~~~~ 413 (486)
..+.......+...+. -| .+.+.++.+...+..+.+.+.|++. ++...+..|..+++.+--.+...
T Consensus 329 ----------~~~s~~~Q~~la~~l~-~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~~ 397 (459)
T COG1167 329 ----------LGPSSLSQAALAAFLL-SGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEGI 397 (459)
T ss_pred ----------CCCChHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCCC
Confidence 0000111122222233 33 3445666666667778888888776 32333445555555543333211
Q ss_pred CCCCCCCccchHHHHHHHHHHHHhcCcEEEeee-eEC----CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 414 GLGDGKANEGANELNRKLLESINASGQLYVSHG-MVA----GIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 414 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~----~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
+ ..++.++..++|+.+..+. .+. ..+++|+++.+ .+++++++.+..|.+++++...
T Consensus 398 -----------~--~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~--~~~e~i~~gi~~l~~~~~~~~~ 458 (459)
T COG1167 398 -----------D--ARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSS--PSEEEIEEGIKRLAALLREAAA 458 (459)
T ss_pred -----------C--HHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCC--CCHHHHHHHHHHHHHHHHHHhc
Confidence 1 3467777888888655523 222 24589999964 4577999999999998887653
No 257
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.72 E-value=2.8e-14 Score=144.48 Aligned_cols=306 Identities=12% Similarity=0.095 Sum_probs=178.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHc
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIA 192 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 192 (486)
.....+.+.+++++|.+ ..+++++||+||..|+..++.......+....+..+|......|-+...++...
T Consensus 73 ~~~~~~~~~l~~~~~~~---------~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~ 143 (400)
T PTZ00125 73 DVLGLAEKYITDLFGYD---------KVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSAS 143 (400)
T ss_pred HHHHHHHHHHHhCCCCC---------EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhc
Confidence 34455667777777653 468999999999999999886422211111013456666766777666655544
Q ss_pred CCCCC---------CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHHHHHHh
Q 038818 193 GIDPK---------NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCDIAKRY 259 (486)
Q Consensus 193 G~g~~---------~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~i~~~~ 259 (486)
+-... .+..++ ..|+++|++.++. ..+.+|+++...+++|.+-| +++|.++|++|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~-------~~d~~~le~~l~~-----~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~ 211 (400)
T PTZ00125 144 TDPKCYNNFGPFVPGFELVD-------YNDVEALEKLLQD-----PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKY 211 (400)
T ss_pred CCcchhccCCCCCCCceEeC-------CCCHHHHHHHhCC-----CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHc
Confidence 32100 112222 2389999998861 12457788888899999887 99999999999
Q ss_pred CceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcCCcccccCccCCCCCc
Q 038818 260 SIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALSTNPEFLRNKASDSKQV 338 (486)
Q Consensus 260 g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~ 338 (486)
|+++++|++|.+.......+.....++ ..|.++++ |+++.++ ++|+++.+++ ... .+... ...
T Consensus 212 ~~lli~Dev~~g~g~~G~~~~~~~~~~-~pd~~~~s--K~l~~g~~~ig~v~~~~~-~~~-~~~~~---~~~-------- 275 (400)
T PTZ00125 212 NVLLIVDEIQTGLGRTGKLLAHDHEGV-KPDIVLLG--KALSGGLYPISAVLANDD-VML-VIKPG---EHG-------- 275 (400)
T ss_pred CCEEEEeccccCCCccchhhHHHhcCC-CCCEEEEc--ccccCCCcCcEEEEEcHH-HHh-hccCC---CCC--------
Confidence 999999999965321111111111222 45777764 9998775 7888887654 222 22110 000
Q ss_pred cCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC----CCeEEecCCCeeEEEEEeecCCCC
Q 038818 339 VDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGD----NRFEIVAPRNFAVVCFRVLPSASG 414 (486)
Q Consensus 339 ~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~~~~~~~~ 414 (486)
.++ .+.+.....+..+++.+..+++ .++..++.+++++.|+++ +.+..+ .+...++.+.+....
T Consensus 276 -----~t~-~~~~~~~~aa~~~l~~i~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~~g~~~~v~~~~~~-- 343 (400)
T PTZ00125 276 -----STY-GGNPLACAVAVEALEVLKEEKL---AENAQRLGEVFRDGLKELLKKSPWVKEI-RGKGLLNAIVFDHSD-- 343 (400)
T ss_pred -----CCC-CcCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHhcCCCeEEE-ecccEEEEEEEccCc--
Confidence 000 1111111222233444322333 344455666666666543 322222 233344455554211
Q ss_pred CCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 415 LGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 415 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
......+.+.+.++|+. +.+. +..++|++.+ ...++++|+++++.|.++++++
T Consensus 344 ----------~~~~~~~~~~l~~~Gv~-v~~~---~~~~lRi~~~-~~~~~~~i~~~l~~l~~~l~~~ 396 (400)
T PTZ00125 344 ----------GVNAWDLCLKLKENGLL-AKPT---HDNIIRFAPP-LVITKEQLDQALEIIKKVLKSF 396 (400)
T ss_pred ----------chHHHHHHHHHHHCCeE-Eeec---CCCEEEEECC-ccCCHHHHHHHHHHHHHHHHHH
Confidence 12234667777778874 4332 3468999974 4678889999999999988876
No 258
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.72 E-value=2.6e-15 Score=159.46 Aligned_cols=362 Identities=10% Similarity=0.034 Sum_probs=229.5
Q ss_pred hhHHhhcCCCCCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHH-------HHHHHhhcCCCcccccc
Q 038818 35 PGYLRKRLPESAPYNPEPIETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFL-------GEMLSSGFNVVGFNWMS 107 (486)
Q Consensus 35 p~~~~~~~~~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-------~~~l~~~~n~~~~~~~~ 107 (486)
|..++..-+++||. +.++.++++++++...+|.. ...|.|.-.-....|+++ .+|++++ .+++...++
T Consensus 46 P~~ir~~~~l~lp~-~~sE~e~~~~~~~~a~kN~~---~~~fiG~G~y~~~~P~vi~~~i~~~~~~yTaY-TPYQpEisQ 120 (954)
T PRK12566 46 PPAIRLNRPLDLPA-ALDEQAALARLRGYAEQNQV---WTSLIGMGYHGTVTPTVILRNVLENPGWYTAY-TPYQPEIAQ 120 (954)
T ss_pred CHHHhcCCCCCCCC-CCCHHHHHHHHHHHHhcCCC---ccccccccccCCcCcHHHHHHHHhCchhhhcC-CCCCchhhh
Confidence 66676555667885 58999999999997777654 345766322223344444 2455653 455555567
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH
Q 038818 108 SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK 187 (486)
Q Consensus 108 ~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 187 (486)
|.....+|.+ .++++|.|++.. +..+..++|.+- .|+.+++... +. ++..+++++..|+....
T Consensus 121 G~Lqal~e~Q--tmi~~LtGm~va-------NASl~D~atA~a-EA~~ma~~~~-~~------k~~~~~v~~~~hP~~~~ 183 (954)
T PRK12566 121 GRLEALLNFQ--QMTIDLTGLDLA-------NASLLDEATAAA-EAMALAKRVA-KS------KSNRFFVDEHCHPQTLS 183 (954)
T ss_pred HHHHHHHHHH--HHHHHHhCchhh-------hhhhccchhHHH-HHHHHHHHHh-hc------CCCEEEECCCCCHHHHH
Confidence 7777788877 899999999976 678888888544 3555444321 10 24568899999987554
Q ss_pred HH----HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceE
Q 038818 188 AA----QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWV 263 (486)
Q Consensus 188 a~----~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~l 263 (486)
.. ..+|+ +++. ++|++.++++ .+.|++..++ ..|.+.++++|++++|+.|..+
T Consensus 184 v~~t~~~~~g~---~i~~-------------~~~~~~~~~~------~~~v~vq~P~-~~G~i~d~~~i~~~~h~~gal~ 240 (954)
T PRK12566 184 VLRTRAEGFGF---ELVV-------------DAVDNLAAHA------VFGALLQYPD-THGEIRDLRPLIDQLHGQQALA 240 (954)
T ss_pred HHHHhhhcCCc---EEEE-------------cchhhcCCCC------EEEEEEECCC-CceEEccHHHHHHHHHHcCCEE
Confidence 43 34455 5543 2244433332 3456666665 5799999999999999999986
Q ss_pred EeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-----cceEEEeeCchHHHHHhcCCcccccCccCCCCCc
Q 038818 264 HVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-----DCCCLWVKNPNALIKALSTNPEFLRNKASDSKQV 338 (486)
Q Consensus 264 hvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-----~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~ 338 (486)
+ +++-............ -+||.++.+++ -|+.|. ..|++.++++ ..+..|+.+.+...+..+.
T Consensus 241 ~-~~~d~laL~ll~~Pge-----~GADI~vG~~Q-~fGvp~~~GGP~ag~~a~~~~-----~~R~~PGRivG~s~D~~G~ 308 (954)
T PRK12566 241 C-VAADLLSLLVLTPPGE-----LGADVVLGSTQ-RFGVPMGYGGPHAAYFACRDD-----YKRAMPGRIIGVSRDARGN 308 (954)
T ss_pred E-EEeCHHHHhCCCChhh-----cCCcEEeeCCC-cCCCCCCCCCCCeeeeeehHH-----HHhhCCCCccceeecCCCC
Confidence 5 4444332222211111 28999865554 444443 3777888764 2244577776544333333
Q ss_pred cCCCCcccc----CCCCCCc------------hHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCee
Q 038818 339 VDYKDWQIT----LSRRFRA------------LKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFA 402 (486)
Q Consensus 339 ~~~~~~~~~----~sr~~~~------------l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~ 402 (486)
..+. .++| --||..| +..-+++.++|.+|++++.++...++.+|++.|.+ .|+++..++.+.
T Consensus 309 ~a~~-l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~-~g~~~~~~~fF~ 386 (954)
T PRK12566 309 TALR-MALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEA-KGIKRLNRHFFD 386 (954)
T ss_pred eeee-hhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh-cCCccccCCccc
Confidence 3322 1222 1234322 22233445579999999999999999999999999 599998887788
Q ss_pred EEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 403 VVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 403 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
.+.+++... ..++.++..+.|+-+-. .+ ...+.+++ ...++++||+.+++++.
T Consensus 387 ~~~v~~~~~----------------~~~~~~~a~~~~~n~r~---~~-~~~~~~s~-de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 387 TLTLEVGGA----------------QAAIIESAEAARINLRI---LG-RGRLGVSL-DETCDEATVARLFDIFL 439 (954)
T ss_pred eEEEEccCC----------------HHHHHHHHHHCCCeeEE---eC-CCeEEEEe-CCCCCHHHHHHHHHHhc
Confidence 888877211 23455565666763211 12 23578898 57889999999999984
No 259
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.72 E-value=2e-15 Score=149.85 Aligned_cols=230 Identities=17% Similarity=0.194 Sum_probs=157.8
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCc----
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTH---- 182 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H---- 182 (486)
.+|...++|+. ++++.|.+ ..+.+++|+.|+..++.+... +++.|+++...+
T Consensus 62 ~~P~~~~lE~~----la~leg~~---------~av~~sSG~aAi~~al~all~-----------~GD~Vl~~~~~yg~t~ 117 (384)
T PRK06434 62 GNPTVQAFEEK----YAVLENAE---------HALSFSSGMGAITSAILSLIK-----------KGKRILSISDLYGQTF 117 (384)
T ss_pred CChhHHHHHHH----HHHHhCCC---------cEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEecCccchHH
Confidence 56666777765 67777764 358888889888777765422 566777765422
Q ss_pred hHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCce
Q 038818 183 SALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIW 262 (486)
Q Consensus 183 ~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~ 262 (486)
..+...+...|+ +++.++++..+.+.+|+ . .+.+|++..++|+++.+.|+++|+++|++++
T Consensus 118 ~~~~~~~~~~Gi---~v~fvd~~~~~~~~l~~---------~-----~tklv~~e~~snpt~~v~Di~~I~~la~~~~-- 178 (384)
T PRK06434 118 YFFNKVLKTLGI---HVDYIDTDRLNSLDFDP---------S-----NYDLIYAESITNPTLKVPDIKNVSSFCHEND-- 178 (384)
T ss_pred HHHHHHHHhcCc---EEEEECCCChhheeecC---------C-----CeeEEEEEcCCCCCceeecHHHHHHHHHHcC--
Confidence 223466778899 99999886422222221 1 1347889999999999999999999999998
Q ss_pred EEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccC
Q 038818 263 VHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVD 340 (486)
Q Consensus 263 lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 340 (486)
++||++++......| .. .++|.+++|+||+++++.. .|++.+++++...+.... ..
T Consensus 179 lvVD~t~~s~~~~~p-l~------~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~-----~~---------- 236 (384)
T PRK06434 179 VIVDATFASPYNQNP-LD------LGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVER-----RK---------- 236 (384)
T ss_pred eEEECCCCCcccCCc-hh------cCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHH-----HH----------
Confidence 567999976543222 11 2799999999999998765 666667666543322110 00
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeE-EecCC----------CeeEEEEEee
Q 038818 341 YKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFE-IVAPR----------NFAVVCFRVL 409 (486)
Q Consensus 341 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~----------~~~~v~f~~~ 409 (486)
..+.....+.+|..++ |.+.+..++++..+++..+.+.|+++|.++ |..|. ..++++|.+.
T Consensus 237 ------~~G~~~~~~~A~l~~~--gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~ 308 (384)
T PRK06434 237 ------TLGSNPDPIQAYLALR--GLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELR 308 (384)
T ss_pred ------hcCCCCCHHHHHHHHh--CCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEEC
Confidence 0111224456666655 568889999999999999999999999875 33332 2568888885
No 260
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.71 E-value=2.1e-14 Score=145.08 Aligned_cols=162 Identities=14% Similarity=0.116 Sum_probs=115.6
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCch------HHHHHH
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHS------ALQKAA 189 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~------s~~~a~ 189 (486)
..+.+.+++++|.+. .+++++|+.|+..++... . ++..|+++...|. ++...+
T Consensus 125 ~~le~~lA~l~gae~---------alvv~sg~aAi~l~l~~l-~-----------~GdeVIvs~~e~v~~ggs~~i~~~~ 183 (454)
T TIGR00474 125 SHVEGLLCELTGAED---------ALVVNNNAAAVLLALNTL-A-----------KGKEVIVSRGELVEIGGSFRIPDVM 183 (454)
T ss_pred HHHHHHHHHHhCCCc---------EEEECCHHHHHHHHHHHh-C-----------CcCEEEECCChhhhhcchhhHHHHH
Confidence 457788999999864 366778888887666432 1 5667888876652 345566
Q ss_pred HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcc--cc--ccCCchHHHHHHHHhCceEEe
Q 038818 190 QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTA--IT--TVDPLGPLCDIAKRYSIWVHV 265 (486)
Q Consensus 190 ~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~--~G--~idpl~~I~~i~~~~g~~lhv 265 (486)
+..|+ +++.++.+. ..|+++++++|+++++ +|+.++.+|+ .| .+.|+++|+++|++||++++|
T Consensus 184 ~~~G~---~~~~v~~~~----~~~l~dle~aI~~~T~------lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~viv 250 (454)
T TIGR00474 184 EQSGA---KLVEVGTTN----RTHLKDYEDAITENTA------LLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVME 250 (454)
T ss_pred HHcCC---EEEEeCCCC----CCCHHHHHHhcCcCCE------EEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEE
Confidence 77888 888887642 4689999999977653 6777777776 46 478999999999999999999
Q ss_pred eccccchhc-------cCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCc
Q 038818 266 DAAYAGSAC-------ICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNP 314 (486)
Q Consensus 266 D~a~g~~~~-------~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~ 314 (486)
|++.|...- ..|.....+ -.++|.+++++|||+++|. +|+++.+++
T Consensus 251 D~~sG~l~~~~~~gl~~~p~~~~~~--~~GaDiv~fSg~K~LgGp~-~G~i~g~~~ 303 (454)
T TIGR00474 251 DLGSGSLVDLSRYGLPDEPTVQEVI--AAGVDLVTFSGDKLLGGPQ-AGIIVGKKE 303 (454)
T ss_pred ECCCcccccchhccCCCCcccccHh--HcCCCEEEecCccccCCCe-EEEEEECHH
Confidence 986543200 001111111 1379999999999999985 788887754
No 261
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.71 E-value=3.9e-14 Score=143.32 Aligned_cols=305 Identities=10% Similarity=0.082 Sum_probs=180.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCC-chHHHHHHHH
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQT-HSALQKAAQI 191 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~-H~s~~~a~~~ 191 (486)
....++.+.+++++|.+ ..+++++|++||..|+..+|....+..+.. .++.+|+..... |-+...++..
T Consensus 79 ~~~~~l~~~l~~~~~~~---------~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~-~~~~~i~~~~~~yhg~~~~~~~~ 148 (401)
T TIGR01885 79 DVFGEFAEYVTKLFGYD---------KVLPMNTGAEAVETAIKLARKWGYKVKGIP-ENQAIIVSAKGNFHGRTLGAISM 148 (401)
T ss_pred HHHHHHHHHHHhhcCCC---------EEEEeCccHHHHHHHHHHHHHHhhhhcCCC-CCCCEEEEECCCcCcccHHHHhC
Confidence 34455666777877753 468999999999999999987532221110 124556555555 5455555554
Q ss_pred cCC-------C--CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHHHHHH
Q 038818 192 AGI-------D--PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCDIAKR 258 (486)
Q Consensus 192 ~G~-------g--~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~i~~~ 258 (486)
.|- + ...+..+|. .|+++|+++|++. +....+|++....+++|.+-| +++|.++|++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~---~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~ 218 (401)
T TIGR01885 149 STDPDSRTNFGPYVPGFKKIPY-------NNLEALEEALEDH---GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTK 218 (401)
T ss_pred cCCcccccccCCCCCCceEeCC-------CCHHHHHHHHHhc---CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHH
Confidence 431 1 012333432 2789999988642 223456777777888899877 9999999999
Q ss_pred hCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCCCCC
Q 038818 259 YSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQ 337 (486)
Q Consensus 259 ~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 337 (486)
||+++++|++|.+.......+.....++ ..|.++++ |.+++. ..+|+++.++ +.. +.+.. .+.
T Consensus 219 ~~~lli~DEv~~g~g~~G~~~~~~~~~~-~~di~~~g--K~l~~g~~~ig~v~~~~-~i~-~~~~~--~~~--------- 282 (401)
T TIGR01885 219 HNVLLIADEIQTGLGRTGKLLCVDHENV-KPDIVLLG--KALSGGVYPVSAVLADD-DVM-LTIKP--GEH--------- 282 (401)
T ss_pred cCCEEEEechhhCCCccchhhHHhhcCC-CCCEEEee--ccccCCCCCcEEEEEcH-HHH-hhccC--CCC---------
Confidence 9999999999865321111101111222 46777765 988765 4567777653 332 22211 000
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEec--CCCeeEEEEEeecCCCCC
Q 038818 338 VVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVA--PRNFAVVCFRVLPSASGL 415 (486)
Q Consensus 338 ~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~--~~~~~~v~f~~~~~~~~~ 415 (486)
..+. ++.+.....+..+++.+..+ .+.++..++++++++.|++++ ..++. .....++.+.+..+.
T Consensus 283 -----~~t~-~~~p~~~~aa~a~L~~i~~~---~l~~~~~~~~~~~~~~L~~l~-~~~~~~~~g~g~~~~i~~~~~~--- 349 (401)
T TIGR01885 283 -----GSTY-GGNPLACAVAVAALEVLEEE---KLAENAEKLGEIFRDQLKKLP-KPIITEVRGRGLLNAIVIDESK--- 349 (401)
T ss_pred -----CCCC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhcc-CCceeEEeecCeeEEEEeccCc---
Confidence 0011 11122223334445444332 344677778999999998873 22221 223344444443221
Q ss_pred CCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 416 GDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 416 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
. .....++.+.|.++|+. +.+. +...+|++.+ ...++++|+++++.|++++
T Consensus 350 ------~--~~~~~~l~~~l~~~Gv~-v~~~---~~~~lRi~p~-l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 350 ------T--GRTAWDLCLKLKEKGLL-AKPT---HGNIIRLAPP-LVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred ------c--hhHHHHHHHHHHhCCEE-EEec---CCCEEEEeCC-ccCCHHHHHHHHHHHHHHh
Confidence 0 12345778888888874 3332 3468999984 6788889999999998765
No 262
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.71 E-value=1.7e-14 Score=143.01 Aligned_cols=350 Identities=14% Similarity=0.108 Sum_probs=201.9
Q ss_pred CcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHH
Q 038818 75 YYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTL 154 (486)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al 154 (486)
-|.+....+.. ..+.+...+.+-.....|..+|...+||+. +++++|++ ..+.+++||.|+..+.
T Consensus 46 v~IDLlSDS~T--~aMs~~q~a~~~vGDd~Yagd~s~~~LE~~----vAe~lG~e---------~aV~v~sGTaAl~ll~ 110 (460)
T PRK13237 46 VYIDLLTDSGT--NAMSDRQWAGMMIGDEAYAGSRNFYHLEET----VQEYYGFK---------HVVPTHQGRGAENLLS 110 (460)
T ss_pred EEEECcccCCc--hhccHHHHHHHhhcchhhcCCCcHHHHHHH----HHHHHCCC---------eEEEeCCHHHHHHHHH
Confidence 46666654333 222233222222333568889999999977 56677775 3688999999987643
Q ss_pred HHHHHHHHHHccccCCCCeEEEecCCCchHHHHH-HHHcCCCCCCeEEEecC--------CCCCcccCHHHHHHHHHHHH
Q 038818 155 AAARDQILNEIGRENISRLVVYGSDQTHSALQKA-AQIAGIDPKNFRAIKTT--------KSSSFTLTPESLQAAIDLDI 225 (486)
Q Consensus 155 ~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a-~~~~G~g~~~v~~v~~d--------~~~~~~~d~~~L~~~l~~~~ 225 (486)
..... ++++| +...|++-.++ +...|. ..+-+..+ ...+|.||++.|+++|++..
T Consensus 111 ~l~v~-----------pGd~V--p~n~~f~Tt~ahI~~~Ga---~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 111 RIAIK-----------PGQYV--PGNMYFTTTRYHQELNGG---IFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred HhCCC-----------CcCEE--CCccchHhhHHHHHhCCc---EEEeeecccccccccCCCCCCCcCHHHHHHHhcccc
Confidence 22111 45554 66777776666 566665 44433211 11358999999999998542
Q ss_pred HCCCccEEEEeecCCcccc-c---cCCchHHHHHHHHhCceEEeeccccch-hccC----ccchhh-----hc-CCCCCC
Q 038818 226 QAGLIPLFLCATVGTTAIT-T---VDPLGPLCDIAKRYSIWVHVDAAYAGS-ACIC----PEFRHF-----ID-GIEGAD 290 (486)
Q Consensus 226 ~~g~~p~~vv~~~gtt~~G-~---idpl~~I~~i~~~~g~~lhvD~a~g~~-~~~~----~~~~~~-----~~-~~~~aD 290 (486)
. ..+.+|.++...+..| . .+++++|.++|++||+++|.|+|+..+ .++. +.+... .+ -...+|
T Consensus 175 ~--~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD 252 (460)
T PRK13237 175 A--ENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYAD 252 (460)
T ss_pred C--CccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCc
Confidence 1 1222455666666664 3 357899999999999999999998654 2222 112111 01 124799
Q ss_pred ceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHH
Q 038818 291 SFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLR 370 (486)
Q Consensus 291 si~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~ 370 (486)
.+++|+||.+.+|. .|++.++++++..+.......|-.. ..++. -.+|...+++ ..+...-. .
T Consensus 253 ~~t~S~~K~~~~~~-GG~i~t~D~eL~~~~r~~~~~~eG~--------~tygg---~~grd~~alA--vgl~E~~~---~ 315 (460)
T PRK13237 253 GCTMSGKKDCLVNI-GGFLAMNDEELFDEAKELVVVYEGM--------PSYGG---MAGRDMEAMA--IGIEESVQ---Y 315 (460)
T ss_pred EEEEeCCCCCCCCC-ceEEEECCHHHHHHHHHhccccCCC--------cCCCC---hhhhHHHHHH--hHHHhhch---H
Confidence 99999999999986 6888889988776544332222111 11110 0123222222 22322111 2
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHH-HhcCcEEEeeeeE-
Q 038818 371 NFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESI-NASGQLYVSHGMV- 448 (486)
Q Consensus 371 ~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~- 448 (486)
+.+++....++||.+.|.+. |+.++.|...+-|.+.........+ ..+. -.+.|...| .+.|+=.+.-+.+
T Consensus 316 ~y~~~ri~~~~~l~~~L~~~-Gvpv~~p~ggH~v~vda~~~lph~~----~~~~--p~~al~~~ly~~~GiR~~e~g~~~ 388 (460)
T PRK13237 316 EYIEHRVGQVRYLGEKLLAA-GVPIVEPVGGHAVFLDARRFLPHLP----QDQF--PAQALAAELYIESGVRSMERGIVS 388 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCceecCCCceEEEEEhHHhCCCCC----cccC--hHHHHHHHHHHHhCcCeEeeccee
Confidence 67788888999999999886 8998876555444332211000000 0110 122333333 3455421111111
Q ss_pred ------------CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 449 ------------AGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 449 ------------~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
..-..+|+.+--..-|.+++|.+.+.|..+.++
T Consensus 389 ~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 389 AGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred cccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence 013579999844444677999999999988753
No 263
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.71 E-value=3.2e-15 Score=137.26 Aligned_cols=315 Identities=16% Similarity=0.124 Sum_probs=214.6
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCC-Cc----h
Q 038818 109 PAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQ-TH----S 183 (486)
Q Consensus 109 ~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~-~H----~ 183 (486)
+....+-..+.+.++.++|...+ +.+++.+.| .|+.-+..+--+. ..+..|++++- .. |
T Consensus 72 ~~W~~lp~~lgdklApLiGA~~~-------Evvv~dtts-~nl~k~L~aalr~--------~~~r~vIv~E~~~fpTdly 135 (407)
T COG3844 72 ADWFDLPERLGDKLAPLIGARAG-------EVVVTDTTS-INLFKVLAAALRP--------QEGRRVIVSEGDNFPTDLY 135 (407)
T ss_pred CchhhchhHHHHHhhhhhcCCCC-------ceEEeCCcc-hHHHHHHHHHhcc--------CCCceEEeecCCCCCcchh
Confidence 34566777889999999999875 566666654 5555444332221 02344555543 33 3
Q ss_pred HHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceE
Q 038818 184 ALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWV 263 (486)
Q Consensus 184 s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~l 263 (486)
.....++++|.|.+ + .+.+.++++++++++++. +|.+++...-||..-++.+|.++++++|+.+
T Consensus 136 ~a~g~~~~~~~~~~-~---------~~~~~P~~~~~~~~dd~A------vV~L~~V~y~TGql~dm~aiT~~AH~~galv 199 (407)
T COG3844 136 IAEGLADLLGIGYD-L---------EGVIAPRALEEAITDDVA------VVLLSHVNYKTGQLLDMRAITALAHQHGALV 199 (407)
T ss_pred hhcchhhhhccccc-c---------eeeeChHHHHHhhccceE------EEEeccccccccceeeHHHHHHHHHhcCceE
Confidence 34556777777421 1 236678899999998864 7889999999999999999999999999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCC-CCccC-
Q 038818 264 HVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDS-KQVVD- 340 (486)
Q Consensus 264 hvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~-~~~~~- 340 (486)
..|=||+++....+-+. .++|+-++++||+++ +|.+.+++++.++.. ......-.+++.....-. ...+.
T Consensus 200 ~wDLAHsaGavp~~Lh~------~gaDfaigcsyKYLNgGPGapa~l~v~~~h~-e~~~~~lsgW~gha~pf~m~~~y~p 272 (407)
T COG3844 200 GWDLAHSAGAVPVDLHA------AGADFAIGCSYKYLNGGPGAPAGLFVAPRHR-ERSWPPLSGWWGHARPFAMEEVYAP 272 (407)
T ss_pred EeehhcccCCcceeecc------cCCCeeeeeeceeccCCCCCceeEEeccccc-cccccccccccCCCCcchhhhccCc
Confidence 99999998887665433 289999999999999 666677788765532 122222223333211000 00000
Q ss_pred -CCCccccCCCCC--CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC-C--CeEEecCC----CeeEEEEEeec
Q 038818 341 -YKDWQITLSRRF--RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGD-N--RFEIVAPR----NFAVVCFRVLP 410 (486)
Q Consensus 341 -~~~~~~~~sr~~--~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-~--~~~~~~~~----~~~~v~f~~~~ 410 (486)
.+-..+.|+... +..++-.+|..+..-++.+..++...+++++.+.++.. + ++++..|. ....|+|..+.
T Consensus 273 ~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp~ 352 (407)
T COG3844 273 GPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHPH 352 (407)
T ss_pred CccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecCc
Confidence 111112222221 22344556666667779999999999999999999764 3 67887653 35678887753
Q ss_pred CCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 411 SASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
..++.+.|.++|++ ..+.....+||.++-.+++-+||=..++.|.++++.+.
T Consensus 353 -----------------~~~V~qaLi~rGVi----gD~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~a 404 (407)
T COG3844 353 -----------------GYQVMQALIDRGVI----GDFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTLA 404 (407)
T ss_pred -----------------HHHHHHHHHHcCcc----ccccCCCeeeecCccceechhHHHHHHHHHHHHHHhhc
Confidence 34677788888974 23455678999999889999999999999999988653
No 264
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.70 E-value=7.5e-15 Score=138.76 Aligned_cols=323 Identities=17% Similarity=0.129 Sum_probs=216.9
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH
Q 038818 108 SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK 187 (486)
Q Consensus 108 ~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 187 (486)
..+...+.+++.+.|.+.-|-+..|. ....++++|+|.||-+.+-+..+ |+..-+++.+.+..++.
T Consensus 120 y~Gl~~frqa~A~Fm~~~r~~~v~fd---P~~~Vv~~G~T~ane~l~fcLad-----------pgdafLvPtPyY~gfdr 185 (471)
T KOG0256|consen 120 YHGLPSFRQAVAEFMERARGNRVKFD---PERVVVTNGATSANETLMFCLAD-----------PGDAFLVPTPYYPGFDR 185 (471)
T ss_pred ccCchHHHHHHHHHHHHHhCCCCccC---ccceEEecccchhhHHHHHHhcC-----------CCceeeecCCCCCcccc
Confidence 34456778888888888777554431 13689999999998655544444 78888899888888887
Q ss_pred HHHH-cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHHHhCceE
Q 038818 188 AAQI-AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAKRYSIWV 263 (486)
Q Consensus 188 a~~~-~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~~~g~~l 263 (486)
-+++ .|+ +++.|.++...++++++++||+++.+..+.|....-|+++.|+||.|.+-+ +..+...|.++++.+
T Consensus 186 dl~~rTgv---eivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHv 262 (471)
T KOG0256|consen 186 DLRWRTGV---EIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHV 262 (471)
T ss_pred cceeccCc---eEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEE
Confidence 6664 578 999999887777999999999999999999988899999999999999855 666777788999999
Q ss_pred EeeccccchhccCccchhhhcC---CC-CCC--ceeeccccccCCCC-cceEEEeeCchHHHHHhcCCcccccCccCCCC
Q 038818 264 HVDAAYAGSACICPEFRHFIDG---IE-GAD--SFSLNAHKWFFTTL-DCCCLWVKNPNALIKALSTNPEFLRNKASDSK 336 (486)
Q Consensus 264 hvD~a~g~~~~~~~~~~~~~~~---~~-~aD--si~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 336 (486)
++|+.|++.+...++++..+.- .+ ..| -|.++..|=++.|. -.|+++..++.....+-....=++.
T Consensus 263 I~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~~v------- 335 (471)
T KOG0256|consen 263 ISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFGLV------- 335 (471)
T ss_pred EeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhccCC-------
Confidence 9999999887655555433221 11 223 35778889888664 5899999888765432222110111
Q ss_pred CccCCCCccccCCCCCCchHHHHHHHHh-----chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecC
Q 038818 337 QVVDYKDWQITLSRRFRALKLWLVLRSF-----GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPS 411 (486)
Q Consensus 337 ~~~~~~~~~~~~sr~~~~l~~~~~l~~~-----g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~ 411 (486)
...-.+...+.+ -.+-+++.-+|....-+++.+.|+++ |+..+ +...+++||.--..
T Consensus 336 ----------------Ss~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl-~s~AGlF~wvDlr~ 397 (471)
T KOG0256|consen 336 ----------------SSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPCL-KSNAGLFCWVDLRK 397 (471)
T ss_pred ----------------cHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCcee-ecCCeeEEEEEhHH
Confidence 111112222222 23345556666667778899999987 78877 44567777743221
Q ss_pred CCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeE---CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 412 ASGLGDGKANEGANELNRKLLESINASGQLYVSHGMV---AGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
-.+ ....+--..|.+++...-.+.++|+.. ...+|+|+|+. .+.++.++-.++.|+..++.
T Consensus 398 lL~-------s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFA--n~~~~t~~~am~Ri~~~~~~ 461 (471)
T KOG0256|consen 398 LLT-------SLTFEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFA--NMSEETLEVAMRRLKQFLDS 461 (471)
T ss_pred hcC-------cCChHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEec--cCCHHHHHHHHHHHHHHHHh
Confidence 110 000111235666666653335565532 34789999995 45665666688888777654
No 265
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.70 E-value=9.2e-15 Score=146.04 Aligned_cols=308 Identities=13% Similarity=0.099 Sum_probs=185.6
Q ss_pred HHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCC-CCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcc
Q 038818 88 GFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLP-KSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIG 166 (486)
Q Consensus 88 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~-~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 166 (486)
..+.+.+....+. ..|....+..++.+.+.+|+.+..|.+ .+ ...+++|+|+++++..++.+..-.
T Consensus 43 ~~~~~~~~~~~~~--~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~-----~~~I~it~G~~~~i~~~~~~l~~~------ 109 (364)
T PRK07865 43 PVIQEALAAAADA--PGYPTTAGTPELREAIVGWLARRRGVTGLD-----PAAVLPVIGSKELVAWLPTLLGLG------ 109 (364)
T ss_pred HHHHHHHHHHHhh--CCCCCccCCHHHHHHHHHHHHHHcCCCCCC-----cccEEEccChHHHHHHHHHHHcCC------
Confidence 3444554443322 245555566788899999999988764 22 127899999998876544433111
Q ss_pred ccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 167 RENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 167 ~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
+++.|+++..+|..+..+++.+|+ +++.++. ++++++ . .+.+|+++.++|+||.+
T Consensus 110 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~---------~~~l~~---~------~~~~v~~~~p~NPtG~~ 164 (364)
T PRK07865 110 ----PGDVVVIPELAYPTYEVGARLAGA---TVVRADS---------LTELGP---Q------RPALIWLNSPSNPTGRV 164 (364)
T ss_pred ----CCCEEEECCCCcccHHHHHHhcCC---EEEecCC---------hhhCCc---c------cceEEEEcCCCCCCCcc
Confidence 567788899999999999999999 7776642 222321 1 24467777899999987
Q ss_pred C---CchHHHHHHHHhCceEEeeccccchhccCccchhhhc----CCC-CCCceeeccccccCCC-CcceEEEeeCchHH
Q 038818 247 D---PLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFID----GIE-GADSFSLNAHKWFFTT-LDCCCLWVKNPNAL 317 (486)
Q Consensus 247 d---pl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~----~~~-~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~ 317 (486)
- .+++|.++|+++|+++++|.+|+....-.+.. ..+. +.. .-..++.++.|.++.| ..+|+++. +++..
T Consensus 165 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~-~~~~~ 242 (364)
T PRK07865 165 LGVDHLRKVVAWARERGAVVASDECYLELGWDAEPV-SILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAG-DPALV 242 (364)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCC-ccccccccCCccceEEEEeechhccCCCceeeEEEec-CHHHH
Confidence 4 47788899999999999999997643211110 1010 000 1126677899998644 45676654 44443
Q ss_pred HHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe
Q 038818 318 IKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFG-VANLRNFLRSHVRMAQLFQELVGGDNRFEIV 396 (486)
Q Consensus 318 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 396 (486)
....... .+... ....+...++.+.+. .+.+++..+...+..+.+.+.|++. ++.+.
T Consensus 243 ~~~~~~~-~~~~~--------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 300 (364)
T PRK07865 243 AELLEVR-KHAGM--------------------MVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAA-GFRVD 300 (364)
T ss_pred HHHHHHH-HhcCC--------------------CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCccc
Confidence 3221110 00000 011222222333332 2445666777778888899999886 77654
Q ss_pred cCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHH
Q 038818 397 APRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKV 474 (486)
Q Consensus 397 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~ 474 (486)
++..+.+.+.-.+. + ...+.+.+.+.|+.+..+..+. +..++|+++.. ++++++++++.
T Consensus 301 -~~~~~~~~~~~~~~-------------~--~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~---~~~~~~~~~~~ 361 (364)
T PRK07865 301 -HSEAGLYLWATRGE-------------D--CWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTA---TDERIAAAVER 361 (364)
T ss_pred -CCCccEEEEEeCCC-------------C--HHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecC---CHHHHHHHHHH
Confidence 34445443322121 1 1245566777888654443332 35689999953 46799999987
Q ss_pred HH
Q 038818 475 VQ 476 (486)
Q Consensus 475 l~ 476 (486)
|+
T Consensus 362 l~ 363 (364)
T PRK07865 362 LA 363 (364)
T ss_pred hh
Confidence 74
No 266
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.70 E-value=5.4e-15 Score=146.39 Aligned_cols=287 Identities=19% Similarity=0.242 Sum_probs=183.9
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ 186 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 186 (486)
..|....+| +.++.|-|.. .++++++|..|+..++.+... +++.|+++...+....
T Consensus 53 gnPt~~~le----~~la~Le~g~---------~a~~~~SGmaAi~~~l~~ll~-----------~Gd~iv~~~~~Y~~t~ 108 (386)
T PF01053_consen 53 GNPTVRALE----QRLAALEGGE---------DALLFSSGMAAISAALLALLK-----------PGDHIVASDDLYGGTY 108 (386)
T ss_dssp C-HHHHHHH----HHHHHHHT-S---------EEEEESSHHHHHHHHHHHHS------------TTBEEEEESSSSHHHH
T ss_pred ccccHHHHH----HHHHHhhccc---------ceeeccchHHHHHHHHHhhcc-----------cCCceEecCCccCcch
Confidence 344444555 4578887753 468889988888666665533 5566777777665544
Q ss_pred HH----HHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhC-c
Q 038818 187 KA----AQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYS-I 261 (486)
Q Consensus 187 ~a----~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g-~ 261 (486)
+. ....|+ ++..++. -|+++|++++++++ .+|.+..++|++..+-||++|+++|+++| +
T Consensus 109 ~~~~~~l~~~gv---~v~~~d~-------~d~~~l~~~l~~~t------~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~ 172 (386)
T PF01053_consen 109 RLLEELLPRFGV---EVTFVDP-------TDLEALEAALRPNT------KLVFLESPSNPTLEVPDLEAIAKLAKEHGDI 172 (386)
T ss_dssp HHHHHCHHHTTS---EEEEEST-------TSHHHHHHHHCTTE------EEEEEESSBTTTTB---HHHHHHHHHHTTT-
T ss_pred hhhhhhhcccCc---EEEEeCc-------hhHHHHHhhccccc------eEEEEEcCCCcccccccHHHHHHHHHHhCCc
Confidence 33 445688 7777753 38999999998854 48999999999999999999999999999 9
Q ss_pred eEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC--cceEEEeeCchHHHHHhcCCcccccCccCCCCCcc
Q 038818 262 WVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL--DCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVV 339 (486)
Q Consensus 262 ~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~--~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~ 339 (486)
+++||.+++.+....| +.. +||.+..|..|++++.- -+|++.+++...+.+.+.....
T Consensus 173 ~~vVDnT~atp~~~~p-L~~------GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~------------- 232 (386)
T PF01053_consen 173 LVVVDNTFATPYNQNP-LEL------GADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRR------------- 232 (386)
T ss_dssp EEEEECTTTHTTTC-G-GGG------T-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHH-------------
T ss_pred eEEeeccccceeeecc-CcC------CceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhh-------------
Confidence 9999999988754433 222 79999999999998553 2677777763222221111100
Q ss_pred CCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeE-EecC----------------CCee
Q 038818 340 DYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFE-IVAP----------------RNFA 402 (486)
Q Consensus 340 ~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~----------------~~~~ 402 (486)
..+-...+..+|..++ |.+.+.-++++..++|..+.+.|+++|.++ |..| ...+
T Consensus 233 -------~~G~~~~p~da~ll~r--gl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~gg 303 (386)
T PF01053_consen 233 -------LLGATLSPFDAWLLLR--GLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGG 303 (386)
T ss_dssp -------HHT-B--HHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTS
T ss_pred -------hcCccchHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCc
Confidence 1111234566777776 668889999999999999999999999886 4433 1246
Q ss_pred EEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHh--cCc-------EEEeeee-----E-------CC--EeEEEEEec
Q 038818 403 VVCFRVLPSASGLGDGKANEGANELNRKLLESINA--SGQ-------LYVSHGM-----V-------AG--IYFIRFAVG 459 (486)
Q Consensus 403 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~g~-------~~~~~~~-----~-------~~--~~~lR~~~~ 459 (486)
+++|.+... .+..+++.+.+.- .+. ++..+.. + .| ...+|+|++
T Consensus 304 l~sf~l~~~-------------~~~~~~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvG 370 (386)
T PF01053_consen 304 LLSFELKGG-------------EEAARRFLDALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVG 370 (386)
T ss_dssp EEEEEESSH-------------HHHHHHHHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--
T ss_pred eeEEEeccc-------------hhhhHhHHhhhhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEec
Confidence 889988753 2344566666521 111 1111111 0 11 358999995
Q ss_pred CCCCcHHHHHHHHHHHHHHHH
Q 038818 460 ATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 460 ~~~tt~~did~~i~~l~~~~~ 480 (486)
- ||++.+++.|+++++
T Consensus 371 l-----Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 371 L-----EDPDDLIADLEQALE 386 (386)
T ss_dssp S-----S-HHHHHHHHHHHHH
T ss_pred c-----CCHHHHHHHHHHhcC
Confidence 2 378888888887653
No 267
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.70 E-value=1.3e-14 Score=146.82 Aligned_cols=328 Identities=13% Similarity=0.067 Sum_probs=197.6
Q ss_pred HHHHHHHHhhcC-CCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceE--EcCCchHHHHHHHHHHHHHHHHH
Q 038818 88 GFLGEMLSSGFN-VVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGV--IQGTTCEAILCTLAAARDQILNE 164 (486)
Q Consensus 88 ~~~~~~l~~~~n-~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~--~t~ggt~a~~~al~~a~~~~~~~ 164 (486)
..+.+.+..... .....|....+..++.+.+.+|+.+..+.+-+ ....+ .|.||+.|...++.+.+.. .
T Consensus 50 ~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~-----~~~v~~~~t~G~~~al~~~~~~l~~~-~-- 121 (404)
T PTZ00376 50 ESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALA-----EKRIATVQALSGTGALRLGFEFLKRF-L-- 121 (404)
T ss_pred hHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccc-----cCeEEEeeccCcchHHHHHHHHHHHh-c--
Confidence 344444433332 22356766667788888888888655432211 01445 4889998876665543221 1
Q ss_pred ccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 165 IGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 165 ~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
.+++.|++.+.++......++.+|+ +++.+|..+++++.+|++.++++++... ....+++.+.++||||
T Consensus 122 -----~~Gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~l~~~~~~~~d~~~l~~~~~~~~---~~~~~~~~~~p~NPTG 190 (404)
T PTZ00376 122 -----PAGTTVYVSNPTWPNHVNIFKSAGL---NVKEYRYYDPKTKGLDFDGMLEDLRTAP---NGSVVLLHACAHNPTG 190 (404)
T ss_pred -----CCCCEEEEcCCCchhHHHHHHHcCC---ceeeccccCcccCCcCHHHHHHHHHhCC---CCCEEEEeCCCCCCCC
Confidence 1678899999999999999999999 9999998433357999999999986431 1135677789999999
Q ss_pred cc---CCchHHHHHHHHhCceEEeeccccchhccCc--cchhhhcCC-CCC-C-ceeeccccccC-CCCcceEEE--eeC
Q 038818 245 TV---DPLGPLCDIAKRYSIWVHVDAAYAGSACICP--EFRHFIDGI-EGA-D-SFSLNAHKWFF-TTLDCCCLW--VKN 313 (486)
Q Consensus 245 ~i---dpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~--~~~~~~~~~-~~a-D-si~~~~hK~l~-~p~~~g~~~--~~~ 313 (486)
.+ +.+++|+++|++||+|+++|.+|..+..... .... +..+ +.. . .+..++.|.++ ...-+|+++ +.+
T Consensus 191 ~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~-~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~ 269 (404)
T PTZ00376 191 VDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYA-IRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCAN 269 (404)
T ss_pred CCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHH-HHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCC
Confidence 98 4577888899999999999999976443110 1111 1111 111 2 44567899999 456788875 445
Q ss_pred chHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhch--------HHHHHHHHHHHHHHHHHHH
Q 038818 314 PNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGV--------ANLRNFLRSHVRMAQLFQE 385 (486)
Q Consensus 314 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~--------~g~~~~~~~~~~~a~~l~~ 385 (486)
++...........+... ...+ ...+...++...+.. +.+++..++..+.++.+.+
T Consensus 270 ~~~~~~l~~~~~~~~~~--------------~~~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~ 332 (404)
T PTZ00376 270 KEEAANVLSQLKLIIRP--------------MYSS---PPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYD 332 (404)
T ss_pred HHHHHHHHHHHHHHHhh--------------hcCC---CchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54322111000000000 0000 122333344433321 1234455667788888999
Q ss_pred HHhCCC---CeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhc-CcEEEeeeeECCEeEEEEEecCC
Q 038818 386 LVGGDN---RFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINAS-GQLYVSHGMVAGIYFIRFAVGAT 461 (486)
Q Consensus 386 ~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~lR~~~~~~ 461 (486)
.|+++. ++... +|..+.+.|--.+ . .+.++|.++ |+ ++.+. + |++++.
T Consensus 333 ~L~~~~~~~~~~~~-~p~gg~f~~~~~~--------------~----~~~~~L~~~~~v-~v~p~---~----Ris~~~- 384 (404)
T PTZ00376 333 ELKALGSPGDWEHI-INQIGMFSFTGLT--------------K----EQVERLIEKYHI-YLLDN---G----RISVAG- 384 (404)
T ss_pred HHHhcCCCCccccc-ccCceEEEecCCC--------------H----HHHHHHHHhCCE-eecCC---C----eEEEec-
Confidence 998762 23333 3454554442111 2 344555555 65 44332 1 999853
Q ss_pred CCcHHHHHHHHHHHHHHHHH
Q 038818 462 LTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 462 ~tt~~did~~i~~l~~~~~~ 481 (486)
.+.++++++++.|+++++.
T Consensus 385 -~~~~~~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 385 -LTSKNVDYVAEAIHDVVRN 403 (404)
T ss_pred -cCHHhHHHHHHHHHHHHhc
Confidence 5777999999999988653
No 268
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.69 E-value=1.5e-14 Score=135.42 Aligned_cols=309 Identities=19% Similarity=0.228 Sum_probs=195.6
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCc----
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTH---- 182 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H---- 182 (486)
..|....+|++ ++.|=|- -.++.+++|..|..+|+..... .++.|+.+..-+
T Consensus 60 ~NPT~~vlE~R----iAaLEGG---------~aa~a~aSG~AA~~~ai~~la~-----------aGD~iVss~~LYGGT~ 115 (426)
T COG2873 60 MNPTTDVLEER----IAALEGG---------VAALAVASGQAAITYAILNLAG-----------AGDNIVSSSKLYGGTY 115 (426)
T ss_pred cCchHHHHHHH----HHHhhcc---------hhhhhhccchHHHHHHHHHhcc-----------CCCeeEeeccccCchH
Confidence 57777788876 4544321 1457788888888888776544 455555443322
Q ss_pred hHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCce
Q 038818 183 SALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIW 262 (486)
Q Consensus 183 ~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~ 262 (486)
.-+....+.+|+ +++.|..+ |++.++++|+++++ +|.+..-.||.+.+-|+++|+++||++|+.
T Consensus 116 ~lf~~tl~~~Gi---~v~fvd~~-------d~~~~~~aI~~nTk------avf~EtigNP~~~v~Die~ia~iAh~~gvp 179 (426)
T COG2873 116 NLFSHTLKRLGI---EVRFVDPD-------DPENFEAAIDENTK------AVFAETIGNPGLDVLDIEAIAEIAHRHGVP 179 (426)
T ss_pred HHHHHHHHhcCc---EEEEeCCC-------CHHHHHHHhCcccc------eEEEEeccCCCccccCHHHHHHHHHHcCCc
Confidence 225566788999 99998643 79999999999986 799999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCch-HHHHHhcCCcccccCccCCCCCccC
Q 038818 263 VHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPN-ALIKALSTNPEFLRNKASDSKQVVD 340 (486)
Q Consensus 263 lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~-~~~~~~~~~~~y~~~~~~~~~~~~~ 340 (486)
++||...+..+++-| ..+ +||.|+-|..||+++.. ..|.+++.... .+.. -...|.| ..+.. +.....
T Consensus 180 liVDNT~atpyl~rP-~~h------GADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~-~~rfP~~-~~p~p-~YhGl~ 249 (426)
T COG2873 180 LIVDNTFATPYLCRP-IEH------GADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTA-NGRFPEF-TTPDP-SYHGLV 249 (426)
T ss_pred EEEecCCCcceecch-hhc------CCCEEEEeecccccCCccccceEEEeCCcccccc-CCCCccc-CCCCc-ccccee
Confidence 999999988755443 332 89999999999999553 35555554221 1110 0111111 11110 111111
Q ss_pred CCC-cc---------cc----CCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC-------
Q 038818 341 YKD-WQ---------IT----LSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR------- 399 (486)
Q Consensus 341 ~~~-~~---------~~----~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~------- 399 (486)
+.+ ++ .+ .+-...+...|..++ |.|-+.-++++..++|..+.+.|+++|.+..++-|
T Consensus 250 ~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lq--GlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~ 327 (426)
T COG2873 250 YTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQ--GLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPY 327 (426)
T ss_pred hhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHh--chhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcc
Confidence 111 00 00 111223344555544 77888899999999999999999999998876421
Q ss_pred -----------CeeEEEEEeecCCCCCCCCCCccchHHHHH--HHHHHHHhcCc---EEEeeee--E----------C--
Q 038818 400 -----------NFAVVCFRVLPSASGLGDGKANEGANELNR--KLLESINASGQ---LYVSHGM--V----------A-- 449 (486)
Q Consensus 400 -----------~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~--~l~~~l~~~g~---~~~~~~~--~----------~-- 449 (486)
...+++|.+.+.. +...++.. +|..++..-|- +++.|.. . .
T Consensus 328 h~la~kyl~~g~g~vltF~~kgg~---------ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv 398 (426)
T COG2873 328 HALAKKYLPKGAGAVLTFGVKGGY---------EAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGV 398 (426)
T ss_pred hhHHHhhccCCCceEEEEEecChH---------HHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCC
Confidence 1457888877531 11111111 22223322222 3444421 1 0
Q ss_pred CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 450 GIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 450 ~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
....+|+|++- ||++.++..|++.++.
T Consensus 399 ~~~~IRlSVGI-----Ed~~DiiaDl~qAl~~ 425 (426)
T COG2873 399 TPDLIRLSVGI-----EDIDDIIADLEQALEA 425 (426)
T ss_pred CCCcEEEEecc-----CCHHHHHHHHHHHHhc
Confidence 25689999952 3788888888886653
No 269
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.69 E-value=3.4e-14 Score=141.51 Aligned_cols=293 Identities=14% Similarity=0.071 Sum_probs=178.5
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCC-CCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCc
Q 038818 104 NWMSSPAATELENIVMDWLGEMLKLP-KSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTH 182 (486)
Q Consensus 104 ~~~~~~~~~~le~~~~~~l~~l~g~~-~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 182 (486)
.|....+..++.+++.+|+.+.+|.+ .+ ..+.++|+|++++...++.+..-. +++.|+++..+|
T Consensus 51 ~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~-----~~~I~it~G~~~~i~~~~~~l~~~----------~gd~Vl~~~p~y 115 (357)
T TIGR03539 51 GYPQTWGTPELREAIVDWLERRRGVPGLD-----PTAVLPVIGTKELVAWLPTLLGLG----------PGDTVVIPELAY 115 (357)
T ss_pred CCCcccCCHHHHHHHHHHHHHhcCCCCCC-----cCeEEEccChHHHHHHHHHHHcCC----------CCCEEEECCCCc
Confidence 45544556788899999999887764 22 127889999998876554433111 677888999999
Q ss_pred hHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHHHh
Q 038818 183 SALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAKRY 259 (486)
Q Consensus 183 ~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~~~ 259 (486)
..+...++.+|+ +++.++ |++.+.. + .+.+|+++.++|++|.+-+ +++|.++|+++
T Consensus 116 ~~~~~~~~~~g~---~~~~v~---------~~~~l~~---~------~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~ 174 (357)
T TIGR03539 116 PTYEVGALLAGA---TPVAAD---------DPTELDP---V------GPDLIWLNSPGNPTGRVLSVDELRAIVAWARER 174 (357)
T ss_pred HHHHHHHHhcCC---EEeccC---------ChhhcCc---c------CccEEEEeCCCCCcCccCCHHHHHHHHHHHHHc
Confidence 999888899888 776653 2222221 1 2346778889999998755 67899999999
Q ss_pred CceEEeeccccchhccCccchhhhcC-----CCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccC
Q 038818 260 SIWVHVDAAYAGSACICPEFRHFIDG-----IEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKAS 333 (486)
Q Consensus 260 g~~lhvD~a~g~~~~~~~~~~~~~~~-----~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~ 333 (486)
|+++++|++|+.+.. .+.....+.. ...-..+..+..|.++.| .-+|.++. +++.......... +.
T Consensus 175 ~~~ii~De~y~~~~~-~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~-~~~~~~~~~~~~~-~~----- 246 (357)
T TIGR03539 175 GAVVASDECYLELGW-EGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAG-DPALVAELLTVRK-HA----- 246 (357)
T ss_pred CeEEEEecchhhhcc-CCCCccceecccCCCccccEEEEeccccccCCCceeEEEEec-CHHHHHHHHHHHh-hc-----
Confidence 999999999965332 1111111110 001125566899998644 34677664 3443332211100 00
Q ss_pred CCCCccCCCCccccCCCCCCchHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCC
Q 038818 334 DSKQVVDYKDWQITLSRRFRALKLWLVLRSFG-VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSA 412 (486)
Q Consensus 334 ~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~ 412 (486)
+.....+...++...+- ...+++..++..+.++++.+.|++. ++.+. +|..+++.+...+..
T Consensus 247 ---------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~-g~~~~-~p~~~~~~~~~~~~~ 309 (357)
T TIGR03539 247 ---------------GLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKA-GFRID-HSEAGLYLWATRGED 309 (357)
T ss_pred ---------------ccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCCCc-CCCccEEEEEECCCC
Confidence 00012222233333332 2445556666777888898999886 67654 455566555443211
Q ss_pred CCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeE--CCEeEEEEEecCCCCcHHHHHHHHHHH
Q 038818 413 SGLGDGKANEGANELNRKLLESINASGQLYVSHGMV--AGIYFIRFAVGATLTEDRHVIAAWKVV 475 (486)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~~~~~lR~~~~~~~tt~~did~~i~~l 475 (486)
...+.+++.+.|+.+..+..+ .+..++|+++.+ +++++++.++.|
T Consensus 310 ---------------~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~~---~~~~i~~~~~~l 356 (357)
T TIGR03539 310 ---------------AWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTA---TDERIAAAVARL 356 (357)
T ss_pred ---------------HHHHHHHHHhCCEEECCccccCCCCCCeEEEEecC---CHHHHHHHHHhh
Confidence 234666777788754433322 235799999954 467898888765
No 270
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.69 E-value=4.2e-14 Score=140.90 Aligned_cols=282 Identities=16% Similarity=0.074 Sum_probs=179.1
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDP 196 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~ 196 (486)
++++.+++.++++++ +.++|+|+++++..++.+..+ +++.|++...++......++..|.
T Consensus 69 ~lr~~ia~~~~~~~~-------~I~it~G~~~al~~~~~~~~~-----------~gd~V~v~~P~y~~~~~~~~~~g~-- 128 (357)
T PRK14809 69 DLTAALADRWDVSPE-------QVWLANGGDGALDYLARAMLD-----------PGDTVLVPDPGFAYYGMSARYHHG-- 128 (357)
T ss_pred HHHHHHHHHhCCCcc-------eEEECCCHHHHHHHHHHHhcC-----------CCCEEEEeCCChHHHHHHHHHcCC--
Confidence 344556666677665 789999999988766655433 667788888888777778888898
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh--CceEEeeccccchhc
Q 038818 197 KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY--SIWVHVDAAYAGSAC 274 (486)
Q Consensus 197 ~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~--g~~lhvD~a~g~~~~ 274 (486)
.++.+|++.++++.+|++++++.+. . +.+|+++.++||||.+-+.+++.++++.. ++++++|++|+.+..
T Consensus 129 -~~~~~~l~~~~~~~~~~~~~~~~~~-~------~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~ 200 (357)
T PRK14809 129 -EVREYPVSKADDFEQTADTVLDAYD-G------ERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAE 200 (357)
T ss_pred -eEEEEecccCcCCCcCHHHHHHhhc-C------CcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccC
Confidence 8999998754457888888776542 1 23677789999999998887777777654 789999999976432
Q ss_pred cCccchhhhcCCCCC-C-ceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC
Q 038818 275 ICPEFRHFIDGIEGA-D-SFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR 351 (486)
Q Consensus 275 ~~~~~~~~~~~~~~a-D-si~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~ 351 (486)
.+..... ++.. . .+..++.|.++ ....+|+++..++ .+........++ .
T Consensus 201 -~~~~~~~---~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~-~~~~~~~~~~~~-----------------------~ 252 (357)
T PRK14809 201 -RPSAVAL---VEERDDVAVLRTFSKAYGLAGLRLGYAVVPEE-WADAYARVNTPF-----------------------A 252 (357)
T ss_pred -CchhHHH---HhhCCCEEEEecchhHhcCcchhheeeecCHH-HHHHHHHhCCCC-----------------------C
Confidence 1111111 1111 2 34557899997 4567888887543 333221111100 1
Q ss_pred CCchHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHH
Q 038818 352 FRALKLWLVLRSFG-VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRK 430 (486)
Q Consensus 352 ~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 430 (486)
...+..++++..+. .+.+++..+...+..+.+.+.|... . + ++..+.+.+++. . ..+
T Consensus 253 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-~---~-~~~g~f~~~~~~-~----------------~~~ 310 (357)
T PRK14809 253 ASELACRAGLAALDDDEHVERTVETARWAREYIREELDAP-T---W-ESAGNFVLAEVG-D----------------ASA 310 (357)
T ss_pred CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCc-c---C-CCCCCEEEEECC-C----------------HHH
Confidence 12333444444443 3445566666666777777777543 1 2 344455555442 1 134
Q ss_pred HHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 431 LLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 431 l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
+.+.+.++|+.+..+..+...+++|+++. +.++++++++.|+++++
T Consensus 311 ~~~~l~~~gv~v~~g~~f~~~~~iRls~~----~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 311 VAEAAQERGVIVRDCTSFGLPECIRITCG----TREETERAVEVLNEVLA 356 (357)
T ss_pred HHHHHHHCCEEEEECccCCCCCeEEEecC----CHHHHHHHHHHHHHHhc
Confidence 56667677875554444433568999974 35699999999988754
No 271
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.69 E-value=1.3e-15 Score=145.39 Aligned_cols=342 Identities=14% Similarity=0.085 Sum_probs=214.3
Q ss_pred CCCCCcceecCCC-CCHHHHHHHHHHhh-cCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchH
Q 038818 71 WQSPYYFAYFPSS-GSIAGFLGEMLSSG-FNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCE 148 (486)
Q Consensus 71 ~~~p~~~~~~~~~-~~~~~~~~~~l~~~-~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~ 148 (486)
..+=+|+||-.+. +-.+.+ .+.+..+ ++......+. +..++.+++.+.+|+++|.++. .+|..| -.
T Consensus 141 lgSYNYLGFa~~~g~ca~~~-~~~~~kygl~~css~~e~--G~~~~hkelE~l~A~f~g~e~a--------~vF~mG-f~ 208 (519)
T KOG1357|consen 141 LGSYNYLGFAQSVGPCAEAS-LKSFDKYGLSRCSSRHEA--GTTEEHKELEELVARFLGVEDA--------IVFSMG-FA 208 (519)
T ss_pred ecccccccccccCCcCChHH-HHHHHHhcccccccchhc--ccHHHHHHHHHHHHHhcCCcce--------EEEecc-cc
Confidence 3555788887543 333333 3333322 2222222222 2456777788899999999874 233322 22
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCC
Q 038818 149 AILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAG 228 (486)
Q Consensus 149 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g 228 (486)
.|-+.+-.... ++..|+-.+..|.|+...|++.|. .++....+ |+.+||+.|++....|
T Consensus 209 TNs~~~p~l~~-----------~gsLIiSDelNHaSi~~GaRLSgA---tiRVfkHN-------dm~~LEr~Lrd~I~~g 267 (519)
T KOG1357|consen 209 TNSMNIPSLLG-----------KGSLIISDELNHASLITGARLSGA---TTRVFRHN-------DMQGLERLLRDAIVYG 267 (519)
T ss_pred ccccCcceeec-----------CCcceeeccccchheeccccccCc---eEEEEecC-------CHHHHHHHHHHHHhcC
Confidence 22111111111 667788888899999999999999 88888754 8999999999987665
Q ss_pred C-------ccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccC-----ccchhhhcCCCCCCceeecc
Q 038818 229 L-------IPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACIC-----PEFRHFIDGIEGADSFSLNA 296 (486)
Q Consensus 229 ~-------~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~-----~~~~~~~~~~~~aDsi~~~~ 296 (486)
. ..++|++..-.++-|.++++.++.+++|+|.++|++|+||..+++.. .++.. .+-+.+|.+...+
T Consensus 268 qP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g--~d~~dvDImMGtf 345 (519)
T KOG1357|consen 268 QPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFG--VDPEDVDIMMGTF 345 (519)
T ss_pred CCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccC--CCchhheeeccee
Confidence 3 23566777778899999999999999999999999999998776522 11110 1124688888888
Q ss_pred ccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh----chHHHHHH
Q 038818 297 HKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF----GVANLRNF 372 (486)
Q Consensus 297 hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~----g~~g~~~~ 372 (486)
.|.+++ +|..+...+.. .+.....+++..-.. ..+ +..+-....+++.+ |.+.-++.
T Consensus 346 tKSfga---~GGyiagsk~l-id~lrt~s~~~~yat--------------~~s-ppvaqq~~ssl~~i~G~dgt~~g~~k 406 (519)
T KOG1357|consen 346 TKSFGA---AGGYIAGSKEL-IDYLRTPSPSALYAT--------------SLS-PPVAQQILTSVKHIMGEDGTNRGRQK 406 (519)
T ss_pred hhhccc---ccceecCcHHH-HhhhccCCCceeecc--------------cCC-hHHHHHHHHHHHhhcCCCcccHHHHH
Confidence 998875 34444333333 233332222221100 001 11122223344442 34567888
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeee---EC
Q 038818 373 LRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGM---VA 449 (486)
Q Consensus 373 ~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~ 449 (486)
+++..+++++++..|++. +|.+.+..+++++..-+.++. ....+.+.|.+.+..++.... .-
T Consensus 407 ~~~l~~ns~yfr~~l~~~-gfivyG~~dSpVvplll~~~~--------------k~~~f~r~~l~~nigvVvvgfPatpl 471 (519)
T KOG1357|consen 407 IERLAENSRYFRWELQKM-GFIVYGNNDSPVVPLLLYGPA--------------KIVAFSREMLERNIGVVVVGFPATPL 471 (519)
T ss_pred HHHHHhhhHHHHHhhhcC-cEEEecCCCCCcceeeecCcc--------------cccHHHHHHHhcCceEEEEeCCCchH
Confidence 999999999999999987 899998888888777666542 122344455555553332211 11
Q ss_pred CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 450 GIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 450 ~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
=....|+|.. -+.+.|++|++++.+.++.+..
T Consensus 472 ~e~r~R~c~S-a~ht~e~ld~~l~~i~~~g~~~ 503 (519)
T KOG1357|consen 472 LESRARFCLS-ASHTKEDLDRALEVIDRVGDED 503 (519)
T ss_pred HHhHHHhhhc-ccccHHHHHHHHHHHhhhchhh
Confidence 1345789885 4566679999999999987543
No 272
>PLN02624 ornithine-delta-aminotransferase
Probab=99.68 E-value=1.3e-13 Score=141.65 Aligned_cols=309 Identities=10% Similarity=0.033 Sum_probs=174.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHc
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIA 192 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 192 (486)
....++.+.|++++|++ ..+++++|++||..|+..+|.+.....+.......+|......|-...-+....
T Consensus 117 ~~~~~la~~L~~~~~~~---------~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~ 187 (474)
T PLN02624 117 DKFPEFAEYLTSMFGYD---------MVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMS 187 (474)
T ss_pred HHHHHHHHHHHhhcCCC---------eEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcC
Confidence 44445666777777653 468899999999999999987532221111011234444444453322233322
Q ss_pred CCC---------CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHHHHHHh
Q 038818 193 GID---------PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCDIAKRY 259 (486)
Q Consensus 193 G~g---------~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~i~~~~ 259 (486)
+-. ...+..+|. -|++.|++.++. .+....+|++....+++|.+-| +++|.++|++|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~---~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~ 257 (474)
T PLN02624 188 CDNEATRGFGPLLPGHLKVDF-------GDLDALEKIFEE---DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKH 257 (474)
T ss_pred CCccccccCCCCCCCceEeCC-------CCHHHHHHHHHh---CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 210 012233332 278999998863 2234567888888999999877 99999999999
Q ss_pred CceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCCCCCc
Q 038818 260 SIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQV 338 (486)
Q Consensus 260 g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~ 338 (486)
|+++++|++|.|+......+.....++ ..|.+++ .|.++++ ..+|.++.+++ ... .+. +....
T Consensus 258 gillI~DEv~tG~GrtG~~~a~~~~~i-~pDiv~l--sK~lggG~~pigav~~~~~-i~~-~~~--~~~~~--------- 321 (474)
T PLN02624 258 NVLMIADEIQTGLARTGKMLACDWEEV-RPDVVIL--GKALGGGVIPVSAVLADKD-VML-CIK--PGEHG--------- 321 (474)
T ss_pred CCEEEEeccccCcCcCcchhhHHhcCC-CCCEEEe--cccccCCCCcceeeeecHH-HHh-Hhc--cCCcC---------
Confidence 999999999976321111111111233 4687886 4988866 46888877543 222 221 10000
Q ss_pred cCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhC----CCC-eEEecCCCeeEEEEEeecCCC
Q 038818 339 VDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGG----DNR-FEIVAPRNFAVVCFRVLPSAS 413 (486)
Q Consensus 339 ~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~-~~~~~~~~~~~v~f~~~~~~~ 413 (486)
.++ ++.+....++.+++..+-.+ ++.++..++.++|++.|++ .+. +.-+ .+...++.+.+..+.
T Consensus 322 -----~T~-~g~pl~~aaa~aaLe~l~~~---~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~v-rg~G~~~~i~l~~~~- 390 (474)
T PLN02624 322 -----STF-GGNPLASAVAMAALQVVQDE---KLAERSAKLGQELRDQLQKIQKQFPKLIKEV-RGRGLLNAVVLNSPK- 390 (474)
T ss_pred -----CCC-CCCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHHhCCCceEEE-EeeEEEEEEEecCCC-
Confidence 011 11111122223333333222 3444556666777666654 332 2212 123344454443211
Q ss_pred CCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 414 GLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 414 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
. ......++.+.|.+.|+++ .+. +..++|++. +...+++||+++++.|+++++.
T Consensus 391 -------~--~~~~a~~~~~~L~e~GV~v-~p~---~~~~lR~~p-~l~~t~e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 391 -------L--GPVSAYDVCLKLKERGLLA-KPT---HDTIIRLAP-PLSISEDELQECSKALSDVLEH 444 (474)
T ss_pred -------c--ChHHHHHHHHHHHhCCeEE-ecC---CCCEEEEEC-CccCCHHHHHHHHHHHHHHHHH
Confidence 0 0123456777788888753 332 356899997 4578889999999999988754
No 273
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.68 E-value=2.6e-14 Score=145.50 Aligned_cols=342 Identities=15% Similarity=0.072 Sum_probs=190.2
Q ss_pred HHHHHHHHHhhcCCC-----ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHH
Q 038818 87 AGFLGEMLSSGFNVV-----GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQI 161 (486)
Q Consensus 87 ~~~~~~~l~~~~n~~-----~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~ 161 (486)
...+.+.+...++.. ...|....+..++.+.+.+|+.+..|.+.+ ..++++|+|+++++..++.+....
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~-----~~~I~it~Ga~~al~~~~~~l~~~- 120 (416)
T PRK09440 47 EDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNIS-----PQNIALTNGSQSAFFYLFNLFAGR- 120 (416)
T ss_pred HHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCC-----hhhEEEccChHHHHHHHHHHHhcc-
Confidence 455666666555432 134554455678999999999988776432 127899999998886666554321
Q ss_pred HHHccccCCCCeEEEe-cCCCchHHHHHHHHcCCC-CCCeEEEecCCCC-CcccCHHHHHHHHHHHHHCCCccEEEEeec
Q 038818 162 LNEIGRENISRLVVYG-SDQTHSALQKAAQIAGID-PKNFRAIKTTKSS-SFTLTPESLQAAIDLDIQAGLIPLFLCATV 238 (486)
Q Consensus 162 ~~~~~~~~~~~~~v~~-s~~~H~s~~~a~~~~G~g-~~~v~~v~~d~~~-~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~ 238 (486)
+.+ .+++.|++ ...+++.....+...|.- ...+..++++.++ .+.+|+++|+ +.+ .+.+++++.
T Consensus 121 ----~~~-~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~------~~~~i~l~~ 187 (416)
T PRK09440 121 ----RAD-GSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDE------DTGAICVSR 187 (416)
T ss_pred ----ccC-CCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCC------CceEEEEec
Confidence 000 03456666 467777666655433320 0022334443321 3679999997 221 235788889
Q ss_pred CCccccccCC---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCch
Q 038818 239 GTTAITTVDP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPN 315 (486)
Q Consensus 239 gtt~~G~idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~ 315 (486)
++||||.+-+ +++|+++|++|++|+++|.+|+-... ...+.........--.+..++.|++....-+|+++.. +.
T Consensus 188 P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~-~~~~~~~~~~~~~~vI~~~SfSK~~~pGlRiG~~i~~-~~ 265 (416)
T PRK09440 188 PTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFP-GIIFSEATPLWNPNIILCMSLSKLGLPGVRCGIVIAD-EE 265 (416)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCC-CcchhhcCccccCCeEEEecccccCCCcceEEEEeCC-HH
Confidence 9999999955 78888899999999999999963211 0001110000011113456789975555668877653 33
Q ss_pred HHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHH-----HHHHHHHHHHHHHHHHhCC
Q 038818 316 ALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRN-----FLRSHVRMAQLFQELVGGD 390 (486)
Q Consensus 316 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~-----~~~~~~~~a~~l~~~L~~~ 390 (486)
... .+.....+. +.....+...++.+.+....+.+ +.+...+..+.+.+.|.+.
T Consensus 266 l~~-~~~~~~~~~--------------------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~ 324 (416)
T PRK09440 266 IIE-ALSNMNGII--------------------SLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRY 324 (416)
T ss_pred HHH-HHHHHHHHh--------------------ccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 332 221110000 00113334444444442222222 2233344455555665442
Q ss_pred -C--CeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeEC-C--------EeEEEEEe
Q 038818 391 -N--RFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVA-G--------IYFIRFAV 458 (486)
Q Consensus 391 -~--~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-~--------~~~lR~~~ 458 (486)
+ ++++..+.....+.+.+.+... + ..++.+.+.++|+.+..+..+. + ..++|+++
T Consensus 325 l~~~~~~~~~p~gg~fiw~~~~~~~~-----------~--~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~ 391 (416)
T PRK09440 325 LPDEPCLIHKPEGAIFLWLWFKDLPI-----------T--TEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNY 391 (416)
T ss_pred cccCCeEEecCCCceEEEEECCCCCC-----------C--HHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEe
Confidence 2 3554433333444444432110 1 2345666667787654443331 1 25899999
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHHHhhcC
Q 038818 459 GATLTEDRHVIAAWKVVQEKLDGILATS 486 (486)
Q Consensus 459 ~~~~tt~~did~~i~~l~~~~~~l~~~~ 486 (486)
.. ++++++++++.|.++++++.++|
T Consensus 392 ~~---~~~~l~~~i~~l~~~~~~~~~~~ 416 (416)
T PRK09440 392 VQ---DDEEIEKGIAILAEEVEKAYAES 416 (416)
T ss_pred cC---CHHHHHHHHHHHHHHHHHHhhcC
Confidence 52 57799999999999998887765
No 274
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.68 E-value=2.7e-14 Score=144.31 Aligned_cols=324 Identities=13% Similarity=0.055 Sum_probs=196.9
Q ss_pred HHHHHHHHhhcCC-CccccccChhhHHHHHHHHHHHHHHcCC--CCCCccCCCcce--EEcCCchHHHHHHHHHHHHHHH
Q 038818 88 GFLGEMLSSGFNV-VGFNWMSSPAATELENIVMDWLGEMLKL--PKSFLFSGTGGG--VIQGTTCEAILCTLAAARDQIL 162 (486)
Q Consensus 88 ~~~~~~l~~~~n~-~~~~~~~~~~~~~le~~~~~~l~~l~g~--~~~~~~~~~~~~--~~t~ggt~a~~~al~~a~~~~~ 162 (486)
..+.+.+...... ....|....+..++.+.+.+|+.+..+. +++ .. ++|+|+++|+..++.+....
T Consensus 47 ~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~-------~i~v~iT~Ga~~al~~~~~~l~~~-- 117 (396)
T PRK09257 47 RAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAG-------RVATVQTPGGTGALRVGADFLKRA-- 117 (396)
T ss_pred HHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccC-------eEEEEecCCccHHHHHHHHHHHHh--
Confidence 4566666665533 2335766667788888888888765442 222 34 89999999987776543210
Q ss_pred HHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcc
Q 038818 163 NEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTA 242 (486)
Q Consensus 163 ~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~ 242 (486)
.+++.|++.+.++.....+++.+|+ +++.+|....+++.+|+++|+++++... ....+++.+.++||
T Consensus 118 -------~pGd~Vlv~~P~y~~~~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~~~~~~---~~~~~~i~~~p~NP 184 (396)
T PRK09257 118 -------FPDAKVWVSDPTWPNHRAIFEAAGL---EVKTYPYYDAATKGLDFDAMLADLSQAP---AGDVVLLHGCCHNP 184 (396)
T ss_pred -------CCCCeEEECCCCcccHHHHHHHcCC---cEEEEeccccccCccCHHHHHHHHHhCC---CCCEEEEeCCCCCC
Confidence 0678899999999999999999999 9999998322247899999999887421 11246677889999
Q ss_pred ccccC---CchHHHHHHHHhCceEEeeccccchhccCc-cchhh--hcCCCCCCceeeccccccCC-CCcceEEEe--eC
Q 038818 243 ITTVD---PLGPLCDIAKRYSIWVHVDAAYAGSACICP-EFRHF--IDGIEGADSFSLNAHKWFFT-TLDCCCLWV--KN 313 (486)
Q Consensus 243 ~G~id---pl~~I~~i~~~~g~~lhvD~a~g~~~~~~~-~~~~~--~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~--~~ 313 (486)
||.+- .+++|+++|++||+|+++|.+|........ ..... +.+...--.+..++.|.++. ..-+|++++ .+
T Consensus 185 TG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~ 264 (396)
T PRK09257 185 TGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAED 264 (396)
T ss_pred CCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCC
Confidence 99984 478889999999999999999976432101 11111 11111111456779999985 677898874 33
Q ss_pred chHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhc--------hHHHHHHHHHHHHHHHHHHH
Q 038818 314 PNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFG--------VANLRNFLRSHVRMAQLFQE 385 (486)
Q Consensus 314 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g--------~~g~~~~~~~~~~~a~~l~~ 385 (486)
+..+.+............ ..+ ...+...++.+.+. .+.++++.++..+..+.+.+
T Consensus 265 ~~~~~~~~~~~~~~~~~~--------------~~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~ 327 (396)
T PRK09257 265 AEEADRVLSQLKATIRTN--------------YSN---PPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVE 327 (396)
T ss_pred HHHHHHHHHHHHHHhhhh--------------cCC---CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332211111000000000 000 01111122222221 23345566777888888999
Q ss_pred HHhCCC---CeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCC
Q 038818 386 LVGGDN---RFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATL 462 (486)
Q Consensus 386 ~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~ 462 (486)
.|++.. ++++. .|..+.+.|--.+ .+ .+.+.+.+.|+. +.+. .|+++.+
T Consensus 328 ~L~~~~~~~~~~~~-~p~gg~~~w~~l~--------------~~---~~~~l~~~~~V~-~~p~-------~ri~~~~-- 379 (396)
T PRK09257 328 ALKAKGPSRDFDFI-ARQRGMFSYSGLT--------------PE---QVDRLREEFGVY-AVGS-------GRINVAG-- 379 (396)
T ss_pred HHHhcCCCCCcccc-cccceEEEecCCC--------------HH---HHHHHHHcCCEE-EcCC-------CeEEEee--
Confidence 998762 25543 4555555442111 12 223333455664 3331 1999853
Q ss_pred CcHHHHHHHHHHHHHH
Q 038818 463 TEDRHVIAAWKVVQEK 478 (486)
Q Consensus 463 tt~~did~~i~~l~~~ 478 (486)
.++++|+++++.|+++
T Consensus 380 ~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 380 LNESNIDYVAEAIAAV 395 (396)
T ss_pred CCHHHHHHHHHHHHhh
Confidence 5777999999999875
No 275
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.68 E-value=7.5e-14 Score=139.22 Aligned_cols=287 Identities=11% Similarity=0.027 Sum_probs=175.1
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDP 196 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~ 196 (486)
++++.+++.++++++ +.++|+|+++++..++.+. . ++..|++...++..+...++.+|+
T Consensus 61 ~Lr~aia~~~~v~~~-------~I~it~G~~~~i~~~~~~l-~-----------~g~~vlv~~P~y~~~~~~~~~~g~-- 119 (360)
T PRK07392 61 ELRLALAQHHQLPPE-------WILPGNGAAELLTWAGREL-A-----------QLRAVYLITPAFGDYRRALRAFGA-- 119 (360)
T ss_pred HHHHHHHHHhCcChh-------hEEECCCHHHHHHHHHHHh-C-----------CCCeEEEECCCcHHHHHHHHHcCC--
Confidence 344555666677765 7899999988876555432 1 334677888999999999999999
Q ss_pred CCeEEEecCCCCCc---ccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchh
Q 038818 197 KNFRAIKTTKSSSF---TLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSA 273 (486)
Q Consensus 197 ~~v~~v~~d~~~~~---~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~ 273 (486)
+++.+|.+.++.+ ..+++.+++... .+.+++++.++||||.+-+.++|.++++++++ +++|.+|..+.
T Consensus 120 -~~~~v~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~ 190 (360)
T PRK07392 120 -TVKELPLPLDQPSPGLTLRLQTLPPQLT-------PNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFL 190 (360)
T ss_pred -eEEEEecccccCCcccccCHHHHHHhcc-------CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhc
Confidence 9999999754322 245555544321 23578888999999999999999999999985 66799997654
Q ss_pred ccCccchhhhcCCCCC-C-ceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCC
Q 038818 274 CICPEFRHFIDGIEGA-D-SFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSR 350 (486)
Q Consensus 274 ~~~~~~~~~~~~~~~a-D-si~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr 350 (486)
... .....+..+... . .+..++.|.++ ...-+|+++..++ .+.+.......+
T Consensus 191 ~~~-~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~-~~~~~~~~~~~~----------------------- 245 (360)
T PRK07392 191 PPD-AEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPD-RLQRWQQWRDPW----------------------- 245 (360)
T ss_pred cCc-cccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHH-HHHHHHhhCCCC-----------------------
Confidence 211 111111111111 1 44567899998 5567898887543 333211111000
Q ss_pred CCCchHHHHHHHHhchHH-HHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHH
Q 038818 351 RFRALKLWLVLRSFGVAN-LRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNR 429 (486)
Q Consensus 351 ~~~~l~~~~~l~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 429 (486)
....+..+++...+.... .+...+...+.++++.+.|++++++.+. ++..+.+.+++... ..
T Consensus 246 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~~fl~~~~~~~----------------~~ 308 (360)
T PRK07392 246 PVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLTPL-PSAANFLLVQSQGS----------------AL 308 (360)
T ss_pred CCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCCEEEEEcCCC----------------HH
Confidence 112334444444443322 3334455667788899999888888765 33434333333211 23
Q ss_pred HHHHHH-HhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 430 KLLESI-NASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 430 ~l~~~l-~~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
++.+++ .+.|+.+..+..+. +.+++|+++.. .++.+++.++|+++.
T Consensus 309 ~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~----~~~~~~l~~al~~~~ 357 (360)
T PRK07392 309 QLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRT----EAENQRLLEALAAIL 357 (360)
T ss_pred HHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCC----HHHHHHHHHHHHHHh
Confidence 456554 35677555444333 35799999853 335567777766654
No 276
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.67 E-value=4.1e-14 Score=142.07 Aligned_cols=291 Identities=13% Similarity=0.085 Sum_probs=169.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH
Q 038818 111 ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ 190 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 190 (486)
..+++.++.+++++..+.+ ..+++++|++||..|+..++... + ++.+|......|-+...+..
T Consensus 69 ~~~~~~~la~~l~~~~~~~---------~~~~~~sG~~a~~~A~~~a~~~~-------g-~~~vi~~~~~~Hg~~~~~~~ 131 (377)
T PRK02936 69 TNSLQEEVASLLAENSAGD---------LVFFCNSGAEANEAALKLARKHT-------G-KSKIVTFEQSFHGRTFGTMS 131 (377)
T ss_pred CCHHHHHHHHHHHhcCCCC---------EEEEeCCcHHHHHHHHHHHHHhc-------C-CCeEEEECCCcCCCcHHhhh
Confidence 3567777888888876542 47899999999999999887531 0 23455555667766555554
Q ss_pred HcCCCC---------CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC----CchHHHHHHH
Q 038818 191 IAGIDP---------KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD----PLGPLCDIAK 257 (486)
Q Consensus 191 ~~G~g~---------~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id----pl~~I~~i~~ 257 (486)
..|... ..+..+|. -|+++|++.+.+. +.+|++....++.|.+. ++++|.++|+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~~------~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~ 198 (377)
T PRK02936 132 ATGQEKIKEGFGPLLPGFTHVPF-------NDIKALKEVMNEE------VAAVMLEVVQGEGGVIPADPAFLQEVQTLCK 198 (377)
T ss_pred ccCCccccccCCCCCCCceEeCC-------CCHHHHHHhccCC------eEEEEEecccCCCCCccCCHHHHHHHHHHHH
Confidence 443210 01222222 1789999888643 34677777777777663 3999999999
Q ss_pred HhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCC
Q 038818 258 RYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQ 337 (486)
Q Consensus 258 ~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 337 (486)
+||+++++|++|.++......+.....++ ..|.+ ...|.++....+|+++.++ .. .+.+... ...
T Consensus 199 ~~~~~lI~DEv~~g~g~~g~~~~~~~~~~-~~di~--t~sK~l~~G~~ig~v~~~~-~~-~~~~~~~---~~~------- 263 (377)
T PRK02936 199 KFGALLIIDEVQTGIGRTGTLFAYEQFGL-DPDIV--TVAKGLGNGIPVGAMIGKK-EL-GTAFGPG---SHG------- 263 (377)
T ss_pred HcCCEEEEeccccCCCcCchhhHHHhhCC-CCcEE--EEcccccCCCccEEEEEcH-HH-HhhccCC---CCC-------
Confidence 99999999999976322111111001122 34654 4689998656688777653 22 2222110 000
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhC----CCCeEEecCCCeeEEEEEeecCCC
Q 038818 338 VVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGG----DNRFEIVAPRNFAVVCFRVLPSAS 413 (486)
Q Consensus 338 ~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~~~~~~ 413 (486)
.+. ....+.+.+++..+..-..++..++..++.+++++.|++ ++.+..+. +...++.+.+..
T Consensus 264 ------~t~----~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~-~~g~~~~i~~~~--- 329 (377)
T PRK02936 264 ------STF----GGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEHLECVKNIR-GKGLMIGIECTE--- 329 (377)
T ss_pred ------CCC----CCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEe-ecceEEEEEecc---
Confidence 011 112333333333331111124455666666666666654 33322221 233445555432
Q ss_pred CCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 414 GLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 414 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
. ...+.+.+.++|+++.. .+..++|+++ +...++++|+++++.|+++
T Consensus 330 -----------~--~~~~~~~l~~~gv~v~~----~g~~~lRi~p-~~~~~~~~i~~~i~~l~~~ 376 (377)
T PRK02936 330 -----------E--VAPVIEQLREEGLLVLS----AGPNVIRLLP-PLVVTKEELDQAVYLLKKV 376 (377)
T ss_pred -----------h--HHHHHHHHHHCCeEEec----CCCCEEEEEC-CcccCHHHHHHHHHHHHHh
Confidence 1 34567777788875433 2346899997 3456788999999999875
No 277
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.67 E-value=3.1e-14 Score=145.71 Aligned_cols=368 Identities=13% Similarity=0.107 Sum_probs=202.4
Q ss_pred CHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHH-HHHHHcCC--CCCCccCCCcceEEcCCchHHHHHHHHHHHHHH
Q 038818 85 SIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMD-WLGEMLKL--PKSFLFSGTGGGVIQGTTCEAILCTLAAARDQI 161 (486)
Q Consensus 85 ~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~-~l~~l~g~--~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~ 161 (486)
.++..+.++..+..+ ..|...++..++.+++.+ ++.+.++. +.. +...+++|+|+++|+..++.+.....
T Consensus 113 ~~~~~v~e~~~~~~~---~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~----~~~~I~vT~Ga~~al~~~~~aL~~~~ 185 (527)
T PRK09275 113 DADEFVYELVDGIIG---DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPK----GEFDLFAVEGGTAAMCYIFDSLKENG 185 (527)
T ss_pred CCCHHHHHHHHHHhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCC----CcCeEEEeCCHHHHHHHHHHHHhhhh
Confidence 446667776555543 247766777777777777 44443332 111 01268999999999888776532211
Q ss_pred HHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCc
Q 038818 162 LNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTT 241 (486)
Q Consensus 162 ~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt 241 (486)
+- .+++.|++..+.+......+++.|.+. .++.++.+++++|.+|+++|++++++.+ .+|+++.++|
T Consensus 186 ll------~pGD~Vlv~~P~y~~Y~~~~~l~g~~~-~~v~v~~~~~~~f~~d~~~l~~~~~~~t------kai~l~nP~N 252 (527)
T PRK09275 186 LL------KAGDKIALMTPIFTPYLEIPELPRYDL-EVVHINADEENEWQYPDSELEKLRDPSI------KALFLVNPSN 252 (527)
T ss_pred cC------CCCCEEEEeCCChHHHHHHHHHcCCCe-EEEEeecCcccCCCCCHHHHHhhcCCCC------CEEEEeCCcC
Confidence 11 167788889899999988888887622 4455555544468999999999776433 3788889999
Q ss_pred cccccCC---chHHHHHHHH--hCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccC-CCCcceEEEeeCch
Q 038818 242 AITTVDP---LGPLCDIAKR--YSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPN 315 (486)
Q Consensus 242 ~~G~idp---l~~I~~i~~~--~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~ 315 (486)
|||.+-+ +++|+++|++ +++|+++|.+|+.+.. .+...+.....--.+..++.|.++ +..-.|+++..++.
T Consensus 253 PTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~ 329 (527)
T PRK09275 253 PPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD---DFRSLFAVLPYNTILVYSFSKYFGATGWRLGVIALHEDN 329 (527)
T ss_pred CcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc---cccCHHHhCCCCEEEEeehhhhccCcHhHHhhhhcCchh
Confidence 9999966 7888888965 4999999999976432 222222111112244566899997 44568888776653
Q ss_pred HHHHHhcCCc--------ccccCccCCCCCccCCCCc--------cccCCCCCCchHHHH-----HHHHh--chHHHHHH
Q 038818 316 ALIKALSTNP--------EFLRNKASDSKQVVDYKDW--------QITLSRRFRALKLWL-----VLRSF--GVANLRNF 372 (486)
Q Consensus 316 ~~~~~~~~~~--------~y~~~~~~~~~~~~~~~~~--------~~~~sr~~~~l~~~~-----~l~~~--g~~g~~~~ 372 (486)
.+.+....-+ .++..-.. ......+.+. ....+-.......++ ....+ +.+..+++
T Consensus 330 v~~~~i~~l~~~~~~~~~~ry~~~~~-~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~~~~~ 408 (527)
T PRK09275 330 VFDKLIAKLPEEKKKELDKRYSSLTT-DPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAYKKAM 408 (527)
T ss_pred HHHHHHHhccHHHHHHHHhhhhhccC-CcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHHHHHH
Confidence 2221111000 00000000 0000000000 000000111111121 12222 23445666
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEe-cCCCeeEEEEE-eecCCCCCCCCCCccc---hHHHHHHHHHHHH-hcCcEEEeee
Q 038818 373 LRSHVRMAQLFQELVGGDNRFEIV-APRNFAVVCFR-VLPSASGLGDGKANEG---ANELNRKLLESIN-ASGQLYVSHG 446 (486)
Q Consensus 373 ~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~~v~f~-~~~~~~~~~~~~~~~~---~~~~~~~l~~~l~-~~g~~~~~~~ 446 (486)
.+.+.+..+.+.+.|. +.+. .+|.....+|- +....... .+.+... ......++..+|. +.|++++++.
T Consensus 409 ~~~~~~Rr~~l~~~Lg----~~~~~~~p~g~fY~~~di~~~~~~~-~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~ 483 (527)
T PRK09275 409 KDIIRRRYKALYEGLG----LPEPEDPNNAAYYTLIDLEEWAEKN-YGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGG 483 (527)
T ss_pred HHHHHHHHHHHHHHcC----CCCcCCCCCeeEEEEEEhHHhhhhc-cCchhhhhhhccCCHHHHHHHHHhcCCEEEeCch
Confidence 6677777777777772 2222 24555555542 22100000 0000000 0000234444554 4577666665
Q ss_pred eEC-CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 447 MVA-GIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 447 ~~~-~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
.+. +..++|+|+.+ .+++++.++.+.|++++++..
T Consensus 484 ~Fg~~~~~vRis~a~--~~~~~~~~~~~rl~~~l~~y~ 519 (527)
T PRK09275 484 GFGGPEWSVRVSLAN--LNEEDYAKIGKAIRKLLDEYY 519 (527)
T ss_pred hhCCCCCeEEEEEec--CCHHHHHHHHHHHHHHHHHHH
Confidence 554 35689999964 477799999999998887654
No 278
>PRK05839 hypothetical protein; Provisional
Probab=99.67 E-value=6.1e-14 Score=140.51 Aligned_cols=316 Identities=11% Similarity=0.072 Sum_probs=187.3
Q ss_pred HHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHH-HHHHHcc
Q 038818 88 GFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARD-QILNEIG 166 (486)
Q Consensus 88 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~-~~~~~~~ 166 (486)
..+.+.+...... ...|....+..++.+.+.+|+++.+|.+.. ..++++|+|+++++...+.+... .
T Consensus 40 ~~~~~a~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~-----~~~I~it~G~~~al~~~~~~~~~~~------ 107 (374)
T PRK05839 40 KFIQDALKNNAHL-LNKYPKSAGEESLREAQRGFFKRRFKIELK-----ENELIPTFGTREVLFNFPQFVLFDK------ 107 (374)
T ss_pred HHHHHHHHHHhhc-cCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-----cceEEEecCcHHHHHHHHHHHhcCC------
Confidence 4455555544322 334544445568888899999998885322 12789999988887655454321 1
Q ss_pred ccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 167 RENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 167 ~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..|+++..++..+...++..|+ +++.+|.++++.+.+|+++.+ ++ . +.+|+++.++||||.+
T Consensus 108 ----~gd~vlv~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~d~~~~~--~~-~------~k~v~i~nP~NPTG~~ 171 (374)
T PRK05839 108 ----QNPTIAYPNPFYQIYEGAAIASRA---KVLLMPLTKENDFTPSLNEKE--LQ-E------VDLVILNSPNNPTGRT 171 (374)
T ss_pred ----CCCEEEECCCCchhhHHHHHhcCC---EEEEeecccccCCcCCcchhh--hc-c------ccEEEEeCCCCCcCcc
Confidence 466788888999999999999999 999999976555677765442 22 1 3467778999999998
Q ss_pred CC---chHHHHHHHHhCceEEeeccccchhccCccchhhhc-----CCCC-CC-ceeeccccccC-CCCcceEEEeeCch
Q 038818 247 DP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFID-----GIEG-AD-SFSLNAHKWFF-TTLDCCCLWVKNPN 315 (486)
Q Consensus 247 dp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~-----~~~~-aD-si~~~~hK~l~-~p~~~g~~~~~~~~ 315 (486)
-+ +++|+++|+++|+++++|.+|+.... .+....... +... -. .+..++.|.++ ...-+|+++.. +.
T Consensus 172 ~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~-~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~-~~ 249 (374)
T PRK05839 172 LSLEELIEWVKLALKHDFILINDECYSEIYE-NTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGD-AS 249 (374)
T ss_pred cCHHHHHHHHHHHHHcCCEEEeccchhhccc-CCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecC-HH
Confidence 54 67888889999999999999976421 111111111 0001 12 44567899754 55678888764 33
Q ss_pred HHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Q 038818 316 ALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF-GVANLRNFLRSHVRMAQLFQELVGGDNRFE 394 (486)
Q Consensus 316 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 394 (486)
... .+.....+... + ...+...++...+ ..+.+++..++..++.+.+.+.|. +.
T Consensus 250 ~~~-~~~~~~~~~~~-----------------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~----~~ 304 (374)
T PRK05839 250 ILK-KYKAYRTYLGC-----------------A---SPLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREILG----IT 304 (374)
T ss_pred HHH-HHHHHHhhcCC-----------------C---CChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhcC----CC
Confidence 332 22111011100 0 0111112222122 234455566666666666666552 22
Q ss_pred EecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHh-cCcEEEeeeeEC----CEeEEEEEecCCCCcHHHHH
Q 038818 395 IVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINA-SGQLYVSHGMVA----GIYFIRFAVGATLTEDRHVI 469 (486)
Q Consensus 395 ~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~----~~~~lR~~~~~~~tt~~did 469 (486)
.++....+.+++.+ ..++.+++.+ .|+.+..+..+. +.+++|+++. . +++++.
T Consensus 305 --~p~gg~fi~~~~~~-----------------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~--~-~~~~~~ 362 (374)
T PRK05839 305 --IPPATFYVWLPVDN-----------------DEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALV--Y-DTPKLE 362 (374)
T ss_pred --CCCeeEEEEEeCCC-----------------hHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEec--C-CHHHHH
Confidence 23333334444431 1245556654 787554433222 2479999994 2 477999
Q ss_pred HHHHHHHHHHH
Q 038818 470 AAWKVVQEKLD 480 (486)
Q Consensus 470 ~~i~~l~~~~~ 480 (486)
+.++.|.++++
T Consensus 363 ~~l~~l~~~l~ 373 (374)
T PRK05839 363 KALEIIKTYLE 373 (374)
T ss_pred HHHHHHHHHhh
Confidence 99999988764
No 279
>PRK08637 hypothetical protein; Provisional
Probab=99.67 E-value=6.3e-14 Score=141.15 Aligned_cols=337 Identities=11% Similarity=0.048 Sum_probs=192.2
Q ss_pred CHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcC-CCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHH
Q 038818 85 SIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLK-LPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILN 163 (486)
Q Consensus 85 ~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g-~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~ 163 (486)
.....+.+.+..........|....+...+.+.+.+++.+..+ .... ....+++|+|+++++..++.+..+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~----~~~~I~it~G~~~al~~~~~~l~~---- 91 (388)
T PRK08637 20 MYLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGK----KMSLPIVTNALTHGLSLVADLFVD---- 91 (388)
T ss_pred chHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCcccccc----ccceeeEccchHHHHHHHHHHhcC----
Confidence 3334444444443233344565555566777777777665432 2211 012578999999988766655443
Q ss_pred HccccCCCCeEEEecCCCchHHHHHH-HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcc
Q 038818 164 EIGRENISRLVVYGSDQTHSALQKAA-QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTA 242 (486)
Q Consensus 164 ~~~~~~~~~~~v~~s~~~H~s~~~a~-~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~ 242 (486)
+++.|++..+++..+...+ ...|+ +++.+|++.+ ++.+|+++|+++++..... ...+++.+.++||
T Consensus 92 -------~gd~Vlv~~P~y~~~~~~~~~~~g~---~vv~v~~~~~-~~~~d~~~l~~~~~~~~~~--~~~~~~~~~P~NP 158 (388)
T PRK08637 92 -------QGDTVLLPDHNWGNYKLTFNTRRGA---EIVTYPIFDE-DGGFDTDALKEALQAAYNK--GKVIVILNFPNNP 158 (388)
T ss_pred -------CCCEEEEcCCCCccHHHHHHHhcCC---EEEEecccCC-CCcCCHHHHHHHHHhhccC--CCEEEEEeCCCCC
Confidence 6677888988888888765 46788 9999998422 3478999999988722111 2345777779999
Q ss_pred ccccCC---chHHHHHHHH-----hCceEEeeccccchhccCccchhhhc---CC-CCCCcee-eccccccC-CCCcceE
Q 038818 243 ITTVDP---LGPLCDIAKR-----YSIWVHVDAAYAGSACICPEFRHFID---GI-EGADSFS-LNAHKWFF-TTLDCCC 308 (486)
Q Consensus 243 ~G~idp---l~~I~~i~~~-----~g~~lhvD~a~g~~~~~~~~~~~~~~---~~-~~aDsi~-~~~hK~l~-~p~~~g~ 308 (486)
||.+-+ +++|+++|++ |++++++|.+|.............+. .. +++-.+. .++.|.++ ...-+|+
T Consensus 159 TG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~ 238 (388)
T PRK08637 159 TGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGF 238 (388)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEE
Confidence 998844 6777777775 89999999999765432111111111 11 1221232 27888655 4456999
Q ss_pred EEeeC-----chHHHHHhcCCc-ccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHH----HHHHHH
Q 038818 309 LWVKN-----PNALIKALSTNP-EFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNF----LRSHVR 378 (486)
Q Consensus 309 ~~~~~-----~~~~~~~~~~~~-~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~----~~~~~~ 378 (486)
+++.. +.... .+.... .+.... .. ....+...++...+....+.+. .....+
T Consensus 239 ~~~~~~~~~~~~l~~-~~~~~~~~~~~~~--------------~~---~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~ 300 (388)
T PRK08637 239 ITFGTKAGSSQTVKE-ALEKKVKGLIRSN--------------IS---NGPHPSQSAVLRALNSPEFDKEKQEKFQILKE 300 (388)
T ss_pred EEEccccCCcHHHHH-HHHHHHHHHhhcc--------------cC---CCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 88753 33322 221100 000000 00 1123333444444433333322 233444
Q ss_pred HHHHHHHHHhCC---CCeEEecCCCeeEEEE-EeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeECCEeE
Q 038818 379 MAQLFQELVGGD---NRFEIVAPRNFAVVCF-RVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVAGIYF 453 (486)
Q Consensus 379 ~a~~l~~~L~~~---~~~~~~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~~~~~ 453 (486)
..+.+.+.|++. +++.+. +|..+.+.+ ++.+ ....++.+.+. ++|+.... .+..+
T Consensus 301 r~~~~~~~l~~~~~~~~~~~~-~~~~g~~~~~~l~~---------------~~~~~l~~~l~~~~gv~~~~----~~~~~ 360 (388)
T PRK08637 301 RYEKTKEVLYDGKYDDAWQAY-PFNSGYFMCLKLKG---------------VDAEELRVHLLEKYGIGTIA----LNETD 360 (388)
T ss_pred HHHHHHHHHHhhCCCCCcccc-cccceEEEEecCCh---------------HHHHHHHHHHhhhcceEEEe----ccCCc
Confidence 455566666554 245554 444455444 4421 11346677775 45764432 24568
Q ss_pred EEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 454 IRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 454 lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
+|+++.. .+++++++.++.|.++++.+
T Consensus 361 iRi~~~~--~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 361 LRIAFSC--VEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred eEEEeec--CCHHHHHHHHHHHHHHHHhc
Confidence 9999964 46779999999999988754
No 280
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.67 E-value=1.2e-14 Score=141.74 Aligned_cols=338 Identities=14% Similarity=0.043 Sum_probs=208.9
Q ss_pred cceecCCCCCHH-HHHHHHHHhhcCCCcc------ccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchH
Q 038818 76 YFAYFPSSGSIA-GFLGEMLSSGFNVVGF------NWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCE 148 (486)
Q Consensus 76 ~~~~~~~~~~~~-~~~~~~l~~~~n~~~~------~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~ 148 (486)
-+.|.++|...| .++..+-.+.+|.+.. ....++.+.++-+++.+.|+++++.|+++ .-.++++|||.
T Consensus 5 ~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y-----~Vlfl~GggT~ 79 (364)
T PRK12462 5 QLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEY-----GVVFLQGGSSL 79 (364)
T ss_pred cceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCC-----eEEEEeccHHH
Confidence 346777765544 5555555566554331 22356778899999999999999998764 23455666776
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCe-EE-EecCCCchH--HHHHHHHcCCCCCCeEEEecCCCC--CcccCHHHHHHHHH
Q 038818 149 AILCTLAAARDQILNEIGRENISRL-VV-YGSDQTHSA--LQKAAQIAGIDPKNFRAIKTTKSS--SFTLTPESLQAAID 222 (486)
Q Consensus 149 a~~~al~~a~~~~~~~~~~~~~~~~-~v-~~s~~~H~s--~~~a~~~~G~g~~~v~~v~~d~~~--~~~~d~~~L~~~l~ 222 (486)
+.-.+++.... ++. ++ ++. ..+++ +.+-++.+| ++..+...+.. ....+++.++ +.
T Consensus 80 ~~ea~~~Nll~-----------~g~~~~~~~~-tG~fg~r~~~ea~~~g----~v~~~~~~~~~~~~~~p~~~~~~--~~ 141 (364)
T PRK12462 80 QFSMIPMNFSR-----------PGAAAPEYVT-TGYWSRKAIGEASRVA----AMRVVWDGAASGYRTLPSLAELD--WD 141 (364)
T ss_pred HHHHHHHHcCC-----------CCCcEEEEEe-CCHHHHHHHHHHHhcC----CceEecCcCCCCCCcCCCHHHhc--cC
Confidence 66544443322 222 33 222 46665 445555554 23333321111 1244566652 22
Q ss_pred HHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCC
Q 038818 223 LDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFT 302 (486)
Q Consensus 223 ~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~ 302 (486)
++ ..+|.+|+..|.+|...| ++.+.++..++||++-+.+....+ ++..|.+..+.+|.++
T Consensus 142 ~d------~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid--------~~~~dvi~agsQKnlg- 201 (364)
T PRK12462 142 AR------APFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFD--------VEAYGMVYAHAQKNLG- 201 (364)
T ss_pred CC------CcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCC--------hHHccEEEeeccccCC-
Confidence 21 347999999999999986 344446899999997655433332 2356999999999998
Q ss_pred CCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC-CCchHHHHHHHHhchH--HHHHHHHHHHHH
Q 038818 303 TLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR-FRALKLWLVLRSFGVA--NLRNFLRSHVRM 379 (486)
Q Consensus 303 p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~--g~~~~~~~~~~~ 379 (486)
|.|.++++++++.+ .+.-...|.|+...... . ...++ .+-+ +....+-.+++.+-.+ |++.+.++..+.
T Consensus 202 P~Gltvvivs~~al-~~~~~~~p~~ldy~~~~-----~-~~s~~-nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~k 273 (364)
T PRK12462 202 PAGVTVAIIRRALL-ERVPDTLPPMLDFRTHV-----E-HRSNY-NTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARK 273 (364)
T ss_pred CCceEEEEECHHHH-hhccccCCchhhHHHHH-----h-cCCCC-CCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 88999999998764 22222223332211000 0 00000 0100 1223344455555556 999999999999
Q ss_pred HHHHHHHHhCCCCeEEec-CC---CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEE
Q 038818 380 AQLFQELVGGDNRFEIVA-PR---NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIR 455 (486)
Q Consensus 380 a~~l~~~L~~~~~~~~~~-~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR 455 (486)
++.+++.|++.++|.... .+ ..-.|+|++.. .++.+++.+...+.|.+.+.+.. ..+.+|
T Consensus 274 a~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~--------------~~l~~~f~~~a~~~gl~~lkGhr--~vgg~R 337 (364)
T PRK12462 274 AAMLYATLDALNEVIDCHAHRAARSTMNVAFRFRQ--------------PRLDTLFKEQSTEAGFCGLSGHR--SIGGIR 337 (364)
T ss_pred HHHHHHHHHhCCCcccCCCChhhcCcceEEEEcCC--------------HHHHHHHHHHHHHCCCccccCCc--ccCceE
Confidence 999999999987665432 11 23467888754 35677888888888986555432 245599
Q ss_pred EEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 456 FAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 456 ~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
+|+-| ..+.+++++|++-+++..++
T Consensus 338 as~yn-a~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 338 ASLYN-AVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred EEcCC-CCCHHHHHHHHHHHHHHHHh
Confidence 99954 66777999999999887653
No 281
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.67 E-value=7.1e-14 Score=140.55 Aligned_cols=300 Identities=14% Similarity=0.045 Sum_probs=166.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecC-CCchHHHHHHHH
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSD-QTHSALQKAAQI 191 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~-~~H~s~~~a~~~ 191 (486)
....++.+++++++|.+ ..++++||++|+..++.+++...... +.++..|++.. ..|.+...+...
T Consensus 69 ~~~~~l~~~la~~~g~~---------~~~~~~sg~~a~~~a~~~~~~~~~~~----~~~~~~vi~~~~~yh~~~~~~~~~ 135 (379)
T TIGR00707 69 EPQEELAEKLVEHSGAD---------RVFFCNSGAEANEAALKLARKYTGDK----GKEKKKIIAFENSFHGRTMGALSA 135 (379)
T ss_pred HHHHHHHHHHHhhCCCC---------EEEEeCCcHHHHHHHHHHHHHHhhcc----CCCCCeEEEECCCcCCccHHHHHh
Confidence 44556777888888864 47899999999999988776432100 01233444444 444333333222
Q ss_pred cCCCCCCeEEEecCCCCCc--ccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc----CCchHHHHHHHHhCceEEe
Q 038818 192 AGIDPKNFRAIKTTKSSSF--TLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV----DPLGPLCDIAKRYSIWVHV 265 (486)
Q Consensus 192 ~G~g~~~v~~v~~d~~~~~--~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i----dpl~~I~~i~~~~g~~lhv 265 (486)
.+.........++..+-.+ ..|+++|++.+.+. +.+|+++..++++|.. +++++|.++|+++|+++++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~ 209 (379)
T TIGR00707 136 TGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDE------TAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIF 209 (379)
T ss_pred cCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhC------eeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 2210000011222211011 11899999988653 3366677776666754 2489999999999999999
Q ss_pred eccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCcc
Q 038818 266 DAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQ 345 (486)
Q Consensus 266 D~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 345 (486)
|++|.++............++ ..|.++ ..|.++.+..+|+++.++ +... .+.... . . . +
T Consensus 210 De~~~~~~~~g~~~~~~~~~~-~~d~~t--~sK~~~~G~riG~~~~~~-~~~~-~~~~~~--~-~-----------~--~ 268 (379)
T TIGR00707 210 DEVQTGIGRTGKFFAYEHYGI-EPDIIT--LAKGLGGGVPIGATLAKE-EVAE-AFTPGD--H-G-----------S--T 268 (379)
T ss_pred eccccCCCccchhhhHHhcCC-CCCEEE--EcccccCCcccEEEEEcH-HHHh-hhcCCC--C-C-----------C--C
Confidence 999975322111011001122 345554 589999767788887753 3322 221100 0 0 0 0
Q ss_pred ccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe---cCCCeeEEEEEeecCCCCCCCCCCcc
Q 038818 346 ITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIV---APRNFAVVCFRVLPSASGLGDGKANE 422 (486)
Q Consensus 346 ~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~---~~~~~~~v~f~~~~~~~~~~~~~~~~ 422 (486)
. ++......++..+++.+.. .++.++..++++++++.|+++ +.... .++..+++.+.+.+.
T Consensus 269 ~-~~~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~g~~~~~~~~~~----------- 332 (379)
T TIGR00707 269 F-GGNPLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEEL-GKNYPNKEVRGKGLMLGIELEAP----------- 332 (379)
T ss_pred C-CCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHH-HhhCCCCccccCceEEEEEecCc-----------
Confidence 0 1111222334444454422 245566777778888777654 22211 112344556655321
Q ss_pred chHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 423 GANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 423 ~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
..++.+.|.++|+.+. +. +..++|+++. ...++++++++++.|+++
T Consensus 333 -----~~~~~~~l~~~Gv~v~-~~---~~~~lRi~~~-~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 333 -----CKDIVKKALEKGLLVN-CA---GPKVLRFLPP-LIITKEEIDEAVSALEEA 378 (379)
T ss_pred -----HHHHHHHHHHCCcEEe-eC---CCCEEEEECC-CcCCHHHHHHHHHHHHHh
Confidence 2466777888897543 32 2468999973 446778999999999875
No 282
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.67 E-value=1.9e-13 Score=138.28 Aligned_cols=298 Identities=11% Similarity=0.078 Sum_probs=171.5
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcC--
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAG-- 193 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G-- 193 (486)
.++.+.|+++.+.+ ...++++|++||..|+..+|.......+ ..++.+|......|-+...+....|
T Consensus 85 ~~l~~~l~~~~~~~---------~~~~~~sGseA~e~a~klar~~~~~~~~--~~~~~ii~~~~~~HG~~~~~~~~~~~~ 153 (403)
T PRK05093 85 LRLAKKLIDATFAE---------RVFFANSGAEANEAAFKLARRYACDRHG--PEKTEIIAFHNSFHGRTLFTVSVGGQP 153 (403)
T ss_pred HHHHHHHHhhCCCC---------EEEEeCchHHHHHHHHHHHHHHHhhcCC--CCCCeEEEEcCCcCCchhhhHhhcCCh
Confidence 35556777776542 4689999999999999999876432111 1144566677777876554444322
Q ss_pred -----CC--CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHHHHHHhCce
Q 038818 194 -----ID--PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCDIAKRYSIW 262 (486)
Q Consensus 194 -----~g--~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~i~~~~g~~ 262 (486)
++ ...+..+|. -|++++++.+.+. +.+|++....+..|.+.| +++|.++|++||++
T Consensus 154 ~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~ 220 (403)
T PRK05093 154 KYSDGFGPKPADITHVPF-------NDLAAVKAVIDDH------TCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNAL 220 (403)
T ss_pred hhhhcCCCCCCCcEEeCC-------CCHHHHHHHhcCC------eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 11 112333432 2789999888532 345666644444444433 99999999999999
Q ss_pred EEeeccccchhccCccc-hhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCC
Q 038818 263 VHVDAAYAGSACICPEF-RHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDY 341 (486)
Q Consensus 263 lhvD~a~g~~~~~~~~~-~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 341 (486)
+++|.+|.+... .... .....++ ..|.+ +..|.+++.+..|.++.+++ . .+.+.. ....
T Consensus 221 lI~DEv~~g~g~-~g~~~~~~~~~~-~pdi~--s~sK~l~~G~rig~vv~~~~-i-~~~l~~---~~~~----------- 280 (403)
T PRK05093 221 LIFDEVQTGMGR-TGDLFAYMHYGV-TPDIL--TSAKALGGGFPIGAMLTTAE-I-ASHFKV---GTHG----------- 280 (403)
T ss_pred EEEechhhCCCC-CccchhhhhcCC-CCCEE--EecccccCCcceEEEEEcHH-H-HhhcCC---CCCC-----------
Confidence 999999986422 1111 0001122 34544 44699886677888887653 2 122211 0000
Q ss_pred CCccccCCCCCCchHHHHH---HHHhchHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEecCC--CeeEEEEEeecCCCCC
Q 038818 342 KDWQITLSRRFRALKLWLV---LRSFGVANLRNFLRSHVRMAQLFQELVGGDN-RFEIVAPR--NFAVVCFRVLPSASGL 415 (486)
Q Consensus 342 ~~~~~~~sr~~~~l~~~~~---l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~--~~~~v~f~~~~~~~~~ 415 (486)
.+. ....+.++++ ++.+-. .+..++..++.+++.+.|+++. .+.++... ...++.+.+.+..
T Consensus 281 --~t~----~~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~--- 348 (403)
T PRK05093 281 --STY----GGNPLACAVAEAVFDIINT---PEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQY--- 348 (403)
T ss_pred --CCC----CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcc---
Confidence 010 1122333333 333311 2455677778888888887651 11111111 2233444443210
Q ss_pred CCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 416 GDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 416 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
.....++.+.+.++|+++. + .+..++|+++. ...++++|+++++.|.++++++.
T Consensus 349 ---------~~~~~~~~~~l~~~Gv~v~-~---~g~~~lRl~~~-~~~~~~~i~~~~~~l~~~l~~~~ 402 (403)
T PRK05093 349 ---------KGRARDFLNAAAEEGVMVL-V---AGPDVLRFAPS-LVIEEADIDEGLARFEKAVAKVV 402 (403)
T ss_pred ---------hhHHHHHHHHHHHCCeEEe-c---CCCCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHhc
Confidence 1234567788888897543 2 23468999874 45578899999999999887764
No 283
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.66 E-value=7.7e-14 Score=137.03 Aligned_cols=286 Identities=17% Similarity=0.110 Sum_probs=195.4
Q ss_pred HHHHHHHHHcC-CCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCC
Q 038818 117 IVMDWLGEMLK-LPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGID 195 (486)
Q Consensus 117 ~~~~~l~~l~g-~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g 195 (486)
++++.+++.+| .+.+ .++++.|+++.+-..+.+.+. +++.|+++..++......++..|.
T Consensus 61 ~l~~a~a~~~~~~~~~-------~V~~gnGsde~i~~l~~~~~~-----------~gd~vl~~~Ptf~~Y~~~a~~~g~- 121 (356)
T COG0079 61 ELRAALAEYYGVVDPE-------NVLVGNGSDELIELLVRAFVE-----------PGDTVLIPEPTFSMYEIAAQLAGA- 121 (356)
T ss_pred HHHHHHHHHhCCCCcc-------eEEEcCChHHHHHHHHHHhhc-----------CCCEEEEcCCChHHHHHHHHhcCC-
Confidence 44566778887 5544 566677877776555555544 556788888899889999999999
Q ss_pred CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh--CceEEeeccccchh
Q 038818 196 PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY--SIWVHVDAAYAGSA 273 (486)
Q Consensus 196 ~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~--g~~lhvD~a~g~~~ 273 (486)
+++.||.++ +.+|++++.+++.+++ .+|+++.++||||..-+.++|.++++.. +.+++||+||.-+.
T Consensus 122 --~~~~v~~~~---~~~d~~~~~~~~~~~~------~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~ 190 (356)
T COG0079 122 --EVVKVPLKE---FRLDLDAILAAIRDKT------KLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFS 190 (356)
T ss_pred --eEEEecccc---cccCHHHHHHhhhcCC------CEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcC
Confidence 999999873 7999999999988743 3899999999999998888888877754 88999999996644
Q ss_pred ccCccchhhhcCCCCCC--ceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCC
Q 038818 274 CICPEFRHFIDGIEGAD--SFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSR 350 (486)
Q Consensus 274 ~~~~~~~~~~~~~~~aD--si~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr 350 (486)
- +..... +..-+ .+.=++.|.++ +..-+|+ .+.+++.........++|-
T Consensus 191 ~--~~~~~l---~~~~~nlivlRTfSKa~gLAGlRlGy-~ia~~~~i~~l~~vr~p~~---------------------- 242 (356)
T COG0079 191 P--ESSLEL---LKYPPNLIVLRTFSKAFGLAGLRVGY-AIANPELIAALNKVRPPFN---------------------- 242 (356)
T ss_pred C--chhhhh---ccCCCCEEEEEecHHhhhcchhceee-ccCCHHHHHHHHHhcCCCC----------------------
Confidence 3 111111 11222 45556889777 4456887 4555555544334444431
Q ss_pred CCCchHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHH
Q 038818 351 RFRALKLWLVLRSFG-VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNR 429 (486)
Q Consensus 351 ~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 429 (486)
...++..++...+. .+.+++..+...+-+.++.+.|++++ +.-+.+...|.+.+++.. .. ..
T Consensus 243 -v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~aNFvlv~~~~--------------~~-~~ 305 (356)
T COG0079 243 -VSSPALAAAIAALRDADYLEESVERIREERERLYAALKALG-LFGVFPSQANFVLVRVPD--------------AE-AA 305 (356)
T ss_pred -CCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcEEEEECCC--------------cc-HH
Confidence 12233344444332 25677888888899999999999986 553335556777777653 12 34
Q ss_pred HHHHHHHhcCcEEEeeee-ECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 430 KLLESINASGQLYVSHGM-VAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 430 ~l~~~l~~~g~~~~~~~~-~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
.+.+.|.++|+++-.... .....++|+++. ++++-++++++|+++...
T Consensus 306 ~l~~~L~~~giivR~~~~~~~~~~~lRitvg----t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 306 ALAEALLKKGILVRDCSSVGLLPGYLRITVG----TPEENDRLLAALREVLKG 354 (356)
T ss_pred HHHHHHHHCCEEEEeCCCCCCCCCeEEEEeC----CHHHHHHHHHHHHHHHhc
Confidence 567778888986433322 123569999984 444669999999988754
No 284
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.66 E-value=1e-13 Score=139.84 Aligned_cols=300 Identities=14% Similarity=0.101 Sum_probs=164.4
Q ss_pred HHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCC
Q 038818 115 ENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGI 194 (486)
Q Consensus 115 e~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~ 194 (486)
..++.+.++++.+.+ ..++++||++||..|+.++|.....+ |..+ +..+|......|-+..-+....+.
T Consensus 75 ~~~la~~l~~~~~~~---------~v~~~~sGseA~~~al~~ar~~~~~~-G~~~-r~~vi~~~~~yhg~~~~~~~~~~~ 143 (389)
T PRK01278 75 QERLAERLVENSFAD---------KVFFTNSGAEAVECAIKTARRYHYGK-GHPE-RYRIITFEGAFHGRTLATIAAGGQ 143 (389)
T ss_pred HHHHHHHHHhhCCCC---------EEEEcCCcHHHHHHHHHHHHHHHHhc-CCCC-CCEEEEECCCcCCCcHHHHhccCC
Confidence 344556677765432 57999999999999999998753321 1110 223444555555554444333332
Q ss_pred CCCCeEEEecCCCCCc----ccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc----CCchHHHHHHHHhCceEEee
Q 038818 195 DPKNFRAIKTTKSSSF----TLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV----DPLGPLCDIAKRYSIWVHVD 266 (486)
Q Consensus 195 g~~~v~~v~~d~~~~~----~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i----dpl~~I~~i~~~~g~~lhvD 266 (486)
....-...|..+ ++ ..|+++|++++++. +.+|+++...+++|.+ +++++|+++|++||+++++|
T Consensus 144 ~~~~~~~~~~~~--~~~~~~~~d~~~l~~~l~~~------~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~D 215 (389)
T PRK01278 144 EKYLEGFGPLVP--GFDQVPFGDIEALKAAITPN------TAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFD 215 (389)
T ss_pred hhhcccCCCCCC--CceEeCCCCHHHHHHhhCCC------eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 100000011111 11 25899999988642 3467777666777733 57999999999999999999
Q ss_pred ccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccc
Q 038818 267 AAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQI 346 (486)
Q Consensus 267 ~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 346 (486)
++|.++......+.....++ ..|.+ +..|.++..+..|.++.+++ .. +.+.... . . .+.
T Consensus 216 Ev~~g~g~~g~~~~~~~~~~-~pdi~--t~sK~l~~G~~ig~~~~~~~-~~-~~~~~~~----~----------~--~t~ 274 (389)
T PRK01278 216 EVQCGMGRTGKLFAHEWAGV-TPDIM--AVAKGIGGGFPLGACLATEE-AA-KGMTPGT----H----------G--STY 274 (389)
T ss_pred ccccCCCcCCcceeecccCC-CCCEE--EEehhccCCcceEEEEEcHH-HH-hccCCCC----C----------C--CCC
Confidence 99986422111111011122 24654 45798886667888887654 22 2221100 0 0 011
Q ss_pred cCCCCCCchHHHHH---HHHhchHHHHHHHHHHHHHHHHHHHHHhC----CCCeEEecCCCeeEEEEEeecCCCCCCCCC
Q 038818 347 TLSRRFRALKLWLV---LRSFGVANLRNFLRSHVRMAQLFQELVGG----DNRFEIVAPRNFAVVCFRVLPSASGLGDGK 419 (486)
Q Consensus 347 ~~sr~~~~l~~~~~---l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~ 419 (486)
....+.+.++ ++.+-.+ +..++..++.+++++.|++ .+++-....+...++.+.+...
T Consensus 275 ----~~~~~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~~-------- 339 (389)
T PRK01278 275 ----GGNPLAMAVGNAVLDVILAP---GFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVVP-------- 339 (389)
T ss_pred ----CccHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEecC--------
Confidence 1123333333 4433222 2334555556666665543 3322111122223334433211
Q ss_pred CccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 420 ANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 420 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
..++.+.+.++|+...+. +..++|+++. ...++++|+++++.|+++++++
T Consensus 340 --------~~~~~~~l~~~GV~~~p~----~~~~lR~~p~-~~~~~~~i~~~l~~l~~~l~~~ 389 (389)
T PRK01278 340 --------NRDLVQALRDEGLLTVGA----GDNVVRLLPP-LIITEEEIDEALERLERAAESL 389 (389)
T ss_pred --------HHHHHHHHHHCCeEEeec----CCCEEEEeCC-cccCHHHHHHHHHHHHHHHHhC
Confidence 246677777788754332 3468999973 3467889999999999887653
No 285
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.66 E-value=8.3e-14 Score=139.85 Aligned_cols=307 Identities=12% Similarity=0.026 Sum_probs=182.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH
Q 038818 111 ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ 190 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 190 (486)
..+.+.++.+++++..+++ ..++++||++||..|+.++|....+ +.. .+..+|......|-+...++.
T Consensus 76 ~~~~~~~la~~l~~~~~~~---------~v~f~~SGseA~e~Aik~ar~~~~~--~~~-~r~~ii~~~~~yHG~t~~~~~ 143 (395)
T PRK03715 76 YNEPMAKLAGLLTQHSCFD---------KVFFANSGAEANEGAIKLARKWGRK--HKN-GAYEIITFDHSFHGRTLATMS 143 (395)
T ss_pred cCHHHHHHHHHHhhccCCC---------EEEEeCCcHHHHHHHHHHHHHHhhc--cCC-CCcEEEEECCCcCCChHHHHh
Confidence 3567777778888765432 5799999999999999999864211 101 134456666678888777776
Q ss_pred HcCCCCCCeEEEecCCC-C-CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHHHHHHhCceEE
Q 038818 191 IAGIDPKNFRAIKTTKS-S-SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCDIAKRYSIWVH 264 (486)
Q Consensus 191 ~~G~g~~~v~~v~~d~~-~-~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~i~~~~g~~lh 264 (486)
..|...-.....|.... . .-..|+++|++.+.+. ..+|++.......|.+-| +++|.++|++||++++
T Consensus 144 ~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI 217 (395)
T PRK03715 144 ASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDK------TVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLI 217 (395)
T ss_pred hcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCC------ceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 66642101111111110 0 0024788999888532 347888888888888877 9999999999999999
Q ss_pred eeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCc
Q 038818 265 VDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDW 344 (486)
Q Consensus 265 vD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 344 (486)
+|+++.|+.....-+.....++ ..|.+++ .|.++..+++|.++.+++-. .+ .+.+..+
T Consensus 218 ~DEv~tG~GRtG~~~a~~~~gv-~PDi~t~--gK~lg~G~p~~av~~~~~i~---~~--~~~~~~~-------------- 275 (395)
T PRK03715 218 VDEVQTGCGRTGTLFAYELSGI-EPDIMTL--GKGIGGGVPLAALLAKAEVA---VF--EAGDQGG-------------- 275 (395)
T ss_pred EeccccCCCCCcchhhHhhcCC-CCceeee--hhhhhCCcceEEEEEccccc---cc--cCCCcCC--------------
Confidence 9999986322111111111133 4787776 48888767788888776521 11 1111100
Q ss_pred cccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC---CCeEEecCCCeeEEEEEeecCCCCCCCCCCc
Q 038818 345 QITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGD---NRFEIVAPRNFAVVCFRVLPSASGLGDGKAN 421 (486)
Q Consensus 345 ~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~ 421 (486)
|+ .+.+....+...++..+-. .+..++..++.++|++.|+++ .++.-+ .-...++.+.+..+
T Consensus 276 T~-~g~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~i~~v-rG~Glm~~i~l~~~---------- 340 (395)
T PRK03715 276 TY-NGNPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEERGLEGE-RGEGLLRALLLGKD---------- 340 (395)
T ss_pred CC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcCCcCeE-EcceeEEEEEecCc----------
Confidence 11 1111222333444444422 346777888888888888653 123212 12345556655421
Q ss_pred cchHHHHHHHHHHH---HhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 422 EGANELNRKLLESI---NASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 422 ~~~~~~~~~l~~~l---~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
...++.+.+ .++|++. .+. +...+|++. ....|++|||++++.|+++++++
T Consensus 341 -----~~~~~~~~~~~~~~~Gi~~-~~~---~~~~lR~~p-~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 341 -----IGPQIVEKARDMQPDGLLL-NAP---RPNLLRFMP-ALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred -----hHHHHHHHHHhccCCCEEE-eec---CCCEEEEeC-CcccCHHHHHHHHHHHHHHHHhh
Confidence 112333333 3348643 221 235799998 56888999999999999998764
No 286
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.65 E-value=1.4e-13 Score=139.14 Aligned_cols=303 Identities=13% Similarity=0.060 Sum_probs=169.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCC-CeEEEecCCCchHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENIS-RLVVYGSDQTHSALQKAAQ 190 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~-~~~v~~s~~~H~s~~~a~~ 190 (486)
.....++.++++++.|.+ ..++++||++|+..|+.+++...-+ .+.. ..++......|-....+..
T Consensus 80 ~~~~~~la~~l~~~~~~~---------~v~~~~gg~eA~~~al~~a~~~~~~----~~~~~~~ii~~~~~yhg~~~~~~~ 146 (396)
T PRK02627 80 IEPQEELAEKLVELSGMD---------KVFFCNSGAEANEAAIKLARKYGHK----KGIEKPEIITAENSFHGRTLATLS 146 (396)
T ss_pred CHHHHHHHHHHHhhcCCC---------EEEECCCcHHHHHHHHHHHHHHhcc----cCCCCCeEEEECCCcCcccHHHHH
Confidence 456667778888887653 5799999999999999988765210 0111 3344444445544333333
Q ss_pred HcCCCCCCeEEEecCCCCCc----ccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc----CCchHHHHHHHHhCce
Q 038818 191 IAGIDPKNFRAIKTTKSSSF----TLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV----DPLGPLCDIAKRYSIW 262 (486)
Q Consensus 191 ~~G~g~~~v~~v~~d~~~~~----~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i----dpl~~I~~i~~~~g~~ 262 (486)
..+.........|... +. ..|+++|++++.+. +.+|+++...+++|.. +.+++|.++|++||++
T Consensus 147 ~~~~~~~~~~~~~~~~--~~~~~~~~d~~~l~~~i~~~------~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~ 218 (396)
T PRK02627 147 ATGQPKYQEGFEPLVE--GFIYVPFNDIEALKAAITDK------TAAVMLEPIQGEGGVNPADKEYLQALRELCDENGIL 218 (396)
T ss_pred hcCCccccccCCCCCC--CceEeCCCCHHHHHHhcCCC------eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 3332100001112111 11 22899999988432 4467777777777743 3489999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCC
Q 038818 263 VHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYK 342 (486)
Q Consensus 263 lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 342 (486)
+++|++|+++............++ ..|.++ ..|.++.....|.++.+++ .. +.+... ... .
T Consensus 219 lI~DE~~~g~g~~g~~~~~~~~~~-~pdi~t--~sK~~~~G~rig~~~~~~~-~~-~~~~~~----~~~----------~ 279 (396)
T PRK02627 219 LILDEVQTGMGRTGKLFAYQHYGI-EPDIMT--LAKGLGGGVPIGAVLAKEK-VA-DVFTPG----DHG----------S 279 (396)
T ss_pred EEEechhcCCCccCceeeehhcCC-CCCEEE--EcchhhCCcccEEEEEcHH-HH-hccCCC----CCC----------C
Confidence 999999986422111011001122 346555 4699886677898887643 22 222110 000 0
Q ss_pred CccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhC----CCCeEEecCCCeeEEEEEeecCCCCCCCC
Q 038818 343 DWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGG----DNRFEIVAPRNFAVVCFRVLPSASGLGDG 418 (486)
Q Consensus 343 ~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~ 418 (486)
+. ....+.+.+++..+..-...+..++..++.+++++.|.+ .+.+..+ .....++.+.+..
T Consensus 280 --t~----~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~i~~~~-------- 344 (396)
T PRK02627 280 --TF----GGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIKEV-RGLGLMIGIELDR-------- 344 (396)
T ss_pred --CC----CCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCeeee-ccCcEEEEEEecC--------
Confidence 00 112233333333321100123445555666666665544 3322222 2233455555521
Q ss_pred CCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 419 KANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 419 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
+ ..++.+.+.++|+.+ .+. +..++|+++. ...++++|+++++.|+++++++
T Consensus 345 ------~--~~~~~~~l~~~Gv~v-~~~---~~~~lRi~~~-~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 345 ------P--AAEIVKKALEKGLLI-NVT---GDNVLRLLPP-LIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred ------c--HHHHHHHHHHCCeEE-eec---CCCEEEEECC-cccCHHHHHHHHHHHHHHHHhh
Confidence 1 346777777788754 332 2367999873 4567889999999999988765
No 287
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.65 E-value=1.6e-13 Score=133.43 Aligned_cols=316 Identities=13% Similarity=0.045 Sum_probs=192.2
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH
Q 038818 111 ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ 190 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 190 (486)
.+++|.++.+.+.++++.-+ ..-|+++||||++.|+..||... | ++.+|......|-+.+....
T Consensus 91 Pte~Ei~~Aell~~~~p~~e--------~vrfvnSGTEAtmsAiRlARa~T-------g-R~kIikF~G~YHG~~D~~lv 154 (432)
T COG0001 91 PTELEVELAELLIERVPSIE--------KVRFVNSGTEATMSAIRLARAYT-------G-RDKIIKFEGCYHGHSDSLLV 154 (432)
T ss_pred CCHHHHHHHHHHHHhcCccc--------EEEEecchhHHHHHHHHHHHHhh-------C-CCeEEEEcCCCCCCccHHHh
Confidence 36788888899999987633 46899999999999999999864 1 33444456666765554443
Q ss_pred HcC-------------CCC---CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----ch
Q 038818 191 IAG-------------IDP---KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LG 250 (486)
Q Consensus 191 ~~G-------------~g~---~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~ 250 (486)
-.| ++. ..++.+|.+ |++.|++++++. |.....|++.-.-.+.|.|-| ++
T Consensus 155 ~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-------D~~al~~~~~~~---g~~IAaVIvEPv~gn~g~i~p~~~Fl~ 224 (432)
T COG0001 155 KAGSGAATLGSPSSPGVPADVAKHTLVLPYN-------DLEALEEAFEEY---GDDIAAVIVEPVAGNMGVVPPEPGFLE 224 (432)
T ss_pred hcCcCcccCCCCCCCCCChhhhccEEEecCC-------CHHHHHHHHHHc---CCcEEEEEeccccCCCCCCCCCHHHHH
Confidence 332 211 134455543 899999999864 344667888888888899877 78
Q ss_pred HHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccC
Q 038818 251 PLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRN 330 (486)
Q Consensus 251 ~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~ 330 (486)
+|.++|+++|+.|+.|+...|+-..... ....-++ ..|..++ .|.+++..++|.+--|.+ .+. .+. ..+.+++
T Consensus 225 ~Lr~lt~e~G~lLI~DEViTGFR~~~gG-aq~~~gi-~PDlttl--GKiIGGGlP~ga~gGr~e-iM~-~~~-p~g~vyq 297 (432)
T COG0001 225 GLRELTEEHGALLIFDEVITGFRVALGG-AQGYYGV-EPDLTTL--GKIIGGGLPIGAFGGRAE-IME-QLA-PLGPVYQ 297 (432)
T ss_pred HHHHHHHHcCcEEEEecchhhcccCCcc-cccccCc-Ccchhhh--hhhhcCCcceeeeccHHH-HHh-hhC-CCCCccc
Confidence 9999999999999999998775432111 1111122 4566554 699999999999887654 222 111 1111221
Q ss_pred ccCCCCCccCCCCccccCCCCCCchHHHHH---HHHhch-HH-HHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEE
Q 038818 331 KASDSKQVVDYKDWQITLSRRFRALKLWLV---LRSFGV-AN-LRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVC 405 (486)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~---l~~~g~-~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~ 405 (486)
.++-+...+.+.+. ++.+-. ++ |+.+.+.-.+++.-|.+.+.+. ++.+.......+++
T Consensus 298 ----------------aGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~-g~~~~v~~~gsm~~ 360 (432)
T COG0001 298 ----------------AGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERH-GIPLTVNRVGSMFG 360 (432)
T ss_pred ----------------cCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh-CCCeEEeeecceEE
Confidence 12223344444443 443322 22 4444444444444455555554 55554444456777
Q ss_pred EEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 406 FRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 406 f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
+.+.+...+.-+.+...+.. ...++...|.++|+ ++.+..++ ..+.+...+++|||+++++++++.+++..
T Consensus 361 i~F~~~~~~n~~da~~sd~~-~~~~~~~~~l~~GV-~l~ps~~e------a~flS~ahte~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 361 IFFTEEGVRNYADAKRSDVE-RFAKFFHHLLNRGV-YLAPSQFE------AGFLSTAHTEEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred EEecCCCCCCHHHHHhhchH-HHHHHHHHHHhCCc-ccCCcccc------ceeeecccCHHHHHHHHHHHHHHHHHhhc
Confidence 77665321100000011222 23455558889997 56655332 33445667888999999999999887753
No 288
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.65 E-value=4.2e-13 Score=136.45 Aligned_cols=317 Identities=13% Similarity=0.003 Sum_probs=178.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
++.+.++.+.|++++.-..+ ..+|+++||||+..|+..||.....+ +..+ +..+|......|-...-+...
T Consensus 84 ~~~~~~la~~l~~~~p~~~~-------~v~f~~sGseA~e~A~klar~~~~~~-~~~~-r~~ii~~~~~yHG~t~~~ls~ 154 (423)
T PRK05964 84 HEPAERLAQRLVALTPGGLD-------HVFFSDSGSVAVEVALKMALQYWRNR-GEPG-RSRFLSLRGGYHGDTIGTMSV 154 (423)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEEcCCcCCccHHHHhc
Confidence 34455667788887631111 57999999999999999999763221 1111 233444454555433333332
Q ss_pred cCCC---------CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeec-CCccccccCC----chHHHHHHH
Q 038818 192 AGID---------PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATV-GTTAITTVDP----LGPLCDIAK 257 (486)
Q Consensus 192 ~G~g---------~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~-gtt~~G~idp----l~~I~~i~~ 257 (486)
.+-+ ...+..+|....+....++++|++.+++. +..+..|++.. .....|.+-| +++|.++|+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~---~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~ 231 (423)
T PRK05964 155 GDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKH---AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICD 231 (423)
T ss_pred CCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhC---CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHH
Confidence 2210 01234444432111122378888888642 22344566654 3555565543 999999999
Q ss_pred HhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCC---cccccCccC
Q 038818 258 RYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTN---PEFLRNKAS 333 (486)
Q Consensus 258 ~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~---~~y~~~~~~ 333 (486)
+||+++++|+++.|+.....-+.....++ ..|.+++ .|+++++ .+.|.++.+++ .. +.+... ..++.
T Consensus 232 ~~g~llI~DEv~tg~gr~G~~~a~~~~~v-~pDi~~~--~K~l~gG~~p~~av~~~~~-i~-~~~~~~~~~~~~~~---- 302 (423)
T PRK05964 232 RHGVLLIFDEIATGFGRTGTLFACEQAGV-SPDIMCL--SKGLTGGYLPLAATLCTAE-IF-EAFYSDDRAKAFMH---- 302 (423)
T ss_pred HcCCEEEEechhhCCCcCcchhHHHhcCC-CCCeeee--ehhhhcCcccceEEEEcHH-HH-HhhhcCCccccccc----
Confidence 99999999999966422111111111223 4677765 4999877 57888776543 32 223111 00010
Q ss_pred CCCCccCCCCccccCCCCCCchHHHHH---HHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEec--CCCeeEEEEEe
Q 038818 334 DSKQVVDYKDWQITLSRRFRALKLWLV---LRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVA--PRNFAVVCFRV 408 (486)
Q Consensus 334 ~~~~~~~~~~~~~~~sr~~~~l~~~~~---l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~--~~~~~~v~f~~ 408 (486)
..+-....+.+.++ +..+.. ..+.++..++.+++++.|+++..+..+. .....++.+.+
T Consensus 303 -------------~~T~~~np~~~aaa~a~l~~l~~---~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l 366 (423)
T PRK05964 303 -------------SPSYTANPLACAAANASLDLFED---EPVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVEL 366 (423)
T ss_pred -------------CCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEe
Confidence 01111233333333 333322 2456777888888888887653322221 12334556666
Q ss_pred ecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 409 LPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
.... . .+....+.+.+.++|+++ .+. + ..+|++. ....|++|||+++++++++++++
T Consensus 367 ~~~~---------~--~~~~~~l~~~l~~~Gv~v-~~~---~-~~lR~~p-~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 367 DRPV---------L--ERDGPALRAFALERGVLL-RPL---G-NTIYLMP-PYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred ccCc---------c--hhHHHHHHHHHHHCCeEE-Eec---C-CEEEEeC-CcccCHHHHHHHHHHHHHHHhhC
Confidence 4321 0 123457778888889753 332 1 4799987 46788889999999999998764
No 289
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.64 E-value=1.3e-13 Score=140.97 Aligned_cols=366 Identities=14% Similarity=0.114 Sum_probs=200.2
Q ss_pred HHHHHHHHHHhhcCCCccccccCh-hhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHH
Q 038818 86 IAGFLGEMLSSGFNVVGFNWMSSP-AATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNE 164 (486)
Q Consensus 86 ~~~~~~~~l~~~~n~~~~~~~~~~-~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~ 164 (486)
++..+.++..+..+. .|.... .....|+.+.+++.+.++..... .+..+.++|+|+++|+..++.+.....+-
T Consensus 108 ~~~~~~~~~~~~~~~---~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~--~~~~~V~it~Gat~al~~~~~~l~~~~ll- 181 (521)
T TIGR03801 108 PDAFLYEMCDGIIGD---NYPVPDRMLPHSEKIVHQYLIQEMCGNKPP--PGEFDLFAVEGGTAAMCYIFDSLKANELL- 181 (521)
T ss_pred CCHHHHHHHHHhhcC---CCCCCCCCHHHHHHHHHHHHHhhccCCCCC--CCcCeEEEeCCHHHHHHHHHHHHhHhhcC-
Confidence 345566655554443 343222 33455655557777765432110 00016899999999988777653221111
Q ss_pred ccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCC-----cccCHHHHHHHHHHHHHCCCccEEEEeecC
Q 038818 165 IGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSS-----FTLTPESLQAAIDLDIQAGLIPLFLCATVG 239 (486)
Q Consensus 165 ~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~-----~~~d~~~L~~~l~~~~~~g~~p~~vv~~~g 239 (486)
.+++.|++..+.+......+...|.|. +++.++.++.+. |.+|+++|++++++.+ .+|+++.+
T Consensus 182 -----~pGD~Vlv~~P~y~~y~~~~~l~~~g~-~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~------kai~l~nP 249 (521)
T TIGR03801 182 -----KKGDKIALMTPIFTPYLEIPELPRYDF-EVVRIKADEMTEDGTHTWQYPDKELEKLRDPSI------KALFVVNP 249 (521)
T ss_pred -----CCCCEEEEeCCCcHHHHHHHHHhcCCc-EEEEeecccccccccccCCCCHHHHHHhcCCCC------cEEEEeCC
Confidence 167788889899988888888875422 677777764322 8899999998765433 36778899
Q ss_pred CccccccCC---chHHHHHHHHh--CceEEeeccccchhccCccchhhhcCCCCCCceeeccccccC-CCCcceEEEeeC
Q 038818 240 TTAITTVDP---LGPLCDIAKRY--SIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKN 313 (486)
Q Consensus 240 tt~~G~idp---l~~I~~i~~~~--g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~ 313 (486)
+||||.+-+ +++|+++|++| ++|+++|.+|+.+.. .+...+.....--.+..+..|.++ +..-.|+++..+
T Consensus 250 ~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~sl~~~~~~~vI~v~SfSK~fg~~G~RlG~i~~~~ 326 (521)
T TIGR03801 250 SNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD---DFRSLFAELPYNTIGVYSFSKYFGATGWRLGTIALHK 326 (521)
T ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc---cccchhhhCCCCEEEEEcchhhccCchhhhhhhhcCc
Confidence 999999965 78888899987 899999999976432 222222212111245667899987 445688888765
Q ss_pred chHHHHHhcCC---------ccc--ccCccCCCCCccCCCCccccCCC--------CCCch-----HHHHHHHHh--chH
Q 038818 314 PNALIKALSTN---------PEF--LRNKASDSKQVVDYKDWQITLSR--------RFRAL-----KLWLVLRSF--GVA 367 (486)
Q Consensus 314 ~~~~~~~~~~~---------~~y--~~~~~~~~~~~~~~~~~~~~~sr--------~~~~l-----~~~~~l~~~--g~~ 367 (486)
+..+.+....- ..| +... .....+.+.....+| ..... ++.+....+ +.+
T Consensus 327 ~~v~d~li~~lp~~~~~~l~~ry~~~~~~----p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~~~~ 402 (521)
T TIGR03801 327 DNIFDKLIAELPEEKKKELDKRYSSLTTE----PRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDKENA 402 (521)
T ss_pred hHHHHHHHHhccHHHHHHHhhhhccccCC----hhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhccchh
Confidence 53221111100 000 0000 000000000000000 00111 111122222 234
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCeEEe-cCCCeeEEEE-EeecCCCCCCCCCCccch---HHHHHHHHHHHH-hcCcE
Q 038818 368 NLRNFLRSHVRMAQLFQELVGGDNRFEIV-APRNFAVVCF-RVLPSASGLGDGKANEGA---NELNRKLLESIN-ASGQL 441 (486)
Q Consensus 368 g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~~v~f-~~~~~~~~~~~~~~~~~~---~~~~~~l~~~l~-~~g~~ 441 (486)
..+++.+.+.+..+.+.+.| ++.+. .++.....+| .+...... ..+.+...- .....++..+|. +.|++
T Consensus 403 y~~~~~~~~~~R~~~l~~~L----g~~~~~~~~~g~~Y~~~di~~~~~~-~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~ 477 (521)
T TIGR03801 403 YKAETKDICRRREKLLFRGL----GLPLQEDPNDVAYYTLIDLEEWAEK-NYGEEFSSYLKKNYSPVDVLFRLAEETGIV 477 (521)
T ss_pred HHHHHHHHHHHHHHHHHHhc----CCCCcCCCCCeEEEEEeehHHHHHH-hcchHHHHHHhccCCHHHHHHHHHHhCCEE
Confidence 45566666777777777777 33322 3455555444 33211000 000000000 000224455554 55776
Q ss_pred EEeeeeECC-EeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 442 YVSHGMVAG-IYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 442 ~~~~~~~~~-~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
++++..+.. ..++|+|+.+ .+++++.++.+.|++++++..
T Consensus 478 v~PG~~Fg~~~~~vRisla~--l~~~~~~~~~~rl~~~~~~~~ 518 (521)
T TIGR03801 478 LLPGGGFGGPEWSVRVSLAN--LNEYDYAEIGRAIRKILDEYY 518 (521)
T ss_pred EeCchhcCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHHHH
Confidence 666655543 5679999953 577799999999999887654
No 290
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.64 E-value=2e-13 Score=134.80 Aligned_cols=273 Identities=12% Similarity=0.092 Sum_probs=169.9
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDP 196 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~ 196 (486)
++++++++.+|++++ ..++|+|+++++...+... +++.|+++...|..+...++..|+
T Consensus 59 ~lr~~ia~~~~~~~~-------~I~~t~G~~~~l~~~~~~~-------------~gd~V~v~~P~y~~~~~~~~~~g~-- 116 (337)
T PRK03967 59 PLREAIAEFYGLDAE-------NIAVGNGSDELISYLVKLF-------------EGKHIVITPPTFGMYSFYAKLNGI-- 116 (337)
T ss_pred HHHHHHHHHhCcCcc-------eEEEcCCHHHHHHHHHHHh-------------CCCeEEEeCCChHHHHHHHHHcCC--
Confidence 344556666677655 7889999998875433221 345677888888888888899999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccC
Q 038818 197 KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACIC 276 (486)
Q Consensus 197 ~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~ 276 (486)
+++.++.+. ++.+|++.|++.+. . ..+++++.++||||.+-+.++|.++++ +++++++|++|..+. .
T Consensus 117 -~~~~v~~~~--~~~~d~~~l~~~~~-~------~~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~~--~ 183 (337)
T PRK03967 117 -PVIDVPLKE--DFTIDGERIAEKAK-N------ASAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEFS--G 183 (337)
T ss_pred -eEEEeecCC--CCCcCHHHHHHhcc-C------CCEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhhc--c
Confidence 999999874 57899999987642 1 125667899999999999999999995 799999999997542 1
Q ss_pred ccchhhhcCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCch
Q 038818 277 PEFRHFIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRAL 355 (486)
Q Consensus 277 ~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l 355 (486)
..........+. -.+..++.|.++ ...-+|+++.. ++...........+ ....+
T Consensus 184 ~~~~~~~~~~~~-vi~l~S~SK~~~l~GlRiG~iv~~-~~~i~~~~~~~~~~-----------------------~~~~~ 238 (337)
T PRK03967 184 KSLIGLIDEYPN-LILLRTFSKAFGLAGIRAGYAIAN-EEIIDALYRIKPPF-----------------------SLNIL 238 (337)
T ss_pred cchHHHHhhCCC-EEEEecchHhhcchhhhheeeecC-HHHHHHHHhhcCCC-----------------------CCCHH
Confidence 111111111111 145577899998 44678888874 33332221111100 01223
Q ss_pred HHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHH
Q 038818 356 KLWLVLRSF-GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLES 434 (486)
Q Consensus 356 ~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 434 (486)
...++...+ ..+.+.+..++..+.++.+.+.|.+. ..++..+.+.+.+ .+.+.
T Consensus 239 ~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-----~~~~~~~~~~~~~---------------------~~~~~ 292 (337)
T PRK03967 239 TMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY-----AYPSDANFLLLKL---------------------DAYDY 292 (337)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC-----cCCCCCcEEEEhH---------------------HHHHH
Confidence 333333333 23445555566667777788888654 1233333332211 14566
Q ss_pred HHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 435 INASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 435 l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
+.++|+.+ .+......+++|+++. +.++.++++++|+++.+
T Consensus 293 l~~~gi~v-~~~~~~~~~~~Ri~~~----~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 293 LLENGIVV-RKLSGRLEGHIRVTVG----KREENDEFIKALKEIKE 333 (337)
T ss_pred HHHCCEEE-EeCCCCCCCeEEEecC----CHHHHHHHHHHHHHHHH
Confidence 66778643 3222223568999985 34578888888887654
No 291
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.64 E-value=2e-13 Score=134.53 Aligned_cols=277 Identities=12% Similarity=0.047 Sum_probs=176.4
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHH
Q 038818 109 PAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKA 188 (486)
Q Consensus 109 ~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a 188 (486)
+...++.+.+.+|+.+.. .+++ ..++|+|+++++..++.+. . .|++...++..+..+
T Consensus 56 ~~~~~Lr~aia~~~~~~~-~~~~-------~i~it~Ga~~~i~~~~~~~-------------d--~v~v~~P~y~~~~~~ 112 (335)
T PRK14808 56 SPDEELIEKILSYLDTDF-LSKN-------NVSVGNGADEIIYVMMLMF-------------D--RSVFFPPTYSCYRIF 112 (335)
T ss_pred CChHHHHHHHHHHhCCCC-CCcc-------eEEEcCCHHHHHHHHHHHh-------------C--cEEECCCCHHHHHHH
Confidence 345566666666665432 5554 7899999999887666543 1 266778899999999
Q ss_pred HHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeecc
Q 038818 189 AQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAA 268 (486)
Q Consensus 189 ~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a 268 (486)
++..|+ +++.+|.++ ++.++... +. .+.+++++.++||||.+-+.+++.+++ ++++|+++|.+
T Consensus 113 ~~~~g~---~~~~v~~~~--~~~~~~~~----~~-------~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~ 175 (335)
T PRK14808 113 AKAVGA---KFLEVPLTK--DLRIPEVN----VG-------EGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEA 175 (335)
T ss_pred HHHcCC---eEEEecCCC--cCCCChhH----cc-------CCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECc
Confidence 999999 999999875 35555332 11 124788899999999999999999999 58999999999
Q ss_pred ccchhccCccchhhhcCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCcccc
Q 038818 269 YAGSACICPEFRHFIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQIT 347 (486)
Q Consensus 269 ~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 347 (486)
|.-+. .......+...+. -.++.++.|.++ ...-+|+++..+ +...........+-
T Consensus 176 Y~~f~--~~~~~~~~~~~~~-vi~~~S~SK~~~l~GlRvG~~v~~~-~~~~~l~~~~~~~~------------------- 232 (335)
T PRK14808 176 YYEFH--GESYVDLLKKYEN-LAVIRTFSKAFSLAAQRIGYVVSSE-KFIDAYNRVRLPFN------------------- 232 (335)
T ss_pred hhhhc--CCchHHHHHhCCC-EEEEEechhhccCcccceEEEEeCH-HHHHHHHHhcCCCC-------------------
Confidence 96542 1111121211111 144567899999 455688888654 33332211111000
Q ss_pred CCCCCCchHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHH
Q 038818 348 LSRRFRALKLWLVLRSF-GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANE 426 (486)
Q Consensus 348 ~sr~~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~ 426 (486)
...+..+++...+ ..+.+.+..+...+..+++.+.|++. ++++. ++..+.+.+++... +
T Consensus 233 ----~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~g~f~~~~l~~~-------------~- 292 (335)
T PRK14808 233 ----VSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM-GYRIT-DSRGNFVFIFMEKE-------------E- 292 (335)
T ss_pred ----CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEC-CCCCeEEEEeCCCc-------------c-
Confidence 0112222222222 22445666667777788899999887 68765 45666665555421 1
Q ss_pred HHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 427 LNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 427 ~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
..++.+++.++|+.+. .. ..++|+++. +.++.++++++|++.
T Consensus 293 -~~~~~~~l~~~Gi~V~-~~----~~~~Risi~----~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 293 -KERLLEHLRAKNIAVR-SF----REGVRITIG----KREENDMILKELEVF 334 (335)
T ss_pred -HHHHHHHHHHCCeEEE-EC----CCCeEEecC----CHHHHHHHHHHHHhh
Confidence 2456777888897543 22 247999985 346899999998753
No 292
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.64 E-value=2.5e-13 Score=137.43 Aligned_cols=303 Identities=12% Similarity=0.041 Sum_probs=173.8
Q ss_pred HHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCC
Q 038818 115 ENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGI 194 (486)
Q Consensus 115 e~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~ 194 (486)
..++.+.++++++.+ ..++++||++||..|+.++|...... +..+ +..++......|-+..-+....|.
T Consensus 83 ~~~la~~l~~~~~~~---------~v~~~~sGseA~e~Alk~ar~~~~~~-~~~~-r~~ii~~~~~yHG~t~~~~~~~~~ 151 (406)
T PRK12381 83 VLRLAKKLIDATFAD---------RVFFCNSGAEANEAALKLARKYAHDR-YGSH-KSGIVAFKNAFHGRTLFTVSAGGQ 151 (406)
T ss_pred HHHHHHHHHhhCCCC---------eEEEcCCcHHHHHHHHHHHHHHHhhc-CCCC-CCeEEEECCCcCCcchhHHhhcCC
Confidence 345566777776542 57999999999999999998753211 1011 233455555667665544444442
Q ss_pred CC---------CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc-----cCCchHHHHHHHHhC
Q 038818 195 DP---------KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT-----VDPLGPLCDIAKRYS 260 (486)
Q Consensus 195 g~---------~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~-----idpl~~I~~i~~~~g 260 (486)
.. ..+..+| ..|+++|++.+.+. +.+|++. +.+++|. .+.+++|.++|++||
T Consensus 152 ~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~------~aaviiE-Pv~~~gg~~~~~~~~l~~l~~l~~~~~ 217 (406)
T PRK12381 152 PKYSQDFAPLPPDIRHAA-------YNDLNSASALIDDQ------TCAVIVE-PIQGEGGVIPADKAFLQGLRELCDRHN 217 (406)
T ss_pred cccccCCCCCCCCeeEeC-------CCCHHHHHHhccCC------eeEEEEe-CCcCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 10 0122222 23789999888632 3456665 4444443 356899999999999
Q ss_pred ceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccC
Q 038818 261 IWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVD 340 (486)
Q Consensus 261 ~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 340 (486)
+++++|++|.|+......+.....++ ..|.+ +..|.+++.+..|.++.+++ . .+.+... ...
T Consensus 218 ~llI~DEv~tG~gr~G~~~~~~~~~v-~pDi~--t~sK~l~gG~~ig~~~~~~~-~-~~~~~~~---~~~---------- 279 (406)
T PRK12381 218 ALLIFDEVQTGVGRTGELYAYMHYGV-TPDVL--TTAKALGGGFPIGAMLTTEK-C-ASVMTVG---THG---------- 279 (406)
T ss_pred CEEEEcchhhCCCCCcchhhhHhhCC-CCCEE--EehhhhhCCCceEEEEEcHH-H-HhhcCCC---CCC----------
Confidence 99999999965422111111111123 35654 45799986677888887644 2 2222110 000
Q ss_pred CCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEecCC--CeeEEEEEeecCCCCCCC
Q 038818 341 YKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDN-RFEIVAPR--NFAVVCFRVLPSASGLGD 417 (486)
Q Consensus 341 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~--~~~~v~f~~~~~~~~~~~ 417 (486)
.++ ++.+.....+..+++.+. -.++.++..++.+++.+.|+++. .+.++... ...++.+.+.+..
T Consensus 280 ---~t~-~~~pl~~aaa~a~l~~l~---~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~----- 347 (406)
T PRK12381 280 ---TTY-GGNPLASAVAGKVLELIN---TPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEY----- 347 (406)
T ss_pred ---CCC-CCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCch-----
Confidence 011 111112222333343432 22466777888888888887651 12222211 1233444443210
Q ss_pred CCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 418 GKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 418 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
......+.+.+.++|+++. + .+...+|+++. ...++++||++++.|+++++++.+
T Consensus 348 -------~~~~~~~~~~l~~~Gv~v~-~---~g~~~lRl~p~-~~~t~~~i~~~~~~l~~~l~~~~~ 402 (406)
T PRK12381 348 -------AGKAKQISQEAAKAGVMVL-I---AGPNVVRFAPA-LNISEEEITTGLDRFARACERFVS 402 (406)
T ss_pred -------hhHHHHHHHHHHHCCcEEe-e---CCCCEEEEeCC-ccCCHHHHHHHHHHHHHHHHHHHh
Confidence 1234567788888898543 2 13458999983 457788999999999999987754
No 293
>PRK07049 methionine gamma-lyase; Validated
Probab=99.62 E-value=2.3e-13 Score=137.82 Aligned_cols=223 Identities=14% Similarity=0.129 Sum_probs=151.7
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH
Q 038818 108 SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK 187 (486)
Q Consensus 108 ~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 187 (486)
.|....+|+ .++++.|.+ ..++++||+.|+..++.+... +++.|+++...+.....
T Consensus 82 ~Pt~~~Le~----~lA~leg~~---------~~iv~~sG~~Ai~~~l~al~~-----------~Gd~Vv~~~p~Y~~~~~ 137 (427)
T PRK07049 82 HPNSEIVED----RLAVYEGAE---------SAALFSSGMSAIATTLLAFVR-----------PGDVILHSQPLYGGTET 137 (427)
T ss_pred CcCHHHHHH----HHHHHhCCC---------cEEEEccHHHHHHHHHHHHhC-----------CCCEEEEcCCCcccHHH
Confidence 344455554 567777743 468899999887766655543 56677888887776654
Q ss_pred H----HHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHH-----
Q 038818 188 A----AQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKR----- 258 (486)
Q Consensus 188 a----~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~----- 258 (486)
. +...|+ +++.++ + ..|+++|+++|++..++ ..+.+|+++.++||+|.+-|+++|.+++++
T Consensus 138 ~~~~~l~~~Gi---~~v~~~-~-----~~d~~~l~~~l~~~~~~-~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~ 207 (427)
T PRK07049 138 LLAKTFRNFGV---GAVGFA-D-----GLSEAAIGAAAEAAAAK-GRVSLILIETPANPTNSLVDVAAVRRVADAIEARQ 207 (427)
T ss_pred HHHHHHHhcCc---EEEEEe-C-----CCCHHHHHHHHHhhccC-CCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcc
Confidence 4 355677 766665 2 35788898888754322 135678888999999999999999999988
Q ss_pred -hCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCC-C-CcceEEEeeCchHHHHHhcCCcccccCccCCC
Q 038818 259 -YSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFT-T-LDCCCLWVKNPNALIKALSTNPEFLRNKASDS 335 (486)
Q Consensus 259 -~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~-p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~ 335 (486)
++++++||.+|.+.....+ . . .++|.+..++.|++++ | .-+|+++ .+++......... ..
T Consensus 208 ~~~~~vvvDety~~~~~~~p-l----~--~g~divv~S~SK~~gG~~glr~G~vv-~~~~l~~~l~~~~-~~-------- 270 (427)
T PRK07049 208 GHRPIIACDNTLLGPVFQKP-L----E--HGADLSVYSLTKYVGGHSDLVAGAVL-GRKALIRQVRALR-SA-------- 270 (427)
T ss_pred cCCCEEEEECCccccccCCc-c----c--cCCCEEEEcCceeecCCCCcEEEEEE-CCHHHHHHHHHHH-Hh--------
Confidence 8999999999876543221 1 1 1689999999999995 3 2355554 4444332221110 00
Q ss_pred CCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Q 038818 336 KQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEI 395 (486)
Q Consensus 336 ~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 395 (486)
.+........|+.++.+ +.+..++++..+++..+.+.|+++|+++-
T Consensus 271 ------------~g~~ls~~~a~l~~r~L--~tl~~R~~~~~~~a~~la~~L~~~p~V~~ 316 (427)
T PRK07049 271 ------------IGTQLDPHSCWMLGRSL--ETLVLRMERANRNARAVAEFLRDHPKVEK 316 (427)
T ss_pred ------------cCCCCCHHHHHHHHcCC--ChHHHHHHHHHHHHHHHHHHHHhCCCccE
Confidence 11123445667776644 56788888999999999999999988754
No 294
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.62 E-value=1.3e-12 Score=133.08 Aligned_cols=313 Identities=11% Similarity=0.061 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.....++.+.|++++.-... ..+|+++|||||..|+..||...-.+ | +..+|......|-...-+...
T Consensus 123 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGsEAve~AlklAr~~t~~~----g-r~~ii~~~~~yHG~t~~~ls~ 190 (459)
T PRK11522 123 DPLRAMLAKTLAALTPGKLK-------YSFFCNSGTESVEAALKLAKAYQSPR----G-KFTFIATSGAFHGKSLGALSA 190 (459)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCCchHHHHHHHHHHHHHhccC----C-CcEEEEecCCCCCCcHHHhhh
Confidence 44455566777777632222 57899999999999999998763110 1 123343444455433333333
Q ss_pred cCCCC---------CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHHHHHH
Q 038818 192 AGIDP---------KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCDIAKR 258 (486)
Q Consensus 192 ~G~g~---------~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~i~~~ 258 (486)
.|-.. ..+..+|. -|.++++++|+.....+..+.+|++.......|.+-| ++++.++|++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~ 263 (459)
T PRK11522 191 TAKSTFRKPFMPLLPGFRHVPF-------GNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDE 263 (459)
T ss_pred cCCcccccCCCCCCCCCcccCC-------CCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHH
Confidence 33210 01222322 1788999988765333445667888888888898877 9999999999
Q ss_pred hCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCCCCC
Q 038818 259 YSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQ 337 (486)
Q Consensus 259 ~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 337 (486)
||+.+++|+++.|+.....-+.....++ ..|.+++ .|.++.. +++|.++.+++ ... .+... ++....
T Consensus 264 ~g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~--gK~lggG~~Pigav~~~~~-i~~-~~~~~-~~~~~~------ 331 (459)
T PRK11522 264 FGALLILDEVQTGMGRTGKMFACEHENV-QPDILCL--AKALGGGVMPIGATIATEE-VFS-VLFDN-PFLHTT------ 331 (459)
T ss_pred cCCEEEeccceecCCccchhhhhhccCC-CCCEEEe--chhhhCCCccceeEEEcHH-HHH-HhccC-CcccCC------
Confidence 9999999999966422111111111233 4677655 7888865 46888888754 222 22211 111110
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC-CeE-EecC--CCeeEEEEEeecCCC
Q 038818 338 VVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDN-RFE-IVAP--RNFAVVCFRVLPSAS 413 (486)
Q Consensus 338 ~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~-~~~~--~~~~~v~f~~~~~~~ 413 (486)
|+ .+.+....+..++++.+-.+ +..++..++.++|++.|+++. .+. ++.. -...++.+.+..
T Consensus 332 -------T~-~gnp~~~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~--- 397 (459)
T PRK11522 332 -------TF-GGNPLACAAALATINVLLEQ---NLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVD--- 397 (459)
T ss_pred -------CC-CCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecC---
Confidence 11 11111223334445554333 456778888888888886541 121 1111 123455555543
Q ss_pred CCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 414 GLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 414 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
++....+.+.+.++|++ +.+.. .+...+|++. ....|++|||+++++|.++++++.
T Consensus 398 -----------~~~~~~i~~~l~~~Gvl-~~~~~-~~~~~lr~~P-pl~~t~~~id~~l~~l~~~l~~~~ 453 (459)
T PRK11522 398 -----------NEIGYNFASEMFRQRVL-VAGTL-NNAKTIRIEP-PLTLTIEQCEQVLKAARKALAAMR 453 (459)
T ss_pred -----------chHHHHHHHHHHHCCeE-EEecC-CCCCEEEEEC-CccCCHHHHHHHHHHHHHHHHHHH
Confidence 12345677888888874 33322 2356899988 457788899999999999987664
No 295
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.61 E-value=1.7e-12 Score=131.81 Aligned_cols=317 Identities=15% Similarity=0.077 Sum_probs=175.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEE-cCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVI-QGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ 190 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~-t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 190 (486)
+....++.+.+++++..+... ....+| +++|||||..|+..||... + +..+|......|-...-+..
T Consensus 81 ~~~~~~lae~l~~~~~~~~~~----~~~~~f~~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~ls 148 (425)
T PRK09264 81 TTAKREFLETFEETILKPRGL----DYKVQFTGPTGTNAVEAALKLARKVT-------G-RTNIVAFTNGFHGMTLGSLA 148 (425)
T ss_pred cHHHHHHHHHHHHhhcCCcCC----CceEEEeCCCHHHHHHHHHHHHHHhc-------C-CCeEEEECCccCCccHHHHH
Confidence 344555667777765333211 002445 5799999999999998752 1 22344444445543333333
Q ss_pred HcC---------CCCCCeEEEecCCCCCc-ccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc----CCchHHHHHH
Q 038818 191 IAG---------IDPKNFRAIKTTKSSSF-TLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV----DPLGPLCDIA 256 (486)
Q Consensus 191 ~~G---------~g~~~v~~v~~d~~~~~-~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i----dpl~~I~~i~ 256 (486)
..| .....+..+|....... .-|+++|++.|++.......+.+|++.......|.+ +.+++|.++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc 228 (425)
T PRK09264 149 VTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLC 228 (425)
T ss_pred hcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHH
Confidence 322 11224556665311000 137788898886532111235577777777766764 3599999999
Q ss_pred HHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCC-CCcceEEEeeCchHHHHHhcCCcccccCccCCC
Q 038818 257 KRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFT-TLDCCCLWVKNPNALIKALSTNPEFLRNKASDS 335 (486)
Q Consensus 257 ~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~ 335 (486)
++||+++++|+++.|+......+.....++ ..|.+++ .|.++. .+++|+++++++ +. .+. +... .
T Consensus 229 ~~~g~llI~DEV~tG~GrtG~~~~~~~~~v-~PDi~t~--~K~l~~~G~pigav~~~~~--i~-~~~--~~~~-~----- 294 (425)
T PRK09264 229 RKHDILLIVDDIQAGCGRTGTFFSFERAGI-TPDIVTL--SKSISGYGLPMALVLIKPE--LD-VWK--PGEH-N----- 294 (425)
T ss_pred HHcCcEEEEechhhCCccccHHHHHhhcCC-CCCEEEe--ccccCCCccceEEEEEchh--hh-ccC--CCcc-C-----
Confidence 999999999999976422111111111123 4677776 498876 567899988754 21 111 1000 0
Q ss_pred CCccCCCCccccCCCCCCchHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHhC----CCCeEEecCC-CeeEEEEEee
Q 038818 336 KQVVDYKDWQITLSRRFRALKLWLVLRSFG-VANLRNFLRSHVRMAQLFQELVGG----DNRFEIVAPR-NFAVVCFRVL 409 (486)
Q Consensus 336 ~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~-~~~~v~f~~~ 409 (486)
.+. ....+++.+++..+- .-.-.+..++..++.++|++.|++ .|.+ +.... ...++.+.+.
T Consensus 295 --------~T~----~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~-~~~vrg~Gl~~~i~l~ 361 (425)
T PRK09264 295 --------GTF----RGNNLAFVTATAALEEYWSDDAFEKEVKAKGELVRERLEEIAAKYPGL-GAEVRGRGMMQGIDFG 361 (425)
T ss_pred --------CCC----CCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhCCCc-eecceecccEEEEEec
Confidence 010 112223222222220 111124556666677777776654 3322 11111 2234455553
Q ss_pred cCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 410 PSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
+ .....++.+.+.++|+.+ .+... ....||++. ....|+++|+++++.|+++++++.+
T Consensus 362 ~--------------~~~~~~l~~~~~~~Gv~~-~~~~~-~~~~lr~~p-~l~~t~~ei~~~~~~l~~~l~~~~~ 419 (425)
T PRK09264 362 D--------------GELAGKIAAEAFENGLII-ETSGP-EDEVVKLLP-PLTIDEEELEEGLDILEEAVAEVLA 419 (425)
T ss_pred C--------------hHHHHHHHHHHHHCCCEE-eccCC-CCCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2 234567788888899854 33211 135788876 4567888999999999999887654
No 296
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.61 E-value=1.8e-13 Score=131.55 Aligned_cols=317 Identities=15% Similarity=0.104 Sum_probs=197.9
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCch-HHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHH
Q 038818 111 ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTC-EAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAA 189 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt-~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~ 189 (486)
...+-..+..-+-+..|++.. ...++++.+| |+..+.+.+.|.+ . ....|+.+...|+|-.|++
T Consensus 54 ~~~ltn~l~~d~~~~~G~~~~------~~~~~vP~atgm~l~l~l~~l~~r---~------~a~~Viw~ridqkSc~kai 118 (389)
T PF05889_consen 54 LAKLTNSLVLDALRLAGLRSV------KSCFVVPMATGMSLTLCLLALRMR---P------KAKYVIWPRIDQKSCFKAI 118 (389)
T ss_dssp HHHHHHHHHHHHHHHTTHTTH------CEEEEESS-HHHHHHHHHHHHHHH---C------T--EEEEEEEETHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCccc------cceEEEecccccHHHHHHHHHhcc---c------CCceEEEeeccccchHHHH
Confidence 345555566666777898753 2456776666 5666666666622 1 3456777889999999999
Q ss_pred HHcCCCCCCeEEEecCC-CCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc-CCchHHHHHHHHhCceEEeec
Q 038818 190 QIAGIDPKNFRAIKTTK-SSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV-DPLGPLCDIAKRYSIWVHVDA 267 (486)
Q Consensus 190 ~~~G~g~~~v~~v~~d~-~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i-dpl~~I~~i~~~~g~~lhvD~ 267 (486)
...|+ +++.||... .+....|.+.+|+++++. |..+.+.+.+..+-..|-. |++++|++||++||++++|.+
T Consensus 119 ~~AGl---~~~vV~~~~~~d~l~td~~~ie~~i~~~---G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNn 192 (389)
T PF05889_consen 119 ERAGL---EPVVVENVLEGDELITDLEAIEAKIEEL---GADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNN 192 (389)
T ss_dssp HHTT----EEEEE-EEEETTEEEEHHHHHHHHHHHH---CGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEG
T ss_pred HhcCC---eEEEeeccCCCCeeeccHHHHHHHHHHh---CCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEcc
Confidence 99999 999998532 234577899999998654 4456788888887778877 559999999999999999999
Q ss_pred cccchhcc-CccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccc
Q 038818 268 AYAGSACI-CPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQI 346 (486)
Q Consensus 268 a~g~~~~~-~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 346 (486)
|||.---. +....... ...++|.+.-+.-|-|.+|-|.+++...++..+...-...|+....
T Consensus 193 AYgvQ~~~~~~~i~~a~-~~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~vs~~YpGRas~---------------- 255 (389)
T PF05889_consen 193 AYGVQSSKCMHLIQQAW-RVGRVDAFVQSTDKNFMVPVGGAIMASFDPSGILAVSKEYPGRASA---------------- 255 (389)
T ss_dssp TTTTT-HHHHHHHHHHH-HHSTCSEEEEEHHHHHCEESSHEEEEESSHHHHHHHHHTSHSHBTS----------------
T ss_pred chhhhHHHHHHHHHHHH-hcCCcceeeeecCCCEEecCCCcEEEecCHHHHHHHHHHhhhhhhc----------------
Confidence 99762110 11111101 1247899999999999999999999888876554322222211110
Q ss_pred cCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC---CCeEEecCCC-eeEEEEEeecCCCCCCCCCCcc
Q 038818 347 TLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGD---NRFEIVAPRN-FAVVCFRVLPSASGLGDGKANE 422 (486)
Q Consensus 347 ~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~~~~~~~-~~~v~f~~~~~~~~~~~~~~~~ 422 (486)
...+-+...+..+|..|+...+....++-.++.++|++. -+-.+...|. .-.+.|....... ..
T Consensus 256 -----sp~ld~~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~-------~~ 323 (389)
T PF05889_consen 256 -----SPSLDLFITLLSLGCTGYGALLKERKASFPYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLYE-------IS 323 (389)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCT-------CC
T ss_pred -----ccchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccchh-------hc
Confidence 123556778888999999999999999999998888642 1444443333 2234444432210 01
Q ss_pred chHHHHHHHHHHHHhcCcE---EEeeeeECC--------EeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 423 GANELNRKLLESINASGQL---YVSHGMVAG--------IYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 423 ~~~~~~~~l~~~l~~~g~~---~~~~~~~~~--------~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
....-.|...|..+|+. .+.+..... ..+|-++- ....+++|||.+++.|+++++
T Consensus 324 --~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~As-aiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 324 --QKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAAS-AIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp --SSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE--TT--HHHHHHHHHHHHHHHH
T ss_pred --cchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHH-HhCCCHHHHHHHHHHHHHHhC
Confidence 11123556666665642 122211111 25777744 368899999999999999864
No 297
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.61 E-value=5.6e-13 Score=134.91 Aligned_cols=310 Identities=13% Similarity=0.061 Sum_probs=178.7
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCch
Q 038818 104 NWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHS 183 (486)
Q Consensus 104 ~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~ 183 (486)
.|...++...+.+.+.+++.+. +++++ ..++|+|+++++.. +..... ++..|++...++.
T Consensus 70 ~Y~p~~g~~~lr~aia~~~~~~-~~~~d-------~I~it~Ga~~al~~-l~~l~~-----------~gd~Vlv~~P~y~ 129 (402)
T TIGR03542 70 GYGPEQGYPFLREAIAENDYRG-RIDPE-------EIFISDGAKCDVFR-LQSLFG-----------SDNTVAVQDPVYP 129 (402)
T ss_pred CCCCCCCCHHHHHHHHHHHHhc-CCCHH-------HEEECCCcHHHHHH-HHHhcC-----------CCCEEEEeCCCCc
Confidence 3544455667777777665332 45544 78999998887754 322211 4566888888998
Q ss_pred HHHHHHHHcCC-C-------CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHH
Q 038818 184 ALQKAAQIAGI-D-------PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPL 252 (486)
Q Consensus 184 s~~~a~~~~G~-g-------~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I 252 (486)
.+...++..|+ | ..+++.+|.++.+.+..|.+.. ..+.+|+++.++||||.+-+ +++|
T Consensus 130 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-----------~~~~~i~l~nP~NPTG~~~s~~~~~~l 198 (402)
T TIGR03542 130 AYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPEE-----------PKIDIIYLCSPNNPTGTVLTKEQLKEL 198 (402)
T ss_pred chHHHHHHcCCccccccccccceEEEeecchhhCCCCCcccc-----------CCceEEEEeCCCCCCCccCCHHHHHHH
Confidence 88888888887 1 1256777876433344553210 12346777899999999966 8889
Q ss_pred HHHHHHhCceEEeeccccchhccCccchhhhcCCCCC---CceeeccccccC-CCCcceEEEeeCchHHHHHh-cCCccc
Q 038818 253 CDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGA---DSFSLNAHKWFF-TTLDCCCLWVKNPNALIKAL-STNPEF 327 (486)
Q Consensus 253 ~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~a---Dsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~-~~~~~y 327 (486)
+++|++||+++++|++|..+.. .+.....+..+... -.++.++.|.++ ....+|+++..++ ...... .....+
T Consensus 199 ~~~a~~~~~~iI~De~y~~~~~-~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~-l~~~~~~~~~~~~ 276 (402)
T TIGR03542 199 VDYANEHGSLILFDAAYSAFIS-DPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKE-LTYADGHSVIQDW 276 (402)
T ss_pred HHHHHHcCeEEEEEchhhhhcc-CCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecHH-HhhcchhhHHHHH
Confidence 9999999999999999976432 11111111122221 133567899997 4556888887543 210000 000000
Q ss_pred ccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEE
Q 038818 328 LRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFG---VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVV 404 (486)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v 404 (486)
..... .+. .....+...++...+. .+.+.+..+...+..+++.+.|++. ++++..+...+.+
T Consensus 277 ~~~~~-----------~~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~f~ 341 (402)
T TIGR03542 277 ERRQC-----------TKF---NGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA-GFKVYGGEHAPYL 341 (402)
T ss_pred HHHhh-----------hcc---cCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-CceecCCCceeEE
Confidence 00000 000 0012222223333332 2334555666777888899999886 6776543344556
Q ss_pred EEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 405 CFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 405 ~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
.+++.+.. + ..++.+.+. +.|+.+..+..+. +..++|+++.. +++++++.++.|+++
T Consensus 342 ~v~l~~~~------------~--~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~---~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 342 WVKTPEGI------------S--SWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFG---KRENIVEACERIKEA 401 (402)
T ss_pred EEECCCCC------------C--HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC---CHHHHHHHHHHHHhh
Confidence 66654310 1 234566665 4577544443332 35799999742 567899998888764
No 298
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.60 E-value=5.9e-13 Score=128.10 Aligned_cols=301 Identities=16% Similarity=0.119 Sum_probs=186.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCC-eEEEecCCCchHHHHHHHH
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISR-LVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~a~~~ 191 (486)
+...++.++|+++.+ ..+ ..+|++||+|||-.|+..||.+.. +..+ .+|.....-|-.-.-+...
T Consensus 84 ~~~~~la~~L~~~s~-~~d-------~vff~NSGaEA~EaAiKlARk~~~------~~~k~~Iia~~nsFHGRT~galS~ 149 (404)
T COG4992 84 EPQAELAEKLVELSP-FAD-------RVFFCNSGAEANEAALKLARKYTG------DPEKSKIIAFENSFHGRTLGALSA 149 (404)
T ss_pred hHHHHHHHHHHhhCc-ccc-------EEEEcCCcHHHHHHHHHHHHHHcC------CCCCcEEEEEcCCcCCccceeeec
Confidence 334456677888876 222 689999999999999999998753 0112 3343444444221111111
Q ss_pred c-------CCC--CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHHHHHH
Q 038818 192 A-------GID--PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCDIAKR 258 (486)
Q Consensus 192 ~-------G~g--~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~i~~~ 258 (486)
. +.+ ...++.+|.+ |+++|+++|++++. .|++.-..-..|.+-| ++++.++|++
T Consensus 150 t~~~ky~~~F~Pl~~g~~~vpfn-------Di~al~~ai~~~ta------AvivEPIQGEgGV~~~~~~fl~~lr~lCd~ 216 (404)
T COG4992 150 TGQPKYRKGFGPLLPGFRHVPFN-------DIEALEAAIDEDTA------AVIVEPIQGEGGVIPAPPEFLKALRELCDE 216 (404)
T ss_pred cCChhhccCCCCCCCCceecCCC-------CHHHHHHHhccCeE------EEEEecccCCCCCCCCCHHHHHHHHHHHHH
Confidence 1 111 1245666654 89999999998653 6888877777787744 8999999999
Q ss_pred hCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCc
Q 038818 259 YSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQV 338 (486)
Q Consensus 259 ~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~ 338 (486)
||+.|+.|+.+.|..--..-+.....++ .-|.++. -|.+++.++.|.++.+ +... ..+ .++-
T Consensus 217 ~g~LLI~DEVQtG~GRTGk~fA~e~~gV-~PDI~tl--aK~LgGG~PigA~la~-~~~~-~~~--~~G~----------- 278 (404)
T COG4992 217 HGALLILDEVQTGLGRTGKLFAYEHYGV-EPDILTL--AKALGGGFPIGAMLAT-EEIA-SAF--TPGD----------- 278 (404)
T ss_pred hCeEEEEeccccCCCccchHHHHHHhCC-CCCEEEe--eccccCCccceeeEEc-hhhh-hcC--CCCc-----------
Confidence 9999999999977532111111111122 4677665 6999988999999998 3221 111 1110
Q ss_pred cCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEecCC--CeeEEEEEeecCCCCC
Q 038818 339 VDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDN-RFEIVAPR--NFAVVCFRVLPSASGL 415 (486)
Q Consensus 339 ~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~--~~~~v~f~~~~~~~~~ 415 (486)
.+ .+-....|++.++...+..-.-++..++..+...+|.+.|+++. .+.++.+- ..-++.+.+.++.
T Consensus 279 -----Hg--STfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~--- 348 (404)
T COG4992 279 -----HG--STFGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPY--- 348 (404)
T ss_pred -----cc--CCCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCcc---
Confidence 00 01112455555554444222233566777778888888887652 22233222 2345556655431
Q ss_pred CCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 416 GDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 416 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
....+.+.+.++|.+.... +..++|+.. ....+++|||..+++|+++++.+..
T Consensus 349 -----------~a~~~~~~~~~~gvL~~~a----~~~ViR~~P-pL~i~~eei~~~~~~l~~~l~~~~~ 401 (404)
T COG4992 349 -----------RARDIVRALREEGVLVLPA----GPNVIRFLP-PLVITEEEIDEALDALERALAAASA 401 (404)
T ss_pred -----------cHHHHHHHHHHCCeEEecC----CCCeEEecC-CccCCHHHHHHHHHHHHHHHHHhhh
Confidence 2356677788889754432 345899987 5688999999999999999886653
No 299
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.60 E-value=4.8e-12 Score=129.10 Aligned_cols=316 Identities=12% Similarity=0.040 Sum_probs=180.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
...+.++.+.|++++.-..+ ..+|+++||+||..|+.+||... | ++.+|......|-+..-+...
T Consensus 85 ~~~~~~la~~L~~~~~~~~~-------~v~f~~SGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~~s~ 149 (433)
T PRK08117 85 YESILKLAEELAEITPGGLD-------CFFFSNSGAEAIEGALKLAKHVT-------K-RPYIISFTGCFHGRTLGALSV 149 (433)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCcHHHHHHHHHHHHHHhc-------C-CCeEEEECCCcCCcCHHHHhh
Confidence 34555666778887731111 57889999999999999998752 1 334555566667665444333
Q ss_pred cCC--------C--CCCeEEEecCCCCCcc------------cCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC-
Q 038818 192 AGI--------D--PKNFRAIKTTKSSSFT------------LTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP- 248 (486)
Q Consensus 192 ~G~--------g--~~~v~~v~~d~~~~~~------------~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp- 248 (486)
.+- + ...+..+|... .++ -|+++|++.++.... +..+.+|++.......|.+-|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~aavi~Epi~~~~G~~~~~ 226 (433)
T PRK08117 150 TTSKSKYRKYYQPLLGSVYQAPYPY--CDRCPKGEDPEVCFLECLRDLESLFKHQVT-PEEVAAVIIEPVLGEGGYIVPP 226 (433)
T ss_pred cCCCccccccCCCCCCCcEEeCCCc--cccccccCchhHHHHHHHHHHHHHHHhccC-CCcEEEEEECCeeCCCCCccCC
Confidence 221 0 11344555431 111 256777777764211 234567888877788898888
Q ss_pred ---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCc
Q 038818 249 ---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNP 325 (486)
Q Consensus 249 ---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~ 325 (486)
+++|.++|++||+++++|.+|.|+......+.....++ ..|. ....|.++..+++|.++.+++ .. +.+...
T Consensus 227 ~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv-~pDi--~t~sK~lg~G~pigav~~~~~-i~-~~~~~~- 300 (433)
T PRK08117 227 KSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGV-VPDI--MTIAKGIASGLPLSAVVASKE-LM-EQWPLG- 300 (433)
T ss_pred HHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCC-CCCE--eehhhhccCCCcceeEEEcHH-HH-hhccCC-
Confidence 99999999999999999999986322111111001122 2455 456899987677888877643 22 222110
Q ss_pred ccccCccCCCCCccCCCCccccCCCCCCchHHHH---HHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEecC-CC
Q 038818 326 EFLRNKASDSKQVVDYKDWQITLSRRFRALKLWL---VLRSFGVANLRNFLRSHVRMAQLFQELVGGDN-RFEIVAP-RN 400 (486)
Q Consensus 326 ~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~-~~ 400 (486)
... .+. ...++.+.+ +++.+..+ ++.++..++.+++++.|+++. .+.++.. +.
T Consensus 301 --~~~-------------~T~----~~np~~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg 358 (433)
T PRK08117 301 --SHG-------------TTF----GGNPVACAAALATLEVIKEE---KLLDNANEMGAYALERLEVLKEKHPVIGDVRG 358 (433)
T ss_pred --CCC-------------CCC----CcCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCceeeeec
Confidence 000 011 112333333 34433222 455666777777777776531 1111111 11
Q ss_pred -eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 401 -FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 401 -~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
..++.+.+.++.. .. .......+.+.+.+.|+++.... ....++|+++. ...|+++|+++++.|.+++
T Consensus 359 ~Gl~~gi~~~~~~~-------~~-~~~~~~~~~~~l~~~Gv~~~~~g--~~~~~lRl~p~-~~~t~~~i~~~~~~l~~~l 427 (433)
T PRK08117 359 IGLMIGIEIVDPDG-------EP-DGDAVEKILDKCLEKGLLFYLCG--NAGNVLRMIPP-LTVTKEEIDEGLDILDEAL 427 (433)
T ss_pred CCcEEEEEEecCCC-------Cc-chHHHHHHHHHHHHCCCEEeecC--CCCCEEEEeCC-ccCCHHHHHHHHHHHHHHH
Confidence 1233444432210 00 02345567788888898543321 12468999973 5678889999999999998
Q ss_pred HHHhh
Q 038818 480 DGILA 484 (486)
Q Consensus 480 ~~l~~ 484 (486)
+++.+
T Consensus 428 ~~~~~ 432 (433)
T PRK08117 428 TEYEA 432 (433)
T ss_pred HHHhc
Confidence 87754
No 300
>PLN02397 aspartate transaminase
Probab=99.59 E-value=1.5e-12 Score=132.31 Aligned_cols=322 Identities=11% Similarity=0.037 Sum_probs=188.7
Q ss_pred HHHHHHHhhcCCC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcce--EEcCCchHH--HHHHHHHHHHHHHH
Q 038818 89 FLGEMLSSGFNVV-GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGG--VIQGTTCEA--ILCTLAAARDQILN 163 (486)
Q Consensus 89 ~~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~--~~t~ggt~a--~~~al~~a~~~~~~ 163 (486)
.+.+.+...++.+ ...|....+..++.+.+.+|+.+..+.+... ... .-+.+|+.+ ...++.....
T Consensus 70 ~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~-----~~i~~~~i~~g~Ga~~l~~~~~~~~~---- 140 (423)
T PLN02397 70 VVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKE-----NRVATVQCLSGTGSLRLGAEFLARFY---- 140 (423)
T ss_pred HHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhc-----CeeEeeecccchHHHHHHHHHHHHhC----
Confidence 3444433332323 2357777778888888888885543221100 011 113333323 3333333221
Q ss_pred HccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccc
Q 038818 164 EIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAI 243 (486)
Q Consensus 164 ~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~ 243 (486)
+++.|+++++++......++..|. +++.+|....+++.+|++.+++.+.... ....+++.+.++|||
T Consensus 141 -------pGd~Vlv~~P~y~~y~~~~~~~g~---~~~~v~l~~~~~~~~d~~~l~~~l~~~~---~~~~~i~~~~P~NPT 207 (423)
T PLN02397 141 -------PGSTIYIPNPTWGNHHNIFRDAGV---PVRTYRYYDPKTRGLDFDGLLEDLKAAP---DGSFVLLHACAHNPT 207 (423)
T ss_pred -------CCCEEEEeCCCchhHHHHHHHcCC---eEEEeecccCcCCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCC
Confidence 667899999999999999999999 9999998322247899999998886431 124678888899999
Q ss_pred cccC---CchHHHHHHHHhCceEEeeccccchhccCc--cchh--hhcCCCCCCce-eeccccccCC-CCcceEEE--ee
Q 038818 244 TTVD---PLGPLCDIAKRYSIWVHVDAAYAGSACICP--EFRH--FIDGIEGADSF-SLNAHKWFFT-TLDCCCLW--VK 312 (486)
Q Consensus 244 G~id---pl~~I~~i~~~~g~~lhvD~a~g~~~~~~~--~~~~--~~~~~~~aDsi-~~~~hK~l~~-p~~~g~~~--~~ 312 (486)
|.+- .+++|+++|++||+|+++|.+|........ .... .+... .-..| ..++.|.++. ..-+|+++ ..
T Consensus 208 G~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~-~~~vI~~~SfSK~~~~~G~RvG~~v~~~~ 286 (423)
T PLN02397 208 GVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVED-GHEILVAQSYAKNMGLYGERVGALSVVCK 286 (423)
T ss_pred CCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhc-CCcEEEEEECcccCCCccccceEEEEEeC
Confidence 9984 477889999999999999999977543110 0111 11111 11234 5578999984 56788875 33
Q ss_pred CchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhch--------HHHHHHHHHHHHHHHHHH
Q 038818 313 NPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGV--------ANLRNFLRSHVRMAQLFQ 384 (486)
Q Consensus 313 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~--------~g~~~~~~~~~~~a~~l~ 384 (486)
+++.+............. ...+ ...+..+++...+.. +.++++.++..+.++.+.
T Consensus 287 ~~~~~~~~~~~~~~~~~~--------------~~~~---~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~ 349 (423)
T PLN02397 287 SADVAVRVKSQLKLIARP--------------MYSN---PPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLY 349 (423)
T ss_pred CHHHHHHHHHHHHHHHhc--------------ccCC---CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 433222111000000000 0000 112233333333322 125667778888999999
Q ss_pred HHHhCCCC----eEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeECCEeEEEEEec
Q 038818 385 ELVGGDNR----FEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVAGIYFIRFAVG 459 (486)
Q Consensus 385 ~~L~~~~~----~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~~~~~lR~~~~ 459 (486)
+.|+++ + +++. .|+.+++.|--.+ .+ +.++|. +.|+. +.+ .+ |+++.
T Consensus 350 ~~L~~~-~~~~~~~~~-~p~gg~fl~~~l~--------------~~----~~~~Ll~~~~V~-v~~-----~~--Ri~~~ 401 (423)
T PLN02397 350 DALEAR-GSPGDWSHI-TKQIGMFSFTGLN--------------KE----QVDRMTKEYHIY-MTR-----DG--RISMA 401 (423)
T ss_pred HHHHhc-CCCCCCCcc-cCCceEEEecCCC--------------HH----HHHHHHHhCCEE-ECC-----CC--eEEEe
Confidence 999887 4 5543 4555666553211 22 344444 34654 331 11 99985
Q ss_pred CCCCcHHHHHHHHHHHHHHHH
Q 038818 460 ATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 460 ~~~tt~~did~~i~~l~~~~~ 480 (486)
..++++++++++.|+++++
T Consensus 402 --~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 402 --GLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred --eCCHHHHHHHHHHHHHHHh
Confidence 3577799999999999875
No 301
>PRK08354 putative aminotransferase; Provisional
Probab=99.59 E-value=5.7e-13 Score=130.06 Aligned_cols=149 Identities=13% Similarity=-0.010 Sum_probs=106.6
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDP 196 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~ 196 (486)
.+++++++.+|. .+++|+|+++++...+... . +++.|++..++|+.+..+++..|+
T Consensus 44 ~l~~~ia~~~~~----------~I~vt~G~~~al~~~~~~~-~-----------~gd~vlv~~P~y~~~~~~~~~~g~-- 99 (311)
T PRK08354 44 WLEEEFSKLFGE----------PIVITAGITEALYLIGILA-L-----------RDRKVIIPRHTYGEYERVARFFAA-- 99 (311)
T ss_pred HHHHHHHHHHCC----------CEEECCCHHHHHHHHHHhh-C-----------CCCeEEEeCCCcHHHHHHHHHcCC--
Confidence 356778888772 5789999999876544221 1 466788899999999999999999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHHHhCceEEeeccccchh
Q 038818 197 KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAKRYSIWVHVDAAYAGSA 273 (486)
Q Consensus 197 ~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~~~g~~lhvD~a~g~~~ 273 (486)
+++.+ .+|++.|++++++ +.+++++.++||||.+-+ +++|.++|+++|+|+++|++|..+.
T Consensus 100 -~~~~~--------~~d~~~l~~~~~~-------~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~ 163 (311)
T PRK08354 100 -RIIKG--------PNDPEKLEELVER-------NSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFV 163 (311)
T ss_pred -EEeec--------CCCHHHHHHhhcC-------CCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhcc
Confidence 77654 3578888887652 125778889999999865 6677788899999999999997654
Q ss_pred ccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEe
Q 038818 274 CICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWV 311 (486)
Q Consensus 274 ~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~ 311 (486)
... . . .. ..--.+..++.|.++.| .-+|+++.
T Consensus 164 ~~~-~--~-~~--~~~vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 164 KKP-E--S-PE--GENIIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred ccc-c--c-cC--CCcEEEEeccHhhcCCccceeeeeee
Confidence 311 1 0 00 11124456689999844 56787776
No 302
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.59 E-value=8.5e-13 Score=130.25 Aligned_cols=278 Identities=13% Similarity=0.031 Sum_probs=173.6
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCC
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGID 195 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g 195 (486)
.++++++++.+|.+.. ...++|+|+++++. .+..+.. ++. |++...++.....+++..|.
T Consensus 56 ~~L~~~ia~~~~~~~~------~~I~i~~Gs~e~i~-~l~~~~~-----------~g~-v~v~~P~y~~y~~~~~~~g~- 115 (339)
T PRK06959 56 DGLAACAARYYGAPDA------AHVLPVAGSQAAIR-ALPALLP-----------RGR-VGIAPLAYSEYAPAFARHGH- 115 (339)
T ss_pred HHHHHHHHHHhCCCCc------ccEEECcCHHHHHH-HHHHhcC-----------CCe-EEEcCCCcHHHHHHHHHCCC-
Confidence 5677889999999742 16888999888764 3322211 444 55677888889999999999
Q ss_pred CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHH---HHHhCceEEeeccccch
Q 038818 196 PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDI---AKRYSIWVHVDAAYAGS 272 (486)
Q Consensus 196 ~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i---~~~~g~~lhvD~a~g~~ 272 (486)
+++.+|.+. +.+.+ .. .+++++.++||||.+-+.+++.++ |++++.++++|.+|..+
T Consensus 116 --~~~~v~~~~--------~~~~~----~~------~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~ 175 (339)
T PRK06959 116 --RVVPLDEAA--------DTLPA----AL------THLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADT 175 (339)
T ss_pred --EEEeecccc--------hhccc----cC------CEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccC
Confidence 888887652 12211 11 257888899999999776655554 66789999999999764
Q ss_pred hccCccchhhhcCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC
Q 038818 273 ACICPEFRHFIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR 351 (486)
Q Consensus 273 ~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~ 351 (486)
.. .+...... ..++ -.+.-++.|.++ ...-+|+++.. ++..........++.
T Consensus 176 ~~-~~s~~~~~-~~~~-vi~l~SfSK~~gl~GlRiGy~v~~-~~li~~l~~~~~~~~----------------------- 228 (339)
T PRK06959 176 LP-AASLAAHT-DRPG-LVVLRSVGKFFGLAGVRAGFVLAA-PALLAALRDALGAWT----------------------- 228 (339)
T ss_pred CC-cccchhcc-CCCC-EEEEecChhhcCCcchheEEEecC-HHHHHHHHHhcCCCC-----------------------
Confidence 31 11111111 1111 145667899998 44567887764 444332222111110
Q ss_pred CCchHHHHHHHHhch-HHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHH
Q 038818 352 FRALKLWLVLRSFGV-ANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRK 430 (486)
Q Consensus 352 ~~~l~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 430 (486)
...+...++...+.. +..++..++..+.++++.+.|+++ ++++. +..+.+.++.. . ...
T Consensus 229 vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~--~~~~f~~~~~~-~----------------~~~ 288 (339)
T PRK06959 229 VSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAH-GFAVH--ATPLFSWTDDP-R----------------AAA 288 (339)
T ss_pred CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCCcc--CcceEEEEeCC-C----------------HHH
Confidence 122333344444422 345566677777888999999887 67654 22222233321 1 245
Q ss_pred HHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhhcC
Q 038818 431 LLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILATS 486 (486)
Q Consensus 431 l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~~~ 486 (486)
+.+.|.++|+.+ .. +....++|+++. .+.++.++++++|+++.+.|.+.|
T Consensus 289 l~~~l~~~GI~v-r~--~~~~~~lRisi~---~~~~e~~~l~~al~~~~~~~~~~~ 338 (339)
T PRK06959 289 LHAALARRGIWT-RY--FAPPPSVRFGLP---ADEAEWQRLEDALAECVPTLAAAS 338 (339)
T ss_pred HHHHHHhCCeEE-EE--CCCCCeEEEECC---CCHHHHHHHHHHHHHHHHHHhhcc
Confidence 677788889754 32 233458999973 255699999999999998877543
No 303
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.59 E-value=1.4e-12 Score=130.81 Aligned_cols=278 Identities=13% Similarity=0.080 Sum_probs=157.4
Q ss_pred ceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCC------CeEEEecCCCCCccc
Q 038818 139 GGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPK------NFRAIKTTKSSSFTL 212 (486)
Q Consensus 139 ~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~------~v~~v~~d~~~~~~~ 212 (486)
-.++++|||+||..|+..+|... + ++.+|......|-+...++...|.... .+..++.. . ..
T Consensus 86 ~~~~~~SGseA~~~Al~~ar~~~-------~-~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~ 153 (375)
T PRK04260 86 LAFFCNSGAEANEAAIKIARKAT-------G-KQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA---I-FN 153 (375)
T ss_pred EEEEcCccHHHHHHHHHHHHHhc-------C-CCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe---C-CC
Confidence 36899999999999999997641 0 334555566778776666655443100 01111110 0 24
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCC
Q 038818 213 TPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEG 288 (486)
Q Consensus 213 d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~ 288 (486)
|+++|++.+++. ..+|++....+++|.+.| +++|.++|+++|+++++|++|.++..-...+.....++ .
T Consensus 154 dl~~l~~~l~~~------~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~-~ 226 (375)
T PRK04260 154 DLNSVKALVNKN------TAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGI-E 226 (375)
T ss_pred CHHHHHHhcCCC------eEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCC-C
Confidence 899999887532 346788888888888754 89999999999999999999976322111111111223 3
Q ss_pred CCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHH
Q 038818 289 ADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVAN 368 (486)
Q Consensus 289 aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g 368 (486)
-|.+ +..|.++..+..|.++.+++ . .+.+... .+. .+. .+.......+..++..+..+.
T Consensus 227 pdi~--t~sK~l~~G~~ig~~~~~~~-~-~~~~~~~-~~~---------------~t~-~~~~~~~~aa~a~l~~~~~~~ 285 (375)
T PRK04260 227 PDIF--TLAKGLANGVPVGAMLAKSS-L-GGAFGYG-SHG---------------STF-GGNKLSMAAASATLDIMLTAG 285 (375)
T ss_pred CCEE--EecccccCCcceEEEEEcHH-H-HhhcCCC-CCC---------------CCC-CcCHHHHHHHHHHHHHHHhhH
Confidence 5644 56899886567898888754 2 2222110 000 011 011112223333343332222
Q ss_pred -HHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeee
Q 038818 369 -LRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGM 447 (486)
Q Consensus 369 -~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~ 447 (486)
.++..+....+.+.+.+.+.+.+.+.-+. .....+.+.+... ..++.+++.++|+.+. +.
T Consensus 286 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~g~~~~~~~~~~----------------~~~~~~~l~~~Gi~v~-~~- 346 (375)
T PRK04260 286 FLEQALENGNYLQEQLQKALQDKETVTTVR-GLGYMIGIETTAD----------------LSQLVEAARDKGLIVL-TA- 346 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeeEEe-ccceEEEEEecCc----------------HHHHHHHHHhCCCEEe-cC-
Confidence 22333333334444444444443322221 1334445554211 2467777888898543 22
Q ss_pred ECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 448 VAGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 448 ~~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
+...+|+++. ...+++||+++++.|+++
T Consensus 347 --~~~~lR~~~~-~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 347 --GTNVIRLLPP-LTLTKEEIEQGIAILSEV 374 (375)
T ss_pred --CCCEEEEcCC-CccCHHHHHHHHHHHHHh
Confidence 3467999984 466788999999999875
No 304
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.58 E-value=7.7e-13 Score=129.48 Aligned_cols=288 Identities=21% Similarity=0.238 Sum_probs=189.5
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH--
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA-- 184 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-- 184 (486)
..|....+|+. ++.|=|.+ .++.+++|..|+..++..... +++.|+++...+..
T Consensus 61 ~nPT~~~lE~~----~a~LEg~~---------~~~afsSGmaAI~~~~l~ll~-----------~GD~vl~~~~~YG~t~ 116 (396)
T COG0626 61 GNPTRDALEEA----LAELEGGE---------DAFAFSSGMAAISTALLALLK-----------AGDHVLLPDDLYGGTY 116 (396)
T ss_pred CCccHHHHHHH----HHHhhCCC---------cEEEecCcHHHHHHHHHHhcC-----------CCCEEEecCCccchHH
Confidence 35555666654 56665543 568888888777666555443 46667777666544
Q ss_pred --HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHH-HHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCc
Q 038818 185 --LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDL-DIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSI 261 (486)
Q Consensus 185 --~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~-~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~ 261 (486)
+.+..+..|+ ++.+++. .|.+++++++.+ ++ .+|.+..++||+..+.||++|+++|+++|+
T Consensus 117 ~~~~~~l~~~gi---~~~~~d~-------~~~~~~~~~~~~~~t------k~v~lEtPsNP~l~v~DI~~i~~~A~~~g~ 180 (396)
T COG0626 117 RLFEKILQKFGV---EVTFVDP-------GDDEALEAAIKEPNT------KLVFLETPSNPLLEVPDIPAIARLAKAYGA 180 (396)
T ss_pred HHHHHHHHhcCe---EEEEECC-------CChHHHHHHhcccCc------eEEEEeCCCCcccccccHHHHHHHHHhcCC
Confidence 3444556677 7777653 255566666663 44 489999999999999999999999999999
Q ss_pred eEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCcc
Q 038818 262 WVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVV 339 (486)
Q Consensus 262 ~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~ 339 (486)
.++||.+++.+.+.-| +. -+||.+.-+..|++++.-. .|+++.+++......+.....++
T Consensus 181 ~vvVDNTfatP~~q~P-L~------~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~----------- 242 (396)
T COG0626 181 LVVVDNTFATPVLQRP-LE------LGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANT----------- 242 (396)
T ss_pred EEEEECCcccccccCh-hh------cCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhc-----------
Confidence 9999999988765443 11 1799999999999997643 55555555544332111110111
Q ss_pred CCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe-cCC----------------Cee
Q 038818 340 DYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIV-APR----------------NFA 402 (486)
Q Consensus 340 ~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~----------------~~~ 402 (486)
+--.....+|+.++ |.+-+.-++++..++|..+.+.|+++|.++-+ .|. ..+
T Consensus 243 ---------G~~l~p~dA~l~lR--GlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg 311 (396)
T COG0626 243 ---------GAVLSPFDAWLLLR--GLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGG 311 (396)
T ss_pred ---------CCCCCHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCce
Confidence 11234556688777 66888899999999999999999999988644 331 357
Q ss_pred EEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhc------CcE--EEeee---eE----------C--CEeEEEEEec
Q 038818 403 VVCFRVLPSASGLGDGKANEGANELNRKLLESINAS------GQL--YVSHG---MV----------A--GIYFIRFAVG 459 (486)
Q Consensus 403 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------g~~--~~~~~---~~----------~--~~~~lR~~~~ 459 (486)
+++|.+... +...++.+.|.-- |-+ .+.+. .. . ..+.+|++++
T Consensus 312 ~~Sf~l~~~--------------~~~~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVG 377 (396)
T COG0626 312 LFSFELKNE--------------EAAKKFLDSLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVG 377 (396)
T ss_pred EEEEEeCCh--------------HHHHHHHHhCCccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEec
Confidence 889988741 2234455543110 110 11111 00 0 2568999995
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHH
Q 038818 460 ATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 460 ~~~tt~~did~~i~~l~~~~~~l 482 (486)
- ||++.+++.|++.++.+
T Consensus 378 l-----Ed~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 378 L-----EDVEDLIADLEQALAKA 395 (396)
T ss_pred C-----CCHHHHHHHHHHHHHhh
Confidence 3 37888888888877654
No 305
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.58 E-value=4.4e-12 Score=130.62 Aligned_cols=332 Identities=14% Similarity=0.079 Sum_probs=183.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
+..+.++.+.|.+++.-... ...+|+++||+||..|+.+||..... .|..+ ++.+|......|-+..-++..
T Consensus 132 ~~~~~~lae~L~~~~~~~~~------~~v~f~~SGsEA~e~AlKlAr~~~~~-~g~~~-r~~iI~~~~~yHG~t~~a~sl 203 (504)
T PLN02760 132 TKPSLDLAKELLEMFTARKM------GKVFFTNSGSEANDTQVKLVWYYNNA-LGRPN-KKKFIARSKSYHGSTLISASL 203 (504)
T ss_pred cHHHHHHHHHHHhhcCCCCC------CEEEEeCChHHHHHHHHHHHHHHHHh-cCCCC-CcEEEEECCCccCChHhhhhc
Confidence 44455566777777532111 15788999999999999999865311 11111 345666676778776555554
Q ss_pred cCCC---------CCCeEEEecCCCCCcc-------------cCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC-
Q 038818 192 AGID---------PKNFRAIKTTKSSSFT-------------LTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP- 248 (486)
Q Consensus 192 ~G~g---------~~~v~~v~~d~~~~~~-------------~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp- 248 (486)
.|.. ...+..++.+. .++ ...++|++++... ....+.+|++.......|.+-|
T Consensus 204 sg~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAAvI~EPv~g~gG~~~p~ 279 (504)
T PLN02760 204 SGLPALHQKFDLPAPFVLHTDCPH--YWRFHLPGETEEEFSTRLADNLENLILKE--GPETIAAFIAEPVMGAGGVIPPP 279 (504)
T ss_pred cCChhhccCCCCCCCCcEEeCCCc--ccccCCCCCcHHHHHHHHHHHHHHHHHhc--CCCceEEEEECCccCCCCCcCCC
Confidence 4431 11122333211 011 1124577666431 1234567787777777788888
Q ss_pred ---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcCC
Q 038818 249 ---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALSTN 324 (486)
Q Consensus 249 ---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~~ 324 (486)
+++|.++|++||++|++|+++.|+.....-+.....++ ..|.+++ -|.++..+ +.|.++++++ . .+.+...
T Consensus 280 ~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv-~PDivtl--gK~lggG~~PigAv~~~~~-i-~d~~~~~ 354 (504)
T PLN02760 280 ATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNI-KPDLVSL--AKALSSAYMPIGAVLVSPE-I-SDVIHSQ 354 (504)
T ss_pred HHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCC-CCcEEEe--cccccCCccccceEeecHH-H-Hhhhhcc
Confidence 99999999999999999999966533222222112244 4787665 68887653 5777777643 2 2233211
Q ss_pred cccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC--CCee
Q 038818 325 PEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP--RNFA 402 (486)
Q Consensus 325 ~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~ 402 (486)
.+.... +....+-....+.+.+++..+..-.-+++.++..++.++|++.|+++....++.. -...
T Consensus 355 ~~~~~~-------------~~h~~T~~gnPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl 421 (504)
T PLN02760 355 SNKLGS-------------FAHGFTYSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGL 421 (504)
T ss_pred cccccC-------------cccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCce
Confidence 000000 0000111123344444444331111124677888888888888876532222211 1123
Q ss_pred EEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 403 VVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 403 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
++.+.+....... + .......+...+.+.+.++|++... .+ ..+|++. ....|++|||+++++++++++.+
T Consensus 422 ~~gie~~~~~~~~-~--~~~~~~~~~~~i~~~~~~~Gvl~~~----~g-~~lrl~P-pl~it~eeid~~~~~l~~al~~~ 492 (504)
T PLN02760 422 ILGTEFVDNKSPN-D--PFPAEWGVGAYFGAECKKRGMLVRV----AG-DNIMMSP-PLIITPEEVDELISIYGKALKAT 492 (504)
T ss_pred EEEEEEecCCccc-c--cccchhHHHHHHHHHHHhCCcEEEe----cC-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHHH
Confidence 4555553321000 0 0001123456778888899985432 12 3588886 34678889999999999988765
No 306
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.57 E-value=1e-11 Score=125.75 Aligned_cols=303 Identities=11% Similarity=0.027 Sum_probs=178.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.....++.+.|++++..+.. ..+|+++|||||-.|+..||....++ | +..+|......|-...-+...
T Consensus 116 ~~~~~~lAe~L~~~~p~~~~-------~v~f~~SGsEA~e~AlklAr~~t~~~----g-r~~ii~~~~~yHG~t~~~ls~ 183 (442)
T TIGR03372 116 DPLRALLAKTLAALTPGKLK-------YSFFCNSGTESVEAALKLAKAYQSPR----G-KFTFIAASGAFHGKSLGALSA 183 (442)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCCchHHHHHHHHHHHHHHhhc----C-CcEEEEECCCccCCCHHHhhc
Confidence 44455667778887643222 57899999999999999999763211 1 223444444455443333333
Q ss_pred cCCC---------CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHHHHHH
Q 038818 192 AGID---------PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCDIAKR 258 (486)
Q Consensus 192 ~G~g---------~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~i~~~ 258 (486)
.|-. ...+..+|.+ |.+.+++.++.....+..+.+|++.......|.+-| +++|.++|++
T Consensus 184 t~~~~~~~~~~p~~~~~~~~p~~-------d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~ 256 (442)
T TIGR03372 184 TAKPAFRKPFMPLLPGFHHVAFG-------DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDE 256 (442)
T ss_pred cCCcccCCCCCCCCCCCEEeCCC-------CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHH
Confidence 2210 1123444432 678888888654444455677888877777888888 9999999999
Q ss_pred hCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCCCCC
Q 038818 259 YSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQ 337 (486)
Q Consensus 259 ~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 337 (486)
||+.+++|+++.|+.....-+.....++ ..|.++ ..|.++.. +++|.++.+++ .. +.+.. .++...
T Consensus 257 ~g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDivt--~gK~lg~G~~Pigavv~~~~-i~-~~~~~-~~~~~~------- 323 (442)
T TIGR03372 257 FGALLILDEVQTGMGRTGKMFACEHEGV-QPDILC--LAKALGGGVMPIGATIATEA-VF-SVLFD-NPFLHT------- 323 (442)
T ss_pred cCCEEEEeecccCCCccccchhhhhcCC-CCCeee--ehhhhcCCcccceEEEecHH-HH-Hhhhc-cCcccc-------
Confidence 9999999999966422111111111233 478777 47988865 46788887643 22 22311 111111
Q ss_pred ccCCCCccccCCCCCCchHHHH---HHHHhchHHHHHHHHHHHHHHHHHHHHHhCC----C-Ce-EEecCCCeeEEEEEe
Q 038818 338 VVDYKDWQITLSRRFRALKLWL---VLRSFGVANLRNFLRSHVRMAQLFQELVGGD----N-RF-EIVAPRNFAVVCFRV 408 (486)
Q Consensus 338 ~~~~~~~~~~~sr~~~~l~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~-~~-~~~~~~~~~~v~f~~ 408 (486)
.+-....+.+.+ +++.+-.+ ++.++..++.++|++.|+++ | .+ ++- -...++.+.+
T Consensus 324 ----------~T~~gnp~~~Aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vR--G~Gl~~giel 388 (442)
T TIGR03372 324 ----------TTFGGNPLACAAALATINELLEK---NLPAQAAIKGDFLLDGFQQLAAEYPDLIIEAR--GKGLLMAIEF 388 (442)
T ss_pred ----------CCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHhCCCceEEEe--cceEEEEEEe
Confidence 011123333333 44444333 34556667777777777553 3 11 121 2234555555
Q ss_pred ecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 409 LPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
.. +.....+.+.+.++|++. .+.. .+...+|+.. ....|++|||+++++|++.
T Consensus 389 ~~--------------~~~~~~i~~~l~~~Gvl~-~~~~-~~~~~lr~~P-pl~~t~~~id~~~~~l~~~ 441 (442)
T TIGR03372 389 RD--------------NEIGYAFAKELFQQNILV-AGTL-NNAKSIRIEP-PLTITIEQCALVIKAAKDA 441 (442)
T ss_pred CC--------------hHHHHHHHHHHHHCCcEE-eecC-CCCCEEEEEC-CcccCHHHHHHHHHHHHHh
Confidence 43 223456788888889753 3221 1235799988 4577888999999999875
No 307
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.57 E-value=1e-12 Score=130.43 Aligned_cols=329 Identities=16% Similarity=0.134 Sum_probs=207.8
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHH
Q 038818 106 MSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSAL 185 (486)
Q Consensus 106 ~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 185 (486)
++..+..++-.++.+||+++.|++.- .+-.++|..+-..+|.+.|..+..+ |.. .+-+.+++-.+|-..
T Consensus 575 eQaqGY~~lf~~Le~~Lc~iTG~D~~--------s~QPNsGA~GEYaGL~~IRaY~~~k-ge~--hRnvClIPvSAHGTN 643 (1001)
T KOG2040|consen 575 EQAQGYQQLFTELEKDLCEITGFDSF--------SLQPNSGAQGEYAGLRVIRAYLESK-GEG--HRNVCLIPVSAHGTN 643 (1001)
T ss_pred HHHhhHHHHHHHHHHHhheeecccce--------eecCCCCcccchhhHHHHHHHHHhc-cCC--cceeEEEeecccCCC
Confidence 45666788888899999999999742 1223455556667777777654332 222 567788888899999
Q ss_pred HHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC-CchHHHHHHHHhCceEE
Q 038818 186 QKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD-PLGPLCDIAKRYSIWVH 264 (486)
Q Consensus 186 ~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id-pl~~I~~i~~~~g~~lh 264 (486)
...+.+.|+ +|+.|.++. +|.+|+.+|++.-++...+ -..+.+|.++| .|.++ .|++++++.+++|=-+.
T Consensus 644 PASA~Magm---kvvpV~~~~--~G~id~~dLk~kaekh~~~---Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVY 714 (1001)
T KOG2040|consen 644 PASAAMAGM---KVVPVGCDA--NGNIDMVDLKAKAEKHKDN---LAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVY 714 (1001)
T ss_pred hhhHHhcCC---EEEEeeccC--CCCccHHHHHHHHHHhhhh---hheeEEecccc-cccccccHHHHHHHHHhcCCEEE
Confidence 999999999 999998886 6799999999988776543 34677888887 47775 59999999999999999
Q ss_pred eeccccch-hccCccchhhhcCCCCCCceeeccccccCCCCcce-----EEEeeCchHHHHHhcCCcccccCccCCCC-C
Q 038818 265 VDAAYAGS-ACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCC-----CLWVKNPNALIKALSTNPEFLRNKASDSK-Q 337 (486)
Q Consensus 265 vD~a~g~~-~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g-----~~~~~~~~~~~~~~~~~~~y~~~~~~~~~-~ 337 (486)
.|||.--. +.++.. |--++|....+.||+|..|.|.| .+.++.. + ++|+-...-.+. .
T Consensus 715 lDGANMNAqVGlc~p------Gd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~H--L-------apfLP~HpVvs~~~ 779 (1001)
T KOG2040|consen 715 LDGANMNAQVGLCRP------GDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--L-------APFLPSHPVVSPGR 779 (1001)
T ss_pred ecCCCccceecccCC------ccccccceeecccceeeecCCCCCCCCCccchhhh--c-------cccCCCCCccCCCC
Confidence 99986322 122211 11289999999999998776544 4444432 1 233321110000 0
Q ss_pred ccCCCCccccCCCCC---Cch-HHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEE----EEEee
Q 038818 338 VVDYKDWQITLSRRF---RAL-KLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVV----CFRVL 409 (486)
Q Consensus 338 ~~~~~~~~~~~sr~~---~~l-~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v----~f~~~ 409 (486)
..+-...+.-.+.++ ..| --|++++.+|..|+.+.-+-.+-+|+|+.++|+.+ .+++....-+.| .....
T Consensus 780 ~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h--Ykil~~~~~~~vaHEFIlD~r 857 (1001)
T KOG2040|consen 780 PEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH--YKILFRGENGLVAHEFILDLR 857 (1001)
T ss_pred CCCCCCccceeccCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc--cceeEecCCcceeeeeeeech
Confidence 000000111111111 223 34999999999999999999999999999999986 455433222222 22222
Q ss_pred cCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeee-ECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 410 PSASGLGDGKANEGANELNRKLLESINASGQLYVSHGM-VAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
+... .. ..+ .-.+.++|..-|. -.|+. |.-.+.+-+-.+ ..-+.+++|++++++..+-+++.
T Consensus 858 ~fK~--~a---gie----avDvAKRL~DYgF--HaPTmswPV~gtLMIEPT-ESE~k~ElDRfcdAliSIreEI~ 920 (1001)
T KOG2040|consen 858 PFKK--TA---GIE----AVDVAKRLMDYGF--HAPTMSWPVAGTLMIEPT-ESEDKAELDRFCDALISIREEIA 920 (1001)
T ss_pred hhcc--cc---CCc----HHHHHHHHHhccC--CCCccccccCCceEeccC-ccccHHHHHHHHHHHHHHHHHHH
Confidence 2210 00 111 1234455555564 34432 222333444333 34466899999999988877654
No 308
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.56 E-value=2.2e-12 Score=127.04 Aligned_cols=269 Identities=13% Similarity=0.016 Sum_probs=167.5
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDP 196 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~ 196 (486)
.+++.+++.+|.+ ++++|+|+++++..++. + . +++.|++...++..+...++.+|+
T Consensus 53 ~Lr~~ia~~~~~~---------~I~it~Gs~~al~~~~~-~-~-----------~gd~v~v~~P~y~~~~~~~~~~g~-- 108 (330)
T PRK05664 53 GLEAAARAYYGAP---------QLLPVAGSQAAIQALPR-L-R-----------APGRVGVLSPCYAEHAHAWRRAGH-- 108 (330)
T ss_pred HHHHHHHHHhCCC---------CEEECcCHHHHHHHHHH-c-c-----------CCCEEEEcCCChHHHHHHHHHcCC--
Confidence 4456677777742 58899999888755432 1 1 567788899999999999999999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHHHhCceEEeeccccchh
Q 038818 197 KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAKRYSIWVHVDAAYAGSA 273 (486)
Q Consensus 197 ~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~~~g~~lhvD~a~g~~~ 273 (486)
+++.||++ +++++++ . +.+++++.++||||.+-+ +++|+++|+++|+++++|.+|..+.
T Consensus 109 -~~~~v~~~----------~~~~~~~-~------~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~ 170 (330)
T PRK05664 109 -QVRELDEA----------EVEAALD-S------LDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNT 170 (330)
T ss_pred -eEEEechh----------hHhhhhc-C------CCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCC
Confidence 99888763 3445443 1 125777889999999866 5666667789999999999996432
Q ss_pred ccCccchhhhcCCCCCC--ceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCC
Q 038818 274 CICPEFRHFIDGIEGAD--SFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSR 350 (486)
Q Consensus 274 ~~~~~~~~~~~~~~~aD--si~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr 350 (486)
..+... .+..-+ .+..++.|.++ ...-+|+++.. ++...........+.
T Consensus 171 -~~~s~~----~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~-~~l~~~~~~~~~~~~---------------------- 222 (330)
T PRK05664 171 -PQHSLA----ACAHRPGLIVLRSFGKFFGLAGARLGFVLAE-PALLRALAELLGPWT---------------------- 222 (330)
T ss_pred -Cccccc----ccccCCCEEEEeeccccccCCCcceEEEEeC-HHHHHHHHHhcCCCC----------------------
Confidence 111111 111222 45667899998 55678888864 333332211111110
Q ss_pred CCCchHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHH
Q 038818 351 RFRALKLWLVLRSFG-VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNR 429 (486)
Q Consensus 351 ~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 429 (486)
...+..+++...+. .+..++..+...+.++++.+.|++. +++.. ......+.++. +. ..
T Consensus 223 -~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~-~~~~~f~~~~~-~~----------------~~ 282 (330)
T PRK05664 223 -VSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRH-GLTPA-GGCALFQWVRT-ED----------------AA 282 (330)
T ss_pred -CCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CCcceEEEEec-CC----------------HH
Confidence 11222233333332 2334556677777888999999887 55421 11112233332 11 24
Q ss_pred HHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 430 KLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 430 ~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
.+.+.+.++|+.+. . +....++|+++.. ++++.++++++|+++.++
T Consensus 283 ~~~~~l~~~gi~v~-~--f~~~~~iRis~~~---~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 283 ALHEFLARRGILTR-L--FEQPASLRFGLPA---DEADWARLDQALLAYRKE 328 (330)
T ss_pred HHHHHHHHCCeEEE-E--CCCCCeEEEECCC---CHHHHHHHHHHHHHHHhh
Confidence 56667777888543 2 2234689999853 466899999999887654
No 309
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.56 E-value=1.3e-11 Score=124.88 Aligned_cols=312 Identities=14% Similarity=0.078 Sum_probs=174.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEE-cCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVI-QGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ 190 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~-t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 190 (486)
++...++.+.|++++..+... ....+| +++||||+..|+..||... + ++.+|......|-...-+..
T Consensus 77 ~~~~~~lae~l~~~~~~~~~~----~~~~~f~~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~als 144 (412)
T TIGR02407 77 TEAKREFLETFNEIILKPRGL----DYKVQFPGPTGTNAVESALKLARKVT-------G-RSNVVSFTNAFHGMTLGSLS 144 (412)
T ss_pred cHHHHHHHHHHHHhccCccCC----CceEEEeCCCchHHHHHHHHHHhhhc-------C-CCeEEEECCCcCCchHHHHH
Confidence 455556677777765322211 002445 5899999999999999752 1 22334344445544333333
Q ss_pred HcCC---------CCCCeEEEecCCCCC-cccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc----CCchHHHHHH
Q 038818 191 IAGI---------DPKNFRAIKTTKSSS-FTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV----DPLGPLCDIA 256 (486)
Q Consensus 191 ~~G~---------g~~~v~~v~~d~~~~-~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i----dpl~~I~~i~ 256 (486)
..|. ....+..+|...... ..-+++.+++.+++.......+.+|++.-.....|.+ +-+++|.++|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc 224 (412)
T TIGR02407 145 VTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLC 224 (412)
T ss_pred hcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHH
Confidence 3321 112345555431000 0124777888886432111235567777666777774 2389999999
Q ss_pred HHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCC-CCcceEEEeeCchHHHHHhcCCcccccCccCCC
Q 038818 257 KRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFT-TLDCCCLWVKNPNALIKALSTNPEFLRNKASDS 335 (486)
Q Consensus 257 ~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~ 335 (486)
++||+++++|+++.|+.....-+.....++ ..|.++++ |+++. .+++|+++++++. ..+. + ....
T Consensus 225 ~~~g~llI~DEV~tG~GRtG~~~a~~~~~v-~PDi~~~~--K~lg~~G~pigav~~~~~~---~~~~--~-~~~~----- 290 (412)
T TIGR02407 225 RRHDILLIVDDIQAGCGRTGTFFSFEPAGI-EPDIVCLS--KSISGYGLPLALTLIKPEL---DVWK--P-GEHN----- 290 (412)
T ss_pred HHcCCEEEEechhhCCCccchhHHhcccCC-CCCEEEec--hhccCCccceeEEEEchhh---hccC--C-CccC-----
Confidence 999999999999976422111111111233 56877764 99986 7789999987642 1221 0 0000
Q ss_pred CCccCCCCccccCCCCCCch---HHHHHHHH-hchHHHHHHHHHHHHHHHHHHHHHh----CCCCeEEecCCCeeEEEEE
Q 038818 336 KQVVDYKDWQITLSRRFRAL---KLWLVLRS-FGVANLRNFLRSHVRMAQLFQELVG----GDNRFEIVAPRNFAVVCFR 407 (486)
Q Consensus 336 ~~~~~~~~~~~~~sr~~~~l---~~~~~l~~-~g~~g~~~~~~~~~~~a~~l~~~L~----~~~~~~~~~~~~~~~v~f~ 407 (486)
.++ ....+ ...+++.. +..+ +..++..++.++|++.|+ +.+++..-......++.+.
T Consensus 291 --------~T~----~gnpl~~aaa~a~l~~~i~~~---~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~ 355 (412)
T TIGR02407 291 --------GTF----RGNNLAFVTATAALEYYWSDD---AFEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIE 355 (412)
T ss_pred --------CCC----CccHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHhhCCCceEeeecceeEEEEE
Confidence 011 12233 22344443 3333 344555556666666654 3443322112223444555
Q ss_pred eecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 408 VLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
+.+ .....++.+.+.++|+++ .+.. .+...+|++. ....+++|++++++.|++++++
T Consensus 356 l~~--------------~~~~~~~~~~~~~~Gv~v-~~~~-~~~~~lr~~p-~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 356 CGD--------------GDLAGKIAKAAFENGLII-ETSG-PNDEVIKLLP-PLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred ecC--------------hHHHHHHHHHHHHCCCEE-eccC-CCCCEEEEEC-CCCCCHHHHHHHHHHHHHHHhC
Confidence 543 234567788888899854 3221 1235799988 5678889999999999988753
No 310
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.55 E-value=3.5e-11 Score=122.52 Aligned_cols=316 Identities=11% Similarity=0.048 Sum_probs=177.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
+..+.++.+.|++++.-+.. ...+|+++|||||..|+.+||... | ++.+|......|-...-+...
T Consensus 96 ~~~~~~lAe~L~~~~p~~~~------~~v~f~~SGsEA~e~AlklAr~~t-------g-r~~Ii~~~~~yHG~t~~~ls~ 161 (441)
T PRK05769 96 YEPAVELAERLVEIAPGGFE------KKVFFTNSGTESNEAAIKIARYHT-------G-RKYIIAFLGAFHGRTYGSLSL 161 (441)
T ss_pred CHHHHHHHHHHHHhCCCCCC------CEEEECCchHHHHHHHHHHHHHHh-------C-CCeEEEECCCcCCccHHHHHh
Confidence 44556677888887642111 157899999999999999999752 1 233444444455443333333
Q ss_pred cCC----------CCCCeEEEecCCCCC--cc-c--------CHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC--
Q 038818 192 AGI----------DPKNFRAIKTTKSSS--FT-L--------TPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP-- 248 (486)
Q Consensus 192 ~G~----------g~~~v~~v~~d~~~~--~~-~--------d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp-- 248 (486)
.|- ....+..+|....-. +. - +.+.+++.+.+....+..+.+|++.......|.+-|
T Consensus 162 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~ 241 (441)
T PRK05769 162 TASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPK 241 (441)
T ss_pred cCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCH
Confidence 321 012344555421000 00 1 123355423221111234667888777777888888
Q ss_pred --chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcc
Q 038818 249 --LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPE 326 (486)
Q Consensus 249 --l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~ 326 (486)
+++|.++|++||+++++|+++.|+.....-+.....++ ..|.+++ .|.++..++.|.++.+++- . ..+ ..
T Consensus 242 ~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv-~pDivt~--~K~l~~G~p~gav~~~~~i-~-~~~---~~ 313 (441)
T PRK05769 242 NFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGV-EPDIITL--AKAIAGGLPLGAVIGRAEL-M-FLP---PG 313 (441)
T ss_pred HHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCC-CCCEEEE--cccccCCcccEEEEEehhh-h-hcC---CC
Confidence 99999999999999999999976422111111111133 3587775 4888766778888876542 1 111 00
Q ss_pred cccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhch-HHHHHHHHHHHHHHHHHHHHHhCCC-CeEEecCC--Cee
Q 038818 327 FLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGV-ANLRNFLRSHVRMAQLFQELVGGDN-RFEIVAPR--NFA 402 (486)
Q Consensus 327 y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~--~~~ 402 (486)
.. . .|+ ....+.+.+++..+.. +. +..++..++.++|++.|+++. .+.++... ...
T Consensus 314 ~~-~-------------~T~----~g~p~~~aaa~a~L~~l~~--~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~ 373 (441)
T PRK05769 314 SH-A-------------NTF----GGNPVAAAAALATLEELEE--GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGL 373 (441)
T ss_pred CC-C-------------CCC----CcCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceE
Confidence 00 0 011 1133333333333311 11 566777888888888886531 12222111 233
Q ss_pred EEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 403 VVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 403 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
++.+.+.... .+...+....+.+.+.++|+++ .+ .+...+|++. ....|++|||+++++++++++++
T Consensus 374 ~~~i~~~~~~--------~~~~~~~~~~~~~~~~~~Gil~-~~---~~~~~lr~~p-~l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 374 MIGVELVKDR--------KEPDPKLRDKVLYEAFKRGLLL-LG---AGKSAIRIIP-PLIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred EEEEEeccCC--------ccccHHHHHHHHHHHHhCCcEE-ec---CCCCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHh
Confidence 4455443221 0001344567778888899753 22 2346799987 35678889999999999998765
No 311
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.54 E-value=4.2e-11 Score=120.72 Aligned_cols=310 Identities=14% Similarity=0.086 Sum_probs=172.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
++...++.+.|.++.+.. + ..+|+++||+||..|+..||.....+ |....+..+|......|-...-+...
T Consensus 81 ~~~~~~la~~L~~~~~~~-~-------~v~f~~sGseA~e~AlklAr~~~~~~-g~~~~r~~ii~~~~~yHG~t~~~~s~ 151 (408)
T PRK04612 81 SAPPLKLAEELVTASRFA-E-------KVFLCNSGTEANEAAIKLVRKWASSQ-GRPADKRVIVTFRGSFHGRTLAAVTA 151 (408)
T ss_pred CHHHHHHHHHHHhhCCCC-C-------EEEEcCchHHHHHHHHHHHHHHHHhh-CCCCCCcEEEEECCCcCCccHHHHHh
Confidence 344455667777775432 2 57999999999999999999764221 11000223444454556443434433
Q ss_pred cCCCC---------CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHHHHHH
Q 038818 192 AGIDP---------KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCDIAKR 258 (486)
Q Consensus 192 ~G~g~---------~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~i~~~ 258 (486)
.|-.. ..++.+|. -|++.|+++++. ..+.+|++.-.....|.+.| +++|.++|++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~-----~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~ 219 (408)
T PRK04612 152 TAQPKYQEGYEPLPGGFRYVDF-------NDVEALEAAMAG-----GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQ 219 (408)
T ss_pred cCCcccccCCCCCCCCceEcCC-------CCHHHHHHhhCC-----CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHH
Confidence 33210 11222221 278889888742 12444555443333344432 8999999999
Q ss_pred hCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCc
Q 038818 259 YSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQV 338 (486)
Q Consensus 259 ~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~ 338 (486)
||+++++|+++.++.....-+.....++ ..|.++ ..|.++..+.+|.++.+++ . .+.+... . .
T Consensus 220 ~g~llI~DEv~tg~gr~G~~~a~~~~~~-~pdi~t--~~K~l~~G~piga~~~~~~-~-~~~~~~~---~-~-------- 282 (408)
T PRK04612 220 HDALLVLDEIQCGMGRTGTLFAHWQEQV-TPDIVT--LAKALGGGFPIGAMLAGPK-V-AETMQFG---A-H-------- 282 (408)
T ss_pred cCCEEEEeccccCCCcCCchhhhhhcCC-CCCEEE--EcchhcCCCceEEEEECHH-H-HhhhcCC---C-c--------
Confidence 9999999999976422111111111111 245444 4798886677888877643 2 2222210 0 0
Q ss_pred cCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEec--CCCeeEEEEEeecCCCCC
Q 038818 339 VDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDN-RFEIVA--PRNFAVVCFRVLPSASGL 415 (486)
Q Consensus 339 ~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~--~~~~~~v~f~~~~~~~~~ 415 (486)
..++ ++.+....++..++..+-. .++.++..++.++|.+.|+++. .+.++. .....++.+.+.+..
T Consensus 283 ----~~t~-~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~--- 351 (408)
T PRK04612 283 ----GTTF-GGNPLAAAVARVALRKLAS---PQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAH--- 351 (408)
T ss_pred ----CCCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCch---
Confidence 0011 1112222233334443322 3566777888888888886641 122221 122334455443211
Q ss_pred CCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 416 GDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 416 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
......+.+.+.++|.++. + .+...+|++. ....+++|||++++.|++++.++.+
T Consensus 352 ---------~~~a~~i~~~l~~~Gvlv~-~---~g~~~lRl~P-pl~it~eeid~~l~~l~~~l~~~~~ 406 (408)
T PRK04612 352 ---------AGQAGAILDLAAEHGLLLL-Q---AGPDVLRFVP-ALNLTDAELADGLARLRLALADYVA 406 (408)
T ss_pred ---------hhHHHHHHHHHHHCCeEEe-e---CCCCEEEEcC-CccCCHHHHHHHHHHHHHHHHHHhh
Confidence 1234567778888897543 2 2446899987 5677899999999999999987654
No 312
>PRK12403 putative aminotransferase; Provisional
Probab=99.54 E-value=6.8e-11 Score=121.02 Aligned_cols=328 Identities=13% Similarity=0.028 Sum_probs=177.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEE-ecCCCchHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVY-GSDQTHSALQKAAQ 190 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~a~~ 190 (486)
.....++.+.|+++++-..+ ..+|+++||+||..|+.++|...... |.. .+.+|+ .....|-+..-++.
T Consensus 97 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGseA~e~AiklAr~~~~~~-g~~--~r~~ii~~~~~yHG~t~~~~s 166 (460)
T PRK12403 97 HPAVIELSELLFSLLPGHYS-------HAIYTNSGSEANEVLIRTVRRYWQVL-GKP--QKKIMIGRWNGYHGSTLAATA 166 (460)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhh-CCC--CCcEEEEECCCcCcccHhhhh
Confidence 44455666778888753212 57999999999999999998753221 110 233333 33445766555555
Q ss_pred HcCCC--------CCCeEEEecCCC--CCcc--------cCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----
Q 038818 191 IAGID--------PKNFRAIKTTKS--SSFT--------LTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---- 248 (486)
Q Consensus 191 ~~G~g--------~~~v~~v~~d~~--~~~~--------~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---- 248 (486)
..|.. ...+..+|.... ..+. .+.++|++.+.+.. ...+.+|++.......|.+-|
T Consensus 167 ~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~--~~~iaavI~Epv~g~gG~~~~~~~y 244 (460)
T PRK12403 167 LGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELG--AENVAGFVAEPFQGAGGMIFPPESY 244 (460)
T ss_pred cCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhC--CCceEEEEEccccCCCCCccCCHHH
Confidence 54431 012344442210 0001 11355666554321 123556777777777788877
Q ss_pred chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcCCc-c
Q 038818 249 LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALSTNP-E 326 (486)
Q Consensus 249 l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~~~-~ 326 (486)
+++|.++|++||+.|++|++++|+.-...-+....-++ ..|.++ .-|.++..+ ++|.++++++ . .+.+.... .
T Consensus 245 l~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv-~PDiv~--~gK~lggG~~Piga~v~~~~-i-~~~~~~~~~~ 319 (460)
T PRK12403 245 WPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGF-EPDTLS--IAKGLTSGYVPMGGLVLSKR-I-AEALVEQGGV 319 (460)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCC-CCCeEE--EcccccccccceEEEEECHH-H-HHHHhcCCCc
Confidence 99999999999999999999976532221111111234 368887 579888665 6888887643 2 22332111 1
Q ss_pred cccCccCCCCCccCCCCccccCCCCCCchHHHH---HHHHhchHHHHHHHHHHH-HHHHHHHHHHhCC-CCeEEecC--C
Q 038818 327 FLRNKASDSKQVVDYKDWQITLSRRFRALKLWL---VLRSFGVANLRNFLRSHV-RMAQLFQELVGGD-NRFEIVAP--R 399 (486)
Q Consensus 327 y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~---~l~~~g~~g~~~~~~~~~-~~a~~l~~~L~~~-~~~~~~~~--~ 399 (486)
++.. .+.....+.+.+ +|+.+-.+. ..++.. ++.++|++.|+++ ....++.. -
T Consensus 320 ~~~~-----------------~T~~gnPl~~Aaala~L~~i~~~~---l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG 379 (460)
T PRK12403 320 FAHG-----------------LTYSGHPVAAAVAIANLKALRDEG---VVTRVKDDTGPYLQRCLREVFGDHPLVGEVQG 379 (460)
T ss_pred cccC-----------------CCCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHhcCCCEEeEee
Confidence 1110 111223344433 444443332 345553 5666666666432 11112211 1
Q ss_pred CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 400 NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 400 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
...++.+.+...... . ...........++.+.+.++|.+.... + ..+|++. ....|++|||++++++++++
T Consensus 380 ~Gl~~gie~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~Gll~~~~----~-~~~~l~P-pl~it~~eid~~~~~l~~al 450 (460)
T PRK12403 380 AGLVAALQFAEDKAT--R-KRFANENDLAWRCRTIGFEEGVIIRST----L-GRMIMAP-ALVAGRAEIDELVDKTRIAV 450 (460)
T ss_pred cceEEEEEEccCccc--c-ccccchhHHHHHHHHHHHhCCEEEEec----C-CEEEEEC-CCCCCHHHHHHHHHHHHHHH
Confidence 233445544322100 0 000000123445667778889754321 1 2477765 34568899999999999999
Q ss_pred HHHhhc
Q 038818 480 DGILAT 485 (486)
Q Consensus 480 ~~l~~~ 485 (486)
+++.++
T Consensus 451 ~~~~~~ 456 (460)
T PRK12403 451 DRTARE 456 (460)
T ss_pred HHHHHH
Confidence 888654
No 313
>PRK06541 hypothetical protein; Provisional
Probab=99.53 E-value=3.9e-11 Score=122.64 Aligned_cols=335 Identities=12% Similarity=0.060 Sum_probs=181.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.+...++.+.+.+++.-+-+ ..+|+++||+|+..|+..||..... .|..+ ...+|......|-...-+...
T Consensus 94 ~~~~~~la~~l~~~~p~~~~-------~v~f~~sGseAve~AlklAr~~~~~-~g~~~-r~~ii~~~~~yHG~t~~a~s~ 164 (460)
T PRK06541 94 HPPAIELAERLAALAPGDLN-------RVFFTTGGSEAVESAWKLAKQYFKL-TGKPG-KHKVISRAIAYHGTTQGALAI 164 (460)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEcCCcHHHHHHHHHHHHHHHHh-cCCCC-ccEEEEEcCcccCcchhhhcC
Confidence 34445566777777532212 5799999999999999999875321 11111 233444455556444333333
Q ss_pred cCCC---------CCCeEEEecCCCCC---cccC--------HHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---
Q 038818 192 AGID---------PKNFRAIKTTKSSS---FTLT--------PESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP--- 248 (486)
Q Consensus 192 ~G~g---------~~~v~~v~~d~~~~---~~~d--------~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp--- 248 (486)
.|.. ...+..+|....-. +.-+ ++.|++.++.. ....+.+|++....++.|.+-|
T Consensus 165 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~Aavi~EPv~g~~G~~~~~~~ 242 (460)
T PRK06541 165 TGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFE--GPDTVAAVFLEPVQNAGGCFPPPPG 242 (460)
T ss_pred cCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCCEEEEEECCccCCCCCccCCHH
Confidence 3221 11234444321000 1112 35667666532 1234556777766788899888
Q ss_pred -chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcCCc-
Q 038818 249 -LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALSTNP- 325 (486)
Q Consensus 249 -l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~~~- 325 (486)
+++|.++|++||+.+++|+++.|+.....-+.....++ ..|.++ ..|.++..+ +.|.++.+++-. +.+....
T Consensus 243 yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv-~PDivt--~gK~l~~G~~pigav~~~~~i~--~~~~~~~~ 317 (460)
T PRK06541 243 YFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGY-VPDIIT--CAKGITSGYSPLGAMIASDRLF--EPFLDGPT 317 (460)
T ss_pred HHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCC-CCCEEE--ecccccCCccceeEEEEcHHHH--HHhhcCCC
Confidence 99999999999999999999965422221111111233 467776 579888655 678888765522 2222111
Q ss_pred ccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEec--CCCeeE
Q 038818 326 EFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVA--PRNFAV 403 (486)
Q Consensus 326 ~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~--~~~~~~ 403 (486)
.+.. ..+-...++++.+++..+..-.-.+..++..++.++|.+.|+++....++. .....+
T Consensus 318 ~~~~-----------------~~T~~gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~ 380 (460)
T PRK06541 318 MFLH-----------------GYTFGGHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYF 380 (460)
T ss_pred cccc-----------------CCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceE
Confidence 1110 011112334444444333111112355777888888888887653222211 122334
Q ss_pred EEEEeecCCC-CCCCCCCccchH-HHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 404 VCFRVLPSAS-GLGDGKANEGAN-ELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 404 v~f~~~~~~~-~~~~~~~~~~~~-~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
+.+.+..+.. +.. -.....+ .....+.+.+.++|+++ .+. ..+...+|++.. ...|++|||+++++|++++++
T Consensus 381 ~~ie~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~Gi~~-~~~-~~g~~~lrl~Pp-l~~t~~~id~~~~~l~~~l~~ 455 (460)
T PRK06541 381 YGIELVKDKATKET--FTDDESERLLRGFLSPALFEAGLYC-RAD-DRGDPVVQLAPP-LISGQEEFDEIEQILRSVLTE 455 (460)
T ss_pred EEEEEecCcccccC--CcchhhhhhHHHHHHHHHHhCCeEE-Eec-CCCCCEEEEECC-CCCCHHHHHHHHHHHHHHHHH
Confidence 4554432110 000 0000001 12235677888889753 331 124467999873 567888999999999999987
Q ss_pred Hhh
Q 038818 482 ILA 484 (486)
Q Consensus 482 l~~ 484 (486)
+.+
T Consensus 456 ~~~ 458 (460)
T PRK06541 456 AWA 458 (460)
T ss_pred HHh
Confidence 643
No 314
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.53 E-value=4.7e-12 Score=127.25 Aligned_cols=233 Identities=15% Similarity=0.189 Sum_probs=168.0
Q ss_pred HHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCC
Q 038818 118 VMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPK 197 (486)
Q Consensus 118 ~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~ 197 (486)
..+..++.||.+.+| ++++|+|.||...+.+... +++.|++...+|-|+..+..+.|+
T Consensus 75 Aqe~aA~~fgAd~ty--------FvvNGTS~ank~vi~a~~~-----------~GD~VLvdRN~HKSi~~glilaGa--- 132 (557)
T COG1982 75 AQELAARVFGADHTY--------FVVNGTSTANKAVINAVLT-----------PGDKVLVDRNCHKSIHHGLILAGA--- 132 (557)
T ss_pred HHHHHHHHhCCCceE--------EEECCccHHHHHHHHhhcC-----------CCCEEEecCCccHHHHHHHHHcCC---
Confidence 348889999999875 8889988899766665544 788999999999999999999999
Q ss_pred CeEEEecCCCC----CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchh
Q 038818 198 NFRAIKTTKSS----SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSA 273 (486)
Q Consensus 198 ~v~~v~~d~~~----~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~ 273 (486)
..+++....+. -+.++.+.+++++.+..... .+++++.+ |..|..-++++|.+.++++++|+.+|.+|+...
T Consensus 133 ~Pvyl~p~~np~~gi~ggI~~~~~~~~l~~~~~~~---k~~vitnp-TYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~ 208 (557)
T COG1982 133 TPVYLEPSRNPLYGIIGGIPLETFKEALLAHPDAE---KLAVITNP-TYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHF 208 (557)
T ss_pred ceEEecCCCCccccccCCCCHHHHHHHHHhChhhh---eeEEEecC-ccceEeecHHHHHHHHhhcCceEEhhhcCcccc
Confidence 88877654322 25789999999887654321 35666655 558999999999999999999999999998877
Q ss_pred ccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCc-----hHHHHHhc----CCcccccCccCCCCCccCCCCc
Q 038818 274 CICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNP-----NALIKALS----TNPEFLRNKASDSKQVVDYKDW 344 (486)
Q Consensus 274 ~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~-----~~~~~~~~----~~~~y~~~~~~~~~~~~~~~~~ 344 (486)
.+.+.... ..--..+|.++-|.||.+++--.++.+.+++. ..+..++. ..|.|.-
T Consensus 209 ~~~~~l~~-~~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l--------------- 272 (557)
T COG1982 209 DFSPMLPE-SALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPL--------------- 272 (557)
T ss_pred cccccCcc-hhhhcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHHHHccCCchHHH---------------
Confidence 66654333 11113799999999999998889999999972 33333331 1111110
Q ss_pred cccCCCCCCchHH-HHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC
Q 038818 345 QITLSRRFRALKL-WLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR 399 (486)
Q Consensus 345 ~~~~sr~~~~l~~-~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 399 (486)
+.++-+ -..+...|..-.++.++...+.++.+++..+++++|+++.++
T Consensus 273 -------~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~ 321 (557)
T COG1982 273 -------MASLDVARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPE 321 (557)
T ss_pred -------HHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecccc
Confidence 011111 011111244445566888899999999999999889988765
No 315
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.53 E-value=3.6e-11 Score=122.76 Aligned_cols=322 Identities=13% Similarity=0.067 Sum_probs=176.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.+...++.+.+++++..... ...+|+++||+|+..|+..||... | ++.+|......|-...-+...
T Consensus 98 ~~~~~~la~~l~~~~p~~~~------~~v~f~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~al~~ 163 (443)
T PRK06058 98 YEGYVAVAEQLNRLTPGDHE------KRSALFNSGAEAVENAVKIARSYT-------G-RQAVVVFDHAYHGRTNLTMAL 163 (443)
T ss_pred CHHHHHHHHHHHHhCCCCCC------CEEEEeCCcHHHHHHHHHHHHHhh-------C-CCeEEEECCCcCcChHHHHhh
Confidence 34555677888888753211 146889999999999999998752 1 223444444455544444443
Q ss_pred cCC--------C--CCCeEEEecCCCCC----cccCH-HHHHHHHHHHHH--CCCccEEEEeecCCccccccCC----ch
Q 038818 192 AGI--------D--PKNFRAIKTTKSSS----FTLTP-ESLQAAIDLDIQ--AGLIPLFLCATVGTTAITTVDP----LG 250 (486)
Q Consensus 192 ~G~--------g--~~~v~~v~~d~~~~----~~~d~-~~L~~~l~~~~~--~g~~p~~vv~~~gtt~~G~idp----l~ 250 (486)
.+. + ...+..+|....-+ ...+. +.+++.++.-.+ .+..+.+|++.-.....|.+-| ++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~ 243 (443)
T PRK06058 164 TAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLP 243 (443)
T ss_pred cCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHH
Confidence 321 1 11233343211000 00111 222222221111 1233556776665555566654 99
Q ss_pred HHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccC
Q 038818 251 PLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRN 330 (486)
Q Consensus 251 ~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~ 330 (486)
+|.++|++||+.+++|+++.|+......+.....++ ..|.+++ -|.++..++.|.++.+++ .. +.+... ..
T Consensus 244 ~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv-~PDiv~~--gK~l~~G~Pi~av~~~~~-i~-~~~~~~--~~-- 314 (443)
T PRK06058 244 ALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGI-VPDLITT--AKGIAGGLPLSAVTGRAE-IM-DAPHPG--GL-- 314 (443)
T ss_pred HHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCC-CCCEEEE--cccccCCCccEEEEEcHH-HH-hhccCC--CC--
Confidence 999999999999999999977532211111111233 4688887 499887788999888654 22 222110 00
Q ss_pred ccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEec--CCCeeEEEEE
Q 038818 331 KASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDN-RFEIVA--PRNFAVVCFR 407 (486)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~--~~~~~~v~f~ 407 (486)
..+-....+.+.+++..+..-.-.++.++..++.++|.+.|+++. ...++. .....++.+.
T Consensus 315 ----------------~~T~~gnpl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~ 378 (443)
T PRK06058 315 ----------------GGTYGGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIE 378 (443)
T ss_pred ----------------CCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEE
Confidence 011122444444444443211112456677777888888886531 112211 2233455555
Q ss_pred eecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 408 VLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
+.++.. .....+...++.+.+.++|.+......+ ..++|+.. ....|++|||++++.|+++++++
T Consensus 379 ~~~~~~-------~~~~~~~~~~l~~~~~~~Gv~~~~~~~~--~~~lr~~P-pl~~t~~~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 379 LVKPGT-------TEPDAELTKALAAAAHAAGVIVLTCGTY--GNVIRLLP-PLVIGDELLREGLDVLEAALADL 443 (443)
T ss_pred EecCCC-------CCCcHHHHHHHHHHHHHCCeEEeccCCC--CCEEEEEC-CCccCHHHHHHHHHHHHHHHHhC
Confidence 543210 0011345667888888899754322211 25799986 45778889999999999988653
No 316
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.53 E-value=2.3e-11 Score=120.71 Aligned_cols=321 Identities=13% Similarity=0.047 Sum_probs=199.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHc
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIA 192 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 192 (486)
+...++.+.|.+++.-+.. .-.+|+++||+||-.|+..||... | ...+|-.....|-.-.-++.+.
T Consensus 99 e~~v~~ae~L~~~~p~~~~------~~~~f~~sGaeA~E~AiKiAr~~T-------g-r~~viaf~~afHG~T~galslT 164 (447)
T COG0160 99 EPYVELAEKLTALAPGSGL------KKVFFGNSGAEAVEAAIKIARAYT-------G-RPGVIAFDGAFHGRTLGALSLT 164 (447)
T ss_pred hhHHHHHHHHHHhCCcccC------CeEEecCCcHHHHHHHHHHHHHHh-------C-CCcEEEECCcccccchhhHHhc
Confidence 3344455666666543211 257999999999999999999874 1 2334445556665555555444
Q ss_pred C--------CC--CCCeEEEecCCC--CC--------cccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----
Q 038818 193 G--------ID--PKNFRAIKTTKS--SS--------FTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---- 248 (486)
Q Consensus 193 G--------~g--~~~v~~v~~d~~--~~--------~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---- 248 (486)
| .+ ...|+.+|.... +. ..-..+.+++.|......+..|.++++.......|.+.|
T Consensus 165 ~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~f 244 (447)
T COG0160 165 GSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGF 244 (447)
T ss_pred cCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHH
Confidence 2 22 124777776521 00 122345567766666656667889999998998898866
Q ss_pred chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccc
Q 038818 249 LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFL 328 (486)
Q Consensus 249 l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~ 328 (486)
++++.++|++||+.+++|.++.|+..-..-+..--.++ ..|.+|+ .|.++...+.|.++.|.+-. ...++-.
T Consensus 245 l~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv-~PDivt~--aK~ig~G~Pl~avv~r~ei~-----~~~~g~~ 316 (447)
T COG0160 245 LKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGV-EPDIVTL--AKSLGGGLPLSAVVGRAEIM-----DWPPGGH 316 (447)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCC-CCCEEEe--cccccCCCceeEEeccHHhc-----ccCCccc
Confidence 89999999999999999999988643221111112234 5788886 48888888889888875421 1011100
Q ss_pred cCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEecCCCe--eEEE
Q 038818 329 RNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGD-NRFEIVAPRNF--AVVC 405 (486)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~~~~~~~~--~~v~ 405 (486)
..+-+.+.+++.++++.+-.-.-+.+.++..++.++|++.|.++ ..+.++++.+. -++.
T Consensus 317 ------------------~~Tf~GNpva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~g 378 (447)
T COG0160 317 ------------------GGTFGGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIG 378 (447)
T ss_pred ------------------CCCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEE
Confidence 01112244444444444421122257788888888998888654 13444554432 3344
Q ss_pred EEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 406 FRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 406 f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
..+..+.. ..+...+...++.+++.++|.+..+.+.. .+++|+.. -...+++++|.++++|.++++++
T Consensus 379 iE~v~d~~------t~~p~~~~~~~i~~~~~~~Glil~~~G~~--~nviRi~P-PL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 379 VELVKDRD------TKEPDAELAAKIVARAFERGLLLLTCGPH--GNVLRILP-PLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred EEEecCCC------CCCCCHHHHHHHHHHHHHcCCEEeccCCC--CcEEEEeC-CcccCHHHHHHHHHHHHHHHHhh
Confidence 44432210 01112467788999999999865554322 56799987 35668889999999999988764
No 317
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=99.52 E-value=3.4e-13 Score=129.79 Aligned_cols=265 Identities=20% Similarity=0.295 Sum_probs=178.7
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHH-ccccC------CCCeEEEecCCCch
Q 038818 111 ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNE-IGREN------ISRLVVYGSDQTHS 183 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~-~~~~~------~~~~~v~~s~~~H~ 183 (486)
+.-+.-.+..|++.||.+.++-.|.+.....|...-..++..++..|....+.. .-.+| ...+++|+|...|.
T Consensus 163 an~i~Gdanh~fgnLF~FAdsqiycsdPaasfhadiadai~haVkLAikar~~~dhs~eG~~afaa~aaPt~YiS~alh~ 242 (838)
T KOG0630|consen 163 ANSISGDANHVFGNLFHFADSQIYCSDPAASFHADIADAIGHAVKLAIKARCGGDHSLEGGIAFAALAAPTFYISEALHM 242 (838)
T ss_pred HHhhccchHHHHHHHHhhcccccccCCchhhhhhhhhhHHHHHHHhhhhhccCCccccccccchHhhcCceEEEcccccH
Confidence 344555677899999988664322222222333222233333333333221111 00111 25689999999998
Q ss_pred H-HHHHHHHcCCCCCCeEEEec-CCCC-CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhC
Q 038818 184 A-LQKAAQIAGIDPKNFRAIKT-TKSS-SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYS 260 (486)
Q Consensus 184 s-~~~a~~~~G~g~~~v~~v~~-d~~~-~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g 260 (486)
- ..-+|+.+|+....+..++- |..+ .|+||...+++.|+++..+|..|+++++..|++..|..|-|-+|.++|++++
T Consensus 243 ~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi~kildi~eaha 322 (838)
T KOG0630|consen 243 DLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMILKILDICEAHA 322 (838)
T ss_pred HHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHHHHHHHHHHHhh
Confidence 6 45678999985433333321 2111 3699999999999999999999999999999999999999999999999997
Q ss_pred -ceEEeeccccchhccCccchhhhcC-CCCCCceeeccccccCCCCcceEEEeeCchHH-HHHhcCCcccccCccCCCCC
Q 038818 261 -IWVHVDAAYAGSACICPEFRHFIDG-IEGADSFSLNAHKWFFTTLDCCCLWVKNPNAL-IKALSTNPEFLRNKASDSKQ 337 (486)
Q Consensus 261 -~~lhvD~a~g~~~~~~~~~~~~~~~-~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~-~~~~~~~~~y~~~~~~~~~~ 337 (486)
+|+|.-| ++..++.|.+....+-. .+..||++.+.--|++.|-.--+++-|.-+-. ..+|...
T Consensus 323 kfWLHasG-haiAALt~aepnnil~HV~eqldSMal~ialWLGiPSaPiV~LHRPleg~aaSafesd------------- 388 (838)
T KOG0630|consen 323 KFWLHASG-HAIAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSAPIVLLHRPLEGSAASAFESD------------- 388 (838)
T ss_pred heeEeecc-chhhheeecCcccchhHHHHHHhhccchhHHHhCCCCCceEEeecccccccchhcccC-------------
Confidence 9999986 33334434332222222 25789999999999999854433333321110 0011111
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEec
Q 038818 338 VVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVA 397 (486)
Q Consensus 338 ~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 397 (486)
.-..++..++.+|.+++++|.+.+.++++....+...+.+.+.+.+++++++
T Consensus 389 --------pi~rekLdaLp~Wta~q~LggKaIadmienAFll~kilfe~aSa~~eiemig 440 (838)
T KOG0630|consen 389 --------PILREKLDALPLWTALQALGGKAIADMIENAFLLCKILFEGASACEEIEMIG 440 (838)
T ss_pred --------hHHHHhhccchHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhcCCceeEec
Confidence 1234567899999999999999999999999999999999999999999875
No 318
>PRK06105 aminotransferase; Provisional
Probab=99.52 E-value=3.7e-11 Score=122.92 Aligned_cols=329 Identities=11% Similarity=0.068 Sum_probs=181.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
...+.++.+.|++++..+.. ..+|+++||+||..|+.++|...... +..+ +..+|......|-...-+...
T Consensus 91 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGseAve~AlKlar~~~~~~-g~t~-r~~il~~~~~yHG~t~~a~s~ 161 (460)
T PRK06105 91 HGPVIDLAEKLVAMAPVPMS-------KVFFTNSGSEANDTVVKLVWYYNNAL-GRPE-KKKIISRQRGYHGVTIASASL 161 (460)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEecCccCCcchhheec
Confidence 44555677788887743222 57899999999999999998643111 1111 233444555566544333332
Q ss_pred cCCC---------CCCeEEEecCCCCCcc-------------cCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC-
Q 038818 192 AGID---------PKNFRAIKTTKSSSFT-------------LTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP- 248 (486)
Q Consensus 192 ~G~g---------~~~v~~v~~d~~~~~~-------------~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp- 248 (486)
.|.. ...+..+|... .++ -..++|++++... ....+..|++.......|.+-|
T Consensus 162 t~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iAavIvEPiqg~gG~~~~~ 237 (460)
T PRK06105 162 TGLPNNHRSFDLPLDRILHTGCPH--YYRFGLPGESEEAFATRLANELEALILAE--GPDTIAAFIGEPVMGAGGVIVPP 237 (460)
T ss_pred cCCcccccccCCCCCCCEEcCCCc--ccccccCCCChHHHHHHHHHHHHHHHHHc--CCCceEEEEEccccCCCCCccCC
Confidence 2211 11233343321 001 1245677776431 1234567888777777788777
Q ss_pred ---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCC
Q 038818 249 ---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTN 324 (486)
Q Consensus 249 ---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~ 324 (486)
+++|.++|++||+.+++|+++.|+.....-+.....++ ..|.+++ .|.++.. .+.|.++.+++ . .+.+...
T Consensus 238 ~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v-~PDi~~~--gK~lggG~~P~~av~~~~~-i-~~~~~~~ 312 (460)
T PRK06105 238 KTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGI-KPDILVM--SKQLSSSYQPLSAVLMNEK-V-YDPIADE 312 (460)
T ss_pred HHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCC-CCCeeee--ecccccCcccceEEEEcHH-H-HHHHhcc
Confidence 99999999999999999999966533221111111233 4777765 6888765 36788887754 2 2233211
Q ss_pred cccccCccCCCCCccCCCCccccCCCCCCchHHHH---HHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC--
Q 038818 325 PEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWL---VLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR-- 399 (486)
Q Consensus 325 ~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-- 399 (486)
..... .+....+-...++.+.+ +|..+-. .+..++..++.++|++.|+++....++...
T Consensus 313 ~~~~~-------------~~~h~~T~~gnpl~~aaa~a~L~~i~~---~~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG 376 (460)
T PRK06105 313 SGKIG-------------TFGHGFTASGHPVAAAVALENLAIIEE---RDLVGNAAERGARLQARLRALADHPLVGEVRG 376 (460)
T ss_pred cccCc-------------ccccCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 10000 00001111223444333 4444422 246678888888888888765322222111
Q ss_pred CeeEEEEEeecCCC-CCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 400 NFAVVCFRVLPSAS-GLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 400 ~~~~v~f~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
...+..+.+.++.. +.. ..........+...+.++|.++ .+. + ..+|++. ....|++|||++++.+.++
T Consensus 377 ~Gl~~gie~~~~~~~~~~----~~~~~~~a~~i~~~~~~~Gvl~-~~~---g-~~i~l~P-pl~it~~eid~~~~~l~~~ 446 (460)
T PRK06105 377 VGLIAAVELVADKATKTP----FEPPGKVGARANAAAHEHGVIS-RAM---G-DTLAFCP-PLIITAAQVDEMVDRFGRA 446 (460)
T ss_pred cceEEEEEEecCcccCCC----CCchhHHHHHHHHHHHHCCeEE-Eec---C-CEEEEEC-CCccCHHHHHHHHHHHHHH
Confidence 12344454432210 000 0001233456778888889754 331 2 4789886 3456889999999999999
Q ss_pred HHHHhh
Q 038818 479 LDGILA 484 (486)
Q Consensus 479 ~~~l~~ 484 (486)
++++.+
T Consensus 447 l~~~~~ 452 (460)
T PRK06105 447 LDDVAA 452 (460)
T ss_pred HHHHHH
Confidence 988754
No 319
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.52 E-value=3.1e-12 Score=123.63 Aligned_cols=212 Identities=15% Similarity=0.112 Sum_probs=148.8
Q ss_pred HHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCch----HHHHHHHHcC
Q 038818 118 VMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHS----ALQKAAQIAG 193 (486)
Q Consensus 118 ~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~----s~~~a~~~~G 193 (486)
+.+.++.+-|.+ ..+.+++|..|...++..... .+..|++....+- -+.+....+|
T Consensus 82 le~~iaal~ga~---------~~l~fsSGmaA~~~al~~L~~-----------~g~~iV~~~~~Y~gT~~~l~~~~~~~g 141 (409)
T KOG0053|consen 82 LESGIAALEGAA---------HALLFSSGMAAITVALLHLLP-----------AGDHIVATGDVYGGTLRILRKFLPKFG 141 (409)
T ss_pred HHHHHHHHhCCc---------eEEEecccHHHHHHHHHHhcC-----------CCCcEEEeCCCcccHHHHHHHHHHHhC
Confidence 335578887765 357778877677666665542 3444555544432 2556666778
Q ss_pred CCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchh
Q 038818 194 IDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSA 273 (486)
Q Consensus 194 ~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~ 273 (486)
+ ....+.++ |++.+++++++++ .+|.+..++||++.+-||++|+++|+++|+.++||.+++++.
T Consensus 142 i---e~~~vd~~-------~~~~~~~~i~~~t------~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~ 205 (409)
T KOG0053|consen 142 G---EGDFVDVD-------DLKKILKAIKENT------KAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPY 205 (409)
T ss_pred c---eeeeechh-------hHHHHHHhhccCc------eEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCccc
Confidence 8 77777654 6788888888754 489999999999999999999999999999999999998874
Q ss_pred ccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC
Q 038818 274 CICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR 351 (486)
Q Consensus 274 ~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~ 351 (486)
. ++.+.. +||.++-|..||+++.-. .|.+..+.++..++..... .++. --
T Consensus 206 ~-~~pL~l------GADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~-~~lg--------------------~~ 257 (409)
T KOG0053|consen 206 N-QDPLPL------GADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQ-EDLG--------------------WC 257 (409)
T ss_pred c-cChhhc------CCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHH-HHhc--------------------CC
Confidence 3 322221 699999999999996643 5666666554443322111 1111 12
Q ss_pred CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Q 038818 352 FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEI 395 (486)
Q Consensus 352 ~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 395 (486)
..++.+|..+| |.+-+.-++++..+++..+++.|++.|.++-
T Consensus 258 ~~p~~~~ll~R--glktl~lRi~~~~ena~~~A~~Le~~~~v~k 299 (409)
T KOG0053|consen 258 EDPFDLFLLSR--GLKTLHLRINKHSENALKIALLLEAHPKVKK 299 (409)
T ss_pred CCHHHHHHHhc--CcchhhhhHHHHHHHHHHHHHHhhhCCceeE
Confidence 35566666665 5566677888999999999999999888874
No 320
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.52 E-value=6.3e-11 Score=120.65 Aligned_cols=319 Identities=13% Similarity=0.071 Sum_probs=177.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.+.+.++.+.|+++++...+ ..+|+++||||+..|+..||... + ++.++-.....|-...-+...
T Consensus 83 ~~~~~~la~~L~~~~p~~~~-------~v~f~~sGsEAve~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~a~s~ 147 (443)
T PRK08360 83 PVEPLLLAEKLIEIAPGDNP-------KVSFGLSGSDANDGAIKFARAYT-------K-RRKILSYLRSYYGSTYGAMSL 147 (443)
T ss_pred cHHHHHHHHHHHHhCCCCCC-------EEEEcCCHHHHHHHHHHHHHHhc-------C-CCeEEEEeCCcCCcCHHHHHh
Confidence 34455666778887754322 57999999999999999998752 1 222333333445433333333
Q ss_pred cCCC---------CCCeEEEecCCCCC--cc--------cCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----
Q 038818 192 AGID---------PKNFRAIKTTKSSS--FT--------LTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---- 248 (486)
Q Consensus 192 ~G~g---------~~~v~~v~~d~~~~--~~--------~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---- 248 (486)
.|.. ...+..+|...... +. -+++.++++++... .+..+.+|++.-..+++|.+-|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iAAvi~eP~~~~~G~~~~~~~~ 226 (443)
T PRK08360 148 TGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEV-YAEGVAALFAEPIQGDAGMIVPPEDY 226 (443)
T ss_pred cCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhcc-CCCCeEEEEECCccCCCCCcCCCHHH
Confidence 3321 12345555432100 00 12345566664321 1234667777777788898755
Q ss_pred chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccc
Q 038818 249 LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFL 328 (486)
Q Consensus 249 l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~ 328 (486)
+++|.++|++||+++++|++|.++......+.....++ ..|.+++ .|.++..+..|+++.+++ .. +.+... .+.
T Consensus 227 l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~-~pDiitl--sK~l~~G~pigav~~~~~-i~-~~~~~~-~~~ 300 (443)
T PRK08360 227 FKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGV-EPDIITL--GKPLGGGLPISATIGRAE-IM-DSLPPL-AHA 300 (443)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCC-CCCEEEe--cccccCCceeEEEEEcHH-HH-hhhcCC-CCC
Confidence 89999999999999999999986432111111111133 3576665 899986667888887643 22 222110 000
Q ss_pred cCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEec--CCCeeEEE
Q 038818 329 RNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDN-RFEIVA--PRNFAVVC 405 (486)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~--~~~~~~v~ 405 (486)
.+.. +.+.....+..++..+-.+ +..++..++.++|++.|+++. ...++. .....++.
T Consensus 301 ---------------~T~~-~~p~~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~g 361 (443)
T PRK08360 301 ---------------FTLS-GNPVASAAALAVIEEIEEK---NLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIG 361 (443)
T ss_pred ---------------CCCC-cCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEE
Confidence 0111 1111122333344444222 355677777777777775431 111111 12234455
Q ss_pred EEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 406 FRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 406 f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
+.+..+... .........++.+.+.++|.+ +.+. +...+|++. ....|++|||+++++++++++.+
T Consensus 362 ie~~~~~~~------~~~~~~~~~~~~~~l~~~Gi~-~~~~---~~~~lr~~P-~l~~t~~~id~~~~~l~~~l~~~ 427 (443)
T PRK08360 362 VDLVKDRET------KERAYEEAAKVVWRAWELGLI-VTFF---SGNVLRIQP-PLTIEKEVLDEGLDILEEAIEDV 427 (443)
T ss_pred EEEecCCcc------cCccHHHHHHHHHHHHHCCeE-Eeec---CCCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHH
Confidence 555322100 000023345777888889974 3321 236799987 46778899999999999988765
No 321
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.51 E-value=1.4e-11 Score=125.63 Aligned_cols=309 Identities=12% Similarity=0.039 Sum_probs=162.2
Q ss_pred HHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEE-ecCCCchHHHHHHHHcC
Q 038818 115 ENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVY-GSDQTHSALQKAAQIAG 193 (486)
Q Consensus 115 e~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~a~~~~G 193 (486)
..++.+.+++.+.-.+ ..++++|||+|+..|+.++|... ++..|+ .....|-.........+
T Consensus 90 ~~~lae~l~~~~~~~~--------~v~~~~sGseA~e~Alk~ar~~~---------gr~~ii~~~~~yhG~~~~~~~~~~ 152 (423)
T TIGR00713 90 EILLAKEIISRVPSVE--------MVRFVNSGTEATMSAVRLARGYT---------GRDKIIKFEGCYHGHHDALLVKAG 152 (423)
T ss_pred HHHHHHHHHHhCCccc--------EEEEeCCHHHHHHHHHHHHHHhh---------CCCEEEEEcCCCCCChhhhhcccc
Confidence 3445566777664322 57999999999999999998752 233344 34334443222222111
Q ss_pred CCCC----------------CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHH
Q 038818 194 IDPK----------------NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLC 253 (486)
Q Consensus 194 ~g~~----------------~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~ 253 (486)
.+.. .+..+| ..|+++|+++++.. +..+.+|++....+++|.+-| +++|.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l~ 222 (423)
T TIGR00713 153 SGAATLGLPTSPGVPEDFAKLTLVLP-------YNDLEALEEVFEEY---GEEIAGVIVEPVAGNMGVVPPKPEFLAGLR 222 (423)
T ss_pred CcccccCCCCCCCCCcccccceEEeC-------CCCHHHHHHHHHHc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHH
Confidence 1100 111121 12899999988742 123456666544444788866 78999
Q ss_pred HHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccC
Q 038818 254 DIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKAS 333 (486)
Q Consensus 254 ~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~ 333 (486)
++|++||+++++|++|.++ .....+.....++ ..|.++ ..|.++.....|.++.+++ .. +.+.....+..
T Consensus 223 ~l~~~~~~llI~DEv~~g~-r~g~~~~~~~~~~-~pDi~t--~sK~l~~G~pig~v~~~~~-i~-~~~~~~~~~~~---- 292 (423)
T TIGR00713 223 ALTEEYGSLLIFDEVMTGF-RVALGGAQEYFGV-EPDLTT--LGKIIGGGLPVGAFGGRRE-IM-ERLAPEGPVYQ---- 292 (423)
T ss_pred HHHHHhCCEEEEEcccccc-ccCcchhHHHhCC-Ccchhh--hhhhhcCCCceeeeeEHHH-HH-HhhCcCCCeee----
Confidence 9999999999999999765 2211111111222 346544 6899886567888887643 22 22321100000
Q ss_pred CCCCccCCCCccccCCCCCCchHHHH---HHHHhchHH-HHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEee
Q 038818 334 DSKQVVDYKDWQITLSRRFRALKLWL---VLRSFGVAN-LRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVL 409 (486)
Q Consensus 334 ~~~~~~~~~~~~~~~sr~~~~l~~~~---~l~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~ 409 (486)
..+-....+.+.+ ++..+..++ ++...+....+.+.|.+.+++. ++..-......++.+.+.
T Consensus 293 -------------~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~g~~~~v~~~ 358 (423)
T TIGR00713 293 -------------AGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDT-GIPHTVNRVGSMFSLFFT 358 (423)
T ss_pred -------------ccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEeeccEEEEEEe
Confidence 0000122333333 444332222 3333333334444555555555 333211123345554443
Q ss_pred cCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 410 PSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
........ ...........++.+.+.++|++ +.+. +...+|++. ..++++|+++++.|.++++++
T Consensus 359 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~Gv~-v~~~---~~~~~~l~~---~~t~~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 359 EEEVTNYA-DAKKSDTELFAKFFHEMLDKGVF-LPPS---QFEACFLSA---AHTEEDIENTIEAAEEVFAEL 423 (423)
T ss_pred cCCCCChh-hhhcccHHHHHHHHHHHHHCCeE-EecC---CccceeeEC---CCCHHHHHHHHHHHHHHHhhC
Confidence 21100000 00000012344677788888864 4433 123467765 357789999999999887653
No 322
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.50 E-value=3.8e-11 Score=122.33 Aligned_cols=323 Identities=12% Similarity=0.110 Sum_probs=174.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHc
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIA 192 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 192 (486)
+...++.+.|++++.-+.+ ..+|+++||+|+..|+..||.....+ +..+ +..+|......|-...-+....
T Consensus 92 ~~~~~la~~L~~~~p~~~~-------~v~f~~sGseAve~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~gals~~ 162 (445)
T PRK09221 92 PLAFELAERLAELAPGGLD-------HVFFTNSGSESVDTALKIALAYHRAR-GQGT-RTRLIGRERGYHGVGFGGISVG 162 (445)
T ss_pred HHHHHHHHHHHHhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCccchhhhccC
Confidence 3445566778887642212 57899999999999999999764221 1111 2234444555553322222222
Q ss_pred CC-------C--CCCeEEEecCC-CCC--cc--------cCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----
Q 038818 193 GI-------D--PKNFRAIKTTK-SSS--FT--------LTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---- 248 (486)
Q Consensus 193 G~-------g--~~~v~~v~~d~-~~~--~~--------~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---- 248 (486)
|. + ...+..+|... ... +. -..++|++.++.. ....+.+|++....+..|.+-|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAavi~Epv~g~~G~~~~~~~y 240 (445)
T PRK09221 163 GIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALH--DASTIAAVIVEPMAGSAGVLVPPKGY 240 (445)
T ss_pred CChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEecccCCCCcccCCHHH
Confidence 21 0 01233444321 000 00 1235677766532 1134567888888888899888
Q ss_pred chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCccc
Q 038818 249 LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEF 327 (486)
Q Consensus 249 l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y 327 (486)
+++|.++|++||+++++|+++.|+.....-+.....++ ..|.+++ .|.++.. ++.|.++.+++ .. +.+...+.+
T Consensus 241 l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv-~PDi~~~--gK~l~gG~~Pi~av~~~~~-i~-~~~~~~~~~ 315 (445)
T PRK09221 241 LQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGV-TPDIITF--AKGLTNGAIPMGAVIASDE-IY-DAFMQGPEY 315 (445)
T ss_pred HHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCC-CCCEEEe--ccccccCcccceeeEEcHH-HH-HhhccCccc
Confidence 99999999999999999999866422111111111123 3576655 5777643 34677776643 32 233211111
Q ss_pred ccCccCCCCCccCCCCccccCCCCCCchHHH---HHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC--Cee
Q 038818 328 LRNKASDSKQVVDYKDWQITLSRRFRALKLW---LVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR--NFA 402 (486)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~--~~~ 402 (486)
...- ....|+. ...+.+. .+++.+-.+ ++.++..++.++|++.|+++.++..+.+. ..-
T Consensus 316 ~~~~---------~~~~T~~----~~pl~~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl 379 (445)
T PRK09221 316 AIEF---------FHGYTYS----AHPVACAAGLATLDIYREE---DLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGL 379 (445)
T ss_pred cccc---------ccccCCC----cCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhhccCCCEEEEecCce
Confidence 0000 0001111 2333333 344444223 45678888999999988775332222111 112
Q ss_pred EEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 403 VVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 403 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
+..+.+.+... .. .....++.+.+.++|+++ .. . ...+|++. ....|++|||++++.|+++++++
T Consensus 380 ~~~v~~~~~~~-------~~--~~~~~~~~~~~~~~Gv~~-~~---~-~~~lr~~P-pl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 380 VAGIELAPRPG-------AP--GARGYEAFMKCFEKGLLV-RY---T-GDTIALSP-PLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred EEEEEEecccc-------cc--cchHHHHHHHHHHCCeEE-ee---c-CCEEEEEC-CccCCHHHHHHHHHHHHHHHHhh
Confidence 23333332110 00 112346777788889753 22 1 24799987 45778899999999999998765
No 323
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.50 E-value=7.4e-11 Score=120.09 Aligned_cols=326 Identities=11% Similarity=0.102 Sum_probs=176.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHc
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIA 192 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 192 (486)
..+.++.+.+++++.-.- ....|+++||||+..|+..||...... +..+ +..+|......|-.-.-+....
T Consensus 89 ~~~~~la~~l~~~~p~~~-------~~v~f~~sGseA~e~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~gals~t 159 (442)
T PRK13360 89 PKAFELANRIAEIAPGGL-------NHVFFTNSGSESVDTALKIALAYHRAR-GEGS-RTRLIGRERGYHGVGFGGISVG 159 (442)
T ss_pred HHHHHHHHHHHHhCCCCC-------CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEEcCCcCCccHhhhhcc
Confidence 445566777888763111 157899999999999999999763211 1111 2233444444554322222222
Q ss_pred CC-------C--CCCeEEEecCCC-CC--cc--------cCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----
Q 038818 193 GI-------D--PKNFRAIKTTKS-SS--FT--------LTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---- 248 (486)
Q Consensus 193 G~-------g--~~~v~~v~~d~~-~~--~~--------~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---- 248 (486)
|. + ...+..+|.... .. +. -+.++|+++++.. .+..+.+|++.......|.+-|
T Consensus 160 g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~aavivEpi~g~~G~~~~~~~f 237 (442)
T PRK13360 160 GIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLH--DASTIAAVIVEPVAGSTGVLIPPKGY 237 (442)
T ss_pred CChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHHH
Confidence 21 0 112344543310 00 00 0246777777532 1234667888877888899888
Q ss_pred chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCccc
Q 038818 249 LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEF 327 (486)
Q Consensus 249 l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y 327 (486)
+++|.++|++||+++++|+++.|+.....-+.....++ ..|.+++ .|.++.. +++|.++.+++ .. +.+...+..
T Consensus 238 l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDivt~--gK~l~gG~~P~gav~~~~~-i~-~~~~~~~~~ 312 (442)
T PRK13360 238 LQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGV-TPDLLTC--AKGLTNGAIPMGAVFVSSE-IH-DAFMQGPEA 312 (442)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCC-CCceeee--eeccccCccceEEEEEcHH-HH-HHhhcCCcc
Confidence 99999999999999999999965422111111111233 4677655 7888754 45777777654 22 233211100
Q ss_pred ccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCC--eeEEE
Q 038818 328 LRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRN--FAVVC 405 (486)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~--~~~v~ 405 (486)
.. .-+...|+. +.+....++..+++.+-.+ ...++..++.++|++.|+++..+..+.+.. ..+..
T Consensus 313 ~~---------~~~~~~T~~-g~pl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~ 379 (442)
T PRK13360 313 GI---------EFFHGYTYS-GHPLACAAALATLDLYERE---GLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGA 379 (442)
T ss_pred cc---------ccccCCCCC-CCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEE
Confidence 00 000001111 1111222333344444333 356677788888888887643222221111 11223
Q ss_pred EEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 406 FRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 406 f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
+.+.+... .. .....++..++.++|++. ... ...+|++. ....|++|||++++.|+++++++
T Consensus 380 ~~l~~~~~-------~~--~~~~~~~~~~l~~~Gvl~-~~~----~~~lr~~P-pl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 380 VELAPRDG-------KP--GKRAYEVFLKCFEKGLMI-RYT----GDILALSP-PLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred EEEecCCC-------Cc--chhHHHHHHHHHHCCcEE-Eec----CCEEEEeC-CCccCHHHHHHHHHHHHHHHHHh
Confidence 33322110 00 122356677788889753 221 24699987 45678889999999999998765
No 324
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.50 E-value=2.4e-11 Score=123.54 Aligned_cols=314 Identities=11% Similarity=0.045 Sum_probs=171.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
...+.++.+++++++.-. + ..++++||++||..|+..++... + ++.+|......|-...-+...
T Consensus 89 ~~~~~~la~~L~~~~~~~-~-------~v~~~~sGseA~e~Aik~a~~~~-------g-~~~ii~~~~~yHG~t~~~~~~ 152 (426)
T PRK00062 89 TELEVELAELVIELVPSI-E-------MVRMVNSGTEATMSAIRLARGYT-------G-RDKIIKFEGCYHGHADSLLVK 152 (426)
T ss_pred CHHHHHHHHHHHHhCCCC-C-------EEEEecCHHHHHHHHHHHHHHHh-------C-CCeEEEEcCccCCchhhhhhc
Confidence 344556777888776311 1 57899999999999999998752 1 233444455555443222222
Q ss_pred cCCCC---------CCeE-----EEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHH
Q 038818 192 AGIDP---------KNFR-----AIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLC 253 (486)
Q Consensus 192 ~G~g~---------~~v~-----~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~ 253 (486)
.|-+. .... .+.+. ..|+++|++.++.. +..+.+|++.......|.+-| +++|.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~---~~~~aaiivEpv~~~~G~~~~~~~~l~~l~ 224 (426)
T PRK00062 153 AGSGAATLGLPDSPGVPEDFAKHTLTAP-----YNDLEAVEELFEEY---GDEIAAVIVEPVAGNMGVVPPKPGFLEGLR 224 (426)
T ss_pred cCccccccCCCCCCCCCcccccceEEcC-----CCCHHHHHHHHHhC---CCcEEEEEEeCCcCCCCCcCCCHHHHHHHH
Confidence 11100 0000 01111 23889999988642 223557777777777898888 99999
Q ss_pred HHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCC-cccccCcc
Q 038818 254 DIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTN-PEFLRNKA 332 (486)
Q Consensus 254 ~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~-~~y~~~~~ 332 (486)
++|++||+++++|++|.|+ .....+.....++ ..|.++ ..|.++..+++|.++.++ +.. +.+... ..+...
T Consensus 225 ~l~~~~~~llI~DEv~~G~-r~g~~~~~~~~~~-~pDi~~--~gK~l~~G~p~ga~~~~~-~i~-~~~~~~~~~~~~~-- 296 (426)
T PRK00062 225 ELCDEHGALLIFDEVMTGF-RVALGGAQGYYGV-TPDLTT--LGKIIGGGLPVGAFGGRR-EIM-EQLAPLGPVYQAG-- 296 (426)
T ss_pred HHHHHcCCEEEEeechhcc-ccCCccHHHHhCC-CcchHh--hhhHhhCCCcceeeeEHH-HHH-HhhccCCCceecc--
Confidence 9999999999999999765 2221111111122 245444 469888656678776653 332 233211 111110
Q ss_pred CCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhC----CCCeEEecCCCeeEEEEEe
Q 038818 333 SDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGG----DNRFEIVAPRNFAVVCFRV 408 (486)
Q Consensus 333 ~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~ 408 (486)
..++.+....++..++..+..+ +..++..++.+++++.|++ + ++..-......++.+.+
T Consensus 297 -------------T~~~~p~~~aaa~a~L~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~vrg~G~~~~i~l 359 (426)
T PRK00062 297 -------------TLSGNPLAMAAGLATLKLLKEP---GFYEELEALTKRLAEGLKEAAKKA-GIPLTVNRVGSMFGLFF 359 (426)
T ss_pred -------------cCcCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHc-CCceEEEEecceEEEEE
Confidence 0111112222333444444222 3556666677777777653 3 33321123345556555
Q ss_pred ecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 409 LPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
.+....... ............+.+.+.++|++ +.+.. ...++++ ...+++||+++++.|+++++++
T Consensus 360 ~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~Gv~-v~~~~---~~~~~~~---~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 360 TDEPVTNYA-DAKKSDTERFARFFHAMLDEGVY-LAPSQ---FEAGFVS---AAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred ecCCCcchh-hhccccHHHHHHHHHHHHHCCeE-eecCC---cCceeee---ccCCHHHHHHHHHHHHHHHHhh
Confidence 432100000 00000123345788888888974 44332 1235554 4668889999999999988764
No 325
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.50 E-value=6.4e-11 Score=120.87 Aligned_cols=315 Identities=12% Similarity=0.053 Sum_probs=177.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEE-ecCCCchHHHHHHHH
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVY-GSDQTHSALQKAAQI 191 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~a~~~ 191 (486)
....++.+.|+++++...+ ...|+++|||||..|+..||... ++..|+ .....|-...-+...
T Consensus 96 ~~~~~lae~L~~~~p~~~~-------~v~f~~SGsEA~e~AlklAr~~t---------gr~~ii~~~~~yHG~t~~a~s~ 159 (457)
T PRK05639 96 ERAIRVAEKLAEISPIENP-------KVLFGLSGSDAVDMAIKVSKFST---------RRPWILAFIGAYHGQTLGATSV 159 (457)
T ss_pred HHHHHHHHHHHhhCCCCcC-------EEEEeCchHHHHHHHHHHHHHhc---------CCCeEEEECCCcCCccHHHHHH
Confidence 3444566777887653222 57999999999999999998652 233343 344455443333333
Q ss_pred cCC--------C--CCCeEEEecCCCCC--cc----cCHH--------HHHHHHHHHHHCCCccEEEEeecCCccccccC
Q 038818 192 AGI--------D--PKNFRAIKTTKSSS--FT----LTPE--------SLQAAIDLDIQAGLIPLFLCATVGTTAITTVD 247 (486)
Q Consensus 192 ~G~--------g--~~~v~~v~~d~~~~--~~----~d~~--------~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id 247 (486)
.|. + ...+..+|...... +. -|.+ .|++.|......+..+..|++.-.....|.+-
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~ 239 (457)
T PRK05639 160 AAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVV 239 (457)
T ss_pred cCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcC
Confidence 331 1 12355565531100 00 1233 34443322111123456777777666667765
Q ss_pred C----chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcC
Q 038818 248 P----LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALST 323 (486)
Q Consensus 248 p----l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~ 323 (486)
| +++|.++|++||+++++|+++.|+.....-+....-++ ..|.+++ .|.++..++.|.++.+++- .. .+.
T Consensus 240 p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv~~--gK~l~gG~pi~av~~~~~i-~~-~~~- 313 (457)
T PRK05639 240 PPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEV-KPDLIIF--GKGVASGMGLSGVIGRKEL-MD-LTS- 313 (457)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCC-CCCEEEe--chhhcCCCcceeEEehHHH-Hh-hcC-
Confidence 4 89999999999999999999976422111111111244 5788884 7998876788888886542 11 111
Q ss_pred CcccccCccCCCCCccCCCCccccCCCCCCchHHHH---HHHHhchHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEecCC
Q 038818 324 NPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWL---VLRSFGVANLRNFLRSHVRMAQLFQELVGGD-NRFEIVAPR 399 (486)
Q Consensus 324 ~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~~~~~~ 399 (486)
..+. .+.....+.+.+ ++..+..+ +..++..++.++|++.|+++ .++.++...
T Consensus 314 -~~~~-------------------~T~~g~p~~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~V 370 (457)
T PRK05639 314 -GSAL-------------------LTPAANPVISAAAEATLEIIEEE---NLLKNALKVGEFIKKRLLEMKESFEVIGDV 370 (457)
T ss_pred -CCcc-------------------cCCCcCHHHHHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHHhCCCEEee
Confidence 0111 011123333333 34444332 45566677888888888653 122222221
Q ss_pred --CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 038818 400 --NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQE 477 (486)
Q Consensus 400 --~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~ 477 (486)
...++.+.+..+.. ....+....+.+.+.++|.+. .+.. .+...+|+.. ....|++|||+++++|++
T Consensus 371 rG~Gl~~gve~~~~~~--------~~~~~~~~~~~~~~~~~Gv~~-~~~g-~~~~~lr~~P-pl~it~~~id~~~~~l~~ 439 (457)
T PRK05639 371 RGKGLMIGVEIVKENG--------KPDPELTGKICWRAFELGLIL-PSYG-MFGNVIRITP-PLVITKEIAEKGLEIMER 439 (457)
T ss_pred ccceeEEEEEEecCCC--------CCCHHHHHHHHHHHHhCCeEE-eecC-CCCCEEEEeC-CCccCHHHHHHHHHHHHH
Confidence 22344444432210 001344567888888899753 3321 1246899988 467888999999999999
Q ss_pred HHHHHh
Q 038818 478 KLDGIL 483 (486)
Q Consensus 478 ~~~~l~ 483 (486)
+++.+.
T Consensus 440 ~l~~~~ 445 (457)
T PRK05639 440 AIKDAL 445 (457)
T ss_pred HHHHHH
Confidence 987765
No 326
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.49 E-value=5e-11 Score=121.37 Aligned_cols=314 Identities=11% Similarity=0.068 Sum_probs=173.3
Q ss_pred HHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCC
Q 038818 115 ENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGI 194 (486)
Q Consensus 115 e~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~ 194 (486)
..++.++++++.+.+.. ...+++++|++|+..|+..+|... + ++.+|.++...|-...-+....+-
T Consensus 86 ~~~la~~l~~~~~~~~~------~~~~f~~sGsea~e~Alklar~~~-------~-r~~iv~~~~~yHG~~~~~~~~~~~ 151 (425)
T PRK08088 86 YLELCEKMNQKVPGDFA------KKTLLVTTGSEAVENAVKIARAAT-------K-RSGVIAFTGAYHGRTHYTLALTGK 151 (425)
T ss_pred HHHHHHHHHHhCCCCCC------CEEEEeCCcHHHHHHHHHHHHHHh-------C-CCeEEEECCccCCccHHHHHhhCC
Confidence 34677888887764321 156889999999999999998752 1 334555566666554443333221
Q ss_pred --------C--CCCeEEE--ecCCCCCcccC----HHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHH
Q 038818 195 --------D--PKNFRAI--KTTKSSSFTLT----PESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCD 254 (486)
Q Consensus 195 --------g--~~~v~~v--~~d~~~~~~~d----~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~ 254 (486)
+ ...+..+ |.+. + .++ ++.|+++++... .+..+.+|++.......|.+-| +++|.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~p~~~--~-~~~~~~~~~~l~~~l~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~ 227 (425)
T PRK08088 152 VNPYSAGMGLMPGHVYRALYPCPL--H-GVSEDDAIASIERIFKNDA-APEDIAAIIIEPVQGEGGFYAASPAFMQRLRA 227 (425)
T ss_pred CCccccCCCCCCCCcEEcCCCccc--c-CccHHHHHHHHHHHHHhcc-CCCceEEEEECcccCCCCCcCCCHHHHHHHHH
Confidence 0 1112222 2221 1 122 556887775321 2234556777766666676655 999999
Q ss_pred HHHHhCceEEeeccccchhccCccchhh-hcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccC
Q 038818 255 IAKRYSIWVHVDAAYAGSACICPEFRHF-IDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKAS 333 (486)
Q Consensus 255 i~~~~g~~lhvD~a~g~~~~~~~~~~~~-~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~ 333 (486)
+|++||+++++|.+|++.... ...... ..++ ..|. .+..|.++..+..|+++.+.+ .. +.+... .+
T Consensus 228 l~~~~~~~lI~Dev~~g~g~~-g~~~~~~~~~~-~pdi--~s~sK~l~~G~rig~v~~~~~-~~-~~~~~~-~~------ 294 (425)
T PRK08088 228 LCDEHGIMLIADEVQTGAGRT-GTLFAMEQMGV-AADL--TTFAKSIAGGFPLAGVTGRAE-VM-DAIAPG-GL------ 294 (425)
T ss_pred HHHHcCCEEEEeccccCCCcC-cchhHHhhcCC-CCCE--EEEeccccCCCcceeeEecHH-HH-hhcCCC-CC------
Confidence 999999999999999863221 111110 1121 2443 456899987677888887543 22 222110 00
Q ss_pred CCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHh----CCCCeEEecCCCeeEEEEEee
Q 038818 334 DSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVG----GDNRFEIVAPRNFAVVCFRVL 409 (486)
Q Consensus 334 ~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~----~~~~~~~~~~~~~~~v~f~~~ 409 (486)
..+-....+...+++..+..-..+++.++..++.+++.+.|. ..|.+.-+..+ ..++.+.+.
T Consensus 295 -------------~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~-G~~~~l~l~ 360 (425)
T PRK08088 295 -------------GGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGL-GAMIAIELF 360 (425)
T ss_pred -------------CCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEecc-ceEEEEEEe
Confidence 000012333333333333221223444555555555555553 34443323222 344555553
Q ss_pred cCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 410 PSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
.+.. ..........++.+.+.+.|+.+.+...+ ...+|+++. ...++++|++.++.|.++++.+
T Consensus 361 ~~~~------~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~--~~~iRl~~~-~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 361 EDGD------HSKPNAKLTAQIVARARDKGLILLSCGPY--YNVLRILVP-LTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred cCCC------CCCCCHHHHHHHHHHHHhCCCEEecCCCC--CCEEEEECC-CCcCHHHHHHHHHHHHHHHHhh
Confidence 2110 00001344567888888899765432222 367999983 4677889999999999988653
No 327
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.49 E-value=3.8e-10 Score=114.68 Aligned_cols=313 Identities=15% Similarity=0.066 Sum_probs=172.6
Q ss_pred HHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcC
Q 038818 114 LENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAG 193 (486)
Q Consensus 114 le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G 193 (486)
.+.++.+.|.+++.-... ...+|+++||+|+..|+..||... | ++.+|......|-...-+....|
T Consensus 77 ~~~~la~~l~~~~p~~~~------~~v~f~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~~~~~~ 142 (420)
T TIGR00700 77 GYVALAEKLNRIAPGSGP------KKSVFFNSGAEAVENAVKIARSYT-------G-RPGVVAFDHGFHGRTNMTMALTA 142 (420)
T ss_pred HHHHHHHHHHHhCCCCCC------CEEEEeCCcHHHHHHHHHHHHHhc-------C-CCcEEEECCCcCCCcHHHHHhcC
Confidence 344556777777632111 157899999999999999998762 1 22344455555644333333322
Q ss_pred --------CC--CCCeEEEecCCCC---------CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----ch
Q 038818 194 --------ID--PKNFRAIKTTKSS---------SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LG 250 (486)
Q Consensus 194 --------~g--~~~v~~v~~d~~~---------~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~ 250 (486)
.+ ...+..+|..... .+.-+++.+++.+.... .+..+..|++.-....+|.+-| ++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavi~Epi~g~~G~~~~~~~~l~ 221 (420)
T TIGR00700 143 KVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDV-GANNVAALVIEPVQGEGGFIVPAKGFVP 221 (420)
T ss_pred CCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhc-CCCcEEEEEECCccCCCCCccCCHHHHH
Confidence 11 1134444442100 00112556777664221 2234667888777777787765 89
Q ss_pred HHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccC
Q 038818 251 PLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRN 330 (486)
Q Consensus 251 ~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~ 330 (486)
+|.++|++||+++++|+++.++.....-+.....++ ..|.++ ..|.++..+..|+++.+++ .. +.+.. ...
T Consensus 222 ~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~-~pDi~~--lsK~l~~G~pig~v~~~~~-i~-~~~~~--~~~-- 292 (420)
T TIGR00700 222 ALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGP-EPDLIT--TAKSLADGLPLSGVTGRAE-IM-DAPAP--GGL-- 292 (420)
T ss_pred HHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCC-CCCEEE--eeccccCCcceEEEEecHH-HH-hhcCC--CCc--
Confidence 999999999999999999977533221111001122 467655 6899987788899887643 22 22211 000
Q ss_pred ccCCCCCccCCCCccccCCCCCCchHHHHH---HHHhchHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEecCCCeeE
Q 038818 331 KASDSKQVVDYKDWQITLSRRFRALKLWLV---LRSFGVANLRNFLRSHVRMAQLFQELV----GGDNRFEIVAPRNFAV 403 (486)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~---l~~~g~~g~~~~~~~~~~~a~~l~~~L----~~~~~~~~~~~~~~~~ 403 (486)
..+-....+.+.++ +..+..+.+. ++..++.+++++.| +++|.+..+. +...+
T Consensus 293 ----------------~~T~~~~pl~~aaa~a~l~~l~~~~~~---~~~~~~g~~l~~~L~~l~~~~~~~~~vr-g~G~~ 352 (420)
T TIGR00700 293 ----------------GGTYAGNPLACAAALAVLAIIESEGLI---ERARQIGRLVTDRLTTLKAVDPRIGDVR-GLGAM 352 (420)
T ss_pred ----------------CCCCCcCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHHHhhCCCEEEee-ccceE
Confidence 00111234444444 4444333433 33444444454444 3344443332 23445
Q ss_pred EEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 404 VCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 404 v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
+.+.+.+... .........++.+.+.++|+++.+...+ ..++|+++. ...++++|+++++.|.++++
T Consensus 353 ~~i~~~~~~~-------~~~~~~~~~~l~~~~~~~Gv~i~p~~~f--~~~lRl~p~-l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 353 IAVELVDPGT-------TEPDAGLAERIATAAHAAGLLLLTCGMF--GNIIRFLPP-LTIGDELLSEGLDILCAILA 419 (420)
T ss_pred EEEEEecCCC-------CCccHHHHHHHHHHHHHCCeEEeccCCC--CCEEEEECC-CCcCHHHHHHHHHHHHHHhh
Confidence 5555532210 0011345677888888899865433222 258999873 34678899999999988763
No 328
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.48 E-value=5e-11 Score=121.78 Aligned_cols=311 Identities=11% Similarity=0.011 Sum_probs=173.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
...+.++.+.+++++.. .+ ...|+++||||+..|+..||... | ++.+|......|-........
T Consensus 138 ~~~~~~lAe~l~~~~p~-~~-------~v~f~~SGsEA~e~AlklAR~~t-------g-r~~Ii~~~g~YHG~~~~~~~~ 201 (474)
T PLN02482 138 CLLENVLAEMVIDAVPS-VE-------MVRFVNSGTEACMGVLRLARAYT-------G-REKIIKFEGCYHGHADSFLVK 201 (474)
T ss_pred CHHHHHHHHHHHHhCCC-CC-------EEEEeCChHHHHHHHHHHHHHhc-------C-CCEEEEECCccCCCcchhhhh
Confidence 45666777888888742 12 57999999999999999999762 1 222333344444322111111
Q ss_pred c--C-----------CCC---CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chH
Q 038818 192 A--G-----------IDP---KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGP 251 (486)
Q Consensus 192 ~--G-----------~g~---~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~ 251 (486)
. | ++. ..+..+|. -|+++|++.|+.. +..+.+|++.......|.+-| +++
T Consensus 202 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------nd~~~l~~~l~~~---~~~iAavI~Epv~g~~G~i~p~~~fl~~ 271 (474)
T PLN02482 202 AGSGVATLGLPDSPGVPKAATSATLTAPY-------NDLEAVKKLFEAN---KGEIAAVILEPVVGNSGFIVPKKEFLEG 271 (474)
T ss_pred cCCCccccCCCCCCCCCCCCCCCeEEecC-------CChHHHHHHHHhC---CCceEEEEECCCCCCCCCcCCCHHHHHH
Confidence 1 1 100 01222221 2789999988642 234567888877777888876 568
Q ss_pred HHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCc
Q 038818 252 LCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNK 331 (486)
Q Consensus 252 I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~ 331 (486)
|.++|++||+.+++|+++.|+ .....+....-++ ..|.+++ -|.+++.+++|.+..+++ .. +.+.....+..
T Consensus 272 lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv-~PDi~t~--gK~lggG~Pigav~g~~e-i~-~~~~~~~~~~~-- 343 (474)
T PLN02482 272 LREITKENGALLVFDEVMTGF-RIAYGGAQEYFGI-TPDLTTL--GKVIGGGLPVGAYGGRRE-IM-EMVAPAGPMYQ-- 343 (474)
T ss_pred HHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCC-CCCEEEe--cchhhCCCceEEEEEcHH-HH-HhhccCCCccc--
Confidence 999999999999999999665 2221111111233 4677665 799987778899876543 32 23321111110
Q ss_pred cCCCCCccCCCCccccCCCCCCchHH---HHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC---CeEEecCCCeeEEE
Q 038818 332 ASDSKQVVDYKDWQITLSRRFRALKL---WLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDN---RFEIVAPRNFAVVC 405 (486)
Q Consensus 332 ~~~~~~~~~~~~~~~~~sr~~~~l~~---~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~v~ 405 (486)
..+-...++.+ ..+|..+.. .+..++..++.++|++.|+++- ++.++.....+++.
T Consensus 344 ---------------~~T~~gnpl~~aAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~g 405 (474)
T PLN02482 344 ---------------AGTLSGNPLAMTAGIHTLKRLQQ---PGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGMFG 405 (474)
T ss_pred ---------------ccCcchhHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceEEE
Confidence 01111233333 334444432 2466777778888888886541 23332112223554
Q ss_pred EEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 406 FRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 406 f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
+.+.......... ..........++.+.|.++|++ +.+.... . ++ .+...|++|||+++++++++++++
T Consensus 406 i~f~~~~~~~~~~-~~~~d~~~~~~~~~~l~~~Gv~-~~~~~~~-~---~~--psl~ht~~dId~~l~al~~~l~~~ 474 (474)
T PLN02482 406 FFFTEGPVYNFAD-AKKSDTAKFARFHRGMLEEGVY-LAPSQFE-A---GF--TSLAHTEEDIDFTIAAAERVLARI 474 (474)
T ss_pred EEEecCCccChhh-hccCCHHHHHHHHHHHHHCCeE-EeccCCC-C---Cc--CCCCCCHHHHHHHHHHHHHHHHhC
Confidence 4443211000000 0000123445678888888974 3332111 1 11 245668889999999999988754
No 329
>PRK05965 hypothetical protein; Provisional
Probab=99.48 E-value=2e-10 Score=117.46 Aligned_cols=336 Identities=11% Similarity=0.063 Sum_probs=183.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.....++.+.|++++.-+. ...+|+++||||+..|+.+||...... |..+ +..+|......|-...-+...
T Consensus 89 ~~~~~~lae~L~~~~p~~~-------~~v~f~~sGSEAve~AlKlAr~~~~~~-g~~~-r~kii~~~~~YHG~t~~a~s~ 159 (459)
T PRK05965 89 SEPAIRLAAKLAERAPGSL-------NHVYFTLGGSDAVDSAVRFIRHYWNAT-GRPS-KKQFISLERGYHGSSSVGAGL 159 (459)
T ss_pred CHHHHHHHHHHHhhCCCCc-------CEEEEeCChhHHHHHHHHHHHHHHHhc-CCCC-ccEEEEecCCcCcccHHHHHh
Confidence 3444566677777763221 257899999999999999999764221 1111 223444554556443323333
Q ss_pred cCC-------C--CCCeEEEecCCC--CCcccC--------HHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----
Q 038818 192 AGI-------D--PKNFRAIKTTKS--SSFTLT--------PESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---- 248 (486)
Q Consensus 192 ~G~-------g--~~~v~~v~~d~~--~~~~~d--------~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---- 248 (486)
.|. + ...+..+|.... ..+.-| +++|++.|+.. ....+..|++.-.....|.+-|
T Consensus 160 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAAvIvEPiqg~gG~~~p~~~y 237 (459)
T PRK05965 160 TALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAEL--GADNVAAFFCEPIQGSGGVIVPPKGW 237 (459)
T ss_pred cCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEeccccCCCCccCCHHH
Confidence 221 1 122344443210 001123 25677777532 1134566777766666676644
Q ss_pred chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcCCccc
Q 038818 249 LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALSTNPEF 327 (486)
Q Consensus 249 l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~~~~y 327 (486)
+++|.++|++||+.|++|+.+.|+.....-+....-++ ..|.+++ -|.++..+ +.|.++++++- . +.+......
T Consensus 238 l~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~~i-~-~~~~~~~~~ 312 (459)
T PRK05965 238 LKAMREACRELGILFVADEVITGFGRTGPLFACEAEGV-VPDLMTV--AKGLTSGYVPMGAVLMSDHV-Y-QGIADGAGA 312 (459)
T ss_pred HHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCC-CCCeEEe--chhhccCCcceeEEEEcHHH-H-HHHhccccc
Confidence 89999999999999999999877633221111111233 5788887 58888774 78888887652 2 223211000
Q ss_pred ccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC--CeeEEE
Q 038818 328 LRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR--NFAVVC 405 (486)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~--~~~~v~ 405 (486)
.. .+....+-...++++.++++.+-.---++..++..++.++|.+.|+++....++... ...++.
T Consensus 313 ~~-------------~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~g 379 (459)
T PRK05965 313 AA-------------PVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGA 379 (459)
T ss_pred cc-------------cccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEE
Confidence 00 000011112334444444444311111245677788888888888764222222111 123344
Q ss_pred EEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 406 FRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 406 f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
+.+....... ++ .........++.+.+.++|.++ .+ .+..++|++. ....+++|||++++.|.++++++.+
T Consensus 380 ie~~~~~~~~-~~--~~~~~~~~~~i~~~~~~~Gll~-~~---~g~~~i~~~P-pL~it~~ei~~~~~~l~~~l~~~~~ 450 (459)
T PRK05965 380 LELVADKATK-TP--FDAALDPADRIFDRAYANGLVF-RA---FGDGVLGFAP-ALCCTEGEFDLIFERTRKTLDDVLA 450 (459)
T ss_pred EEEecccccc-CC--CCchhHHHHHHHHHHHhCCeEE-Ee---cCCcEEEEEC-CCcCCHHHHHHHHHHHHHHHHHHhc
Confidence 4443211000 00 0001234567788888899754 22 2345789886 4567889999999999999987653
No 330
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.47 E-value=9.7e-11 Score=112.18 Aligned_cols=332 Identities=12% Similarity=0.125 Sum_probs=203.8
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCch
Q 038818 104 NWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHS 183 (486)
Q Consensus 104 ~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~ 183 (486)
.|..+.+..++-..+.+.....+..+... ..+.++|+|.|.+...++.++++ .++.|++...++.
T Consensus 95 QYg~s~G~peLl~fik~h~~~~ih~p~~~----~wdiiit~G~t~~l~~~l~~~~N-----------~gd~vlie~~ty~ 159 (472)
T KOG0634|consen 95 QYGQSSGIPELLLFIKDHNRPTIHAPPYK----NWDIIITNGNTDGLFKVLRTLIN-----------RGDHVLIEEYTYP 159 (472)
T ss_pred ccccccCcHHHHHHHHHhccccccCCCCC----CceEEEecCCchHHHHHHHHhhc-----------CCCceEEecccch
Confidence 45555566666665555444344444321 13789999999999999999988 6778999999999
Q ss_pred HHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHC--C-CccEEEEee--cCCccccccCCc---hHHHHH
Q 038818 184 ALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQA--G-LIPLFLCAT--VGTTAITTVDPL---GPLCDI 255 (486)
Q Consensus 184 s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~--g-~~p~~vv~~--~gtt~~G~idpl---~~I~~i 255 (486)
+-...++.+|+ +++.|+.|.+ .+++|.|++.+..-.-. + ..|- |..| .|.|+||..-.+ ++|.+|
T Consensus 160 ~AL~s~~a~gv---~~ipv~md~~---Gi~pE~l~~il~~w~~~~~k~~~p~-vlYTIPTgqNPTG~tls~errk~iy~L 232 (472)
T KOG0634|consen 160 SALQSMEALGV---KIIPVKMDQD---GIDPESLEEILSNWKPGSYKKPKPH-VLYTIPTGQNPTGNTLSLERRKKIYQL 232 (472)
T ss_pred HHHHhccccCc---eEEeccccCC---CCCHHHHHHHHhcCCcccccCCCCe-EEEeCcCCCCCCCCccCHHHHHHHHHH
Confidence 98899999999 9998888753 79999999998754321 1 2353 4444 478999987554 699999
Q ss_pred HHHhCceEEeeccccchhccC---------ccch------hhhcCCC--CCC--ceeec-cccccCCCCcceEEEeeCch
Q 038818 256 AKRYSIWVHVDAAYAGSACIC---------PEFR------HFIDGIE--GAD--SFSLN-AHKWFFTTLDCCCLWVKNPN 315 (486)
Q Consensus 256 ~~~~g~~lhvD~a~g~~~~~~---------~~~~------~~~~~~~--~aD--si~~~-~hK~l~~p~~~g~~~~~~~~ 315 (486)
|++|++.++.|..|.-..+.. +.+. .+....- ..| .|..+ +.|.+....-.|++.....
T Consensus 233 ArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~- 311 (472)
T KOG0634|consen 233 ARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSL- 311 (472)
T ss_pred HHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHH-
Confidence 999999999999985433221 1111 0111110 111 22222 4677765555665544332
Q ss_pred HHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHH----HHHHHHHHHHhC-C
Q 038818 316 ALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHV----RMAQLFQELVGG-D 390 (486)
Q Consensus 316 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~----~~a~~l~~~L~~-~ 390 (486)
.+.+.+.. .+.+.+.-..+...-++..++.+|.+|+.+.+.+.. ..++.+...|.+ +
T Consensus 312 ~l~ril~~------------------ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kyl 373 (472)
T KOG0634|consen 312 FLKRILDL------------------AEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYL 373 (472)
T ss_pred HHHHHhhh------------------cceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 22222110 011111111234466788889999988776665544 456666666654 4
Q ss_pred CCe-EEecCCCeeEEEE-EeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeE------C-CEeEEEEEecCC
Q 038818 391 NRF-EIVAPRNFAVVCF-RVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMV------A-GIYFIRFAVGAT 461 (486)
Q Consensus 391 ~~~-~~~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~------~-~~~~lR~~~~~~ 461 (486)
|.- ..+.+|..+++.+ .+.-... ......++..+.+...+.+.|+..+.+..+ . ++-++|+++.
T Consensus 374 p~~~~~~~~P~aGmFiwv~i~~~~~-----~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a-- 446 (472)
T KOG0634|consen 374 PKSVCEYHPPKAGMFIWVEIPYINF-----DTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIA-- 446 (472)
T ss_pred CCCeeEEecCCcceEEEEEeccccc-----ccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEee--
Confidence 432 3334666666544 4431100 012334555566777888899865555432 1 2349999994
Q ss_pred CCcHHHHHHHHHHHHHHHHHHh
Q 038818 462 LTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 462 ~tt~~did~~i~~l~~~~~~l~ 483 (486)
..+.+++++.++.+..++++-.
T Consensus 447 ~a~~e~l~~g~~rf~~~ike~f 468 (472)
T KOG0634|consen 447 FAEPEKLDEGIERFGSVIKEHF 468 (472)
T ss_pred cCCHHHHHHHHHHHHHHHHHHh
Confidence 5566688888888887776544
No 331
>PRK06062 hypothetical protein; Provisional
Probab=99.47 E-value=1.6e-10 Score=118.01 Aligned_cols=317 Identities=10% Similarity=0.020 Sum_probs=176.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.+...++.+.|+++..-.-+ ..+|+++||+|+..|+..||... + +..+|......|-...-+...
T Consensus 94 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGsEAve~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~als~ 158 (451)
T PRK06062 94 NDARSEAARLIAERAPGDLS-------KVFFTNGGADANEHAVRMARLHT-------G-RPKVLSAYRSYHGGTGSAINL 158 (451)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEcCChHHHHHHHHHHHHHhh-------C-CceEEEEeCCCCCCCHHHHhh
Confidence 44455666778887642212 57999999999999999998762 1 233444444455444344433
Q ss_pred cCCC--------CCCeEEEecCCCCCcc------cC-------HHHHHHHHHHHHHCCCccEEEEeecCCccccccCC--
Q 038818 192 AGID--------PKNFRAIKTTKSSSFT------LT-------PESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP-- 248 (486)
Q Consensus 192 ~G~g--------~~~v~~v~~d~~~~~~------~d-------~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp-- 248 (486)
.|.. ...+..++... .++ .| +++|+++|+.. ....+.+|++.......|.+-|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAaviiEPv~g~gG~~~p~~ 234 (451)
T PRK06062 159 TGDPRRWPNDTGRAGVVHFFGPF--LYRSEFHATTEEEECERALAHLERVIELE--GPSTIAAILLESVPGTAGILVPPP 234 (451)
T ss_pred cCCcccccCCCCCCCCEEeCCCC--ccccccCCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCH
Confidence 3321 01223333221 111 12 67778877531 1234567788777777788888
Q ss_pred --chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcCCc
Q 038818 249 --LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALSTNP 325 (486)
Q Consensus 249 --l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~~~ 325 (486)
+++|.++|++||+.|++|+++.|+.....-+.....++ ..|.+++ -|.++..+ +.|.++.+++ .. +.+.. .
T Consensus 235 ~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv-~PDi~t~--gK~lggG~~Pigav~~~~~-i~-~~~~~-~ 308 (451)
T PRK06062 235 GYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGV-VPDLITF--AKGVNSGYVPLGGVAISEA-IA-ATFAD-R 308 (451)
T ss_pred HHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCC-CCCeeee--chhhhcCCcCcEEEEEcHH-HH-HHhcc-C
Confidence 99999999999999999999987432211111111244 5787765 79888764 6888888763 32 33321 1
Q ss_pred ccccCccCCCCCccCCCCccccCCCCCCchHHHH---HHHHhchHHHHHHHHHHHHHH-HHHHHHHhC----CCCe-EEe
Q 038818 326 EFLRNKASDSKQVVDYKDWQITLSRRFRALKLWL---VLRSFGVANLRNFLRSHVRMA-QLFQELVGG----DNRF-EIV 396 (486)
Q Consensus 326 ~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~---~l~~~g~~g~~~~~~~~~~~a-~~l~~~L~~----~~~~-~~~ 396 (486)
.+... .+-...++.+.+ ++..+-.+. ..++..++. ++|++.|++ .|.+ .+-
T Consensus 309 ~~~~~-----------------~T~~gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vr 368 (451)
T PRK06062 309 PYPGG-----------------LTYSGHPLACAAAVATINAMEEEG---IVENAARIGAEVLGPGLRELAERHPSVGEVR 368 (451)
T ss_pred CCCCC-----------------CCCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhcCCcEEeEe
Confidence 11100 011122333333 444443332 445555555 355555544 3322 222
Q ss_pred cCCCeeEEEEEeecCCC-CCC-CCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHH
Q 038818 397 APRNFAVVCFRVLPSAS-GLG-DGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKV 474 (486)
Q Consensus 397 ~~~~~~~v~f~~~~~~~-~~~-~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~ 474 (486)
+. ..++.+.+..+.. +.. +. .........++.+.+.++|++. .+ . ...+|++. ....|++|||+++++
T Consensus 369 G~--Gl~~gve~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~Gvl~-~~---~-~~~lrl~p-pl~~t~~eid~~~~~ 438 (451)
T PRK06062 369 GL--GVFWALELVADRETREPLAP--YGASSAAMAAVKAACKERGLLP-FV---N-GNRIHVVP-PCTVTEDEVREGLAI 438 (451)
T ss_pred cc--ccEEEEEEcccccccCCCcc--cchhhHHHHHHHHHHHHCCcEE-ee---c-CCEEEEEC-CccCCHHHHHHHHHH
Confidence 11 2344444432110 000 00 0000234567888888999753 22 1 24689876 346788999999999
Q ss_pred HHHHHHHHh
Q 038818 475 VQEKLDGIL 483 (486)
Q Consensus 475 l~~~~~~l~ 483 (486)
++++++.+-
T Consensus 439 l~~~l~~~~ 447 (451)
T PRK06062 439 LDAALAVAD 447 (451)
T ss_pred HHHHHHHhh
Confidence 999987654
No 332
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.47 E-value=1.9e-10 Score=117.46 Aligned_cols=326 Identities=13% Similarity=0.047 Sum_probs=178.4
Q ss_pred HHHHHHHHHHHHHHcCCCC-CCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPK-SFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ 190 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~-~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 190 (486)
++...++.+.|++++.... .. ...+++++||||+..|+..||... | ++.+|......|-...-+..
T Consensus 81 ~~~~~~lae~L~~~~p~~~~~~-----~~~f~~~sGsEA~e~AlklAr~~t-------g-r~~Ii~~~~~yHG~t~~~~s 147 (442)
T TIGR00709 81 TPLKDAFIEALLNIIPKRKMDY-----KLQFPGPSGADAVEAAIKLAKTYT-------G-RTNVISFSGGFHGMTIGALA 147 (442)
T ss_pred cHHHHHHHHHHHHhCCCcCCCc-----cEEEeCCCHHHHHHHHHHHHHHhc-------C-CCeEEEEcCCcCCchHHHHh
Confidence 4455566788888874321 11 123556899999999999999762 1 23344455556655444444
Q ss_pred HcCC---------CCCCeEEEecCCCCCccc--------CHHHHHHHHHHHH----HCCCccEEEEeecCCccccccCC-
Q 038818 191 IAGI---------DPKNFRAIKTTKSSSFTL--------TPESLQAAIDLDI----QAGLIPLFLCATVGTTAITTVDP- 248 (486)
Q Consensus 191 ~~G~---------g~~~v~~v~~d~~~~~~~--------d~~~L~~~l~~~~----~~g~~p~~vv~~~gtt~~G~idp- 248 (486)
..|. ....+..+|... ..+. +.+.+.+.+++.. .....+..|++.......|.+-|
T Consensus 148 ~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~ 225 (442)
T TIGR00709 148 VTGNLFAKNAVGMLMPGVQFMPYPH--EYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAP 225 (442)
T ss_pred hcCChhhhccCCCCCCCcEEeCCCc--cccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCC
Confidence 4331 011344444421 1121 2233333232221 11123556777766666676632
Q ss_pred ---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCc
Q 038818 249 ---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNP 325 (486)
Q Consensus 249 ---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~ 325 (486)
+++|.++|++||+++++|+++.|+.....-+.....++ ..|.+++ .|.++..++.|.++.+++ . . .+. +
T Consensus 226 ~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~~G~Pigav~~~~~-~-~-~~~--~ 297 (442)
T TIGR00709 226 SEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGI-EPDFVVM--SKAVGGGLPLAVLLIAPE-F-D-AWQ--P 297 (442)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCC-CCcEEEE--cccccCCcccEEEEEchH-H-h-ccC--C
Confidence 89999999999999999999977543221111111233 4688884 788887788999998765 2 2 221 1
Q ss_pred ccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHH---hchHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEecCC--
Q 038818 326 EFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRS---FGVANLRNFLRSHVRMAQLFQELVGGDN-RFEIVAPR-- 399 (486)
Q Consensus 326 ~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~---~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~-- 399 (486)
... ..+-...++++.+++.. +..+ ++.++..++.++|.+.|+++. ...++...
T Consensus 298 ~~~------------------~~T~~gnpla~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG 356 (442)
T TIGR00709 298 AGH------------------TGTFRGNQLAMVTGTEALNYWKDD---NLAQNAQERGERITSFLDDMIKEHPCIGNVRG 356 (442)
T ss_pred CcC------------------CCCCCcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeec
Confidence 000 00111233444444443 3333 445667777777777776531 12222221
Q ss_pred CeeEEEEEeecCCC-CCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 400 NFAVVCFRVLPSAS-GLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 400 ~~~~v~f~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
...++.+.+..+.. +..... .........++...+.++|.+ +.+... ....+|+.. ....|++|||+++++++++
T Consensus 357 ~Gl~~~ie~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Gvl-~~~~~~-~~~~l~~~P-pl~it~~ei~~~~~~l~~~ 432 (442)
T TIGR00709 357 RGLMQGIMIVDERQSKDATGA-YPRDCELAAAIQGACFENGLL-LETGGR-EGEVFRLLC-PITIDQEECEEGISRFKQA 432 (442)
T ss_pred cceEEEEEEccCccccccccc-CCcchHHHHHHHHHHHHCCeE-EeecCC-CCCEEEEEC-CCCCCHHHHHHHHHHHHHH
Confidence 22344554432210 000000 000123456778888888975 332211 245789887 4678899999999999999
Q ss_pred HHHHhhc
Q 038818 479 LDGILAT 485 (486)
Q Consensus 479 ~~~l~~~ 485 (486)
++++.+|
T Consensus 433 l~~~~~~ 439 (442)
T TIGR00709 433 VEEALAE 439 (442)
T ss_pred HHHHHHH
Confidence 9887664
No 333
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.47 E-value=4.7e-10 Score=113.84 Aligned_cols=315 Identities=13% Similarity=0.055 Sum_probs=174.1
Q ss_pred HHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcC
Q 038818 114 LENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAG 193 (486)
Q Consensus 114 le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G 193 (486)
...++.+.|++++..+.. ...+|+++||+|+..|+..||... + ++.+|......|-...-+....|
T Consensus 84 ~~~~la~~l~~~~p~~~~------~~~~f~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~~s~t~ 149 (421)
T PRK06777 84 SYVTLAERINALAPIDGP------AKTAFFTTGAEAVENAVKIARAYT-------G-RPGVIAFGGAFHGRTLLTMALTG 149 (421)
T ss_pred HHHHHHHHHHHhCCCCCC------ceEEEeCCcHHHHHHHHHHHHHhh-------C-CCeEEEEcCCcCCccHHHHhhcC
Confidence 344556777777643211 157889999999999999998752 1 22234344445544333433333
Q ss_pred C--------C--CCCeEEEecCCCCC---cccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc-CC---chHHHHHH
Q 038818 194 I--------D--PKNFRAIKTTKSSS---FTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV-DP---LGPLCDIA 256 (486)
Q Consensus 194 ~--------g--~~~v~~v~~d~~~~---~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i-dp---l~~I~~i~ 256 (486)
. + ...+..+|...... ..-+++.+++.+++.. .+..+.+|++.......|.. -| +++|.++|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~-~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc 228 (421)
T PRK06777 150 KVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADI-APDQVAAILLEPIQGEGGFNVAPPEFMSALRTLC 228 (421)
T ss_pred CCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHHHHH
Confidence 1 0 11233333321000 0124667787775321 12335567777666666743 33 89999999
Q ss_pred HHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCC
Q 038818 257 KRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSK 336 (486)
Q Consensus 257 ~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 336 (486)
++||+++++|+++.++......+.....++ ..|.++ ..|.++..+..|.++.+++ .. +.+... ...
T Consensus 229 ~~~g~llI~DEv~tg~gr~g~~~~~~~~~~-~pDiv~--~sK~l~~G~pigav~~~~~-i~-~~~~~~--~~~------- 294 (421)
T PRK06777 229 DEHGILLIADEVQTGFARTGKLFAMEYYDV-KPDLIT--MAKSLGGGMPISAVVGRAE-VM-DAPAPG--GLG------- 294 (421)
T ss_pred HHcCCEEEEechhhCCccCCchhhhhhcCC-CCCEEe--eehhhcCCCceEEEEEcHH-HH-hccCCC--CCC-------
Confidence 999999999999986432111111001122 466554 5798886677888887643 22 222110 000
Q ss_pred CccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC----CCeEEecCCCeeEEEEEeecCC
Q 038818 337 QVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGD----NRFEIVAPRNFAVVCFRVLPSA 412 (486)
Q Consensus 337 ~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~~~~~~ 412 (486)
.+. ....+.+.+++..+..-.-.++.++..++.++|++.|+++ |.+.-+ .+...++.+.+..+.
T Consensus 295 -------~T~----~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v-rg~G~~~~i~~~~~~ 362 (421)
T PRK06777 295 -------GTY----AGNPLAVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKAKASCPAIVDI-RARGSMVAVEFNDPQ 362 (421)
T ss_pred -------CCC----CcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-cCceEEEEEEEecCc
Confidence 011 1233333344333311111356677778888888888653 333322 334445554443321
Q ss_pred CCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 413 SGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
. .....++...+.+.+.++|+++.....+ ..++|++. ....++++|+++++.|++.+
T Consensus 363 ~-------~~~~~~~~~~l~~~~~~~Gv~i~~~~~~--g~~lr~~p-pl~i~~~~i~~~~~~l~~~l 419 (421)
T PRK06777 363 T-------GKPSPEFTRQYQRQALEEGLLLLSCGVH--GNVIRFLY-PLTIPDAQFSKALNILTRLL 419 (421)
T ss_pred c-------CCccHHHHHHHHHHHHhCCeEEeecCCC--CCEEEEeC-CCCCCHHHHHHHHHHHHHHH
Confidence 0 0011345667777788889754332222 25799986 34678899999999998875
No 334
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.46 E-value=2.8e-10 Score=116.12 Aligned_cols=326 Identities=13% Similarity=0.088 Sum_probs=180.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHc
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIA 192 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 192 (486)
....++.+.|+++++-.-. ..+|+++||+|+..|+.+||.....+ +..+ +..+|......|-...-+....
T Consensus 97 ~~~~~lAe~L~~~~p~~~~-------~v~f~~sGseAve~AlKlA~~~~~~r-g~~~-r~~Ii~~~~~yHG~t~gals~~ 167 (453)
T PRK06943 97 EPAIELAERLAALTGGTLG-------HAFFASDGASAVEIALKMSFHAWRNR-GRGD-KREFVCLANGYHGETIGALGVT 167 (453)
T ss_pred HHHHHHHHHHHHhCCCCCC-------EEEEeCCCHHHHHHHHHHHHHHHHHh-CCCC-CCEEEEECCCcCCCcHHhhccc
Confidence 4445566778887653222 57999999999999999998754221 1111 2234444545554333333333
Q ss_pred CCC---------CCCeEEEecCCCCC--c--------ccCHHHHHHHHHHHHHCCCccEEEEeec-CCccccccCC----
Q 038818 193 GID---------PKNFRAIKTTKSSS--F--------TLTPESLQAAIDLDIQAGLIPLFLCATV-GTTAITTVDP---- 248 (486)
Q Consensus 193 G~g---------~~~v~~v~~d~~~~--~--------~~d~~~L~~~l~~~~~~g~~p~~vv~~~-gtt~~G~idp---- 248 (486)
|-. ...+..+|...... . .-++++|++.++. .+..+..|++.- .....|.+-|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAviiEPvvqg~gG~~~~~~~y 244 (453)
T PRK06943 168 DVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAE---RAGKIAALIVEPLVQCAAGMAMHDPSY 244 (453)
T ss_pred CChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEeccccccCCcccCCHHH
Confidence 210 01233444321000 0 0134677777753 223455677765 2555676543
Q ss_pred chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcCCccc
Q 038818 249 LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALSTNPEF 327 (486)
Q Consensus 249 l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~~~~y 327 (486)
++++.++|++||+.+++|+.+.|+.....-+....-++ ..|.+++ -|.++..+ +.|.++.+++- .+.+.....
T Consensus 245 l~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv-~PDivt~--gKgl~gG~~Pi~av~~~~ei--~~~~~~~~~- 318 (453)
T PRK06943 245 LRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGV-WPDFLCL--SKGISGGYLPLSLVLSRDAI--FAAFYDDDV- 318 (453)
T ss_pred HHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCC-CCCeEee--ehhhccCcccceEEEEcHHH--HHhhcccCc-
Confidence 89999999999999999999877532221111111234 5888887 68888764 78888887652 222321100
Q ss_pred ccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC---CCeEEecCCCeeEE
Q 038818 328 LRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGD---NRFEIVAPRNFAVV 404 (486)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~~~~~~~~~~v 404 (486)
.. .+....+....++++.++++.+..-.-.+..++..++.++|.+.|+++ +.+.-+. -...++
T Consensus 319 --------~~-----~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vr-G~Gl~~ 384 (453)
T PRK06943 319 --------TR-----GFLHSHSYTGNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLAAHPQVRHLR-QRGTIF 384 (453)
T ss_pred --------cC-----CccCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCEEeEe-ccccEE
Confidence 00 000011112344555455444321111235566777777777777653 3332111 112234
Q ss_pred EEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 405 CFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 405 ~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
.+.+..+. .. ......++.+.+.++|.++ .+. + ..+|++. ....|++|||+++++|++.++++.+
T Consensus 385 gvel~~~~--------~~-~~~~~~~i~~~~~~~Gll~-~~~---g-~~l~~~P-pl~it~~eid~~~~~l~~al~~~~~ 449 (453)
T PRK06943 385 AFDVALDG--------DA-ARTFSRRFFEAALERELLL-RPI---G-TTVYLMP-PYVLDDDEIAWLAERTRATLDATLA 449 (453)
T ss_pred EEEEccCC--------Cc-chHHHHHHHHHHHHCCcEE-Eec---C-CEEEEeC-CCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 44443211 00 0234567888888899754 322 2 3589886 3567889999999999999988765
Q ss_pred c
Q 038818 485 T 485 (486)
Q Consensus 485 ~ 485 (486)
+
T Consensus 450 ~ 450 (453)
T PRK06943 450 E 450 (453)
T ss_pred h
Confidence 4
No 335
>PRK07678 aminotransferase; Validated
Probab=99.46 E-value=5.5e-10 Score=114.16 Aligned_cols=328 Identities=11% Similarity=0.082 Sum_probs=178.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
++.+.++.+.|+++++... ..+|+++||+|+..|+.+||..... .|..+ +..+|......|-...-+...
T Consensus 88 ~~~~~~lae~l~~~~~~~~--------~v~f~~sGseA~e~AlklAr~~t~~-~g~~~-r~~ii~~~~~yHG~t~~als~ 157 (451)
T PRK07678 88 HEPAIKLAEKLNEWLGGEY--------VIFFSNSGSEANETAFKIARQYHAQ-KGEPH-RYKFISRYRAYHGNSMGALAA 157 (451)
T ss_pred CHHHHHHHHHHHHhCCCCC--------EEEEeCCcHHHHHHHHHHHHHHHHh-cCCCC-CcEEEEECCCcCCccHHHhhc
Confidence 3445566777888775432 5789999999999999999976422 12111 223444444455443333333
Q ss_pred cCCC---------CCCeEEEecCCCCCccc---------CH---HHHHHHHHHHHHCCCccEEEEeecCCccccccCC--
Q 038818 192 AGID---------PKNFRAIKTTKSSSFTL---------TP---ESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP-- 248 (486)
Q Consensus 192 ~G~g---------~~~v~~v~~d~~~~~~~---------d~---~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp-- 248 (486)
.|.. ...+..+|... .++. |. +.+++.|+.. .+..+..|++.-.....|.+-|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPiqg~gG~~~~~~ 233 (451)
T PRK07678 158 TGQAQRKYKYEPLAPGFLHVPPPD--CYRMPGIESEDIYDLECVKEIDRVMTWE--LSETIAAVIMEPIITGGGVLMPPQ 233 (451)
T ss_pred CCCcccccccCCCCCCCEEeCCCc--cccccccCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCH
Confidence 3210 11334444321 1111 12 2355556421 2234667777766666677755
Q ss_pred --chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCc
Q 038818 249 --LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNP 325 (486)
Q Consensus 249 --l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~ 325 (486)
++++.++|++||+.|++|+++.|+.....-+.....++ ..|.+++ -|.++.. +++|.++++++- . +.+....
T Consensus 234 ~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv-~PDivt~--gK~lggG~~Pi~av~~~~~i-~-~~~~~~~ 308 (451)
T PRK07678 234 DYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGV-KPDIITM--AKGITSAYLPLSATAVKKEI-Y-EAFKGKG 308 (451)
T ss_pred HHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCC-CCCEEEe--ecccccCCcceeEEEEcHHH-H-HHHhccC
Confidence 89999999999999999999966532211111111234 5888877 6888866 478888887652 2 2332111
Q ss_pred ccccCccCCCCCccCCCCccccCCCCCCchHHHHH---HHHhchHHHHHHHHHHHHHHHHHHHHHhC----CCCeEEecC
Q 038818 326 EFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLV---LRSFGVANLRNFLRSHVRMAQLFQELVGG----DNRFEIVAP 398 (486)
Q Consensus 326 ~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~---l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~ 398 (486)
.+- .+....+-...++.+.++ +..+-.+ ++.++..++.++|.+.|++ ++.+.-+ .
T Consensus 309 ~~~--------------~~~h~~T~~gnp~~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~~~~~~~~v~~v-r 370 (451)
T PRK07678 309 EYE--------------HFRHVNTFGGNPAACALALKNLEIMENE---NLIERSAQLGELLLEQLKEELGEHPLVGDI-R 370 (451)
T ss_pred ccc--------------ccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEE-E
Confidence 000 000011112233444444 4434333 3456666677777766643 3321111 1
Q ss_pred CCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEee--eeECCEeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 399 RNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSH--GMVAGIYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 399 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~--~~~~~~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
-...++.+.+..+... ..........++.+.+.++|++.... ++..+...+|++. ....|++|||+++++++
T Consensus 371 g~Gl~~~i~~~~~~~~-----~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~P-pl~it~~eid~~~~~l~ 444 (451)
T PRK07678 371 GKGLLVGIELVNDKET-----KEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSP-PLVISSEEIAFIVGTLK 444 (451)
T ss_pred eeceEEEEEEecCCcc-----cCcCchHHHHHHHHHHHHCCcEEeecCccccCCCCEEEEEC-CCcCCHHHHHHHHHHHH
Confidence 1233445544322100 00001244567888888999854221 1112346799987 34668889999999999
Q ss_pred HHHHHH
Q 038818 477 EKLDGI 482 (486)
Q Consensus 477 ~~~~~l 482 (486)
++++++
T Consensus 445 ~~l~~~ 450 (451)
T PRK07678 445 TALERI 450 (451)
T ss_pred HHHHhc
Confidence 988764
No 336
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.46 E-value=7.5e-10 Score=112.29 Aligned_cols=316 Identities=12% Similarity=0.039 Sum_probs=174.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.+...++.+.+++++.-+.. ...+|+++|||||..|+..||... | +..+|......|-...-+...
T Consensus 82 ~~~~~~la~~l~~~~p~~~~------~~v~f~~SGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~~~~ 147 (425)
T PRK07495 82 YENYVRLAERLNALVPGDFA------KKTIFVTTGAEAVENAVKIARAAT-------G-RSAVIAFGGGFHGRTFMGMSL 147 (425)
T ss_pred CHHHHHHHHHHHHhCCCCCC------CEEEECCchHHHHHHHHHHHHHhh-------C-CCeEEEECCCcCCccHHHhhh
Confidence 34445566778887642210 157999999999999999998752 1 223444454555443222222
Q ss_pred cCC--------C--CCCeEEEecCCCCCcccC----HHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHH
Q 038818 192 AGI--------D--PKNFRAIKTTKSSSFTLT----PESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLC 253 (486)
Q Consensus 192 ~G~--------g--~~~v~~v~~d~~~~~~~d----~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~ 253 (486)
.|. + ...+..+|.+.+.+ .++ ++++++.++... .+..+.+|++.-.....|.+-| +++|.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~ 225 (425)
T PRK07495 148 TGKVVPYKVGFGAMMPDVYHVPFPVELH-GVSVEQSLAALDKLFKADV-DPQRVAAIIIEPVQGEGGFYPAPAAFMKALR 225 (425)
T ss_pred cCCCcccccCCCCCCCCeEEecCCcccc-cccHHHHHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHH
Confidence 221 1 11345566542111 233 344465554211 1234566777766556675533 89999
Q ss_pred HHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccC
Q 038818 254 DIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKAS 333 (486)
Q Consensus 254 ~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~ 333 (486)
++|++||+++++|+++.|+.....-+.....++ ..|.+++ .|.++..+++|.++.+++ . .+.+.. ...
T Consensus 226 ~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv-~pDi~tl--sK~l~~G~pigav~~~~~-i-~~~~~~--~~~----- 293 (425)
T PRK07495 226 ELCDQHGILLIADEVQTGFARTGKLFAMEHHEV-AADLTTM--AKGLAGGFPLAAVTGRAE-I-MDAPGP--GGL----- 293 (425)
T ss_pred HHHHHcCCEEEEechhhcCCcCCCceeecccCC-CCCEEee--hhhhcCCccceEEEEcHH-H-HhccCC--CCc-----
Confidence 999999999999999976422111111101122 3565554 788887677888887653 2 222211 000
Q ss_pred CCCCccCCCCccccCCCCCCchHHH---HHHHHhchHHHHHHHHHHHHHHHHHHHHHhC----CCCe-EEecCCCeeEEE
Q 038818 334 DSKQVVDYKDWQITLSRRFRALKLW---LVLRSFGVANLRNFLRSHVRMAQLFQELVGG----DNRF-EIVAPRNFAVVC 405 (486)
Q Consensus 334 ~~~~~~~~~~~~~~~sr~~~~l~~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~-~~~~~~~~~~v~ 405 (486)
..+-....+.+. ++++.+..+ +..++..++.++|++.|++ .|.+ ++.+. ..++.
T Consensus 294 -------------~~T~~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~--Gl~~~ 355 (425)
T PRK07495 294 -------------GGTYGGNPLGIAAAHAVLDVIEEE---DLCERANQLGNRLKQRLASLRETVPEIADIRGP--GFMNA 355 (425)
T ss_pred -------------CCCCCCCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecC--ceEEE
Confidence 001112333333 444444332 3455666667777666654 3322 22212 33445
Q ss_pred EEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 406 FRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 406 f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
+.+.+.... ........++.+.+.++|.+. ...... ...+|+.. ....++++||++++.|+++++++.
T Consensus 356 iel~~~~~~-------~~~~~~~~~~~~~~~~~Gvl~-~~~g~~-~~~~r~~P-pl~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 356 VEFNDADSG-------LPSAEFANRVRLKALEKGLIL-LTCGVH-GNVIRFLA-PITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred EEEecCCCC-------CccHHHHHHHHHHHHHCCeEE-eecCCC-CCEEEEeC-CCccCHHHHHHHHHHHHHHHHHHh
Confidence 555432110 001234567888888899754 222111 36799987 467899999999999999998764
No 337
>PRK07482 hypothetical protein; Provisional
Probab=99.46 E-value=4.1e-10 Score=115.29 Aligned_cols=334 Identities=10% Similarity=0.013 Sum_probs=178.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
++.+.++.+.|++++.-+-+ ..+|+++||||+..|+.+||.....+ +..+ +..+|......|-.-.-+...
T Consensus 93 ~~~~~~lAe~L~~~~p~~~~-------~v~f~~sGSEAve~AlKlAr~~~~~~-g~~~-r~~Ii~~~~~YHG~t~ga~s~ 163 (461)
T PRK07482 93 TEASITLSKRIIDRAPAGMS-------KVYYGLSGSDANETQIKLVWYYNNVL-GRPE-KKKIISRWRGYHGSGVVTGSL 163 (461)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCchHHHHHHHHHHHHHHHHhc-CCCC-CceEEEecCccCCccHhhhhc
Confidence 45566677888887632112 57899999999999999998753211 2111 222333344455332222222
Q ss_pred cC---------CCCCCeEEEecCCCCCc-----------ccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---
Q 038818 192 AG---------IDPKNFRAIKTTKSSSF-----------TLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP--- 248 (486)
Q Consensus 192 ~G---------~g~~~v~~v~~d~~~~~-----------~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp--- 248 (486)
.| .....+..+|.....+. .-++++|++.++.. ....+..|++.-.....|.+-|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPvqg~gG~~~~~~~ 241 (461)
T PRK07482 164 TGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAE--GPDTIAAFIAEPVLGTGGIVPPPAG 241 (461)
T ss_pred cCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCcEEEEEECCccCCCCCcCCCHH
Confidence 21 11123344433210000 01457777777532 1233566777766665676643
Q ss_pred -chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcCCcc
Q 038818 249 -LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALSTNPE 326 (486)
Q Consensus 249 -l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~~~~ 326 (486)
+++|.++|++||+.|++|+.+.|+.....-+.....++ ..|.+++ -|.++..+ +.|.++.+++ . .+.+....+
T Consensus 242 yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~~-i-~~~~~~~~~ 316 (461)
T PRK07482 242 YWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGI-EPDLITV--AKGLTSAYAPLSGSIVGEK-V-WDVLEQGSD 316 (461)
T ss_pred HHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCC-CCCEEEE--ccccccCccccceeeecHH-H-HHHHhcccc
Confidence 88999999999999999999877643222222212244 5888886 68888765 6788887754 2 222321100
Q ss_pred cccCccCCCCCccCCCCccccCCCCCCchHHHHH---HHHhchHHHHHHHHHHHHHHHHHHHHHhC----CCCeEEecCC
Q 038818 327 FLRNKASDSKQVVDYKDWQITLSRRFRALKLWLV---LRSFGVANLRNFLRSHVRMAQLFQELVGG----DNRFEIVAPR 399 (486)
Q Consensus 327 y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~---l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~ 399 (486)
.. + .+....+-...++++.++ ++.+-.+ +..++..++.++|.+.|++ +|.+.-+ .-
T Consensus 317 ~~--------~-----~~~h~~T~~gnpl~~Aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~v-rG 379 (461)
T PRK07482 317 EH--------G-----AIGHGWTYSGHPICAAAALANLDILERE---NLVGNAAEVGAYFRARLRAAFGDHPLVGEV-RG 379 (461)
T ss_pred cC--------C-----ccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEE-ee
Confidence 00 0 000011112334444444 4444333 3455566677777777653 4322111 11
Q ss_pred CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 400 NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 400 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
...++.+.+...... .++ ........+++...+.++|.+. .... +...+|+.. ....|++|||+++++|++.+
T Consensus 380 ~Glm~giel~~~~~~-~~~--~~~~~~~~~~i~~~~~~~Gvl~-~~~~--~~~~i~~~P-pl~it~~ei~~~~~~l~~~l 452 (461)
T PRK07482 380 VGMLAAVEFVADRDD-RTP--FDPALKIGPQVSAAALERGVIA-RAMP--HGDILGFAP-PLVLTRAEADEIVAIAKDAV 452 (461)
T ss_pred ceeEEEEEeccCCCc-CCC--CChhhHHHHHHHHHHHHCCcEE-ecCC--CCCEEEEeC-CCCCCHHHHHHHHHHHHHHH
Confidence 223444444321100 000 0000124567888888999753 2211 235688876 46778999999999999998
Q ss_pred HHHhhc
Q 038818 480 DGILAT 485 (486)
Q Consensus 480 ~~l~~~ 485 (486)
+++.++
T Consensus 453 ~~~~~~ 458 (461)
T PRK07482 453 DEVLGR 458 (461)
T ss_pred HHHHHH
Confidence 876543
No 338
>PRK07480 putative aminotransferase; Validated
Probab=99.46 E-value=3.2e-10 Score=115.84 Aligned_cols=330 Identities=13% Similarity=0.052 Sum_probs=172.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
...+.++.+.|+++++-..+ ..+|+++||+|+..|+.+||...... |..+ +..+|......|-...-+...
T Consensus 93 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGseA~e~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~tl~a~s~ 163 (456)
T PRK07480 93 HPPAIELAAKLAEVAPPGFN-------HVFFTNSGSEANDTVLRMVRHYWALK-GKPQ-KKVIISRKNGYHGSTVAGASL 163 (456)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCcchhhhhc
Confidence 34555667778887642222 57899999999999999998753211 1111 222333444455433222222
Q ss_pred cCC-------C--CCCeEEEecCCC--CCcccC--------HHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----
Q 038818 192 AGI-------D--PKNFRAIKTTKS--SSFTLT--------PESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---- 248 (486)
Q Consensus 192 ~G~-------g--~~~v~~v~~d~~--~~~~~d--------~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---- 248 (486)
.|. + ...+..+|.... .....+ +++|++.+.+. .+..+..|++.......|.+-|
T Consensus 164 ~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~vAAvi~EPiqg~gG~~~~~~~y 241 (456)
T PRK07480 164 GGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILEL--GADNVAAFIGEPIQGAGGVIIPPATY 241 (456)
T ss_pred cCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHHH
Confidence 221 0 112333332100 000011 25555555321 1234556777766666777766
Q ss_pred chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcCCccc
Q 038818 249 LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALSTNPEF 327 (486)
Q Consensus 249 l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~~~~y 327 (486)
+++|.++|++||+.|++|+++.|+.-...-+.....++ ..|.+++ -|.++..+ +.|.++.+++ .. +.+...+..
T Consensus 242 l~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~~-i~-~~~~~~~~~ 316 (456)
T PRK07480 242 WPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGI-KPDLMTI--AKGLTSGYIPMGAVGVGDR-VA-EVLIEEGGE 316 (456)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCC-CCCeeee--ehhhccCCccceEEEEcHH-HH-HHHhcCCCC
Confidence 99999999999999999999976532211111111233 4777766 68887654 6788887654 22 233111110
Q ss_pred ccCccCCCCCccCCCCccccCCCCCCchHHHH---HHHHhchHHHHHHHHHH-HHHHHHHHHHHhCCCCeEEecCC--Ce
Q 038818 328 LRNKASDSKQVVDYKDWQITLSRRFRALKLWL---VLRSFGVANLRNFLRSH-VRMAQLFQELVGGDNRFEIVAPR--NF 401 (486)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~---~l~~~g~~g~~~~~~~~-~~~a~~l~~~L~~~~~~~~~~~~--~~ 401 (486)
... ..+-...++.+.+ +|..+-.+ +..++. .++.++|.+.|+++....++... ..
T Consensus 317 ~~~----------------~~T~~gnpl~~Aaa~a~L~~l~~~---~l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~G 377 (456)
T PRK07480 317 FNH----------------GFTYSGHPVAAAVALANLRILRDE---GIVERVRDDTGPYLQKRLRELADHPLVGEVRGVG 377 (456)
T ss_pred ccc----------------CCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhhcCCCeeeEEeec
Confidence 000 0111123344444 44444333 344555 35666666666553222111111 12
Q ss_pred eEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 402 AVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 402 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
.++.+.+..+... .. ...........+.+.+.++|.+. .+. + ..+|++. ....|++|||++++.|++++++
T Consensus 378 lm~gie~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~Gll~-~~~---~-~~l~~~P-pl~it~~eid~~~~~l~~al~~ 448 (456)
T PRK07480 378 LVGAIELVKDKAT-RE--RFEAGGGVGTICRDHCFANGLIM-RAV---G-DRMIISP-PLVITHAEIDELVEKARKALDA 448 (456)
T ss_pred ceEEEEEeccccc-cc--cCcchhhHHHHHHHHHHHCCcEE-eec---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHH
Confidence 3444444322100 00 00011223456777888899754 321 2 4688876 3456889999999999999988
Q ss_pred Hhhc
Q 038818 482 ILAT 485 (486)
Q Consensus 482 l~~~ 485 (486)
+.+|
T Consensus 449 ~~~~ 452 (456)
T PRK07480 449 TAAE 452 (456)
T ss_pred HHHH
Confidence 7554
No 339
>PLN00144 acetylornithine transaminase
Probab=99.46 E-value=1.8e-10 Score=115.38 Aligned_cols=301 Identities=13% Similarity=0.028 Sum_probs=166.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCC-----CCeEEEecCCCchHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENI-----SRLVVYGSDQTHSALQ 186 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~-----~~~~v~~s~~~H~s~~ 186 (486)
+..+.++.+.|+++.+. + ..+++++||||+..|+..||....++....+. +..+|......|-...
T Consensus 56 ~~~~~~la~~l~~~~~~--~-------~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~ 126 (382)
T PLN00144 56 TIPQVELAKRLVASSFA--D-------RVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTL 126 (382)
T ss_pred CHHHHHHHHHHHhcCCC--C-------eEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccH
Confidence 34445566777776542 2 57999999999999999998764221100000 1234445555564433
Q ss_pred HHHHHcCCC---------CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc--CC--chHHH
Q 038818 187 KAAQIAGID---------PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV--DP--LGPLC 253 (486)
Q Consensus 187 ~a~~~~G~g---------~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i--dp--l~~I~ 253 (486)
-+....+-. ...+..+|. -|+++|++.++. ..+.+|+++-..++.|.+ ++ +++|.
T Consensus 127 ~~~s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~-----~~~aavi~eP~q~~gg~~~~~~~~~~~l~ 194 (382)
T PLN00144 127 GALALTSKEQYRTPFEPLMPGVTFVEY-------GNLEAARKLIQK-----GKTAAVFVEPVQGEGGIYPATKEFLQGLR 194 (382)
T ss_pred HHHhcCCCccccccCCCCCCCeEEeCC-------CCHHHHHHhcCC-----CCeEEEEEccccCCCCCccCCHHHHHHHH
Confidence 343333321 012233332 178999988742 235566666556664443 34 89999
Q ss_pred HHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccC
Q 038818 254 DIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKAS 333 (486)
Q Consensus 254 ~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~ 333 (486)
++|++||+++++|.++.++......+.....++ ..|. .+..|.++..+.+|+++.+++ .. +.+.. ...
T Consensus 195 ~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~-~PDi--~t~sK~l~~G~pig~v~~~~~-~~-~~~~~---~~~---- 262 (382)
T PLN00144 195 ALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGV-EPDI--MTLAKPLAGGLPIGAVLVTEK-VA-SAINP---GDH---- 262 (382)
T ss_pred HHHHHcCCEEEEechhhCCCccchHhhhhhcCC-CCCE--EEecccccCCcceEEEEEcHH-HH-hccCC---CCC----
Confidence 999999999999999977533221111112233 3564 445799987788999888644 22 22210 000
Q ss_pred CCCCccCCCCccccCCCCCCchHH---HHHHHHhchHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEecCCCeeEEEE
Q 038818 334 DSKQVVDYKDWQITLSRRFRALKL---WLVLRSFGVANLRNFLRSHVRMAQLFQE----LVGGDNRFEIVAPRNFAVVCF 406 (486)
Q Consensus 334 ~~~~~~~~~~~~~~~sr~~~~l~~---~~~l~~~g~~g~~~~~~~~~~~a~~l~~----~L~~~~~~~~~~~~~~~~v~f 406 (486)
..+.....+.+ .+++..+-.+.+ .++..++.+++.+ .+.+.|.+.-+.. ...++.+
T Consensus 263 -------------~~T~~~~pl~~aaa~a~l~~i~~~~~---~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg-~G~~~~l 325 (382)
T PLN00144 263 -------------GSTFAGGPLVCNAALAVLDKISKPGF---LASVAKKGEYLRELLRRKLGGNPHVKEVRG-VGLLVGI 325 (382)
T ss_pred -------------CCCCCCCHHHHHHHHHHHHHHhhchH---HHHHHHHHHHHHHHHHHHHhhCCCceeeec-CceEEEE
Confidence 00111233333 334455533333 3344444444444 4444543321212 3334444
Q ss_pred EeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 407 RVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
.+... ...+.+.+.++|+.+. +. ....++|+++. ...++++|+++++.|.+++.++
T Consensus 326 ~l~~~----------------~~~~~~~~~~~Gv~i~-~~--~~~~~lrl~p~-~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 326 QLDVP----------------AGPLVDACRDSGLLVL-TA--GKGDVVRLVPP-LVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred EecCc----------------cHHHHHHHHHCCeEEe-ec--CCCCEEEEeCC-CccCHHHHHHHHHHHHHHHHhc
Confidence 44211 2356777788898543 32 11368999983 4467889999999999988654
No 340
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.46 E-value=7.7e-10 Score=112.87 Aligned_cols=322 Identities=11% Similarity=0.035 Sum_probs=175.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.+.+.++.+.|++++.-... ...+|+++||+||..|+..||... | ++.+|......|-...-+...
T Consensus 84 ~~~~~~lae~L~~~~p~~~~------~~v~f~~SGseA~e~AiklAr~~t-------g-r~~ii~~~~~YHG~t~~als~ 149 (445)
T PRK08593 84 HEPLVRLAKKLCELAPGDFE------KRVTFGLSGSDANDGIIKFARAYT-------G-RPYIISFTNAYHGSTYGSLSM 149 (445)
T ss_pred CHHHHHHHHHHHHhCCCCCC------CEEEECCchHHHHHHHHHHHHHhh-------C-CCeEEEECCCcCCCcHHHHhh
Confidence 34555666778887642210 157899999999999999998752 1 233444455566554444444
Q ss_pred cCCC----------CCCeEEEecCCCCC---cccCH-------HHHHHHHHHHHHCCCccEEEEeecCCccccccCC---
Q 038818 192 AGID----------PKNFRAIKTTKSSS---FTLTP-------ESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP--- 248 (486)
Q Consensus 192 ~G~g----------~~~v~~v~~d~~~~---~~~d~-------~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp--- 248 (486)
.+.. ...++.+|...... ...+. +++++.++... ....+.+|++.......|.+-|
T Consensus 150 s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavI~EPv~g~gG~~~~~~~ 228 (445)
T PRK08593 150 SGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYL-PADEVACIVIETIQGDGGLLEPVPG 228 (445)
T ss_pred cCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhc-CCCceEEEEEccccCCCCCcCCCHH
Confidence 3311 11344555431100 01122 33444333211 1123567788777777788766
Q ss_pred -chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCccc
Q 038818 249 -LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEF 327 (486)
Q Consensus 249 -l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y 327 (486)
+++|.++|++||+++++|+++.|+.....-+.....++ ..|.+++ .|.++..++.|.++.+++ .. +.+.. ..+
T Consensus 229 yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv-~pDi~t~--gK~l~~G~p~gav~~~~~-i~-~~~~~-~~~ 302 (445)
T PRK08593 229 YFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNI-TPDLMSF--GKSLAGGMPMSAIVGRKE-IM-ESLEA-PAH 302 (445)
T ss_pred HHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCC-CCCEeee--cccccCCcccEEEEEcHH-HH-hhhcc-CCC
Confidence 99999999999999999999866422111010011133 4676654 688876567888887643 22 22321 111
Q ss_pred ccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEecCC--CeeEE
Q 038818 328 LRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDN-RFEIVAPR--NFAVV 404 (486)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~--~~~~v 404 (486)
.. |. .+.+....+...++..+-.+ ++.++..++.++|++.|+++. ...++... ...++
T Consensus 303 ~~---------------T~-~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~ 363 (445)
T PRK08593 303 LF---------------TT-GANPVSCAAALATIDMIEDE---SLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSI 363 (445)
T ss_pred CC---------------CC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEE
Confidence 10 11 11111122233344444222 456677777777777776431 11111111 12233
Q ss_pred EEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 405 CFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 405 ~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
.+.+...... ..........+...+.++|+++ .+. +...+|++. ....|++|||+++++++++++++.+
T Consensus 364 gi~l~~~~~~------~~~~~~~~~~~~~~~~~~Gv~~-~~~---~~~~lr~~p-~l~~t~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 364 GIDIVSDKKL------KTRDNEAALKICNYCFEHGVVI-IAV---AGNVLRFQP-PLVITYEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred EEEEecCCCc------CCCcHHHHHHHHHHHHHCCeEE-ecc---CCCEEEEEC-CCccCHHHHHHHHHHHHHHHHHHhc
Confidence 3433321100 0001344567888888899753 221 235799988 4677888999999999999887654
No 341
>PRK07036 hypothetical protein; Provisional
Probab=99.45 E-value=3.7e-10 Score=115.73 Aligned_cols=330 Identities=10% Similarity=0.089 Sum_probs=178.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
++.+.++.+.|.+++.-+- ...+|+++||+|+..|+..||..... .+..+ +..+|......|-...-+...
T Consensus 94 ~~~~~~lae~L~~~~p~~~-------~~v~f~~sGseAve~AlklAr~~~~~-~g~t~-r~~Ii~~~~~YHG~t~~a~s~ 164 (466)
T PRK07036 94 NAPAAELAAKLAELAPGDL-------NHVFLTTGGSTAVDSALRFVHYYFNV-RGRPA-KKHIITRGDAYHGSTYLTASL 164 (466)
T ss_pred CHHHHHHHHHHHHhCCCCc-------CEEEEeCCchHHHHHHHHHHHHHHHh-cCCCC-ccEEEEEcCccCCccHhhhcc
Confidence 4455667777887753221 25799999999999999999865321 11111 223444444455443333333
Q ss_pred cCCC---------CCCeEEEecCCC--CCcccC--------HHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----
Q 038818 192 AGID---------PKNFRAIKTTKS--SSFTLT--------PESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---- 248 (486)
Q Consensus 192 ~G~g---------~~~v~~v~~d~~--~~~~~d--------~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---- 248 (486)
.|.. ...+..+|.... ....+. .+.+++.+.. ..+..+.+|++.......|.+-|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~iAavi~EPv~g~gG~~~p~~~y 242 (466)
T PRK07036 165 TGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILS--LGADNIAAFIAEPILGSGGVIVPPPGY 242 (466)
T ss_pred cCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHH--cCCCceEEEEEeCCcCCCCCccCCHHH
Confidence 3321 012444443210 000111 2345555542 12344667888877777788776
Q ss_pred chHHHHHHHHhCceEEeeccccchhccCccchhh-hcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcCC--
Q 038818 249 LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHF-IDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALSTN-- 324 (486)
Q Consensus 249 l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~-~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~~-- 324 (486)
+++|.++|++||+.+++|+++.|+.....-+... .-++ ..|.+++ -|.++..+ ++|.++.+++ .. +.+...
T Consensus 243 l~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv-~PDivt~--gK~l~gG~~Pi~av~~~~~-i~-~~~~~~~~ 317 (466)
T PRK07036 243 HARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGI-QPDIITF--AKGLTSGYQPLGAVIISER-LL-DVISGPNA 317 (466)
T ss_pred HHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCC-CCCEEEE--ccccccCccccEEEEEcHH-HH-HHHhcccC
Confidence 9999999999999999999987653221111100 1133 4687776 68887664 6888888754 22 233211
Q ss_pred cc--cccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC--CC
Q 038818 325 PE--FLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP--RN 400 (486)
Q Consensus 325 ~~--y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~ 400 (486)
+. |.. ..+-...++++.+++..+..-.-.++.++..++.++|++.|+++....++.. -.
T Consensus 318 ~~~~~~~-----------------~~T~~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~ 380 (466)
T PRK07036 318 KGNVFTH-----------------GFTYSGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASLRELPLVGDVRGD 380 (466)
T ss_pred cCccccc-----------------CCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 00 110 0111234444444444431111124667777888888888865422222111 11
Q ss_pred eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 401 FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 401 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
..++.+.+..+... .+. ..........+.+.+.++|.+. .+. + ..+|++. ....|++|||++++++.++++
T Consensus 381 Gl~~~ve~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~Gvl~-~~~---~-~~~~l~P-pl~it~~~id~~~~~l~~al~ 451 (466)
T PRK07036 381 HLMACVECVADKGS-KAL--LPEDIAIGQRIDRHCQERGLLV-RPL---E-HLCVLSP-PLIITRAQIDEIVAILRAAIE 451 (466)
T ss_pred ceEEEEEEccCccc-cCC--CCchhHHHHHHHHHHHHCCcEE-eec---C-CEEEEeC-CCcCCHHHHHHHHHHHHHHHH
Confidence 23444544322100 000 0011234567788888899753 321 2 3577765 235688899999999998887
Q ss_pred HHh
Q 038818 481 GIL 483 (486)
Q Consensus 481 ~l~ 483 (486)
++.
T Consensus 452 ~~~ 454 (466)
T PRK07036 452 ETA 454 (466)
T ss_pred HHH
Confidence 654
No 342
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.45 E-value=1.4e-10 Score=113.87 Aligned_cols=331 Identities=14% Similarity=0.076 Sum_probs=182.1
Q ss_pred CccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCC-CCeEEEecC
Q 038818 101 VGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENI-SRLVVYGSD 179 (486)
Q Consensus 101 ~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~-~~~~v~~s~ 179 (486)
....|..+|...+||+. +++++|++. +++|..|+.++..+....... .|.+.. ....-+++.
T Consensus 66 GDD~Y~gdpSv~~Lee~----vael~G~E~---------alpthqGRgaE~Il~~~~~~~----~g~e~g~~~~~~~v~h 128 (467)
T TIGR02617 66 GDEAYSGSRSYYALAES----VKNIFGYQY---------TIPTHQGRGAEQIYIPVLIKK----REQEKGLDRSKMVAFS 128 (467)
T ss_pred CCcccccCchHHHHHHH----HHHHhCCce---------EEECCCCchHHHHHHHhhccc----ccccccccccccccce
Confidence 44578889998888865 577888763 588988999988776654431 010000 000002344
Q ss_pred CCchHH-HHHHHHcCCCCCCeEEEecC--------CCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcc-cccc---
Q 038818 180 QTHSAL-QKAAQIAGIDPKNFRAIKTT--------KSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTA-ITTV--- 246 (486)
Q Consensus 180 ~~H~s~-~~a~~~~G~g~~~v~~v~~d--------~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~-~G~i--- 246 (486)
..|+-- ...+.+.|+ .++.++.+ ..-+|.+|++.|+++|++.-. ..+++ +..+..+|. -|..
T Consensus 129 n~~fett~g~a~l~G~---~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~-~~i~~-v~~tlt~N~~GGqpvsl 203 (467)
T TIGR02617 129 NYFFDTTQGHSQINGC---TARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGP-NNVPY-IVATITCNSAGGQPVSL 203 (467)
T ss_pred EEEEecchHHHHHcCc---eeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCC-CCcee-eeeeEEEecCCCEEeCH
Confidence 455543 345667787 66665432 112479999999999986421 12232 333322233 3444
Q ss_pred CCchHHHHHHHHhCceEEeeccccch-hccCc---------cchhhhc-CCCCCCceeeccccccCCCCcceEEEeeCc-
Q 038818 247 DPLGPLCDIAKRYSIWVHVDAAYAGS-ACICP---------EFRHFID-GIEGADSFSLNAHKWFFTTLDCCCLWVKNP- 314 (486)
Q Consensus 247 dpl~~I~~i~~~~g~~lhvD~a~g~~-~~~~~---------~~~~~~~-~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~- 314 (486)
+.++++.++|++||+.+|+|||--.- +.+.. ..+.... -.+.+|++++++.|-+++|.| |++..+++
T Consensus 204 enlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvG-g~Lag~d~~ 282 (467)
T TIGR02617 204 ANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCFKDDS 282 (467)
T ss_pred HHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCccc-ceEEecchh
Confidence 66789999999999999999986442 22211 0111110 125899999999999999975 56667777
Q ss_pred --hHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 038818 315 --NALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNR 392 (486)
Q Consensus 315 --~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~ 392 (486)
+++.+.-.....|-. ...|+. -.+|-..+++ ..|... --.+.+++.....+||.+.|.+. |
T Consensus 283 ~~~l~~~~~~~~i~~EG--------f~tYGG---lagrd~ea~a--~Gl~e~---~~~~yl~~ri~qv~yl~~~L~~~-G 345 (467)
T TIGR02617 283 FFDVYTECRTLCVVQEG--------FPTYGG---LEGGAMERLA--VGLYDG---MNLDWLAYRINQVQYLVNGLEEI-G 345 (467)
T ss_pred HHHHHHHHHhhcccccC--------CcCcCc---hhHHHHHHHH--hhhhhc---ccHHHHHHHHHHHHHHHHHHHhC-C
Confidence 444443322222211 111110 0122122221 122221 22456677788889999999886 7
Q ss_pred eEEecCCCeeEEEE---EeecCCCCCCCCCCccchHHHHHHHHHHH-HhcCcEEEeeeeE-------------CCEeEEE
Q 038818 393 FEIVAPRNFAVVCF---RVLPSASGLGDGKANEGANELNRKLLESI-NASGQLYVSHGMV-------------AGIYFIR 455 (486)
Q Consensus 393 ~~~~~~~~~~~v~f---~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~-------------~~~~~lR 455 (486)
+.++. ....-|.+ ++.|.-. ..+ --.+.|.-.| .+.|+=.+.-+.+ ..-..+|
T Consensus 346 vpi~~-~Gghav~iDa~~~lphip-------~~~--fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~R 415 (467)
T TIGR02617 346 VVCQQ-AGGHAAFVDAGKLLPHIP-------ADQ--FPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLR 415 (467)
T ss_pred CcEEe-cCccEEEEehhhhCCCCC-------hhh--CcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceee
Confidence 87765 33332222 1212110 000 0122333333 3455421111111 1135799
Q ss_pred EEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 456 FAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 456 ~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
+++--..-|.+++|.+++.|..+.++
T Consensus 416 laipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 416 LTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred eccccccccHhHHHHHHHHHHHHHhh
Confidence 99844444677999999999988753
No 343
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.45 E-value=1.9e-10 Score=116.92 Aligned_cols=307 Identities=14% Similarity=0.067 Sum_probs=173.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
+..+.++.+.|.+++.. . ....|+++||+|+..|+..||... | +..+|......|-...-+...
T Consensus 92 ~~~~~~la~~l~~~~p~-~-------~~v~f~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~~~~ 155 (428)
T PRK12389 92 TELEIEFAKMLKEAIPS-L-------EKVRFVNSGTEAVMTTIRVARAYT-------G-RTKIIKFAGCYHGHSDLVLVA 155 (428)
T ss_pred CHHHHHHHHHHHHhCCC-C-------cEEEEeCCHHHHHHHHHHHHHHhh-------C-CCEEEEECCCcCCChHHHHHh
Confidence 34456667777777641 1 157899999999999999999862 1 233444454555443333333
Q ss_pred cCCCC----------------CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chH
Q 038818 192 AGIDP----------------KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGP 251 (486)
Q Consensus 192 ~G~g~----------------~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~ 251 (486)
.|.+. ..+..+|. -|++.|++.+++. +..+.+|++.......|.+.| +++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~---~~~vaavi~EPv~g~~G~~~p~~~yl~~ 225 (428)
T PRK12389 156 AGSGPSTLGTPDSAGVPKSIAQEVITVPF-------NDIEALKEALDKW---GDEVAAVLVEPIVGNFGIVEPKPGFLEA 225 (428)
T ss_pred cCCcccccCCCCCCCCCCcccCceEEcCC-------CCHHHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHH
Confidence 33100 11222221 2789999988643 233567888777777888888 999
Q ss_pred HHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCC-cccccC
Q 038818 252 LCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTN-PEFLRN 330 (486)
Q Consensus 252 I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~-~~y~~~ 330 (486)
|.++|++||+.+++|+++.|+ -....+....-++ ..|.+++ -|.++..++.|.++.+++ .. +.+... +.+..
T Consensus 226 l~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv-~PDivt~--gK~lggG~Pi~av~~~~~-i~-~~~~~~~~~~~~- 298 (428)
T PRK12389 226 VNELAHEAGALVIYDEVITAF-RFMYGGAQDLLGV-EPDLTAL--GKIIGGGLPIGAYGGRKD-IM-EQVAPLGPAYQA- 298 (428)
T ss_pred HHHHHHHcCCEEEEEcccccc-ccCcchhhHHhCC-CCCeeee--chhhcCCCceeEEeEHHH-HH-hhhccCCCcccc-
Confidence 999999999999999999876 2211111111233 5777655 788887677888877543 22 233210 10110
Q ss_pred ccCCCCCccCCCCccccCCCCCCchHHH---HHHHHhchHHHHHHHHHHHHHHHHHHHHHhC----CCC-eEEecCCCee
Q 038818 331 KASDSKQVVDYKDWQITLSRRFRALKLW---LVLRSFGVANLRNFLRSHVRMAQLFQELVGG----DNR-FEIVAPRNFA 402 (486)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~sr~~~~l~~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~-~~~~~~~~~~ 402 (486)
.+-...++.+. +++..+..+ +..++..++.++|++.|++ ++- ..+.... +
T Consensus 299 -----------------~T~~gnpl~~Aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~--g 356 (428)
T PRK12389 299 -----------------GTMAGNPASMAAGIACLEVLQQE---GVYEKLDRLGAMLEEGILEAAEKHGITITINRLK--G 356 (428)
T ss_pred -----------------cCCccCHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC--c
Confidence 11122334333 344444333 3566777788888887765 331 1222211 2
Q ss_pred EEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 403 VVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 403 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
++.+.+......... ............+.+.+.++|++. .+. +...+.. ....+++|||++++++++++++
T Consensus 357 ~~gi~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~Gv~~-~~~---~~~~~~~---~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 357 ALTVYFTDEKVTNYD-QAERSDGEAFGKFFKLMLNQGINL-APS---KYEAWFL---TTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred EEEEEEeCCCCCChh-hhcccCHHHHHHHHHHHHHCCcEe-ecC---CCCCeee---cCCCCHHHHHHHHHHHHHHHHh
Confidence 434433221100000 000001234567788888889743 332 1112223 3466888999999999998865
No 344
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.44 E-value=7.6e-11 Score=119.41 Aligned_cols=319 Identities=12% Similarity=0.035 Sum_probs=169.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCe-EEEecCCCchHH---HH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRL-VVYGSDQTHSAL---QK 187 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~---~~ 187 (486)
+..+.++.+.|.++++.... ...|+++||||+..|+..||... ++. +|......|-.. ..
T Consensus 92 ~~~~~~la~~L~~~~~~~~~-------~v~f~~SGsEA~e~AiklAr~~t---------gr~~ii~~~~~yHG~td~~~~ 155 (433)
T PRK00615 92 SEQEILFAEELFSYLGLEDH-------KIRFVSSGTEATMTAVRLARGIT---------GRSIIIKFLGCYHGHADTLLQ 155 (433)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCchHHHHHHHHHHHHHhh---------CCCEEEEEcCccCCCCcccCc
Confidence 34555677888888754322 57999999999999999999762 233 333343444322 11
Q ss_pred HHHHcCCCCCCe-EEE---ecCCC-CC-cccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCc----hHHHHHHH
Q 038818 188 AAQIAGIDPKNF-RAI---KTTKS-SS-FTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPL----GPLCDIAK 257 (486)
Q Consensus 188 a~~~~G~g~~~v-~~v---~~d~~-~~-~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl----~~I~~i~~ 257 (486)
+....+-..... ... +.... .. -.-|+++|++.+++. +..+.+|++.......|.+-|. ++|.++|+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~ 232 (433)
T PRK00615 156 GISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSL---GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCR 232 (433)
T ss_pred ccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhc---CCceEEEEECCCCCCCCcccCCHHHHHHHHHHHH
Confidence 111111100000 000 00000 00 012789999988643 2335578888777778888775 59999999
Q ss_pred HhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCC
Q 038818 258 RYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQ 337 (486)
Q Consensus 258 ~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 337 (486)
+||+.+++|+++.|+ .....+.....++ ..|.++ ..|.++..+++|.++.+++ . .+.+... .+....
T Consensus 233 ~~g~llI~DEv~tG~-R~G~~ga~~~~gv-~PDi~~--~gK~lggG~p~~av~~~~~-i-~~~~~~~-~~~~~~------ 299 (433)
T PRK00615 233 RTGSLSIMDEVVTGF-RVAQGGAAAIYHV-KPDITV--YGKILGGGLPAAAVVAHKS-I-MDHLAPE-GTIFQA------ 299 (433)
T ss_pred HcCCEEEEEcccccc-cccHhHHHHhcCC-CCCeEE--EcccccCCcceeeeeecHH-H-HhhhcCC-CCcccC------
Confidence 999999999999654 2211111111233 567766 4798886566888887654 2 2222111 111000
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC---CCe--EEecCCCeeEEEEEeecCC
Q 038818 338 VVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGD---NRF--EIVAPRNFAVVCFRVLPSA 412 (486)
Q Consensus 338 ~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---~~~--~~~~~~~~~~v~f~~~~~~ 412 (486)
.|. .+.+....+...++..+..+ +..++..++.++|.+.|++. .++ .... ...++.+.+....
T Consensus 300 ------~T~-~g~p~~~aa~la~L~~i~~~---~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r--~G~~~~i~~~~~~ 367 (433)
T PRK00615 300 ------GTL-SGNPLAMAAGKASINLCREQ---GFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR--YGSMFSFFFNENR 367 (433)
T ss_pred ------CCC-cccHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe--eceEEEEEEeCCC
Confidence 010 01111223333444444332 34566666777775555431 123 3222 2334555554321
Q ss_pred CC-CCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 413 SG-LGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 413 ~~-~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
.. ..+. .....+...++...+.++|++ +.+..+.. . .+ +...|++|||+++++++++++.+.
T Consensus 368 ~~~~~~~--~~~~~~~~~~~~~~l~~~Gv~-~~~~~~~~-~----~l-s~~ht~~did~~~~a~~~~~~~~~ 430 (433)
T PRK00615 368 PNNLAEA--QLSDIEAFQTFYQSAFSKGVY-LSPSPFEA-S----FL-SSAHSMENLDYAQNVLIDSLEKVF 430 (433)
T ss_pred CCChHHH--hhCCHHHHHHHHHHHHHCCee-ecCccccc-c----ce-ecCCCHHHHHHHHHHHHHHHHHHh
Confidence 00 0000 000134456788888899974 33322111 1 22 234477799999999999998775
No 345
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.43 E-value=1.3e-09 Score=110.73 Aligned_cols=313 Identities=14% Similarity=0.041 Sum_probs=175.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.+.+.++.+.|++++..... ...+|+++||+|+..|+..||... | +..+|......|-...-+...
T Consensus 82 ~~~~~~la~~l~~~~p~~~~------~~~~f~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~~s~ 147 (421)
T PRK09792 82 YESYVTLAEKINALAPVSGQ------AKTAFFTTGAEAVENAVKIARAHT-------G-RPGVIAFSGGFHGRTYMTMAL 147 (421)
T ss_pred CHHHHHHHHHHHHhCCCCCC------ceEEEeCChHHHHHHHHHHHHHhc-------C-CCeEEEECCCcCCccHHHHhh
Confidence 34455666777877643211 157889999999999999998641 1 222344444455443333333
Q ss_pred cCC--------C--CCCeEEEecCCCCCcc---cCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC-C---chHHHH
Q 038818 192 AGI--------D--PKNFRAIKTTKSSSFT---LTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD-P---LGPLCD 254 (486)
Q Consensus 192 ~G~--------g--~~~v~~v~~d~~~~~~---~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id-p---l~~I~~ 254 (486)
.|. + ...++.+|...+.++. -+++.+++.+++.. ....+.+|+++...++.|..- | +++|.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~ 226 (421)
T PRK09792 148 TGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDI-EAKQVAAIIFEPVQGEGGFNVAPKELVAAIRR 226 (421)
T ss_pred cCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcc-CCCceEEEEEccccCCCCCccCCHHHHHHHHH
Confidence 221 1 1134455543211111 13467777775421 123356777777778888653 5 899999
Q ss_pred HHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCC
Q 038818 255 IAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASD 334 (486)
Q Consensus 255 i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~ 334 (486)
+|++||+++++|.++.++......+....-++ ..|.++ ..|.++..++.|.++.+++ .. +.+.. ...
T Consensus 227 lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~-~pDi~t--~gK~l~~G~pigav~~~~~-i~-~~~~~--~~~------ 293 (421)
T PRK09792 227 LCDEHGIVMIADEVQSGFARTGKLFAMDHYAD-KPDLMT--MAKSLAGGMPLSGVVGNAN-IM-DAPAP--GGL------ 293 (421)
T ss_pred HHHHcCCEEEEeccccCCCCCCchhHHHhcCC-CCcEEE--eehhhcCCCceEEEEEcHH-HH-hccCC--CCc------
Confidence 99999999999999987533211111000112 467544 4799987788899887544 21 22210 000
Q ss_pred CCCccCCCCccccCCCCCCchHHH---HHHHHhchHHHHHHHHHHHHHHHHHHHHHhC----CCCeEEecCCC--eeEEE
Q 038818 335 SKQVVDYKDWQITLSRRFRALKLW---LVLRSFGVANLRNFLRSHVRMAQLFQELVGG----DNRFEIVAPRN--FAVVC 405 (486)
Q Consensus 335 ~~~~~~~~~~~~~~sr~~~~l~~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~--~~~v~ 405 (486)
..+.....+.+. +.++.+..+ +..++..++.+++.+.|++ .|. +..+. ..++.
T Consensus 294 ------------~~T~~gnpl~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~l~~~~p~---v~~vrG~Gl~~~ 355 (421)
T PRK09792 294 ------------GGTYAGNPLAVAAAHAVLNIIDKE---SLCERANQLGQRLKNTLIDAKESVPA---IAAVRGLGSMIA 355 (421)
T ss_pred ------------CCCCCCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHhCCC---cceecccceEEE
Confidence 011122334433 444444332 4555666677777666654 332 22222 23455
Q ss_pred EEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 406 FRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 406 f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
+.+.+... ........+++.+.+.++|+++. +.. ....++|+.. ....++++|+++++.|.+++.
T Consensus 356 ie~~~~~~-------~~~~~~~~~~l~~~~~~~Gv~i~-~~g-~~~~~irl~P-~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 356 AEFNDPQT-------GEPSAAIAQKIQQRALAQGLLLL-TCG-AYGNVIRFLY-PLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred EEecCCcc-------CCcchHHHHHHHHHHHHCCcEEe-ecC-CCCCEEEEeC-CCcCCHHHHHHHHHHHHHHHh
Confidence 55543210 00001345678888889998542 211 1146899987 345788899999999988764
No 346
>PRK06917 hypothetical protein; Provisional
Probab=99.42 E-value=6.8e-10 Score=113.24 Aligned_cols=333 Identities=11% Similarity=0.056 Sum_probs=178.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.+.+.++.+.|++++..... ..+|+++||+|+..|+..||.+...+ +..+ +..++......|-...-+...
T Consensus 73 ~~~~~~lae~L~~~~p~~~~-------~v~f~~sGsEAve~AlklAr~~~~~r-g~t~-r~~ii~~~~~yHG~t~~als~ 143 (447)
T PRK06917 73 SEPAEKLAKKLSDLSPGDLN-------WSFFVNSGSEANETAMKIAIQHFQER-GIQG-KHKILSRWMSYHGITMGALSM 143 (447)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCChHHHHHHHHHHHHHHHHhc-CCCC-CCEEEEECCCcCCccHHHHHh
Confidence 45566677888888743222 57899999999999999998764221 2111 223333444455443333333
Q ss_pred cCCCC---------CCeEEEecCCCCCc----------ccCHHHHHHHHHHHHHCCCccEEEEeecCCccc-cccCC---
Q 038818 192 AGIDP---------KNFRAIKTTKSSSF----------TLTPESLQAAIDLDIQAGLIPLFLCATVGTTAI-TTVDP--- 248 (486)
Q Consensus 192 ~G~g~---------~~v~~v~~d~~~~~----------~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~-G~idp--- 248 (486)
.|... ..+..+|....... .-+.+.|++.++... ...+..|++.-..... |.+-|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~--~~~iAAvi~EPi~g~~gG~~~p~~~ 221 (447)
T PRK06917 144 SGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIG--AEHIAAFIAEPIIGAAGAAVVPPKG 221 (447)
T ss_pred cCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcC--CCceEEEEEeccccCcCceecCCHH
Confidence 33210 12233332110000 013456676665321 1235567776544433 34433
Q ss_pred -chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcCCcc
Q 038818 249 -LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALSTNPE 326 (486)
Q Consensus 249 -l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~~~~ 326 (486)
+++|.++|++||+.+++|+++.|+.....-+.....++ ..|.+++ .|.++..+ +.|.++.+++ .. +.+.....
T Consensus 222 fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv-~PDi~~~--gK~l~~G~~Pi~a~~~~~~-i~-~~~~~~~~ 296 (447)
T PRK06917 222 YYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGV-EPDIMTL--GKGLGAGYTPIAATVVSDR-VM-EPILRGSR 296 (447)
T ss_pred HHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCC-CCCEEEe--eehhccCCcceEEEEEcHH-HH-HHHhccCc
Confidence 89999999999999999999876422221111111233 4687766 78888765 6788887654 22 23321111
Q ss_pred cccCccCCCCCccCCCCccccCCCCCCchHHH---HHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEecCC--C
Q 038818 327 FLRNKASDSKQVVDYKDWQITLSRRFRALKLW---LVLRSFGVANLRNFLRSHVRMAQLFQELVGGDN-RFEIVAPR--N 400 (486)
Q Consensus 327 y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~--~ 400 (486)
.+.. ..+.....+.+. .+++.+..+ ++.++..++.++|++.|+++. ...++... .
T Consensus 297 ~~~~----------------~~T~~gnpl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~ 357 (447)
T PRK06917 297 SIMS----------------GHTLSANPLSAATALAVLEYMEKH---NLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGK 357 (447)
T ss_pred cccc----------------ccCCCCCHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeec
Confidence 1110 011122333333 344444222 356677777777777776531 12122111 1
Q ss_pred eeEEEEEeecCC-CCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeE----CCEeEEEEEecCCCCcHHHHHHHHHHH
Q 038818 401 FAVVCFRVLPSA-SGLGDGKANEGANELNRKLLESINASGQLYVSHGMV----AGIYFIRFAVGATLTEDRHVIAAWKVV 475 (486)
Q Consensus 401 ~~~v~f~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~~~~~lR~~~~~~~tt~~did~~i~~l 475 (486)
..++.+.+..+. .+.. .....+....+.+.+.++|.++ .+... .....+|++. ....|++|||+++++|
T Consensus 358 Gl~~~ie~~~~~~~~~~----~~~~~~~~~~~~~~~~~~Gvl~-~~~~~~~~g~~~~~i~l~P-pl~it~~eid~~~~~l 431 (447)
T PRK06917 358 GLLIGVEFVADKKTKQP----FSKSQAVASELISVAAKNGLLL-YPAVAGQDGKEGDAVIIAP-PMTITYSELDELLSIF 431 (447)
T ss_pred ceEEEEEEeccCCcCCC----CcchhHHHHHHHHHHHhCCcEE-EecccccCCCCCCEEEEEC-CCcCCHHHHHHHHHHH
Confidence 234444443211 0000 0011245667888888999854 32211 1235788876 3467888999999999
Q ss_pred HHHHHHHhhc
Q 038818 476 QEKLDGILAT 485 (486)
Q Consensus 476 ~~~~~~l~~~ 485 (486)
.++++++..+
T Consensus 432 ~~~l~~~~~~ 441 (447)
T PRK06917 432 AKSVEEMMQK 441 (447)
T ss_pred HHHHHHHHHh
Confidence 9999887654
No 347
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.42 E-value=2.1e-10 Score=116.43 Aligned_cols=312 Identities=11% Similarity=0.020 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCC
Q 038818 115 ENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGI 194 (486)
Q Consensus 115 e~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~ 194 (486)
..++.++++++++-+- ...+++.+||+|+..|+..||.....+ +..+ +..+|..+...|-...-+....|-
T Consensus 90 ~~~la~~l~~~~~~~~-------~~v~f~~sGseA~e~AlklAr~~~~~~-~~~~-r~~il~~~~~yHG~t~~~~s~~~~ 160 (427)
T TIGR00508 90 AIELCQKLVKMTPNAL-------DCVFLADSGSVAVEVALKMALQYWQAK-GEKN-RQKFLTIRSGYHGDTFGAMSVCDP 160 (427)
T ss_pred HHHHHHHHHhhCCCCC-------CEEEEeCCcHHHHHHHHHHHHHHHHhh-CCCC-ccEEEEEcCCcCCccHhhhcccCC
Confidence 4456677888764321 267999999999999999999864321 1111 234555565666443333332221
Q ss_pred C----------CCCeEEEecCCCCCc-----ccCHHHHHHHHHHHHHCCCccEEEEeecC-Cccccc----cCCchHHHH
Q 038818 195 D----------PKNFRAIKTTKSSSF-----TLTPESLQAAIDLDIQAGLIPLFLCATVG-TTAITT----VDPLGPLCD 254 (486)
Q Consensus 195 g----------~~~v~~v~~d~~~~~-----~~d~~~L~~~l~~~~~~g~~p~~vv~~~g-tt~~G~----idpl~~I~~ 254 (486)
. ...+..+|... ..+ .-|+++++++++.. +....+|++... ....|. .+++++|.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~l~~~l~~~---~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~ 236 (427)
T TIGR00508 161 ENSMHSLYKGYLPEQIFAPAPQ-NRFDEEWNEEAITPLAKLMELH---SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQA 236 (427)
T ss_pred cccccccccccCCCCeEcCCCC-ccccchhHHHHHHHHHHHHHhc---CCcEEEEEEechhcCcCCcccCCHHHHHHHHH
Confidence 0 01222333211 011 12567788777642 223445666654 333343 367999999
Q ss_pred HHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcCC--cccccCc
Q 038818 255 IAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALSTN--PEFLRNK 331 (486)
Q Consensus 255 i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~~--~~y~~~~ 331 (486)
+|++||+.+++|+++.|+.....-+.....++ ..|.+++ .|.+++.+ +++.++.+++ . .+.+... ..+....
T Consensus 237 lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v-~pDi~~~--gK~l~gG~~p~~a~~~~~~-~-~~~~~~~~~~~~~~~~ 311 (427)
T TIGR00508 237 LCKQYDILLIADEIATGFGRTGKLFACEHAGV-VPDILCV--GKALTGGYMTLSATVTTDK-V-AQTISSGEAGCFMHGP 311 (427)
T ss_pred HHHHcCCEEEEeccccCCCcCCccchhhhcCC-CCCEEEe--chhhhcCcccceEEEEcHH-H-HHHHhcCCCCccccCC
Confidence 99999999999999865322111111111233 4677764 78887664 5677776644 2 2233211 1111110
Q ss_pred cCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC--CCeeEEEEEee
Q 038818 332 ASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP--RNFAVVCFRVL 409 (486)
Q Consensus 332 ~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v~f~~~ 409 (486)
|+. +.+.....+..++..+..+ +..++..++.++|++.|+++.....+.. ....++.+.+.
T Consensus 312 -------------T~~-g~p~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~ 374 (427)
T TIGR00508 312 -------------TFM-GNPLACAVAEASLAILLEG---EWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMY 374 (427)
T ss_pred -------------CCC-cCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEEC
Confidence 111 1122223334444444222 3467788888888888876522111111 12345555554
Q ss_pred cCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 410 PSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
.+. ....+.+++.++|+. +.+. + ..+|++. ....|++|||++++++++++++
T Consensus 375 ~~~--------------~~~~~~~~l~~~Gv~-~~~~---~-~~l~~~p-pl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 375 KPV--------------NVEELQKKFVEQGVW-IRPF---G-KLIYVMP-PYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred Ccc--------------CHHHHHHHHHHCCeE-EEec---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHhc
Confidence 221 124677788888974 3332 1 3688876 3457888999999999998753
No 348
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.42 E-value=9.5e-10 Score=112.61 Aligned_cols=333 Identities=12% Similarity=0.030 Sum_probs=181.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
++...++.+.|++++.-+. ...+|+++||+||..|+..||...... +..+ +..+|......|-...-+..+
T Consensus 89 ~~~~~~lae~L~~~~p~~~-------~~v~f~~sGsEAve~AlKlAr~~~~~~-g~t~-r~~ii~~~~~yHG~t~ga~s~ 159 (466)
T PRK07030 89 HEPVIELSERLVKITPPGL-------SRCFYADNGSSAIEVALKMSFHYWRNR-GKPR-KKRFVTLTNSYHGETLAAMSV 159 (466)
T ss_pred CHHHHHHHHHHHHhCCCCc-------CEEEEeCCcHHHHHHHHHHHHHHHHHh-CCCC-CcEEEEECCCcCcccHHHHhc
Confidence 4555667788888763211 257999999999999999998764221 1111 223444555556443334433
Q ss_pred cCCCC---------CCeEEEecCCCCC--c--------ccCHHHHHHHHHHHHHCCCccEEEEeec-CCccccccCC---
Q 038818 192 AGIDP---------KNFRAIKTTKSSS--F--------TLTPESLQAAIDLDIQAGLIPLFLCATV-GTTAITTVDP--- 248 (486)
Q Consensus 192 ~G~g~---------~~v~~v~~d~~~~--~--------~~d~~~L~~~l~~~~~~g~~p~~vv~~~-gtt~~G~idp--- 248 (486)
.|... ..+..+|...... . .-+++.+++.++. .+..+..|++.- .....|.+-|
T Consensus 160 ~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~---~~~~iAAvi~EP~iqg~gG~~~~~~~ 236 (466)
T PRK07030 160 GDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAE---HHDEIAAVIVEPLIQGAGGMRMYHPV 236 (466)
T ss_pred cCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEecccccCCCcccCCHH
Confidence 33210 1234444321000 0 1135667777753 223455677765 3555576644
Q ss_pred -chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcCCcc
Q 038818 249 -LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALSTNPE 326 (486)
Q Consensus 249 -l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~~~~ 326 (486)
+++|.++|++||+.+++|+.+.|+.....-+....-++ ..|.+++ -|.+++.+ +.|.++.+++- . +.+....+
T Consensus 237 yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~ei-~-~~~~~~~~ 311 (466)
T PRK07030 237 YLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGI-RPDFLCL--SKALTGGYLPLAAVLTTDTV-Y-QAFYDDYP 311 (466)
T ss_pred HHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCC-CCCEEee--ehhccCCcccceEEEecHHH-H-HHHhcccc
Confidence 89999999999999999999876533221111112234 5788887 68888774 78888887652 2 22311100
Q ss_pred cccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC--CCeeEE
Q 038818 327 FLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP--RNFAVV 404 (486)
Q Consensus 327 y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v 404 (486)
-. . .+....+.....+++.+++..+-.-.-.++.++..++.++|++.|+++.....+.. -...++
T Consensus 312 ~~--------~-----~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~ 378 (466)
T PRK07030 312 TL--------R-----AFLHSHSYTGNPLACAAALATLDIFEQDNVIENNRALARRMAEATAHLADHPHVAEVRQTGMIL 378 (466)
T ss_pred cc--------c-----ccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCEEEeEeceeEE
Confidence 00 0 00001111223444444443331111124567777888888888866422211211 122344
Q ss_pred EEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 405 CFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 405 ~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
.+.+....... .+ .........++.+.+.++|.+. .+. + ..+|+.. ....|++|||.+++.+++.++++.
T Consensus 379 gie~~~~~~~~-~~--~~~~~~~~~~i~~~~~~~Gvl~-~~~---g-~~i~~~P-pl~it~~eid~~~~~l~~al~~~~ 448 (466)
T PRK07030 379 AIEMVQDKASK-TP--YPWQERRGLKVYQHALERGALL-RPL---G-SVVYFLP-PYVITPEQIDFLAEVASEGIDIAT 448 (466)
T ss_pred EEEeccCcccc-cc--CcchhHHHHHHHHHHHHCCeEE-Eec---C-CEEEEEC-CccCCHHHHHHHHHHHHHHHHHHh
Confidence 44443211000 00 0001123456788888899753 321 2 4688876 467889999999999999998873
No 349
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.42 E-value=5.4e-10 Score=113.28 Aligned_cols=318 Identities=11% Similarity=-0.002 Sum_probs=176.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
+..+.++.+.|++++...- ...+|+++||+|+..|+..||.....+ +..+ +..+|......|-.-.-+...
T Consensus 86 ~~~~~~lae~L~~~~p~~~-------~~v~f~~sGseAve~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~~a~s~ 156 (429)
T PRK06173 86 HEPAVELAQKLLEILPPSL-------NKIFFADSGSVAVEVAMKMALQYQQAK-GEVQ-RTKFATIRSGYHGDTWHAMSV 156 (429)
T ss_pred CHHHHHHHHHHHhhCCCCc-------CEEEEeCCchHHHHHHHHHHHHHHHHh-CCCC-CcEEEEECCCcCCcchhhhcc
Confidence 3444566677777763211 257999999999999999999753222 2111 223444444455432222222
Q ss_pred cC--------C--CCCCeEEEecCCCC---C-cccCHHHHHHHHHHHHHCCCccEEEEeecC-CccccccCC----chHH
Q 038818 192 AG--------I--DPKNFRAIKTTKSS---S-FTLTPESLQAAIDLDIQAGLIPLFLCATVG-TTAITTVDP----LGPL 252 (486)
Q Consensus 192 ~G--------~--g~~~v~~v~~d~~~---~-~~~d~~~L~~~l~~~~~~g~~p~~vv~~~g-tt~~G~idp----l~~I 252 (486)
.| . ....+..+|..... . ..-+++.|++.|+. .+..+..|++.-. ....|.+-| +++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~---~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l 233 (429)
T PRK06173 157 CDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQ---KGDEIAALILEPVVQGAGGMYFYSPTYLVKA 233 (429)
T ss_pred CCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHh---CCCcEEEEEEcchhhccCCcccCCHHHHHHH
Confidence 11 0 01123444432100 0 01246667777753 2234556676653 555566533 8999
Q ss_pred HHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcCCc--cccc
Q 038818 253 CDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALSTNP--EFLR 329 (486)
Q Consensus 253 ~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~~~--~y~~ 329 (486)
.++|++||+++++|+++.|+.-...-+.....++ ..|.++ ..|.+++.+ ++|.++.+++ .. +.+.... .+..
T Consensus 234 ~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv~--~gK~l~gG~~p~~a~~~~~~-i~-~~~~~~~~~~~~~ 308 (429)
T PRK06173 234 RELCDQYGVLLIFDEIATGFGRTGKLFALEHAGV-VPDIMC--IGKALTGGYLTLSATITTEA-IA-QTICSGEAKCFMH 308 (429)
T ss_pred HHHHHHcCCeEEecchhcCCCcCCcchHHHhcCC-CCCEEE--eehhhhCCccccceEEecHH-HH-HHHhcCCCCcccc
Confidence 9999999999999999965321111111111233 478777 578887664 6787777654 21 2221100 0111
Q ss_pred CccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC--CCeeEEEEE
Q 038818 330 NKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP--RNFAVVCFR 407 (486)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v~f~ 407 (486)
.. |.. +.+....+...+++.+-.+ +..++..++.++|++.|+++.++..+.. -...++.+.
T Consensus 309 ~~-------------T~~-g~p~~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~ie 371 (429)
T PRK06173 309 GP-------------TFM-ANPLACAIAAESIRLLLES---PWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVE 371 (429)
T ss_pred CC-------------CCC-cCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEE
Confidence 10 111 1112223334444444222 3467778888888888875423322221 134455565
Q ss_pred eecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 408 VLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
+..+ ....++.+.+.++|++ +.+. + ..+|+.. ....+++|||++++.|++++.++-
T Consensus 372 l~~~--------------~~~~~i~~~l~e~Gi~-v~~~---g-~~l~~~P-pl~it~~ei~~~~~~l~~~l~~~~ 427 (429)
T PRK06173 372 MKEP--------------VNMATLQPRFVEHGIW-VRPF---G-KLVYIMP-PFIISPDELSQLTSGLLRVLKQEY 427 (429)
T ss_pred eCCc--------------ccHHHHHHHHHHCCeE-EEec---C-CEEEEeC-CccCCHHHHHHHHHHHHHHHHHHh
Confidence 5432 1134677788888974 3332 2 4799987 467889999999999999987653
No 350
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.42 E-value=4e-11 Score=109.22 Aligned_cols=332 Identities=14% Similarity=0.126 Sum_probs=188.6
Q ss_pred HHHHHHhh-cCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcccc
Q 038818 90 LGEMLSSG-FNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRE 168 (486)
Q Consensus 90 ~~~~l~~~-~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~ 168 (486)
.++++++. +..+.+.|+...+-..+-+.+.+++.+.+||.-+. .++.+|+|+..+.+++....-.+ ..+
T Consensus 54 ~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~-----~NIalTnGSQs~fFYlfNlF~G~-----~sd 123 (417)
T COG3977 54 LAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITA-----QNIALTNGSQSAFFYLFNLFAGR-----RSD 123 (417)
T ss_pred HHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCcc-----ceeeecCCccchHHHHHHHhcCc-----cCC
Confidence 34555443 34456678777777888888999999999997542 37888998877777765543322 122
Q ss_pred CCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEec------CCCC--CcccCHHHHHHHHHHHHHCCCccEEEEeecCC
Q 038818 169 NISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKT------TKSS--SFTLTPESLQAAIDLDIQAGLIPLFLCATVGT 240 (486)
Q Consensus 169 ~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~------d~~~--~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gt 240 (486)
|..+.++ .+-..-|- .+.++|.+.=..|.. ++.+ .++.|.++|+ +.+.+ -+|+++-++
T Consensus 124 G~~k~il-lPLaPeYi-----GY~d~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~--i~e~~------g~ic~SRPt 189 (417)
T COG3977 124 GTEKKIL-LPLAPEYI-----GYADAGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLH--IGEST------GAICVSRPT 189 (417)
T ss_pred CcceeEe-eccChhhc-----cccccccCccceeeccCCcccccccceeeccCHHHcc--ccccc------ceEEecCCC
Confidence 3333333 33222211 112222111112211 1122 3677888886 33443 379999999
Q ss_pred cccccc---CCchHHHHHHHHhCceEEeeccccchhc--cCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCch
Q 038818 241 TAITTV---DPLGPLCDIAKRYSIWVHVDAAYAGSAC--ICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPN 315 (486)
Q Consensus 241 t~~G~i---dpl~~I~~i~~~~g~~lhvD~a~g~~~~--~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~ 315 (486)
|+||.+ +.+.+|.+++++||+.+++|.|||..+- .+.+....+ ..--.+++|..|.+....-||+++..++
T Consensus 190 NPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w---~~NiilC~SLSK~GLPG~R~GIiIane~- 265 (417)
T COG3977 190 NPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLW---NENIILCMSLSKLGLPGSRCGIIIANEK- 265 (417)
T ss_pred CCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccccC---CCCEEEEeehhhcCCCCcceeEEEccHH-
Confidence 999988 6789999999999999999999987542 111111111 1222568899998887778998776544
Q ss_pred HHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHH----HHHHhchHHHHHHHHHH-HHHHHHHHHHHhCC
Q 038818 316 ALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWL----VLRSFGVANLRNFLRSH-VRMAQLFQELVGGD 390 (486)
Q Consensus 316 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~----~l~~~g~~g~~~~~~~~-~~~a~~l~~~L~~~ 390 (486)
.. ++++....-+ ++..+|...+++.-+ .|..+...-++-..++. ...-..|+..|-+.
T Consensus 266 vi-qaitnmn~ii----------------sLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~ 328 (417)
T COG3977 266 VI-QAITNMNGII----------------SLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEY 328 (417)
T ss_pred HH-HHHHhcccee----------------eecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCcc
Confidence 32 2333222111 122233222222111 01111111111111111 11222334444433
Q ss_pred CCeEEecCCCeeEEEE-EeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeE---------CCEeEEEEEecC
Q 038818 391 NRFEIVAPRNFAVVCF-RVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMV---------AGIYFIRFAVGA 460 (486)
Q Consensus 391 ~~~~~~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---------~~~~~lR~~~~~ 460 (486)
.+.+ ..|+..++.+ ++..- ......|+++|.+.|++++++..+ +.+.++|++..
T Consensus 329 -~~~i-HkpEGAIFlWLWf~dL-------------PItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~- 392 (417)
T COG3977 329 -RCLI-HKPEGAIFLWLWFKDL-------------PITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYV- 392 (417)
T ss_pred -ceee-ecCCcceeehhhhccC-------------CCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEecC-
Confidence 2333 4667777655 44332 223567899999999987766543 23678998763
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 461 TLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 461 ~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
-+++.|++-+..|.+.++++-.
T Consensus 393 --~~~~~ie~Gva~lae~ve~~yq 414 (417)
T COG3977 393 --PEPEKIEKGVAILAEEVERAYQ 414 (417)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHh
Confidence 3677899999999988877643
No 351
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.40 E-value=7.6e-10 Score=113.20 Aligned_cols=315 Identities=15% Similarity=0.079 Sum_probs=176.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH
Q 038818 111 ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ 190 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 190 (486)
.++.+.++.+.|+++++...+ ..+|++|||+|+..|+..||... | +..+|......|-....+..
T Consensus 111 ~~~~~~~lae~L~~~~p~~~~-------~v~f~~sGseAve~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~a~s 175 (459)
T PRK06082 111 TNETAIECAEKLTEIAGGELN-------RVLFAPGGTSAIGMALKLARHIT-------G-NFKVVSLWDSFHGASLDAIS 175 (459)
T ss_pred CCHHHHHHHHHHHHhCCCCCC-------EEEECCCcHHHHHHHHHHHHHhc-------C-CCEEEEEeCCCcCccHHHHh
Confidence 345566777888888753222 57999999999999999998652 1 23344455556655444444
Q ss_pred HcCCC---------CCCeEEEecCCCCC--c-cc------CHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---c
Q 038818 191 IAGID---------PKNFRAIKTTKSSS--F-TL------TPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---L 249 (486)
Q Consensus 191 ~~G~g---------~~~v~~v~~d~~~~--~-~~------d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l 249 (486)
..|-. ...+..+|....-. + .. +++.|++.++. .+ .+.+|++.......+.+-| +
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~---~~-~vAavIvEPv~g~g~~~~~~~yl 251 (459)
T PRK06082 176 VGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEK---EG-GIGAFIAEAVRNTDVQVPSKAYW 251 (459)
T ss_pred hcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhc---CC-CEEEEEECCccCCCCcCCCHHHH
Confidence 43320 01234444221000 0 01 13557776653 12 3456776655544333444 8
Q ss_pred hHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcCCcccc
Q 038818 250 GPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALSTNPEFL 328 (486)
Q Consensus 250 ~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~~~~y~ 328 (486)
++|.++|++||+.+++|+++.|+.....-+....-++ ..|.++ .-|.++..+ +.|.++.+++ . ...+. ..+.
T Consensus 252 ~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv-~PDiv~--~gKgl~gG~~P~~av~~~~~-i-~~~~~--~~~~ 324 (459)
T PRK06082 252 KRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGI-EPDILC--IGKGLGGGLVPIAAMITKDK-Y-NTAAQ--ISLG 324 (459)
T ss_pred HHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCC-CCCEEE--ecccccCCCCcceEEEEcHH-H-Hhhcc--CCCC
Confidence 9999999999999999999877432211111111234 578877 479988764 7888888764 2 11111 0000
Q ss_pred cCccCCCCCccCCCCccccCCCCCCchHHHH---HHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEecC--CCee
Q 038818 329 RNKASDSKQVVDYKDWQITLSRRFRALKLWL---VLRSFGVANLRNFLRSHVRMAQLFQELVGGDN-RFEIVAP--RNFA 402 (486)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~--~~~~ 402 (486)
. .+.....+.+.+ ++..+-.+ +..++..++.++|.+.|+++. ...++.. -...
T Consensus 325 --------------~----~T~~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl 383 (459)
T PRK06082 325 --------------H----YTHEKSPLGCAAALATIEVIEQE---GLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGL 383 (459)
T ss_pred --------------C----CCCCcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccc
Confidence 0 111223333333 34444222 456777788888888886531 1111211 1223
Q ss_pred EEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 403 VVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 403 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
++.+.+..+.. ......+....+...+.++|.+. .+. +...+|++. ....|++|||++++++++++.++
T Consensus 384 ~~~ve~~~~~~------~~~~~~~~~~~~~~~~~~~Gvl~-~~~---~~~~i~~~P-pl~it~~eid~~~~~l~~~l~~~ 452 (459)
T PRK06082 384 LWGVELVTDRH------TKERAYDEAEAVLYRCLNNGLSF-KVS---QGNVIQLSP-PLIITREELTQALAILEEAIAKI 452 (459)
T ss_pred eeEEEEccCcc------ccCccHHHHHHHHHHHHhCCCEE-Eec---CCCEEEEeC-CCccCHHHHHHHHHHHHHHHHHH
Confidence 44444432110 00011234567778888899854 322 236789876 23568889999999999998876
Q ss_pred h
Q 038818 483 L 483 (486)
Q Consensus 483 ~ 483 (486)
.
T Consensus 453 ~ 453 (459)
T PRK06082 453 C 453 (459)
T ss_pred h
Confidence 4
No 352
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.40 E-value=7.2e-10 Score=113.41 Aligned_cols=331 Identities=13% Similarity=0.050 Sum_probs=178.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEc-CCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQ-GTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ 190 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t-~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 190 (486)
+..+.++.+.+.+++.-+-. .....+|+ ++||||+..|+..||... | +..+|......|-...-+..
T Consensus 105 ~~~~~~la~~L~~~~p~~~~----~~~~v~f~~~SGSEAve~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~als 172 (464)
T PRK06938 105 TPVKDQFVQDLFASLPEAFA----REAKIQFCGPTGTDAVEAALKLVKTAT-------G-RSTVLSFQGGYHGMSQGALS 172 (464)
T ss_pred CHHHHHHHHHHHHhCccccc----ccceEEEeCCCcHHHHHHHHHHHHHhh-------C-CCeEEEECCccCCccHHHHh
Confidence 34444555666666531100 00024454 799999999999998752 1 23344445455544333443
Q ss_pred HcCC-------C--CCCeEEEecCCCCCc----------ccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---
Q 038818 191 IAGI-------D--PKNFRAIKTTKSSSF----------TLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP--- 248 (486)
Q Consensus 191 ~~G~-------g--~~~v~~v~~d~~~~~----------~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp--- 248 (486)
..|- + ...+..+|....... ..+.+.+++.+++.......+..|++.-.....|.+-|
T Consensus 173 ~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~ 252 (464)
T PRK06938 173 LMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIE 252 (464)
T ss_pred hcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHH
Confidence 3321 0 113455554311000 12467788888643211123566777766666676644
Q ss_pred -chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCccc
Q 038818 249 -LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEF 327 (486)
Q Consensus 249 -l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y 327 (486)
++++.++|++||+.+++|+.+.|+.....-+....-++ ..|.+++ -|.++..++.|.++.+++ + +.+. +..
T Consensus 253 yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv-~PDiv~~--gKglggG~PlsAv~~~~~--~-~~~~--~~~ 324 (464)
T PRK06938 253 WLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGI-IPDVVVL--SKAIGGSLPLAVVVYREW--L-DTWQ--PGA 324 (464)
T ss_pred HHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCC-CCCEEEe--eccccCCCceEEEeehhH--h-hccC--CCC
Confidence 89999999999999999999877532211111111233 5788887 688887788999998754 2 2221 111
Q ss_pred ccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEecC--CCeeEE
Q 038818 328 LRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDN-RFEIVAP--RNFAVV 404 (486)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~--~~~~~v 404 (486)
. ..+-...++++.+++..+..-.-.+..++..++.++|.+.|+++. ...++.. -...++
T Consensus 325 ~------------------~~T~~gnpla~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~ 386 (464)
T PRK06938 325 H------------------AGTFRGNQMAMAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLML 386 (464)
T ss_pred C------------------CCCCCcCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEE
Confidence 0 011112344444444433111112355666777777777775531 1111211 112344
Q ss_pred EEEeecCCCCCCCCC-CccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 405 CFRVLPSASGLGDGK-ANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 405 ~f~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
.+.+...... .+.. ...........+.+.+.++|.++ .+.. .....+|+.. ....|++|||++++++++++.+++
T Consensus 387 gie~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Gll~-~~~g-~~~~~l~~~P-pl~it~~eid~~~~~l~~~l~~~~ 462 (464)
T PRK06938 387 GVEIVDPQGE-PDALGHPPANGELASLIQRECLRRGLIL-ELGG-RHGSVVRFLP-PLIITAEQIDEVAEIFAEAVAAAV 462 (464)
T ss_pred EEEeccCccc-ccccccCCccHHHHHHHHHHHHHCCeEE-eecC-CCCCEEEEEC-CCccCHHHHHHHHHHHHHHHHHHh
Confidence 4444321100 0000 00001234567788888899754 3221 1135799886 457788999999999999998876
Q ss_pred h
Q 038818 484 A 484 (486)
Q Consensus 484 ~ 484 (486)
+
T Consensus 463 ~ 463 (464)
T PRK06938 463 A 463 (464)
T ss_pred c
Confidence 5
No 353
>PRK07483 hypothetical protein; Provisional
Probab=99.40 E-value=1.2e-09 Score=111.23 Aligned_cols=334 Identities=14% Similarity=0.103 Sum_probs=177.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.+...++.+.|++++.-..+ ..+|+++||+|+..|+..||.....+ +..+ +..+|......|-...-+...
T Consensus 72 ~~~~~~lae~L~~~~p~~~~-------~v~f~~sGsEAve~AlklAr~~~~~~-g~~~-r~~Ii~~~~~YHG~t~~a~s~ 142 (443)
T PRK07483 72 TEPAEALADRLVAAAPAGLE-------HVYFVSGGSEAVEAALKLARQYFVEI-GQPQ-RRHFIARRQSYHGNTLGALAI 142 (443)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEcCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCcCHHHhhh
Confidence 34445666777777632111 57899999999999999999764221 2111 222343454555443333333
Q ss_pred cCC---------CCCCeEEEecCCCCCccc-------------CHHHHHHHHHHHHHCCCccEEEEeecCCc-cccccCC
Q 038818 192 AGI---------DPKNFRAIKTTKSSSFTL-------------TPESLQAAIDLDIQAGLIPLFLCATVGTT-AITTVDP 248 (486)
Q Consensus 192 ~G~---------g~~~v~~v~~d~~~~~~~-------------d~~~L~~~l~~~~~~g~~p~~vv~~~gtt-~~G~idp 248 (486)
.|- ....+..+|... .++. .+++|++++... ....+..|++..... ..|.+-|
T Consensus 143 s~~~~~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvivEPiqg~~gG~~~~ 218 (443)
T PRK07483 143 GGNAWRREPFAPLLIEAHHVSPCY--AYREQRAGESDEAYGQRLADELEAKILEL--GPDTVAAFVAETVVGATAGAVPP 218 (443)
T ss_pred cCCcccccccCCCCCCCEEeCCCc--cccccccCCCHHHHHHHHHHHHHHHHHhc--CCCceEEEEEeCcccCcCCeEeC
Confidence 221 111233443221 1111 125566655421 112345666665443 2465554
Q ss_pred ----chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcC
Q 038818 249 ----LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALST 323 (486)
Q Consensus 249 ----l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~ 323 (486)
+++|.++|++||+.+++|+++.|+.....-+.....++ ..|.+++ -|.++..+ +.|.++++++- .+.+..
T Consensus 219 ~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~~i--~~~~~~ 293 (443)
T PRK07483 219 VPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGV-APDLVTI--AKGLGAGYQPIGAVLASDRI--YDAIAD 293 (443)
T ss_pred CHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCC-CCCeeee--hhhhccCccccEEEEEcHHH--HHHHhc
Confidence 89999999999999999999876532211111111233 5788887 68888765 78888887652 222321
Q ss_pred CcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEecCC--C
Q 038818 324 NPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGD-NRFEIVAPR--N 400 (486)
Q Consensus 324 ~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~~~~~~--~ 400 (486)
.+..+.. ..+-....+++.++++.+..-.-.+..++..++.++|++.|+++ ....++... .
T Consensus 294 ~~~~~~h----------------~~T~~gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~ 357 (443)
T PRK07483 294 GSGFFQH----------------GHTYLGHATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQHPHVGDIRGR 357 (443)
T ss_pred CCCcccc----------------CCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeec
Confidence 1111100 01112344444444444311111245666777777777777542 122112111 1
Q ss_pred eeEEEEEeecCC-CCCCCCCCccchHHHHHHHHHHHHhcCcEEEeee-eECC--EeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 401 FAVVCFRVLPSA-SGLGDGKANEGANELNRKLLESINASGQLYVSHG-MVAG--IYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 401 ~~~v~f~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~~--~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
..++.+.+..+. .+.. ..........+.+.+.++|.++.... ..++ ...+|+.. ....+++|||+++++|+
T Consensus 358 Glm~gie~~~~~~~~~~----~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~P-pL~it~~eid~~~~~l~ 432 (443)
T PRK07483 358 GLFVGVELVADRATKAP----FDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAP-PFIITAAQIDEIVERLG 432 (443)
T ss_pred ccEEEEEEeecccccCC----CCchhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEEC-CCCCCHHHHHHHHHHHH
Confidence 233444443211 0000 00002345677888889998543221 1111 25799887 45779999999999999
Q ss_pred HHHHHHhh
Q 038818 477 EKLDGILA 484 (486)
Q Consensus 477 ~~~~~l~~ 484 (486)
++++++.+
T Consensus 433 ~~l~~~~~ 440 (443)
T PRK07483 433 DAIDAALA 440 (443)
T ss_pred HHHHHHHh
Confidence 99987764
No 354
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.40 E-value=8.5e-10 Score=112.94 Aligned_cols=333 Identities=12% Similarity=0.028 Sum_probs=176.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHc
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIA 192 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 192 (486)
....++.+.|.+++.-.... .+....+|+++||+||..|+.+||...... +..+ +..+|......|-...-+....
T Consensus 107 ~~~~~lae~L~~~~p~~~~~--~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~-g~~~-r~~ii~~~~syHG~t~gals~~ 182 (472)
T PRK08742 107 EPAVQLAEQLLAIAPRQDGR--APLSKVFYADNGSAGVEVALKMAFHYFHNR-GEHR-RTRFIALENGYHGETIGALAVG 182 (472)
T ss_pred HHHHHHHHHHHHhCCCcccC--CCCCEEEEeCCchHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCCchhhhhcc
Confidence 44556667788776321000 001257999999999999999999864322 2111 2334445555554433333333
Q ss_pred CCC---------CCCeEEEecCCCCC--c--------ccCHHHHHHHHHHHHHCCCccEEEEeec-CCccccccCC----
Q 038818 193 GID---------PKNFRAIKTTKSSS--F--------TLTPESLQAAIDLDIQAGLIPLFLCATV-GTTAITTVDP---- 248 (486)
Q Consensus 193 G~g---------~~~v~~v~~d~~~~--~--------~~d~~~L~~~l~~~~~~g~~p~~vv~~~-gtt~~G~idp---- 248 (486)
|.+ ...+..+|...... . .-+++.+++.++. .+..+..|++.- .....|.+-|
T Consensus 183 ~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~iAAvI~EPviqg~gG~~~~p~~f 259 (472)
T PRK08742 183 DIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQ---SPGEICALILEPRLQCAGGMRMHHPAY 259 (472)
T ss_pred CCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEccccccCCCcccCCHHH
Confidence 221 01234444421000 0 0135667777652 223455666665 2445566533
Q ss_pred chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcCCccc
Q 038818 249 LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALSTNPEF 327 (486)
Q Consensus 249 l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~~~~y 327 (486)
++++.++|++||+.|++|+.+.|+.....-+.....++ ..|.+++ -|.+++.+ +.|.++.+++- .+.+.....
T Consensus 260 l~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv-~PDiv~~--gKgl~gG~~Plaav~~~~ei--~~~~~~~~~- 333 (472)
T PRK08742 260 LRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGV-MPDLLCL--SKGLTGGFLPLSAVLATQQL--YDAFLDDSR- 333 (472)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCC-CCCEEEE--cccccCCCCCcceeeccHHH--HHHhhccCc-
Confidence 89999999999999999999876533221111111234 5788887 68887664 68888887552 122321100
Q ss_pred ccCccCCCCCccCCCCccccCCCCCCchHHHHHH---HHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC--Cee
Q 038818 328 LRNKASDSKQVVDYKDWQITLSRRFRALKLWLVL---RSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR--NFA 402 (486)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l---~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~--~~~ 402 (486)
.. .+....+.....+++.+++ ..+-.++ +.++..++.++|++.++......++.+. ...
T Consensus 334 --~~-----------~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~---l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~Gl 397 (472)
T PRK08742 334 --ER-----------AFLHSHSYTGNPLACAAALATLDIFADDD---VIARNQPTAARMTQLAAQIGEHPHVADVRQAGM 397 (472)
T ss_pred --cC-----------ccCcCCCCCccHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHhcCCCeeeEeccce
Confidence 00 0000111122344444444 3343333 4455556666666555433222122111 123
Q ss_pred EEEEEeecCCCCCCCCCCc-cchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 403 VVCFRVLPSASGLGDGKAN-EGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 403 ~v~f~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
++.+.+..+... .+. ........++.+.+.++|.+. .+. + +.+|+.. ....|++|||++++.|++++++
T Consensus 398 ~~giel~~~~~~----~~~~~~~~~~~~~~~~~~~~~Gll~-~~~---g-~vi~~~P-pL~it~~ei~~~~~~l~~~l~~ 467 (472)
T PRK08742 398 VVAFELTRGGNK----RTPFPPAARVGLHAYRAALARGVVL-RPL---G-DVLYWMP-PYCVDEAQLALLADTTRHAIDE 467 (472)
T ss_pred EEEEEeccCccc----cccCCchhHHHHHHHHHHHHCCeEE-Eec---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHH
Confidence 444444321100 000 001233456777888889754 221 2 4799987 4678999999999999999988
Q ss_pred Hhh
Q 038818 482 ILA 484 (486)
Q Consensus 482 l~~ 484 (486)
+++
T Consensus 468 ~~~ 470 (472)
T PRK08742 468 AVA 470 (472)
T ss_pred Hhc
Confidence 764
No 355
>PRK07481 hypothetical protein; Provisional
Probab=99.39 E-value=1e-09 Score=112.07 Aligned_cols=336 Identities=13% Similarity=0.067 Sum_probs=175.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
+..+.++.+.|+++++-+.. ...+|+++||||+..|+.+||..... .|..+ +..+|......|-...-+...
T Consensus 85 ~~~~~~lae~L~~~~~~~~~------~~v~f~~sGsEAve~AlklAr~~~~~-~g~~~-r~~ii~~~~~yHG~t~ga~s~ 156 (449)
T PRK07481 85 HPRAIELSYELIDMFAPEGM------RRVFFSSGGSDSVETALKLARQYWKV-RGQPE-RTKFISLKQGYHGTHFGGASV 156 (449)
T ss_pred CHHHHHHHHHHHHhcCCCCC------CEEEEcCchHHHHHHHHHHHHHHHHh-cCCCC-CcEEEEECCCcCCcchhhhcc
Confidence 34455667788888742111 25789999999999999999875421 12111 223444454555433222222
Q ss_pred cCCC---------CCCeEEEecCCCC--Ccc-cCHHHHHHHHHHH----H--HCCCccEEEEeecCCccccccCC----c
Q 038818 192 AGID---------PKNFRAIKTTKSS--SFT-LTPESLQAAIDLD----I--QAGLIPLFLCATVGTTAITTVDP----L 249 (486)
Q Consensus 192 ~G~g---------~~~v~~v~~d~~~--~~~-~d~~~L~~~l~~~----~--~~g~~p~~vv~~~gtt~~G~idp----l 249 (486)
.|-. ...+..++....- .+. -|++.+++.+.+. . ..+..+.+|++.-.....|.+-| +
T Consensus 157 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl 236 (449)
T PRK07481 157 NGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFW 236 (449)
T ss_pred CCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHH
Confidence 2210 1123444332100 011 2455544333211 1 12234667888777777777655 8
Q ss_pred hHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcCCcccc
Q 038818 250 GPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALSTNPEFL 328 (486)
Q Consensus 250 ~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~~~~y~ 328 (486)
++|.++|++||+.+++|+.+.|+.....-+.....++ ..|.+++ -|.++..+ +.|.++++++ .. +.+......
T Consensus 237 ~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~~-i~-~~~~~~~~~- 310 (449)
T PRK07481 237 PLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGV-KPDIMCL--AKGITSGYVPLGATMVNAR-IA-DAFEANADF- 310 (449)
T ss_pred HHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCC-CCCEEEE--eecccCCCcCceEEEEcHH-HH-HHHhccCcc-
Confidence 9999999999999999999876532211111111233 4788777 68887664 6888888764 22 233211000
Q ss_pred cCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEecCC--CeeEEE
Q 038818 329 RNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDN-RFEIVAPR--NFAVVC 405 (486)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~--~~~~v~ 405 (486)
. .. .....+.....+.+.++++.+..-.-.+..++..++.++|.+.|+++. ...++... ...++.
T Consensus 311 -~------~~-----~~h~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~g 378 (449)
T PRK07481 311 -G------GA-----IMHGYTYSGHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLA 378 (449)
T ss_pred -c------cc-----cccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEE
Confidence 0 00 000111122344444444433211112455667777777777776541 12222111 123444
Q ss_pred EEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 406 FRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 406 f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
+.+..+... .+. .........++.+.+.++|.+. .+. + ..+|++. ....|++|||+++++|+++++++
T Consensus 379 i~l~~~~~~-~~~--~~~~~~~~~~~~~~~~~~Gvl~-~~~---g-~~i~l~P-pl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 379 LDLVADKAT-REP--IDPSKGYANAVADVARENGVLV-RPS---G-TKIILSP-PLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred EEecccccc-cCC--CCchhHHHHHHHHHHHhCCeEE-Eec---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHhc
Confidence 444321100 000 0001234567788888899753 322 2 2478775 23468899999999999998765
No 356
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.39 E-value=4.1e-10 Score=113.98 Aligned_cols=315 Identities=10% Similarity=-0.018 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.+...++.+.|+++++-+.+ ..+++++||||+..|+..||...... + .+ +..+|......|-...-+...
T Consensus 85 ~~~~~~la~~L~~~~p~~~~-------~v~f~~SGsEAve~AlklAr~~~~~~-g-~~-r~kii~~~~~yHG~t~~a~s~ 154 (428)
T PRK07986 85 HPPAIELCRKLVAMTPQPLE-------CVFLADSGSVAVEVAMKMALQYWQAK-G-EP-RQRFLTLRHGYHGDTFGAMSV 154 (428)
T ss_pred CHHHHHHHHHHHhhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-C-CC-CcEEEEECCCcCCCcHhhhcc
Confidence 34455667778887642212 57999999999999999999753211 1 11 223444555555433222222
Q ss_pred cCCC----------CCCeEEEecCCCC---Cc-ccCHHHHHHHHHHHHHCCCccEEEEeecC-Ccccccc----CCchHH
Q 038818 192 AGID----------PKNFRAIKTTKSS---SF-TLTPESLQAAIDLDIQAGLIPLFLCATVG-TTAITTV----DPLGPL 252 (486)
Q Consensus 192 ~G~g----------~~~v~~v~~d~~~---~~-~~d~~~L~~~l~~~~~~g~~p~~vv~~~g-tt~~G~i----dpl~~I 252 (486)
.|-. ...+..+|..... .+ .-|+++|++.|+.. +....+|++... ....|.+ +.+++|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~---~~~iaavi~Epi~~g~gg~~~~~~~~L~~l 231 (428)
T PRK07986 155 CDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAH---RHEIAAVILEPIVQGAGGMRIYHPEWLKRV 231 (428)
T ss_pred cCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhC---CCcEEEEEEechhcCcCCcccCCHHHHHHH
Confidence 2210 0123344432100 00 23677888888632 223445666543 3444543 339999
Q ss_pred HHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCc-ccccC
Q 038818 253 CDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNP-EFLRN 330 (486)
Q Consensus 253 ~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~-~y~~~ 330 (486)
.++|++||+++++|+++.|+.....-+.....++ ..|.++ ..|.+++. .++|.++.+++ . .+.+.... ..+..
T Consensus 232 ~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv-~PDi~t--~gK~l~gG~~p~~av~~~~~-i-~~~~~~~~~~~~~~ 306 (428)
T PRK07986 232 RKLCDREGILLIADEIATGFGRTGKLFACEHAGI-APDILC--LGKALTGGTMTLSATLTTRE-V-AETISNGEAGCFMH 306 (428)
T ss_pred HHHHHHcCCEEEEeccccCCccCCCeeeecccCC-CCCEEE--echhhhCCcccCcchhchHH-H-HHHhhcCCCCcccc
Confidence 9999999999999999866422111111111233 467776 47888766 36777777654 2 22332110 00000
Q ss_pred ccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC--CeeEEEEEe
Q 038818 331 KASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR--NFAVVCFRV 408 (486)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~--~~~~v~f~~ 408 (486)
. .|+. +.+....+...+++.+-.+ +..++..++.++|++.|+++.....+... ...++.+.+
T Consensus 307 ~------------~T~~-g~p~~~aaa~a~L~~i~~~---~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~ 370 (428)
T PRK07986 307 G------------PTFM-GNPLACAVANASLSLLESG---DWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVET 370 (428)
T ss_pred C------------CCCC-cCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEe
Confidence 0 0111 1112223334444444323 35677778888888888764222212111 123444444
Q ss_pred ecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 409 LPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
..+ ....++.+.+.++|.++ .+. + ..+|++. ....|++||++++++|.++++
T Consensus 371 ~~~--------------~~~~~~~~~l~~~Gl~~-~~~---g-~~i~~~P-pl~it~~ei~~~~~~l~~~l~ 422 (428)
T PRK07986 371 TRP--------------VNMAALQRFFVEQGVWI-RPF---G-KLIYLMP-PYIILPEQLQRLTAAVNRAVQ 422 (428)
T ss_pred CCc--------------ccHHHHHHHHHHCCcEE-Eec---C-CEEEEeC-CCCCCHHHHHHHHHHHHHHHh
Confidence 321 01346777888889753 322 2 4789876 457889999999999999875
No 357
>PRK06148 hypothetical protein; Provisional
Probab=99.38 E-value=1.6e-09 Score=120.64 Aligned_cols=321 Identities=12% Similarity=0.065 Sum_probs=181.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.+.+.++.+.|++++.-+.+ ..+|+++|||||..|+..||... | ++.+|......|-...-+...
T Consensus 662 ~~~~~~lAe~L~~~~p~~~~-------~v~f~nSGsEA~e~AlklAr~~t-------G-r~~ii~~~~~YHG~t~~a~s~ 726 (1013)
T PRK06148 662 HDAIVAYAERLTATLPDGLT-------VAFFVNSGSEANSLALRLARAHT-------G-QRDAIVLDHAYHGTTTELIDL 726 (1013)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHhc-------C-CCeEEEEcCCccCCCcchhhc
Confidence 44555667778887642212 57899999999999999999752 1 223344444455332222221
Q ss_pred cC--------CC-CCCeEEEecCCC--CCcc-cC-------HHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----
Q 038818 192 AG--------ID-PKNFRAIKTTKS--SSFT-LT-------PESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---- 248 (486)
Q Consensus 192 ~G--------~g-~~~v~~v~~d~~--~~~~-~d-------~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---- 248 (486)
.| .+ ...+..++.... ..+. -| .+.++++++.....+..+..|++.......|.+-|
T Consensus 727 s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~y 806 (1013)
T PRK06148 727 SPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGY 806 (1013)
T ss_pred CchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHH
Confidence 11 11 113333332100 0011 11 24567666543333445677888777777787766
Q ss_pred chHHHHHHHHhCceEEeeccccchhccCcc-chhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCccc
Q 038818 249 LGPLCDIAKRYSIWVHVDAAYAGSACICPE-FRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEF 327 (486)
Q Consensus 249 l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~-~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y 327 (486)
++++.++|++||+.+++|+++.|+...... +.....++ ..|.+++ -|.++..++.|.++.+++ . .+.+.....+
T Consensus 807 l~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv-~PDivt~--gK~lggG~Plgav~~~~e-i-~~~~~~g~~~ 881 (1013)
T PRK06148 807 LREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGV-VPDIVTM--GKPIGNGHPMGAVVTTRE-I-ADSFDNGMEY 881 (1013)
T ss_pred HHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCC-Ccceeee--cccccCCcceEEEEEcHH-H-HhhccCCCcc
Confidence 999999999999999999998765322211 11111233 5788777 699887788999998744 2 2223210000
Q ss_pred ccCccCCCCCccCCCCccccCCCCCCchHHHHH---HHHhchHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEecCC--Ce
Q 038818 328 LRNKASDSKQVVDYKDWQITLSRRFRALKLWLV---LRSFGVANLRNFLRSHVRMAQLFQELVGGDN-RFEIVAPR--NF 401 (486)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~---l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~--~~ 401 (486)
..+-....+++.++ +..+-.+ ++.++..++.++|++.|+++. ...++... ..
T Consensus 882 -------------------~~Tf~gnpla~aaa~a~L~~i~~e---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~G 939 (1013)
T PRK06148 882 -------------------FNTFGGNPVSCAIGLAVLDIIEDE---DLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMG 939 (1013)
T ss_pred -------------------ccCCCCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeec
Confidence 01112234444444 4434333 455667777788877776531 11111111 12
Q ss_pred eEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 402 AVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 402 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
.++.+.+..+.. ......+....+.+.+.++|+++ .+... ....+|+.. ....|++|||+++++|++++.+
T Consensus 940 l~~gvel~~~~~------~~~~~~~~~~~i~~~~~~~Gvl~-~~~g~-~~~vlr~~P-pl~it~~~id~~l~~l~~~l~~ 1010 (1013)
T PRK06148 940 LFLGIELVTDRK------TKAPATAIARYVKNGARERGILI-GTEGP-HDNVLKIRP-PLIFSRADADHLLEVLDDVLAA 1010 (1013)
T ss_pred eEEEEEecCCcc------ccCccHHHHHHHHHHHHhCCeEE-eccCC-CCCEEEEeC-CccCCHHHHHHHHHHHHHHHHH
Confidence 334444432110 00111345667888888999754 33211 136799987 4678889999999999999877
Q ss_pred Hh
Q 038818 482 IL 483 (486)
Q Consensus 482 l~ 483 (486)
+.
T Consensus 1011 ~~ 1012 (1013)
T PRK06148 1011 AL 1012 (1013)
T ss_pred Hh
Confidence 64
No 358
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.38 E-value=6.6e-10 Score=109.99 Aligned_cols=282 Identities=13% Similarity=0.057 Sum_probs=158.3
Q ss_pred HHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcC-
Q 038818 115 ENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAG- 193 (486)
Q Consensus 115 e~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G- 193 (486)
..++.+.++++.|.+ ..+++++||+|+..|+.++|... | ++.+|..+...|-...-+....+
T Consensus 68 ~~~la~~l~~~~~~~---------~v~~~~SGseA~e~Alklar~~~-------g-r~~Ii~~~~syHG~t~~~ls~~~~ 130 (364)
T PRK04013 68 KEEMLEELSKWVNYE---------YVYMGNSGTEAVEAALKFARLYT-------G-RKEIIAMTNAFHGRTMGALSATWK 130 (364)
T ss_pred HHHHHHHHHhhcCCC---------EEEEeCchHHHHHHHHHHHHHHh-------C-CCEEEEECCccccCchhhccCCCC
Confidence 334445566666543 47899999999999999998752 1 13344444445544333332221
Q ss_pred ------CC--CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC-C---chHHHHHHHHhCc
Q 038818 194 ------ID--PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD-P---LGPLCDIAKRYSI 261 (486)
Q Consensus 194 ------~g--~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id-p---l~~I~~i~~~~g~ 261 (486)
.+ ...+..+|. -|++.+++.+.+. +..|++.......|.+- | +++|.++|++||+
T Consensus 131 ~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~i~~~------~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gi 197 (364)
T PRK04013 131 PKYREDFEPLVPGFKHIPF-------NDVEAAKEAITKE------TAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGA 197 (364)
T ss_pred cccccCCCCCCCCcEEecC-------CCHHHHHHHhcCC------cEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 11 012233332 1678888887532 34677776655556553 3 9999999999999
Q ss_pred eEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCC
Q 038818 262 WVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDY 341 (486)
Q Consensus 262 ~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 341 (486)
.++.|+++.|+ -...-+....-++ ..|.+++ -|.++..++.|.++.+++- . +.....
T Consensus 198 llI~DEv~tG~-RtG~~~a~~~~gv-~PDiv~~--gK~lggG~P~~a~~~~~~~--~------~~~~~~----------- 254 (364)
T PRK04013 198 LLIADEVQSGL-RTGKFLAIEHYKV-EPDIVTM--GKGIGNGVPVSLTLTNFDV--E------RGKHGS----------- 254 (364)
T ss_pred EEEEechhhcC-CCCchhHHHhcCC-CCCEEEe--cccccCCceeEEEEecccc--c------CCCcCC-----------
Confidence 99999998764 2221111111233 4777776 6888766778888876441 0 000000
Q ss_pred CCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCc
Q 038818 342 KDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKAN 421 (486)
Q Consensus 342 ~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~ 421 (486)
| ..+.+....+..+++..+-.+++.+.+++. + +.+.. +.+.-+. -..-++.+.+..+
T Consensus 255 ---T-~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~------l-~~l~~-~~v~~vR-G~Gl~~gve~~~~---------- 311 (364)
T PRK04013 255 ---T-FGGNPLACKAVAVTLRILRRERLVEKAGEK------F-IEIKG-ERVVTTR-GRGLMIGIVLKKP---------- 311 (364)
T ss_pred ---C-CCcCHHHHHHHHHHHHHHHhccHHHHHHHH------H-HHhcc-Ccceeee-eCcEEEEEEeCCc----------
Confidence 1 011112223334444445444443333321 2 22322 2211110 1123444444321
Q ss_pred cchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 422 EGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 422 ~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
...+.+.+.++|.+. .+ .+...+|+.. ....+++|++++++.|++++++++
T Consensus 312 ------~~~i~~~~~~~Gll~-~~---~g~~vlr~~P-pl~it~~~i~~~~~~l~~~l~~~~ 362 (364)
T PRK04013 312 ------VGKYVEELQNRGYLV-HT---AGQRVIRLLP-PLIISKDTMEEAKSAIEGVINDIL 362 (364)
T ss_pred ------HHHHHHHHHhCCcEE-ee---CCCCEEEEeC-CcccCHHHHHHHHHHHHHHHHHHh
Confidence 235677777889753 32 2346799987 457789999999999999998765
No 359
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.38 E-value=9.1e-10 Score=112.73 Aligned_cols=333 Identities=11% Similarity=0.042 Sum_probs=179.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
++.+.++.+.|++++...-+ ..+|+++||+||..|+..||...... |..+ ++.+|......|-...-+..+
T Consensus 98 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGseAve~AlklAr~~~~~~-g~tg-r~~ii~~~~~YHG~t~~als~ 168 (460)
T PRK06916 98 NVPSILLAEKLIEVVPEGLK-------KVFYSDSGATAVEIAIKMAFQYWQNK-GKPK-KQRFVTLKNAYHGDTIGAVSV 168 (460)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCcCCcccHHhHhc
Confidence 34556677788887642212 57999999999999999999753221 2111 233444555566544444444
Q ss_pred cCCC---------CCCeEEEecCCCC--Cc--------ccCHHHHHHHHHHHHHCCCccEEEEeec-CCccccccCC---
Q 038818 192 AGID---------PKNFRAIKTTKSS--SF--------TLTPESLQAAIDLDIQAGLIPLFLCATV-GTTAITTVDP--- 248 (486)
Q Consensus 192 ~G~g---------~~~v~~v~~d~~~--~~--------~~d~~~L~~~l~~~~~~g~~p~~vv~~~-gtt~~G~idp--- 248 (486)
.|-. ...+..+|....- .+ .-+++.+++.++. .+..+..|++.- .....|.+-|
T Consensus 169 s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAvi~EP~iqg~gG~~~~~~~ 245 (460)
T PRK06916 169 GAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKE---KHEEIAAIIVEPLVQGAGGMITMPKG 245 (460)
T ss_pred cCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcccCCHH
Confidence 3321 0123444432100 00 1235667777752 223455677765 3555576633
Q ss_pred -chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcCCcc
Q 038818 249 -LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALSTNPE 326 (486)
Q Consensus 249 -l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~~~~ 326 (486)
+++|.++|++||+.+++|+++.|+.....-+.....++ ..|.+++ -|.++..+ ++|.++.+++- . +.+.. .
T Consensus 246 fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~ei-~-~~~~~--~ 318 (460)
T PRK06916 246 YLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENV-TPDIMTA--GKGLTGGYLPIAITVTTDEI-Y-NAFYG--D 318 (460)
T ss_pred HHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCC-CCCeeee--ehhhhcCccccceeeecHHH-H-HHhhc--c
Confidence 89999999999999999999876422221111111233 4787776 68777664 78888887652 2 22211 0
Q ss_pred cccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC--CeeEE
Q 038818 327 FLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR--NFAVV 404 (486)
Q Consensus 327 y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~--~~~~v 404 (486)
+.... .. ....+....++.+.+++..+..-.-.++.++..++.++|.+.|+++....++... ...++
T Consensus 319 ~~~~~--------~~---~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~ 387 (460)
T PRK06916 319 YEEQK--------TF---FHGHSYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMV 387 (460)
T ss_pred ccccC--------cc---ccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCcee
Confidence 10000 00 0001111234444444443311111235677788888888888765222111111 12234
Q ss_pred EEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 405 CFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 405 ~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
.+.+..+.. ..++ .........++...+.++|+++ .+. + ..+|+.. ....|++|||+++++|++.++++.
T Consensus 388 giel~~~~~-~~~~--~~~~~~~~~~i~~~~~~~Gvl~-~~~---g-~~l~~~P-pl~it~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 388 GIELVKNKE-TKEP--FEWTERVGVQVCKRSRELGMLT-RPL---G-NTIVFMP-PLASTIDELDEMLRILYKAISDVT 457 (460)
T ss_pred eEEeecccc-cccC--CCchhhHHHHHHHHHHHCCeEE-Eec---C-CEEEEeC-CcccCHHHHHHHHHHHHHHHHhhc
Confidence 444432110 0000 0000123456778888899754 321 2 4688876 467788999999999999998765
No 360
>PRK06149 hypothetical protein; Provisional
Probab=99.38 E-value=5.2e-10 Score=124.49 Aligned_cols=317 Identities=9% Similarity=0.002 Sum_probs=179.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHc
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIA 192 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 192 (486)
....++.+.|++++.-+.+ ..+|+++||+||..|+..||... | ++.+|......|-...-+....
T Consensus 624 ~~~~elae~L~~~~p~~~~-------~v~f~~SGsEA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~ga~~~s 688 (972)
T PRK06149 624 AAVAEFSERLAALAPDGLD-------TVFLVNSGSEANDLAIRLAWAAS-------G-RRDVVSVLEAYHGWTVATDAVS 688 (972)
T ss_pred HHHHHHHHHHHHhCCCCcC-------EEEEeCCchHHHHHHHHHHHHhc-------C-CCeEEEEeCCCCCcChhHhhhc
Confidence 3445566777777631112 57999999999999999998752 1 3345555555663222221111
Q ss_pred C----------CCCCCeEEEecCCC--CCcc-cC-----HHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----ch
Q 038818 193 G----------IDPKNFRAIKTTKS--SSFT-LT-----PESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LG 250 (486)
Q Consensus 193 G----------~g~~~v~~v~~d~~--~~~~-~d-----~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~ 250 (486)
+ .....+..++.... ..+. .+ .+++++.++.....+..+.+|++.......|.+-| ++
T Consensus 689 ~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~ 768 (972)
T PRK06149 689 TSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQ 768 (972)
T ss_pred CCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHH
Confidence 1 00112344443210 0011 12 35666666654444556777888877777788888 99
Q ss_pred HHHHHHHHhCceEEeeccccchhccCccc-hhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCccccc
Q 038818 251 PLCDIAKRYSIWVHVDAAYAGSACICPEF-RHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLR 329 (486)
Q Consensus 251 ~I~~i~~~~g~~lhvD~a~g~~~~~~~~~-~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~ 329 (486)
+|.++|++||+.+++|+++.|+......+ .....++ ..|.+++ -|.++..++.|.++++++ . .+.+... .+++
T Consensus 769 ~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv-~PDivt~--gK~lg~G~Pl~av~~~~~-i-~~~~~~~-~~~~ 842 (972)
T PRK06149 769 QVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGV-VPDIITM--AKGMGNGHPLGAVITRRE-I-AEALEAE-GYFF 842 (972)
T ss_pred HHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCC-CCCEEEe--cccccCCeeeEEEEEcHH-H-HhhhccC-Cccc
Confidence 99999999999999999996543222111 1111234 5788866 788887677899988764 2 2233211 1111
Q ss_pred CccCCCCCccCCCCccccCCCCCCchHHHHHH---HHhchHHHHHHHHHHHHHHHHHHHHHhCC----CCeEEecCCCee
Q 038818 330 NKASDSKQVVDYKDWQITLSRRFRALKLWLVL---RSFGVANLRNFLRSHVRMAQLFQELVGGD----NRFEIVAPRNFA 402 (486)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l---~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~ 402 (486)
. | .....+.+.+++ ..+-.+ ++.++..++.++|++.|+++ |-+..+.. ...
T Consensus 843 s--------------T----~~gnP~~~aaala~L~~i~~e---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG-~Gl 900 (972)
T PRK06149 843 S--------------S----TGGSPVSCRIGMAVLDVLREE---KLQENARRVGDHLKARLEALADRHPLIGAVHG-MGL 900 (972)
T ss_pred C--------------C----CCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEee-cce
Confidence 1 1 112334444444 333333 35566777777787777653 32211111 123
Q ss_pred EEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 403 VVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 403 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
++.+.+..... ..+...+....+.+.+.++|+++ .+.. ....++|+.. ....|++|||.++++|++++.+
T Consensus 901 ~~gvel~~~~~------~~~~~~~~~~~i~~~l~~~Gvl~-~~~g-~~~~vl~~~P-pl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 901 YLGVELVRDRQ------TLEPATEETAAICDRLLELGVIM-QPTG-DHLNILKIKP-PLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred EEEEEEecCcc------cCCCChHHHHHHHHHHHhCCeEE-eecC-CCCCEEEEEC-CCcCCHHHHHHHHHHHHHHHHh
Confidence 34444432110 00011234567888888899753 3321 1135788876 3467889999999999998864
No 361
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.37 E-value=1e-09 Score=111.47 Aligned_cols=287 Identities=11% Similarity=0.047 Sum_probs=158.3
Q ss_pred ceEEcCCchHHHHHHHHHHHHHHHHH-cc-------c----------cCCCC-eEEEecCCCchHHHHHHHHcCCC----
Q 038818 139 GGVIQGTTCEAILCTLAAARDQILNE-IG-------R----------ENISR-LVVYGSDQTHSALQKAAQIAGID---- 195 (486)
Q Consensus 139 ~~~~t~ggt~a~~~al~~a~~~~~~~-~~-------~----------~~~~~-~~v~~s~~~H~s~~~a~~~~G~g---- 195 (486)
..+|++||||||..|+..||.+.... ++ . .|.++ .+|......|-...-+....|-.
T Consensus 124 ~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~ 203 (464)
T TIGR00699 124 QVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHK 203 (464)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccc
Confidence 57999999999999999998753211 00 0 11112 34445555665544444444321
Q ss_pred ----CCCeEEEecCCCC-C-----------cccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHHH
Q 038818 196 ----PKNFRAIKTTKSS-S-----------FTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCDI 255 (486)
Q Consensus 196 ----~~~v~~v~~d~~~-~-----------~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~i 255 (486)
...+..+|..... . ..-+++.|+++|++. +..+..|++.......|.+-| +++|.++
T Consensus 204 ~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~---~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~l 280 (464)
T TIGR00699 204 LDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKW---HKPVAAIIVEPIQSEGGDNHASPDFFRKLRDI 280 (464)
T ss_pred cCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHH
Confidence 0112233322100 0 011456677777532 233567788777777788887 9999999
Q ss_pred HHHhCceEEeeccccchhccCccchhhhcCCC-CCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCC
Q 038818 256 AKRYSIWVHVDAAYAGSACICPEFRHFIDGIE-GADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASD 334 (486)
Q Consensus 256 ~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~-~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~ 334 (486)
|++||+.|++|+++.|+.....-+.....++. ..|.+++ .|.+++ .|+++.+ + .+.....+..
T Consensus 281 c~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~--gK~lg~---gG~~~~~-~-----~~~~~~~~~~----- 344 (464)
T TIGR00699 281 TKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTF--SKKFQT---AGYFFHD-P-----AFRPNKPYRQ----- 344 (464)
T ss_pred HHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEe--hhhhcc---CCccccc-h-----hccCCCCccc-----
Confidence 99999999999998765321111111122443 5888776 577631 2332222 1 1110000000
Q ss_pred CCCccCCCCccccCCCCCCchHHHH---HHHHhchHHHHHHHHHHHHHHHHHHHHHhC----CCC-eEEec-CCCeeEEE
Q 038818 335 SKQVVDYKDWQITLSRRFRALKLWL---VLRSFGVANLRNFLRSHVRMAQLFQELVGG----DNR-FEIVA-PRNFAVVC 405 (486)
Q Consensus 335 ~~~~~~~~~~~~~~sr~~~~l~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~-~~~~~-~~~~~~v~ 405 (486)
..+-...++++.+ ++..+-.+ +..++..++.++|++.|++ +|. +.-+. .....++.
T Consensus 345 ------------~~T~~gnp~~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~g 409 (464)
T TIGR00699 345 ------------FNTWMGDPSRALILREIIQEIKRK---DLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIA 409 (464)
T ss_pred ------------ccCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEE
Confidence 0011123333333 34444323 3455666666777777654 331 22121 13455666
Q ss_pred EEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 406 FRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 406 f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
+.+.. .....++.+.+.++|.+. ... +...+|+.. ....+++|||.++++|.++
T Consensus 410 ie~~~--------------~~~~~~i~~~~~~~Gvl~-~~~---g~~~ir~~P-pl~it~~eid~~~~~l~~~ 463 (464)
T TIGR00699 410 WDTPD--------------EAKRDKLLKKARNNGVNI-GGC---GVKAIRLRP-MLVFQKHHADIFLEIISKI 463 (464)
T ss_pred EecCC--------------HHHHHHHHHHHHHCCcEE-ecC---CCCeEEEeC-CCCCCHHHHHHHHHHHHHh
Confidence 65532 233567888888899754 322 446799987 4678889999999999875
No 362
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.37 E-value=2e-09 Score=101.78 Aligned_cols=156 Identities=12% Similarity=0.080 Sum_probs=124.9
Q ss_pred hcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEE
Q 038818 97 GFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVY 176 (486)
Q Consensus 97 ~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~ 176 (486)
......+.|+.|.+..-+.+.+.+++.+.=|.|.+ ..++++|+|+|.|....|...... +++=|+
T Consensus 101 ~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~-----p~dI~LT~GAS~ai~~il~l~~~~----------~~~Gvl 165 (475)
T KOG0258|consen 101 DCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPAD-----PEDIFLTTGASPAIRSILSLLIAG----------KKTGVL 165 (475)
T ss_pred hcCCcccccccccCChhHHHHHHHHHHhccCCCCC-----HHHeeecCCCcHHHHHHHHHHhcC----------CCCceE
Confidence 33336678999999999999999999999886544 247999999999987777766543 344455
Q ss_pred ecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc---CCchHHH
Q 038818 177 GSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV---DPLGPLC 253 (486)
Q Consensus 177 ~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i---dpl~~I~ 253 (486)
++-.-++-....+..+|. ..+..-.|+..+|.+|.++|++.+++.. ++..|.++++..+.|+||.+ +.+++|.
T Consensus 166 iPiPQYPLYsAti~l~~~---~~v~YyLdEe~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~e~ie~i~ 241 (475)
T KOG0258|consen 166 IPIPQYPLYSATISLLGG---TQVPYYLDEESNWSLDVAELERSVDEAR-KGINPRALVVINPGNPTGQVLSEENIEGII 241 (475)
T ss_pred eecCCCchhHHHHHHhCC---cccceeeccccCCCCCHHHHHHHHHHHh-ccCCceEEEEECCCCccchhhcHHHHHHHH
Confidence 554444444455677777 6677778887889999999999999988 78889888999999999987 6799999
Q ss_pred HHHHHhCceEEeeccccc
Q 038818 254 DIAKRYSIWVHVDAAYAG 271 (486)
Q Consensus 254 ~i~~~~g~~lhvD~a~g~ 271 (486)
.+|+++|+.|..|..|--
T Consensus 242 ~fa~~~~l~llaDEVYQ~ 259 (475)
T KOG0258|consen 242 CFAAEEGLVLLADEVYQD 259 (475)
T ss_pred HHHHHcCeEEechHHHHh
Confidence 999999999999998743
No 363
>PRK07046 aminotransferase; Validated
Probab=99.37 E-value=6.8e-10 Score=113.27 Aligned_cols=311 Identities=16% Similarity=0.088 Sum_probs=171.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
++.+.++.+.++++++++ ...|+++||||+..|+..||... | +..+|......|-..+.....
T Consensus 114 ~~~~~~lAe~l~~~~~~~---------~v~F~nSGtEA~e~AlrlAR~~T-------G-r~~ii~~~g~YHG~~d~~l~~ 176 (453)
T PRK07046 114 SEDAAWVGEELARRFGLP---------YWQVATTATDANRFVLRWARAVT-------G-RPKILVFNGCYHGTVDDVFVD 176 (453)
T ss_pred CHHHHHHHHHHHHHhCCC---------EEEEECCHHHHHHHHHHHHHHhh-------C-CCEEEEECCCCCCCcHHhHhh
Confidence 566777888898888532 57999999999999999999863 1 223333444455432222111
Q ss_pred c------------CCCC---CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHH
Q 038818 192 A------------GIDP---KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPL 252 (486)
Q Consensus 192 ~------------G~g~---~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I 252 (486)
. |+.. ..+..+|. -|++.|++.+.. ....+|++.-.....|.+-| ++++
T Consensus 177 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------nd~~~l~~~l~~-----~~vAavi~EPi~g~~G~~~p~~~fl~~l 244 (453)
T PRK07046 177 LVDGRPVQRPGLLGQVHDLTATTRVVEF-------NDLAALEAALAD-----GDVAAVLAEPAMTNIGMVLPEPGFHEAL 244 (453)
T ss_pred ccCCCCCCCCCCCCCCccccCceEeeCC-------CCHHHHHHHhCC-----CCeEEEEECCCCCCCCCcCCCHHHHHHH
Confidence 1 1100 01222221 278999988842 22456777766666677755 7999
Q ss_pred HHHHHHhCceEEeecccc---chhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCC-cccc
Q 038818 253 CDIAKRYSIWVHVDAAYA---GSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTN-PEFL 328 (486)
Q Consensus 253 ~~i~~~~g~~lhvD~a~g---~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~-~~y~ 328 (486)
.++|++||+.+++|+++. |... ... .-++ ..|.+++ -|.+++.+++|.+..+++ .. +.+... ....
T Consensus 245 r~lc~~~g~llI~DEV~tfr~g~Gg----~~~-~~gv-~PDi~t~--gK~lggG~Pi~av~g~~~-i~-~~~~~~~~~~~ 314 (453)
T PRK07046 245 RELTRRYGTLLVIDETHTISSGPGG----YTR-AHGL-EPDFLVV--GKPIAGGVPCAVYGFSAE-LA-ERAQAAKASAP 314 (453)
T ss_pred HHHHHHhCCEEEEEccccCccCCcc----hhH-HhCC-Cccceee--hhhhcCCCcceeeeehHH-HH-HHHhhccccCC
Confidence 999999999999999984 2111 111 1134 4788775 799887788998888755 22 222210 0000
Q ss_pred cCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhC----CCC-eEEecCCCeeE
Q 038818 329 RNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGG----DNR-FEIVAPRNFAV 403 (486)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~-~~~~~~~~~~~ 403 (486)
. .......+-....+.+.+++..+..-.-++..++..++.++|++.|++ .+- ..+.+.. .+
T Consensus 315 ~------------~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G--~~ 380 (453)
T PRK07046 315 P------------GHSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVG--AR 380 (453)
T ss_pred C------------CCceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC--cE
Confidence 0 000111122234444444444331111123455666667777666653 321 2222222 23
Q ss_pred EEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 404 VCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 404 v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
+.+.+.+...+................+...+.++|+++ .+. ...++++. ..+++|||+++++++++++++.
T Consensus 381 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~-~~~----~~~~~~~p---~~t~~did~~~~~~~~~l~~~~ 452 (453)
T PRK07046 381 VEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLI-TPF----HNMMLVCP---ATTAADVDRLVAAFDACLGELL 452 (453)
T ss_pred EEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEE-ecc----cCcEEEeC---CCCHHHHHHHHHHHHHHHHHHh
Confidence 444443211000000000001234566777888899753 321 13456654 4688899999999999998875
No 364
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.36 E-value=2.9e-09 Score=109.00 Aligned_cols=327 Identities=14% Similarity=0.060 Sum_probs=176.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
+..+.++.+.|.+++...... ....+++++||||+..|+..||... | +..+|......|-...-+...
T Consensus 100 ~~~~~~lAe~L~~~~p~~~~~----~~~~f~~~SGsEAve~AlklAr~~t-------g-r~~Ii~~~~~yHG~t~~als~ 167 (459)
T PRK06931 100 TPLKDAFSEYLLSLLPGQGKE----YCLQFTGPSGADAVEAAIKLAKTYT-------G-RSNVISFSGGYHGMTHGALAV 167 (459)
T ss_pred CHHHHHHHHHHHHhCCCcccc----ceEEEeCCCcHHHHHHHHHHHHHhc-------C-CCeEEEECCCcCCccHHHHhh
Confidence 455666778888877422110 0023556899999999999999752 1 223333444455443333333
Q ss_pred cCCC---------CCCeEEEecCCCCCc------ccCHHHHHHHHHHHHH----CCCccEEEEeecCCccccccCC----
Q 038818 192 AGID---------PKNFRAIKTTKSSSF------TLTPESLQAAIDLDIQ----AGLIPLFLCATVGTTAITTVDP---- 248 (486)
Q Consensus 192 ~G~g---------~~~v~~v~~d~~~~~------~~d~~~L~~~l~~~~~----~g~~p~~vv~~~gtt~~G~idp---- 248 (486)
.|-. ...+..+|....-.. .-+.+++++.+++... .+..+..|++.-.....|.+-|
T Consensus 168 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~y 247 (459)
T PRK06931 168 TGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEW 247 (459)
T ss_pred cCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHH
Confidence 3210 113445554310000 1134555444443322 1233566777666666676644
Q ss_pred chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccc
Q 038818 249 LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFL 328 (486)
Q Consensus 249 l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~ 328 (486)
++++.++|++||+.+++|+.+.|+.....-+.....++ ..|.+++ -|.++..++.|.+..++. + +.+. +...
T Consensus 248 l~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv-~PDivt~--gK~l~gG~Pi~av~~~~~--~-~~~~--~~~~ 319 (459)
T PRK06931 248 LQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGI-EPDIIVM--SKAVGGGLPLAVLGIKKE--F-DAWQ--PGGH 319 (459)
T ss_pred HHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCC-CCCEEEe--cccccCCcceeeeeeHHH--H-hhcc--CCCC
Confidence 89999999999999999999877532221111111233 5788877 688887688888777643 2 2221 1100
Q ss_pred cCccCCCCCccCCCCccccCCCCCCchHHHHHH---HHhchHHHHHHHHHHHHHHHHHHHHHhC----CCCeEEecCCCe
Q 038818 329 RNKASDSKQVVDYKDWQITLSRRFRALKLWLVL---RSFGVANLRNFLRSHVRMAQLFQELVGG----DNRFEIVAPRNF 401 (486)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l---~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~ 401 (486)
..+-...++++.+++ ..+..+ +..++..++.++|.+.|++ +|.+.-+ .-..
T Consensus 320 ------------------~~T~~gnpla~aaala~L~~l~~~---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~v-rG~G 377 (459)
T PRK06931 320 ------------------TGTFRGNQLAMATGLTTLKILKEE---NLAQNAAERGEWLKAQLAELQKRYPCIGNV-RGRG 377 (459)
T ss_pred ------------------CCCCCCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhCCCeEeE-ecCc
Confidence 011122344444444 333333 3456666666777666654 3321111 1123
Q ss_pred eEEEEEeecCCC-CCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 402 AVVCFRVLPSAS-GLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 402 ~~v~f~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
.++.+.+..... +..... .........++...+.++|.++ .+.. .....+|+.. ....|++|||++++++++++.
T Consensus 378 lm~giel~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Gvl~-~~~~-~~~~~l~~~P-pl~it~~eid~~~~~l~~~l~ 453 (459)
T PRK06931 378 LMIGIEIVDERQPADAMGS-YPADGELAAAIQKACFENGLLL-ERGG-RNGNVVRLLP-PLLITQAECEEFIDRFEQALL 453 (459)
T ss_pred eEEEEEEccCccccccccc-CCccHHHHHHHHHHHHHCCcEE-eecC-CCCCEEEEEC-CCCcCHHHHHHHHHHHHHHHH
Confidence 345555532210 000000 0001234567788888899754 3221 1235799887 467789999999999999998
Q ss_pred HHhh
Q 038818 481 GILA 484 (486)
Q Consensus 481 ~l~~ 484 (486)
++++
T Consensus 454 ~~~~ 457 (459)
T PRK06931 454 AAVK 457 (459)
T ss_pred HHHh
Confidence 8764
No 365
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.36 E-value=6.1e-10 Score=104.28 Aligned_cols=329 Identities=12% Similarity=0.074 Sum_probs=195.6
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEE-cCCchHHHHHHHHHHHHHHHHHccccCCCCeEEE---ecCCCc
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVI-QGTTCEAILCTLAAARDQILNEIGRENISRLVVY---GSDQTH 182 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~-t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~---~s~~~H 182 (486)
......++|.-+.+.--+.||++++- ++..+ .-+||-||+....+... |..+|. .+.-.|
T Consensus 80 Gne~ID~iE~LCq~RALeaF~ldp~k-----WGVNVQp~SGSPANfavYtall~-----------Ph~RiMGLDLP~GGH 143 (477)
T KOG2467|consen 80 GNEYIDQIELLCQKRALEAFGLDPEK-----WGVNVQPYSGSPANFAVYTALLK-----------PHERIMGLDLPSGGH 143 (477)
T ss_pred cchHHHHHHHHHHHHHHHHhCCCHHH-----CceeeccCCCCchhhHHHhhhcC-----------CCCeeeeccCCCCCc
Confidence 34456789998889999999998752 13333 45788899765554433 333343 233445
Q ss_pred hHHHH---HHHHcCCCC-CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHH
Q 038818 183 SALQK---AAQIAGIDP-KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKR 258 (486)
Q Consensus 183 ~s~~~---a~~~~G~g~-~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~ 258 (486)
-|..- .-++..... -+-....+|+ .+|-+|.|.||+.-..- +|.++| +|++..-..-|.+.+.+||.+
T Consensus 144 LsHGy~T~~kkISa~SiyFeSmPYkv~~-~TG~IDYD~Le~~A~~f-----rPk~ii--aG~SaY~R~~DYaR~R~Iad~ 215 (477)
T KOG2467|consen 144 LSHGYQTPTKKISATSIYFESMPYKVDP-STGYIDYDKLEKTATLF-----RPKLII--AGTSAYSRLIDYARFRKIADK 215 (477)
T ss_pred cccccccCCceeeeeeeecccCceeeCC-CCCceehHHHHHHHHhc-----CCcEEE--eccccchhhccHHHHHHHHHh
Confidence 44211 001111100 0111234554 36899999999865443 465544 355556677889999999999
Q ss_pred hCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHh-cCCcccccCccCCCCC
Q 038818 259 YSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKAL-STNPEFLRNKASDSKQ 337 (486)
Q Consensus 259 ~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~-~~~~~y~~~~~~~~~~ 337 (486)
.|++|.+|-||-.+.........- .+.+|.++...||.+-+|.| |++++|+.-...+.- ...-.| +...
T Consensus 216 ~gA~Lm~DMAHISgLVAA~vipsP---Fey~DiVTTTTHKsLRGPRg-~mIFyRkGvk~~~~k~g~~i~y------dlE~ 285 (477)
T KOG2467|consen 216 VGAYLMADMAHISGLVAAGVIPSP---FEYCDIVTTTTHKSLRGPRG-AMIFYRKGVKSIKPKQGKEILY------DLED 285 (477)
T ss_pred cCceeehhhhhHHHHHhcccCCCc---ccccceeeccccccccCCcc-eeEEEeccCCcCCCCCCCccee------chhh
Confidence 999999999985554332221111 35899999999999999985 556665431100000 000011 1112
Q ss_pred ccCCC-CccccCCCCCC-chHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC-CCeeEEEEEeecCCCC
Q 038818 338 VVDYK-DWQITLSRRFR-ALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP-RNFAVVCFRVLPSASG 414 (486)
Q Consensus 338 ~~~~~-~~~~~~sr~~~-~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~ 414 (486)
..++. -.++|++-.-. ..++..+|+......+.+..++..++++.|.+.|.+. |++++.. .+.+++.+.+.+.+.
T Consensus 286 kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTDnHlvLvDLr~~G~- 363 (477)
T KOG2467|consen 286 KINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISR-GYKLVTGGTDNHLVLVDLRPKGV- 363 (477)
T ss_pred hhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCccceEEEEeccccCC-
Confidence 22221 12445554433 3566778888888889999999999999999999987 8998764 455777777776542
Q ss_pred CCCCCCccchHHHHHHHHHHHHh--cCcEEEeeeeECCEeEEEEEe---cCCCCcHHHHHHHHHHHHHHHH
Q 038818 415 LGDGKANEGANELNRKLLESINA--SGQLYVSHGMVAGIYFIRFAV---GATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 415 ~~~~~~~~~~~~~~~~l~~~l~~--~g~~~~~~~~~~~~~~lR~~~---~~~~tt~~did~~i~~l~~~~~ 480 (486)
+ +...+++++.+.- +...+.+....-..+.+|+.. +.....|+|.+++.+-|.+.++
T Consensus 364 --d-------GarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 364 --D-------GARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred --c-------hHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 1 3334555554311 111111111111234578764 3445567899999988887654
No 366
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.34 E-value=3.5e-09 Score=108.60 Aligned_cols=320 Identities=13% Similarity=0.029 Sum_probs=170.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
...+.++.+.|.+++.-... ...+|+++||||+..|+..||... + +..+|......|-...-+...
T Consensus 96 ~~~~~~la~~L~~~~p~~~~------~~v~f~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~ls~ 161 (451)
T PRK06918 96 YEPYIELAEKLAALAPGSFD------KKVLFLNSGAEAVENAVKIARKYT-------K-RQGIISFSRGFHGRTLMTMTM 161 (451)
T ss_pred cHHHHHHHHHHHHhCCCCCC------CEEEEcCCcHHHHHHHHHHHHHHh-------C-CCcEEEECCCcCccchhhhhh
Confidence 34556677788888742210 157999999999999999998762 1 223444444455443333333
Q ss_pred cCC--------C--CCCeEEEecCCC--CCcccC--------HHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---
Q 038818 192 AGI--------D--PKNFRAIKTTKS--SSFTLT--------PESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP--- 248 (486)
Q Consensus 192 ~G~--------g--~~~v~~v~~d~~--~~~~~d--------~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp--- 248 (486)
.|- + ...+..+|.... ....+. .+.+++.+.... .+..+.+|++.-.....|.+-|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavi~EPi~g~gG~~~~~~~ 240 (451)
T PRK06918 162 TSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEV-APETIAAVVMEPVQGEGGFIVPSKK 240 (451)
T ss_pred cCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhc-CCCceEEEEECcccCCCCCccCCHH
Confidence 221 0 112344443210 000111 223444332111 2234556666655555566433
Q ss_pred -chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCccc
Q 038818 249 -LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEF 327 (486)
Q Consensus 249 -l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y 327 (486)
+++|.++|++||++++.|+.+.++......+....-++ ..|.+ +..|.++..+.+|.++.+++ .. +.+.. .
T Consensus 241 ~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v-~pDi~--t~sK~l~~G~pig~v~~~~~-i~-~~~~~---~ 312 (451)
T PRK06918 241 FVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDV-VPDLI--TVSKSLGAGVPISGVIGRKE-IM-DESAP---G 312 (451)
T ss_pred HHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCC-CCCEE--eeehhhcCCCccEEEEEcHH-HH-hccCC---C
Confidence 88999999999999999999977543221111000122 35644 46899987788999887643 22 22210 0
Q ss_pred ccCccCCCCCccCCCCccccCCCCCCchHHHH---HHHHhchHHHHHHHHHHHHHHHHHHHHHhC----CCCeEEecCCC
Q 038818 328 LRNKASDSKQVVDYKDWQITLSRRFRALKLWL---VLRSFGVANLRNFLRSHVRMAQLFQELVGG----DNRFEIVAPRN 400 (486)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~ 400 (486)
.. ..+-....+.+.+ ++..+..+. ..++..++.+++.+.|++ .+.+.-+. ..
T Consensus 313 ~~-----------------~~T~~g~~l~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~l~~l~~~~~~~~~vr-g~ 371 (451)
T PRK06918 313 EL-----------------GGTYAGSPLGCAAALAVLDIIEKEN---LNDRAIELGKVVMNRFEEMKNKYNCIGDVR-GL 371 (451)
T ss_pred Cc-----------------CcCCCcCHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHhhCCCceeec-cc
Confidence 00 0011123344444 344332233 334445555666665544 33222222 23
Q ss_pred eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 401 FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 401 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
..++.+.+..+.. ..........++.+.+.++|+++.....+ ..++|+++. ...++++||++++.|+++++
T Consensus 372 G~~~~~~~~~~~~------~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~--~~~lrl~p~-l~~t~~~id~~l~~l~~~l~ 442 (451)
T PRK06918 372 GAMCAFELVQDRK------TKEPDKTLTANICKEANKRGLLLLSAGTY--GNVIRVLMP-LVITDEQLEEGLTIIEESLQ 442 (451)
T ss_pred eeEEEEEEccCCC------cCCCcHHHHHHHHHHHHHCCeEEeecCCC--CCEEEEECC-CccCHHHHHHHHHHHHHHHH
Confidence 4455554431100 00001345567888888899865433222 257999873 34678899999999999998
Q ss_pred HHhh
Q 038818 481 GILA 484 (486)
Q Consensus 481 ~l~~ 484 (486)
++..
T Consensus 443 ~~~~ 446 (451)
T PRK06918 443 ACYE 446 (451)
T ss_pred HHHH
Confidence 7753
No 367
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.34 E-value=2.7e-09 Score=108.78 Aligned_cols=313 Identities=12% Similarity=0.062 Sum_probs=166.3
Q ss_pred HHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCC----CCeEEEecCCCchHHHHHH
Q 038818 114 LENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENI----SRLVVYGSDQTHSALQKAA 189 (486)
Q Consensus 114 le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~----~~~~v~~s~~~H~s~~~a~ 189 (486)
...++.+.++++.+ +... ...+|++||||||..|+..||.+........|. +..+|......|-...-+.
T Consensus 93 ~~~~la~~l~~~~~-p~~~-----~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~al 166 (443)
T PRK08297 93 EMARFVDTFARVLG-DPEL-----PHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTL 166 (443)
T ss_pred HHHHHHHHHHhhcC-CCCC-----CEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhh
Confidence 33445566666653 2211 268999999999999999998763211000111 2334445555564433344
Q ss_pred HHcCCCCC--------CeEEEecCC------CCC-------cccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc--
Q 038818 190 QIAGIDPK--------NFRAIKTTK------SSS-------FTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV-- 246 (486)
Q Consensus 190 ~~~G~g~~--------~v~~v~~d~------~~~-------~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i-- 246 (486)
...|.... ....+|... ..+ ..-+++++++.+.. .+..+..|++.-.....|.+
T Consensus 167 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~iAavI~EPi~g~~G~~~p 243 (443)
T PRK08297 167 SLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFER---HPHDIACFIAEPIQGEGGDNHF 243 (443)
T ss_pred hhcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEccccCCCCCcCC
Confidence 33331000 000111110 000 00134555666653 23446778887766667776
Q ss_pred --CCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCch-HHH-HHhc
Q 038818 247 --DPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPN-ALI-KALS 322 (486)
Q Consensus 247 --dpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~-~~~-~~~~ 322 (486)
+.+++|.++|++||+++++|+++.|+.....-+.....++ ..|.+++ .|.+ | .|.++++++- ... ..+.
T Consensus 244 p~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l--~--~~a~l~~~~i~~~~~~~~~ 316 (443)
T PRK08297 244 RPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGV-RPDIVAF--GKKT--Q--VCGIMAGRRVDEVEDNVFA 316 (443)
T ss_pred CHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCC-CCCEEEe--cccc--c--ccceecchHHHHhhhhhcc
Confidence 4599999999999999999999976532111111111133 5788875 6765 3 3444444331 110 0110
Q ss_pred CCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhC----CCCe--EEe
Q 038818 323 TNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGG----DNRF--EIV 396 (486)
Q Consensus 323 ~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~--~~~ 396 (486)
. ..+. ..+-....+.+.+++..+..-.-.+..++..++.++|.+.|++ .|.+ .+-
T Consensus 317 ~-~~~~------------------~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vr 377 (443)
T PRK08297 317 V-SSRI------------------NSTWGGNLVDMVRARRILEVIEEDGLVENAARQGEYLLARLEELAAEFPAVVSNVR 377 (443)
T ss_pred C-cccc------------------CCCCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeee
Confidence 0 0000 0111123344434443332111124566677777777777754 3322 222
Q ss_pred cCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 397 APRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 397 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
....++.+.+.. ......+.+.+.++|+++. +. +...+|++. ....|++|||++++.|.
T Consensus 378 --g~G~~~~i~~~~--------------~~~~~~~~~~l~~~Gvl~~-~~---~~~~lr~~P-~l~~t~~eid~~l~~l~ 436 (443)
T PRK08297 378 --GRGLMCAFDLPT--------------TADRDEVIRRLWEEGVLVL-PC---GERSIRFRP-ALTVTTEEIDAAIDALR 436 (443)
T ss_pred --ccceEEEEEecC--------------HHHHHHHHHHHHHCCEEEe-cC---CCCeEEEEC-CccCCHHHHHHHHHHHH
Confidence 234566666642 2334567788888897543 21 235689976 35678889999999999
Q ss_pred HHHHHH
Q 038818 477 EKLDGI 482 (486)
Q Consensus 477 ~~~~~l 482 (486)
++++++
T Consensus 437 ~~l~~~ 442 (443)
T PRK08297 437 RALPEV 442 (443)
T ss_pred HHHHhh
Confidence 988765
No 368
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.34 E-value=1.6e-09 Score=109.64 Aligned_cols=309 Identities=9% Similarity=-0.010 Sum_probs=163.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHc
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIA 192 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 192 (486)
....++.+.|+++.+.+-+ ..+|+++||+|+..|+..||...... +..+ +..+|......|-...-+....
T Consensus 83 ~~~~~lae~L~~~~p~~~~-------~v~f~~SGseA~e~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~~als~~ 153 (422)
T PRK05630 83 EPAIKLTRKLLNLTDNGLD-------HVFYSDSGSVSVEVAIKMALQYSKGQ-GHPE-RTRLLTWRSGYHGDTFAAMSVC 153 (422)
T ss_pred HHHHHHHHHHHhhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCccHHHhccC
Confidence 3445566777777642212 57999999999999999999764221 2111 2234445555564333333332
Q ss_pred CC--------C--CCCeEEEecCCCCCcccC-------HHHHHHHHHHHHHCCCccEEEEeecC-Ccccccc----CCch
Q 038818 193 GI--------D--PKNFRAIKTTKSSSFTLT-------PESLQAAIDLDIQAGLIPLFLCATVG-TTAITTV----DPLG 250 (486)
Q Consensus 193 G~--------g--~~~v~~v~~d~~~~~~~d-------~~~L~~~l~~~~~~g~~p~~vv~~~g-tt~~G~i----dpl~ 250 (486)
+- + ...+..+|.... ...+ .+.+++.+.+ ....|++.-. ....|.+ +.++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~------~iAAvi~EPi~qg~gG~~~~~~~~l~ 225 (422)
T PRK05630 154 DPEGGMHSLWKGTLPEQIFAPAPPV--RGSSPQEISEYLRSLELLIDE------TVAAIIIEPIVQGAGGMRFHDVALIE 225 (422)
T ss_pred CCcccccccccccCCCCeEcCCCcc--cCCChHHHHHHHHHHHHHHhh------ceEEEEEechhcCcCCcccCCHHHHH
Confidence 21 0 012344443310 0112 2334444432 2345666542 4444554 4589
Q ss_pred HHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcCC-c--c
Q 038818 251 PLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALSTN-P--E 326 (486)
Q Consensus 251 ~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~~-~--~ 326 (486)
+|.++|++||+.+++|+++.|+.....-+.....++ ..|.+++ -|.+++.+ +.|.++++++- .+.+... . .
T Consensus 226 ~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDi~t~--gK~l~gG~~p~~av~~~~~i--~~~~~~~~~~~~ 300 (422)
T PRK05630 226 GVRTLCDKHDILLIADEIATGFGRTGELFATLAAGV-TPDIMCV--GKALTGGFMSFAATLCTDKV--AQLISTPNGGGA 300 (422)
T ss_pred HHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCC-CCCeeee--echhhcCccccceeeccHHH--HHHHhccCCCCc
Confidence 999999999999999999866422111111111133 4677755 79886543 56777776542 2233210 0 0
Q ss_pred cccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC--CCeeEE
Q 038818 327 FLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP--RNFAVV 404 (486)
Q Consensus 327 y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v 404 (486)
+... .|+ .+.+....+...+++.+-.+ +..++..++.++|++.|+++.....+.+ -...++
T Consensus 301 ~~h~-------------~T~-~g~Pla~aaa~aaL~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~ 363 (422)
T PRK05630 301 LMHG-------------PTF-MANPLACAVAHASLEIIETG---MWRKQVKRIEAELIAGLSPLAHLPGVADVRVLGAIG 363 (422)
T ss_pred cccC-------------CCC-cCCHHHHHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccccEE
Confidence 0000 011 01111222333344444333 3456777778888877764321111111 123455
Q ss_pred EEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 405 CFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 405 ~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
.+.+..+. ...++.+.+.++|.++ .+. + ..+|+.. ....|++|||++++.|+++++
T Consensus 364 ~ie~~~~~--------------~~~~~~~~~~~~Gl~~-~~~---g-~~l~~~P-pL~it~~~i~~~~~~l~~al~ 419 (422)
T PRK05630 364 VVEMEQPV--------------DMEEATQAAVDHGVWL-RPF---G-RLVYVMP-PYITTSEQIAQICAALAAAVK 419 (422)
T ss_pred EEEECCcc--------------cHHHHHHHHHHCCeEE-Eec---C-CEEEEEC-CccCCHHHHHHHHHHHHHHHh
Confidence 55554221 1246677788889753 321 2 5789876 467889999999999998875
No 369
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.34 E-value=1e-10 Score=110.43 Aligned_cols=306 Identities=11% Similarity=0.086 Sum_probs=186.7
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDP 196 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~ 196 (486)
.+.+.+++.+|.+++ ++.+-|-.++..++-+... .+++|++.+..+..+.++.+..--
T Consensus 143 dlE~~iakF~G~E~a---------ivYs~gF~ti~S~ipafsK-----------rGDIi~~de~~nfaIq~GlqlSRS-- 200 (467)
T KOG1358|consen 143 DLEKRIAKFMGTEDA---------IVYSYGFSTIESAIPAFSK-----------RGDIIFVDEAVNFAIQKGLQLSRS-- 200 (467)
T ss_pred ccHHHHHHhhCCcce---------eeeccccchhhhcchhhhc-----------cCcEEEEehhhhHHHHHHHhhhhh--
Confidence 334568999998865 3444333333333333222 688999999999999999877655
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHH----HCCC---ccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccc
Q 038818 197 KNFRAIKTTKSSSFTLTPESLQAAIDLDI----QAGL---IPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 197 ~~v~~v~~d~~~~~~~d~~~L~~~l~~~~----~~g~---~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
.++++. +.|+++||+.+.+.+ ++.. .-.++++..-.-++|.+.|+.+|.++..||...+++|..+
T Consensus 201 -~i~~Fk-------hndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~ 272 (467)
T KOG1358|consen 201 -TISYFK-------HNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESL 272 (467)
T ss_pred -eeEEec-------CCCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEeccc
Confidence 777775 448889988875543 1111 1347888888999999999999999999999999999998
Q ss_pred cchhccCccchh----hhcCCCCCCceeeccccccCCCCcceEEEeeCchHH-HHHhcCCcccccCccCCCCCccCCCCc
Q 038818 270 AGSACICPEFRH----FIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNAL-IKALSTNPEFLRNKASDSKQVVDYKDW 344 (486)
Q Consensus 270 g~~~~~~~~~~~----~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~-~~~~~~~~~y~~~~~~~~~~~~~~~~~ 344 (486)
..+.+..- .+. .-..+..+|.++.+.--.+.. .|.+.+.+.-.. .+.+ ...+|.+....
T Consensus 273 SfG~lg~~-GrGvteH~~v~~~~iDiv~~sm~~alas---~GgFc~G~~~i~~hQrL-Sg~~Y~fSAsl----------- 336 (467)
T KOG1358|consen 273 SFGVLGKT-GRGVTEHFGVPITDIDIVTASMETALAS---GGGFCAGKSFIADHQRL-SGSGYCFSASL----------- 336 (467)
T ss_pred cccccccc-CccccccCCCCccceeeeeecccccccc---cCceeecceeeEeeeec-cccceeeeccC-----------
Confidence 66554321 111 111245788888876544432 233333221110 0000 01123322100
Q ss_pred cccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccch
Q 038818 345 QITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGA 424 (486)
Q Consensus 345 ~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~ 424 (486)
-+..+-++..++..+ +.-.++.+........+.+.|+...++++.+.+.++++-.++.+.... .++-
T Consensus 337 -----Pp~la~aa~~ai~i~--~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~~~~s------~e~e 403 (467)
T KOG1358|consen 337 -----PPYLAGAAIKAILIE--EWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLERSYGS------REKE 403 (467)
T ss_pred -----chhhhhhHHHHHHHH--hhCcchhhhhhccccccchhhhcCCceEEecCcCCceeeeeecccccc------hHHH
Confidence 001112222233322 233345566667777888888888789999999999998888764311 1111
Q ss_pred HHHHHHHHHHHHhcCcEEEeeeeEC------CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 425 NELNRKLLESINASGQLYVSHGMVA------GIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 425 ~~~~~~l~~~l~~~g~~~~~~~~~~------~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
-.+-+.+.++....+........+. -...+|+|+ +...++++|+++.+.|++....+
T Consensus 404 ~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~-~a~~seeel~ra~~~ik~~~~~~ 466 (467)
T KOG1358|consen 404 EKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICV-SAGMSEEELERAAELIKEVASAV 466 (467)
T ss_pred HHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEE-eCCCCHHHHHHHHHHHHHHHHhh
Confidence 2344556666665666433322221 145799999 46778889999999999987654
No 370
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.27 E-value=9.9e-09 Score=104.48 Aligned_cols=291 Identities=11% Similarity=0.004 Sum_probs=148.6
Q ss_pred ceEEcCCchHHHHHHHHHHHHHHHHHccccCC----CCeEEEecCCCchHHHHHHHHcCCC-CCC----e---EEE----
Q 038818 139 GGVIQGTTCEAILCTLAAARDQILNEIGRENI----SRLVVYGSDQTHSALQKAAQIAGID-PKN----F---RAI---- 202 (486)
Q Consensus 139 ~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~----~~~~v~~s~~~H~s~~~a~~~~G~g-~~~----v---~~v---- 202 (486)
..+|+++|||||..|+..||....+.....|. +..+|......|-...-+....|.. ... . ..+
T Consensus 105 ~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~ 184 (431)
T TIGR03251 105 HLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPK 184 (431)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCc
Confidence 57899999999999999998753110000111 1234445555564444344333321 000 0 001
Q ss_pred ---ecCCCC-C-----cccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc----CCchHHHHHHHHhCceEEeeccc
Q 038818 203 ---KTTKSS-S-----FTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV----DPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 203 ---~~d~~~-~-----~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i----dpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
|.+... . ..-+++++++.++. .+..+..|++.......|.+ +.+++|.++|++||+.|++|+++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~ 261 (431)
T TIGR03251 185 LTFPLDAPNLDQVIALEEEALRQARAAFAE---RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQ 261 (431)
T ss_pred ccCCccccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecch
Confidence 111000 0 00123444555542 23456778888777777776 35999999999999999999999
Q ss_pred cchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCch-HHHH-HhcCCcccccCccCCCCCccCCCCcccc
Q 038818 270 AGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPN-ALIK-ALSTNPEFLRNKASDSKQVVDYKDWQIT 347 (486)
Q Consensus 270 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~-~~~~-~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 347 (486)
.|+.....-+.....++ ..|.+++ -|.+ | .+|++ .+++- .... .+. .+... ..|+
T Consensus 262 tG~GrtG~~~a~~~~gv-~PDi~~~--gK~~--~-~~g~~-~~~~i~~~~~~~~~-~~~~~--------------~~T~- 318 (431)
T TIGR03251 262 TGVGLTGTAWAYQQLGV-QPDIVAF--GKKT--Q-VCGIM-AGRRVDEVADNVFA-VPSRL--------------NSTW- 318 (431)
T ss_pred hccCccchHHHHHhcCC-CCCEEEe--cccC--c-cceEE-ecchHHHhhhhccc-Ccccc--------------CCCC-
Confidence 86532111111111233 5788876 4543 2 23444 44331 1110 010 00000 0011
Q ss_pred CCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhC----CCCeEEecCCCeeEEEEEeecCCCCCCCCCCccc
Q 038818 348 LSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGG----DNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEG 423 (486)
Q Consensus 348 ~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~ 423 (486)
++.+....+..+++..+..++ ..++..++.++|.+.|++ .+++..-......++.+.+.+
T Consensus 319 ~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~------------- 382 (431)
T TIGR03251 319 GGNLVDMVRATRILEIIEEER---LVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPS------------- 382 (431)
T ss_pred CCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCC-------------
Confidence 111111222333444443333 334555556666655543 332321111223455666532
Q ss_pred hHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 038818 424 ANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQE 477 (486)
Q Consensus 424 ~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~ 477 (486)
.....++.+.+.++|+++ .+. +...+|++. ....+++|||+++++|++
T Consensus 383 -~~~~~~~~~~l~~~Gvl~-~~~---g~~~lr~~P-~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 383 -TADRDEVIRQLYREGVLL-LGC---GERSIRFRP-PLTVTREEIDAAIDAIRR 430 (431)
T ss_pred -HHHHHHHHHHHHhCCeEE-ecC---CCCeEEEEC-CccCCHHHHHHHHHHHHh
Confidence 223456788888889754 221 235689987 567888999999999876
No 371
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.24 E-value=7.2e-09 Score=105.48 Aligned_cols=297 Identities=11% Similarity=0.027 Sum_probs=155.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEec-CCCchHHHHH--
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGS-DQTHSALQKA-- 188 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s-~~~H~s~~~a-- 188 (486)
...+.++.+.|.+++... + ...|+++||+|+..|+.+||... ++..|+.. ...+.+....
T Consensus 87 ~~~~~~la~~l~~~~p~~-~-------~v~f~~sGseA~e~AlklAr~~t---------gr~~i~~~~~~~~h~~~~~~~ 149 (431)
T PRK06209 87 SAIELDAAESFLELIDGA-D-------MVKFCKNGSDATSAAVRLARAYT---------GRDLVARCADHPFFSTDDWFI 149 (431)
T ss_pred CHHHHHHHHHHHHhCCcc-c-------eEEEecCHHHHHHHHHHHHHHHh---------CCCeEEEeccCcccccccccc
Confidence 344555667888876321 1 57899999999999999999762 23333322 1221111110
Q ss_pred -HHH--cCCCCC---CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCce
Q 038818 189 -AQI--AGIDPK---NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIW 262 (486)
Q Consensus 189 -~~~--~G~g~~---~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~ 262 (486)
... .|.... .+..++ .-|+++|+++|+.. +..+.+|++.......+..+++++|.++|++||+.
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~---~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~l 219 (431)
T PRK06209 150 GTTPMSAGIPASVSALTVTFR-------YNDIASLEALFEDH---PGRIACVILEPATADEPQDGFLHEVRRLCHENGAL 219 (431)
T ss_pred ccCCCCCCCChhHhccccccC-------CCCHHHHHHHHHhC---CCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCE
Confidence 000 011000 011111 23899999998642 12344566654443334445599999999999999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcC-----CcccccCccCCCCC
Q 038818 263 VHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALST-----NPEFLRNKASDSKQ 337 (486)
Q Consensus 263 lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~-----~~~y~~~~~~~~~~ 337 (486)
+++|+++.|+... .......-++ ..|.+++ .|.++..++.|.+..+++ .. +.+.. ...++.
T Consensus 220 LI~DEv~tG~~~~-~~g~~~~~gv-~PDi~t~--gK~lggG~p~~av~~~~~-i~-~~~~~~~~~~~~~~~~-------- 285 (431)
T PRK06209 220 FILDEMITGFRWH-MRGAQKLYGI-VPDLSCF--GKALGNGFAVSALAGKRE-YM-ELGGLEHTDRERVFLL-------- 285 (431)
T ss_pred EEEEcccccCCcC-cchhhHHhCC-Ccceeee--hhhhcCCcccEEEEEHHH-HH-hhhcccccCCCCceee--------
Confidence 9999998664321 1001111133 4676554 798887667888887643 22 22100 000111
Q ss_pred ccCCCCccccCCCCCCc---hHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhC----CCCeE--EecCCCeeEEEEEe
Q 038818 338 VVDYKDWQITLSRRFRA---LKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGG----DNRFE--IVAPRNFAVVCFRV 408 (486)
Q Consensus 338 ~~~~~~~~~~~sr~~~~---l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~--~~~~~~~~~v~f~~ 408 (486)
..+..... .++.+++..+-.++ ..++..++.++|++.|++ ++ +. +........+.+..
T Consensus 286 ---------~~T~~~np~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~L~~~~~~~~-~~~~vr~~G~~~~~~~~~ 352 (431)
T PRK06209 286 ---------STTHGAETHALAAAIATMAIYRDED---VIERLHEQGAKLAAGVNEAAAEHG-LQDHVRVSGRPCCLTYST 352 (431)
T ss_pred ---------ccCCCCCHHHHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeecceEEEEEec
Confidence 11111222 33344455553333 455556666666666643 32 22 11111111122211
Q ss_pred ecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 409 LPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
.... ......+...+.+.+.+.|++. . .++++ ...|++||++++++|++++..+
T Consensus 353 ~~~~--------~~~~~~~~~~~~~~l~~~Gi~~-p--------~l~is---~~ht~~dId~~l~~l~~~l~~~ 406 (431)
T PRK06209 353 LDGN--------GQPSQAFRTLFLQETIRRGVLM-P--------SLVVS---YAHGDADIERTIDAVHGALGVY 406 (431)
T ss_pred CCcc--------cCCcHHHHHHHHHHHHHCCccc-c--------ccccc---ccCCHHHHHHHHHHHHHHHHHH
Confidence 1110 0011234456777888889743 2 13333 3557789999999999988776
No 372
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.24 E-value=1.1e-08 Score=101.17 Aligned_cols=323 Identities=14% Similarity=0.078 Sum_probs=173.6
Q ss_pred HHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEE-ecCCCchHHHHHHHHcCCC-
Q 038818 118 VMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVY-GSDQTHSALQKAAQIAGID- 195 (486)
Q Consensus 118 ~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~a~~~~G~g- 195 (486)
+.+.|+++..-..- ...+|++|||+|+-+|+.+++..+..+ |.. .+.+++ ...-.|-+-.-++...|..
T Consensus 92 LA~~L~~~aP~~~l------~~vFf~~sGSeAvEtAlKma~qY~~~~-G~p--~r~~~Isr~~gYHG~T~ga~Sv~g~~~ 162 (449)
T COG0161 92 LAEKLAELAPEGGL------DHVFFTDSGSEAVETALKMALQYWRAR-GQP--QRKKFISRRNGYHGDTLGAMSVGGPVA 162 (449)
T ss_pred HHHHHHHhCCCCCc------cEEEEeCCchHHHHHHHHHHHHHHHhc-CCC--cceEEEEeccCcCcccchheeccCchh
Confidence 44667777652111 268999999999999999999876443 221 132233 3344554444444444421
Q ss_pred ---------CCCeEEEecCC---CC-Ccc------cCHHHHHHHHHHHHHCC-CccEEEEeecCCcc-ccccCC----ch
Q 038818 196 ---------PKNFRAIKTTK---SS-SFT------LTPESLQAAIDLDIQAG-LIPLFLCATVGTTA-ITTVDP----LG 250 (486)
Q Consensus 196 ---------~~~v~~v~~d~---~~-~~~------~d~~~L~~~l~~~~~~g-~~p~~vv~~~gtt~-~G~idp----l~ 250 (486)
...+..+|... .. .+. -..++||+.|.+. | .....+++.-.--. .|.+-| ++
T Consensus 163 ~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~---g~~~IAAfI~EPv~g~agG~~~pp~~Yl~ 239 (449)
T COG0161 163 LRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEH---GPETIAAFIVEPVVGGAGGMLVPPPGYLK 239 (449)
T ss_pred hhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhc---CcccEEEEEecccccccCCcccCChHHHH
Confidence 11223333321 00 011 2245556555542 3 33445665544333 566644 89
Q ss_pred HHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcCC-cccc
Q 038818 251 PLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALSTN-PEFL 328 (486)
Q Consensus 251 ~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~~-~~y~ 328 (486)
++.+||++||+.|+.|+.-.|+.--..-+...-.++ .-|.+++ -|.+.+.| +.|.++++++-. +.+... ..-+
T Consensus 240 ~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi-~PDi~~~--aKGLT~GY~Pl~a~l~~~~I~--~~~~~~~~~~f 314 (449)
T COG0161 240 RVREICDKYGILLIADEVATGFGRTGKMFACEHAGI-VPDILCL--AKGLTGGYLPLSAVLTSDRIY--EAFSDGDAGAF 314 (449)
T ss_pred HHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCC-CCCeeee--cccccccchhhHhHhhhHHHH--HHHhcccCCee
Confidence 999999999999999998766532111111111122 4577776 47766443 567777765521 233221 1111
Q ss_pred cCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEecCCC--eeEEE
Q 038818 329 RNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGG-DNRFEIVAPRN--FAVVC 405 (486)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~~--~~~v~ 405 (486)
.-..+.....+++.+++..+..---+.++++..++..+|.+.|++ +++...+.+.+ .-+..
T Consensus 315 ----------------~HG~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~ 378 (449)
T COG0161 315 ----------------MHGHTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGA 378 (449)
T ss_pred ----------------ccCCccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEE
Confidence 111222345566666665543222234566777888888888876 43333343322 22334
Q ss_pred EEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 406 FRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 406 f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
+.+..+... . ..-......++.+.+.++|.+ +-+. |. .+=++. -+-.|+++||++++.+++.+++..+
T Consensus 379 iElv~d~~t----~-~~f~~~~~~~~~~~~~e~Gl~-iRp~---g~-~i~~~P-Pliit~~eid~l~~~l~~al~~~~~ 446 (449)
T COG0161 379 IELVADKAT----K-TPFEARVGARVRAAALERGLL-IRPL---GD-VIYLMP-PLIITREEIDELVDALREALDETLA 446 (449)
T ss_pred EEEeccccc----c-cchhhhHHHHHHHHHHHCCeE-Eeec---CC-EEEEcC-CccCCHHHHHHHHHHHHHHHHHHHh
Confidence 444433210 0 000134456778888888974 4333 22 233333 2356889999999999999987664
No 373
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.21 E-value=3.9e-08 Score=93.41 Aligned_cols=292 Identities=11% Similarity=0.019 Sum_probs=164.2
Q ss_pred ceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCC-----------
Q 038818 139 GGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKS----------- 207 (486)
Q Consensus 139 ~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~----------- 207 (486)
..+|++||||||-+||+++|...- .-.+|-.....|-+-.-++...|++ .+..+.+..
T Consensus 111 ~vfF~nsGsEANelal~mar~Yt~--------~~diIa~r~~YHG~t~~t~glt~~~---~~k~~~~~~~~~~~~~~~Pd 179 (442)
T KOG1404|consen 111 VVFFVNSGSEANELALKMARLYTG--------NLDIIARRNSYHGNTLYTLGLTGLS---PWKQNFPGVASGVHHTMNPD 179 (442)
T ss_pred EEEEecCCchHHHHHHHHHHHhcC--------CceEEEeeccccCCchhhcccccCC---cccccCCCCCCcccccCCCC
Confidence 589999999999999999998631 2244545566676656666666652 222211100
Q ss_pred ---CCccc-----CHHHHHHHHHHHHHCC--CccEEEEeecCCccccccCC----chHHHHHHHHhCceEEeeccccchh
Q 038818 208 ---SSFTL-----TPESLQAAIDLDIQAG--LIPLFLCATVGTTAITTVDP----LGPLCDIAKRYSIWVHVDAAYAGSA 273 (486)
Q Consensus 208 ---~~~~~-----d~~~L~~~l~~~~~~g--~~p~~vv~~~gtt~~G~idp----l~~I~~i~~~~g~~lhvD~a~g~~~ 273 (486)
+-+.= ..+.+.+.+++-...+ ..+...++......-|.+.+ +++..++|+++|..++.|+++.|+.
T Consensus 180 p~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfG 259 (442)
T KOG1404|consen 180 PYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFG 259 (442)
T ss_pred cccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccc
Confidence 00111 1333444333322111 12455666666666688876 7999999999999999999997764
Q ss_pred ccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCC
Q 038818 274 CICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFR 353 (486)
Q Consensus 274 ~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~ 353 (486)
....-+..--.++ .-|.+|+ -|.++...+.|.+++..+ +.+.+.....|.+. -.+.+..
T Consensus 260 RtG~~wgfe~h~v-~PDIvTm--AKgiGnG~Pl~AVvtt~E--Ia~v~~~~~~~fnT----------------yggnP~a 318 (442)
T KOG1404|consen 260 RTGHMWGFESHGV-VPDIVTM--AKGIGNGFPLGAVVTTPE--IADVLNQKSSHFNT----------------YGGNPVA 318 (442)
T ss_pred cccccccccccCC-CccHHHH--HhhccCCCcceeeecCHH--HHHHHHhccccccc----------------cCCCchh
Confidence 3221010000011 3455554 588887788898888765 22333332212211 1111222
Q ss_pred chHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEecCCCe--eEEEEEeecCC--CCCCCCCCccchHHHH
Q 038818 354 ALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDN-RFEIVAPRNF--AVVCFRVLPSA--SGLGDGKANEGANELN 428 (486)
Q Consensus 354 ~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~~--~~v~f~~~~~~--~~~~~~~~~~~~~~~~ 428 (486)
.....+.|+.+-+ +++.++..+...||.+.|.++. ..+++++.+. -++...+..+. ... .+ ....
T Consensus 319 ~avg~aVL~Vike---e~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~p-----p~--~~~~ 388 (442)
T KOG1404|consen 319 CAVGLAVLKVIKE---ENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKP-----PA--TAEG 388 (442)
T ss_pred HHHHHHHHHHHHH---HhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCC-----cc--hHHH
Confidence 2222334444433 4566778889999999997753 3556655432 23333332221 000 01 3334
Q ss_pred HHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHH
Q 038818 429 RKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVV 475 (486)
Q Consensus 429 ~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l 475 (486)
..+.+.+.+.|.++ ....+.|. ++|++. ..-.|++|||.+++..
T Consensus 389 ~~i~~~cke~Gvlv-g~g~i~G~-vfriaP-PlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 389 AVIGEQCKELGVLV-GKGGIHGN-VFRIAP-PLCITKEDIDFAVEYF 432 (442)
T ss_pred HHHHHHHHHhCeee-ecccccce-EEEecC-CeeccHHHHHHHHHHH
Confidence 56677788889854 55555655 899987 3355888997777755
No 374
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.17 E-value=8e-09 Score=97.83 Aligned_cols=306 Identities=13% Similarity=0.087 Sum_probs=176.2
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCe-EEEecCCCchHHH
Q 038818 108 SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRL-VVYGSDQTHSALQ 186 (486)
Q Consensus 108 ~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~~ 186 (486)
+..+..+-.++.+.+++|++.|+++ .-+++.+|+|...-++.+..... .+. -|....-+..+..
T Consensus 45 sk~~~~v~~~a~~~lreLl~iPd~Y-----~VlflqGGat~qf~~~p~nLl~~----------~~~~yv~~g~Ws~~a~~ 109 (365)
T COG1932 45 SKEFKNVLEEAEKDLRELLNIPDDY-----KVLFLQGGATGQFAMAPMNLLGK----------RGTDYVDTGAWSEFAIK 109 (365)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCccHHHHHHHHHhhhcc----------cCceeEeeeehhHhHHH
Confidence 3445666677889999999999986 23455556665544443333221 121 2322222333333
Q ss_pred HHHHHcCCCCCCeEEEecCCCCC-cccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC-CchHHHHHHHHhCceEE
Q 038818 187 KAAQIAGIDPKNFRAIKTTKSSS-FTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD-PLGPLCDIAKRYSIWVH 264 (486)
Q Consensus 187 ~a~~~~G~g~~~v~~v~~d~~~~-~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id-pl~~I~~i~~~~g~~lh 264 (486)
.+ +.++... .+..+...+.+. ...+++... +.++. .+|..++..|.+|.-- +...+.. +..++
T Consensus 110 eA-~~~~~~~-~~~~~~~~~~~~~~iP~~~~~~--~~~~~------ayv~~~~NeTi~Gv~v~~~p~~~~-----~~~~v 174 (365)
T COG1932 110 EA-KKVGKQP-KLIDARIEEAGYGSIPDLSKWD--FSDND------AYVHFCWNETISGVEVPELPDIGS-----DGLLV 174 (365)
T ss_pred HH-HHhcccc-cccccceeccCccCCCChhhcc--cCCCc------cEEEEecCCcccceEccCCCCCCC-----CceEE
Confidence 33 3333200 222222111111 234555444 33321 2699999999999753 3333331 17899
Q ss_pred eeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcC-Cccccc-CccCCCCCccCCC
Q 038818 265 VDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALST-NPEFLR-NKASDSKQVVDYK 342 (486)
Q Consensus 265 vD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~-~~~y~~-~~~~~~~~~~~~~ 342 (486)
+|++.+.+....+ +.+.|.|.++.+|.++ |-|.+++++|++.. .+.-.. .|+-+. ......+..++
T Consensus 175 ~D~SS~ilsr~iD--------vsk~dviyagaQKnlG-paGltvvIvr~~~l-~r~~~~~~P~if~y~~~~~~~s~yN-- 242 (365)
T COG1932 175 ADASSAILSRPID--------VSKYDVIYAGAQKNLG-PAGLTVVIVRPDLL-ERAESYTLPSIFDYLTHADNGSMYN-- 242 (365)
T ss_pred EecccHHhcCCCC--------hhHcceEEEehhhccC-ccceEEEEEcHHHH-hcccccCCchHhhchhhhccCCccC--
Confidence 9987755443332 4589999999999987 56799999987643 222221 221111 00000011110
Q ss_pred CccccCCCCCCchHHHHH---HHHh-chHHHHHHHHHHHHHHHHHHHHHhCCCCeEE-ecC--C-CeeEEEEEeecCCCC
Q 038818 343 DWQITLSRRFRALKLWLV---LRSF-GVANLRNFLRSHVRMAQLFQELVGGDNRFEI-VAP--R-NFAVVCFRVLPSASG 414 (486)
Q Consensus 343 ~~~~~~sr~~~~l~~~~~---l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~-~~~--~-~~~~v~f~~~~~~~~ 414 (486)
-...++++.. ++.+ ...|++.+.++..+.++.|.+.+.+. +|.. ... . ..-.|||.+..
T Consensus 243 --------TPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s-~fy~~~v~~~~RS~mnV~f~~~~---- 309 (365)
T COG1932 243 --------TPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKS-DFYRNLVAKANRSRMNVTFTLVD---- 309 (365)
T ss_pred --------CcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC-CccccccchhhccceeEEEEcCc----
Confidence 0122333332 2222 44678999999999999999999987 4432 111 1 23468888874
Q ss_pred CCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 415 LGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 415 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
.++++.+.+++.+.|.+...+. +-.+.+|+++-| ....++++.|++-++...++
T Consensus 310 ----------~~ld~~fv~eae~~gl~~lkGh--r~vgGmRasiyn-A~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 310 ----------AELDKGFVAEAEAAGLIYLKGH--RSVGGLRASIYN-AVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred ----------HHHHHHHHHHHHHcCCceeccc--cCCCceeeeeec-CCCHHHHHHHHHHHHHHHHh
Confidence 5677888888888887665552 223449999965 56667999999999887654
No 375
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.14 E-value=2.8e-08 Score=92.09 Aligned_cols=302 Identities=12% Similarity=0.156 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHH----
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKA---- 188 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a---- 188 (486)
.+--+..+.+.++||++. ..-+++|.||+-.|+..+|.|-....+.......++.+-..-|-.-..+
T Consensus 101 d~~~~f~~~vt~lf~~~k---------vlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s 171 (427)
T KOG1402|consen 101 DVLGEFAEYVTKLFGYDK---------VLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLS 171 (427)
T ss_pred hhHHHHHHHHHHhcCcce---------eeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEec
Confidence 344455578899999864 3457778999999999999876544322111122222222233110000
Q ss_pred ---HHHcCCCC---CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHHHHHH
Q 038818 189 ---AQIAGIDP---KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCDIAKR 258 (486)
Q Consensus 189 ---~~~~G~g~---~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~i~~~ 258 (486)
-.+.|.|. ..+..||.+ |.++|+.+|+... ....++.--....|.+-| +++..++|.+
T Consensus 172 ~d~ds~~~fgp~~P~~~~~v~Y~-------d~eale~~l~~~~-----vaaFivEPIQGEaGVvvP~~GYL~~vreLCtk 239 (427)
T KOG1402|consen 172 TDPDSWDGFGPFLPGVVDKVPYG-------DAEALEVALKSPN-----VAAFIVEPIQGEAGVVVPPPGYLKKVRELCTK 239 (427)
T ss_pred CCcchhhccCCCCCCcceeeccC-------CHHHHHHHhcCCC-----eeEEEeeccccccceEeCCchhHHHHHHHHHh
Confidence 01222221 125566653 8899999998632 223455555667788754 8999999999
Q ss_pred hCceEEeeccccchhc----cCccchhhhcCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccC
Q 038818 259 YSIWVHVDAAYAGSAC----ICPEFRHFIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKAS 333 (486)
Q Consensus 259 ~g~~lhvD~a~g~~~~----~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~ 333 (486)
|+++++.|..+.|... .+-++... .-|.+.+ .|.+. +-++.+.+++.++-.+ ...|+--
T Consensus 240 ynvl~I~DEvQTGl~RTGk~la~d~env-----~PDivil--gKalSGG~~Pvsavl~~~~im~----~~~pgeH----- 303 (427)
T KOG1402|consen 240 YNVLLIADEVQTGLARTGKLLACDYENV-----RPDIVIL--GKALSGGVYPVSAVLADDDIML----NIKPGEH----- 303 (427)
T ss_pred hcEEEEehhhhhcccccCcEEEeehhhc-----CCCeEEE--eccccCCeeeeEEEEecHHHHh----ccCCCcc-----
Confidence 9999999999876432 11122221 4565554 46665 4456777776654332 1121110
Q ss_pred CCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCC-e-EEecC--CCeeEEEEEee
Q 038818 334 DSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNR-F-EIVAP--RNFAVVCFRVL 409 (486)
Q Consensus 334 ~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~-~-~~~~~--~~~~~v~f~~~ 409 (486)
..+.....|+.-.+++.+..-.-+.+.+++..+...|+.+|.+++. | .++.. -..-+....+.
T Consensus 304 -------------gsTyggNpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~ 370 (427)
T KOG1402|consen 304 -------------GSTYGGNPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVIN 370 (427)
T ss_pred -------------ccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEec
Confidence 0111234566666666654444567888999999999999988752 2 01111 11222333333
Q ss_pred cCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 410 PSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
+... . ....-.++-.+.+.|.+ ..+..+ ..+||.. -...+++|+++-+++|.+.+
T Consensus 371 ~~~~--------~--~~~aw~~cl~lk~~g~L--AkptH~--~IiRfaP-PL~I~e~dl~eg~e~i~k~i 425 (427)
T KOG1402|consen 371 PSKT--------S--GQDAWDVCLALKENGLL--AKPTHG--NIIRFAP-PLVISEEDLREGIEAIEKTI 425 (427)
T ss_pred cccc--------c--chhHHHHHHcccccccc--cCCCCC--CeEEecC-CcccCHHHHHHHHHHHHHHh
Confidence 3210 1 11122445455566752 222222 3799987 35678999999999998865
No 376
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.12 E-value=1.1e-08 Score=93.73 Aligned_cols=329 Identities=13% Similarity=0.122 Sum_probs=201.9
Q ss_pred HHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcC
Q 038818 114 LENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAG 193 (486)
Q Consensus 114 le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G 193 (486)
...-+...++.+.|..+. ...+.++ -.+|+..++..--+-..++ .+..-....+- ..||++..-+++-|
T Consensus 112 ~De~il~l~~~iVGA~e~-------EvavmNs-LTvNlh~Ll~sFyKPTekR-~KILlE~kaFP--SDhYAiesQ~~lhG 180 (465)
T KOG3846|consen 112 IDEPILPLLAPIVGAQEN-------EVAVMNS-LTVNLHSLLISFYKPTEKR-FKILLEKKAFP--SDHYAIESQCKLHG 180 (465)
T ss_pred cchhhhhhhhhhccCCch-------hhhhHhh-hhhHHHHHHHHhcCCcchh-hhhhhccCCCC--chHHHHHhhhhhcC
Confidence 344566788899998765 3444443 2356555554322100000 00000111222 37999999999999
Q ss_pred CC-CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccch
Q 038818 194 ID-PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGS 272 (486)
Q Consensus 194 ~g-~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~ 272 (486)
+. .+..+.+...+. .-.+..+++-..|++ +|....+|+.+.....||..-++.+|...-+..|+++-.|-||+.+
T Consensus 181 ~~~e~sm~~iePREG-EetlRteDILd~IEk---ngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvg 256 (465)
T KOG3846|consen 181 ISPENSMIQIEPREG-EETLRTEDILDTIEK---NGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVG 256 (465)
T ss_pred CChHHheEEeccccc-ccchhHHHHHHHHHh---cCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhc
Confidence 95 335566665543 347888888777765 4666778888889999999999999997778889999999998765
Q ss_pred hccCccchhhhcCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccC-----CCCccc
Q 038818 273 ACICPEFRHFIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVD-----YKDWQI 346 (486)
Q Consensus 273 ~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~-----~~~~~~ 346 (486)
-....-+.+ ++|+-+|...|++. ++.|.|.+++.++..- .......++.....+.-..+.+ .+..++
T Consensus 257 NVpL~LHdW------gVDFACWCSYKYlnaGaGgIgGlFvHekh~~-~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~Gf 329 (465)
T KOG3846|consen 257 NVPLQLHDW------GVDFACWCSYKYLNAGAGGIGGLFVHEKHTK-ESLPRLAGWWGHDPSKRFQMDNVLELIPGALGF 329 (465)
T ss_pred CCceEEeec------CCceEEEeeecccccCCCccceeeeehhhhc-chhhHHhhhccCCcchhhhhccccccCcccccc
Confidence 433221111 89999999999999 6667888888765331 1112222333222111111111 111111
Q ss_pred cCCCCC--CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCC-----------eEEecCC----CeeEEEEEee
Q 038818 347 TLSRRF--RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNR-----------FEIVAPR----NFAVVCFRVL 409 (486)
Q Consensus 347 ~~sr~~--~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~-----------~~~~~~~----~~~~v~f~~~ 409 (486)
..|.+. ...++-.++..+..-.+.++.++..-++.|+...++...+ +.++.|. +....+..+.
T Consensus 330 RiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fs 409 (465)
T KOG3846|consen 330 RISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFS 409 (465)
T ss_pred ccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeC
Confidence 122221 1245555666666667888888989999998888765432 2333332 1223333333
Q ss_pred cCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 410 PSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
.+ +..+++.|.++|.++ .-...+.+|++....+++-.||-.++++|.++++.+-+
T Consensus 410 sp----------------~~~vfqeL~krGv~~----DkR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~es 464 (465)
T KOG3846|consen 410 SP----------------TPKVFQELHKRGVIG----DKRRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKLES 464 (465)
T ss_pred CC----------------chHHHHHHHHcCeec----cccCCCceEeecchhhccHHHHHHHHHHHHHHHHHhhc
Confidence 22 235666777778642 12345789999988899999999999999999887643
No 377
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.11 E-value=1.7e-07 Score=89.84 Aligned_cols=224 Identities=13% Similarity=0.023 Sum_probs=131.9
Q ss_pred ceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCC---C-C-CcccC
Q 038818 139 GGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTK---S-S-SFTLT 213 (486)
Q Consensus 139 ~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~---~-~-~~~~d 213 (486)
...|.++||+||..||.+||.....+.... .-.+|......|-----++...+. .-...|.++ + . ----|
T Consensus 118 rvff~nsGTeAne~ALK~Ark~~~~~~~~~--~t~~Iaf~nsyHG~tlgals~~~~---s~y~~~~~p~~p~v~~~~ynd 192 (433)
T KOG1401|consen 118 RVFFCNSGTEANETALKFARKFTGKKHPEK--KTKFIAFENSYHGRTLGALSVTGN---SKYGLPFDPIAPDVVTAEYND 192 (433)
T ss_pred EEEEecCCcHHHHHHHHHHHHhhcccCCcc--ceeEEEEecCcCCcchhHHHhhcc---cccCCCCCCCCCceeecccCC
Confidence 689999999999999999998654332111 112444555566433333332222 111111110 0 0 00237
Q ss_pred HHHHHHHHHHHHHCCCccEEEEeecCCcccccc--CC--chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCC
Q 038818 214 PESLQAAIDLDIQAGLIPLFLCATVGTTAITTV--DP--LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGA 289 (486)
Q Consensus 214 ~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i--dp--l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~a 289 (486)
+.+|++.++.... . +..|++....-.-|.+ +| +..|.++|+++|+.++.|+.+.|+....+.+....-++ .-
T Consensus 193 ~t~l~k~~~~h~~--~-IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~-~P 268 (433)
T KOG1401|consen 193 STALEKLFESHKG--E-IAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGV-TP 268 (433)
T ss_pred HHHHHHHHHhCCC--c-eEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCc-CC
Confidence 9999999987642 2 4467777777655555 33 67999999999999999999988655554444433332 45
Q ss_pred CceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHH---HHHHhc-
Q 038818 290 DSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWL---VLRSFG- 365 (486)
Q Consensus 290 Dsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~---~l~~~g- 365 (486)
|..|+ -|.++...+.|..+++++- ...++...+ +.+ ..+-...++++-+ ++..+.
T Consensus 269 DI~t~--aK~L~gGlPigA~~v~~kV--~~~i~~~~~-l~h----------------g~Tf~gnpLacsa~~~~l~~l~~ 327 (433)
T KOG1401|consen 269 DITTV--AKPLGGGLPIGATGVRDKV--AEMISPGDH-LYH----------------GGTFSGNPLACSAGIKVLDELKD 327 (433)
T ss_pred cceee--hhhccCCceeEEEeehHHH--HhhcCCCCc-ccc----------------CcccCCChhhhhHHHHHHHHHcC
Confidence 66665 6888877889999998762 223332222 111 1111234444433 344443
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 038818 366 VANLRNFLRSHVRMAQLFQELVGGDNR 392 (486)
Q Consensus 366 ~~g~~~~~~~~~~~a~~l~~~L~~~~~ 392 (486)
.+.+.++-+....+++.+.+.+.+-+.
T Consensus 328 ~e~~k~vs~~~k~L~~~l~e~~~~~~~ 354 (433)
T KOG1401|consen 328 PETLKNVSKIGKELRKLLDEYLKKTPN 354 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 344555556666777777777776543
No 378
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.97 E-value=1.9e-06 Score=93.23 Aligned_cols=231 Identities=14% Similarity=0.069 Sum_probs=125.2
Q ss_pred HHHHHHHHHHH--HCCCccEEEEeecC-CccccccCC----chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCC
Q 038818 215 ESLQAAIDLDI--QAGLIPLFLCATVG-TTAITTVDP----LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIE 287 (486)
Q Consensus 215 ~~L~~~l~~~~--~~g~~p~~vv~~~g-tt~~G~idp----l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~ 287 (486)
+.+++.|++.. ..+..+..|++.-. ....|.+-| +++|.++|++||+.|+.|+++.|+.-...-+....-++
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv- 645 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGC- 645 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCC-
Confidence 55666665421 12334556666653 344466643 89999999999999999999988643322222212233
Q ss_pred CCCceeeccccccCCCC-cceEEEeeCchHHHHHhcCCc--ccccCccCCCCCccCCCCccccCCCCCCchHHHHH---H
Q 038818 288 GADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALSTNP--EFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLV---L 361 (486)
Q Consensus 288 ~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~~~--~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~---l 361 (486)
..|.+++ -|.+++.+ +.|.++++++- .+.|.... ..+. ...+....++++.++ +
T Consensus 646 ~PDIi~~--gKgLtgG~~Plaa~l~~~~I--~~~f~~~~~~~~~~----------------hg~Ty~gnpl~cAaala~L 705 (817)
T PLN02974 646 KPDIACY--AKLLTGGLVPLAATLATEEV--FEAFRGPSKLDALL----------------HGHSYTAHPMGCAAAAKAL 705 (817)
T ss_pred CCCEEee--cccccCCCCccEEEEEcHHH--HHhhccccccCCcc----------------cCCCCCcCHHHHHHHHHHH
Confidence 4788876 58888774 78888887552 22332110 0000 011222344444444 4
Q ss_pred HHhchH-HHHHHHHHHHHHHHHHHHHH----hCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHH
Q 038818 362 RSFGVA-NLRNFLRSHVRMAQLFQELV----GGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESIN 436 (486)
Q Consensus 362 ~~~g~~-g~~~~~~~~~~~a~~l~~~L----~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 436 (486)
+.+-.+ -++.+.++..++..++.+.| .++|.+.=+. -...++.+.+..+... .........++.+.+.
T Consensus 706 ~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VR-g~Gl~~~iel~~~~~~------~~~~~~~a~~v~~~~~ 778 (817)
T PLN02974 706 QWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVV-SLGTVLALELDAEGSG------SGYSSLYARSVVRRLR 778 (817)
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEE-eeeeEEEEEEecCCcc------cccchHHHHHHHHHHH
Confidence 444332 23344455555555555444 4444332111 1123445555432100 0001234566777777
Q ss_pred -hcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 437 -ASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 437 -~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
++|.+. .+ . + +.+|+.. .+.+++++++++++.|.+.+
T Consensus 779 ~~~Gl~~-r~--~-G-nvi~l~p-P~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 779 REDGIYA-RP--L-G-NVVYLMC-GPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred HhCCEEE-Ee--c-C-CEEEEeC-CCCCCHHHHHHHHHHHHHHh
Confidence 788643 22 1 2 4678765 57889999999999998754
No 379
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=98.92 E-value=4.4e-08 Score=87.97 Aligned_cols=277 Identities=12% Similarity=0.063 Sum_probs=157.1
Q ss_pred ceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHH
Q 038818 139 GGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQ 218 (486)
Q Consensus 139 ~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~ 218 (486)
...+--|+-|.+-..+.+.+.. ++..|+....++.-..-.|.+.++ +|+.+|.++ +|.||+|++.
T Consensus 88 nic~GvGsDE~ID~iiR~~c~P----------GkeKIl~cPPtysMY~v~A~iNd~---eVvkvpl~p--dF~lnvdai~ 152 (375)
T KOG0633|consen 88 NICVGVGSDELIDLIIRCVCDP----------GKEKILDCPPTYSMYVVDAAINDA---EVVKVPLNP--DFSLNVDAIA 152 (375)
T ss_pred ceEEecCcHHHHHHHHhheecC----------CccceeecCCcceeEEEEeecCCc---eEEEecCCC--CccccHHHHH
Confidence 4455455455554445555442 334454443333222223456677 999999987 7899999999
Q ss_pred HHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh-CceEEeeccccchhccCccchhhhcCCCCCCc-eeecc
Q 038818 219 AAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY-SIWVHVDAAYAGSACICPEFRHFIDGIEGADS-FSLNA 296 (486)
Q Consensus 219 ~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~-g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDs-i~~~~ 296 (486)
+.++.+.+ |.++++|++.|++|.+-..+.|.+|.+-- |..++||.||--+-......+ +... .-.. +.-..
T Consensus 153 evl~~ds~----iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~-lV~k--YpNLivlqTl 225 (375)
T KOG0633|consen 153 EVLELDSK----IKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMK-LVKK--YPNLIVLQTL 225 (375)
T ss_pred HHHhcccc----ceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccch-HhHh--CCceeehhhh
Confidence 99987643 67899999999999998777777777654 688999999843321110100 0111 1111 22234
Q ss_pred ccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh---chHHHHHH
Q 038818 297 HKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF---GVANLRNF 372 (486)
Q Consensus 297 hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~---g~~g~~~~ 372 (486)
.|.++ +....|+-++.-. ..+-..+..++|=.. .+.--++++++ ..+.++..
T Consensus 226 SKsfGLAGiRvG~~~~~~~-ia~iln~~KaPYNiS-----------------------~~~s~~AL~Als~~n~kkme~~ 281 (375)
T KOG0633|consen 226 SKSFGLAGIRVGYGAFPLS-IAEILNRAKAPYNIS-----------------------VAGSVAALAALSDSNGKKMEDV 281 (375)
T ss_pred hhhcCcceeEeecccccHH-HHHHHHhccCCcccc-----------------------chhHHHHHHhcCcccchHHHHH
Confidence 55555 3333444333222 111122333344211 11112333333 23455666
Q ss_pred HHHHHHHHHHHHHHHhCCCCeE-EecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHH-HhcCcEEEeee-eEC
Q 038818 373 LRSHVRMAQLFQELVGGDNRFE-IVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESI-NASGQLYVSHG-MVA 449 (486)
Q Consensus 373 ~~~~~~~a~~l~~~L~~~~~~~-~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~-~~~ 449 (486)
.+...+-..+|.+.|.++|.+. ..++...+.+..++.+.. +...++++..+ ..+|+++-... ...
T Consensus 282 rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~------------n~~akkly~q~at~~gVvVRfrgse~~ 349 (375)
T KOG0633|consen 282 RDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGGD------------NGMAKKLYKQDATKMGVVVRFRGSEEG 349 (375)
T ss_pred HHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCCC------------cHHHHHHHHHHHHhcceEEEEcCCccc
Confidence 6777777888889998887664 344556777777776532 45556665554 45676432222 222
Q ss_pred CEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 038818 450 GIYFIRFAVGATLTEDRHVIAAWKVVQE 477 (486)
Q Consensus 450 ~~~~lR~~~~~~~tt~~did~~i~~l~~ 477 (486)
-.+++|++++. +|+=+-+++-+++
T Consensus 350 c~G~lRitvGt----~EentvL~k~~K~ 373 (375)
T KOG0633|consen 350 CKGYLRITVGT----PEENTVLMKCLKQ 373 (375)
T ss_pred cceeEEEEcCC----cccchHHHHHHHh
Confidence 37899999853 3345556665554
No 380
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.90 E-value=3.6e-07 Score=90.06 Aligned_cols=189 Identities=13% Similarity=0.018 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.....++.++|.++++-.. ....++++|++|+..|+..+|...... ...+ +..++......|-...-+...
T Consensus 58 ~~~~~~la~~L~~~~p~~~-------~~v~f~~sGseAve~Alkla~~~~~~~-~~~~-r~~il~~~~~yHG~t~~~~s~ 128 (339)
T PF00202_consen 58 HPEAAELAEKLAELFPGGL-------DRVFFANSGSEAVEAALKLARQYHNKR-AYTG-RRKILAFEGSYHGRTLGALSL 128 (339)
T ss_dssp EHHHHHHHHHHHHHSSTTE-------EEEEEESSHHHHHHHHHHHHHHHHHHT-HHHT-TTEEEEETTTB-TSSHHHHHH
T ss_pred ccchhhhhhhhhhcccccc-------ceeeeccCchHHHHHHHHHhhcccccc-cccC-CceEEEeeeeeeccCcccccc
Confidence 4445567788888883322 268999999999999999999321110 0011 334444555566433333332
Q ss_pred cC---------CCCCCeEEEecCCCCC---cccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHHH
Q 038818 192 AG---------IDPKNFRAIKTTKSSS---FTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCDI 255 (486)
Q Consensus 192 ~G---------~g~~~v~~v~~d~~~~---~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~i 255 (486)
.+ .....+..+|.+.... ..-..+.+++.+.+... .....|++.-.....|.+.| +++|.++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~iaavivEPi~g~~G~~~~~~~~l~~l~~l 206 (339)
T PF00202_consen 129 TGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNA--DEIAAVIVEPIQGEGGMIPPPPEYLRELREL 206 (339)
T ss_dssp SSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHG--GGEEEEEEESSBTTTTSBEE-TTHHHHHHHH
T ss_pred cCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcC--CcEEEEEEeccccccCccccccchhhehccc
Confidence 21 1123567777652100 00012224444443322 23456777776666676532 7999999
Q ss_pred HHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCc
Q 038818 256 AKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNP 314 (486)
Q Consensus 256 ~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~ 314 (486)
|++||+.+++|+.+.|+.....-+.....++ ..|.++++ |.++...+.|.++++++
T Consensus 207 c~~~gillI~DEV~tG~gRtG~~~a~~~~gv-~PDiv~~g--K~l~gG~p~sav~~~~~ 262 (339)
T PF00202_consen 207 CREHGILLIADEVQTGFGRTGKFFASEHYGV-DPDIVTFG--KGLGGGLPISAVLGSEE 262 (339)
T ss_dssp HHHTT-EEEEEETTTTTTTTSSSSGHHHHTS-SSSEEEEE--GGGGTTSSEEEEEEEHH
T ss_pred ccccccceecccccccccccCCccceecccc-cCcccccc--cchhhhhhcccccccch
Confidence 9999999999999987643322222222344 57999986 99987789999998865
No 381
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.87 E-value=1.1e-07 Score=92.02 Aligned_cols=150 Identities=19% Similarity=0.161 Sum_probs=102.2
Q ss_pred ceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEE----EecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCH
Q 038818 139 GGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVV----YGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTP 214 (486)
Q Consensus 139 ~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v----~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~ 214 (486)
.+++++..+.|.+..+.+.... ...++ .+. ..|+++...++..|. +++.|... .+-..
T Consensus 85 a~~ivnnn~aAVll~~~al~~~----------~EvVis~g~lV~-gg~~~v~d~~~~aG~---~l~EvG~t----n~t~~ 146 (395)
T COG1921 85 AAAIVNNNAAAVLLTLNALAEG----------KEVVVSRGELVE-GGAFRVPDIIRLAGA---KLVEVGTT----NRTHL 146 (395)
T ss_pred heeeECCcHHHHHHHHhhhccC----------CeEEEEcccccc-CCCCChhHHHHHcCC---EEEEeccc----CcCCH
Confidence 5677887666665544443321 12122 122 478999999999999 88777643 37799
Q ss_pred HHHHHHHHHHHHCCCccEEEEeecCCcccccc--CCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCce
Q 038818 215 ESLQAAIDLDIQAGLIPLFLCATVGTTAITTV--DPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSF 292 (486)
Q Consensus 215 ~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i--dpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi 292 (486)
.+++.+|.+.++ ++.-++.++. |.. -+++++++|||++|++++||.+-|...-.-+..+..++ .++|.+
T Consensus 147 ~d~~~AIne~ta------~llkV~s~~~-~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la--~GaDLV 217 (395)
T COG1921 147 KDYELAINENTA------LLLKVHSSNY-GFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALA--LGADLV 217 (395)
T ss_pred HHHHHHhccCCe------eEEEEeeccc-cccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHh--cCCCEE
Confidence 999999998875 4555554443 443 46778999999999999999988664332233333332 389999
Q ss_pred eeccccccCCCCcceEEEeeCchHH
Q 038818 293 SLNAHKWFFTTLDCCCLWVKNPNAL 317 (486)
Q Consensus 293 ~~~~hK~l~~p~~~g~~~~~~~~~~ 317 (486)
++|++|.|++|. .|++.- ++++.
T Consensus 218 ~~SgdKllgGPq-aGii~G-kKelI 240 (395)
T COG1921 218 SFSGDKLLGGPQ-AGIIVG-KKELI 240 (395)
T ss_pred EEecchhcCCCc-cceEec-hHHHH
Confidence 999999999996 565554 44444
No 382
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.85 E-value=1.7e-06 Score=82.63 Aligned_cols=281 Identities=16% Similarity=0.087 Sum_probs=170.3
Q ss_pred ceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHH
Q 038818 139 GGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQ 218 (486)
Q Consensus 139 ~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~ 218 (486)
..+=|.|||-|+-.+..-..... ++..|++|+++..-........|+ ++...|.-...+..+|.+.+-
T Consensus 96 ~t~Qt~GGTGAL~~~A~fl~~~~---------~~~~vwis~PtW~NH~~If~~aGl---~v~~Y~Yyd~~~~~~df~~ml 163 (396)
T COG1448 96 ATVQTLGGTGALRVAADFLARFF---------PDATVWISDPTWPNHKAIFEAAGL---EVETYPYYDAETKGLDFDGML 163 (396)
T ss_pred hheecCCcchHHHHHHHHHHHhC---------CCceEEeCCCCcHhHHHHHHhcCC---ceeeeeccccccccccHHHHH
Confidence 45678899988766654443321 667799999998887888888999 998888643334469999999
Q ss_pred HHHHHHHHCCCccEEEEeecCCcccccc---CCchHHHHHHHHhCceEEeeccccchhccCccc----hhhhcCCCCCCc
Q 038818 219 AAIDLDIQAGLIPLFLCATVGTTAITTV---DPLGPLCDIAKRYSIWVHVDAAYAGSACICPEF----RHFIDGIEGADS 291 (486)
Q Consensus 219 ~~l~~~~~~g~~p~~vv~~~gtt~~G~i---dpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~----~~~~~~~~~aDs 291 (486)
..|+...+. -+++.=.+++||||.- +..++|.++.++.|..-.+|-||-|+.-..++- |...... .-=.
T Consensus 164 a~L~~a~~~---~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~-~~~l 239 (396)
T COG1448 164 ADLKTAPEG---SVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVG-PELL 239 (396)
T ss_pred HHHHhCCCC---CEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhC-CcEE
Confidence 888875432 2334445679999954 457899999999999999999997765433321 1111111 1146
Q ss_pred eeeccccccCCCC-cceE--EEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHH------HHH
Q 038818 292 FSLNAHKWFFTTL-DCCC--LWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWL------VLR 362 (486)
Q Consensus 292 i~~~~hK~l~~p~-~~g~--~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~------~l~ 362 (486)
++.|+.|.|+.=. -.|. ++..+.+...+.++.-..-+....+ -. +....++.. .|+
T Consensus 240 va~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~yS------------nP---P~~Ga~vva~IL~~p~Lr 304 (396)
T COG1448 240 VASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYS------------NP---PAHGAAVVATILNNPELR 304 (396)
T ss_pred EEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccC------------CC---chhhHHHHHHHhCCHHHH
Confidence 7888899887321 1333 3334544443333221111111100 00 001111111 244
Q ss_pred HhchHHHHHHHHHHHHHHHHHHHHHhCC-C--CeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcC
Q 038818 363 SFGVANLRNFLRSHVRMAQLFQELVGGD-N--RFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASG 439 (486)
Q Consensus 363 ~~g~~g~~~~~~~~~~~a~~l~~~L~~~-~--~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 439 (486)
.....-+..+.++..++++.|.+.|++. + .|..+ ..+.++++|.-.. .+...++++ +.|
T Consensus 305 a~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i-~~Q~GMFsy~Gls--------------~~QV~rLre---e~~ 366 (396)
T COG1448 305 AEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFI-ISQRGMFSYTGLS--------------PEQVDRLRE---EFG 366 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchH-hhcCceeecCCCC--------------HHHHHHHHH---hcc
Confidence 4445567788899999999999999873 2 35554 3455777775221 222233443 346
Q ss_pred cEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 440 QLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 440 ~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
+..+..+ |+++. ..++..|+.+.++|.++
T Consensus 367 IY~v~sG--------Ri~va--Gl~~~ni~~va~ai~~v 395 (396)
T COG1448 367 IYLVASG--------RINVA--GLNTSNIDYVAKAIAAV 395 (396)
T ss_pred EEEecCC--------eeeec--cCChhhHHHHHHHHHhh
Confidence 5433322 89985 44666899999998765
No 383
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.85 E-value=1.6e-06 Score=81.71 Aligned_cols=332 Identities=17% Similarity=0.175 Sum_probs=178.4
Q ss_pred CCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEc--CCchHHHHHHHHHHHHHHHHHccccCCCCeEEEe
Q 038818 100 VVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQ--GTTCEAILCTLAAARDQILNEIGRENISRLVVYG 177 (486)
Q Consensus 100 ~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t--~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~ 177 (486)
...-.|..+...-.|... +.+.||+.-. +-| +-|.|.++..+..-.. +..++.+..+
T Consensus 70 ~GDEAYagsrs~~~L~~a----vkdifGfq~~---------iPthQGRgAE~Il~~i~ik~~--------~~~pg~~~~~ 128 (471)
T COG3033 70 RGDEAYAGSRSYYALADA----VKDIFGFQYT---------IPTHQGRGAENILIPILIKKG--------EQEPGSKMVA 128 (471)
T ss_pred ccchhhcccccHHHHHHH----HHHhcCceee---------eeccCCccHHHHHHHHHhhhc--------cccCCccccc
Confidence 334466777766666655 4566676421 222 2234555444332111 0114444555
Q ss_pred cCCCchHHHHH-HHHcCCCCCCeEEEecCCCC--------CcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc---c
Q 038818 178 SDQTHSALQKA-AQIAGIDPKNFRAIKTTKSS--------SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT---T 245 (486)
Q Consensus 178 s~~~H~s~~~a-~~~~G~g~~~v~~v~~d~~~--------~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G---~ 245 (486)
....|+--.++ .+..|. .++-+++++.. .|.+|++.|+++|++.-. ..+|.++.....++..| +
T Consensus 129 ~sN~~FdTTr~h~~~ng~---~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~-~nvp~I~~tiT~NsagGQpVS 204 (471)
T COG3033 129 FSNYHFDTTRGHIQINGA---TPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGA-DNVPYIVLTITNNSAGGQPVS 204 (471)
T ss_pred cccceecchhHHHHhcCC---ccccccccccccccccCCCCCccCHHHHHHHHHHhCc-ccCcEEEEEEeccccCCCcch
Confidence 56778765444 455566 55656655421 368999999999998643 33565444444555555 3
Q ss_pred cCCchHHHHHHHHhCceEEeeccccc-hhccC----ccchhh-h-----cCCCCCCceeeccccccCCCCcceEEEeeCc
Q 038818 246 VDPLGPLCDIAKRYSIWVHVDAAYAG-SACIC----PEFRHF-I-----DGIEGADSFSLNAHKWFFTTLDCCCLWVKNP 314 (486)
Q Consensus 246 idpl~~I~~i~~~~g~~lhvD~a~g~-~~~~~----~~~~~~-~-----~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~ 314 (486)
++.++++.+||++|++.++.|+|.-+ .+.+. +.+++. + .-++.+|-++.|+-|=..++. .|++.++|+
T Consensus 205 m~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnm-GGfl~~~D~ 283 (471)
T COG3033 205 MANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNM-GGFLCFKDD 283 (471)
T ss_pred HHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceecc-ccEEEecCc
Confidence 57899999999999999999997532 22332 222211 1 114579999999999998887 478888888
Q ss_pred hHH---HHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHH-HHHHHHHHHHHHHHHHHHhCC
Q 038818 315 NAL---IKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANL-RNFLRSHVRMAQLFQELVGGD 390 (486)
Q Consensus 315 ~~~---~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~-~~~~~~~~~~a~~l~~~L~~~ 390 (486)
..+ ..+.... +.. .+...++. -.||...++ ...|+ ++. ...+++.....+||.+.|.+.
T Consensus 284 ~~fDvy~~~~~~~---V~~-----eG~~tYGg---l~Grdmeal--AvGL~----e~~~~~yl~~Rv~Qv~YL~~~l~~~ 346 (471)
T COG3033 284 SFFDVYEECRTLV---VVQ-----EGFPTYGG---LAGRDMEAL--AVGLR----EGVNFDYLAHRVAQVQYLADGLEEA 346 (471)
T ss_pred cHHHHHHHHHhhe---Eee-----ccccccCc---ccchhHHHH--HHHHH----HhcCcHHHHHHHHHHHHHHHHHHhc
Confidence 532 2111111 111 11111211 112222222 22232 221 234556666778999999887
Q ss_pred CCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeE------C-------CEeEEEEE
Q 038818 391 NRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMV------A-------GIYFIRFA 457 (486)
Q Consensus 391 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~------~-------~~~~lR~~ 457 (486)
|+.++.|...+-+.......-...+. +.-....+.-+| ..+.|+=.+.-+.+ + .-..+|+.
T Consensus 347 -GVpi~~paGGHavfvda~~~lphip~--eqFpaqala~el---y~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRlt 420 (471)
T COG3033 347 -GVPIVQPAGGHAVFVDAGKFLPHIPA--EQFPAQALACEL---YKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLT 420 (471)
T ss_pred -CCeeEecCCCceEEeehhhhcCCCCh--hhCcHHHHHHHH---HHHhCeeeeeeeceecccCCCccccCCCchheeeEe
Confidence 88887665544443322111000000 000011222222 23445422211111 0 12579999
Q ss_pred ecCCCCcHHHHHHHHHHHHHHHH
Q 038818 458 VGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 458 ~~~~~tt~~did~~i~~l~~~~~ 480 (486)
+--..-|.+++|.++++++++.+
T Consensus 421 ipRrtYt~~HmD~V~~a~~~l~e 443 (471)
T COG3033 421 IPRRTYTQTHMDFVIEAFKALKE 443 (471)
T ss_pred ccccccchhHHHHHHHHHHHHHh
Confidence 84334467899999999998765
No 384
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.79 E-value=1.1e-06 Score=88.38 Aligned_cols=361 Identities=14% Similarity=0.107 Sum_probs=201.4
Q ss_pred hhHHhhcCCCCCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCcce--ecCCCCCHHHHHHHHHHhh-----cCCCcccccc
Q 038818 35 PGYLRKRLPESAPYNPEPIETILQDVQQHIVPGITHWQSPYYFA--YFPSSGSIAGFLGEMLSSG-----FNVVGFNWMS 107 (486)
Q Consensus 35 p~~~~~~~~~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~~~~l~~~-----~n~~~~~~~~ 107 (486)
|+.++..-++.+| .|..+.+.++.+.....++. -|. .|.| |..+ ..++.+...++..- +.++....++
T Consensus 85 P~~Ir~~~~l~~~-~~~~E~eml~~l~~ia~kNk-~~k--sfIGmGYyn~-~vP~~I~RNilenp~W~TqYTPYQ~EIsQ 159 (1001)
T KOG2040|consen 85 PKSIRLKRPLKMD-KPLCESEMLQHLEDIASKNK-IWK--SFIGMGYYNT-HVPAVILRNILENPGWYTQYTPYQAEISQ 159 (1001)
T ss_pred chhhcccchhcCC-CCcCHHHHHHHHHHHHhhhh-HHH--Hhhccccccc-cCcHHHHHHhhhCCcceeccCCCchhhhh
Confidence 4555555555664 56899999999998765554 343 3544 4432 33444444444321 1222222233
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHH-HHHHHHHHccccCCCCeEEEecCCCchHHH
Q 038818 108 SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAA-ARDQILNEIGRENISRLVVYGSDQTHSALQ 186 (486)
Q Consensus 108 ~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~-a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 186 (486)
+..-..+-.+ .+++++.|+|-+ +..+..-||.|. .|+.+ .+.. ++...+++...|+-..
T Consensus 160 GRLEsllNyQ--Tmi~dlTGL~~a-------NASLLDEgTAaa-EAm~l~~~~~----------krkk~vvd~~~hpqtl 219 (1001)
T KOG2040|consen 160 GRLESLLNYQ--TMITDLTGLPMA-------NASLLDEGTAAA-EAMALCNRIN----------KRKKFVVDSNCHPQTL 219 (1001)
T ss_pred hhHHHHhhhH--HhhhhccCCccc-------chhhhccchhHH-HHHHHHHhhc----------ccceEEecCCCCcchh
Confidence 4333333334 678999999876 566666677555 33333 2222 3334777888997644
Q ss_pred HHHH----HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCce
Q 038818 187 KAAQ----IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIW 262 (486)
Q Consensus 187 ~a~~----~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~ 262 (486)
..++ .+|+ ++... |++..-... + ....|++..+.| .|.+.|.+++++.+++.|..
T Consensus 220 sV~~TRa~~~~i---~v~~~----------~~~~~~~s~-~------~v~gvlvQYP~t-~G~i~d~~el~~~a~~~~s~ 278 (1001)
T KOG2040|consen 220 SVVKTRAKGFGI---KVVVS----------DIKEADYSS-K------DVSGVLVQYPDT-EGSVLDFDELVELAHANGSL 278 (1001)
T ss_pred hhhhccccccce---eEEec----------CHHHhhccc-c------ceeEEEEEcCCC-CCcccCHHHHHHHhhccCce
Confidence 4433 3333 32222 222211111 1 123466666666 59999999999999999988
Q ss_pred EEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcc-----eEEEeeCchHHHHHhcCCcccccCccCCCCC
Q 038818 263 VHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDC-----CCLWVKNPNALIKALSTNPEFLRNKASDSKQ 337 (486)
Q Consensus 263 lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~-----g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 337 (486)
+++-.-.-+..++-|... =+||....+.+.+ ++|.|- |++.+++. ..+..|+.+.+...+..+
T Consensus 279 vv~atDLLaLtiLrpPge------fGaDIavGSsQRF-GVPlGYGGPHAaFfAv~~~-----l~R~mPGRiiGvtkD~~g 346 (1001)
T KOG2040|consen 279 VVMATDLLALTILRPPGE------FGADIAVGSSQRF-GVPLGYGGPHAAFFAVSES-----LVRMMPGRIIGVTKDALG 346 (1001)
T ss_pred EEEeehhhHHHccCChhh------cCceeeecccccc-CccccCCCchHHHHHHHHH-----HHhhCCCceEeeeecccc
Confidence 766332222222222211 1899999998886 456553 34444322 224455555443222111
Q ss_pred ccCCCCcccc----CCCCC-------CchHHHHHH-----HHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCe
Q 038818 338 VVDYKDWQIT----LSRRF-------RALKLWLVL-----RSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNF 401 (486)
Q Consensus 338 ~~~~~~~~~~----~sr~~-------~~l~~~~~l-----~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~ 401 (486)
...+. ..+| --||- .+-++.+.+ -++|.+|++++.++....+-.|...|+.. +-++.+.+.+
T Consensus 347 k~a~R-LALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~a-ghel~~k~fF 424 (1001)
T KOG2040|consen 347 KEAYR-LALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNA-GHELQHKPFF 424 (1001)
T ss_pred cHHHH-HHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhc-chhhcccccc
Confidence 11110 0111 12221 111222222 23599999999999999999999999876 6788877777
Q ss_pred eEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 402 AVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 402 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
-.+.+++... .+++.++..++++-+ . +-..+.+-+++ ...++++|+|.++..+.
T Consensus 425 DTLkI~~~~s----------------~~~~l~rA~~~~iNl---r-~~ed~tigvsl-DETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 425 DTLKIRCGCS----------------AEEVLDRAAKRQINL---R-LVEDGTIGVSL-DETVTEKDVDDLLWVFN 478 (1001)
T ss_pred ceEEEEecCc----------------HHHHHHHHHhhcCce---E-EeecCceEEee-cccccHHHHHHHHHHHc
Confidence 7777776542 234444444444311 1 11223456777 56888999999999886
No 385
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.72 E-value=2.3e-06 Score=82.04 Aligned_cols=305 Identities=14% Similarity=0.129 Sum_probs=160.1
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcc----ccCCCCeEEEecCCCchHHHHHHHHc
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIG----RENISRLVVYGSDQTHSALQKAAQIA 192 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~----~~~~~~~~v~~s~~~H~s~~~a~~~~ 192 (486)
++++.+++++|.+.+ ..++.+++|..+ +--..++.......+ |...++...+|+.+.+-.....++.+
T Consensus 73 e~r~l~a~llgv~~~-------~viv~gNSSL~l-M~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~ 144 (425)
T PF12897_consen 73 EARELFAELLGVPPE-------NVIVGGNSSLNL-MHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHF 144 (425)
T ss_dssp HHHHHHHHHHTS-GG-------GEEE-SS-HHHH-HHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHC
T ss_pred HHHHHHHHHhCCCHH-------HEEEeccchHHH-HHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhh
Confidence 456889999999986 556555555433 322233333222111 22346788899999999999999999
Q ss_pred CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHH-HHHhCceEEeecc
Q 038818 193 GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDI-AKRYSIWVHVDAA 268 (486)
Q Consensus 193 G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i-~~~~g~~lhvD~a 268 (486)
|+ +.+.||.+++ -.|+|.+|+++.++.. +--+-++---+||+|..-. +++++++ +...++.+..|-|
T Consensus 145 Gi---emi~VpM~~d---GPDmD~Ve~LV~~D~s---vKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNA 215 (425)
T PF12897_consen 145 GI---EMIPVPMTED---GPDMDMVEELVAEDPS---VKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNA 215 (425)
T ss_dssp T----EEEEEEEETT---EE-HHHHHHHTHTSTT---EEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-T
T ss_pred Cc---EEEecCCCCC---CCCHHHHHHHHhcCCc---cceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecC
Confidence 99 9999999864 5799999999976542 1123445557899998844 4555555 3467999999999
Q ss_pred ccchhccCcc--ch--hhhc-----CCCCCCceeeccccccCCCCcceEEEeeCchH--HHHHhcCCcccccCccCCCCC
Q 038818 269 YAGSACICPE--FR--HFID-----GIEGADSFSLNAHKWFFTTLDCCCLWVKNPNA--LIKALSTNPEFLRNKASDSKQ 337 (486)
Q Consensus 269 ~g~~~~~~~~--~~--~~~~-----~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~--~~~~~~~~~~y~~~~~~~~~~ 337 (486)
|+...+..+. .. ..+. |-+.--.+..|..|.-+...|.+++....... +.+.+... -+.
T Consensus 216 Y~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~~--tIg-------- 285 (425)
T PF12897_consen 216 YAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLSVQ--TIG-------- 285 (425)
T ss_dssp TTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHHH---S---------
T ss_pred ceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHHHHHHHHHhcCc--eeC--------
Confidence 9876653221 11 1111 21222255677899888777777777665422 22221110 010
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHhc-hH-HHHHHHHHHHH--------HHHHHHHHHh-CCCCeEEecCCCe-eEEE
Q 038818 338 VVDYKDWQITLSRRFRALKLWLVLRSFG-VA-NLRNFLRSHVR--------MAQLFQELVG-GDNRFEIVAPRNF-AVVC 405 (486)
Q Consensus 338 ~~~~~~~~~~~sr~~~~l~~~~~l~~~g-~~-g~~~~~~~~~~--------~a~~l~~~L~-~~~~~~~~~~~~~-~~v~ 405 (486)
..-+......+.++ .+ |++++++++.+ .-+.|.+.|. .. ++--+..|.. ..|+
T Consensus 286 --------------pdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~-~ia~Wt~P~GGYFIs 350 (425)
T PF12897_consen 286 --------------PDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGL-GIASWTKPKGGYFIS 350 (425)
T ss_dssp ----------------HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGG-TSEEE---SBSS-EE
T ss_pred --------------ccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCC-CeeEecCCCCceEEE
Confidence 11122222333332 34 66666665543 3445666676 43 4544555554 4677
Q ss_pred EEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEe-eeeE-----CCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 406 FRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVS-HGMV-----AGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 406 f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~~-----~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
|...+. ..+++.+...+.|+.... +..+ .....||++.+-| +.+|++..++.+.-++
T Consensus 351 ld~~~G---------------~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P--~leel~~Am~~~~~cv 413 (425)
T PF12897_consen 351 LDVLDG---------------TAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYP--SLEELETAMDVFATCV 413 (425)
T ss_dssp EEESTT----------------HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS---HHHHHHHHHHHHHHH
T ss_pred EecCCC---------------hHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCC--CHHHHHHHHHHHHHHH
Confidence 776642 256788888888985433 1111 1245799998644 6678999999988776
Q ss_pred H
Q 038818 480 D 480 (486)
Q Consensus 480 ~ 480 (486)
+
T Consensus 414 ~ 414 (425)
T PF12897_consen 414 K 414 (425)
T ss_dssp H
T ss_pred H
Confidence 4
No 386
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=98.67 E-value=6.2e-07 Score=80.81 Aligned_cols=232 Identities=14% Similarity=0.071 Sum_probs=140.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcC-CchHHHHHHHHHHHHHHHHHccccCCCC-eEEEecCCCchHHHHH
Q 038818 111 ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQG-TTCEAILCTLAAARDQILNEIGRENISR-LVVYGSDQTHSALQKA 188 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~-ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~a 188 (486)
...+-.+.....-+|.|+..-. ..++.+ ..-++.-.++...|.+. |+ ..|+-.....-|-.|.
T Consensus 55 l~~isne~a~~~i~l~glhav~------nc~vvpl~tgmslslc~~s~r~kr---------pkakyiiw~ridqks~~ks 119 (432)
T KOG3843|consen 55 LACISNEFAKDAIHLAGLHAVA------NCFVVPLATGMSLSLCFLSLRHKR---------PKAKYIIWLRIDQKSCFKS 119 (432)
T ss_pred HHHHHHHHHHHHHHHhhhhhhh------ceeEEeccccccHHHHHHHHhhcC---------CcccEEEEEecchHHHHHH
Confidence 3445555566666777765321 222222 22244545555555431 22 2334455666677777
Q ss_pred HHHcCCCCCCeEEEe-cCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc---ccCCchHHHHHHHHhCceEE
Q 038818 189 AQIAGIDPKNFRAIK-TTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT---TVDPLGPLCDIAKRYSIWVH 264 (486)
Q Consensus 189 ~~~~G~g~~~v~~v~-~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G---~idpl~~I~~i~~~~g~~lh 264 (486)
.-..|+ +.+.|. +-+.+....|++++++.+++.- . -++.+.+.||..- .-|.+++|+.||..|+++-+
T Consensus 120 i~~agf---epiiie~i~d~d~l~tdleav~~~iee~g---~--dcilci~sttscfapr~pd~leaiaaica~~diphi 191 (432)
T KOG3843|consen 120 IIHAGF---EPIIIENILDGDELITDLEAVEAIIEELG---E--DCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHI 191 (432)
T ss_pred HHhcCC---CceeeeccccchHHHHhHHHHHHHHHHhC---C--ceEEEEeecccccCCCCCchHHHHHHHHHccCchhh
Confidence 777888 766664 3222346779999999888753 2 2344445444433 34889999999999999999
Q ss_pred eeccccchhccCccchhh---hcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCC
Q 038818 265 VDAAYAGSACICPEFRHF---IDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDY 341 (486)
Q Consensus 265 vD~a~g~~~~~~~~~~~~---~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 341 (486)
|.-|||.-- .+.-++ ...+.++|.++-+..|.|.+|.|..++..-+...++..-. .|.....
T Consensus 192 vnnayglqs---ee~i~~iaa~~~~grida~vqsldknf~vpvggaiia~fk~n~iq~iak---~ypgras--------- 256 (432)
T KOG3843|consen 192 VNNAYGLQS---EECIHKIAAAAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQEIAK---MYPGRAS--------- 256 (432)
T ss_pred hccccccch---HHHHHHHHHHhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHHHHHH---hCCCccc---------
Confidence 999997532 121111 1235689999999999999998766654322222221111 1211100
Q ss_pred CCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhC
Q 038818 342 KDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGG 389 (486)
Q Consensus 342 ~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~ 389 (486)
....+.+...+..+|..++.+...+..++--+++..|.+
T Consensus 257 ---------a~ps~dllitll~~gqn~f~e~~~eqkemf~~l~~ki~~ 295 (432)
T KOG3843|consen 257 ---------ASPSLDLLITLLSLGQNAFKELFGEQKEMFLKLRNKIIK 295 (432)
T ss_pred ---------cCccHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 112356677888889999998888888877777776644
No 387
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.45 E-value=1.7e-07 Score=90.00 Aligned_cols=163 Identities=17% Similarity=0.110 Sum_probs=37.9
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCC------chHHHHHHH
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQT------HSALQKAAQ 190 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~------H~s~~~a~~ 190 (486)
.+.+.++.+.|.++ ++++++...|++.++..... +-.|++|.-. .+.+...++
T Consensus 51 ~v~~ll~~ltgAea---------A~VvNnnaAAv~L~l~~la~------------~~EvIvsRGelVeiGgsFRip~vm~ 109 (367)
T PF03841_consen 51 HVEELLCELTGAEA---------ALVVNNNAAAVLLALNTLAK------------GKEVIVSRGELVEIGGSFRIPDVMR 109 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccc---------cccccccccccccccccccc------------ccccccccccccccccccccccccc
Confidence 35567888988864 46666655566555544321 1123334322 233556667
Q ss_pred HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcc--cccc--CCchHHHHHHHHhCceEEee
Q 038818 191 IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTA--ITTV--DPLGPLCDIAKRYSIWVHVD 266 (486)
Q Consensus 191 ~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~--~G~i--dpl~~I~~i~~~~g~~lhvD 266 (486)
..|. .++.|-+.. +..+++.+++|.+++. ++.-.+.+|. .|.. -+++++++++++|++++++|
T Consensus 110 ~sGa---~lvEVGttN----~t~~~Dye~AI~e~Ta------~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~D 176 (367)
T PF03841_consen 110 QSGA---RLVEVGTTN----RTHLSDYEKAITENTA------ALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVD 176 (367)
T ss_dssp ----------------------------------------------------------------HHHHHHHHHT--EEEE
T ss_pred cccc---ccccccccc----cccccccccccccccc------ccccccccccccccccccccHHHHHHHHhhcCCcEEEE
Confidence 7787 888876532 6788999999999885 4555554444 2322 47999999999999999999
Q ss_pred ccccchhcc----CccchhhhcCC-CCCCceeeccccccCCCCcceEEEeeCc
Q 038818 267 AAYAGSACI----CPEFRHFIDGI-EGADSFSLNAHKWFFTTLDCCCLWVKNP 314 (486)
Q Consensus 267 ~a~g~~~~~----~~~~~~~~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~~~~ 314 (486)
.+-|...-+ .+.-......+ .++|.+++|+.|.+++|. +|+++-|.+
T Consensus 177 lgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ-aGiI~Gkk~ 228 (367)
T PF03841_consen 177 LGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ-AGIIVGKKE 228 (367)
T ss_dssp -TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S--EEEEEEHH
T ss_pred CCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCC-eEEEEeCHH
Confidence 877553211 11111111112 479999999999999996 677776654
No 388
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.35 E-value=0.00014 Score=69.63 Aligned_cols=242 Identities=12% Similarity=0.109 Sum_probs=127.1
Q ss_pred HHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCC
Q 038818 118 VMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPK 197 (486)
Q Consensus 118 ~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~ 197 (486)
+.+.+++.||.++... ..- ..+||.|+-.+|...... .+..++++...+-.+.+...+.|-+..
T Consensus 59 le~iyA~vfgaE~ALV-----Rpq-~vSGTHAi~~~Lfg~Lrp----------GD~ll~~tG~PYDTL~~VIG~~g~~~G 122 (403)
T PF06838_consen 59 LERIYADVFGAEDALV-----RPQ-FVSGTHAIALALFGVLRP----------GDELLSITGKPYDTLEEVIGIRGNGPG 122 (403)
T ss_dssp HHHHHHHHCT-SEEEE-----ETT-S-SHHHHHHHHHHHH--T----------T-EEEESSSS--CCHHHHHTSSSSSSS
T ss_pred HHHHHHHHhCchhhhh-----ccc-ccchHHHHHHHHHhcCCC----------CCeEEEcCCCchhhHHHHhCCCCCCCC
Confidence 3456799999876410 011 236788887777765542 334445677777778877755432111
Q ss_pred -------CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEee--cCCc--cccccCCchHHHHHHHHh--CceEE
Q 038818 198 -------NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCAT--VGTT--AITTVDPLGPLCDIAKRY--SIWVH 264 (486)
Q Consensus 198 -------~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~--~gtt--~~G~idpl~~I~~i~~~~--g~~lh 264 (486)
+...||..+ ++.+|.+.++++|++.++ +|.+. .|.+ ++-.++.|++++++.|+. ++++.
T Consensus 123 SL~e~Gi~Y~~v~L~~--dg~~D~~~i~~~~~~~tk------~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iif 194 (403)
T PF06838_consen 123 SLKEFGIKYREVPLTE--DGTIDWEAIKKALKPNTK------MVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIF 194 (403)
T ss_dssp STGGGT-EEEE--B-T--TSSB-HHHHHHHHHTTEE------EEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEE
T ss_pred ChHHhCceeEEEeecC--CCCcCHHHHHHhhccCce------EEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEE
Confidence 456788875 569999999999996553 34432 2322 334567888888888876 58999
Q ss_pred eeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHH-hcCCcccccCccCCCCCccCCC
Q 038818 265 VDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKA-LSTNPEFLRNKASDSKQVVDYK 342 (486)
Q Consensus 265 vD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~-~~~~~~y~~~~~~~~~~~~~~~ 342 (486)
||-|||-+.-..+. .. -+||.+..|.=|..++. ..+|..++-++++..++ .+..++-+..
T Consensus 195 VDNCYGEFvE~~EP-~~-----vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPGiG~------------ 256 (403)
T PF06838_consen 195 VDNCYGEFVETQEP-TE-----VGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPGIGK------------ 256 (403)
T ss_dssp EE-TTTTTTSSS-G-GG-----GT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TTTGG------------
T ss_pred EeCCcceeccccCc-cc-----cchhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCcccc------------
Confidence 99999875432221 22 18999999999988844 35777777777665432 2223333322
Q ss_pred CccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC---Cee-EEEEEeec
Q 038818 343 DWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR---NFA-VVCFRVLP 410 (486)
Q Consensus 343 ~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~---~~~-~v~f~~~~ 410 (486)
+++-.+...... ++ |.---..++.+..+-+......++++ |+++...+ ++- +-++.+..
T Consensus 257 ----e~G~t~~~~R~~--~Q--GlFlAP~vV~eAlKgaif~A~~fe~l-G~~v~P~~~~~R~DiIQai~l~~ 319 (403)
T PF06838_consen 257 ----EVGATLGTNRLM--FQ--GLFLAPHVVGEALKGAIFAAALFEKL-GFEVSPKPDDPRSDIIQAIELGS 319 (403)
T ss_dssp ----GSS--TTTHHHH--HH--HHHHHHHHHHHHHHHHHHHHHHHHHT-T-EEES-TTS--SSS-EEEE-SS
T ss_pred ----ccccCcchHHHH--Hh--HHhhchHHHHHHHHHHHHHHHHHHHc-CCcCCCCCCCCCCceEEEEECCC
Confidence 222222211110 00 11111334455566666677777777 89987532 333 33555543
No 389
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=98.20 E-value=0.00044 Score=63.47 Aligned_cols=344 Identities=14% Similarity=0.066 Sum_probs=189.6
Q ss_pred ceecCCCC-CHHHHHHHHHHhhcCCCcccc---cc---ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHH
Q 038818 77 FAYFPSSG-SIAGFLGEMLSSGFNVVGFNW---MS---SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEA 149 (486)
Q Consensus 77 ~~~~~~~~-~~~~~~~~~l~~~~n~~~~~~---~~---~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a 149 (486)
..|-+++. .+-+++-++-...+|-++... +. +.-+..+-......+.+|++.|+.+ .-.++.+|||..
T Consensus 9 vnFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~-----~vlf~QGGGt~q 83 (370)
T KOG2790|consen 9 VNFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNY-----KVLFLQGGGTGQ 83 (370)
T ss_pred eecCCCcccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCce-----eEEEEeCCCccc
Confidence 33444443 344566666666666554322 22 3335566677889999999999986 234556777743
Q ss_pred HHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCc-ccCHHHHHHHHHHHHHCC
Q 038818 150 ILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSF-TLTPESLQAAIDLDIQAG 228 (486)
Q Consensus 150 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~-~~d~~~L~~~l~~~~~~g 228 (486)
. .|+..-... ...|..-+-|++..-+--+...+-++.-. +.+..+..+..-+ ..|.+.++.-. +.
T Consensus 84 F-aAv~lNL~g-----lK~g~~AdYiVTGsWS~KA~~EAkk~~~~---~~V~~~~k~y~ygkvPd~~~w~~~~--da--- 149 (370)
T KOG2790|consen 84 F-AAVPLNLIG-----LKHGRCADYVVTGSWSAKAAEEAKKYGTP---NIVIPKLKSYTYGKVPDPSTWELNP--DA--- 149 (370)
T ss_pred c-cccchhhhc-----cccCCccceEEeccccHHHHHHHHhhCCc---eEEeccccccccCcCCChhhcccCC--Cc---
Confidence 2 332211100 11222344565554344444555444333 4444443321111 34666665322 21
Q ss_pred CccEEEEeecCCcccccc-CCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcce
Q 038818 229 LIPLFLCATVGTTAITTV-DPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCC 307 (486)
Q Consensus 229 ~~p~~vv~~~gtt~~G~i-dpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g 307 (486)
.+|-.+...|..|.- +++. +-.-+|..++.|-+.-. + +.. -++...+.|...++|..+ |.|..
T Consensus 150 ---~yvyyCaNETVHGVEf~~~P----~~~~~~~vlVaDmSSnf--l-Srp-----vDvsk~gvi~aGAQKN~G-~aG~T 213 (370)
T KOG2790|consen 150 ---SYVYYCANETVHGVEFDFIP----VNDPKGAVLVADMSSNF--L-SRP-----VDVSKFGVIFAGAQKNVG-PAGVT 213 (370)
T ss_pred ---cEEEEecCceeeceecCCCC----CCCCCCceEEEecccch--h-cCC-----ccchhcceEEeccccccC-ccccE
Confidence 278889999999975 4443 22345788888854311 1 111 123466788999999876 66778
Q ss_pred EEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC-CCchHHHHHHHHh-chHHHHHHHHHHHHHHHHHHH
Q 038818 308 CLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR-FRALKLWLVLRSF-GVANLRNFLRSHVRMAQLFQE 385 (486)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~ 385 (486)
++++|+.- +.+.....|.-+.-.. .. .+.++-.+-+ |....+-+.++.+ ...|+..+.+...+.++.+.+
T Consensus 214 vvivr~dl-lg~~~~~tP~v~dyk~-----~~--~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd 285 (370)
T KOG2790|consen 214 VVIVRKDL-LGNALDITPSVLDYKI-----MD--KNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYD 285 (370)
T ss_pred EEEEehhh-hcccccCCccccceee-----ec--cccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 88888753 2223233332111000 00 0001111111 2222333344443 335677788888899999999
Q ss_pred HHhCCCCeEEec-CCC---eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCC
Q 038818 386 LVGGDNRFEIVA-PRN---FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGAT 461 (486)
Q Consensus 386 ~L~~~~~~~~~~-~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~ 461 (486)
.|.+..||-... +|. .-.|+|++.+ +++..++.+...+++-+.+.+ ++..+.+|.|+-|
T Consensus 286 ~iD~s~gfy~cpVe~~~RS~MNV~Fri~~--------------d~Le~eFLkeA~~~~mv~LKG--hRSVGGiRASlYN- 348 (370)
T KOG2790|consen 286 AIDNSNGFYRCPVEPSVRSRMNVPFRIEK--------------DELEAEFLKEAAKEHMVQLKG--HRSVGGIRASLYN- 348 (370)
T ss_pred HHHhcCCeEEcccchhhhhhcccceeecc--------------hHHHHHHHHHHHHhhhhcccc--ccccccchhhhhc-
Confidence 999887886542 332 2458999985 345556666555555432222 3445679999966
Q ss_pred CCcHHHHHHHHHHHHHHHH
Q 038818 462 LTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 462 ~tt~~did~~i~~l~~~~~ 480 (486)
..+-+++.++++-+++..+
T Consensus 349 Aisv~~~q~L~~~m~~F~k 367 (370)
T KOG2790|consen 349 AISVEEVQKLAAFMKEFQK 367 (370)
T ss_pred cccHHHHHHHHHHHHHHHH
Confidence 5566799999999888764
No 390
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=97.88 E-value=0.0029 Score=58.63 Aligned_cols=301 Identities=10% Similarity=0.036 Sum_probs=161.2
Q ss_pred ceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHc------CCCCCC---eEEEecCC--C
Q 038818 139 GGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIA------GIDPKN---FRAIKTTK--S 207 (486)
Q Consensus 139 ~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~------G~g~~~---v~~v~~d~--~ 207 (486)
..+|+++|||||-.||..||+..- .+++|......|--+...+++. |-+..+ |+.-|+.. .
T Consensus 104 vc~F~NSGSEANDLALRLAR~ftk--------hqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyr 175 (452)
T KOG1403|consen 104 VCFFVNSGSEANDLALRLARNFTK--------HQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYR 175 (452)
T ss_pred EEEEecCCchhhHHHHHHHHhhcc--------cCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccc
Confidence 679999999999999999998631 4556665655554333333322 222222 33333321 0
Q ss_pred CC-----------cccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHHHHHHhCceEEeeccccch
Q 038818 208 SS-----------FTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCDIAKRYSIWVHVDAAYAGS 272 (486)
Q Consensus 208 ~~-----------~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~i~~~~g~~lhvD~a~g~~ 272 (486)
+. +..-.+.+++.+++...+|......++.+-.+--|.|-| ++++++..+.+|-.++.|..+-|+
T Consensus 176 GK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGF 255 (452)
T KOG1403|consen 176 GKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGF 255 (452)
T ss_pred cccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcc
Confidence 11 123346788888887777766555566655565677754 678888899999999999998775
Q ss_pred hccCccc-hhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcC-CcccccCccCCCCCccCCCCccccCCC
Q 038818 273 ACICPEF-RHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALST-NPEFLRNKASDSKQVVDYKDWQITLSR 350 (486)
Q Consensus 273 ~~~~~~~-~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~~~sr 350 (486)
......+ ....-+. --|.+++ .|-++-..+.+.+.++.+ +.++|.. .-.|...- ++.
T Consensus 256 GRvG~hyWafq~y~f-iPDIVtm--gKpmGNGhPVa~Vattke--IA~Af~atgv~YFNTy----------------GGn 314 (452)
T KOG1403|consen 256 GRVGSHYWAFQTYNF-IPDIVTM--GKPMGNGHPVAAVATTKE--IAQAFHATGVEYFNTY----------------GGN 314 (452)
T ss_pred cccchhhhhhhhhcc-ccchhee--cccCCCCCeeeEEeccHH--HHHHhccccceehhcc----------------CCC
Confidence 4332211 1111111 3455554 455554555666666554 2345543 23444221 121
Q ss_pred CCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEecCCCee--EEEEEeecCC-CCCCCCCCccchHH
Q 038818 351 RFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDN-RFEIVAPRNFA--VVCFRVLPSA-SGLGDGKANEGANE 426 (486)
Q Consensus 351 ~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~~~--~v~f~~~~~~-~~~~~~~~~~~~~~ 426 (486)
+.+-....+.|+....+. +.++..++.++|...|.+.. ..++++.-+.. .+.+.+..+. -|.++ .+
T Consensus 315 PVsCAv~laVm~v~e~E~---Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~-------tk 384 (452)
T KOG1403|consen 315 PVSCAVGLAVMRVCEDEN---LQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPD-------TK 384 (452)
T ss_pred chhHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccCCCc-------HH
Confidence 222222233444444444 44555666667766665432 35666554421 1222222221 12222 33
Q ss_pred HHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 427 LNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 427 ~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
.+..+..+|.+...+.++... .+++.|++-.- --.+++++++++..|++++.
T Consensus 385 ~A~~~v~rlke~y~VLlsaDG-Ph~NilKiKPP-mCFneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 385 EAHWVVNRLKELYRVLLSADG-PHRNILKIKPP-MCFNEENADEFVLGLDEILT 436 (452)
T ss_pred HHHHHHHHHHHhhhEEEecCC-CCCceeecCCC-cccChhhHHHHHHHHHHHHH
Confidence 445666677666544444321 22456665431 11256688888888888764
No 391
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=97.65 E-value=0.0071 Score=56.52 Aligned_cols=289 Identities=15% Similarity=0.175 Sum_probs=161.2
Q ss_pred cceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHH
Q 038818 138 GGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESL 217 (486)
Q Consensus 138 ~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L 217 (486)
..|+=+-|||-|+..+..-.-..+ .+..||+|.++.......+...|+- .+...+.=..++-.+|.+.+
T Consensus 100 v~~vQslsGTGAl~~~A~Fl~~~~---------~~~~VY~SnPTW~nH~~if~~aGf~--tv~~Y~yWd~~~k~~d~e~~ 168 (410)
T KOG1412|consen 100 VFGVQSLSGTGALRIAADFLATFY---------NKNTVYVSNPTWENHHAIFEKAGFT--TVATYPYWDAENKCVDLEGF 168 (410)
T ss_pred ccceeeccccchhhhhHHHHHHhc---------ccceeEecCCchhHHHHHHHHcCCc--eeeeeeeecCCCceecHHHH
Confidence 356777788888766544332221 4566999999988888888888842 33333332123458898888
Q ss_pred HHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHHHHHHhCceEEeeccccchhccCcc---c--hhhhcCCCC
Q 038818 218 QAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCDIAKRYSIWVHVDAAYAGSACICPE---F--RHFIDGIEG 288 (486)
Q Consensus 218 ~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~---~--~~~~~~~~~ 288 (486)
-..|+..... -++|.-.+..|||| +|| ..+|+++.++.+..-..|-||-|++-..+. + +.... .+
T Consensus 169 Lsdl~~APe~---si~iLhaCAhNPTG-mDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~--~g 242 (410)
T KOG1412|consen 169 LSDLESAPEG---SIIILHACAHNPTG-MDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVE--QG 242 (410)
T ss_pred HHHHhhCCCC---cEEeeeccccCCCC-CCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHh--cC
Confidence 8888765431 22333334488887 566 568999999999999999999876643322 1 11111 12
Q ss_pred C-CceeeccccccC--CCC-cceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCch-HHHH--HH
Q 038818 289 A-DSFSLNAHKWFF--TTL-DCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRAL-KLWL--VL 361 (486)
Q Consensus 289 a-Dsi~~~~hK~l~--~p~-~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l-~~~~--~l 361 (486)
. =+++-++.|.++ .+. ||=-+.++++.......+...--+... ++-.....++.. ++.. .+
T Consensus 243 ~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~------------~SNPPAyGArIV~kvL~tP~l 310 (410)
T KOG1412|consen 243 FELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSN------------WSNPPAYGARIVHKVLSTPEL 310 (410)
T ss_pred CeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhc------------cCCCcchhhHHHHHHhcCHHH
Confidence 2 256677788776 333 333345566544322211111011100 000000001110 0000 11
Q ss_pred HHhchHHHHHHHHHHHHHHHHHHHHHhCC--CC-eEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhc
Q 038818 362 RSFGVANLRNFLRSHVRMAQLFQELVGGD--NR-FEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINAS 438 (486)
Q Consensus 362 ~~~g~~g~~~~~~~~~~~a~~l~~~L~~~--~~-~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 438 (486)
+.--...++.+..+..+++..|++.|..+ || +.=+ -.+.++++|.-..+ .-.+.|.++
T Consensus 311 re~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI-~~QiGMFSyTGLtp------------------~qV~~li~~ 371 (410)
T KOG1412|consen 311 REQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHI-TQQIGMFSYTGLTP------------------AQVDHLIEN 371 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH-HhhccceeecCCCH------------------HHHHHHHHh
Confidence 21223456777788889999999999775 22 1100 13456777754332 224556666
Q ss_pred CcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 439 GQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 439 g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
..+++... =|+++...++ ..+|++.++|.+.++.+-
T Consensus 372 h~vyLl~~-------GRInisGLN~--~NveyVAkAIde~Vr~~~ 407 (410)
T KOG1412|consen 372 HKVYLLSD-------GRINISGLNM--KNVEYVAKAIDETVRAIK 407 (410)
T ss_pred ceEEEecC-------CcEeeecccc--ccHHHHHHHHHHHHHhhc
Confidence 66555432 1577754433 369999999999887664
No 392
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.11 E-value=0.037 Score=52.83 Aligned_cols=221 Identities=12% Similarity=0.065 Sum_probs=118.2
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeecCCcccc----ccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCC-C
Q 038818 213 TPESLQAAIDLDIQAGLIPLFLCATVGTTAIT----TVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGI-E 287 (486)
Q Consensus 213 d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G----~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~-~ 287 (486)
.++.+|++|.+-.++......+++.-..+.-| +-+=+..+.+||++||+-++||+++.|+..-..-|.+---.+ .
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~ 333 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDS 333 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCC
Confidence 56778888887765444444555554444444 345589999999999999999999866543222222211122 2
Q ss_pred CCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchH
Q 038818 288 GADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVA 367 (486)
Q Consensus 288 ~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~ 367 (486)
-.|.+|++ -|+.. .| ++ .+++ |....+|-. +..-+|-++..+-+-...+.+-.+
T Consensus 334 PpD~vTFS-KK~q~----gG-ff-h~~~-----frpn~pYri--------------fNTWmGdP~k~lll~~vv~~I~~~ 387 (484)
T KOG1405|consen 334 PPDVVTFS-KKFQT----GG-FF-HDEE-----FRPNEPYRI--------------FNTWMGDPSKNLLLEEVVQEIKRE 387 (484)
T ss_pred Cccceehh-hhhhc----Cc-cc-cCcc-----cCCCchHHH--------------hhhhcCChHHHHHHHHHHHHHhHH
Confidence 57888775 24332 23 22 2221 122222211 111123233333333334433333
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC----CCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEE
Q 038818 368 NLRNFLRSHVRMAQLFQELVGG----DNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYV 443 (486)
Q Consensus 368 g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 443 (486)
.+++++.....+|...|.+ .|+.---..-....+.+.+.. .....++...+.-+|+. +
T Consensus 388 ---~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps--------------~~~Rdk~i~~~~~nGv~-~ 449 (484)
T KOG1405|consen 388 ---DLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCPS--------------GSIRDKLILIARLNGVN-L 449 (484)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeCCC--------------hHHHHHHHHHHHHcCce-e
Confidence 4556666677777777654 343210001123344444433 34455677777777863 3
Q ss_pred eeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 444 SHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 444 ~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
++. |...+|+-.+ ..-++.+.+-+++.++++++.
T Consensus 450 GGC---g~~siRfRPs-Lvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 450 GGC---GDKSIRFRPS-LVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred ccc---ccceeeeccc-eeehhhhHHHHHHHHHHHhcc
Confidence 332 3345676553 344667999999999988764
No 393
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=96.92 E-value=0.018 Score=53.60 Aligned_cols=152 Identities=15% Similarity=0.164 Sum_probs=94.9
Q ss_pred HHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCC--
Q 038818 120 DWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPK-- 197 (486)
Q Consensus 120 ~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~-- 197 (486)
+-.++.||.+.... .--+. +||.|+-.||-...+. .+-.+++....+-.+.....+-|-|..
T Consensus 72 ~vyA~vf~aE~a~V-----Rpq~i-sGTHAI~~aLfg~LRp----------gDell~i~G~PYDTLeevIG~rg~~~gSL 135 (416)
T COG4100 72 RVYAQVFGAEAALV-----RPQII-SGTHAIACALFGILRP----------GDELLYITGSPYDTLEEVIGLRGEGQGSL 135 (416)
T ss_pred HHHHHHhcccccee-----eeeee-cchhHHHHHHHhccCC----------CCeEEEecCCcchhHHHHhccCCCCcccH
Confidence 34788888876531 12233 4577776665544331 334455666666666665544332111
Q ss_pred -----CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEe--ecC--CccccccCCchHHHHHHHHh--CceEEee
Q 038818 198 -----NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCA--TVG--TTAITTVDPLGPLCDIAKRY--SIWVHVD 266 (486)
Q Consensus 198 -----~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~--~~g--tt~~G~idpl~~I~~i~~~~--g~~lhvD 266 (486)
.-..||... +|.+|.+.++..+++.++ +|.. +.| .-++-.+++|+++..+.|+- ++.+.||
T Consensus 136 ~dfgi~Y~~v~Lt~--~gkiD~~~v~~~i~~~tk------li~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVD 207 (416)
T COG4100 136 KDFGIKYKAVPLTA--DGKIDIQAVKTAISDRTK------LIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVD 207 (416)
T ss_pred HHhCcceeeccccc--CCcccHHHHHHhcCccce------EEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEe
Confidence 345667664 569999999999998765 2222 222 23445678889999998886 5888999
Q ss_pred ccccchhccCccchhhhcCCCCCCceeeccccccC
Q 038818 267 AAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFF 301 (486)
Q Consensus 267 ~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~ 301 (486)
-|||-+.--.. ..+ -++|.+..|.-|.-+
T Consensus 208 NCYGEFvE~~E-Pt~-----vGaDliAGSLIKNpG 236 (416)
T COG4100 208 NCYGEFVEEKE-PTH-----VGADLIAGSLIKNPG 236 (416)
T ss_pred ccchhhhhccC-ccc-----cchhhhccceeeCCC
Confidence 99987542211 111 179999998888655
No 394
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=96.39 E-value=0.22 Score=47.92 Aligned_cols=294 Identities=14% Similarity=0.058 Sum_probs=134.4
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH-HH
Q 038818 111 ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK-AA 189 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~-a~ 189 (486)
..+||+++ +.|-++.|=-... .--++|.+|+|+-. .|+..|.... .....+...|+ +...+|+..+ ..
T Consensus 45 s~eL~~~I-r~LH~~VGNAvt~----gr~IV~GtGsTQL~-~AalyALSp~----~~~~~~p~~VV-a~aPYY~~Y~~qt 113 (363)
T PF04864_consen 45 SPELERQI-RRLHRVVGNAVTD----GRYIVFGTGSTQLF-NAALYALSPN----ASPSSSPASVV-AAAPYYSSYPEQT 113 (363)
T ss_dssp -HHHHHHH-HHHHHHH-SB--T----TSEEEEECHHHHHH-HHHHHHHCHH----T-TTSSSEEEE-E-SS--CHHHHHC
T ss_pred cHHHHHHH-HHHHHHhcccccc----CcEEEEcCCHHHHH-HHHHHhcCCC----CCCCCCCceeE-ecCCCccchHHHH
Confidence 35677654 5556666632110 01356666655544 4444433321 00011334444 5556666554 44
Q ss_pred HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccc
Q 038818 190 QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 190 ~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
.++.- ....+.-|.. .+. ..+ ...+++=++|.|+||.|.+.. .+++.-+..++-|-||
T Consensus 114 ~~f~s---~~y~w~Gda~-~~~----------~~~---~~~~~IElVTSPNNPDG~lr~-----~V~~g~~~k~I~D~AY 171 (363)
T PF04864_consen 114 DFFDS---RLYKWAGDAS-NFK----------NSD---NPSPYIELVTSPNNPDGQLRE-----AVLNGSSGKVIHDLAY 171 (363)
T ss_dssp CCT-B---TTEEEEEECC-CGT----------T-S----CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT
T ss_pred Hhccc---cCccccccHH-hhc----------cCC---CCCCeEEEEeCCCCCcccccc-----hhcCCCCcceeeeeee
Confidence 44433 4455554432 121 111 123677889999999997731 1224455677899888
Q ss_pred cchhccCccchhhhcCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccC
Q 038818 270 AGSACICPEFRHFIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITL 348 (486)
Q Consensus 270 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 348 (486)
-...+ .+. ..-..-|.+-++..|.=+ +..-.|..++||++..++.. .|+... ++..
T Consensus 172 YWPhy-----TpI-~~~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~----~y~~ln-------------TiGv 228 (363)
T PF04864_consen 172 YWPHY-----TPI-TAPADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMT----KYMELN-------------TIGV 228 (363)
T ss_dssp -STTT-----S----S-B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHH----HHHHHH-------------CSS-
T ss_pred ecccc-----ccc-CCCCCCceEEEEEecccCccccccceeeecCHHHHHHHH----HHHHHh-------------cccC
Confidence 55432 111 111256889999999766 55568999999998765543 344321 1222
Q ss_pred CCC--CCchHHHHHHHH-hchH-----HHHHHHHHHHHHHHHHHHHHhCCCCeEEecC-C------------CeeEEEEE
Q 038818 349 SRR--FRALKLWLVLRS-FGVA-----NLRNFLRSHVRMAQLFQELVGGDNRFEIVAP-R------------NFAVVCFR 407 (486)
Q Consensus 349 sr~--~~~l~~~~~l~~-~g~~-----g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~------------~~~~v~f~ 407 (486)
||- .+++++.-++.. ++.+ -+.--.+.+.+.-+.|++.+.+-..|.+..- | ......++
T Consensus 229 S~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlk 308 (363)
T PF04864_consen 229 SRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLK 308 (363)
T ss_dssp -HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEE
T ss_pred cHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEe
Confidence 221 244444433322 2221 1111223344455677888877667776421 1 11122334
Q ss_pred eecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeEC-CEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 408 VLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVA-GIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
+..++ ++.+ .+.|.+.|++--++..+. +..++|+|+.. +++|.|.+++.|..+
T Consensus 309 Ce~ee------------d~DC---~~~l~~~~I~tr~G~~fga~~ryVRlSml~---~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 309 CEREE------------DEDC---YAVLREAKIITRSGVLFGADSRYVRLSMLK---RDDDFDQLLERLSKL 362 (363)
T ss_dssp ESSCG------------GSSH---HHHHHCTTEEEEEGGGGTS-TTEEEEESSS----HHHHHHHHHHHHCC
T ss_pred cCCcc------------cccH---HHHHHhCCcccCCCCccCCCCCeEEEeccC---CHHHHHHHHHHHHhh
Confidence 43221 1112 333334455333333222 35689999843 666999999988754
No 395
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=94.60 E-value=0.21 Score=47.71 Aligned_cols=259 Identities=13% Similarity=0.152 Sum_probs=137.9
Q ss_pred CCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc---cC
Q 038818 171 SRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT---VD 247 (486)
Q Consensus 171 ~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~---id 247 (486)
+...||++.++.-...+.....|+ .+..+..-...+..+|.+.+-+.|.+... | -+++.=-+.+|+||. .+
T Consensus 145 ~~~~I~ip~PTWgNh~~if~~ag~---~~~~yrYyd~~t~gld~~g~ledl~~~p~-g--s~ilLhaCaHNPTGvDPt~e 218 (427)
T KOG1411|consen 145 PSRDIYIPDPTWGNHKNIFKDAGL---PVKFYRYYDPKTRGLDFKGMLEDLGEAPE-G--SIILLHACAHNPTGVDPTKE 218 (427)
T ss_pred cccceeecCCcccccCccccccCc---ceeeeeeccccccccchHHHHHHHhcCCC-C--cEEEeehhhcCCCCCCccHH
Confidence 566789998886666666677788 55444332223567888887776665432 2 133334456788873 23
Q ss_pred CchHHHHHHHHhCceEEeeccccchhccCcc-----chhhhcCCCCCC-ceeeccccccCCC-CcceE--EEeeCchHHH
Q 038818 248 PLGPLCDIAKRYSIWVHVDAAYAGSACICPE-----FRHFIDGIEGAD-SFSLNAHKWFFTT-LDCCC--LWVKNPNALI 318 (486)
Q Consensus 248 pl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~-----~~~~~~~~~~aD-si~~~~hK~l~~p-~~~g~--~~~~~~~~~~ 318 (486)
..++|.++.++.+..-..|.||-|+...... .|..+. .+-+ .++-+.-|.++.- --.|. +++++.+...
T Consensus 219 qw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~--~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~ 296 (427)
T KOG1411|consen 219 QWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVE--DGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAK 296 (427)
T ss_pred HHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHH--cCCceEeehhhhhhcchhhhccceeEEEecCHHHHH
Confidence 4788999999999999999999886543211 111111 0111 3455566766521 11233 4555554322
Q ss_pred HHhc-----CCcccccCccCCCCCccCCCCccccCCCCCC-chHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 038818 319 KALS-----TNPEFLRNKASDSKQVVDYKDWQITLSRRFR-ALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNR 392 (486)
Q Consensus 319 ~~~~-----~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~-~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~ 392 (486)
+.-+ ..|-|...+ +.++|=.. .+. -..|+.-...-...+.++.+.+++.|.+.|++. +
T Consensus 297 rV~SQlk~liRpmYSnPP--------------~hGArIv~~Il~-d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~-g 360 (427)
T KOG1411|consen 297 RVESQLKILIRPMYSNPP--------------LHGARIVATILS-DPDLKNQWLGEVKGMADRIISMRQQLFDALEKE-G 360 (427)
T ss_pred HHHHHHHHHhcccccCCC--------------ccchhhhhhccC-ChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcC-C
Confidence 2111 122222211 11111111 010 001111112345667888899999999999875 2
Q ss_pred eEE-e--cCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHH
Q 038818 393 FEI-V--APRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVI 469 (486)
Q Consensus 393 ~~~-~--~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did 469 (486)
-.. + -..+-+++||.-..+ +-.+.|..+..++++.. -|+|+... +...++
T Consensus 361 s~~~W~hI~~QIGMF~fTgl~p------------------eQv~~l~ke~~iYmT~d-------GRiS~aG~--ss~nV~ 413 (427)
T KOG1411|consen 361 SPGNWSHITKQIGMFCFTGLNP------------------EQVDWLTKEYHIYLTKD-------GRISMAGL--SSSNVP 413 (427)
T ss_pred CCccHHHHHHhhheeeecCCCH------------------HHHHHHHhhheeeeccC-------ceEeeccc--cccCCc
Confidence 211 1 023567889865532 22334444444454431 36887543 333688
Q ss_pred HHHHHHHHHHH
Q 038818 470 AAWKVVQEKLD 480 (486)
Q Consensus 470 ~~i~~l~~~~~ 480 (486)
++.++|..+..
T Consensus 414 yLa~aih~vtk 424 (427)
T KOG1411|consen 414 YLADAIHAVTK 424 (427)
T ss_pred ccchhhHhHhc
Confidence 88888776543
No 396
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=92.57 E-value=0.29 Score=42.08 Aligned_cols=63 Identities=6% Similarity=0.004 Sum_probs=45.3
Q ss_pred cccChhhHHHHHHHHHHHHHHcC--CCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCc
Q 038818 105 WMSSPAATELENIVMDWLGEMLK--LPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTH 182 (486)
Q Consensus 105 ~~~~~~~~~le~~~~~~l~~l~g--~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 182 (486)
|....+..++.+.+.+|+.+.+| .+.. ...+++|+|++.++..++.+..+ +++.|+++...+
T Consensus 88 Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~-----pd~Ivvt~Ga~~al~~l~~~l~d-----------pGD~VlVp~P~Y 151 (153)
T PLN02994 88 FQDYHGLANFRKAIANFMAEARGGRVKFD-----ADMIVLSAGATAANEIIMFCIAD-----------PGDAFLVPTPYY 151 (153)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCccc-----hhheEEcCCHHHHHHHHHHHHcC-----------CCCEEEEeCCCC
Confidence 33334567899999999999988 3221 12789999999988777666654 677788887665
Q ss_pred h
Q 038818 183 S 183 (486)
Q Consensus 183 ~ 183 (486)
.
T Consensus 152 ~ 152 (153)
T PLN02994 152 A 152 (153)
T ss_pred C
Confidence 3
No 397
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=78.08 E-value=49 Score=32.62 Aligned_cols=104 Identities=9% Similarity=0.071 Sum_probs=59.5
Q ss_pred ceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCch------HHHHHHHHcCCCCCCeEEEecCCCCCccc
Q 038818 139 GGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHS------ALQKAAQIAGIDPKNFRAIKTTKSSSFTL 212 (486)
Q Consensus 139 ~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~------s~~~a~~~~G~g~~~v~~v~~d~~~~~~~ 212 (486)
.++..|||-.+...+..+.... |. ++.+++-+.... -+.+.++.+|+ ..+.+.+
T Consensus 62 ~iV~lSGGkDSs~la~ll~~~~--------gl-~~l~vt~~~~~~~e~~~~n~~~~~~~lgv---d~~~i~~-------- 121 (343)
T TIGR03573 62 CIIGVSGGKDSTYQAHVLKKKL--------GL-NPLLVTVDPGWNTELGVKNLNNLIKKLGF---DLHTITI-------- 121 (343)
T ss_pred EEEECCCCHHHHHHHHHHHHHh--------CC-ceEEEEECCCCCCHHHHHHHHHHHHHcCC---CeEEEeC--------
Confidence 5788999999887654433221 11 222222222222 25666777888 7777755
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccc
Q 038818 213 TPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAG 271 (486)
Q Consensus 213 d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~ 271 (486)
|++.+...+.....+...|.. .........+.++|+++|+.+++.|..+.
T Consensus 122 d~~~~~~l~~~~~~~~~~pc~---------~c~~~~~~~l~~~A~~~gi~~Il~G~~~d 171 (343)
T TIGR03573 122 NPETFRKLQRAYFKKVGDPEW---------PQDHAIFASVYQVALKFNIPLIIWGENIA 171 (343)
T ss_pred CHHHHHHHHHHHHhccCCCch---------hhhhHHHHHHHHHHHHhCCCEEEeCCCHH
Confidence 445555544443332222221 11223356888999999999999986644
No 398
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=76.88 E-value=31 Score=32.94 Aligned_cols=140 Identities=14% Similarity=0.111 Sum_probs=78.2
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCC-ch-
Q 038818 106 MSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQT-HS- 183 (486)
Q Consensus 106 ~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~-H~- 183 (486)
..+.....+|.-+-+.+.+ .. .-++|-||.+||.....++..+.+ | =+.+.++-... -|
T Consensus 44 ~gGNK~RKLefll~eal~~------g~------dTlvT~GgiQSNh~r~tAavA~~l---G----l~~v~ile~~~~~y~ 104 (323)
T COG2515 44 FGGNKIRKLEFLLGEALRK------GA------DTLVTYGGIQSNHVRQTAAVAAKL---G----LKCVLILENIEANYL 104 (323)
T ss_pred cCccHHHHHHHHHhhhhhc------CC------cEEEEecccchhHHHHHHHHHHhc---C----CcEEEEEeccccccc
Confidence 3444456666554343333 21 568999999999877666655432 1 13344433322 00
Q ss_pred --HHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc---CCchHHHHHHHH
Q 038818 184 --ALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV---DPLGPLCDIAKR 258 (486)
Q Consensus 184 --s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i---dpl~~I~~i~~~ 258 (486)
...--...+|. +++.++... +..++ ..++...++.+++|.+|. |+...|.++.|.. .=..||.+-+++
T Consensus 105 ~ngn~Ll~~l~G~---~~~~~~~~~--d~~~~-~~~~~~~e~~~~~g~kpy-vIp~GG~~~~g~lGyv~~a~Ei~~Q~~~ 177 (323)
T COG2515 105 LNGNLLLSKLMGA---EVRAVDAGT--DIGIN-ASAEELAEEVRKQGGKPY-VIPEGGSSPLGALGYVRLALEIAEQAEQ 177 (323)
T ss_pred cccchhhhhhcCc---eEEEecCCC--Chhhc-hhhHHHHHHHHhcCCCCc-EeccCCcCccccccHHHHHHHHHHHHhh
Confidence 02223356677 888877543 33222 233444445556688885 7777778886555 555677777776
Q ss_pred -hCceEEeeccccc
Q 038818 259 -YSIWVHVDAAYAG 271 (486)
Q Consensus 259 -~g~~lhvD~a~g~ 271 (486)
..+-.+|.++-++
T Consensus 178 ~~~fD~vVva~gs~ 191 (323)
T COG2515 178 LLKFDSVVVAPGSG 191 (323)
T ss_pred ccCCCEEEEeCCCc
Confidence 4555566655443
No 399
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=69.90 E-value=70 Score=29.22 Aligned_cols=67 Identities=16% Similarity=0.137 Sum_probs=37.1
Q ss_pred HHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC---CchHHHHHHHHhC
Q 038818 184 ALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD---PLGPLCDIAKRYS 260 (486)
Q Consensus 184 s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id---pl~~I~~i~~~~g 260 (486)
...+.|+.+|+ .++.++++.. .....+.|..++.+..+.|.. .+ . +|.+. +-..+-++|.+.|
T Consensus 47 ~~~~~A~~lgi---p~~~i~~~~~--~~~~~~~l~~~l~~~~~~g~~-~v---v-----~G~i~sd~~~~~~e~v~~~~g 112 (218)
T TIGR03679 47 LTRLQAEALGI---PLVKIETSGE--KEKEVEDLKGALKELKREGVE-GI---V-----TGAIASRYQKSRIERICEELG 112 (218)
T ss_pred HHHHHHHHhCC---CEEEEECCCC--ChHHHHHHHHHHHHHHHcCCC-EE---E-----ECCcccHhHHHHHHHHHHhCC
Confidence 45677888899 7777776521 123455677777665554422 11 1 23332 3344556776666
Q ss_pred ceEE
Q 038818 261 IWVH 264 (486)
Q Consensus 261 ~~lh 264 (486)
+.++
T Consensus 113 l~~~ 116 (218)
T TIGR03679 113 LKVF 116 (218)
T ss_pred CeEE
Confidence 5543
No 400
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=68.12 E-value=16 Score=32.57 Aligned_cols=53 Identities=11% Similarity=-0.039 Sum_probs=41.9
Q ss_pred HHHHHHHHHHH-H-CCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeec
Q 038818 215 ESLQAAIDLDI-Q-AGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDA 267 (486)
Q Consensus 215 ~~L~~~l~~~~-~-~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~ 267 (486)
++|..+++.-. + ....-++|++|=|.+..|.++|++.-+++++++|+.+|.=+
T Consensus 95 dAi~~av~rl~~~~~a~~kvvILLTDG~n~~~~i~P~~aAa~lA~~~gV~iytIg 149 (191)
T cd01455 95 EATEFAIKELAAKEDFDEAIVIVLSDANLERYGIQPKKLADALAREPNVNAFVIF 149 (191)
T ss_pred HHHHHHHHHHHhcCcCCCcEEEEEeCCCcCCCCCChHHHHHHHHHhCCCEEEEEE
Confidence 88888887754 2 22234678888899889999999988999999999998744
No 401
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=67.17 E-value=54 Score=32.94 Aligned_cols=83 Identities=19% Similarity=0.235 Sum_probs=55.2
Q ss_pred CCeEEEecCCCchH-HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCc--------
Q 038818 171 SRLVVYGSDQTHSA-LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTT-------- 241 (486)
Q Consensus 171 ~~~~v~~s~~~H~s-~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt-------- 241 (486)
.+.++|+|...-.. +.--++.+|+..+++...+ ..|++++.+.++.. .|.++++.+..|
T Consensus 120 ~~~vLYVsGEES~~QiklRA~RL~~~~~~l~l~a-------Et~~e~I~~~l~~~-----~p~lvVIDSIQT~~s~~~~S 187 (456)
T COG1066 120 RGKVLYVSGEESLQQIKLRADRLGLPTNNLYLLA-------ETNLEDIIAELEQE-----KPDLVVIDSIQTLYSEEITS 187 (456)
T ss_pred cCcEEEEeCCcCHHHHHHHHHHhCCCccceEEeh-------hcCHHHHHHHHHhc-----CCCEEEEeccceeecccccC
Confidence 34789998666554 4445788898665555443 45889999888763 366666655333
Q ss_pred cccccCCc----hHHHHHHHHhCceEEe
Q 038818 242 AITTVDPL----GPLCDIAKRYSIWVHV 265 (486)
Q Consensus 242 ~~G~idpl----~~I~~i~~~~g~~lhv 265 (486)
..|++.-+ .++.++||++|+++..
T Consensus 188 apGsVsQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 188 APGSVSQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred CCCcHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 23655444 4677799999998844
No 402
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=65.96 E-value=1e+02 Score=27.63 Aligned_cols=103 Identities=13% Similarity=0.129 Sum_probs=54.0
Q ss_pred eEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEe-cCC---------CchHHHHHHHHcCCCCCCeEEEecCCCCC
Q 038818 140 GVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYG-SDQ---------THSALQKAAQIAGIDPKNFRAIKTTKSSS 209 (486)
Q Consensus 140 ~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~---------~H~s~~~a~~~~G~g~~~v~~v~~d~~~~ 209 (486)
.+..|||..+.+.+..+... |.+ .-.++.. +.. .+....+.|+.+|+ .++.++++.+.
T Consensus 3 ~v~~SGGkDS~~al~~a~~~------G~~--v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgi---pl~~i~~~~~~- 70 (194)
T cd01994 3 VALISGGKDSCYALYRALEE------GHE--VVALLNLTPEEGSSMMYHTVNHELLELQAEAMGI---PLIRIEISGEE- 70 (194)
T ss_pred EEEecCCHHHHHHHHHHHHc------CCE--EEEEEEEecCCCCcccccccCHHHHHHHHHHcCC---cEEEEeCCCCc-
Confidence 46789999999765554432 110 0111111 111 11235667888899 77777764311
Q ss_pred cccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHHHhCceEE
Q 038818 210 FTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAKRYSIWVH 264 (486)
Q Consensus 210 ~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~~~g~~lh 264 (486)
.--.+.|.+.|.+..++|. .. | .+|.++. -.-+-++|++.|+..+
T Consensus 71 -e~~~~~l~~~l~~~~~~g~-~~-v-------v~G~i~sd~~~~~~e~~~~~~gl~~~ 118 (194)
T cd01994 71 -EDEVEDLKELLRKLKEEGV-DA-V-------VFGAILSEYQRTRVERVCERLGLEPL 118 (194)
T ss_pred -hHHHHHHHHHHHHHHHcCC-CE-E-------EECccccHHHHHHHHHHHHHcCCEEE
Confidence 1123666666666544332 11 1 1455532 3566678888877654
No 403
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=62.85 E-value=29 Score=30.46 Aligned_cols=70 Identities=16% Similarity=0.302 Sum_probs=43.9
Q ss_pred CeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchH
Q 038818 172 RLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGP 251 (486)
Q Consensus 172 ~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~ 251 (486)
+..++......+.+.....++|+ ++...+.+ +.++++..|.+..+.|... |+... -
T Consensus 79 ~Iavv~~~~~~~~~~~~~~ll~~---~i~~~~~~-------~~~e~~~~i~~~~~~G~~v--iVGg~------------~ 134 (176)
T PF06506_consen 79 KIAVVGYPNIIPGLESIEELLGV---DIKIYPYD-------SEEEIEAAIKQAKAEGVDV--IVGGG------------V 134 (176)
T ss_dssp EEEEEEESS-SCCHHHHHHHHT----EEEEEEES-------SHHHHHHHHHHHHHTT--E--EEESH------------H
T ss_pred cEEEEecccccHHHHHHHHHhCC---ceEEEEEC-------CHHHHHHHHHHHHHcCCcE--EECCH------------H
Confidence 33333333344558888899999 88888875 5778888888887777322 22211 1
Q ss_pred HHHHHHHhCceEEe
Q 038818 252 LCDIAKRYSIWVHV 265 (486)
Q Consensus 252 I~~i~~~~g~~lhv 265 (486)
..++|+++|+..+.
T Consensus 135 ~~~~A~~~gl~~v~ 148 (176)
T PF06506_consen 135 VCRLARKLGLPGVL 148 (176)
T ss_dssp HHHHHHHTTSEEEE
T ss_pred HHHHHHHcCCcEEE
Confidence 37888999976543
No 404
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=62.31 E-value=67 Score=30.30 Aligned_cols=84 Identities=17% Similarity=0.075 Sum_probs=57.0
Q ss_pred CCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccc-cc---cCCchHHHHH
Q 038818 180 QTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAI-TT---VDPLGPLCDI 255 (486)
Q Consensus 180 ~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~-G~---idpl~~I~~i 255 (486)
..+..+.+.+...|. .+.+... ...++++++.+++.-.+.|..- ++++..|++.. +. .-++..|..+
T Consensus 119 ~~n~~LL~~~a~~gk----PVilk~G----~~~t~~e~~~Ave~i~~~Gn~~-i~l~~rG~s~y~~~~~~~~dl~~i~~l 189 (260)
T TIGR01361 119 MQNFELLKEVGKQGK----PVLLKRG----MGNTIEEWLYAAEYILSSGNGN-VILCERGIRTFEKATRNTLDLSAVPVL 189 (260)
T ss_pred ccCHHHHHHHhcCCC----cEEEeCC----CCCCHHHHHHHHHHHHHcCCCc-EEEEECCCCCCCCCCcCCcCHHHHHHH
Confidence 345556666655554 4555532 1348999999999887777544 34444455433 43 3578899999
Q ss_pred HHHhCceEEeeccccch
Q 038818 256 AKRYSIWVHVDAAYAGS 272 (486)
Q Consensus 256 ~~~~g~~lhvD~a~g~~ 272 (486)
.+++++.+.+|..|.++
T Consensus 190 k~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 190 KKETHLPIIVDPSHAAG 206 (260)
T ss_pred HHhhCCCEEEcCCCCCC
Confidence 98899999999999765
No 405
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=56.43 E-value=97 Score=28.96 Aligned_cols=85 Identities=12% Similarity=0.030 Sum_probs=56.0
Q ss_pred CCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeec-CCccccc----cCCchHHH
Q 038818 179 DQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATV-GTTAITT----VDPLGPLC 253 (486)
Q Consensus 179 ~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~-gtt~~G~----idpl~~I~ 253 (486)
...++.+.+++...|. .+.+... .-.++++++.+++.-.+.|..- |+++. |++.... .-++..|.
T Consensus 108 ~~~n~~LL~~va~tgk----PVilk~G----~~~t~~e~~~A~e~i~~~Gn~~--i~L~eRg~~~Y~~~~~n~~dl~ai~ 177 (250)
T PRK13397 108 NMQNFEFLKTLSHIDK----PILFKRG----LMATIEEYLGALSYLQDTGKSN--IILCERGVRGYDVETRNMLDIMAVP 177 (250)
T ss_pred cccCHHHHHHHHccCC----eEEEeCC----CCCCHHHHHHHHHHHHHcCCCe--EEEEccccCCCCCccccccCHHHHH
Confidence 3345666666655554 5556532 1679999999998877766533 33333 4433332 35678888
Q ss_pred HHHHHhCceEEeeccccchh
Q 038818 254 DIAKRYSIWVHVDAAYAGSA 273 (486)
Q Consensus 254 ~i~~~~g~~lhvD~a~g~~~ 273 (486)
.+.+++++.+++|.+|.++.
T Consensus 178 ~lk~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 178 IIQQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred HHHHHhCCCeEECCCCCCcc
Confidence 88888999999999997653
No 406
>smart00642 Aamy Alpha-amylase domain.
Probab=55.40 E-value=26 Score=30.54 Aligned_cols=29 Identities=24% Similarity=0.256 Sum_probs=25.6
Q ss_pred cccccCCchHHHHHHHHhCceEEeecccc
Q 038818 242 AITTVDPLGPLCDIAKRYSIWVHVDAAYA 270 (486)
Q Consensus 242 ~~G~idpl~~I~~i~~~~g~~lhvD~a~g 270 (486)
..|..++++++++-|+++|+.+++|-+..
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 56888999999999999999999998653
No 407
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]
Probab=55.34 E-value=99 Score=32.69 Aligned_cols=120 Identities=19% Similarity=0.113 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeE-EEecCCCch------H
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLV-VYGSDQTHS------A 184 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~-v~~s~~~H~------s 184 (486)
..+...+.+-+.+.+-.+.. .|++.|||-.+.+.|..+++..- .... -|.....+. -
T Consensus 213 ~~l~~~l~~sV~~r~~advp-------vg~~lSGGlDSS~Iaa~a~~~~~---------~~~~~~fsvg~~~~~~~D~~~ 276 (542)
T COG0367 213 EHLRSLLEDAVKRRLVADVP-------VGVFLSGGLDSSLIAAIAAEELG---------KEGKTTFTVGFEDSDSPDAKY 276 (542)
T ss_pred HHHHHHHHHHHHHHhccCCc-------EEEEeCCCccHHHHHHHHHHhcc---------ccceeeeEeecCCCCCchHHH
Confidence 34444444444544433333 78999999988777666655421 1111 022222222 1
Q ss_pred HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEE
Q 038818 185 LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVH 264 (486)
Q Consensus 185 ~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lh 264 (486)
...+|+.+|. ..+.+. +..+++.+++.+... ..-.....+...|+--+++.+++.+.++.
T Consensus 277 a~~~A~~lg~---~h~~~~--------~~~~e~~~~~~~vv~---------~~~~p~~~~~~~ply~~~~~a~~~g~kVv 336 (542)
T COG0367 277 ARAVAKFLGT---PHHEII--------LTNEELLNALPEVVK---------ALDTPGGMAASIPLYLLSRKARAEGEKVV 336 (542)
T ss_pred HHHHHHHhCC---CcEEEe--------ecHHHHHHHHHHHHh---------hcCCCCcccchhHHHHHHHhhhhcCcEEe
Confidence 3566777887 555554 345667777665432 12122226677899999999999998888
Q ss_pred eec
Q 038818 265 VDA 267 (486)
Q Consensus 265 vD~ 267 (486)
..|
T Consensus 337 LSG 339 (542)
T COG0367 337 LSG 339 (542)
T ss_pred ecC
Confidence 743
No 408
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=54.91 E-value=44 Score=27.20 Aligned_cols=74 Identities=19% Similarity=0.229 Sum_probs=45.9
Q ss_pred cCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHH---HHHHHHHHHHCCCccEEEEeecCCcccc---cc-----
Q 038818 178 SDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPES---LQAAIDLDIQAGLIPLFLCATVGTTAIT---TV----- 246 (486)
Q Consensus 178 s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~---L~~~l~~~~~~g~~p~~vv~~~gtt~~G---~i----- 246 (486)
+.+...++..+++.+|+ ....||+.. +.+..++ ..++|.+. ..|++..+-.|+-.+- ..
T Consensus 43 ~QP~~~~i~~aa~~aGl---~y~~iPV~~---~~iT~~dV~~f~~Al~ea----egPVlayCrsGtRs~~ly~~~~~~~g 112 (130)
T COG3453 43 GQPGFAAIAAAAEAAGL---TYTHIPVTG---GGITEADVEAFQRALDEA----EGPVLAYCRSGTRSLNLYGLGELDGG 112 (130)
T ss_pred CCCChHHHHHHHHhcCC---ceEEeecCC---CCCCHHHHHHHHHHHHHh----CCCEEeeecCCchHHHHHHHHHHhcC
Confidence 34455678889999999 999999974 2455444 44555543 3477766666554331 11
Q ss_pred CCchHHHHHHHHhCc
Q 038818 247 DPLGPLCDIAKRYSI 261 (486)
Q Consensus 247 dpl~~I~~i~~~~g~ 261 (486)
-+.++|.++.+.+|+
T Consensus 113 m~~de~~a~g~a~G~ 127 (130)
T COG3453 113 MSRDEIEALGQAAGF 127 (130)
T ss_pred CCHHHHHHHHHhhCc
Confidence 345666666666664
No 409
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=54.56 E-value=17 Score=35.01 Aligned_cols=61 Identities=16% Similarity=0.182 Sum_probs=49.4
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh--C-ceEEe
Q 038818 203 KTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY--S-IWVHV 265 (486)
Q Consensus 203 ~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~--g-~~lhv 265 (486)
|.+. ++.+|.+++++.++...++|..-++++.+.|..++-+.++-.++.+.+.+. | +.+++
T Consensus 15 PF~~--dg~vD~~a~~~lv~~li~~Gv~gi~~~GttGE~~~Ls~eEr~~v~~~~v~~~~grvpvia 78 (299)
T COG0329 15 PFDE--DGSVDEEALRRLVEFLIAAGVDGLVVLGTTGESPTLTLEERKEVLEAVVEAVGGRVPVIA 78 (299)
T ss_pred CCCC--CCCcCHHHHHHHHHHHHHcCCCEEEECCCCccchhcCHHHHHHHHHHHHHHHCCCCcEEE
Confidence 4443 468999999999999999987667788888888888999999999988875 2 45554
No 410
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=54.36 E-value=93 Score=30.91 Aligned_cols=60 Identities=13% Similarity=0.052 Sum_probs=43.6
Q ss_pred cCHHHHHHHHHHHHHCCCccEEEEeecCCcccc---cc-CCchHHHHHHHHhCceEEeeccccch
Q 038818 212 LTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT---TV-DPLGPLCDIAKRYSIWVHVDAAYAGS 272 (486)
Q Consensus 212 ~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G---~i-dpl~~I~~i~~~~g~~lhvD~a~g~~ 272 (486)
.++++++.+++.-.+.|... ++++-.|++... .- -++..|..+.+++++++.+|..|.++
T Consensus 236 ~t~~e~~~Ave~i~~~Gn~~-i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 236 ATIEEFIYAAEYIMSQGNGQ-IILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTG 299 (360)
T ss_pred CCHHHHHHHHHHHHHCCCCC-EEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCc
Confidence 69999999998887777644 333332544322 11 37899999999999999999999765
No 411
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=53.70 E-value=32 Score=30.73 Aligned_cols=52 Identities=27% Similarity=0.203 Sum_probs=40.9
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEe
Q 038818 213 TPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHV 265 (486)
Q Consensus 213 d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhv 265 (486)
..-+-|..++=.+-.|..|..|++..-+ ..|.....+++.++|++||+.++.
T Consensus 139 R~GHTEasVdLarlAGl~Pa~VicEi~~-~dG~mar~~~~~~fa~~h~l~~it 190 (203)
T COG0108 139 RRGHTEAAVDLARLAGLKPAGVICEIMN-DDGTMARLPELEEFAKEHGLPVIT 190 (203)
T ss_pred cCChHHHHHHHHHHcCCCCcEEEEEEeC-CCccccChHHHHHHHHHcCCcEEE
Confidence 3445667777677789999877776644 489999999999999999998754
No 412
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff.
Probab=53.65 E-value=1.9e+02 Score=29.76 Aligned_cols=121 Identities=19% Similarity=0.158 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEe---c-CCCch---H
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYG---S-DQTHS---A 184 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~---s-~~~H~---s 184 (486)
.+++..+.+-+.+.+..+.. -|++.|||-.+.+.+..+++.. .+ .+...++ + ..... .
T Consensus 236 e~l~~~l~~aV~~r~~~~~~-------vg~~LSGGlDSs~iaa~a~~~~--~~------~~~~~~t~~~~~~~~~~E~~~ 300 (467)
T TIGR01536 236 DELRSLLEDAVKRRLVADVP-------VGVLLSGGLDSSLVAAIARREA--PR------GPVHTFSIGFEGSPDFDESPY 300 (467)
T ss_pred HHHHHHHHHHHHHHhccCCc-------eEEEecCChhHHHHHHHHHHhc--CC------CCceEEEEecCCCCCCChHHH
Confidence 44555555555555543332 5889999998876665544321 00 1122221 1 11112 3
Q ss_pred HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEE
Q 038818 185 LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVH 264 (486)
Q Consensus 185 ~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lh 264 (486)
..+.|+.+|+ ..+.+.+++ +++.+.+.+.......|. . ....-+.-.+.+.++++|+.++
T Consensus 301 A~~vA~~lg~---~~~~i~~~~--------~~~~~~~~~~v~~~~~p~--------~-~~~~~~~~~l~~~a~~~G~~vl 360 (467)
T TIGR01536 301 ARKVADHLGT---EHHEVLFSV--------EEGLDALPEVIYHLEDPT--------T-IRASIPLYLLSKLAREDGVKVV 360 (467)
T ss_pred HHHHHHHhCC---cCeEEECCH--------HHHHHHHHHHHHhhCCCC--------C-CchHHHHHHHHHHHHhcCCEEE
Confidence 5667888898 777776542 233333333221111121 1 1222355678888999999888
Q ss_pred eec
Q 038818 265 VDA 267 (486)
Q Consensus 265 vD~ 267 (486)
.+|
T Consensus 361 ltG 363 (467)
T TIGR01536 361 LSG 363 (467)
T ss_pred Eec
Confidence 876
No 413
>COG0386 BtuE Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]
Probab=53.50 E-value=65 Score=27.50 Aligned_cols=83 Identities=18% Similarity=0.254 Sum_probs=56.8
Q ss_pred cccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC--chHHHHHHHH-hCce------EEeeccccchhccCccch
Q 038818 210 FTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP--LGPLCDIAKR-YSIW------VHVDAAYAGSACICPEFR 280 (486)
Q Consensus 210 ~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp--l~~I~~i~~~-~g~~------lhvD~a~g~~~~~~~~~~ 280 (486)
+.--.+.||++.++-..+| ++|+-.+.|..|.-+| -++|.+.|.. ||+- ++|-|...... ++
T Consensus 39 fTpQYegLe~Ly~ky~~~G----f~VLgFPcNQF~~QEPg~~eEI~~fC~~~YgVtFp~f~Ki~VnG~~a~PL-----y~ 109 (162)
T COG0386 39 FTPQYEGLEALYKKYKDKG----FEVLGFPCNQFGGQEPGSDEEIAKFCQLNYGVTFPMFSKIDVNGKNAHPL-----YK 109 (162)
T ss_pred CcHhHHHHHHHHHHHhhCC----cEEEeccccccccCCCCCHHHHHHHHHhccCceeeeeeEEeecCCCCCcH-----HH
Confidence 4557789999999888887 6888888888887655 7899999985 6753 35555432221 22
Q ss_pred hhh---cCCCCCCceeeccccccC
Q 038818 281 HFI---DGIEGADSFSLNAHKWFF 301 (486)
Q Consensus 281 ~~~---~~~~~aDsi~~~~hK~l~ 301 (486)
.+. .+......|-|+++|++-
T Consensus 110 ~L~~~~~g~~~~~~IkWNFtKFLv 133 (162)
T COG0386 110 YLKEQKPGKLGGKDIKWNFTKFLV 133 (162)
T ss_pred HHHhcCCCCccCCccceeeEEEEE
Confidence 221 122346789999999874
No 414
>PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents protein-tyrosine phosphatases predominantly from fungi, plants and bacteria, several of which are putative enzymes. These proteins are closely related to the Y-phosphatase and DSPc families. This entry includes the PTPase SIW14 from Saccharomyces cerevisiae (Baker's yeast), which plays a role in actin filament organisation and endocytosis.; PDB: 2Q47_A 1XRI_A.
Probab=53.31 E-value=24 Score=30.63 Aligned_cols=72 Identities=14% Similarity=0.235 Sum_probs=38.7
Q ss_pred CeEEEecCC-CchHHHHHHHHcCCCCCCeEEEecCCCC--CcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 172 RLVVYGSDQ-THSALQKAAQIAGIDPKNFRAIKTTKSS--SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 172 ~~~v~~s~~-~H~s~~~a~~~~G~g~~~v~~v~~d~~~--~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
+.+|..+.. ........++-.|+ +++.++..... ...+..+.+.++|+--......|++|.+..|..-||.+
T Consensus 34 KTII~L~~e~~~~~~~~f~~~~~I---~l~~~~~~~~~~~~~~~~~~~v~~aL~~ild~~n~PvLiHC~~G~~rTG~v 108 (164)
T PF03162_consen 34 KTIINLRPEPPSQDFLEFAEENGI---KLIHIPMSSSKDPWVPISEEQVAEALEIILDPRNYPVLIHCNHGKDRTGLV 108 (164)
T ss_dssp SEEEE--SS---HHHHHHHHHTT----EEEE-------GGG----HHHHHHHHHHHH-GGG-SEEEE-SSSSSHHHHH
T ss_pred ceEEEecCCCCCHHHHHHHhhcCc---eEEEeccccccCccccCCHHHHHHHHHHHhCCCCCCEEEEeCCCCcchhhH
Confidence 556665544 34456667888999 99999886532 13467788888776433333459999999999999964
No 415
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=53.28 E-value=82 Score=24.59 Aligned_cols=72 Identities=11% Similarity=0.135 Sum_probs=43.4
Q ss_pred CCeEEEecCCCchHH--HHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC
Q 038818 171 SRLVVYGSDQTHSAL--QKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP 248 (486)
Q Consensus 171 ~~~~v~~s~~~H~s~--~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp 248 (486)
.+.+||....+++|. .+...-.|+ ....+.+|.+ .+..++.+.+.+.+.....|.+ ...| ...|..|+
T Consensus 8 ~~Vvvysk~~Cp~C~~ak~~L~~~~i---~~~~vdid~~----~~~~~~~~~l~~~tg~~tvP~V--fi~g-~~iGG~dd 77 (99)
T TIGR02189 8 KAVVIFSRSSCCMCHVVKRLLLTLGV---NPAVHEIDKE----PAGKDIENALSRLGCSPAVPAV--FVGG-KLVGGLEN 77 (99)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC---CCEEEEcCCC----ccHHHHHHHHHHhcCCCCcCeE--EECC-EEEcCHHH
Confidence 567777777777874 445566677 6677777642 2445566667655444455743 3333 45677777
Q ss_pred chHH
Q 038818 249 LGPL 252 (486)
Q Consensus 249 l~~I 252 (486)
+.++
T Consensus 78 l~~l 81 (99)
T TIGR02189 78 VMAL 81 (99)
T ss_pred HHHH
Confidence 6544
No 416
>PF07071 DUF1341: Protein of unknown function (DUF1341); InterPro: IPR010763 Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.; PDB: 3NZR_D 3LM7_A 3M0Z_B 3M6Y_A 3N73_A 3MUX_A.
Probab=52.89 E-value=58 Score=29.09 Aligned_cols=69 Identities=10% Similarity=0.085 Sum_probs=43.2
Q ss_pred HHHHHHHHc-CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc--CCchHHHHHHHHhC
Q 038818 184 ALQKAAQIA-GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV--DPLGPLCDIAKRYS 260 (486)
Q Consensus 184 s~~~a~~~~-G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i--dpl~~I~~i~~~~g 260 (486)
+++.++.++ .+|...+.++|.. |.-.+|+|+..-+.+.++|. . + -|||.| |.+++|.++|.+.|
T Consensus 136 ~vetAiaml~dmG~~SiKffPm~----Gl~~leE~~avAkA~a~~g~---~--l----EPTGGIdl~N~~~I~~i~l~aG 202 (218)
T PF07071_consen 136 PVETAIAMLKDMGGSSIKFFPMG----GLKHLEELKAVAKACARNGF---T--L----EPTGGIDLDNFEEIVKICLDAG 202 (218)
T ss_dssp EHHHHHHHHHHTT--EEEE---T----TTTTHHHHHHHHHHHHHCT----E--E----EEBSS--TTTHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHcCCCeeeEeecC----CcccHHHHHHHHHHHHHcCc---e--e----CCcCCcCHHHHHHHHHHHHHcC
Confidence 456665544 4566688899985 35578999888888877762 1 1 367877 68999999999998
Q ss_pred ceEEe
Q 038818 261 IWVHV 265 (486)
Q Consensus 261 ~~lhv 265 (486)
+..++
T Consensus 203 v~~vi 207 (218)
T PF07071_consen 203 VEKVI 207 (218)
T ss_dssp -S-B-
T ss_pred CCeec
Confidence 75543
No 417
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=51.21 E-value=36 Score=33.87 Aligned_cols=94 Identities=17% Similarity=0.198 Sum_probs=54.3
Q ss_pred cCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHH
Q 038818 178 SDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAK 257 (486)
Q Consensus 178 s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~ 257 (486)
....|..+.|. +++.. ..++.+++..+. ....+.+.|.+.++....+-. .|+.+ -..-|.+.+++++.++||
T Consensus 97 ~~~~r~T~~K~-Rv~s~-nQQllRvD~Ee~-~~~~~~~~ll~~~~~~l~~~~---~vVLS--DY~KG~L~~~q~~I~~ar 168 (467)
T COG2870 97 RDKNRPTIVKL-RVLSR-NQQLLRLDFEEK-FPIEDENKLLEKIKNALKSFD---ALVLS--DYAKGVLTNVQKMIDLAR 168 (467)
T ss_pred eecCCCceeee-eeecc-cceEEEeccccc-CcchhHHHHHHHHHHHhhcCC---EEEEe--ccccccchhHHHHHHHHH
Confidence 34455555443 22221 126777766532 112455555555655443211 23332 345799999999999999
Q ss_pred HhCceEEeec------cccchhccCccc
Q 038818 258 RYSIWVHVDA------AYAGSACICPEF 279 (486)
Q Consensus 258 ~~g~~lhvD~------a~g~~~~~~~~~ 279 (486)
+.|+++.||- =|.|..+..|..
T Consensus 169 ~~~~pVLvDPKg~Df~~Y~GAtLiTPN~ 196 (467)
T COG2870 169 EAGIPVLVDPKGKDFEKYRGATLITPNL 196 (467)
T ss_pred HcCCcEEECCCCcchhhhCCCeecCCCH
Confidence 9999999993 344544555543
No 418
>TIGR01275 ACC_deam_rel pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family. This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).
Probab=51.00 E-value=82 Score=30.47 Aligned_cols=54 Identities=11% Similarity=0.073 Sum_probs=31.7
Q ss_pred eEEcCCchHHHHHHHH-HHHHHHHHHccccCCCCeEEEecCCCc-hHHHHHHHHcCCCCCCeEEEec
Q 038818 140 GVIQGTTCEAILCTLA-AARDQILNEIGRENISRLVVYGSDQTH-SALQKAAQIAGIDPKNFRAIKT 204 (486)
Q Consensus 140 ~~~t~ggt~a~~~al~-~a~~~~~~~~~~~~~~~~~v~~s~~~H-~s~~~a~~~~G~g~~~v~~v~~ 204 (486)
.+++.|||.+|...-. ++...+ | -+.+|+++.... ......++.+|. +|+.++-
T Consensus 58 ~vv~~g~ssGN~g~alA~~a~~~-------G-~~~~ivvp~~~~~~~~~~~~~~~Ga---~v~~v~~ 113 (311)
T TIGR01275 58 TVITVGAIQSNHARATALAAKKL-------G-LDAVLVLREKEELNGNLLLDKLMGA---ETRVYSA 113 (311)
T ss_pred EEEEcCCchhHHHHHHHHHHHHh-------C-CceEEEecCCccCCCCHHHHHHcCC---EEEEECc
Confidence 5788877777754322 222221 1 356777786432 223445688999 9988863
No 419
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=50.89 E-value=47 Score=31.86 Aligned_cols=61 Identities=15% Similarity=0.125 Sum_probs=42.1
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 203 KTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 203 ~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
|.++ ++++|.+.+++.++...+.|..-+++..+.|....-+.+.-.++.+.+.+. ++++++
T Consensus 11 Pf~~--dg~iD~~~l~~l~~~l~~~Gv~gi~v~GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~ 74 (289)
T cd00951 11 HFDA--DGSFDEDAYRAHVEWLLSYGAAALFAAGGTGEFFSLTPDEYAQVVRAAVEETAGRVPVLA 74 (289)
T ss_pred CCCC--CCCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 4443 569999999999999888876655566666655555666667777665554 355554
No 420
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=50.80 E-value=2e+02 Score=27.22 Aligned_cols=78 Identities=14% Similarity=0.076 Sum_probs=49.1
Q ss_pred CCeEEEecCCCchHHHHHHH---HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc-
Q 038818 171 SRLVVYGSDQTHSALQKAAQ---IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV- 246 (486)
Q Consensus 171 ~~~~v~~s~~~H~s~~~a~~---~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i- 246 (486)
+..+|++.....--..-+.+ ..|+ ++..+|.|= -|++++++..++...++...-++|-++|....|.+
T Consensus 30 g~~liLvaR~~~kL~~la~~l~~~~~v---~v~vi~~DL-----s~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~ 101 (265)
T COG0300 30 GYNLILVARREDKLEALAKELEDKTGV---EVEVIPADL-----SDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFL 101 (265)
T ss_pred CCEEEEEeCcHHHHHHHHHHHHHhhCc---eEEEEECcC-----CChhHHHHHHHHHHhcCCcccEEEECCCcCCccchh
Confidence 56677777655432222222 2356 788888873 36777887777666655556678888888888855
Q ss_pred -CCchHHHHHH
Q 038818 247 -DPLGPLCDIA 256 (486)
Q Consensus 247 -dpl~~I~~i~ 256 (486)
.+++++.++-
T Consensus 102 ~~~~~~~~~mi 112 (265)
T COG0300 102 ELSLDEEEEMI 112 (265)
T ss_pred hCChHHHHHHH
Confidence 3455555543
No 421
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=50.42 E-value=1.1e+02 Score=30.10 Aligned_cols=83 Identities=12% Similarity=0.042 Sum_probs=54.1
Q ss_pred chHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCC-----ccccccCCchHHHHHH
Q 038818 182 HSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGT-----TAITTVDPLGPLCDIA 256 (486)
Q Consensus 182 H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gt-----t~~G~idpl~~I~~i~ 256 (486)
++.+.+.+...| ..+.+... ..++++++..+++.-.+.|..- ++++..|. +.+-..-++..|..+.
T Consensus 197 n~~LL~~va~t~----kPVllk~G----~~~t~ee~~~A~e~i~~~Gn~~-viL~erG~rtf~s~y~~~~~dl~ai~~lk 267 (352)
T PRK13396 197 NFSLLKKVGAQD----KPVLLKRG----MAATIDEWLMAAEYILAAGNPN-VILCERGIRTFDRQYTRNTLDLSVIPVLR 267 (352)
T ss_pred CHHHHHHHHccC----CeEEEeCC----CCCCHHHHHHHHHHHHHcCCCe-EEEEecCCccCcCCCCCCCcCHHHHHHHH
Confidence 344544444444 34555432 2459999999998877666533 45555543 1222446789999998
Q ss_pred HHhCceEEeeccccchh
Q 038818 257 KRYSIWVHVDAAYAGSA 273 (486)
Q Consensus 257 ~~~g~~lhvD~a~g~~~ 273 (486)
+.+++.+++|.+|+.+.
T Consensus 268 ~~~~lPVi~DpsH~~G~ 284 (352)
T PRK13396 268 SLTHLPIMIDPSHGTGK 284 (352)
T ss_pred HhhCCCEEECCcccCCc
Confidence 88899999999998753
No 422
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=50.15 E-value=22 Score=34.21 Aligned_cols=52 Identities=12% Similarity=0.271 Sum_probs=39.4
Q ss_pred CCcccCHHHHHHHHHHHHH-CCCccEEEEeecCCccccccCCchHHHHHHHHh
Q 038818 208 SSFTLTPESLQAAIDLDIQ-AGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY 259 (486)
Q Consensus 208 ~~~~~d~~~L~~~l~~~~~-~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~ 259 (486)
.++.+|.+.+++.++...+ .|..-+++..+.|....-+.+.-.++.+.+.+.
T Consensus 17 ~dg~iD~~~~~~li~~l~~~~Gv~gi~v~GstGE~~~Ls~eEr~~~~~~~~~~ 69 (293)
T PRK04147 17 EDGQIDEQGLRRLVRFNIEKQGIDGLYVGGSTGEAFLLSTEEKKQVLEIVAEE 69 (293)
T ss_pred CCCCcCHHHHHHHHHHHHhcCCCCEEEECCCccccccCCHHHHHHHHHHHHHH
Confidence 3679999999999999888 786666666666666666667777777766654
No 423
>TIGR00334 5S_RNA_mat_M5 ribonuclease M5. This family of orthologous proteins shows a weak but significant similarity to the central region of the DnaG-type DNA primase. The region of similarity is termed the Toprim (topoisomerase-primase) domain and is also shared by RecR, OLD family nucleases, and type IA and II topoisomerases.
Probab=49.64 E-value=16 Score=31.91 Aligned_cols=53 Identities=13% Similarity=0.206 Sum_probs=40.8
Q ss_pred cccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchh
Q 038818 210 FTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSA 273 (486)
Q Consensus 210 ~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~ 273 (486)
|+-|...|+++++. -++.|.|+.. ..+-++.|.++.++.|+.+..|.-++|-.
T Consensus 10 GK~D~~~lk~~~d~---------~~I~T~Gs~i--~~~~i~~i~~~~~~rgVIIfTDpD~~Gek 62 (174)
T TIGR00334 10 GKDDQARIKQAFDV---------DVIETNGSAL--KDETINLIKKAQKKQGVIILTDPDFPGEK 62 (174)
T ss_pred cchHHHHHHHhcCc---------eEEEECCCcc--CHHHHHHHHHHhhcCCEEEEeCCCCchHH
Confidence 47899999888752 2667766543 34558888889999999999999888754
No 424
>COG0021 TktA Transketolase [Carbohydrate transport and metabolism]
Probab=49.31 E-value=3.4e+02 Score=29.05 Aligned_cols=52 Identities=17% Similarity=0.132 Sum_probs=34.3
Q ss_pred cccCHHHHHHHHHHHHHCCCccEEEEeec----CCcc-cccc----CCc--hHHHHHHHHhCce
Q 038818 210 FTLTPESLQAAIDLDIQAGLIPLFLCATV----GTTA-ITTV----DPL--GPLCDIAKRYSIW 262 (486)
Q Consensus 210 ~~~d~~~L~~~l~~~~~~g~~p~~vv~~~----gtt~-~G~i----dpl--~~I~~i~~~~g~~ 262 (486)
|. |++++.++|++.++...+|.+|++-. |+.. -|.- .|| +++.+..++.|.-
T Consensus 220 G~-D~e~I~~Ai~~Ak~~~dkPtlI~~kTiIG~Gsp~kegt~~~HGapLg~~ev~~~k~~lgw~ 282 (663)
T COG0021 220 GH-DLEAIDKAIEEAKASTDKPTLIIVKTIIGKGSPNKEGTHKVHGAPLGEEEVAAAKKALGWE 282 (663)
T ss_pred CC-CHHHHHHHHHHHHhcCCCCeEEEEEeeeecCCCCcCCCccccCCCCCHHHHHHHHHHhCCC
Confidence 35 99999999999888777787776532 3332 2221 455 5777777776643
No 425
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=48.70 E-value=17 Score=31.51 Aligned_cols=48 Identities=15% Similarity=0.243 Sum_probs=36.1
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhC--ceEEeeccccc
Q 038818 213 TPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYS--IWVHVDAAYAG 271 (486)
Q Consensus 213 d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g--~~lhvD~a~g~ 271 (486)
|..+|+++++.+.+ +|++- +|.+-.|+++.+..++.| +++|||=..|.
T Consensus 12 ~~~~le~~les~~~------~vflL-----~~~i~~ik~ivk~lK~~gK~vfiHvDLv~Gl 61 (181)
T COG1954 12 DNKDLEKALESESQ------YVFLL-----TGHILNIKEIVKKLKNRGKTVFIHVDLVEGL 61 (181)
T ss_pred hHHHHHHHhcCCCe------EEEEE-----echhhhHHHHHHHHHhCCcEEEEEeHHhccc
Confidence 56778888876533 34432 588999999999999987 78899976654
No 426
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=48.51 E-value=57 Score=31.74 Aligned_cols=93 Identities=22% Similarity=0.277 Sum_probs=60.5
Q ss_pred CCeEEEecCCCchH-----HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHH-HHHHHHHHCCCccEEEEeecC--Ccc
Q 038818 171 SRLVVYGSDQTHSA-----LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQ-AAIDLDIQAGLIPLFLCATVG--TTA 242 (486)
Q Consensus 171 ~~~~v~~s~~~H~s-----~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~-~~l~~~~~~g~~p~~vv~~~g--tt~ 242 (486)
+..+++.-..++-+ +...++.+|+ .++.-+ . .-|+.++. .+++...+++.. ++++-|+| +|-
T Consensus 167 g~~VllaA~DTFRAaAiEQL~~w~er~gv---~vI~~~--~----G~DpAaVafDAi~~Akar~~D-vvliDTAGRLhnk 236 (340)
T COG0552 167 GKSVLLAAGDTFRAAAIEQLEVWGERLGV---PVISGK--E----GADPAAVAFDAIQAAKARGID-VVLIDTAGRLHNK 236 (340)
T ss_pred CCeEEEEecchHHHHHHHHHHHHHHHhCC---eEEccC--C----CCCcHHHHHHHHHHHHHcCCC-EEEEeCcccccCc
Confidence 45566655555543 2334556677 665543 1 22666444 556666655554 36788887 777
Q ss_pred ccccCCchHHHHHHHHhC------ceEEeeccccchh
Q 038818 243 ITTVDPLGPLCDIAKRYS------IWVHVDAAYAGSA 273 (486)
Q Consensus 243 ~G~idpl~~I~~i~~~~g------~~lhvD~a~g~~~ 273 (486)
....+.|++|.+++++.. +++.+|+.-|-..
T Consensus 237 ~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqna 273 (340)
T COG0552 237 KNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNA 273 (340)
T ss_pred hhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhH
Confidence 888899999999999865 6777799876543
No 427
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=47.30 E-value=37 Score=32.39 Aligned_cols=57 Identities=14% Similarity=0.230 Sum_probs=42.3
Q ss_pred EEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh
Q 038818 201 AIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY 259 (486)
Q Consensus 201 ~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~ 259 (486)
..|.++ ++.+|.+.+++.++...+.|..-+++..+.|....-+.+.-.++.+++.+.
T Consensus 9 ~TPf~~--dg~iD~~~~~~~i~~l~~~Gv~gl~v~GstGE~~~lt~~Er~~l~~~~~~~ 65 (284)
T cd00950 9 VTPFKD--DGSVDFDALERLIEFQIENGTDGLVVCGTTGESPTLSDEEHEAVIEAVVEA 65 (284)
T ss_pred eCCcCC--CCCcCHHHHHHHHHHHHHcCCCEEEECCCCcchhhCCHHHHHHHHHHHHHH
Confidence 335554 579999999999999888887666666666666666667777887776665
No 428
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=47.10 E-value=1.4e+02 Score=26.09 Aligned_cols=70 Identities=14% Similarity=0.059 Sum_probs=35.7
Q ss_pred CCeEEEecCCC--chH---HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 171 SRLVVYGSDQT--HSA---LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 171 ~~~~v~~s~~~--H~s---~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
...+|+++... ... ..+..+..|. +|..+.+| --|.++++++++...+...+...|+-.++....+.
T Consensus 25 ~~~~il~~r~~~~~~~~~~~i~~l~~~g~---~v~~~~~D-----v~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~ 96 (181)
T PF08659_consen 25 ARRLILLGRSGAPSAEAEAAIRELESAGA---RVEYVQCD-----VTDPEAVAAALAQLRQRFGPIDGVIHAAGVLADAP 96 (181)
T ss_dssp -SEEEEEESSGGGSTTHHHHHHHHHHTT----EEEEEE-------TTSHHHHHHHHHTSHTTSS-EEEEEE-------B-
T ss_pred CCEEEEeccCCCccHHHHHHHHHHHhCCC---ceeeeccC-----ccCHHHHHHHHHHHHhccCCcceeeeeeeeecccc
Confidence 34566667662 222 3334445577 89999887 45899999999877655533335666666555555
Q ss_pred cCC
Q 038818 246 VDP 248 (486)
Q Consensus 246 idp 248 (486)
+.+
T Consensus 97 ~~~ 99 (181)
T PF08659_consen 97 IQD 99 (181)
T ss_dssp GCC
T ss_pred ccc
Confidence 543
No 429
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=46.56 E-value=40 Score=32.70 Aligned_cols=57 Identities=18% Similarity=0.128 Sum_probs=43.8
Q ss_pred CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 209 SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
+|.+|.+.+++.++...+.|..-+++..+.|...+-+.+.-.++.+.+.+. ++.+++
T Consensus 23 ~g~iD~~~l~~lv~~li~~Gv~Gi~v~GstGE~~~Lt~eEr~~v~~~~~~~~~grvpvi~ 82 (309)
T cd00952 23 TDTVDLDETARLVERLIAAGVDGILTMGTFGECATLTWEEKQAFVATVVETVAGRVPVFV 82 (309)
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECcccccchhCCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 479999999999999988887666677777777777778888888777653 355544
No 430
>TIGR01244 conserved hypothetical protein TIGR01244. No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.
Probab=46.37 E-value=1.1e+02 Score=25.44 Aligned_cols=69 Identities=19% Similarity=0.205 Sum_probs=45.9
Q ss_pred HHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc---------CCchHHHHHH
Q 038818 186 QKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV---------DPLGPLCDIA 256 (486)
Q Consensus 186 ~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i---------dpl~~I~~i~ 256 (486)
.+.+...|+ +.+.+|+.. +.++.+.+++..+-- .....|+++.+..|. -+|.+ -+.++|.+.+
T Consensus 50 ~~~a~~~gl---~y~~iPv~~---~~~~~~~v~~f~~~~-~~~~~pvL~HC~sG~-Rt~~l~al~~~~~g~~~~~i~~~~ 121 (135)
T TIGR01244 50 KAAAEAAGV---TYHHQPVTA---GDITPDDVETFRAAI-GAAEGPVLAYCRSGT-RSSLLWGFRQAAEGVPVEEIVRRA 121 (135)
T ss_pred HHHHHHCCC---eEEEeecCC---CCCCHHHHHHHHHHH-HhCCCCEEEEcCCCh-HHHHHHHHHHHHcCCCHHHHHHHH
Confidence 456677899 999999874 256655554433221 223468888888887 67753 4678888888
Q ss_pred HHhCce
Q 038818 257 KRYSIW 262 (486)
Q Consensus 257 ~~~g~~ 262 (486)
++.|.-
T Consensus 122 ~~~G~~ 127 (135)
T TIGR01244 122 QAAGYD 127 (135)
T ss_pred HHcCCC
Confidence 876653
No 431
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=45.80 E-value=1.1e+02 Score=25.80 Aligned_cols=55 Identities=22% Similarity=0.155 Sum_probs=36.3
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCc--hHHHHHHH
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPL--GPLCDIAK 257 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl--~~I~~i~~ 257 (486)
++..++.| --+.+.+++.+++..+.....-+++.++|....+.++++ +++.+..+
T Consensus 53 ~~~~~~~D-----~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~ 109 (167)
T PF00106_consen 53 KITFIECD-----LSDPESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFR 109 (167)
T ss_dssp EEEEEESE-----TTSHHHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHH
T ss_pred cccccccc-----ccccccccccccccccccccccccccccccccccccccccchhhhhccc
Confidence 88888887 348888998888766443344467777777666766654 44444333
No 432
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=44.79 E-value=47 Score=29.70 Aligned_cols=51 Identities=22% Similarity=0.209 Sum_probs=39.7
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEE
Q 038818 213 TPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVH 264 (486)
Q Consensus 213 d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lh 264 (486)
...+-|..++=..-.|..|..|++..-+- .|..-+.+++.+++++||+.++
T Consensus 135 R~GhtEaavdLa~lAGl~p~avi~eil~~-dG~~~~~~~~~~fA~~~~l~~v 185 (194)
T PF00926_consen 135 RRGHTEAAVDLARLAGLSPVAVICEILDD-DGDMARRDELEEFAKKHGLPIV 185 (194)
T ss_dssp SSSHHHHHHHHHHHTTS-SBEEEEEBBET-TSSBHCHHHHHHHHHHTT-EEE
T ss_pred CCChHHHHHHHHHHhCCCCcEEEEEEeCC-CCCcCCHHHHHHHHHHcCCcEE
Confidence 44567777777777899998888777644 8999999999999999999875
No 433
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=44.42 E-value=45 Score=31.98 Aligned_cols=57 Identities=16% Similarity=0.109 Sum_probs=41.3
Q ss_pred EEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh
Q 038818 201 AIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY 259 (486)
Q Consensus 201 ~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~ 259 (486)
..|.++ ++.+|.+.+++.++...+.|..-+++..+.|....-+.+.-.++.+.+.+.
T Consensus 10 ~TPf~~--dg~iD~~~l~~~i~~l~~~Gv~gi~~~Gs~GE~~~ls~~Er~~~~~~~~~~ 66 (292)
T PRK03170 10 VTPFKE--DGSVDFAALRKLVDYLIANGTDGLVVVGTTGESPTLTHEEHEELIRAVVEA 66 (292)
T ss_pred eCCcCC--CCCcCHHHHHHHHHHHHHcCCCEEEECCcCCccccCCHHHHHHHHHHHHHH
Confidence 345554 679999999999999888887766666666666666667777777766553
No 434
>cd00886 MogA_MoaB MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.
Probab=44.21 E-value=1.3e+02 Score=25.56 Aligned_cols=63 Identities=16% Similarity=0.049 Sum_probs=39.8
Q ss_pred chHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHH
Q 038818 182 HSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCD 254 (486)
Q Consensus 182 H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~ 254 (486)
.+.+...++..|+ ++....+-++ |++.++++|++..++ ...-+|+ +.|.+..|..|-..+..+
T Consensus 22 ~~~l~~~l~~~G~---~v~~~~~v~D-----d~~~i~~~l~~~~~~-~~~DlVi-ttGG~s~g~~D~t~~al~ 84 (152)
T cd00886 22 GPALVELLEEAGH---EVVAYEIVPD-----DKDEIREALIEWADE-DGVDLIL-TTGGTGLAPRDVTPEATR 84 (152)
T ss_pred HHHHHHHHHHcCC---eeeeEEEcCC-----CHHHHHHHHHHHHhc-CCCCEEE-ECCCcCCCCCcCcHHHHH
Confidence 3456677888888 7777765432 788888888776541 0122444 446666788887665443
No 435
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=43.93 E-value=2.5e+02 Score=25.54 Aligned_cols=69 Identities=10% Similarity=0.062 Sum_probs=50.1
Q ss_pred HHHHHHHHc-CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc--CCchHHHHHHHHhC
Q 038818 184 ALQKAAQIA-GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV--DPLGPLCDIAKRYS 260 (486)
Q Consensus 184 s~~~a~~~~-G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i--dpl~~I~~i~~~~g 260 (486)
+++.++.++ .+|.+.+.++|.. |.-..++++..-+.+.++|. + --|||.| |.+++|.++|.+-|
T Consensus 136 ~vetAiaml~dmG~~SiKffPM~----Gl~~leE~~avA~aca~~g~-~--------lEPTGGIdl~Nf~~I~~i~ldaG 202 (236)
T TIGR03581 136 PIETAIAMLKDMGGSSVKFFPMG----GLKHLEEYAAVAKACAKHGF-Y--------LEPTGGIDLDNFEEIVQIALDAG 202 (236)
T ss_pred eHHHHHHHHHHcCCCeeeEeecC----CcccHHHHHHHHHHHHHcCC-c--------cCCCCCccHHhHHHHHHHHHHcC
Confidence 456665554 4666689999985 35578888887777777663 1 1468877 57999999999998
Q ss_pred ceEEe
Q 038818 261 IWVHV 265 (486)
Q Consensus 261 ~~lhv 265 (486)
+..++
T Consensus 203 v~kvi 207 (236)
T TIGR03581 203 VEKVI 207 (236)
T ss_pred CCeec
Confidence 76654
No 436
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=43.68 E-value=44 Score=31.11 Aligned_cols=98 Identities=17% Similarity=0.102 Sum_probs=55.4
Q ss_pred ceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCch----HH---HHHHHHcCCCCCCeEEEecCCCCCcc
Q 038818 139 GGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHS----AL---QKAAQIAGIDPKNFRAIKTTKSSSFT 211 (486)
Q Consensus 139 ~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~----s~---~~a~~~~G~g~~~v~~v~~d~~~~~~ 211 (486)
-.+..|||..+.+.|..+.-.. ++.++.++...-| ++ ...|+..|+ +-..++++ .
T Consensus 20 v~vAfSGGvDSslLa~la~~~l----------G~~v~AvTv~sP~~p~~e~e~A~~~A~~iGi---~H~~i~~~-----~ 81 (269)
T COG1606 20 VVVAFSGGVDSSLLAKLAKEAL----------GDNVVAVTVDSPYIPRREIEEAKNIAKEIGI---RHEFIKMN-----R 81 (269)
T ss_pred EEEEecCCccHHHHHHHHHHHh----------ccceEEEEEecCCCChhhhhHHHHHHHHhCC---cceeeehh-----h
Confidence 4677899998887765553321 2223322222222 22 334666788 77888876 4
Q ss_pred cCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccc
Q 038818 212 LTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAG 271 (486)
Q Consensus 212 ~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~ 271 (486)
|+++--+.. ..+.+ .+.-+=.+.|.+.++++|..+++||+.+.
T Consensus 82 ~~~~~~~n~--------~~rCY---------~CK~~v~~~l~~~a~~~Gyd~V~dGtNas 124 (269)
T COG1606 82 MDPEFKENP--------ENRCY---------LCKRAVYSTLVEEAEKRGYDVVADGTNAS 124 (269)
T ss_pred cchhhccCC--------CCcch---------HHHHHHHHHHHHHHHHcCCCEEEeCCcHH
Confidence 552221111 11111 12223356788899999999999998754
No 437
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=43.55 E-value=42 Score=32.10 Aligned_cols=58 Identities=12% Similarity=0.165 Sum_probs=42.5
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh
Q 038818 200 RAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY 259 (486)
Q Consensus 200 ~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~ 259 (486)
...|.++ ++.+|.+.+++.++...+.|...+++..+.|....-+.+.-.++.+.+.+.
T Consensus 6 ~~TPf~~--~g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~Ls~~Er~~~~~~~~~~ 63 (285)
T TIGR00674 6 LITPFKE--DGSVDFAALEKLIDFQIENGTDAIVVVGTTGESPTLSHEEHKKVIEFVVDL 63 (285)
T ss_pred eeCCcCC--CCCcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHHH
Confidence 3446664 569999999999998888887776666666666666667777777766654
No 438
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=42.87 E-value=37 Score=32.31 Aligned_cols=63 Identities=16% Similarity=0.135 Sum_probs=41.9
Q ss_pred EEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 201 AIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 201 ~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
..|.++ ++.+|.+.+++.++...+.|..-+++..+.|....-+.+.-.++.+.+.+. .+.+++
T Consensus 6 ~TPf~~--dg~iD~~~~~~~i~~l~~~Gv~gi~~~GstGE~~~ls~~Er~~l~~~~~~~~~~~~~vi~ 71 (281)
T cd00408 6 VTPFTA--DGEVDLDALRRLVEFLIEAGVDGLVVLGTTGEAPTLTDEERKEVIEAVVEAVAGRVPVIA 71 (281)
T ss_pred eCCcCC--CCCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 345654 569999999999999888776555555555555555556666777666554 344443
No 439
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=42.78 E-value=17 Score=38.73 Aligned_cols=43 Identities=21% Similarity=0.056 Sum_probs=35.2
Q ss_pred CCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccch
Q 038818 228 GLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGS 272 (486)
Q Consensus 228 g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~ 272 (486)
|+.+ +-.=++++..|.-++++++++-|++.||-+++|-+++-+
T Consensus 197 GYq~--~g~yAp~sryGtPedfk~fVD~aH~~GIgViLD~V~~HF 239 (628)
T COG0296 197 GYQG--TGYYAPTSRYGTPEDFKALVDAAHQAGIGVILDWVPNHF 239 (628)
T ss_pred CCCc--ceeccccccCCCHHHHHHHHHHHHHcCCEEEEEecCCcC
Confidence 4444 334457888999999999999999999999999988653
No 440
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=42.00 E-value=62 Score=29.07 Aligned_cols=51 Identities=22% Similarity=0.163 Sum_probs=40.7
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEE
Q 038818 213 TPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVH 264 (486)
Q Consensus 213 d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lh 264 (486)
..-+-|..++=..-.|..|..|++..- +..|.....+++.++|++||+.++
T Consensus 140 R~GhTEaavdL~~lAGl~p~~vicEil-~~dG~m~~~~~~~~fA~~~~l~~i 190 (199)
T TIGR00506 140 RGGHTEASVDLAELAGLKPAGVICEMM-NDDGTMARKPELMEYAKKHNLKLI 190 (199)
T ss_pred CCChHHHHHHHHHHcCCCceEEEEEEe-CCCCCccCHHHHHHHHHHcCCcEE
Confidence 445567777776777888988777774 447999999999999999999883
No 441
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=41.50 E-value=56 Score=31.46 Aligned_cols=56 Identities=16% Similarity=0.128 Sum_probs=42.6
Q ss_pred EecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh
Q 038818 202 IKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY 259 (486)
Q Consensus 202 v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~ 259 (486)
.|.++ ++.+|.+.+++.++...+.|..-+++..+.|....-+.+.-.++.+.+.+.
T Consensus 15 TPf~~--dg~iD~~~l~~li~~l~~~Gv~gi~v~GstGE~~~Lt~eEr~~v~~~~~~~ 70 (296)
T TIGR03249 15 TPFDA--DGSFDEAAYRENIEWLLGYGLEALFAAGGTGEFFSLTPAEYEQVVEIAVST 70 (296)
T ss_pred CCcCC--CCCcCHHHHHHHHHHHHhcCCCEEEECCCCcCcccCCHHHHHHHHHHHHHH
Confidence 35554 579999999999999988887666666777777777777777888766654
No 442
>PRK10638 glutaredoxin 3; Provisional
Probab=41.00 E-value=1.5e+02 Score=21.99 Aligned_cols=68 Identities=13% Similarity=0.168 Sum_probs=38.9
Q ss_pred CeEEEecCCCchH--HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCc
Q 038818 172 RLVVYGSDQTHSA--LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPL 249 (486)
Q Consensus 172 ~~~v~~s~~~H~s--~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl 249 (486)
+.++|....+.+| ........|+ ....++++. +.+ ..+.+.+.......|.+++ +....|..+++
T Consensus 3 ~v~ly~~~~Cp~C~~a~~~L~~~gi---~y~~~dv~~------~~~-~~~~l~~~~g~~~vP~i~~---~g~~igG~~~~ 69 (83)
T PRK10638 3 NVEIYTKATCPFCHRAKALLNSKGV---SFQEIPIDG------DAA-KREEMIKRSGRTTVPQIFI---DAQHIGGCDDL 69 (83)
T ss_pred cEEEEECCCChhHHHHHHHHHHcCC---CcEEEECCC------CHH-HHHHHHHHhCCCCcCEEEE---CCEEEeCHHHH
Confidence 4567777777777 4556677788 777787764 222 2333444444455675422 23445555555
Q ss_pred hHH
Q 038818 250 GPL 252 (486)
Q Consensus 250 ~~I 252 (486)
.++
T Consensus 70 ~~~ 72 (83)
T PRK10638 70 YAL 72 (83)
T ss_pred HHH
Confidence 544
No 443
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=40.96 E-value=1.1e+02 Score=27.75 Aligned_cols=76 Identities=20% Similarity=0.116 Sum_probs=43.8
Q ss_pred CeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchH
Q 038818 172 RLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGP 251 (486)
Q Consensus 172 ~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~ 251 (486)
..++++.. ......+..+..|+ +++..+.+ |.+.|.++++... .|+...+.+....++--..
T Consensus 24 ~V~~l~R~-~~~~~~~~l~~~g~---~vv~~d~~-------~~~~l~~al~g~d-------~v~~~~~~~~~~~~~~~~~ 85 (233)
T PF05368_consen 24 SVRALVRD-PSSDRAQQLQALGA---EVVEADYD-------DPESLVAALKGVD-------AVFSVTPPSHPSELEQQKN 85 (233)
T ss_dssp CEEEEESS-SHHHHHHHHHHTTT---EEEES-TT--------HHHHHHHHTTCS-------EEEEESSCSCCCHHHHHHH
T ss_pred CcEEEEec-cchhhhhhhhcccc---eEeecccC-------CHHHHHHHHcCCc-------eEEeecCcchhhhhhhhhh
Confidence 44455443 33334444556777 66544332 8899999988532 3444444333344455678
Q ss_pred HHHHHHHhCceEEe
Q 038818 252 LCDIAKRYSIWVHV 265 (486)
Q Consensus 252 I~~i~~~~g~~lhv 265 (486)
|.+.|++.|+..+|
T Consensus 86 li~Aa~~agVk~~v 99 (233)
T PF05368_consen 86 LIDAAKAAGVKHFV 99 (233)
T ss_dssp HHHHHHHHT-SEEE
T ss_pred HHHhhhccccceEE
Confidence 99999999986666
No 444
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD). This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. The domain is presumed to bind molybdopterin.
Probab=40.78 E-value=1.4e+02 Score=24.63 Aligned_cols=62 Identities=18% Similarity=0.099 Sum_probs=39.0
Q ss_pred CchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHH
Q 038818 181 THSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCD 254 (486)
Q Consensus 181 ~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~ 254 (486)
..+.+...++..|. ++....+-++ |.+.++++|++..++. - ++++.|.+..|..|-..+..+
T Consensus 20 n~~~l~~~l~~~G~---~v~~~~~v~D-----d~~~i~~~i~~~~~~~---D-lvittGG~g~g~~D~t~~ai~ 81 (133)
T cd00758 20 NGPALEALLEDLGC---EVIYAGVVPD-----DADSIRAALIEASREA---D-LVLTTGGTGVGRRDVTPEALA 81 (133)
T ss_pred hHHHHHHHHHHCCC---EEEEeeecCC-----CHHHHHHHHHHHHhcC---C-EEEECCCCCCCCCcchHHHHH
Confidence 44566777788888 7877755432 7788888887665431 2 444445566677777655443
No 445
>PRK05872 short chain dehydrogenase; Provisional
Probab=40.69 E-value=3.1e+02 Score=26.03 Aligned_cols=66 Identities=15% Similarity=0.022 Sum_probs=36.7
Q ss_pred EEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 175 VYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 175 v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
|++..-.........+.++. ...+..+++| --|.+.+++++++..+....+-+|+.++|....+.+
T Consensus 36 V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~ 101 (296)
T PRK05872 36 LALVDLEEAELAALAAELGG-DDRVLTVVAD-----VTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSV 101 (296)
T ss_pred EEEEeCCHHHHHHHHHHhcC-CCcEEEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcCc
Confidence 33333333344555555543 2256666666 347888888887654432234567777776554444
No 446
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=40.61 E-value=52 Score=31.81 Aligned_cols=61 Identities=13% Similarity=0.069 Sum_probs=42.6
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 203 KTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 203 ~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
|.++ ++.+|.+.+++.++...++|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 18 Pf~~--dg~iD~~~l~~li~~l~~~Gv~Gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~ 81 (303)
T PRK03620 18 PFDA--DGSFDEAAYREHLEWLAPYGAAALFAAGGTGEFFSLTPDEYSQVVRAAVETTAGRVPVIA 81 (303)
T ss_pred CCCC--CCCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4443 679999999999999888886666666666666666666667777766543 355544
No 447
>PLN02417 dihydrodipicolinate synthase
Probab=40.30 E-value=58 Score=31.06 Aligned_cols=56 Identities=14% Similarity=0.120 Sum_probs=41.6
Q ss_pred EecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh
Q 038818 202 IKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY 259 (486)
Q Consensus 202 v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~ 259 (486)
-|.++ ++.+|.+.+++.++...++|..-+++..+.|...+-+.+.-.++.+.+.+.
T Consensus 11 TPf~~--~g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~ls~~Er~~~~~~~~~~ 66 (280)
T PLN02417 11 TPYLP--DGRFDLEAYDSLVNMQIENGAEGLIVGGTTGEGQLMSWDEHIMLIGHTVNC 66 (280)
T ss_pred CCcCC--CCCcCHHHHHHHHHHHHHcCCCEEEECccCcchhhCCHHHHHHHHHHHHHH
Confidence 35554 569999999999999888886666666777776666777777777766553
No 448
>cd01991 Asn_Synthase_B_C The C-terminal domain of Asparagine Synthase B. This domain is always found associated n-terminal amidotransferase domain. Family members that contain this domain catalyse the conversion of aspartate to asparagine. Asparagine synthetase B catalyzes the assembly of asparagine from aspartate, Mg(2+)ATP, and glutamine. The three-dimensional architecture of the N-terminal domain of asparagine synthetase B is similar to that observed for glutamine phosphoribosylpyrophosphate amidotransferase while the molecular motif of the C-domain is reminiscent to that observed for GMP synthetase .
Probab=40.09 E-value=3.1e+02 Score=25.47 Aligned_cols=104 Identities=23% Similarity=0.169 Sum_probs=56.9
Q ss_pred ceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCc----hHHHHHHHHcCCCCCCeEEEecCCCCCcccCH
Q 038818 139 GGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTH----SALQKAAQIAGIDPKNFRAIKTTKSSSFTLTP 214 (486)
Q Consensus 139 ~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H----~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~ 214 (486)
-|++.|||-.+...+..+++... .. -....+.....+ .-..+.++.+|+ +.+.+.++ .
T Consensus 18 v~~~LSGGlDSs~va~~~~~~~~------~~-~~~~~~~~~~~~~~e~~~a~~~a~~l~~---~~~~~~~~--------~ 79 (269)
T cd01991 18 VGVLLSGGLDSSLVAALAARLLP------EP-VKTFSIGFGFEGSDEREYARRVAEHLGT---EHHEVEFT--------P 79 (269)
T ss_pred eEEeecccHHHHHHHHHHHHhhC------CC-CceEEEeeCCCCCChHHHHHHHHHHhCC---cceEEEcC--------H
Confidence 68999999998877665554320 00 012222222222 225667888898 77777654 2
Q ss_pred HHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccc
Q 038818 215 ESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 215 ~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
+.+.+.+.........|. .....-++..+.+.++++++.++++|-.
T Consensus 80 ~~~~~~~~~~~~~~~~p~---------~~~~~~~~~~l~~~a~~~~~~v~l~G~g 125 (269)
T cd01991 80 ADLLAALPDVIWELDEPF---------ADSSAIPLYLLSRLARKHGIKVVLSGEG 125 (269)
T ss_pred HHHHHHHHHHHHHhCCCC---------CCcHHHHHHHHHHHHHHhCCEEEEecCC
Confidence 334333332211111121 1122246678899999999888888754
No 449
>PRK11633 cell division protein DedD; Provisional
Probab=40.09 E-value=1.3e+02 Score=27.58 Aligned_cols=52 Identities=10% Similarity=0.115 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHhcCc-EEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 426 ELNRKLLESINASGQ-LYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 426 ~~~~~l~~~l~~~g~-~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
+..+.|..+|...|+ .++......+..+.|+-+ .|+.+++++++....|+++
T Consensus 161 ~~A~~l~~kL~~~G~~Ay~~~~~~~~G~~tRV~V-GP~~sk~~ae~~~~~Lk~~ 213 (226)
T PRK11633 161 DKVNEIVAKLRLSGYRVYTVPSTPVQGKITRIYV-GPDASKDKLKGSLGELKQL 213 (226)
T ss_pred HHHHHHHHHHHHCCCeeEEEeeecCCCcEEEEEe-CCCCCHHHHHHHHHHHHHh
Confidence 335678888988997 344333222234678877 5899999999999999885
No 450
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=39.06 E-value=1.1e+02 Score=26.58 Aligned_cols=56 Identities=25% Similarity=0.221 Sum_probs=40.7
Q ss_pred ccCHHHHHHHHHHHHHCCCccEEEEeecCC-c------------cccccCCchHHHHHHHHhCceEEee
Q 038818 211 TLTPESLQAAIDLDIQAGLIPLFLCATVGT-T------------AITTVDPLGPLCDIAKRYSIWVHVD 266 (486)
Q Consensus 211 ~~d~~~L~~~l~~~~~~g~~p~~vv~~~gt-t------------~~G~idpl~~I~~i~~~~g~~lhvD 266 (486)
.++.++.++.++.-.+-|...+++.-+.-. . ..+..|+|+.+.+.|+++|+.|++-
T Consensus 16 ~~~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmkv~~G 84 (166)
T PF14488_consen 16 NWTPAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMKVFVG 84 (166)
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCEEEEe
Confidence 778888888888887777666544433211 1 1134578999999999999999984
No 451
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=39.04 E-value=49 Score=31.95 Aligned_cols=58 Identities=14% Similarity=0.079 Sum_probs=41.3
Q ss_pred ccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc-CCchHHHHHHHHhCceEEeeccc
Q 038818 211 TLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV-DPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 211 ~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i-dpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
.++.+++++.++.-.+. ....-+++.+|+-|.|.- |-..+|.++|++.|+.+++|..-
T Consensus 110 ~is~~~~~~~l~~~~~~-l~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 110 EISEAELEQFLEQLKAL-LESDDIVVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred CCCHHHHHHHHHHHHHh-cccCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECCh
Confidence 66777777766654331 111235667788888866 56899999999999999999754
No 452
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=38.68 E-value=58 Score=31.16 Aligned_cols=61 Identities=20% Similarity=0.166 Sum_probs=40.4
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 203 KTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 203 ~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
|.++ ++.+|.+.+++.++...+.|..-+++..+.|....-+.+.-.+|.+++.++ ++.+++
T Consensus 12 Pf~~--dg~id~~~~~~~i~~l~~~Gv~gl~~~GstGE~~~Lt~~Er~~l~~~~~~~~~~~~~vi~ 75 (289)
T PF00701_consen 12 PFNA--DGSIDEDALKRLIDFLIEAGVDGLVVLGSTGEFYSLTDEERKELLEIVVEAAAGRVPVIA 75 (289)
T ss_dssp -BET--TSSB-HHHHHHHHHHHHHTTSSEEEESSTTTTGGGS-HHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCC--CcCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHccCceEEEe
Confidence 4443 568999999999998888876665555666666666667777777776653 355554
No 453
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=38.58 E-value=1.5e+02 Score=28.07 Aligned_cols=52 Identities=17% Similarity=0.078 Sum_probs=37.8
Q ss_pred CccccccCCchHHHHHHHHhCce--EEe-eccccchhccCccchhhhcCCCCCCceeeccccccC
Q 038818 240 TTAITTVDPLGPLCDIAKRYSIW--VHV-DAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFF 301 (486)
Q Consensus 240 tt~~G~idpl~~I~~i~~~~g~~--lhv-D~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~ 301 (486)
.|+-|.++--.+|+.+.+++... ++| +-|.+++.+.+- .+|-|.++++-.++
T Consensus 98 ~TpGG~v~AA~~I~~~l~~~~~~v~v~VP~~A~SAGTlIAL----------aADeIvM~p~a~LG 152 (285)
T PF01972_consen 98 HTPGGLVDAAEQIARALREHPAKVTVIVPHYAMSAGTLIAL----------AADEIVMGPGAVLG 152 (285)
T ss_pred ECCCCcHHHHHHHHHHHHhCCCCEEEEECcccccHHHHHHH----------hCCeEEECCCCccC
Confidence 57889999999999999998643 333 456666544321 68888888887776
No 454
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=38.33 E-value=76 Score=28.94 Aligned_cols=48 Identities=19% Similarity=0.136 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceE
Q 038818 215 ESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWV 263 (486)
Q Consensus 215 ~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~l 263 (486)
-+-|..++=..-.|..|..|++..- +..|..-..+++.++|++||+.+
T Consensus 153 GHTEaavdLa~lAGl~p~~vicEil-~~dG~ma~~~~l~~fA~~h~l~~ 200 (218)
T PRK00910 153 GHTEGTVDLMQMAGLQPAGVLCELT-NPDGTMAKTPEIIAFGKLHNMPV 200 (218)
T ss_pred CccHHHHHHHHHcCCCceEEEEEEe-cCCCCcCCHHHHHHHHHHcCCcE
Confidence 3456666655667888877777764 35699999999999999999988
No 455
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=38.28 E-value=1.1e+02 Score=31.91 Aligned_cols=63 Identities=11% Similarity=0.063 Sum_probs=42.9
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh--CceEEeeccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY--SIWVHVDAAYAG 271 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~--g~~lhvD~a~g~ 271 (486)
+|..++... ..++.+++.+.|.+.. |-+|.++. .+..+....++++.+|+. ++.+++=|.|..
T Consensus 39 ~V~iiD~~~---~~~~~~~~~~~l~~~~-----pdvVgis~---~t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t 103 (497)
T TIGR02026 39 DVTFLDAMT---GPLTDEKLVERLRAHC-----PDLVLITA---ITPAIYIACETLKFARERLPNAIIVLGGIHPT 103 (497)
T ss_pred ceEEecccc---cCCCHHHHHHHHHhcC-----cCEEEEec---CcccHHHHHHHHHHHHHHCCCCEEEEcCCCcC
Confidence 677776542 3677788888776532 44555543 234566778888988887 899998887744
No 456
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=37.52 E-value=78 Score=29.08 Aligned_cols=51 Identities=20% Similarity=0.145 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeec
Q 038818 215 ESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDA 267 (486)
Q Consensus 215 ~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~ 267 (486)
-+-|..++=..-.|..|..|++.. -+..|..-..+++.++|++||+.+ ++.
T Consensus 157 GHTEAavdLa~lAGl~P~~vicEi-l~~dG~ma~~~~l~~fA~~~~l~i-isi 207 (230)
T PRK00014 157 GHTEGSVDLAALAGLRPAGVLCEL-MNADGTMMRGASLERYAAKEGLVA-LAI 207 (230)
T ss_pred CccHHHHHHHHHcCCCceEEEEEE-eCCCCCccCHHHHHHHHHHcCCcE-EEH
Confidence 344555555555677787777776 445699999999999999999988 443
No 457
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=37.35 E-value=71 Score=30.71 Aligned_cols=56 Identities=16% Similarity=0.183 Sum_probs=41.0
Q ss_pred EEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHH
Q 038818 201 AIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKR 258 (486)
Q Consensus 201 ~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~ 258 (486)
.-|.++ ++.+|.+.+++.++...++|..-+++..+.|...+-+.+.-.++.+.+.+
T Consensus 9 ~TPf~~--dg~iD~~~l~~lv~~~~~~Gv~gi~v~GstGE~~~Ls~~Er~~l~~~~~~ 64 (294)
T TIGR02313 9 ITPFKR--NGDIDEEALRELIEFQIEGGSHAISVGGTSGEPGSLTLEERKQAIENAID 64 (294)
T ss_pred eCCcCC--CCCcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHH
Confidence 345554 57999999999999988888666666666666666666777777776544
No 458
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=37.15 E-value=2.4e+02 Score=26.59 Aligned_cols=68 Identities=24% Similarity=0.301 Sum_probs=42.7
Q ss_pred HHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHHHHHHh
Q 038818 184 ALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCDIAKRY 259 (486)
Q Consensus 184 s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~i~~~~ 259 (486)
.+.+.|+..|+ .++.+-.. .-+.+.|++..+.. +| +|.+.+-+-.||.-.+ +.++.+-.|++
T Consensus 138 ~~~~~~~~~gi---~~I~lvaP-----tt~~~rl~~i~~~a--~G----FiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~ 203 (265)
T COG0159 138 ELLKAAEKHGI---DPIFLVAP-----TTPDERLKKIAEAA--SG----FIYYVSRMGVTGARNPVSADVKELVKRVRKY 203 (265)
T ss_pred HHHHHHHHcCC---cEEEEeCC-----CCCHHHHHHHHHhC--CC----cEEEEecccccCCCcccchhHHHHHHHHHHh
Confidence 37888898999 77766433 23556676655432 23 4555555556787766 66666666765
Q ss_pred -CceEEe
Q 038818 260 -SIWVHV 265 (486)
Q Consensus 260 -g~~lhv 265 (486)
++++.|
T Consensus 204 ~~~Pv~v 210 (265)
T COG0159 204 TDVPVLV 210 (265)
T ss_pred cCCCeEE
Confidence 566655
No 459
>COG0722 AroG 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
Probab=37.08 E-value=2e+02 Score=27.77 Aligned_cols=26 Identities=27% Similarity=0.302 Sum_probs=19.6
Q ss_pred ccCHHHHHHHHHHHHHCCCccEEEEe
Q 038818 211 TLTPESLQAAIDLDIQAGLIPLFLCA 236 (486)
Q Consensus 211 ~~d~~~L~~~l~~~~~~g~~p~~vv~ 236 (486)
..|.+.+.++.+.-.+.|..|.++|-
T Consensus 241 NYda~~v~~~~~~l~~~gl~~~lmID 266 (351)
T COG0722 241 NYDAASVAAACEQLEKAGLPPRLMID 266 (351)
T ss_pred CCCHHHHHHHHHHHHHcCCCCeEEEe
Confidence 56888888888888788877765443
No 460
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=37.02 E-value=47 Score=26.42 Aligned_cols=49 Identities=14% Similarity=0.094 Sum_probs=38.0
Q ss_pred cccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEee
Q 038818 210 FTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVD 266 (486)
Q Consensus 210 ~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD 266 (486)
.++++++|++.+.+... .++ .||..+|.+.=.++..+++++.++-+++-
T Consensus 47 Hkl~~eEle~~lee~~E------~iv--vGTG~~G~l~l~~ea~e~~r~k~~~vi~~ 95 (121)
T COG1504 47 HKLALEELEELLEEGPE------VIV--VGTGQSGMLELSEEAREFFRKKGCEVIEL 95 (121)
T ss_pred cccCHHHHHHHHhcCCc------EEE--EecCceeEEEeCHHHHHHHHhcCCeEEEe
Confidence 48999999999997643 232 35556788888899999999999777653
No 461
>TIGR00177 molyb_syn molybdenum cofactor synthesis domain. The Drosophila protein cinnamon, the Arabidopsis protein cnx1, and rat protein gephyrin each have one domain like MoeA and one like MoaB and Mog. These domains are, however, distantly related to each other, as captured by this model. Gephyrin is unusual in that it seems to be a tubulin-binding neuroprotein involved in the clustering of both blycine receptors and GABA receptors, rather than a protein of molybdenum cofactor biosynthesis.
Probab=36.90 E-value=2.5e+02 Score=23.57 Aligned_cols=63 Identities=16% Similarity=0.211 Sum_probs=40.2
Q ss_pred CCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHH
Q 038818 180 QTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCD 254 (486)
Q Consensus 180 ~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~ 254 (486)
..-+.+...++.+|+ ++....+-.+ |.+.|.++|++..++ .-+|+.+ |.+..|.-|-..+..+
T Consensus 27 ~n~~~l~~~l~~~G~---~v~~~~~v~D-----d~~~i~~~l~~~~~~---~DliItt-GG~g~g~~D~t~~ai~ 89 (144)
T TIGR00177 27 SNGPLLAALLEEAGF---NVSRLGIVPD-----DPEEIREILRKAVDE---ADVVLTT-GGTGVGPRDVTPEALE 89 (144)
T ss_pred CcHHHHHHHHHHCCC---eEEEEeecCC-----CHHHHHHHHHHHHhC---CCEEEEC-CCCCCCCCccHHHHHH
Confidence 345567777888898 8887765432 678888888765432 2245555 5555677666555443
No 462
>PF00733 Asn_synthase: Asparagine synthase; InterPro: IPR001962 This domain is always found associated with (IPR000583 from INTERPRO). Family members that contain this domain catalyse the conversion of aspartate to asparagine. Asparagine synthetase B (6.3.5.4 from EC) catalyzes the assembly of asparagine from aspartate, Mg(2+)ATP, and glutamine. The three-dimensional architecture of the N-terminal domain of asparagine synthetase B is similar to that observed for glutamine phosphoribosylpyrophosphate amidotransferase while the molecular motif of the C-domain is reminiscent to that observed for GMP synthetase [].; GO: 0004066 asparagine synthase (glutamine-hydrolyzing) activity, 0006529 asparagine biosynthetic process; PDB: 1JGT_A 1M1Z_B 1MB9_B 1MBZ_B 1MC1_A 1Q15_D 1Q19_C 1CT9_C 3K32_F.
Probab=36.73 E-value=1e+02 Score=28.32 Aligned_cols=123 Identities=20% Similarity=0.178 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEE--ecCCCch----HHHH
Q 038818 114 LENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVY--GSDQTHS----ALQK 187 (486)
Q Consensus 114 le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~--~s~~~H~----s~~~ 187 (486)
+.+.+.+-+.+.+..... .++..|||..+...+..+++.. .++...+ ....... -..+
T Consensus 2 ~r~~l~~av~~rl~~~~~-------i~~~LSGGlDSs~i~~~~~~~~---------~~~~~~~t~~~~~~~~~e~~~a~~ 65 (255)
T PF00733_consen 2 LRELLEEAVARRLRSDKP-------IGILLSGGLDSSAIAALAARQG---------GPPIKTFTIGFEDDDYDEREYARK 65 (255)
T ss_dssp HHHHHHHHHHHHCGCTSE-------EEEE--SSHHHHHHHHHHHHTC---------CSEEEEEEEECSSCC--HHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCC-------EEEECCCChhHHHHHHHHHHhh---------CCceeEEEEEcCCCcchhHHHHHH
Confidence 344444555565543332 6899999999987776666511 0222222 2222221 2466
Q ss_pred HHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeec
Q 038818 188 AAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDA 267 (486)
Q Consensus 188 a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~ 267 (486)
.++.+|+ ..+.+..+ .+.+...+.+....-..|... .....-+...+.+.+++.|+-++++|
T Consensus 66 va~~~~~---~~~~~~~~--------~~~~~~~~~~~~~~~~~p~~~-------~~~~~~~~~~~~~~a~~~~~~~~ltG 127 (255)
T PF00733_consen 66 VARHLGL---EHHEIELD--------PEDLLDNLEDIIWRLDGPSPL-------DDPNSLPLYLLARLARENGIRVLLTG 127 (255)
T ss_dssp HHHHHT----EEEEEEE---------HHHHHHHHHHHHHHHT---HH-------HHHHHHHHHHHHHHHCHTTBSEEE--
T ss_pred Hhccccc---ccceeeec--------hhhHHHhHHHHHHHHhCCccc-------ccccccHHHHHHHhhcccceeEEEec
Confidence 7888898 77777654 333333333322100011100 01122345567778888899999998
Q ss_pred ccc
Q 038818 268 AYA 270 (486)
Q Consensus 268 a~g 270 (486)
--|
T Consensus 128 ~Gg 130 (255)
T PF00733_consen 128 QGG 130 (255)
T ss_dssp TTH
T ss_pred ccc
Confidence 543
No 463
>KOG0622 consensus Ornithine decarboxylase [Amino acid transport and metabolism]
Probab=36.57 E-value=2.1e+02 Score=28.71 Aligned_cols=82 Identities=23% Similarity=0.252 Sum_probs=48.6
Q ss_pred CCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc------
Q 038818 171 SRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT------ 244 (486)
Q Consensus 171 ~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G------ 244 (486)
|.-+||++..--.|..+-|...|+ .+-.++ +.+.|.+..+..... ..++-+++--++.+|
T Consensus 123 P~riIyanpcK~~s~IkyAa~~gV---~~~tfD---------ne~el~kv~~~hP~a--~llLrIatdds~a~~~l~~KF 188 (448)
T KOG0622|consen 123 PERIIYANPCKQVSQIKYAAKHGV---SVMTFD---------NEEELEKVAKSHPNA--NLLLRIATDDSTATCRLNLKF 188 (448)
T ss_pred hHHeEecCCCccHHHHHHHHHcCC---eEEeec---------CHHHHHHHHHhCCCc--eEEEEEccCCCcccccccCcc
Confidence 555777777777788888888888 666643 234555544433221 112233333333344
Q ss_pred --ccCCchHHHHHHHHhC-----ceEEee
Q 038818 245 --TVDPLGPLCDIAKRYS-----IWVHVD 266 (486)
Q Consensus 245 --~idpl~~I~~i~~~~g-----~~lhvD 266 (486)
..+.++.|.+.+|+++ +.+||-
T Consensus 189 G~~~~~~~~lLd~ak~l~lnvvGvsfHvG 217 (448)
T KOG0622|consen 189 GCSLDNCRHLLDMAKELELNVVGVSFHVG 217 (448)
T ss_pred CCCHHHHHHHHHHHHHcCceEEEEEEEec
Confidence 2367888889999985 566764
No 464
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=36.24 E-value=84 Score=28.55 Aligned_cols=50 Identities=20% Similarity=0.188 Sum_probs=39.6
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceE
Q 038818 213 TPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWV 263 (486)
Q Consensus 213 d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~l 263 (486)
..-+-|..++=..-.|..|..|++..- +..|..-+.+++.+++++||+.+
T Consensus 150 R~GHTEaavdLa~lAGl~p~~vicEil-~~dG~ma~~~~~~~fA~~~~l~~ 199 (214)
T PRK01792 150 RRGHTEAAVDLARLAGYKEAGVICEIT-NDDGTMARTPEIVEFAKKFGYAV 199 (214)
T ss_pred CCChHHHHHHHHHHcCCCceEEEEEEe-cCCCCccCHHHHHHHHHHcCCcE
Confidence 444567777766667888887777764 46699999999999999999988
No 465
>CHL00073 chlN photochlorophyllide reductase subunit N
Probab=36.18 E-value=71 Score=32.82 Aligned_cols=52 Identities=10% Similarity=-0.058 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeecCCcccccc-CCchHHHHHHH-HhCceEEee
Q 038818 213 TPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV-DPLGPLCDIAK-RYSIWVHVD 266 (486)
Q Consensus 213 d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i-dpl~~I~~i~~-~~g~~lhvD 266 (486)
+-+.|+++|.+-.++..+..+++.+.+ ++|.| |||+.+++-++ ++|++++.=
T Consensus 81 ~~~~L~~~i~ei~~~~~p~~ifv~~TC--~t~iIGdDle~va~~~~~~~gipVV~v 134 (457)
T CHL00073 81 DYEELKRLCLQIKKDRNPSVIVWIGTC--TTEIIKMDLEGMAPKLEAEIGIPIVVA 134 (457)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEEccC--cHHhhccCHHHHHHHHHHhhCCCEEEE
Confidence 457899999887766543444444333 34666 99999987554 789887653
No 466
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=35.87 E-value=77 Score=30.40 Aligned_cols=61 Identities=16% Similarity=0.183 Sum_probs=41.0
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHHCC-CccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 203 KTTKSSSFTLTPESLQAAIDLDIQAG-LIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 203 ~~d~~~~~~~d~~~L~~~l~~~~~~g-~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
|.++ ++++|.+.+++.++...+.| ..-+++..+.|....-+.+.-.++.+.+.+. .+.+++
T Consensus 11 Pf~~--dg~iD~~~~~~~i~~~i~~G~v~gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~ 75 (290)
T TIGR00683 11 SFNE--DGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIA 75 (290)
T ss_pred CCCC--CCCcCHHHHHHHHHHHHhCCCcCEEEECCcccccccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4554 56999999999999888877 5555555565655555566666777666554 345444
No 467
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=35.76 E-value=1.6e+02 Score=26.39 Aligned_cols=91 Identities=20% Similarity=0.279 Sum_probs=48.4
Q ss_pred CCeEEEecCCCchH----HHHHHHHcCCCCCCeEEEecCCCCCcccCH-HHHHHHHHHHHHCCCccEEEEeecCCccc--
Q 038818 171 SRLVVYGSDQTHSA----LQKAAQIAGIDPKNFRAIKTTKSSSFTLTP-ESLQAAIDLDIQAGLIPLFLCATVGTTAI-- 243 (486)
Q Consensus 171 ~~~~v~~s~~~H~s----~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~-~~L~~~l~~~~~~g~~p~~vv~~~gtt~~-- 243 (486)
.+..+++.+..... ....++.+|+ .+..... ..|+ +.+++.+++...++.. .+++-|.|-++.
T Consensus 30 ~~v~lis~D~~R~ga~eQL~~~a~~l~v---p~~~~~~------~~~~~~~~~~~l~~~~~~~~D-~vlIDT~Gr~~~d~ 99 (196)
T PF00448_consen 30 KKVALISADTYRIGAVEQLKTYAEILGV---PFYVART------ESDPAEIAREALEKFRKKGYD-LVLIDTAGRSPRDE 99 (196)
T ss_dssp --EEEEEESTSSTHHHHHHHHHHHHHTE---EEEESST------TSCHHHHHHHHHHHHHHTTSS-EEEEEE-SSSSTHH
T ss_pred ccceeecCCCCCccHHHHHHHHHHHhcc---ccchhhc------chhhHHHHHHHHHHHhhcCCC-EEEEecCCcchhhH
Confidence 34444444444333 4555788887 5544432 2244 4455667665544333 357777775542
Q ss_pred cccCCchHHHHHHHHhCceEEeeccccc
Q 038818 244 TTVDPLGPLCDIAKRYSIWVHVDAAYAG 271 (486)
Q Consensus 244 G~idpl~~I~~i~~~~g~~lhvD~a~g~ 271 (486)
-.++.++++.+......++|++|+..+.
T Consensus 100 ~~~~el~~~~~~~~~~~~~LVlsa~~~~ 127 (196)
T PF00448_consen 100 ELLEELKKLLEALNPDEVHLVLSATMGQ 127 (196)
T ss_dssp HHHHHHHHHHHHHSSSEEEEEEEGGGGG
T ss_pred HHHHHHHHHhhhcCCccceEEEecccCh
Confidence 2334455555555555689999987644
No 468
>cd02007 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis. Terpeniods are plant natural products with important pharmaceutical activity. DXS catalyzes a transketolase-type condensation of pyruvate with D-glyceraldehyde-3-phosphate to form 1-deoxy-D-xylulose-5-phosphate (DXP) and carbon dioxide. The formation of DXP leads to the formation of the terpene precursor IPP (isopentyl diphosphate) and to the formation of thiamine (vitamin B1) and pyridoxal (vitamin B6).
Probab=35.75 E-value=3e+02 Score=24.53 Aligned_cols=24 Identities=17% Similarity=0.058 Sum_probs=16.7
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEee
Q 038818 213 TPESLQAAIDLDIQAGLIPLFLCAT 237 (486)
Q Consensus 213 d~~~L~~~l~~~~~~g~~p~~vv~~ 237 (486)
|++++.+++++..+ ...|.+|.+.
T Consensus 165 d~~~l~~a~~~a~~-~~~P~~I~~~ 188 (195)
T cd02007 165 NIEALIKVLKEVKD-LKGPVLLHVV 188 (195)
T ss_pred CHHHHHHHHHHHHh-CCCCEEEEEE
Confidence 88999999887654 3457665553
No 469
>TIGR01274 ACC_deam 1-aminocyclopropane-1-carboxylate deaminase. This pyridoxal phosphate-dependent enzyme degrades 1-aminocyclopropane-1-carboxylate, which in plants is a precursor of the ripening hormone ethylene, to ammonia and alpha-ketoglutarate. This model includes all members of this family for which function has been demonstrated experimentally, but excludes a closely related family often annotated as putative members of this family.
Probab=35.54 E-value=2.1e+02 Score=28.04 Aligned_cols=57 Identities=11% Similarity=-0.007 Sum_probs=32.0
Q ss_pred ceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCC--c------hHHHHHHHHcCCCCCCeEEEecC
Q 038818 139 GGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQT--H------SALQKAAQIAGIDPKNFRAIKTT 205 (486)
Q Consensus 139 ~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~--H------~s~~~a~~~~G~g~~~v~~v~~d 205 (486)
..+++.||+.+|.....++..+. .| -+.+|+++... + ......++.+|. +|+.++.+
T Consensus 67 ~~vvs~ggs~gN~g~alA~~a~~------~G-l~~~iv~~~~~~~~~~~~~~~~~~~~~~~~GA---~v~~v~~~ 131 (337)
T TIGR01274 67 TTLVSIGGIQSNQTRQVAAVAAH------LG-MKCVLVQENWVNYSDAVYDRVGNIQLSRIMGA---DVRLDPDG 131 (337)
T ss_pred CEEEECCCCcchHHHHHHHHHHH------cC-CcEEEEeccCCCccccchhccchHHHHHHcCC---EEEEeCCc
Confidence 34677777777754333222211 12 24556666532 1 245556788999 99988754
No 470
>smart00852 MoCF_biosynth Probable molybdopterin binding domain. This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor. The domain is presumed to bind molybdopterin. The structure of this domain is known, and it forms an alpha/beta structure. In the known structure of Gephyrin this domain mediates trimerisation.
Probab=35.47 E-value=2.3e+02 Score=23.34 Aligned_cols=62 Identities=16% Similarity=0.125 Sum_probs=39.0
Q ss_pred CCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHH
Q 038818 180 QTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLC 253 (486)
Q Consensus 180 ~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~ 253 (486)
...+.+.+.++..|. +++...+-. + |.+.+++.|++..+. .-+|+.+.| +..|..|-..+..
T Consensus 18 ~~~~~l~~~l~~~G~---~~~~~~~v~-D----d~~~I~~~l~~~~~~---~dliittGG-~g~g~~D~t~~~l 79 (135)
T smart00852 18 SNGPALAELLTELGI---EVTRYVIVP-D----DKEAIKEALREALER---ADLVITTGG-TGPGPDDVTPEAV 79 (135)
T ss_pred CcHHHHHHHHHHCCC---eEEEEEEeC-C----CHHHHHHHHHHHHhC---CCEEEEcCC-CCCCCCcCcHHHH
Confidence 344567778888898 766555433 2 788888888776543 224555544 4467777766544
No 471
>PF12818 Tegument_dsDNA: dsDNA viral tegument protein; InterPro: IPR024346 This entry represents the N-terminal domain of tegument proteins from double-stranded DNA herpesvirus.
Probab=35.43 E-value=4e+02 Score=25.43 Aligned_cols=54 Identities=15% Similarity=0.116 Sum_probs=32.1
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeecCCc---cccc-cCCchHHHHHHHHhCceEEee
Q 038818 213 TPESLQAAIDLDIQAGLIPLFLCATVGTT---AITT-VDPLGPLCDIAKRYSIWVHVD 266 (486)
Q Consensus 213 d~~~L~~~l~~~~~~g~~p~~vv~~~gtt---~~G~-idpl~~I~~i~~~~g~~lhvD 266 (486)
+.+.+++.|+..-=+-..+.+.++...++ +++. +.|++.|..+|+.+|+.+++=
T Consensus 216 ~~~~~~~~i~~~FLNv~~~~vfl~V~n~~~~~~~~~~~~~l~~L~~~c~~~gc~~~iL 273 (282)
T PF12818_consen 216 NREHNEEIIKQHFLNVYCSVVFLVVSNTPIDTNTDQGFGPLDALKRACRLCGCPVHIL 273 (282)
T ss_pred hHHHHHHHHHhhhhccccceEEEEEecCCCCCcccccccHHHHHHHHHHHCCCCEEEE
Confidence 34457777776432222222222222222 3444 489999999999999998874
No 472
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=35.22 E-value=2.7e+02 Score=28.21 Aligned_cols=58 Identities=10% Similarity=0.142 Sum_probs=34.2
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHH---hCceEEeeccccc
Q 038818 213 TPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKR---YSIWVHVDAAYAG 271 (486)
Q Consensus 213 d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~---~g~~lhvD~a~g~ 271 (486)
+++++.++|.........-++++-|.|.+.. ..+-+.++.++.++ +.+.|++|++...
T Consensus 304 d~~~L~~aL~~lk~~~~~DvVLIDTaGRs~k-d~~lm~EL~~~lk~~~PdevlLVLsATtk~ 364 (436)
T PRK11889 304 DEAAMTRALTYFKEEARVDYILIDTAGKNYR-ASETVEEMIETMGQVEPDYICLTLSASMKS 364 (436)
T ss_pred CHHHHHHHHHHHHhccCCCEEEEeCccccCc-CHHHHHHHHHHHhhcCCCeEEEEECCccCh
Confidence 6778888886654321123567778776652 22335555555544 4577888886544
No 473
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=34.48 E-value=2.5e+02 Score=28.18 Aligned_cols=131 Identities=15% Similarity=0.123 Sum_probs=68.0
Q ss_pred eEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHH
Q 038818 140 GVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQA 219 (486)
Q Consensus 140 ~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~ 219 (486)
+++-++|.-+-..|-.++++ ....|++-+-+-.+..++....+- ++....+| ..|.++|.+
T Consensus 4 ilviGaG~Vg~~va~~la~~-----------~d~~V~iAdRs~~~~~~i~~~~~~---~v~~~~vD-----~~d~~al~~ 64 (389)
T COG1748 4 ILVIGAGGVGSVVAHKLAQN-----------GDGEVTIADRSKEKCARIAELIGG---KVEALQVD-----AADVDALVA 64 (389)
T ss_pred EEEECCchhHHHHHHHHHhC-----------CCceEEEEeCCHHHHHHHHhhccc---cceeEEec-----ccChHHHHH
Confidence 45556666666555555554 223344333333333444333333 56666666 458999999
Q ss_pred HHHHHHHCCCccEEEEeecCCccc----------cc--------cCCchHHHHHHHHhCceEEeeccccchh--ccC-cc
Q 038818 220 AIDLDIQAGLIPLFLCATVGTTAI----------TT--------VDPLGPLCDIAKRYSIWVHVDAAYAGSA--CIC-PE 278 (486)
Q Consensus 220 ~l~~~~~~g~~p~~vv~~~gtt~~----------G~--------idpl~~I~~i~~~~g~~lhvD~a~g~~~--~~~-~~ 278 (486)
+|++. . +|+-..+.+.. |. .++..++.+.|++.|+-.+.+.-..-+. .+. ..
T Consensus 65 li~~~-d------~VIn~~p~~~~~~i~ka~i~~gv~yvDts~~~~~~~~~~~~a~~Agit~v~~~G~dPGi~nv~a~~a 137 (389)
T COG1748 65 LIKDF-D------LVINAAPPFVDLTILKACIKTGVDYVDTSYYEEPPWKLDEEAKKAGITAVLGCGFDPGITNVLAAYA 137 (389)
T ss_pred HHhcC-C------EEEEeCCchhhHHHHHHHHHhCCCEEEcccCCchhhhhhHHHHHcCeEEEcccCcCcchHHHHHHHH
Confidence 99875 1 34433333221 11 1233667777777787777775322111 000 11
Q ss_pred chhhhcCCCCCCceeecc
Q 038818 279 FRHFIDGIEGADSFSLNA 296 (486)
Q Consensus 279 ~~~~~~~~~~aDsi~~~~ 296 (486)
.++..+.++.+|++..+.
T Consensus 138 ~~~~~~~i~si~iy~g~~ 155 (389)
T COG1748 138 AKELFDEIESIDIYVGGL 155 (389)
T ss_pred HHHhhccccEEEEEEecC
Confidence 223333567788887775
No 474
>TIGR00381 cdhD CO dehydrogenase/acetyl-CoA synthase, delta subunit. This is the small subunit of a heterodimer which catalyzes the reaction CO + H2O + Acceptor = CO2 + Reduced acceptor and is involved in the synthesis of acetyl-CoA from CO2 and H2.
Probab=34.23 E-value=2e+02 Score=28.63 Aligned_cols=47 Identities=23% Similarity=0.254 Sum_probs=34.0
Q ss_pred ccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC-CchHHHHHHHHhCceEEeec
Q 038818 211 TLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD-PLGPLCDIAKRYSIWVHVDA 267 (486)
Q Consensus 211 ~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id-pl~~I~~i~~~~g~~lhvD~ 267 (486)
.-|++.|++.++.. +|.+|++-.++ .+ +.++++++|++||..+++=+
T Consensus 200 ~kD~eVLeaaLe~~--~G~kpLL~SAt--------~e~Ny~~ia~lAk~yg~~Vvv~s 247 (389)
T TIGR00381 200 EKDPLVLEKAAEVA--EGERCLLASAN--------LDLDYEKIANAAKKYGHVVLSWT 247 (389)
T ss_pred cCCHHHHHHHHHHh--CCCCcEEEecC--------chhhHHHHHHHHHHhCCeEEEEc
Confidence 56999999998865 35556542222 23 78999999999999887754
No 475
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=33.92 E-value=46 Score=27.48 Aligned_cols=48 Identities=21% Similarity=0.273 Sum_probs=29.2
Q ss_pred ccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEee
Q 038818 211 TLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVD 266 (486)
Q Consensus 211 ~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD 266 (486)
.++.+..++.+++--+ ...| +|+++.+. .|-+++.++|+++++++..=
T Consensus 64 ~l~~~~r~~~l~~l~~-~~~P-~iIvt~~~------~~p~~l~e~a~~~~ipll~t 111 (127)
T PF02603_consen 64 SLDEEERKERLEKLFS-YNPP-CIIVTRGL------EPPPELIELAEKYNIPLLRT 111 (127)
T ss_dssp CS-HHHHCCHHHHHCT-TT-S--EEEETTT---------HHHHHHHHHCT--EEEE
T ss_pred HCCHHHHHHHHHHHhC-CCCC-EEEEECcC------CCCHHHHHHHHHhCCcEEEc
Confidence 6788888788777654 3345 46665443 78899999999999988653
No 476
>PRK03353 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=33.90 E-value=97 Score=28.30 Aligned_cols=51 Identities=24% Similarity=0.159 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeec
Q 038818 215 ESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDA 267 (486)
Q Consensus 215 ~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~ 267 (486)
.+-|.+++=.+-.|..|..|++..- +..|...+.+++.++|++||+.+ ++.
T Consensus 152 GhtEaavdLa~lAgl~P~avi~ei~-~~~G~~~~~~~~~~fA~~~~l~~-v~i 202 (217)
T PRK03353 152 GHTEATIDLMTLAGLKPAGVLCELT-NDDGTMARAPECIAFAKQHNMPV-LTI 202 (217)
T ss_pred CchHHHHHHHHHcCCCceEEEEEee-cCCCCcccHHHHHHHHHHcCCcE-EEH
Confidence 3456666666667888887777663 35699999999999999999988 553
No 477
>PRK05876 short chain dehydrogenase; Provisional
Probab=33.81 E-value=4e+02 Score=24.93 Aligned_cols=44 Identities=7% Similarity=-0.023 Sum_probs=26.8
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..+++| --|.+.+++++++..+....+-+|+-++|....|.+
T Consensus 56 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~ 99 (275)
T PRK05876 56 DVHGVMCD-----VRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPI 99 (275)
T ss_pred eEEEEeCC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCc
Confidence 67777776 347888888887654432234456666665544444
No 478
>PF06415 iPGM_N: BPG-independent PGAM N-terminus (iPGM_N); InterPro: IPR011258 This family represents the N-terminal region of the 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (or phosphoglyceromutase or BPG-independent PGAM) protein (5.4.2.1 from EC). The family is found in conjunction with Metalloenzyme (located in the C-terminal region of the protein). ; GO: 0004619 phosphoglycerate mutase activity, 0030145 manganese ion binding, 0006007 glucose catabolic process, 0005737 cytoplasm; PDB: 1EQJ_A 1EJJ_A 1O99_A 1O98_A 3IGZ_B 3IGY_B 3NVL_A 2IFY_A.
Probab=33.81 E-value=59 Score=29.77 Aligned_cols=48 Identities=19% Similarity=0.141 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCc
Q 038818 214 PESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSI 261 (486)
Q Consensus 214 ~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~ 261 (486)
-+.|.++++...+++...-++-+.+.......++-|.+|.++|+++|+
T Consensus 13 n~~l~~~~~~~k~~~~~lHl~GLlSdGGVHSh~~Hl~al~~~a~~~gv 60 (223)
T PF06415_consen 13 NPVLLEAIEHAKKNGGRLHLMGLLSDGGVHSHIDHLFALIKLAKKQGV 60 (223)
T ss_dssp SHHHHHHHHHHCCTT--EEEEEEESS-SSS--HHHHHHHHHHHHHTT-
T ss_pred CHHHHHHHHHHHhcCCeEEEEEEecCCCccccHHHHHHHHHHHHHcCC
Confidence 367778887766554433233333334445567889999999999883
No 479
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=33.71 E-value=3.1e+02 Score=26.34 Aligned_cols=59 Identities=14% Similarity=0.181 Sum_probs=40.3
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc--CC-----chHHHHHHHHhCc--eEEeec
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV--DP-----LGPLCDIAKRYSI--WVHVDA 267 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i--dp-----l~~I~~i~~~~g~--~lhvD~ 267 (486)
+|.+.+.| .+|.+.++++++... .+|....-..+|+.+ .| -++|+.||++-|+ ++|+-+
T Consensus 110 Qvl~~~fd-----~~DedSIr~vvk~sN------VVINLIGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~ 177 (391)
T KOG2865|consen 110 QVLFMKFD-----LRDEDSIRAVVKHSN------VVINLIGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSC 177 (391)
T ss_pred ceeeeccC-----CCCHHHHHHHHHhCc------EEEEeeccccccCCcccccccchHHHHHHHHHHhhChhheeehhh
Confidence 68888876 579999999887542 233333334555544 33 3689999999997 777753
No 480
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=33.62 E-value=4.4e+02 Score=25.34 Aligned_cols=83 Identities=14% Similarity=0.009 Sum_probs=38.3
Q ss_pred ceEEcCCch-HHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHH
Q 038818 139 GGVIQGTTC-EAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESL 217 (486)
Q Consensus 139 ~~~~t~ggt-~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L 217 (486)
-.++|+||+ .+-..|+..|+. .-.+++.+-......+..-...+.| ++....+|- -|.|++
T Consensus 40 ~vLITGgg~GlGr~ialefa~r-----------g~~~vl~Din~~~~~etv~~~~~~g--~~~~y~cdi-----s~~eei 101 (300)
T KOG1201|consen 40 IVLITGGGSGLGRLIALEFAKR-----------GAKLVLWDINKQGNEETVKEIRKIG--EAKAYTCDI-----SDREEI 101 (300)
T ss_pred EEEEeCCCchHHHHHHHHHHHh-----------CCeEEEEeccccchHHHHHHHHhcC--ceeEEEecC-----CCHHHH
Confidence 355666665 344555555554 2234444444443333332333333 566666663 245555
Q ss_pred HHHHHHHHHCCCccEEEEeecC
Q 038818 218 QAAIDLDIQAGLIPLFLCATVG 239 (486)
Q Consensus 218 ~~~l~~~~~~g~~p~~vv~~~g 239 (486)
.+..++-+++...+.++|-++|
T Consensus 102 ~~~a~~Vk~e~G~V~ILVNNAG 123 (300)
T KOG1201|consen 102 YRLAKKVKKEVGDVDILVNNAG 123 (300)
T ss_pred HHHHHHHHHhcCCceEEEeccc
Confidence 5544444333233444444443
No 481
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=33.44 E-value=24 Score=33.65 Aligned_cols=32 Identities=22% Similarity=0.208 Sum_probs=27.7
Q ss_pred CCccccccCCchHHHHHHHHhCceEEeecccc
Q 038818 239 GTTAITTVDPLGPLCDIAKRYSIWVHVDAAYA 270 (486)
Q Consensus 239 gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g 270 (486)
..+..|..++++++++.|+++|+.+++|-+..
T Consensus 44 vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~N 75 (316)
T PF00128_consen 44 VDPRFGTMEDFKELVDAAHKRGIKVILDVVPN 75 (316)
T ss_dssp ESTTTBHHHHHHHHHHHHHHTTCEEEEEEETS
T ss_pred cccccchhhhhhhhhhccccccceEEEeeecc
Confidence 45567888999999999999999999998753
No 482
>PRK00724 formate dehydrogenase accessory protein; Reviewed
Probab=33.38 E-value=1e+02 Score=29.11 Aligned_cols=74 Identities=23% Similarity=0.277 Sum_probs=47.4
Q ss_pred CeEEEecCC-CchHHHHHHHHc---CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC
Q 038818 172 RLVVYGSDQ-THSALQKAAQIA---GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD 247 (486)
Q Consensus 172 ~~~v~~s~~-~H~s~~~a~~~~---G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id 247 (486)
+.+++.-+. -|.+++|++..+ |+..++...+- .|++..|-+.|++... +|++|..+++|+..
T Consensus 170 ~~l~~~EDIGRHNAvDKviG~all~g~~~~~~~l~~-----SGR~s~emv~Ka~~aG-----ipvivS~saPT~lA---- 235 (263)
T PRK00724 170 ELLAVREDVGRHNALDKLIGAALRAGIPLRDGALLV-----SGRASSEMVQKAAMAG-----IPILVAVSAPTSLA---- 235 (263)
T ss_pred CEEEEEecCchhHHHHHHHHHHHHcCCCccCcEEEE-----eCCchHHHHHHHHHcC-----CcEEEEcccchHHH----
Confidence 333443433 488999986533 55433333332 4599999999887653 46655555555543
Q ss_pred CchHHHHHHHHhCceEE
Q 038818 248 PLGPLCDIAKRYSIWVH 264 (486)
Q Consensus 248 pl~~I~~i~~~~g~~lh 264 (486)
.++|+++|+-|+
T Consensus 236 -----VelA~~~giTLi 247 (263)
T PRK00724 236 -----VELAEELGLTLV 247 (263)
T ss_pred -----HHHHHHhCCEEE
Confidence 899999999885
No 483
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=33.22 E-value=1.4e+02 Score=27.97 Aligned_cols=57 Identities=9% Similarity=0.132 Sum_probs=35.1
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC-----chHHHHHHHHhCceEEeecc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP-----LGPLCDIAKRYSIWVHVDAA 268 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp-----l~~I~~i~~~~g~~lhvD~a 268 (486)
+++.-|+-.. .-+.+.+++.|.+-. +||+--| .|. || +.+|.+++++.++++++||-
T Consensus 79 dLIVHP~l~~---~~av~~i~k~L~Rlh-------avVIGPG---LGR-dp~~~k~i~~iley~~~~dvP~VIDaD 140 (306)
T KOG3974|consen 79 DLIVHPVLDQ---ENAVDIIEKLLQRLH-------AVVIGPG---LGR-DPAILKEIAKILEYLRGKDVPLVIDAD 140 (306)
T ss_pred ceeecccccC---CchHhHHHHHHhhee-------EEEECCC---CCC-CHHHHHHHHHHHHHHhcCCCcEEEcCC
Confidence 5555555321 226677777776532 2222221 343 44 78889999999999999973
No 484
>PF10022 DUF2264: Uncharacterized protein conserved in bacteria (DUF2264); InterPro: IPR016624 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=33.20 E-value=3.4e+02 Score=27.03 Aligned_cols=125 Identities=14% Similarity=0.199 Sum_probs=73.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhcCC---CCCCCC-----CChhHHh---h-------c--C--CCCCCCCCCCHHHHHHH
Q 038818 2 DSEEFRRQGHMIIDFIADYYRDVEK---YPVLSQ-----VEPGYLR---K-------R--L--PESAPYNPEPIETILQD 59 (486)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~p~~~~---~-------~--~--~~~~p~~~~~~~~il~~ 59 (486)
+.+.+.+.+.++++-+..+++.-.. .|+... ..-+.|+ + . . +..-++.+....++.+.
T Consensus 2 tR~~w~~~~~~ll~p~~~~~s~~~~~~~~P~~~~a~~~~~~a~~LEgfaR~l~g~ap~l~~~~~~~~~~~~~~~~~~~~~ 81 (361)
T PF10022_consen 2 TRADWVEALDKLLEPLLPYLSPGGARIRMPGESGAHYDRKAADYLEGFARPLWGAAPWLAGGGEDDDTEEGKLREKLREL 81 (361)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCcCCcCcchhHHHHHHHHHHHHHHHHHhcCCCcCcccccccHHHHHHH
Confidence 5778899999999999998875432 233222 1111121 0 0 1 22234556667788888
Q ss_pred HHhhhcCCCcCCCCCCcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCC
Q 038818 60 VQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLP 129 (486)
Q Consensus 60 l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~ 129 (486)
..+-+..+.. ..||.|.++.....+..--.+.+..+.+-....-|+ +....-.+.+++||...-+.+
T Consensus 82 ~~~gi~~Gtd-P~spdyw~~~~~~dQ~~VEaa~la~aL~~a~~~lW~--~L~~~~k~~l~~wL~~~~~~~ 148 (361)
T PF10022_consen 82 YRKGIANGTD-PKSPDYWGFIGDYDQRLVEAASLALALLRAPEWLWD--PLDEEEKENLVDWLKQIRGIK 148 (361)
T ss_pred HHHHHHhcCC-CCCccccCCcccchhhHhHHHHHHHHHHHCHHHHHh--hCCHHHHHHHHHHHHhcCcCC
Confidence 8888777754 589999998765433322223222222222223343 444566678889999876654
No 485
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=32.81 E-value=83 Score=30.08 Aligned_cols=62 Identities=15% Similarity=0.237 Sum_probs=42.2
Q ss_pred EecCCCCCcccCHHHHHHHHHHHHHC-CCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 202 IKTTKSSSFTLTPESLQAAIDLDIQA-GLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 202 v~~d~~~~~~~d~~~L~~~l~~~~~~-g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
.|.++ ++.+|.+.+++.++...+. |..-+++..+.|....-..+.-.++.+.+.+. .+.+++
T Consensus 10 TPf~~--dg~iD~~~~~~~i~~l~~~~Gv~gi~~~GstGE~~~Lt~~Er~~~~~~~~~~~~~~~~via 75 (288)
T cd00954 10 TPFDE--NGEINEDVLRAIVDYLIEKQGVDGLYVNGSTGEGFLLSVEERKQIAEIVAEAAKGKVTLIA 75 (288)
T ss_pred CCCCC--CCCCCHHHHHHHHHHHHhcCCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCeEEe
Confidence 35554 5699999999999998887 76655566666665555556666776665553 345554
No 486
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=32.20 E-value=1.6e+02 Score=28.84 Aligned_cols=18 Identities=6% Similarity=0.176 Sum_probs=10.2
Q ss_pred ccCHHHHHHHHHHHHHCC
Q 038818 211 TLTPESLQAAIDLDIQAG 228 (486)
Q Consensus 211 ~~d~~~L~~~l~~~~~~g 228 (486)
.++.++.++.++...++|
T Consensus 106 a~n~~e~~~iveaA~~rg 123 (351)
T KOG2741|consen 106 AMNVAEAEEIVEAAEARG 123 (351)
T ss_pred cCCHHHHHHHHHHHHHcC
Confidence 455666666555555544
No 487
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=32.17 E-value=2e+02 Score=29.26 Aligned_cols=93 Identities=14% Similarity=0.176 Sum_probs=50.8
Q ss_pred CeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHH-HHHHHHHHHCCCccEEEEeecCCcc--ccccCC
Q 038818 172 RLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESL-QAAIDLDIQAGLIPLFLCATVGTTA--ITTVDP 248 (486)
Q Consensus 172 ~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L-~~~l~~~~~~g~~p~~vv~~~gtt~--~G~idp 248 (486)
++-+++.+..-++-.+-.+.++-.. .|-.++.+. .-||-++ +++|+....++.. ++++-|+|-.. ....+.
T Consensus 130 kvllVaaD~~RpAA~eQL~~La~q~-~v~~f~~~~----~~~Pv~Iak~al~~ak~~~~D-vvIvDTAGRl~ide~Lm~E 203 (451)
T COG0541 130 KVLLVAADTYRPAAIEQLKQLAEQV-GVPFFGSGT----EKDPVEIAKAALEKAKEEGYD-VVIVDTAGRLHIDEELMDE 203 (451)
T ss_pred ceEEEecccCChHHHHHHHHHHHHc-CCceecCCC----CCCHHHHHHHHHHHHHHcCCC-EEEEeCCCcccccHHHHHH
Confidence 3344444444455444444443211 233344321 3355544 6778777666543 35777877332 223355
Q ss_pred chHHHHHHHHhCceEEeecccc
Q 038818 249 LGPLCDIAKRYSIWVHVDAAYA 270 (486)
Q Consensus 249 l~~I~~i~~~~g~~lhvD~a~g 270 (486)
+.+|.++.+-.-+.+++|+.-|
T Consensus 204 l~~Ik~~~~P~E~llVvDam~G 225 (451)
T COG0541 204 LKEIKEVINPDETLLVVDAMIG 225 (451)
T ss_pred HHHHHhhcCCCeEEEEEecccc
Confidence 6666666666789999998764
No 488
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=32.12 E-value=3.5e+02 Score=24.76 Aligned_cols=102 Identities=13% Similarity=0.090 Sum_probs=59.0
Q ss_pred ceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCC-----c----hHHHHHHHHcCCCCCCeEEEecCCCCC
Q 038818 139 GGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQT-----H----SALQKAAQIAGIDPKNFRAIKTTKSSS 209 (486)
Q Consensus 139 ~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~-----H----~s~~~a~~~~G~g~~~v~~v~~d~~~~ 209 (486)
...+.|||..+++.+..+.+. |.+ ....+.+.+... | ......++.+|+ .++.+.++. .
T Consensus 3 ~~aL~SGGKDS~~Al~~a~~~------G~e-V~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi---~l~~~~~~g--~ 70 (223)
T COG2102 3 VIALYSGGKDSFYALYLALEE------GHE-VVYLLTVKPENGDSYMFHTPNLELAELQAEAMGI---PLVTFDTSG--E 70 (223)
T ss_pred EEEEEecCcHHHHHHHHHHHc------CCe-eEEEEEEecCCCCeeeeeccchHHHHHHHHhcCC---ceEEEecCc--c
Confidence 357889999998544444332 111 122333333333 2 224556777888 788887763 2
Q ss_pred cccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc---CCchHHHHHHHHhCceEE
Q 038818 210 FTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV---DPLGPLCDIAKRYSIWVH 264 (486)
Q Consensus 210 ~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i---dpl~~I~~i~~~~g~~lh 264 (486)
..-..++|.++|..-.-. .|+ +|+| +-...+-.+|++.|+...
T Consensus 71 ~e~eve~L~~~l~~l~~d-----~iv-------~GaI~s~yqk~rve~lc~~lGl~~~ 116 (223)
T COG2102 71 EEREVEELKEALRRLKVD-----GIV-------AGAIASEYQKERVERLCEELGLKVY 116 (223)
T ss_pred chhhHHHHHHHHHhCccc-----EEE-------EchhhhHHHHHHHHHHHHHhCCEEe
Confidence 244678888888764311 122 4666 346778889999887553
No 489
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=32.02 E-value=39 Score=31.59 Aligned_cols=29 Identities=14% Similarity=0.031 Sum_probs=22.4
Q ss_pred ccccCCchHHHHHHHHhCceEEeeccccc
Q 038818 243 ITTVDPLGPLCDIAKRYSIWVHVDAAYAG 271 (486)
Q Consensus 243 ~G~idpl~~I~~i~~~~g~~lhvD~a~g~ 271 (486)
.|.+.+.+++.++++++++-++||++|.-
T Consensus 48 ~G~l~~~~~l~~~l~~~~i~~VIDATHPf 76 (248)
T PRK08057 48 VGGFGGAEGLAAYLREEGIDLVIDATHPY 76 (248)
T ss_pred ECCCCCHHHHHHHHHHCCCCEEEECCCcc
Confidence 45556677888888888899999998843
No 490
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=31.65 E-value=31 Score=35.84 Aligned_cols=30 Identities=23% Similarity=0.101 Sum_probs=26.4
Q ss_pred CccccccCCchHHHHHHHHhCceEEeeccc
Q 038818 240 TTAITTVDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 240 tt~~G~idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
.+..|..++++++++-|+++|+.+++|.+.
T Consensus 74 d~~fGt~~dl~~Li~~~H~~Gi~vi~D~V~ 103 (479)
T PRK09441 74 RTKYGTKEELLNAIDALHENGIKVYADVVL 103 (479)
T ss_pred CcCcCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 345788899999999999999999999875
No 491
>PRK00685 metal-dependent hydrolase; Provisional
Probab=31.19 E-value=3.9e+02 Score=24.02 Aligned_cols=78 Identities=12% Similarity=0.106 Sum_probs=47.8
Q ss_pred eEEEecCCCchH-HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchH
Q 038818 173 LVVYGSDQTHSA-LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGP 251 (486)
Q Consensus 173 ~~v~~s~~~H~s-~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~ 251 (486)
.+.++.+..+.. +....+..++ .+..+|+.. .+.|++++..+..+... |..++.++-.+....-.+.++
T Consensus 136 ~i~~~GDt~~~~~~~~~~~~~~~---D~~~~~~~~--~~h~~~~ea~~~~~~~~-----~k~~v~~H~~~~~~~~~~~~~ 205 (228)
T PRK00685 136 TIYHAGDTGLFSDMKLIGELHKP---DVALLPIGD--NFTMGPEDAALAVELIK-----PKIVIPMHYNTFPLIEQDPEK 205 (228)
T ss_pred EEEEecCccchhHHHHHHHhhCC---CEEEEecCC--ccccCHHHHHHHHHhhC-----CCEEEEeccCCCcCCcCCHHH
Confidence 444555554433 3333444566 777788753 56899988877765432 446777776544334456788
Q ss_pred HHHHHHHhC
Q 038818 252 LCDIAKRYS 260 (486)
Q Consensus 252 I~~i~~~~g 260 (486)
+.+.+++.+
T Consensus 206 ~~~~~~~~~ 214 (228)
T PRK00685 206 FKALVEGLG 214 (228)
T ss_pred HHHHHHhcC
Confidence 888887744
No 492
>PRK10494 hypothetical protein; Provisional
Probab=31.11 E-value=1.5e+02 Score=27.83 Aligned_cols=71 Identities=13% Similarity=0.066 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHcCCCCCCccCCCcceEEcC--CchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH-HHHHHHH
Q 038818 115 ENIVMDWLGEMLKLPKSFLFSGTGGGVIQG--TTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA-LQKAAQI 191 (486)
Q Consensus 115 e~~~~~~l~~l~g~~~~~~~~~~~~~~~t~--ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-~~~a~~~ 191 (486)
|.++.+.++.-+|.|++ ..++-. ..|.-|. ...++.. + .+.+++|++..|-- -...++.
T Consensus 138 EA~~~~~~l~~lGVp~~-------~Ii~e~~s~nT~eNa--~~~~~~~--------~-~~~iiLVTsa~Hm~RA~~~f~~ 199 (259)
T PRK10494 138 TAEVGARVAQSLGVPRE-------DIITLDLPKDTEEEA--AAVKQAI--------G-DAPFLLVTSASHLPRAMIFFQQ 199 (259)
T ss_pred HHHHHHHHHHHcCCCHH-------HeeeCCCCCCHHHHH--HHHHHHh--------C-CCCEEEECCHHHHHHHHHHHHH
Confidence 66666777778899875 334322 2233332 2222111 1 34467788778854 3445677
Q ss_pred cCCCCCCeEEEecCC
Q 038818 192 AGIDPKNFRAIKTTK 206 (486)
Q Consensus 192 ~G~g~~~v~~v~~d~ 206 (486)
.|+ +++..|+|-
T Consensus 200 ~Gl---~v~p~Ptd~ 211 (259)
T PRK10494 200 EGL---NPLPAPANQ 211 (259)
T ss_pred cCC---ceeecCCcc
Confidence 788 999988863
No 493
>TIGR00129 fdhD_narQ formate dehydrogenase family accessory protein FdhD. FdhD in E. coli and NarQ in B. subtilis are required for the activity of formate dehydrogenase. The gene name in B. subtilis reflects the requirement of the neighboring gene narA for nitrate assimilation, for which NarQ is not required. In some species, the gene is associated not with a known formate dehydrogenase but with a related putative molybdopterin-binding oxidoreductase. A reasonable hypothesis is that this protein helps prepare a required cofactor for assembly into the holoenzyme.
Probab=30.74 E-value=1.3e+02 Score=27.98 Aligned_cols=66 Identities=20% Similarity=0.199 Sum_probs=44.3
Q ss_pred CchHHHHHHHHc---CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHH
Q 038818 181 THSALQKAAQIA---GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAK 257 (486)
Q Consensus 181 ~H~s~~~a~~~~---G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~ 257 (486)
-|.+++|.+..+ |+.......+- .||+..|-+.|++... +|+++..+++|+.. .++|+
T Consensus 151 RHNAlDK~iG~~ll~g~~~~~~~l~~-----SGRis~emv~Ka~~aG-----IpvlvS~sapT~la---------velA~ 211 (237)
T TIGR00129 151 RHNAVDKLIGSALLNGANLRKGFILY-----SGRISSEMVQKAARCG-----VPIIASKSAPTDLA---------IEVAE 211 (237)
T ss_pred hHHHHHHHHHHHHHcCCCccCcEEEE-----eCCCcHHHHHHHHHcC-----CCEEEEcccchHHH---------HHHHH
Confidence 488999986544 55432223332 4599999998887653 47666555555543 89999
Q ss_pred HhCceEEe
Q 038818 258 RYSIWVHV 265 (486)
Q Consensus 258 ~~g~~lhv 265 (486)
++|+-|+-
T Consensus 212 ~~giTLig 219 (237)
T TIGR00129 212 ESNITLIG 219 (237)
T ss_pred HhCCEEEE
Confidence 99998864
No 494
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=30.59 E-value=43 Score=31.37 Aligned_cols=28 Identities=14% Similarity=0.153 Sum_probs=20.1
Q ss_pred ccccCCchHHHHHHHHhCceEEeecccc
Q 038818 243 ITTVDPLGPLCDIAKRYSIWVHVDAAYA 270 (486)
Q Consensus 243 ~G~idpl~~I~~i~~~~g~~lhvD~a~g 270 (486)
.|.+-+.+++.++|+++++-++||++|.
T Consensus 49 ~G~lg~~~~l~~~l~~~~i~~vIDATHP 76 (249)
T PF02571_consen 49 VGRLGDEEGLAEFLRENGIDAVIDATHP 76 (249)
T ss_pred ECCCCCHHHHHHHHHhCCCcEEEECCCc
Confidence 3455566777777778888888888874
No 495
>PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown though a number are annotated as outer surface proteins.; PDB: 2P0O_A 1X7F_A.
Probab=30.41 E-value=59 Score=32.25 Aligned_cols=58 Identities=19% Similarity=0.186 Sum_probs=38.1
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeecCCc-cccccCCchHHHHHHHHhCceEEeecccc
Q 038818 213 TPESLQAAIDLDIQAGLIPLFLCATVGTT-AITTVDPLGPLCDIAKRYSIWVHVDAAYA 270 (486)
Q Consensus 213 d~~~L~~~l~~~~~~g~~p~~vv~~~gtt-~~G~idpl~~I~~i~~~~g~~lhvD~a~g 270 (486)
..++.++-|+...+.|..-++..+-.+.. ..-..+.+++|.++|+++|+.+++|-.-.
T Consensus 12 ~~~~~~~yi~~a~~~Gf~~iFTSL~ipe~~~~~~~~~~~~l~~~a~~~~~~v~~Disp~ 70 (357)
T PF05913_consen 12 SFEENKAYIEKAAKYGFKRIFTSLHIPEDDPEDYLERLKELLKLAKELGMEVIADISPK 70 (357)
T ss_dssp -HHHHHHHHHHHHCTTEEEEEEEE---------HHHHHHHHHHHHHHCT-EEEEEE-CC
T ss_pred CHHHHHHHHHHHHHCCCCEEECCCCcCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHH
Confidence 67888888988888886655555544443 23445778999999999999999997643
No 496
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=30.33 E-value=3e+02 Score=25.82 Aligned_cols=57 Identities=19% Similarity=0.156 Sum_probs=41.7
Q ss_pred ccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc---cCCchHHHHHHHHhCceEEeecccc
Q 038818 211 TLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT---VDPLGPLCDIAKRYSIWVHVDAAYA 270 (486)
Q Consensus 211 ~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~---idpl~~I~~i~~~~g~~lhvD~a~g 270 (486)
-+.++++.-+.+.-...|. +.++++.=|.|. |. +-|+..|.-+. +.++++++|.+|+
T Consensus 126 ~~t~~e~l~aaeyi~~~Gn-~~viLcERG~tf-~y~r~~~D~~~ip~~k-~~~~PVi~DpSHs 185 (258)
T TIGR01362 126 FLSPWDMKNVVEKVLSTGN-KNILLCERGTSF-GYNNLVVDMRSLPIMR-ELGCPVIFDATHS 185 (258)
T ss_pred cCCHHHHHHHHHHHHHcCC-CcEEEEeCCCCc-CCCCcccchhhhHHHH-hcCCCEEEeCCcc
Confidence 5789998888887776665 445667667754 65 34677776554 4589999999996
No 497
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=29.87 E-value=4.3e+02 Score=25.99 Aligned_cols=84 Identities=20% Similarity=0.063 Sum_probs=53.2
Q ss_pred CchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCC-ccccc---cCCchHHHHHH
Q 038818 181 THSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGT-TAITT---VDPLGPLCDIA 256 (486)
Q Consensus 181 ~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gt-t~~G~---idpl~~I~~i~ 256 (486)
.++.+.+.+..+|. .+.+... ...+++++..+.+.-...|..- ++++-.|+ |..+. .-++..|..+.
T Consensus 188 ~N~~LL~~va~~~k----PViLk~G----~~~ti~E~l~A~e~i~~~GN~~-viL~erG~~tf~~~~~~~ldl~ai~~lk 258 (335)
T PRK08673 188 QNFDLLKEVGKTNK----PVLLKRG----MSATIEEWLMAAEYILAEGNPN-VILCERGIRTFETATRNTLDLSAVPVIK 258 (335)
T ss_pred cCHHHHHHHHcCCC----cEEEeCC----CCCCHHHHHHHHHHHHHcCCCe-EEEEECCCCCCCCcChhhhhHHHHHHHH
Confidence 44555555544443 4445432 1448999999888776666543 34444444 33232 24678888888
Q ss_pred HHhCceEEeeccccchh
Q 038818 257 KRYSIWVHVDAAYAGSA 273 (486)
Q Consensus 257 ~~~g~~lhvD~a~g~~~ 273 (486)
+.+++.+++|..|+.+.
T Consensus 259 ~~~~lPVi~d~sH~~G~ 275 (335)
T PRK08673 259 KLTHLPVIVDPSHATGK 275 (335)
T ss_pred HhcCCCEEEeCCCCCcc
Confidence 88899999999998764
No 498
>PF05670 DUF814: Domain of unknown function (DUF814); InterPro: IPR008532 This domain occurs in proteins that have been annotated as Fibronectin/fibrinogen binding protein by similarity. This annotation comes from O34693 from SWISSPROT where the N-terminal region is involved in this activity []. Hence the activity of this C-terminal domain is unknown. This domain contains a conserved motif D/E-X-W/Y-X-H that may be functionally important.
Probab=29.79 E-value=33 Score=26.37 Aligned_cols=25 Identities=20% Similarity=0.282 Sum_probs=18.9
Q ss_pred hHH-HHHHHHhCceEEeeccccchhc
Q 038818 250 GPL-CDIAKRYSIWVHVDAAYAGSAC 274 (486)
Q Consensus 250 ~~I-~~i~~~~g~~lhvD~a~g~~~~ 274 (486)
+.| .++++..++|||+|..-|...+
T Consensus 20 e~L~~k~~~~~D~wfH~~~~pg~hvi 45 (90)
T PF05670_consen 20 EMLTKKYARPNDLWFHADDFPGPHVI 45 (90)
T ss_pred HHHHHHhhhhcceeEeccCCCCCEEE
Confidence 345 6888999999999986655444
No 499
>PF02634 FdhD-NarQ: FdhD/NarQ family; InterPro: IPR003786 Formate dehydrogenase is required for nitrate inducible formate dehydrogenase activity. In Wolinella succinogenes it is a membranous molybdo-enzyme which is involved in phosphorylative electron transport. The functional formate dehydrogenase may be made up of three or four different subunits []. In Escherichia coli, FdhD is required for the formation of active formate dehydrogenases.; GO: 0008863 formate dehydrogenase (NAD+) activity, 0009326 formate dehydrogenase complex; PDB: 2PW9_D.
Probab=29.69 E-value=1.5e+02 Score=27.41 Aligned_cols=74 Identities=24% Similarity=0.326 Sum_probs=43.1
Q ss_pred eEEEecCC-CchHHHHHHHHc---CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC
Q 038818 173 LVVYGSDQ-THSALQKAAQIA---GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP 248 (486)
Q Consensus 173 ~~v~~s~~-~H~s~~~a~~~~---G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp 248 (486)
.+++.-+. -|.+++|+...+ |+...+...+- .||+..|-+.|+.... +|+++..+++|+. |
T Consensus 142 ~~~~~EDIGRHNA~DK~iG~~ll~g~~~~~~~l~~-----SGR~s~emv~Ka~~aG-----ipvivS~sapT~~-a---- 206 (236)
T PF02634_consen 142 ILLVREDIGRHNALDKLIGAALLNGIDLSDKILLT-----SGRISSEMVQKAARAG-----IPVIVSRSAPTSL-A---- 206 (236)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHT-TSS-SSSEEEE-----SS-B-HHHHHHHHHHT------SEEEESS-B-HH-H----
T ss_pred EEEEEEECchhhHHHHHHHHHHhCCCCccCcEEEE-----cCccCHHHHHHHHHcC-----CCEEEEcccccHH-H----
Confidence 34444433 388899986544 55433333332 4699999999987764 3665555555543 3
Q ss_pred chHHHHHHHHhCceEEe
Q 038818 249 LGPLCDIAKRYSIWVHV 265 (486)
Q Consensus 249 l~~I~~i~~~~g~~lhv 265 (486)
.++|+++|+-|+-
T Consensus 207 ----v~~A~~~gitLig 219 (236)
T PF02634_consen 207 ----VELARKLGITLIG 219 (236)
T ss_dssp ----HHHHHHHT-EEEE
T ss_pred ----HHHHHHhCCEEEE
Confidence 8999999998753
No 500
>PRK10867 signal recognition particle protein; Provisional
Probab=29.64 E-value=3.4e+02 Score=27.80 Aligned_cols=57 Identities=19% Similarity=0.237 Sum_probs=32.9
Q ss_pred cCHHHHHH-HHHHHHHCCCccEEEEeecCCcc--ccccCCchHHHHHHHHhCceEEeeccc
Q 038818 212 LTPESLQA-AIDLDIQAGLIPLFLCATVGTTA--ITTVDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 212 ~d~~~L~~-~l~~~~~~g~~p~~vv~~~gtt~--~G~idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
.|+.++.. +++.....+. -.+++-|+|... ...+..+.++.++++...+++++|+..
T Consensus 166 ~dp~~i~~~a~~~a~~~~~-DvVIIDTaGrl~~d~~lm~eL~~i~~~v~p~evllVlda~~ 225 (433)
T PRK10867 166 QDPVDIAKAALEEAKENGY-DVVIVDTAGRLHIDEELMDELKAIKAAVNPDEILLVVDAMT 225 (433)
T ss_pred CCHHHHHHHHHHHHHhcCC-CEEEEeCCCCcccCHHHHHHHHHHHHhhCCCeEEEEEeccc
Confidence 36766664 4443333332 245777777543 223344556666666678899999754
Done!