Query 038818
Match_columns 486
No_of_seqs 258 out of 2717
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 05:27:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038818.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038818hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k40_A Aromatic-L-amino-acid d 100.0 1E-73 3.5E-78 588.8 47.7 464 1-485 1-474 (475)
2 4e1o_A HDC, histidine decarbox 100.0 3.7E-73 1.3E-77 586.1 51.7 464 1-484 6-480 (481)
3 1js3_A DDC;, DOPA decarboxylas 100.0 3.5E-68 1.2E-72 550.8 50.4 466 1-484 1-476 (486)
4 3vp6_A Glutamate decarboxylase 100.0 3.5E-67 1.2E-71 544.7 54.0 474 2-483 20-506 (511)
5 2okj_A Glutamate decarboxylase 100.0 1.5E-64 5E-69 525.7 50.7 475 1-483 16-503 (504)
6 2jis_A Cysteine sulfinic acid 100.0 2.2E-63 7.4E-68 518.0 50.4 471 1-481 34-514 (515)
7 2qma_A Diaminobutyrate-pyruvat 100.0 1.3E-61 4.4E-66 502.8 49.3 458 1-482 29-496 (497)
8 2dgk_A GAD-beta, GADB, glutama 100.0 1.2E-48 4.1E-53 400.7 34.0 411 35-484 7-436 (452)
9 3hbx_A GAD 1, glutamate decarb 100.0 1.7E-45 5.7E-50 381.3 35.8 414 29-484 14-446 (502)
10 3mc6_A Sphingosine-1-phosphate 100.0 1E-40 3.5E-45 346.1 28.6 393 42-484 34-439 (497)
11 3mad_A Sphingosine-1-phosphate 100.0 3.6E-40 1.2E-44 343.2 30.9 393 44-484 69-471 (514)
12 3bc8_A O-phosphoseryl-tRNA(SEC 100.0 1.9E-37 6.7E-42 309.3 25.8 380 44-483 21-444 (450)
13 3f9t_A TDC, L-tyrosine decarbo 100.0 1.1E-35 3.6E-40 298.6 34.4 381 45-480 4-396 (397)
14 2z67_A O-phosphoseryl-tRNA(SEC 100.0 2.2E-36 7.5E-41 309.7 26.5 394 3-479 31-455 (456)
15 1wyu_B Glycine dehydrogenase s 100.0 2.8E-31 9.4E-36 273.2 29.1 395 35-480 31-439 (474)
16 3nnk_A Ureidoglycine-glyoxylat 100.0 2.5E-29 8.6E-34 253.7 28.2 358 71-482 9-390 (411)
17 1wyu_A Glycine dehydrogenase ( 100.0 9E-29 3.1E-33 252.1 29.3 378 34-479 30-437 (438)
18 3isl_A Purine catabolism prote 100.0 6.7E-29 2.3E-33 251.0 25.9 357 71-482 7-390 (416)
19 4hvk_A Probable cysteine desul 100.0 2.8E-28 9.7E-33 243.1 29.9 343 76-484 3-375 (382)
20 3hl2_A O-phosphoseryl-tRNA(SEC 100.0 7.6E-28 2.6E-32 236.3 28.7 388 44-485 39-464 (501)
21 3kgw_A Alanine-glyoxylate amin 100.0 2.6E-28 9E-33 244.5 25.3 358 72-484 20-390 (393)
22 2dr1_A PH1308 protein, 386AA l 100.0 4.3E-28 1.5E-32 242.5 26.8 351 74-483 20-380 (386)
23 2huf_A Alanine glyoxylate amin 100.0 7.3E-28 2.5E-32 241.6 26.2 356 73-483 17-384 (393)
24 2z9v_A Aspartate aminotransfer 100.0 1.3E-27 4.5E-32 239.6 27.8 353 73-483 8-372 (392)
25 4eb5_A Probable cysteine desul 100.0 2.8E-27 9.6E-32 236.2 28.6 342 76-484 3-375 (382)
26 1vjo_A Alanine--glyoxylate ami 100.0 8.8E-28 3E-32 241.1 24.9 346 76-479 36-392 (393)
27 3e9k_A Kynureninase; kynurenin 100.0 8.9E-28 3.1E-32 246.7 24.7 358 76-483 70-462 (465)
28 3zrp_A Serine-pyruvate aminotr 100.0 7.6E-28 2.6E-32 240.4 23.2 323 108-483 30-364 (384)
29 2yrr_A Aminotransferase, class 100.0 7.7E-28 2.6E-32 237.4 22.8 343 79-481 4-352 (353)
30 3lvm_A Cysteine desulfurase; s 100.0 9.6E-27 3.3E-31 235.8 30.6 343 75-484 24-401 (423)
31 1iug_A Putative aspartate amin 100.0 1.4E-27 4.9E-32 235.6 23.7 340 80-485 6-351 (352)
32 3ffr_A Phosphoserine aminotran 100.0 1.2E-27 3.9E-32 237.1 21.3 344 75-479 4-361 (362)
33 1t3i_A Probable cysteine desul 100.0 7.5E-27 2.6E-31 236.2 26.2 321 112-483 71-414 (420)
34 2ch1_A 3-hydroxykynurenine tra 100.0 5.4E-27 1.9E-31 235.5 24.7 357 72-483 15-384 (396)
35 1eg5_A Aminotransferase; PLP-d 100.0 8.5E-26 2.9E-30 225.5 31.2 309 109-484 40-378 (384)
36 1kmj_A Selenocysteine lyase; p 100.0 2.5E-26 8.6E-31 231.1 27.2 322 111-482 65-405 (406)
37 3f0h_A Aminotransferase; RER07 99.9 1.9E-26 6.4E-31 229.9 24.7 342 79-481 23-373 (376)
38 3vax_A Putative uncharacterize 99.9 6.9E-27 2.4E-31 235.0 20.5 353 72-481 19-399 (400)
39 3dzz_A Putative pyridoxal 5'-p 99.9 4E-26 1.4E-30 228.7 23.8 334 89-482 44-389 (391)
40 1m32_A 2-aminoethylphosphonate 99.9 3.4E-26 1.1E-30 226.8 23.0 315 113-481 37-364 (366)
41 2bkw_A Alanine-glyoxylate amin 99.9 4E-26 1.4E-30 228.1 22.7 356 74-481 4-383 (385)
42 1svv_A Threonine aldolase; str 99.9 9.5E-26 3.2E-30 223.1 25.1 322 89-482 29-358 (359)
43 1v72_A Aldolase; PLP-dependent 99.9 5.1E-26 1.7E-30 224.8 20.5 302 112-482 42-353 (356)
44 3cai_A Possible aminotransfera 99.9 8.8E-26 3E-30 227.5 22.5 342 75-478 28-405 (406)
45 1elu_A L-cysteine/L-cystine C- 99.9 3.5E-26 1.2E-30 228.9 19.0 315 112-478 58-388 (390)
46 1j32_A Aspartate aminotransfer 99.9 5.9E-26 2E-30 227.4 20.0 330 89-482 47-387 (388)
47 2w8t_A SPT, serine palmitoyltr 99.9 1.6E-24 5.5E-29 219.9 29.3 301 112-484 108-417 (427)
48 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 5E-26 1.7E-30 226.3 17.1 301 112-482 52-370 (371)
49 3e77_A Phosphoserine aminotran 99.9 6.6E-26 2.3E-30 223.9 16.7 339 82-481 21-374 (377)
50 1xi9_A Putative transaminase; 99.9 6.6E-25 2.3E-29 221.2 24.2 329 90-484 59-405 (406)
51 3tqx_A 2-amino-3-ketobutyrate 99.9 1.7E-24 5.7E-29 217.4 26.9 300 112-482 87-396 (399)
52 1qz9_A Kynureninase; kynurenin 99.9 1.5E-24 5E-29 219.2 26.0 311 113-482 71-402 (416)
53 4dq6_A Putative pyridoxal phos 99.9 8E-25 2.7E-29 219.2 23.6 326 88-479 48-390 (391)
54 2gb3_A Aspartate aminotransfer 99.9 3.9E-25 1.3E-29 223.2 20.9 327 89-484 60-404 (409)
55 3nra_A Aspartate aminotransfer 99.9 3.5E-25 1.2E-29 223.1 19.6 318 104-483 73-406 (407)
56 1o4s_A Aspartate aminotransfer 99.9 1.1E-24 3.8E-29 218.4 22.2 323 88-480 57-387 (389)
57 1gd9_A Aspartate aminotransfer 99.9 5.7E-25 1.9E-29 220.3 20.0 328 89-481 43-385 (389)
58 3m5u_A Phosphoserine aminotran 99.9 5E-25 1.7E-29 216.9 18.5 339 76-481 6-359 (361)
59 1c7n_A Cystalysin; transferase 99.9 1.3E-24 4.3E-29 218.5 21.8 332 89-484 48-395 (399)
60 2zc0_A Alanine glyoxylate tran 99.9 3.5E-24 1.2E-28 215.9 24.9 337 87-485 51-407 (407)
61 3l8a_A METC, putative aminotra 99.9 9.8E-25 3.4E-29 221.1 20.8 331 89-480 78-420 (421)
62 3ke3_A Putative serine-pyruvat 99.9 2.6E-24 8.9E-29 214.9 22.8 327 107-484 29-378 (379)
63 1fc4_A 2-amino-3-ketobutyrate 99.9 1.4E-23 4.9E-28 211.0 27.8 301 113-482 90-397 (401)
64 3piu_A 1-aminocyclopropane-1-c 99.9 1.5E-23 5E-28 213.4 27.8 324 105-483 82-433 (435)
65 3kax_A Aminotransferase, class 99.9 4.9E-24 1.7E-28 212.8 23.4 327 89-479 41-382 (383)
66 1b9h_A AHBA synthase, protein 99.9 1.9E-23 6.4E-28 209.2 27.7 331 90-481 19-387 (388)
67 3a9z_A Selenocysteine lyase; P 99.9 3E-24 1E-28 218.2 21.8 356 74-483 19-429 (432)
68 2fnu_A Aminotransferase; prote 99.9 4.5E-24 1.6E-28 212.4 22.0 310 116-482 35-372 (375)
69 1iay_A ACC synthase 2, 1-amino 99.9 6E-23 2.1E-27 208.3 30.5 325 104-481 78-426 (428)
70 1rv3_A Serine hydroxymethyltra 99.9 1E-24 3.5E-29 224.5 17.2 326 105-481 82-430 (483)
71 1d2f_A MALY protein; aminotran 99.9 1.9E-23 6.3E-28 209.4 25.6 331 88-482 44-389 (390)
72 2vyc_A Biodegradative arginine 99.9 1E-23 3.6E-28 226.6 24.9 316 116-482 208-605 (755)
73 3dyd_A Tyrosine aminotransfera 99.9 8.9E-24 3.1E-28 214.4 22.9 340 87-483 73-425 (427)
74 3aow_A Putative uncharacterize 99.9 7.1E-23 2.4E-27 208.9 29.0 335 87-484 93-447 (448)
75 1vp4_A Aminotransferase, putat 99.9 1.7E-23 5.9E-28 212.2 24.0 336 87-484 60-420 (425)
76 3a2b_A Serine palmitoyltransfe 99.9 1.7E-23 6E-28 210.2 23.6 301 110-482 85-392 (398)
77 3qm2_A Phosphoserine aminotran 99.9 4.9E-25 1.7E-29 218.9 11.8 306 108-481 67-384 (386)
78 3g0t_A Putative aminotransfera 99.9 1.8E-23 6.3E-28 212.6 23.7 343 90-481 62-436 (437)
79 1u08_A Hypothetical aminotrans 99.9 1.2E-23 3.9E-28 210.6 21.9 328 88-477 46-385 (386)
80 3h14_A Aminotransferase, class 99.9 6.8E-23 2.3E-27 205.3 26.7 326 88-482 47-382 (391)
81 3tcm_A Alanine aminotransferas 99.9 1.4E-22 4.7E-27 209.6 29.7 331 101-484 126-496 (500)
82 2o0r_A RV0858C (N-succinyldiam 99.9 7.1E-24 2.4E-28 214.0 19.4 333 89-482 42-396 (411)
83 2c81_A Glutamine-2-deoxy-scyll 99.9 2.4E-23 8.3E-28 210.6 23.1 322 112-483 41-415 (418)
84 3op7_A Aminotransferase class 99.9 6.6E-24 2.3E-28 211.5 18.7 311 102-485 56-374 (375)
85 3ffh_A Histidinol-phosphate am 99.9 1.7E-22 5.7E-27 200.4 28.1 287 116-478 70-362 (363)
86 3frk_A QDTB; aminotransferase, 99.9 2.7E-24 9.1E-29 214.3 14.8 322 88-480 17-366 (373)
87 3kki_A CAI-1 autoinducer synth 99.9 1.8E-22 6.3E-27 203.5 28.2 291 113-481 104-403 (409)
88 3ly1_A Putative histidinol-pho 99.9 1.8E-22 6.1E-27 199.4 27.4 292 115-481 53-351 (354)
89 1v2d_A Glutamine aminotransfer 99.9 1.5E-23 5.3E-28 209.3 19.8 318 88-483 41-372 (381)
90 3uwc_A Nucleotide-sugar aminot 99.9 1E-23 3.6E-28 209.9 18.5 321 90-481 21-370 (374)
91 1bw0_A TAT, protein (tyrosine 99.9 8.2E-23 2.8E-27 206.5 24.6 341 90-484 55-415 (416)
92 1yiz_A Kynurenine aminotransfe 99.9 1.8E-23 6.2E-28 212.2 19.8 341 89-479 54-426 (429)
93 2a7v_A Serine hydroxymethyltra 99.9 4.3E-23 1.5E-27 210.7 22.6 315 107-480 94-439 (490)
94 2x3l_A ORN/Lys/Arg decarboxyla 99.9 2.7E-24 9.1E-29 219.2 13.6 292 113-482 57-353 (446)
95 2zyj_A Alpha-aminodipate amino 99.9 6.2E-23 2.1E-27 206.1 23.3 326 87-484 49-395 (397)
96 2dkj_A Serine hydroxymethyltra 99.9 7.7E-24 2.6E-28 213.2 16.4 330 87-481 36-387 (407)
97 1c4k_A Protein (ornithine deca 99.9 4.7E-23 1.6E-27 219.5 22.9 325 116-482 176-566 (730)
98 2z61_A Probable aspartate amin 99.9 4.4E-23 1.5E-27 205.1 21.2 314 88-480 45-369 (370)
99 3cq5_A Histidinol-phosphate am 99.9 6.2E-22 2.1E-26 196.9 29.3 294 111-480 71-366 (369)
100 1b5p_A Protein (aspartate amin 99.9 2.7E-23 9.3E-28 207.9 19.4 324 90-480 49-383 (385)
101 2x5d_A Probable aminotransfera 99.9 7.7E-23 2.6E-27 206.5 22.7 334 88-483 53-399 (412)
102 3dr4_A Putative perosamine syn 99.9 1.3E-23 4.6E-28 210.5 16.9 303 117-478 60-389 (391)
103 3euc_A Histidinol-phosphate am 99.9 4.3E-23 1.5E-27 204.9 20.4 287 116-479 70-365 (367)
104 3ele_A Amino transferase; RER0 99.9 7.8E-23 2.7E-27 205.3 22.1 312 103-483 70-397 (398)
105 3get_A Histidinol-phosphate am 99.9 2E-22 6.7E-27 200.0 24.3 287 117-479 69-364 (365)
106 2oga_A Transaminase; PLP-depen 99.9 7E-23 2.4E-27 205.9 20.3 326 88-483 44-397 (399)
107 2fyf_A PSAT, phosphoserine ami 99.9 4E-23 1.4E-27 207.6 18.4 341 76-481 41-397 (398)
108 1bs0_A Protein (8-amino-7-oxon 99.9 2.5E-22 8.7E-27 200.6 23.8 292 113-478 84-383 (384)
109 3fdb_A Beta C-S lyase, putativ 99.9 2.6E-22 9E-27 199.9 23.7 322 89-481 40-375 (377)
110 2cb1_A O-acetyl homoserine sul 99.9 4.2E-22 1.4E-26 201.1 25.3 301 112-477 55-411 (412)
111 2bwn_A 5-aminolevulinate synth 99.9 8E-22 2.7E-26 198.2 25.8 301 113-482 91-400 (401)
112 3n0l_A Serine hydroxymethyltra 99.9 4.1E-22 1.4E-26 201.3 23.3 310 107-481 65-388 (417)
113 2dou_A Probable N-succinyldiam 99.9 6.9E-22 2.4E-26 196.9 24.6 323 89-479 42-375 (376)
114 2vi8_A Serine hydroxymethyltra 99.9 2.1E-22 7.1E-27 202.6 21.0 310 107-482 63-387 (405)
115 2o1b_A Aminotransferase, class 99.9 1.2E-22 4.2E-27 204.5 19.1 326 89-481 64-402 (404)
116 3ftb_A Histidinol-phosphate am 99.9 1.6E-21 5.6E-26 192.9 27.0 288 116-481 64-360 (361)
117 3fvs_A Kynurenine--oxoglutarat 99.9 3.6E-22 1.2E-26 202.1 22.2 342 89-481 45-421 (422)
118 1mdo_A ARNB aminotransferase; 99.9 5.5E-22 1.9E-26 198.8 22.9 309 117-482 43-386 (393)
119 3ihj_A Alanine aminotransferas 99.9 2.5E-21 8.7E-26 199.8 27.4 338 102-484 122-495 (498)
120 3lws_A Aromatic amino acid bet 99.9 1.6E-21 5.3E-26 192.9 24.7 331 73-478 11-355 (357)
121 2rfv_A Methionine gamma-lyase; 99.9 5.9E-22 2E-26 199.1 21.2 288 111-478 62-396 (398)
122 3b46_A Aminotransferase BNA3; 99.9 1.2E-22 4.1E-27 207.4 16.4 342 87-478 72-443 (447)
123 3qhx_A Cystathionine gamma-syn 99.9 1.2E-21 4.1E-26 196.3 23.3 284 112-475 65-391 (392)
124 1e5e_A MGL, methionine gamma-l 99.9 2.8E-21 9.6E-26 194.4 25.5 286 113-485 62-398 (404)
125 1o69_A Aminotransferase; struc 99.9 2.5E-21 8.6E-26 194.2 25.1 318 117-480 36-385 (394)
126 3ezs_A Aminotransferase ASPB; 99.9 4E-21 1.4E-25 191.3 26.4 317 88-481 39-374 (376)
127 2c0r_A PSAT, phosphoserine ami 99.9 7.9E-22 2.7E-26 195.5 20.7 306 108-481 44-360 (362)
128 3gbx_A Serine hydroxymethyltra 99.9 4.1E-22 1.4E-26 201.4 18.9 307 110-481 73-395 (420)
129 1gc0_A Methionine gamma-lyase; 99.9 2.6E-21 8.8E-26 194.4 23.8 285 112-478 64-397 (398)
130 1w23_A Phosphoserine aminotran 99.9 1.3E-22 4.3E-27 200.9 13.9 331 85-481 13-359 (360)
131 2x5f_A Aspartate_tyrosine_phen 99.9 3.9E-21 1.3E-25 195.1 24.2 315 103-482 82-429 (430)
132 1lc5_A COBD, L-threonine-O-3-p 99.9 5.8E-21 2E-25 189.4 24.7 292 117-483 63-361 (364)
133 1fg7_A Histidinol phosphate am 99.9 6.2E-21 2.1E-25 188.7 24.7 284 117-478 62-354 (356)
134 3ecd_A Serine hydroxymethyltra 99.9 2.6E-21 9E-26 195.7 22.4 307 112-482 77-397 (425)
135 3b8x_A WBDK, pyridoxamine 5-ph 99.9 1.5E-20 5.2E-25 188.2 27.2 317 106-475 31-389 (390)
136 1qgn_A Protein (cystathionine 99.9 2.9E-21 9.9E-26 195.7 21.7 286 112-481 113-444 (445)
137 3hdo_A Histidinol-phosphate am 99.9 3.1E-21 1.1E-25 191.1 21.5 284 117-481 69-354 (360)
138 1jg8_A L-ALLO-threonine aldola 99.9 9.4E-22 3.2E-26 193.6 17.7 317 90-482 20-346 (347)
139 3nyt_A Aminotransferase WBPE; 99.9 2.5E-22 8.5E-27 199.6 13.6 318 88-478 16-360 (367)
140 3e2y_A Kynurenine-oxoglutarate 99.9 1.8E-21 6.3E-26 196.1 19.7 337 88-477 39-408 (410)
141 2po3_A 4-dehydrase; external a 99.9 2.9E-20 9.8E-25 188.4 28.0 326 87-482 31-386 (424)
142 1cs1_A CGS, protein (cystathio 99.9 2.5E-20 8.7E-25 186.4 26.9 282 114-479 53-384 (386)
143 1ax4_A Tryptophanase; tryptoph 99.9 5.1E-21 1.8E-25 196.3 22.1 355 75-482 44-441 (467)
144 2ez2_A Beta-tyrosinase, tyrosi 99.9 8.8E-20 3E-24 186.6 30.6 318 104-482 70-431 (456)
145 3ju7_A Putative PLP-dependent 99.9 5E-21 1.7E-25 190.7 20.3 307 108-480 35-373 (377)
146 3rq1_A Aminotransferase class 99.9 1.7E-20 5.9E-25 189.6 24.6 333 87-483 58-416 (418)
147 3jtx_A Aminotransferase; NP_28 99.9 2.1E-20 7E-25 187.5 24.7 323 88-479 46-395 (396)
148 3ri6_A O-acetylhomoserine sulf 99.9 5.7E-21 2E-25 192.9 20.7 240 115-409 84-355 (430)
149 2r2n_A Kynurenine/alpha-aminoa 99.9 3.2E-20 1.1E-24 188.1 25.9 323 105-482 74-424 (425)
150 3p1t_A Putative histidinol-pho 99.9 7.4E-20 2.5E-24 179.2 27.1 280 116-480 54-335 (337)
151 3pj0_A LMO0305 protein; struct 99.9 4.1E-20 1.4E-24 182.7 25.4 293 115-478 50-358 (359)
152 2oqx_A Tryptophanase; lyase, p 99.9 1.8E-20 6.3E-25 192.2 22.4 376 52-482 19-442 (467)
153 3if2_A Aminotransferase; YP_26 99.9 1.7E-20 5.7E-25 191.2 21.8 321 104-485 78-443 (444)
154 1pff_A Methionine gamma-lyase; 99.9 8.7E-21 3E-25 185.6 18.3 279 117-478 2-330 (331)
155 3h7f_A Serine hydroxymethyltra 99.9 1.4E-20 4.8E-25 192.0 20.3 309 109-481 87-413 (447)
156 3fsl_A Aromatic-amino-acid ami 99.9 1.5E-20 5.1E-25 188.6 20.3 325 89-478 48-396 (397)
157 3qgu_A LL-diaminopimelate amin 99.9 7E-20 2.4E-24 186.9 25.5 307 103-481 105-439 (449)
158 1vef_A Acetylornithine/acetyl- 99.9 3.2E-20 1.1E-24 186.2 22.2 290 112-479 86-394 (395)
159 3b1d_A Betac-S lyase; HET: PLP 99.8 3.2E-23 1.1E-27 207.9 0.0 330 90-480 49-391 (392)
160 2ctz_A O-acetyl-L-homoserine s 99.9 7.1E-20 2.4E-24 185.2 24.1 253 113-410 58-346 (421)
161 3ndn_A O-succinylhomoserine su 99.9 5.3E-20 1.8E-24 185.3 22.4 233 112-410 80-335 (414)
162 3t18_A Aminotransferase class 99.8 8.2E-20 2.8E-24 184.3 23.7 347 69-483 40-411 (413)
163 3acz_A Methionine gamma-lyase; 99.8 1.1E-19 3.6E-24 182.0 23.6 217 112-394 58-280 (389)
164 3n75_A LDC, lysine decarboxyla 99.8 1.9E-19 6.4E-24 190.3 26.2 237 116-398 198-456 (715)
165 3ruy_A Ornithine aminotransfer 99.8 1.6E-19 5.4E-24 180.9 23.5 297 113-479 78-391 (392)
166 3ei9_A LL-diaminopimelate amin 99.8 6.7E-20 2.3E-24 186.1 20.9 307 104-480 93-426 (432)
167 2fq6_A Cystathionine beta-lyas 99.8 4.9E-20 1.7E-24 185.4 18.9 284 115-477 84-413 (415)
168 1n8p_A Cystathionine gamma-lya 99.8 4.3E-20 1.5E-24 185.0 18.1 284 114-479 56-392 (393)
169 4f4e_A Aromatic-amino-acid ami 99.8 4.8E-20 1.7E-24 186.5 18.6 326 89-479 71-419 (420)
170 3g7q_A Valine-pyruvate aminotr 99.8 1E-19 3.6E-24 183.6 20.6 338 88-485 49-416 (417)
171 1ajs_A Aspartate aminotransfer 99.8 6.7E-20 2.3E-24 184.8 18.2 327 88-482 51-411 (412)
172 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.8 2.7E-19 9.1E-24 182.0 22.5 327 105-480 58-434 (437)
173 2ord_A Acoat, acetylornithine 99.8 1.9E-19 6.6E-24 180.6 21.0 296 112-481 81-396 (397)
174 3ez1_A Aminotransferase MOCR f 99.8 7E-19 2.4E-23 178.0 25.3 302 118-483 75-416 (423)
175 3fkd_A L-threonine-O-3-phospha 99.8 9.2E-19 3.1E-23 172.5 25.5 280 117-480 54-340 (350)
176 1sff_A 4-aminobutyrate aminotr 99.8 6.2E-18 2.1E-22 171.1 31.5 316 113-482 84-424 (426)
177 3dxv_A Alpha-amino-epsilon-cap 99.8 3.3E-18 1.1E-22 174.0 29.3 318 111-483 84-426 (439)
178 7aat_A Aspartate aminotransfer 99.8 3.1E-19 1.1E-23 179.3 21.2 358 54-479 16-400 (401)
179 1yaa_A Aspartate aminotransfer 99.8 1.6E-19 5.6E-24 182.0 19.0 355 53-481 16-410 (412)
180 3ppl_A Aspartate aminotransfer 99.8 7.5E-19 2.6E-23 178.1 23.7 317 104-483 73-421 (427)
181 4adb_A Succinylornithine trans 99.8 4.1E-19 1.4E-23 178.6 21.5 304 113-484 81-402 (406)
182 3cog_A Cystathionine gamma-lya 99.8 6.6E-19 2.3E-23 176.9 22.2 210 117-393 71-287 (403)
183 2pb2_A Acetylornithine/succiny 99.8 4.9E-19 1.7E-23 179.0 21.0 303 112-484 98-420 (420)
184 3d6k_A Putative aminotransfera 99.8 1.1E-18 3.8E-23 176.5 23.4 319 104-485 71-421 (422)
185 2aeu_A Hypothetical protein MJ 99.8 3.4E-19 1.2E-23 177.4 19.2 299 112-484 57-373 (374)
186 1s0a_A Adenosylmethionine-8-am 99.8 6.7E-18 2.3E-22 171.2 28.8 309 115-483 88-425 (429)
187 3asa_A LL-diaminopimelate amin 99.8 2E-19 6.7E-24 180.8 17.3 306 104-483 70-394 (400)
188 2eh6_A Acoat, acetylornithine 99.8 5.2E-19 1.8E-23 175.9 20.2 288 115-478 72-374 (375)
189 3nx3_A Acoat, acetylornithine 99.8 2.7E-18 9.2E-23 172.1 25.5 300 112-481 77-394 (395)
190 1ibj_A CBL, cystathionine beta 99.8 1E-19 3.4E-24 185.7 15.2 160 113-316 133-298 (464)
191 2ay1_A Aroat, aromatic amino a 99.8 5.1E-19 1.7E-23 177.2 19.9 320 89-478 48-392 (394)
192 3meb_A Aspartate aminotransfer 99.8 6E-18 2E-22 172.5 27.8 355 52-482 35-444 (448)
193 2eo5_A 419AA long hypothetical 99.8 5.4E-18 1.9E-22 171.3 26.8 300 113-482 86-418 (419)
194 3nmy_A Xometc, cystathionine g 99.8 1.5E-18 5.1E-23 173.9 21.7 229 115-410 69-322 (400)
195 1z7d_A Ornithine aminotransfer 99.8 1.4E-17 4.9E-22 168.9 28.2 303 112-483 106-430 (433)
196 3i4j_A Aminotransferase, class 99.8 1.4E-17 4.8E-22 168.9 27.4 331 112-483 71-429 (430)
197 1uu1_A Histidinol-phosphate am 99.8 6.3E-18 2.2E-22 165.5 23.6 270 117-478 60-334 (335)
198 2q7w_A Aspartate aminotransfer 99.8 4.8E-19 1.6E-23 177.5 15.8 318 90-478 49-395 (396)
199 3f6t_A Aspartate aminotransfer 99.8 2.5E-18 8.7E-23 178.8 21.5 360 86-483 117-526 (533)
200 3a8u_X Omega-amino acid--pyruv 99.8 3.2E-17 1.1E-21 167.2 29.1 329 112-482 92-447 (449)
201 3i16_A Aluminum resistance pro 99.8 3E-18 1E-22 172.3 20.3 235 117-409 77-340 (427)
202 2oat_A Ornithine aminotransfer 99.8 7.7E-18 2.6E-22 171.2 23.6 301 114-481 119-438 (439)
203 3jzl_A Putative cystathionine 99.8 2.7E-18 9.2E-23 172.0 19.0 234 116-409 62-323 (409)
204 3tfu_A Adenosylmethionine-8-am 99.8 3.4E-17 1.1E-21 167.2 27.2 316 112-483 117-454 (457)
205 1zod_A DGD, 2,2-dialkylglycine 99.8 1.6E-17 5.5E-22 168.5 24.5 319 113-482 85-432 (433)
206 3n5m_A Adenosylmethionine-8-am 99.8 8.8E-17 3E-21 164.1 28.4 329 111-481 89-451 (452)
207 3i5t_A Aminotransferase; pyrid 99.8 1.5E-16 5.2E-21 163.2 30.0 331 111-484 95-456 (476)
208 4eu1_A Mitochondrial aspartate 99.8 1.2E-17 4E-22 168.3 21.4 351 53-479 28-408 (409)
209 3hmu_A Aminotransferase, class 99.8 7.6E-17 2.6E-21 165.2 27.4 328 112-483 98-453 (472)
210 3gju_A Putative aminotransfera 99.8 1.6E-16 5.5E-21 162.5 29.6 333 112-484 94-458 (460)
211 3dod_A Adenosylmethionine-8-am 99.8 2.8E-16 9.4E-21 160.2 30.9 331 111-484 85-445 (448)
212 4a6r_A Omega transaminase; tra 99.8 2.6E-16 9E-21 160.9 30.7 329 111-483 92-450 (459)
213 3hvy_A Cystathionine beta-lyas 99.8 2E-17 6.8E-22 166.3 20.0 235 116-409 77-340 (427)
214 3oks_A 4-aminobutyrate transam 99.8 2.8E-16 9.6E-21 160.3 28.8 342 86-481 79-450 (451)
215 4ffc_A 4-aminobutyrate aminotr 99.8 4.2E-16 1.4E-20 159.0 28.8 325 111-485 105-452 (453)
216 2cjg_A L-lysine-epsilon aminot 99.7 2.2E-16 7.4E-21 161.0 25.3 317 112-482 100-448 (449)
217 3k28_A Glutamate-1-semialdehyd 99.7 6.3E-17 2.2E-21 164.0 20.7 310 114-482 94-427 (429)
218 3fq8_A Glutamate-1-semialdehyd 99.7 1.1E-16 3.6E-21 162.2 21.7 310 111-481 90-426 (427)
219 3ht4_A Aluminum resistance pro 99.7 3.3E-17 1.1E-21 165.4 17.7 237 115-409 67-329 (431)
220 3l44_A Glutamate-1-semialdehyd 99.7 2.7E-16 9.3E-21 159.5 24.4 313 113-484 95-432 (434)
221 2cy8_A D-phgat, D-phenylglycin 99.7 8.6E-16 3E-20 156.8 27.4 314 111-484 95-437 (453)
222 2epj_A Glutamate-1-semialdehyd 99.7 3.5E-16 1.2E-20 158.7 24.2 315 112-483 95-432 (434)
223 1ohv_A 4-aminobutyrate aminotr 99.7 6.4E-16 2.2E-20 158.4 25.5 311 111-482 108-471 (472)
224 3ou5_A Serine hydroxymethyltra 99.7 5.9E-16 2E-20 151.7 22.6 313 105-480 92-439 (490)
225 4e77_A Glutamate-1-semialdehyd 99.7 1.1E-15 3.9E-20 154.8 25.4 311 113-481 93-428 (429)
226 3k7y_A Aspartate aminotransfer 99.7 9.7E-16 3.3E-20 153.5 18.7 326 87-481 49-404 (405)
227 3bwn_A AT1G70560, L-tryptophan 99.7 7.4E-15 2.5E-19 146.9 24.0 292 103-481 57-386 (391)
228 2zy4_A L-aspartate beta-decarb 99.7 2.5E-15 8.7E-20 156.3 20.4 349 104-483 133-523 (546)
229 2e7u_A Glutamate-1-semialdehyd 99.6 1.3E-14 4.4E-19 146.7 22.9 309 112-478 91-423 (424)
230 2hox_A ALLIIN lyase 1; cystein 99.6 2.3E-14 7.7E-19 145.0 14.6 306 87-480 71-423 (427)
231 4ao9_A Beta-phenylalanine amin 99.6 3.5E-13 1.2E-17 135.8 22.5 307 113-483 127-447 (454)
232 4e3q_A Pyruvate transaminase; 99.5 2.4E-12 8.4E-17 130.7 24.6 335 112-485 110-471 (473)
233 4atq_A 4-aminobutyrate transam 99.5 6E-11 2.1E-15 120.0 34.6 317 113-481 107-454 (456)
234 4h51_A Aspartate aminotransfer 99.5 1.1E-12 3.9E-17 131.4 20.1 331 90-485 67-420 (420)
235 2yky_A Beta-transaminase; tran 99.2 4.9E-15 1.7E-19 150.3 0.0 310 112-483 139-461 (465)
236 4a0g_A Adenosylmethionine-8-am 99.3 1.6E-10 5.3E-15 125.3 20.5 329 116-482 427-828 (831)
237 3m0z_A Putative aldolase; MCSG 77.7 10 0.00035 33.2 8.3 70 184-266 146-218 (249)
238 4fgs_A Probable dehydrogenase 74.8 17 0.00059 33.2 9.9 67 174-248 55-121 (273)
239 4g81_D Putative hexonate dehyd 70.1 32 0.0011 30.9 10.5 68 172-247 33-103 (255)
240 1tks_A 3,4-dihydroxy-2-butanon 66.9 9.2 0.00031 33.1 5.6 53 213-265 142-194 (204)
241 2pju_A Propionate catabolism o 61.8 46 0.0016 29.3 9.5 69 171-263 107-175 (225)
242 3grp_A 3-oxoacyl-(acyl carrier 59.9 52 0.0018 29.5 10.0 65 175-247 54-118 (266)
243 3mio_A DHBP synthase, 3,4-dihy 59.3 19 0.00065 31.2 6.2 53 213-265 141-194 (206)
244 2q5c_A NTRC family transcripti 56.3 36 0.0012 29.2 7.7 68 172-263 96-163 (196)
245 4dqx_A Probable oxidoreductase 56.1 62 0.0021 29.2 9.8 64 174-246 54-117 (277)
246 3rwb_A TPLDH, pyridoxal 4-dehy 56.0 50 0.0017 29.2 9.0 65 174-246 32-96 (247)
247 2wkj_A N-acetylneuraminate lya 55.6 8.4 0.00029 35.9 3.7 57 209-265 26-85 (303)
248 3gvc_A Oxidoreductase, probabl 55.2 59 0.002 29.4 9.5 64 175-246 56-119 (277)
249 3l21_A DHDPS, dihydrodipicolin 54.7 15 0.0005 34.2 5.3 58 208-265 29-89 (304)
250 4e6p_A Probable sorbitol dehyd 53.0 79 0.0027 28.0 9.9 64 174-246 35-98 (259)
251 3m6y_A 4-hydroxy-2-oxoglutarat 52.7 15 0.00051 32.6 4.4 70 184-266 169-241 (275)
252 3h8q_A Thioredoxin reductase 3 52.4 74 0.0025 24.1 9.9 72 171-252 17-90 (114)
253 3lyl_A 3-oxoacyl-(acyl-carrier 51.9 1.2E+02 0.0041 26.4 11.0 44 198-246 55-98 (247)
254 1f6k_A N-acetylneuraminate lya 51.9 18 0.00061 33.5 5.3 57 209-265 18-78 (293)
255 1g57_A DHBP synthase, 3,4-dihy 51.7 27 0.00093 30.5 6.0 52 213-265 150-201 (217)
256 1xky_A Dihydrodipicolinate syn 51.7 6.6 0.00023 36.6 2.3 57 209-265 27-86 (301)
257 3dz1_A Dihydrodipicolinate syn 51.2 20 0.0007 33.4 5.6 58 208-265 22-81 (313)
258 3fkr_A L-2-keto-3-deoxyarabona 51.0 13 0.00045 34.7 4.3 61 203-265 19-82 (309)
259 4eso_A Putative oxidoreductase 50.2 62 0.0021 28.7 8.7 64 174-246 35-98 (255)
260 4ibo_A Gluconate dehydrogenase 49.2 1.2E+02 0.0042 27.1 10.6 65 174-246 52-119 (271)
261 1snn_A DHBP synthase, 3,4-dihy 49.2 31 0.0011 30.3 6.0 52 213-265 161-212 (227)
262 3s5o_A 4-hydroxy-2-oxoglutarat 48.8 18 0.00061 33.7 4.8 61 203-265 25-88 (307)
263 3o38_A Short chain dehydrogena 48.0 97 0.0033 27.4 9.7 45 197-246 73-117 (266)
264 3flu_A DHDPS, dihydrodipicolin 47.8 16 0.00053 33.9 4.2 57 209-265 22-81 (297)
265 4dpp_A DHDPS 2, dihydrodipicol 47.6 22 0.00076 33.9 5.3 58 208-265 73-133 (360)
266 2r8w_A AGR_C_1641P; APC7498, d 47.0 19 0.00063 34.0 4.6 57 209-265 49-108 (332)
267 3b4u_A Dihydrodipicolinate syn 46.7 17 0.00058 33.6 4.2 51 209-259 18-68 (294)
268 3l6e_A Oxidoreductase, short-c 45.8 70 0.0024 27.9 8.2 64 174-246 30-93 (235)
269 3si9_A DHDPS, dihydrodipicolin 45.7 14 0.00049 34.5 3.6 58 208-265 36-96 (315)
270 3tfo_A Putative 3-oxoacyl-(acy 45.6 1E+02 0.0034 27.6 9.3 44 198-246 54-97 (264)
271 3imf_A Short chain dehydrogena 45.4 1.3E+02 0.0046 26.4 10.2 66 174-245 33-98 (257)
272 3h7a_A Short chain dehydrogena 45.3 1.1E+02 0.0039 26.9 9.6 43 198-246 57-99 (252)
273 2nuw_A 2-keto-3-deoxygluconate 45.0 15 0.0005 33.9 3.5 51 209-259 14-64 (288)
274 3tak_A DHDPS, dihydrodipicolin 44.7 15 0.00052 33.9 3.6 57 209-265 16-75 (291)
275 3op4_A 3-oxoacyl-[acyl-carrier 44.1 89 0.003 27.5 8.7 64 175-246 36-99 (248)
276 1hxh_A 3BETA/17BETA-hydroxyste 44.0 1.6E+02 0.0056 25.7 10.6 64 174-246 33-96 (253)
277 3qze_A DHDPS, dihydrodipicolin 43.6 16 0.00055 34.2 3.6 58 208-265 37-97 (314)
278 3na8_A Putative dihydrodipicol 43.5 19 0.00066 33.6 4.1 58 208-265 38-98 (315)
279 3cpr_A Dihydrodipicolinate syn 43.4 24 0.00082 32.8 4.8 57 209-265 31-90 (304)
280 2hmc_A AGR_L_411P, dihydrodipi 43.2 27 0.00091 33.1 5.1 57 209-265 41-97 (344)
281 3m1a_A Putative dehydrogenase; 42.9 1.2E+02 0.0042 27.0 9.6 58 181-246 38-95 (281)
282 4dyv_A Short-chain dehydrogena 42.8 1.2E+02 0.004 27.2 9.4 59 174-241 55-113 (272)
283 2v9d_A YAGE; dihydrodipicolini 42.8 21 0.00071 33.9 4.2 61 203-265 42-105 (343)
284 3n74_A 3-ketoacyl-(acyl-carrie 42.2 1.2E+02 0.004 26.8 9.2 59 174-241 36-94 (261)
285 3a5f_A Dihydrodipicolinate syn 41.4 22 0.00074 32.8 4.1 57 208-265 16-75 (291)
286 3sju_A Keto reductase; short-c 41.0 1.2E+02 0.0041 27.2 9.2 44 198-246 74-117 (279)
287 2ojp_A DHDPS, dihydrodipicolin 40.9 23 0.00077 32.7 4.1 57 209-265 16-75 (292)
288 3rih_A Short chain dehydrogena 40.8 1.8E+02 0.0062 26.3 10.5 68 174-247 68-136 (293)
289 1w3i_A EDA, 2-keto-3-deoxy glu 40.6 25 0.00087 32.4 4.4 51 209-259 14-64 (293)
290 3nvt_A 3-deoxy-D-arabino-heptu 40.1 98 0.0033 29.7 8.5 60 212-272 260-323 (385)
291 4fn4_A Short chain dehydrogena 39.6 1E+02 0.0035 27.6 8.2 38 198-240 57-94 (254)
292 3d0c_A Dihydrodipicolinate syn 39.4 20 0.00069 33.5 3.5 57 209-265 27-86 (314)
293 3rpc_A Possible metal-dependen 39.3 1.5E+02 0.0052 26.3 9.5 81 173-261 162-249 (264)
294 3m5v_A DHDPS, dihydrodipicolin 39.2 24 0.00081 32.7 4.0 57 209-265 22-82 (301)
295 3tjr_A Short chain dehydrogena 38.8 1.3E+02 0.0045 27.3 9.2 44 198-246 81-124 (301)
296 3oid_A Enoyl-[acyl-carrier-pro 38.8 1.8E+02 0.0061 25.6 9.9 43 198-245 55-97 (258)
297 3qfe_A Putative dihydrodipicol 38.5 18 0.00061 33.9 3.0 57 209-265 26-85 (318)
298 3h5d_A DHDPS, dihydrodipicolin 38.5 23 0.00078 33.1 3.7 57 209-265 22-81 (311)
299 3v8b_A Putative dehydrogenase, 38.4 1.9E+02 0.0065 25.9 10.2 62 174-241 55-116 (283)
300 4gqr_A Pancreatic alpha-amylas 37.8 13 0.00045 36.9 2.1 31 239-269 69-99 (496)
301 1k4i_A 3,4-dihydroxy-2-butanon 37.5 49 0.0017 29.1 5.4 52 213-265 150-212 (233)
302 3eb2_A Putative dihydrodipicol 37.3 15 0.00052 34.1 2.3 57 209-265 19-78 (300)
303 3e96_A Dihydrodipicolinate syn 36.7 22 0.00076 33.2 3.3 50 209-258 27-76 (316)
304 4fs3_A Enoyl-[acyl-carrier-pro 36.2 2.2E+02 0.0076 25.0 10.1 62 173-240 34-96 (256)
305 3ctg_A Glutaredoxin-2; reduced 35.9 1.5E+02 0.0053 23.0 8.1 72 171-252 37-114 (129)
306 1x1t_A D(-)-3-hydroxybutyrate 35.4 2.3E+02 0.0078 24.8 10.2 42 198-244 56-97 (260)
307 1zco_A 2-dehydro-3-deoxyphosph 35.3 1.1E+02 0.0036 27.6 7.6 62 212-273 141-205 (262)
308 2jah_A Clavulanic acid dehydro 35.2 2E+02 0.007 25.0 9.6 44 198-246 57-100 (247)
309 3ftp_A 3-oxoacyl-[acyl-carrier 34.7 2.3E+02 0.008 25.1 10.0 48 191-246 74-121 (270)
310 4fc7_A Peroxisomal 2,4-dienoyl 34.2 1.5E+02 0.0052 26.4 8.7 42 198-244 78-119 (277)
311 3ghf_A Septum site-determining 34.1 96 0.0033 24.1 6.2 49 212-264 25-78 (120)
312 2ew8_A (S)-1-phenylethanol deh 34.0 2.3E+02 0.0078 24.7 9.7 63 174-244 34-96 (249)
313 2wci_A Glutaredoxin-4; redox-a 33.6 1.8E+02 0.006 23.0 8.1 67 171-250 35-108 (135)
314 3ged_A Short-chain dehydrogena 33.2 1.6E+02 0.0053 26.2 8.3 46 198-248 48-93 (247)
315 2a4k_A 3-oxoacyl-[acyl carrier 33.1 1.7E+02 0.0058 25.9 8.8 62 174-244 33-94 (263)
316 2pcq_A Putative dihydrodipicol 32.9 14 0.00047 34.0 1.2 59 203-265 9-67 (283)
317 3pk0_A Short-chain dehydrogena 32.8 2.3E+02 0.0078 24.9 9.6 44 198-246 61-104 (262)
318 2rhc_B Actinorhodin polyketide 32.7 2.5E+02 0.0084 25.0 9.9 42 198-244 72-113 (277)
319 3tox_A Short chain dehydrogena 32.6 2.7E+02 0.0092 24.8 10.3 62 174-240 34-95 (280)
320 1vl8_A Gluconate 5-dehydrogena 32.3 2.2E+02 0.0074 25.2 9.3 42 198-244 72-113 (267)
321 3u5t_A 3-oxoacyl-[acyl-carrier 32.2 2.4E+02 0.0081 25.0 9.6 44 198-246 78-121 (267)
322 1g94_A Alpha-amylase; beta-alp 31.9 19 0.00065 35.5 2.1 30 240-269 58-87 (448)
323 4dmm_A 3-oxoacyl-[acyl-carrier 31.9 1.7E+02 0.0058 26.0 8.5 44 198-246 79-122 (269)
324 3ezx_A MMCP 1, monomethylamine 31.7 1.4E+02 0.0046 25.9 7.5 89 185-296 112-204 (215)
325 1geg_A Acetoin reductase; SDR 31.6 2.4E+02 0.0083 24.6 9.5 42 198-244 52-93 (256)
326 2yxg_A DHDPS, dihydrodipicolin 31.4 33 0.0011 31.6 3.5 57 209-265 15-74 (289)
327 3kts_A Glycerol uptake operon 31.2 17 0.00058 31.2 1.4 48 213-271 18-67 (192)
328 3tpc_A Short chain alcohol deh 31.2 1.4E+02 0.0048 26.2 7.8 51 185-243 44-94 (257)
329 3edm_A Short chain dehydrogena 31.0 2.7E+02 0.0093 24.4 10.5 44 198-246 59-103 (259)
330 3gdg_A Probable NADP-dependent 30.9 2.7E+02 0.0093 24.3 11.0 48 191-246 70-117 (267)
331 3l77_A Short-chain alcohol deh 30.7 1.5E+02 0.0053 25.4 7.9 45 198-247 53-97 (235)
332 3ai3_A NADPH-sorbose reductase 30.5 2.6E+02 0.0089 24.4 9.6 43 198-245 58-100 (263)
333 2r91_A 2-keto-3-deoxy-(6-phosp 30.4 33 0.0011 31.5 3.4 51 209-259 13-63 (286)
334 3zv4_A CIS-2,3-dihydrobiphenyl 30.4 2E+02 0.0068 25.7 8.8 59 174-241 32-90 (281)
335 1hdc_A 3-alpha, 20 beta-hydrox 30.1 1.7E+02 0.0057 25.7 8.1 62 174-244 32-93 (254)
336 3sz8_A 2-dehydro-3-deoxyphosph 30.1 71 0.0024 29.2 5.4 77 183-270 124-205 (285)
337 3lf2_A Short chain oxidoreduct 30.0 2.7E+02 0.0094 24.4 9.7 45 198-247 60-104 (265)
338 3v2h_A D-beta-hydroxybutyrate 29.9 3E+02 0.01 24.5 10.1 44 198-246 77-120 (281)
339 3oec_A Carveol dehydrogenase ( 29.7 2.3E+02 0.0077 25.9 9.2 45 198-247 108-152 (317)
340 1vr6_A Phospho-2-dehydro-3-deo 29.7 1.7E+02 0.0059 27.6 8.2 60 212-272 224-287 (350)
341 3is3_A 17BETA-hydroxysteroid d 29.7 2E+02 0.007 25.4 8.7 44 198-246 69-112 (270)
342 3r1i_A Short-chain type dehydr 29.6 1.5E+02 0.0052 26.5 7.9 44 198-246 82-125 (276)
343 1w6u_A 2,4-dienoyl-COA reducta 29.5 2.8E+02 0.0097 24.7 9.9 42 198-244 77-118 (302)
344 4egf_A L-xylulose reductase; s 29.5 2.1E+02 0.0071 25.3 8.7 46 192-245 68-113 (266)
345 1o5k_A DHDPS, dihydrodipicolin 29.5 37 0.0013 31.5 3.5 57 209-265 27-86 (306)
346 3cxt_A Dehydrogenase with diff 29.4 2.9E+02 0.0099 24.8 9.8 42 198-244 84-125 (291)
347 3v2g_A 3-oxoacyl-[acyl-carrier 29.4 2.8E+02 0.0096 24.6 9.6 44 198-246 82-125 (271)
348 2ehh_A DHDPS, dihydrodipicolin 29.3 35 0.0012 31.5 3.3 57 209-265 15-74 (294)
349 2c07_A 3-oxoacyl-(acyl-carrier 29.2 2.7E+02 0.0092 24.8 9.6 44 198-246 94-137 (285)
350 1v77_A PH1877P, hypothetical p 29.1 66 0.0023 27.8 5.0 27 245-271 145-172 (212)
351 2cq9_A GLRX2 protein, glutared 29.0 2E+02 0.0068 22.2 7.5 57 171-234 27-85 (130)
352 3bh4_A Alpha-amylase; calcium, 29.0 23 0.0008 35.2 2.2 31 240-270 72-102 (483)
353 3gaf_A 7-alpha-hydroxysteroid 28.7 2.9E+02 0.0098 24.2 9.5 43 198-245 62-104 (256)
354 3pgx_A Carveol dehydrogenase; 28.7 2.4E+02 0.0083 25.0 9.1 44 198-246 78-121 (280)
355 3nyw_A Putative oxidoreductase 28.7 2.8E+02 0.0096 24.1 9.4 44 198-246 60-103 (250)
356 1mxg_A Alpha amylase; hyperthe 28.6 24 0.00081 34.7 2.2 30 240-269 80-109 (435)
357 3l4n_A Monothiol glutaredoxin- 28.6 1.7E+02 0.0057 22.9 6.9 72 171-252 14-90 (127)
358 1vs1_A 3-deoxy-7-phosphoheptul 28.6 2.4E+02 0.0083 25.5 8.8 84 179-272 131-219 (276)
359 1ud2_A Amylase, alpha-amylase; 28.5 24 0.00081 35.1 2.2 31 240-270 74-104 (480)
360 2nly_A BH1492 protein, diverge 28.0 2.7E+02 0.0091 24.7 8.8 89 176-267 34-135 (245)
361 3rkr_A Short chain oxidoreduct 28.0 1.9E+02 0.0064 25.5 8.1 38 198-240 79-116 (262)
362 1hvx_A Alpha-amylase; hydrolas 27.9 24 0.00083 35.4 2.2 31 240-270 75-105 (515)
363 3vup_A Beta-1,4-mannanase; TIM 27.9 54 0.0018 30.0 4.5 23 245-267 88-110 (351)
364 1wpc_A Glucan 1,4-alpha-maltoh 27.8 25 0.00087 34.9 2.3 31 240-270 76-106 (485)
365 3tzq_B Short-chain type dehydr 27.7 2.3E+02 0.0077 25.1 8.7 59 174-241 38-96 (271)
366 3tsc_A Putative oxidoreductase 27.7 2E+02 0.007 25.5 8.4 44 198-246 74-117 (277)
367 2rfg_A Dihydrodipicolinate syn 27.6 34 0.0012 31.6 3.0 50 209-258 15-64 (297)
368 3daq_A DHDPS, dihydrodipicolin 27.6 37 0.0013 31.3 3.2 56 209-265 18-76 (292)
369 1lwj_A 4-alpha-glucanotransfer 27.5 24 0.00082 34.6 2.0 29 241-269 64-92 (441)
370 3dhu_A Alpha-amylase; structur 27.3 25 0.00084 34.6 2.0 29 241-269 78-106 (449)
371 3kzv_A Uncharacterized oxidore 27.2 3.1E+02 0.011 23.8 9.5 60 173-240 29-88 (254)
372 1iy8_A Levodione reductase; ox 27.1 2.8E+02 0.0094 24.4 9.1 39 198-241 65-103 (267)
373 3qiv_A Short-chain dehydrogena 27.0 2.3E+02 0.0077 24.6 8.5 38 198-240 59-96 (253)
374 3gk3_A Acetoacetyl-COA reducta 26.9 2.8E+02 0.0095 24.4 9.1 44 198-246 76-119 (269)
375 2o23_A HADH2 protein; HSD17B10 26.8 3E+02 0.01 23.9 9.3 61 174-243 39-99 (265)
376 3ie7_A LIN2199 protein; phosph 26.7 3.5E+02 0.012 24.5 10.0 58 211-269 114-172 (320)
377 3osu_A 3-oxoacyl-[acyl-carrier 26.4 2.8E+02 0.0096 24.0 8.9 48 191-246 51-98 (246)
378 3ioy_A Short-chain dehydrogena 26.4 1.8E+02 0.0062 26.7 7.9 44 198-246 60-103 (319)
379 1zem_A Xylitol dehydrogenase; 26.0 3.2E+02 0.011 23.9 9.3 39 198-241 57-95 (262)
380 1gcy_A Glucan 1,4-alpha-maltot 26.0 26 0.0009 35.3 2.0 28 241-268 87-114 (527)
381 2hze_A Glutaredoxin-1; thiored 25.9 1.6E+02 0.0056 22.0 6.3 81 171-261 19-110 (114)
382 3o0k_A Aldo/keto reductase; ss 25.7 3.7E+02 0.013 24.2 10.0 63 198-273 155-217 (283)
383 3uve_A Carveol dehydrogenase ( 25.6 2.9E+02 0.0099 24.5 9.1 42 198-244 77-118 (286)
384 2guy_A Alpha-amylase A; (beta- 25.6 27 0.00092 34.7 2.0 30 240-269 91-120 (478)
385 1ht6_A AMY1, alpha-amylase iso 25.6 26 0.0009 33.9 1.9 29 241-269 63-91 (405)
386 1yb1_A 17-beta-hydroxysteroid 25.6 3.4E+02 0.012 23.8 10.3 42 198-244 81-122 (272)
387 1nff_A Putative oxidoreductase 25.5 2.9E+02 0.01 24.2 8.9 44 198-246 54-97 (260)
388 2uvd_A 3-oxoacyl-(acyl-carrier 25.4 3.3E+02 0.011 23.5 9.8 42 198-244 55-96 (246)
389 3s55_A Putative short-chain de 25.3 2.8E+02 0.0096 24.6 8.9 45 198-247 72-116 (281)
390 3qlj_A Short chain dehydrogena 25.3 2.3E+02 0.008 25.9 8.5 44 198-246 87-130 (322)
391 2ht9_A Glutaredoxin-2; thiored 25.2 2.6E+02 0.0089 22.3 7.7 57 171-234 49-107 (146)
392 3qmx_A Glutaredoxin A, glutare 25.1 2E+02 0.007 21.0 6.9 69 171-252 16-87 (99)
393 3ak4_A NADH-dependent quinucli 24.7 3E+02 0.01 24.0 8.9 42 198-244 59-100 (263)
394 3u9l_A 3-oxoacyl-[acyl-carrier 24.7 3.7E+02 0.013 24.6 9.8 48 191-246 56-103 (324)
395 3t7c_A Carveol dehydrogenase; 24.7 2.8E+02 0.0097 24.9 8.8 42 198-244 90-131 (299)
396 2h7i_A Enoyl-[acyl-carrier-pro 24.6 2.9E+02 0.01 24.2 8.8 61 173-241 35-98 (269)
397 2vc6_A MOSA, dihydrodipicolina 24.5 35 0.0012 31.4 2.4 51 209-259 15-65 (292)
398 1x7f_A Outer surface protein; 24.5 79 0.0027 30.3 4.9 60 212-271 38-98 (385)
399 3sc4_A Short chain dehydrogena 24.3 2.7E+02 0.0094 24.8 8.6 51 189-247 60-110 (285)
400 4gkb_A 3-oxoacyl-[acyl-carrier 24.2 3.7E+02 0.013 23.8 10.5 47 188-242 49-95 (258)
401 3a28_C L-2.3-butanediol dehydr 24.1 3E+02 0.01 23.9 8.8 42 198-244 54-95 (258)
402 3ic4_A Glutaredoxin (GRX-1); s 23.9 1.9E+02 0.0066 20.3 8.7 74 171-256 12-90 (92)
403 1wza_A Alpha-amylase A; hydrol 23.9 31 0.001 34.4 2.0 27 242-268 77-103 (488)
404 1fov_A Glutaredoxin 3, GRX3; a 23.9 1.7E+02 0.006 19.8 7.2 32 172-206 2-35 (82)
405 3fs2_A 2-dehydro-3-deoxyphosph 23.8 82 0.0028 29.0 4.7 65 198-270 156-224 (298)
406 4imr_A 3-oxoacyl-(acyl-carrier 23.8 3.1E+02 0.011 24.3 8.8 43 198-246 83-125 (275)
407 1mxh_A Pteridine reductase 2; 23.7 3.7E+02 0.013 23.6 9.3 44 198-246 63-110 (276)
408 4aie_A Glucan 1,6-alpha-glucos 23.6 29 0.00099 35.0 1.8 30 240-269 73-102 (549)
409 1ae1_A Tropinone reductase-I; 23.5 3.8E+02 0.013 23.6 10.5 44 198-246 71-115 (273)
410 3rag_A Uncharacterized protein 23.5 66 0.0023 28.6 3.9 37 230-268 10-46 (242)
411 4iin_A 3-ketoacyl-acyl carrier 23.4 3.4E+02 0.012 23.8 9.0 49 190-246 75-123 (271)
412 1y80_A Predicted cobalamin bin 23.4 2.5E+02 0.0087 23.8 7.8 68 185-268 108-179 (210)
413 1jae_A Alpha-amylase; glycosid 23.3 26 0.00089 34.7 1.3 30 240-269 68-97 (471)
414 2z1k_A (NEO)pullulanase; hydro 23.1 30 0.001 34.3 1.7 29 213-244 95-123 (475)
415 2dh2_A 4F2 cell-surface antige 23.0 33 0.0011 33.5 2.0 30 240-269 75-104 (424)
416 3awd_A GOX2181, putative polyo 23.0 3.7E+02 0.013 23.2 9.8 40 198-242 63-102 (260)
417 3ksu_A 3-oxoacyl-acyl carrier 22.9 2.3E+02 0.008 24.9 7.7 44 198-246 64-107 (262)
418 3ff4_A Uncharacterized protein 22.7 1.2E+02 0.004 23.7 4.8 47 213-269 67-113 (122)
419 4iiu_A 3-oxoacyl-[acyl-carrier 22.7 3.6E+02 0.012 23.6 9.0 44 198-246 77-120 (267)
420 3ucx_A Short chain dehydrogena 22.6 3.9E+02 0.013 23.4 9.5 38 198-240 61-98 (264)
421 2pw9_A Putative formate dehydr 22.2 1.8E+02 0.0061 26.3 6.5 65 181-265 175-242 (268)
422 2aaa_A Alpha-amylase; glycosid 22.2 30 0.001 34.4 1.5 30 240-269 91-120 (484)
423 3kvo_A Hydroxysteroid dehydrog 22.2 3.8E+02 0.013 24.8 9.3 50 189-246 96-145 (346)
424 1j0h_A Neopullulanase; beta-al 22.1 32 0.0011 35.2 1.8 28 242-269 218-245 (588)
425 3pxx_A Carveol dehydrogenase; 21.9 4.1E+02 0.014 23.4 10.0 42 198-244 72-113 (287)
426 1gve_A Aflatoxin B1 aldehyde r 21.7 2.1E+02 0.0073 26.3 7.4 69 198-273 132-200 (327)
427 3rhb_A ATGRXC5, glutaredoxin-C 21.6 2.4E+02 0.0082 20.9 6.5 71 171-250 19-91 (113)
428 2p0o_A Hypothetical protein DU 21.6 1.1E+02 0.0036 29.3 5.0 57 213-269 15-72 (372)
429 2wsb_A Galactitol dehydrogenas 21.4 3.9E+02 0.013 22.9 9.3 54 184-246 47-101 (254)
430 2wc7_A Alpha amylase, catalyti 21.1 34 0.0011 34.1 1.6 29 214-245 102-130 (488)
431 1uta_A FTSN, MSGA, cell divisi 21.1 1.1E+02 0.0038 21.5 4.1 47 427-478 22-69 (81)
432 3svt_A Short-chain type dehydr 21.0 3.3E+02 0.011 24.1 8.5 38 198-240 64-101 (281)
433 3i4f_A 3-oxoacyl-[acyl-carrier 20.9 2.8E+02 0.0096 24.2 7.9 37 198-239 58-94 (264)
434 1m53_A Isomaltulose synthase; 20.9 35 0.0012 34.8 1.8 30 213-245 91-120 (570)
435 1ua7_A Alpha-amylase; beta-alp 20.9 27 0.00091 34.1 0.8 14 288-301 166-179 (422)
436 1ct9_A Asparagine synthetase B 20.8 3E+02 0.01 27.7 8.7 133 111-268 208-348 (553)
437 3ppi_A 3-hydroxyacyl-COA dehyd 20.8 4.3E+02 0.015 23.2 11.9 60 174-243 57-117 (281)
438 2nwr_A 2-dehydro-3-deoxyphosph 20.7 1.8E+02 0.0061 26.2 6.3 65 198-270 119-186 (267)
439 3rjz_A N-type ATP pyrophosphat 20.6 3.6E+02 0.012 23.7 8.1 99 139-264 7-120 (237)
440 2bp1_A Aflatoxin B1 aldehyde r 20.4 2.3E+02 0.0079 26.6 7.4 69 198-273 165-233 (360)
441 1qwg_A PSL synthase;, (2R)-pho 20.3 4.6E+02 0.016 23.3 8.9 76 184-268 89-169 (251)
442 1ea9_C Cyclomaltodextrinase; h 20.1 36 0.0012 34.8 1.7 29 241-269 213-241 (583)
443 1wzl_A Alpha-amylase II; pullu 20.1 34 0.0012 35.0 1.5 26 243-268 216-241 (585)
444 3bc9_A AMYB, alpha amylase, ca 20.0 44 0.0015 34.4 2.3 30 240-269 202-231 (599)
445 2qv5_A AGR_C_5032P, uncharacte 20.0 4.7E+02 0.016 23.3 10.3 94 172-268 57-163 (261)
No 1
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=100.00 E-value=1e-73 Score=588.84 Aligned_cols=464 Identities=41% Similarity=0.825 Sum_probs=403.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHhhcCCCCCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCcceec
Q 038818 1 MDSEEFRRQGHMIIDFIADYYRDVEKYPVLSQVEPGYLRKRLPESAPYNPEPIETILQDVQQHIVPGITHWQSPYYFAYF 80 (486)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~ 80 (486)
||.++||+.++++++.+.+|+++++++||.+..+|++++..++..+|++|.+.+++++++.+.+.++..+|+||+|+||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (475)
T 3k40_A 1 MEAPEFKDFAKTMVDFIAEYLENIRERRVLPEVKPGYLKPLIPDAAPEKPEKWQDVMQDIERVIMPGVTHWHSPKFHAYF 80 (475)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTGGGSCSSCSSCTTCSGGGSCSSCCSSCCCHHHHHHHHHHHTGGGCCCTTCTTBCCSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhccCCCCCCcCceeeC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCcc--CCCcceEEcCCchHHHHHHHHHHH
Q 038818 81 PSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLF--SGTGGGVIQGTTCEAILCTLAAAR 158 (486)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~--~~~~~~~~t~ggt~a~~~al~~a~ 158 (486)
++++.+++++++++++.+|+|...|..+|..+++|+++++|+++++|++..+.. .+.++|++|+|||+||+.|+.++|
T Consensus 81 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar 160 (475)
T 3k40_A 81 PTANSYPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAK 160 (475)
T ss_dssp CCCCCHHHHHHHHHHHHHCCCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHhCccccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999875321 123479999999999999999999
Q ss_pred HHHHHHccccC--------CCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCc
Q 038818 159 DQILNEIGREN--------ISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLI 230 (486)
Q Consensus 159 ~~~~~~~~~~~--------~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~ 230 (486)
++..++.+..+ .++.+|+++..+|+|+.+++++.|+ +++.||+|+ ++ ||+++|+++|++++++|..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~---~~~~v~~d~--~~-~d~~~L~~~i~~~~~~~~~ 234 (475)
T 3k40_A 161 AKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGV---KLRSVQSEN--HR-MRGAALEKAIEQDVAEGLI 234 (475)
T ss_dssp HHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTC---EEEEECCBT--TB-CCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHhhccCcccccccccCCeEEEECCCchHHHHHHHHHcCC---ceEEEECCC--CC-cCHHHHHHHHHHHHHCCCc
Confidence 87654321111 1467899999999999999999999 999999985 68 9999999999999888888
Q ss_pred cEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEE
Q 038818 231 PLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLW 310 (486)
Q Consensus 231 p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~ 310 (486)
|++|++++++|++|.+||+++|+++|++||+|+|||+||+++.++.+.++..+.+++.+||+++++|||+++|++||+++
T Consensus 235 ~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~ 314 (475)
T 3k40_A 235 PFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMW 314 (475)
T ss_dssp EEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEE
T ss_pred cEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEE
Confidence 99999999999999999999999999999999999999999888888888888888899999999999999999999999
Q ss_pred eeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC
Q 038818 311 VKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGD 390 (486)
Q Consensus 311 ~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 390 (486)
++++..+.+.+...++|+..... +...++.+++++++|++.++++|++++.+|.+|+++++++..++++++++.|+++
T Consensus 315 ~~~~~~l~~~~~~~~~yl~~~~~--~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 392 (475)
T 3k40_A 315 LKDPSWVVNAFNVDPLYLKHDMQ--GSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVAD 392 (475)
T ss_dssp ESSGGGC-----------------------------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred EeCHHHHHHHhcCCccccCCCcC--CCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99987766667777888865321 2345677889999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHH
Q 038818 391 NRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIA 470 (486)
Q Consensus 391 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~ 470 (486)
|+++++.++.+++++|++.+. +..+.++.++|.++|.++++++.+.+..++|+++++++++++||++
T Consensus 393 ~g~~l~~~~~~~iv~f~~~~~-------------~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~ 459 (475)
T 3k40_A 393 SRFELAAEINMGLVCFRLKGS-------------NERNEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFTQSEDMEY 459 (475)
T ss_dssp TTEEESSCCBTTEEEEEESSC-------------HHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHH
T ss_pred CCEEEecCCceEEEEEEeCCc-------------hHHHHHHHHHHHhCCcEEEEeeEECCEEEEEEEeCCCCCCHHHHHH
Confidence 999999888899999998753 4567788999999999888888899999999999999999999999
Q ss_pred HHHHHHHHHHHHhhc
Q 038818 471 AWKVVQEKLDGILAT 485 (486)
Q Consensus 471 ~i~~l~~~~~~l~~~ 485 (486)
+++.|++++++++++
T Consensus 460 ~~~~i~~~~~~~~~~ 474 (475)
T 3k40_A 460 SWKEVSAAADEMEQE 474 (475)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999998865
No 2
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.7e-73 Score=586.13 Aligned_cols=464 Identities=43% Similarity=0.805 Sum_probs=422.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHhhcCCCCCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCcceec
Q 038818 1 MDSEEFRRQGHMIIDFIADYYRDVEKYPVLSQVEPGYLRKRLPESAPYNPEPIETILQDVQQHIVPGITHWQSPYYFAYF 80 (486)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~ 80 (486)
||.++||+.++++++.+.+|+++++++||.+..+|++++..++..+|++|.+.+++++++.+.+.++..+|+||+|++|+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 85 (481)
T 4e1o_A 6 MEPEEYRERGREMVDYICQYLSTVRERRVTPDVQPGYLRAQLPESAPEDPDSWDSIFGDIERIIMPGVVHWQSPHMHAYY 85 (481)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHSGGGSCSSCCCCTTTTGGGSCSSCCSSCCCHHHHHHHHHHHTGGGCCCTTSTTBCSSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCcc---CCCcceEEcCCchHHHHHHHHHH
Q 038818 81 PSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLF---SGTGGGVIQGTTCEAILCTLAAA 157 (486)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~---~~~~~~~~t~ggt~a~~~al~~a 157 (486)
++++++|+++++++.+.+|++...|..+|..+++|+++.+|+++++|++..+.. .+.++|++|+|||+||++|+.++
T Consensus 86 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~a 165 (481)
T 4e1o_A 86 PALTSWPSLLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAA 165 (481)
T ss_dssp CCCCCHHHHHHHHHHHHHCCCCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhCcccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999875321 12347899999999999999999
Q ss_pred HHHHHHHccccC--------CCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCC
Q 038818 158 RDQILNEIGREN--------ISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGL 229 (486)
Q Consensus 158 ~~~~~~~~~~~~--------~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~ 229 (486)
|++..++.+..+ .++.+|+++..+|+|+.+++++.|. +++.||+++ +++||+++|+++|++++++|.
T Consensus 166 r~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~---~~~~v~~~~--~~~~d~~~Le~~i~~~~~~g~ 240 (481)
T 4e1o_A 166 RKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLV---KMKFLPVDD--NFSLRGEALQKAIEEDKQRGL 240 (481)
T ss_dssp HHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTC---EEEEECCCT--TSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCC---ceEEEEcCC--CCcCCHHHHHHHHHHHHhCCC
Confidence 987654321111 1678999999999999999999999 999999974 679999999999999988888
Q ss_pred ccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEE
Q 038818 230 IPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCL 309 (486)
Q Consensus 230 ~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~ 309 (486)
.|++|++++|+|++|.+|||++|+++|++||+|+|||+||+++.+.+++++..+.+++.+||+++++|||+++|++||++
T Consensus 241 ~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l 320 (481)
T 4e1o_A 241 VPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGF 320 (481)
T ss_dssp EEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEE
T ss_pred CcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCceEEE
Confidence 89999999999999999999999999999999999999999998888888888888889999999999999999999999
Q ss_pred EeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhC
Q 038818 310 WVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGG 389 (486)
Q Consensus 310 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~ 389 (486)
+++++..+.+.+...+.|+..... ....++.+++++++|++.++++|++++.+|.+|+++++++..++++++++.|++
T Consensus 321 ~~~~~~~l~~~~~~~~~yl~~~~~--~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~ 398 (481)
T 4e1o_A 321 WVKDKYKLQQTFSVNPIYLRHANS--GVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRN 398 (481)
T ss_dssp EESBHHHHHTTTCCCCGGGCCTTT--TTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeCHHHHHHHhcCCchhccCccc--CCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999998877777778889876432 334567788999999999999999999999999999999999999999999999
Q ss_pred CCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHH
Q 038818 390 DNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVI 469 (486)
Q Consensus 390 ~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did 469 (486)
+|+|+++.++.+++++|++.+. +..+.++.+++.++|.++++++.+.+..++|+++++++++++||+
T Consensus 399 ~~g~~~~~~~~~~~v~f~~~~~-------------~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~ 465 (481)
T 4e1o_A 399 DPSFEIPAKRHLGLVVFRLKGP-------------NSLTENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDDIL 465 (481)
T ss_dssp CTTEECCSCCCSSEEEEEESSC-------------HHHHHHHHHHHHHHCSSBCEEEEETTEEEEEEECCCTTCCHHHHH
T ss_pred CCCeEEecCCceeEEEEEeCCc-------------hHHHHHHHHHHHhCCeEEEEeeEECCEEEEEEEeCCCCCCHHHHH
Confidence 9999998888899999998653 456778899999999877888888999999999999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 038818 470 AAWKVVQEKLDGILA 484 (486)
Q Consensus 470 ~~i~~l~~~~~~l~~ 484 (486)
++++.|+++++++++
T Consensus 466 ~~~~~i~~~~~~l~~ 480 (481)
T 4e1o_A 466 RDWNLIRDAATLILS 480 (481)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999988764
No 3
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=100.00 E-value=3.5e-68 Score=550.78 Aligned_cols=466 Identities=43% Similarity=0.854 Sum_probs=404.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHhhcCCCCCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCcceec
Q 038818 1 MDSEEFRRQGHMIIDFIADYYRDVEKYPVLSQVEPGYLRKRLPESAPYNPEPIETILQDVQQHIVPGITHWQSPYYFAYF 80 (486)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~ 80 (486)
||.++||++++++++.+.+|+++++++||.+..+|++++..++..+|++|.+.+++++++.+.+.++..+|+||+|+||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (486)
T 1js3_A 1 MNASDFRRRGKEMVDYMADYLEGIEGRQVYPDVQPGYLRPLIPATAPQEPDTFEDILQDVEKIIMPGVTHWHSPYFFAYF 80 (486)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTGGGSCSSCCCCTTCSGGGSCSSCCSSCCCHHHHHHHHHHTTGGGCCCTTSTTBCSSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCHHHHHHhccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCceEeC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCcc--CCCcceEEcCCchHHHHHHHHHHH
Q 038818 81 PSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLF--SGTGGGVIQGTTCEAILCTLAAAR 158 (486)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~--~~~~~~~~t~ggt~a~~~al~~a~ 158 (486)
++++.+++.+++++++++|++...|..+|...++|+++++|+++++|++..+.. .+.++|++|+|||+||+.|+.+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~ 160 (486)
T 1js3_A 81 PTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAAR 160 (486)
T ss_dssp CCCCCHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999864211 012368999999999999999998
Q ss_pred HHHHHHcccc-C-------CCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCc
Q 038818 159 DQILNEIGRE-N-------ISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLI 230 (486)
Q Consensus 159 ~~~~~~~~~~-~-------~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~ 230 (486)
+...++.+.. | .++.+|+++..+|+|+.++++.+|+ +++.||+|+ +|+||+++|+++|++++++|..
T Consensus 161 ~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~---~v~~v~~d~--~~~~d~~~L~~~i~~~~~~g~~ 235 (486)
T 1js3_A 161 TKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGV---KLKAIPSDG--KFAMRASALQEALERDKAAGLI 235 (486)
T ss_dssp HHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTC---EEEEECCCT--TSCCCHHHHHHHHHHHHHTTCE
T ss_pred HHHhhhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCC---ceEEeecCC--CCCCCHHHHHHHHHHHHhCCCC
Confidence 7644321110 1 0245788999999999999999999 999999974 6899999999999999988989
Q ss_pred cEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEE
Q 038818 231 PLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLW 310 (486)
Q Consensus 231 p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~ 310 (486)
|++|++++|+|++|.++|+++|+++|++||+|+|||+||+++.+.+++++..+.+++++|++++++|||+++|++||+++
T Consensus 236 p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~l~ 315 (486)
T 1js3_A 236 PFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMW 315 (486)
T ss_dssp EEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEE
T ss_pred ceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcceEEEE
Confidence 99999999999999999999999999999999999999999888887788777788899999999999999999999999
Q ss_pred eeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC
Q 038818 311 VKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGD 390 (486)
Q Consensus 311 ~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 390 (486)
++++..+.+.+...+.|+...........++.+++++++|++.++++|++++.+|.+++++++++..++++++.+.|+++
T Consensus 316 ~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 395 (486)
T 1js3_A 316 VKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQD 395 (486)
T ss_dssp ESCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EeCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99987666666666778765322112335566778899999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHH
Q 038818 391 NRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIA 470 (486)
Q Consensus 391 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~ 470 (486)
|+++++.+|.+++++|++.+. +..+.++.++|.++|+++++++.+.+..++|++++++.++++||++
T Consensus 396 ~~~~~~~~~~~~~v~f~~~~~-------------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ 462 (486)
T 1js3_A 396 PRFEVCAEVTLGLVCFRLKGS-------------DGLNEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRL 462 (486)
T ss_dssp TTEEECSCCCSSEEEEEESSC-------------HHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHH
T ss_pred CCeEEeCCCceeEEEEEecCh-------------HHHHHHHHHHHHhcCCEEEEEEEECCEEEEEEEeCCCCCCHHHHHH
Confidence 999998878889999998643 3456788888888898777777888889999999899999999999
Q ss_pred HHHHHHHHHHHHhh
Q 038818 471 AWKVVQEKLDGILA 484 (486)
Q Consensus 471 ~i~~l~~~~~~l~~ 484 (486)
+++.|+++++++.+
T Consensus 463 ~~~~l~~~~~~~~~ 476 (486)
T 1js3_A 463 AWEHIRGLAAELLA 476 (486)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999887764
No 4
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=100.00 E-value=3.5e-67 Score=544.71 Aligned_cols=474 Identities=23% Similarity=0.367 Sum_probs=412.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCC--CCCCCCChhHHhhc---CCCCCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCc
Q 038818 2 DSEEFRRQGHMIIDFIADYYRDVEKY--PVLSQVEPGYLRKR---LPESAPYNPEPIETILQDVQQHIVPGITHWQSPYY 76 (486)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~~~---~~~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~ 76 (486)
+.+++++.++++++.+.+|+++..++ +|.+..+|++++.. ++..+|++|.+.++|++++.+.+.++ ..++||+|
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~p~f 98 (511)
T 3vp6_A 20 GEEQTVQFLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYG-VRTGHPRF 98 (511)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTCTTSCSCCCCCHHHHHHCBTTBCCCCCSSCCCHHHHHHHHHHHHHTS-CCTTSTTE
T ss_pred ChHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHhhcc-CCCCCCCc
Confidence 45789999999999999999998765 47788999999999 89999999999999999999887666 55799999
Q ss_pred ceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHH
Q 038818 77 FAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAA 156 (486)
Q Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~ 156 (486)
+||+++++.+++++++++++.+|++...|..+|..+++|+++++|+++++|++... .++++|+|||+||+.|+.+
T Consensus 99 ~~~~~~~~~~~~~~~e~l~~~~~~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~-----~~~~~t~ggt~a~~~al~~ 173 (511)
T 3vp6_A 99 FNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKD-----GDGIFSPGGAISNMYSIMA 173 (511)
T ss_dssp ESSSSCCCCHHHHHHHHHHHHHCCCSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSS-----CEEEEESSHHHHHHHHHHH
T ss_pred eEeecCCCcHHHHHHHHHHHHhccCCCCcccCchHHHHHHHHHHHHHHHhCCCCCC-----CceEECCchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998531 3799999999999999999
Q ss_pred HHHHHHH---HccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEE
Q 038818 157 ARDQILN---EIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLF 233 (486)
Q Consensus 157 a~~~~~~---~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~ 233 (486)
++++..+ +.|..+.++.+|++|..+|+|+.++++.+|+|..+++.||+++ +|+||+++|+++|+++.++|..|++
T Consensus 174 a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d~--~~~~d~~~Le~~i~~~~~~g~~~~~ 251 (511)
T 3vp6_A 174 ARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNE--RGKIIPADFEAKILEAKQKGYVPFY 251 (511)
T ss_dssp HHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhhhhhhhcCcccCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecCC--CCccCHHHHHHHHHHHHhcCCCcEE
Confidence 9886421 2233334678999999999999999999999887899999985 5799999999999998888988999
Q ss_pred EEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeC
Q 038818 234 LCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKN 313 (486)
Q Consensus 234 vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~ 313 (486)
|++++++|++|.+|||++|+++|++||+|+|||+||+++.+.+++++..+.|++++||+++++|||+++|.+||++++++
T Consensus 252 vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~ 331 (511)
T 3vp6_A 252 VNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKE 331 (511)
T ss_dssp EEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESS
T ss_pred EEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeC
Confidence 99999999999999999999999999999999999999999999888888888999999999999999999999999999
Q ss_pred chHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCe
Q 038818 314 PNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRF 393 (486)
Q Consensus 314 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~ 393 (486)
+..+...+...++|+...........++.+++++++|++.++++|++++.+|.+|+++++++..++++++++.|+++|+|
T Consensus 332 ~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~ 411 (511)
T 3vp6_A 332 KGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEF 411 (511)
T ss_dssp TTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTE
T ss_pred HHHHHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 98877778888899876543334456678899999999999999999999999999999999999999999999999999
Q ss_pred EEec--CCCeeEEEEEeecCCCCCCCCC--CccchHHHHHHHHHHHHhcCcEEEeeeeECC-EeEEEEEecCCCCcHHHH
Q 038818 394 EIVA--PRNFAVVCFRVLPSASGLGDGK--ANEGANELNRKLLESINASGQLYVSHGMVAG-IYFIRFAVGATLTEDRHV 468 (486)
Q Consensus 394 ~~~~--~~~~~~v~f~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-~~~lR~~~~~~~tt~~di 468 (486)
+++. +|.+++++|++.|...+..+.. .....+..+.++.++|.++|++++..+...+ ..++|++++++.++++||
T Consensus 412 ~l~~~~~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di 491 (511)
T 3vp6_A 412 EMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDI 491 (511)
T ss_dssp EESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHH
T ss_pred EEEecCCCCeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEecCCCCCHHHH
Confidence 9987 5788999999876532110000 0012345566889999999987776555554 468999999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 038818 469 IAAWKVVQEKLDGIL 483 (486)
Q Consensus 469 d~~i~~l~~~~~~l~ 483 (486)
+++++.|+++++.+-
T Consensus 492 ~~ll~~i~~~~~~~~ 506 (511)
T 3vp6_A 492 DFLIEEIERLGQDLH 506 (511)
T ss_dssp HHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999999987653
No 5
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=100.00 E-value=1.5e-64 Score=525.75 Aligned_cols=475 Identities=23% Similarity=0.370 Sum_probs=400.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCC--CCCCCCChhHHhhc---CCCCCCCCCCCHHHHHHHHHhhhcCCCcCCCCCC
Q 038818 1 MDSEEFRRQGHMIIDFIADYYRDVEKY--PVLSQVEPGYLRKR---LPESAPYNPEPIETILQDVQQHIVPGITHWQSPY 75 (486)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~~~---~~~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~ 75 (486)
|+.++|++.++++++.+.+|++++.++ ||.+.++|++++.. ++..+|++|.+.+++++++++.+.++.. +.||+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~p~ 94 (504)
T 2okj_A 16 NGEEQTVQFLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYGVR-TGHPR 94 (504)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHTCTTSCSCCCCCHHHHHSCBTTBCCCCCSSCCCHHHHHHHHHHHHHTSCC-TTCTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHHhhccCC-CCCCC
Confidence 689999999999999999999998764 59999999999999 9999999999999999999887766654 45999
Q ss_pred cceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHH
Q 038818 76 YFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLA 155 (486)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~ 155 (486)
|++|+++++.+++++++++++++|++...|..+|..+++|.++++|+++++|++.+ ..++++|+|||+||++++.
T Consensus 95 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~-----~~~~~~t~ggtea~~~al~ 169 (504)
T 2okj_A 95 FFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSK-----DGDGIFSPGGAISNMYSIM 169 (504)
T ss_dssp EESSSSCCCCHHHHHHHHHHHHHCCBSSCTTTCHHHHHHHHHHHHHHHHHHTCCSS-----SCEEEEESSHHHHHHHHHH
T ss_pred EEEEccCCCCHHHHHHHHHHHhhccCCCchhhChHHHHHHHHHHHHHHHHhCCCCC-----CCCEEEeCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999831 1279999999999999999
Q ss_pred HHHHHHHH---HccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccE
Q 038818 156 AARDQILN---EIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPL 232 (486)
Q Consensus 156 ~a~~~~~~---~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~ 232 (486)
+++.+..+ +.|....++.+|+++..+|+|+.++++.+|+|.++++.||+++ +|+||+++|+++|+++.++|..|+
T Consensus 170 ~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~g~~~~ 247 (504)
T 2okj_A 170 AARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNE--RGKIIPADFEAKILEAKQKGYVPF 247 (504)
T ss_dssp HHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHHcCCCcccEEEEecCC--CCCCCHHHHHHHHHHHHHCCCCce
Confidence 99875321 1111111255899999999999999999998766799999975 679999999999998888888899
Q ss_pred EEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEee
Q 038818 233 FLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVK 312 (486)
Q Consensus 233 ~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~ 312 (486)
+|++++|+|++|.++|+++|+++|++||+|+|||+||+++.+.+++++..+.+++++|++++++|||+++|++||+++++
T Consensus 248 ~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~ 327 (504)
T 2okj_A 248 YVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVK 327 (504)
T ss_dssp EEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEES
T ss_pred EEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEE
Confidence 99999999999999999999999999999999999999998888877777788889999999999999999999999999
Q ss_pred CchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 038818 313 NPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNR 392 (486)
Q Consensus 313 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~ 392 (486)
++..+...+...++|+...........++.+++++++|++.++++|++++.+|.+|+++++++..++++++.+.|+++|+
T Consensus 328 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~ 407 (504)
T 2okj_A 328 EKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREE 407 (504)
T ss_dssp STTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred CHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 98666666667788886543222233567778899999999999999999999999999999999999999999999999
Q ss_pred eEEec--CCCeeEEEEEeecCCCCC-CCCCC-ccchHHHHHHHHHHHHhcCcEEEeeeeECCE-eEEEEEecCCCCcHHH
Q 038818 393 FEIVA--PRNFAVVCFRVLPSASGL-GDGKA-NEGANELNRKLLESINASGQLYVSHGMVAGI-YFIRFAVGATLTEDRH 467 (486)
Q Consensus 393 ~~~~~--~~~~~~v~f~~~~~~~~~-~~~~~-~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~-~~lR~~~~~~~tt~~d 467 (486)
++++. +|..++++|++.+..... .++.+ ....+..+.++.+.|.++|++++.++.+.+. .++|++++|+.++++|
T Consensus 408 ~~~~~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~ed 487 (504)
T 2okj_A 408 FEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSD 487 (504)
T ss_dssp EEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHH
T ss_pred EEEEecCCCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHH
Confidence 99987 577889999886431000 00000 0011223567888899999877776667664 7999999889999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 038818 468 VIAAWKVVQEKLDGIL 483 (486)
Q Consensus 468 id~~i~~l~~~~~~l~ 483 (486)
|+++++.|+++++++.
T Consensus 488 i~~~~~~l~~~~~~~~ 503 (504)
T 2okj_A 488 IDFLIEEIERLGQDLH 503 (504)
T ss_dssp HHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999887653
No 6
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=100.00 E-value=2.2e-63 Score=517.97 Aligned_cols=471 Identities=22% Similarity=0.344 Sum_probs=393.3
Q ss_pred CCHHHHHHHHHHHHHHHHH-HHHhcCC--CCCCCCCChhHHhhcCCCCCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCcc
Q 038818 1 MDSEEFRRQGHMIIDFIAD-YYRDVEK--YPVLSQVEPGYLRKRLPESAPYNPEPIETILQDVQQHIVPGITHWQSPYYF 77 (486)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~p~~~~~~~~~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~~ 77 (486)
|+.++|++.++++++.+.+ |+++..+ .||.+..+|++++..++..+|++|.+.+++++++++.+.++.. +.||+|+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~ 112 (515)
T 2jis_A 34 GDPVAVEALLRAVFGVVVDEAIQKGTSVSQKVCEWKEPEELKQLLDLELRSQGESQKQILERCRAVIRYSVK-TGHPRFF 112 (515)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTTGGGCTTSCSCCCCCHHHHHHHHCCCCCSSCCCHHHHHHHHHHHHHHSCC-TTSTTEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCHHHHHhhcccCCCCCCCCHHHHHHHHHHHhcCCCC-CCCCCeE
Confidence 6899999999999999999 9998765 4999999999999999999999999999999999987666654 4599999
Q ss_pred eecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHH
Q 038818 78 AYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAA 157 (486)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a 157 (486)
+|+++++.++++++++++.++|++...|..+|...++|.++++|+++++|++.. ++++|+|||+||+.|+.++
T Consensus 113 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~~~~~~la~l~g~~~~-------~~~~t~ggtea~~~al~~a 185 (515)
T 2jis_A 113 NQLFSGLDPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGWSSG-------DGIFCPGGSISNMYAVNLA 185 (515)
T ss_dssp SSSCCCCCHHHHHHHHHHHHHCCCTTCTTTCHHHHHHHHHHHHHHHHHHTCSSC-------EEEEESSHHHHHHHHHHHH
T ss_pred EEeeCCCCHHHHHHHHHHHHhccCCCchhhchHHHHHHHHHHHHHHHHhCCCCC-------CeEEcCCcHHHHHHHHHHH
Confidence 999999999999999999988999889999999999999999999999999854 7999999999999999999
Q ss_pred HHHHH---HHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEE
Q 038818 158 RDQIL---NEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFL 234 (486)
Q Consensus 158 ~~~~~---~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~v 234 (486)
|.+.. +..|..+.++.+|+++..+|+|+.++++.+|+|..+++.||+++ +++||+++|+++|+++..+|..|.+|
T Consensus 186 r~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~g~~~~~V 263 (515)
T 2jis_A 186 RYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKADE--RGKMVPEDLERQIGMAEAEGAVPFLV 263 (515)
T ss_dssp HHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHcCCCCCcEEEEecCC--CCcCCHHHHHHHHHHHHhCCCCcEEE
Confidence 87542 11122122356899999999999999999999776899999975 67999999999999888778788999
Q ss_pred EeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCc
Q 038818 235 CATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNP 314 (486)
Q Consensus 235 v~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~ 314 (486)
++++++|++|.++|+++|+++|++||+|+|||+||+++.+.++.++..+.+++++|++++|+|||+++|++||+++++++
T Consensus 264 v~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~ 343 (515)
T 2jis_A 264 SATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDT 343 (515)
T ss_dssp EEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCC
T ss_pred EEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeCh
Confidence 99999999999999999999999999999999999999988887777788888999999999999999999999999988
Q ss_pred -hHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCe
Q 038818 315 -NALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRF 393 (486)
Q Consensus 315 -~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~ 393 (486)
..+.+.+...++|+..........++++.++++++|++.++++|++++.+|.+|+++++++..++++++.+.|+++|++
T Consensus 344 ~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~ 423 (515)
T 2jis_A 344 SNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGF 423 (515)
T ss_dssp SCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTE
T ss_pred HHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 6666666667788865332222234566778899999999999999999999999999999999999999999999999
Q ss_pred EEecCCCeeEEEEEeecCCCCCC-CCCC-ccchHHHHHHHHHHHHhcCcEEEeeeeECC-EeEEEEEecCCCCcHHHHHH
Q 038818 394 EIVAPRNFAVVCFRVLPSASGLG-DGKA-NEGANELNRKLLESINASGQLYVSHGMVAG-IYFIRFAVGATLTEDRHVIA 470 (486)
Q Consensus 394 ~~~~~~~~~~v~f~~~~~~~~~~-~~~~-~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-~~~lR~~~~~~~tt~~did~ 470 (486)
+++.++..+.++|++.+...+.. +..+ ....++.+..+.+.+.++|.++++.+.+.+ ..++|++++++.+|++||++
T Consensus 424 ~~~~~~~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~ 503 (515)
T 2jis_A 424 ELVMEPEFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDF 503 (515)
T ss_dssp EESSCCSSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHH
T ss_pred EEeCCCCeeEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHH
Confidence 99988878889998864311000 0000 011122345677888889987777666555 57999999889999999999
Q ss_pred HHHHHHHHHHH
Q 038818 471 AWKVVQEKLDG 481 (486)
Q Consensus 471 ~i~~l~~~~~~ 481 (486)
+++.|++++++
T Consensus 504 ~~~~l~~~~~~ 514 (515)
T 2jis_A 504 LLNELERLGQD 514 (515)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhh
Confidence 99999988764
No 7
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.3e-61 Score=502.76 Aligned_cols=458 Identities=21% Similarity=0.373 Sum_probs=385.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHhhcCCC-CCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCccee
Q 038818 1 MDSEEFRRQGHMIIDFIADYYRDVEKYPVLSQVEPGYLRKRLPE-SAPYNPEPIETILQDVQQHIVPGITHWQSPYYFAY 79 (486)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~ 79 (486)
++.++|++.++++++.+.+|+++.+ +| .+..+|++++..++. .+|++|.+.+++++++.+.+.++..+|.||+|++|
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~ 106 (497)
T 2qma_A 29 LGSAEFASVMSHTTSAMKSVFEQVN-AP-YSGMDPKALEDAINAVDLDNKNAPLKSVIDDVAELVAKNAIFTQHPDCIAH 106 (497)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHCC-SS-SCCCCHHHHHHHHHTCCSSSCCCCHHHHHHHHHHHTTTTSCCTTSTTBCSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhcc-CC-CCCCCHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEe
Confidence 4778999999999999999999874 45 677889999998886 58999999999999999989999999999999999
Q ss_pred cCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHH
Q 038818 80 FPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARD 159 (486)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~ 159 (486)
+++++.+++++++++...+|.+...|..+|...++|+++++|+++++|+++. ..+++|+|||+||+.++.++|.
T Consensus 107 ~~~~~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~------~~~~~t~ggt~a~~~al~~ar~ 180 (497)
T 2qma_A 107 LHTPPLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLSEK------ADGIFTSGGTQSNQMGLMLARD 180 (497)
T ss_dssp SCCCCBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTT------CEEEEESSHHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCCCC------CCeEEcCCchHHHHHHHHHHHH
Confidence 9999999999999999889998889999999999999999999999999753 2799999999999999999987
Q ss_pred HHHHHc-c----ccCC----CCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCc
Q 038818 160 QILNEI-G----RENI----SRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLI 230 (486)
Q Consensus 160 ~~~~~~-~----~~~~----~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~ 230 (486)
++..+. + ..|. ++.+|+++..+|+|+.++++.+|+|.++++.||+++ +++||+++|+++|+++.++|.+
T Consensus 181 ~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~ 258 (497)
T 2qma_A 181 WIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANA--DGTMDITKLDEVIAQAKAEGLI 258 (497)
T ss_dssp HHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSSBCGGGHHHHHHHHHHTTCE
T ss_pred HHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecCC--CCcCCHHHHHHHHHHHHHCCCc
Confidence 654210 0 0121 244899999999999999999998766799999975 6799999999999988777777
Q ss_pred cEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEE
Q 038818 231 PLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLW 310 (486)
Q Consensus 231 p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~ 310 (486)
|++|+++.++|++|.++|+++|+++|++||+|+|||+||+++...++ ++..+.+++.+|++++|+|||+++|++||+++
T Consensus 259 ~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~~~D~i~~s~hK~l~~p~~~G~l~ 337 (497)
T 2qma_A 259 PFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVERAHSISVDFHKLFYQTISCGALL 337 (497)
T ss_dssp EEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGGGCSEEEEETTTTTCCCSSCEEEE
T ss_pred ceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCcccCCEEEEcchhccCCCcceEEEE
Confidence 88899999999999999999999999999999999999999887776 66667778899999999999999999999999
Q ss_pred eeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC
Q 038818 311 VKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGD 390 (486)
Q Consensus 311 ~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 390 (486)
++++..+. .+...+.|+..... ...++..++++++|++.++++|++++.+|.+++++++++..+++++|.+.|+++
T Consensus 338 ~~~~~~~~-~~~~~~~yl~~~~~---~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~ 413 (497)
T 2qma_A 338 VNDKSNFK-FLLHHADYLNREHD---ELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTN 413 (497)
T ss_dssp ESCGGGGG-GGCC-----------------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EeCHHHHH-HhcCCchhcCCccc---cCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99886543 44445667644211 124455678889999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHH
Q 038818 391 NRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIA 470 (486)
Q Consensus 391 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~ 470 (486)
++++++.++..++++|++.+.. ...+.+++++.+.+.++|+++.+++.+.+..++|++++++.++++||++
T Consensus 414 ~~~~~~~~~~~~~v~f~~~~~~---------~~~~~l~~~l~~~l~~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~ 484 (497)
T 2qma_A 414 DQFELLAEPSLSTVLFRATHET---------ADLDELNKALRLEALTRGIAVLGETIVDGKTALKFTILNPCLTTSDFES 484 (497)
T ss_dssp TTEEECSCCSSSEEEEEECCSS---------SCHHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHH
T ss_pred CCeEEEcCCCceEEEEEEcCCc---------cCHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHH
Confidence 9999988888899999987531 1234567788888999999877777788888999999889999999999
Q ss_pred HHHHHHHHHHHH
Q 038818 471 AWKVVQEKLDGI 482 (486)
Q Consensus 471 ~i~~l~~~~~~l 482 (486)
+++.|+++++++
T Consensus 485 ~~~~l~~~~~~~ 496 (497)
T 2qma_A 485 LLSKINMLAVEL 496 (497)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhh
Confidence 999999988764
No 8
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=100.00 E-value=1.2e-48 Score=400.71 Aligned_cols=411 Identities=15% Similarity=0.198 Sum_probs=316.4
Q ss_pred hhHHhhcCCCCCCCCCCCHHHHHHHHHhhh-cCCCcCCCCCCcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHH
Q 038818 35 PGYLRKRLPESAPYNPEPIETILQDVQQHI-VPGITHWQSPYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATE 113 (486)
Q Consensus 35 p~~~~~~~~~~~p~~~~~~~~il~~l~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~ 113 (486)
...++..++..+|++|.+.++|++++.+.+ .++...++||+|++. .+. ..+.+++..+++.+...|..+|...+
T Consensus 7 ~~~~~~~~~~~lp~~g~~~~~v~~~~~~~~~~~~~~~~~~~~f~~~---~~~--~~v~e~~~~a~~~~~~~~~~~~~~~~ 81 (452)
T 2dgk_A 7 KSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQT---WDD--ENVHKLMDLSINKNWIDKEEYPQSAA 81 (452)
T ss_dssp --------CCSCCCSCCCHHHHHHHHHHHGGGSCCCTTBCSCCSCC---CCC--HHHHHHHHHTTTCBTTCTTTCHHHHH
T ss_pred hHHhhhccCCCCCCCCCCHHHHHHHHHHHhcCCCCCccCCCCeeCC---Cch--HHHHHHHHHHhccCCCChhhChhHHH
Confidence 445566778899999999999999999988 577778889998862 122 35788999899888888889999999
Q ss_pred HHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCC--CCeEEEecCCCchHHHHHHHH
Q 038818 114 LENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENI--SRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 114 le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~--~~~~v~~s~~~H~s~~~a~~~ 191 (486)
+|+++++|+++++|++.+.. +...+++|+|||+||+.++.+++..+.++....|. +++.|+++. +|+++.++++.
T Consensus 82 l~~~~~~~la~l~g~~~~~~--~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~ 158 (452)
T 2dgk_A 82 IDLRCVNMVADLWHAPAPKN--GQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARY 158 (452)
T ss_dssp HHHHHHHHHHHHTTCCCCTT--SCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcccc--cCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHH
Confidence 99999999999999986410 00148999999999999999887644321111221 135788898 99999999999
Q ss_pred cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh------CceEEe
Q 038818 192 AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY------SIWVHV 265 (486)
Q Consensus 192 ~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~------g~~lhv 265 (486)
+|+ +++.||+++ ++|.+|+++|+++|+++ +.+|++++|+|++|.++|+++|+++|++| |+|+||
T Consensus 159 ~G~---~v~~v~~~~-~~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~v 228 (452)
T 2dgk_A 159 WDV---ELREIPMRP-GQLFMDPKRMIEACDEN------TIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHI 228 (452)
T ss_dssp TTC---EEEECCCBT-TBCSCCHHHHHHHCCTT------EEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEE
T ss_pred cCc---eEEEEecCC-CCCeECHHHHHHHHhhC------CEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEE
Confidence 999 999999985 35899999999999753 56899999999999999999999999996 999999
Q ss_pred eccccchhc--cCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCC
Q 038818 266 DAAYAGSAC--ICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKD 343 (486)
Q Consensus 266 D~a~g~~~~--~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 343 (486)
|+||+++.. ..+..+..+ .++++|++++++|||+++|.++|+++++++..+.+.+...+.|+... +..
T Consensus 229 D~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 298 (452)
T 2dgk_A 229 DAASGGFLAPFVAPDIVWDF-RLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQ---------IGT 298 (452)
T ss_dssp ECTTGGGTHHHHCTTCCCST-TSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECCTTCC---------EEE
T ss_pred EcccHHHHHHhhCccchhhc-CCCCCcEEEECcccccCCCCCeEEEEEcCHHHHHHHhccCccccCCC---------CCC
Confidence 999988754 233322222 25689999999999999999999999988754433444445565321 123
Q ss_pred ccccCCCCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC----CCeeEEEEEeecCCCCCCCC
Q 038818 344 WQITLSRRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP----RNFAVVCFRVLPSASGLGDG 418 (486)
Q Consensus 344 ~~~~~sr~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~----~~~~~v~f~~~~~~~~~~~~ 418 (486)
++++++|++ .++++|++++.+|.+++++++++..++++++.+.|+++++++++.+ +..++++|++.+...
T Consensus 299 ~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~~----- 373 (452)
T 2dgk_A 299 FAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGED----- 373 (452)
T ss_dssp CCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTCC-----
T ss_pred cccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCccc-----
Confidence 456778877 6789999999999999999999999999999999999988999865 577899999865210
Q ss_pred CCccchHHHHHHHHHHHHhcCcE---EEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 419 KANEGANELNRKLLESINASGQL---YVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 419 ~~~~~~~~~~~~l~~~l~~~g~~---~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
...+ ..++.++|.++|+. +..+..+.+..++|++++++. |++|+|++++.|+++++.+.+
T Consensus 374 ---~~~~--~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~-t~e~id~li~~l~~~~~~~~~ 436 (452)
T 2dgk_A 374 ---PGYT--LYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGF-EMDFAELLLEDYKASLKYLSD 436 (452)
T ss_dssp ---CSCC--HHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECCTTC-CHHHHHHHHHHHHHHHHHHHH
T ss_pred ---ccCC--HHHHHHHHHhcCCeeeeeeCCcccCCeEEEEEEecCCC-CHHHHHHHHHHHHHHHHHHHh
Confidence 0001 24677778788973 333334446779999997655 588999999999999877653
No 9
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=100.00 E-value=1.7e-45 Score=381.34 Aligned_cols=414 Identities=17% Similarity=0.230 Sum_probs=326.6
Q ss_pred CCCCCChhHHhhcCCC-CCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCc-ceecCCCCCHHHHHHHHHHhhcCCCccccc
Q 038818 29 VLSQVEPGYLRKRLPE-SAPYNPEPIETILQDVQQHIVPGITHWQSPYY-FAYFPSSGSIAGFLGEMLSSGFNVVGFNWM 106 (486)
Q Consensus 29 ~~~~~~p~~~~~~~~~-~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~ 106 (486)
..|...+.+++..++. .+|+.|.+.+++++.+.+.+.. ..+|++ ++.+.+ ..++..+.+++...++.+...|.
T Consensus 14 ~~~~~~~~~~~~~lp~~~~p~~~~~~~~~~~~~~~~i~l----~gnp~~~l~s~~t-~~~~~~v~~~l~~~~~~~~~~~~ 88 (502)
T 3hbx_A 14 VHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELML----DGNPRLNLASFVT-TWMEPECDKLIMSSINKNYVDMD 88 (502)
T ss_dssp CSCTTTSSGGGSCCCSSSCCSSCCCHHHHHHHHHHHGGG----SCCGGGBTTCCSC-CCCCHHHHHHHHHTTTCBTTCTT
T ss_pred ccccccchhhhhhccCCCCCCCCCCHHHHHHHHHHHhcc----CCCCCceeccccC-CCCCHHHHHHHHHHhccCCCChh
Confidence 3455678889988987 8999999999999999987642 246764 332222 22334578888888988888888
Q ss_pred cChhhHHHHHHHHHHHHHHcCCC--CCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccC--CCCeEEEecCCCc
Q 038818 107 SSPAATELENIVMDWLGEMLKLP--KSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGREN--ISRLVVYGSDQTH 182 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~--~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~--~~~~~v~~s~~~H 182 (486)
.+|...++|.++++|+++++|++ .+. ...|++|+|||+||+.++.+++..+.++.+.+| ..++.|+++..+|
T Consensus 89 ~~p~~~~le~~~~~~la~l~g~~~~~~~----~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h 164 (502)
T 3hbx_A 89 EYPVTTELQNRCVNMIAHLFNAPLEEAE----TAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQ 164 (502)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCCCCSSC----CCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCC
T ss_pred cChhHHHHHHHHHHHHHHHhCCCccccc----CCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCch
Confidence 99999999999999999999998 221 125778999999999999988776544322112 1345889999999
Q ss_pred hHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---
Q 038818 183 SALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY--- 259 (486)
Q Consensus 183 ~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~--- 259 (486)
+++.++++.+|+ +++.||+++ +++.+|+++|+++|+++ |.+|+++.++|++|.++|+++|+++|+++
T Consensus 165 ~s~~~~~~~~G~---~~~~v~~~~-~~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~ 234 (502)
T 3hbx_A 165 VCWEKFARYFEV---ELKEVKLSE-GYYVMDPQQAVDMVDEN------TICVAAILGSTLNGEFEDVKLLNDLLVEKNKE 234 (502)
T ss_dssp HHHHHHHHHTTC---EEEEECCBT-TBCSCCHHHHHHHCCTT------EEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCc---eeEEEecCC-CcCcCCHHHHHHHHhhC------CEEEEEecCCCCCCcccCHHHHHHHHHHhhhc
Confidence 999999999999 999999985 34899999999998764 56899999999999999999999999999
Q ss_pred ---CceEEeeccccchhc--cCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCC
Q 038818 260 ---SIWVHVDAAYAGSAC--ICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASD 334 (486)
Q Consensus 260 ---g~~lhvD~a~g~~~~--~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~ 334 (486)
|+|+|||+||+++.. ..+..+..+. +.++|++++++|||+++|.++|+++++++..+...+...+.|+....
T Consensus 235 ~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~-~~~~D~v~~s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~-- 311 (502)
T 3hbx_A 235 TGWDTPIHVDAASGGFIAPFLYPELEWDFR-LPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQ-- 311 (502)
T ss_dssp HCCCCCEEEECTTGGGTHHHHCTTCCCSTT-STTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECSSSSCE--
T ss_pred cCCCCeEEEECCccchhhhhhCcccccccC-CCCceEEEECcccccCCCCCeEEEEEeCHHHhhHHhccCcccccCCC--
Confidence 999999999987653 2444443332 56899999999999999999999999988765455555566765421
Q ss_pred CCCccCCCCccccCCCCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC-CCeeEEEEEeecCC
Q 038818 335 SKQVVDYKDWQITLSRRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP-RNFAVVCFRVLPSA 412 (486)
Q Consensus 335 ~~~~~~~~~~~~~~sr~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~ 412 (486)
..+++.++|+. .++++|++++.+|.+++.+++++..+++++|.+.|+++++++++.+ +..++++|++.+..
T Consensus 312 -------~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~ 384 (502)
T 3hbx_A 312 -------PTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSS 384 (502)
T ss_dssp -------EECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEESSCS
T ss_pred -------CCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEEEecCCC
Confidence 13456677775 6789999999999999999999999999999999999988999876 78899999997531
Q ss_pred CCCCCCCCccchHHHHHHHHHHHHhcCcEE---EeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 413 SGLGDGKANEGANELNRKLLESINASGQLY---VSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
.. + ...+.+.|.++|+++ ..+....+..++|++++ ..++++|+|.+++.|+++++.+.+
T Consensus 385 --------~~--~--~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~-~~~t~edid~li~~L~~~l~~l~~ 446 (502)
T 3hbx_A 385 --------CH--T--EFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIR-EDFSRTLAERLVIDIEKVMRELDE 446 (502)
T ss_dssp --------SC--C--HHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred --------cC--C--HHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeC-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 00 1 236778888889853 22223345679999996 577888999999999999887754
No 10
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-40 Score=346.09 Aligned_cols=393 Identities=15% Similarity=0.205 Sum_probs=304.6
Q ss_pred CCCCCCCCCCCHHHHHHHHHhhhcC-CCcCCCCCCcceecCCC-CCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHH
Q 038818 42 LPESAPYNPEPIETILQDVQQHIVP-GITHWQSPYYFAYFPSS-GSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVM 119 (486)
Q Consensus 42 ~~~~~p~~~~~~~~il~~l~~~~~~-~~~~~~~p~~~~~~~~~-~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~ 119 (486)
....+|++|.+.+++++++++.... +...|.+|+|+|+++.+ +.....+.+.+..+.+.+...|..+|...++|+++.
T Consensus 34 ~~~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 113 (497)
T 3mc6_A 34 NFPQLPSNGIPQDDVIEELNKLNDLIPHTQWKEGKVSGAVYHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVV 113 (497)
T ss_dssp CCSSCCSSCCCHHHHHHHHHHHHHSSCCCCGGGTCBSSSCSCCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHH
T ss_pred cccCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCCCEeeecCCCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHH
Confidence 3467899999999999999987653 56778899999987554 345556667777666667778888999999999999
Q ss_pred HHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCe
Q 038818 120 DWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNF 199 (486)
Q Consensus 120 ~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v 199 (486)
+|+++++|++.. ...+++++|||+|+..++.+++++..++. |.+++.|+++..+|+++.++++.+|+ ++
T Consensus 114 ~~la~~~g~~~~-----~~~~~~~~ggt~a~~~a~~a~~~~~~~~~---g~~~~~Vi~~~~~h~~~~~~~~~~G~---~~ 182 (497)
T 3mc6_A 114 SMVLRMFNAPSD-----TGCGTTTSGGTESLLLACLSAKMYALHHR---GITEPEIIAPVTAHAGFDKAAYYFGM---KL 182 (497)
T ss_dssp HHHHHHTTCCTT-----TCCEEEESSHHHHHHHHHHHHHHHHHHHS---CCSSCEEEEETTSCHHHHHHHHHSCC---EE
T ss_pred HHHHHHhCCCCC-----CCeEEEcCcHHHHHHHHHHHHHHHHHhcC---CCCCceEEEeCCccHHHHHHHHHcCC---eE
Confidence 999999999821 12789999999999999999987654332 23446899999999999999999999 99
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhcc----
Q 038818 200 RAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACI---- 275 (486)
Q Consensus 200 ~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~---- 275 (486)
+.||+++ +++.+|+++|+++|+++ +.+|+++.++|++|.++|+++|+++|++||+|+|||+||+++...
T Consensus 183 ~~v~~~~-~~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~ 255 (497)
T 3mc6_A 183 RHVELDP-TTYQVDLGKVKKFINKN------TVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEK 255 (497)
T ss_dssp EEECBCT-TTCSBCTTTTGGGCCSS------EEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTT
T ss_pred EEEecCc-ccCcCCHHHHHHHHhhC------CEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhh
Confidence 9999985 35799999999998653 568999999999999999999999999999999999999876543
Q ss_pred -----CccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCC
Q 038818 276 -----CPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSR 350 (486)
Q Consensus 276 -----~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr 350 (486)
.+.+.. ...++|++++++||++++|.++|+++++++......+...+.|... .+...++.++|
T Consensus 256 ~~~~~~~~~~~---~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~g~~ 323 (497)
T 3mc6_A 256 AGYKNLPLLDF---RVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTGG---------LYGSPTLAGSR 323 (497)
T ss_dssp TTCCSCCCCST---TSTTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTCTTS---------CBCCSSSCSSC
T ss_pred hcccCCccccc---cCCCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhcccccccCC---------CcCCcCcccCC
Confidence 111111 1347899999999999999999999999875532222222222211 11222333333
Q ss_pred CC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHH
Q 038818 351 RF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGG-DNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELN 428 (486)
Q Consensus 351 ~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~ 428 (486)
.. ..+++|++++.++.+++++++++..++++++++.|++ +|+++++.++..++++|...+. ..
T Consensus 324 ~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~~~~~---------------~~ 388 (497)
T 3mc6_A 324 PGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFSSKTL---------------NI 388 (497)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEECTTT---------------TH
T ss_pred cchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEeCCCC---------------CH
Confidence 32 2457899999999999999999999999999999999 6999998888888999975421 13
Q ss_pred HHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 429 RKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 429 ~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
.++.+.|.++|+.+ ... .....+|++++ .+++++++++++.|+++++++.+
T Consensus 389 ~~l~~~L~~~Gi~v-~~~--~~~~~~ri~~~--~~t~e~i~~~~~~L~~~l~~~~~ 439 (497)
T 3mc6_A 389 HELSDRLSKKGWHF-NAL--QKPVALHMAFT--RLSAHVVDEICDILRTTVQELKS 439 (497)
T ss_dssp HHHHHHHHTTTCBC-EEC--CSSCCEEEECC--TTTTCTHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCEEE-ecC--CCCCeEEEEEe--CCCHHHHHHHHHHHHHHHHHHHh
Confidence 46777888889743 222 12236899986 56777999999999999887653
No 11
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=100.00 E-value=3.6e-40 Score=343.20 Aligned_cols=393 Identities=18% Similarity=0.180 Sum_probs=308.3
Q ss_pred CCCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCcceecCCC-CCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHH
Q 038818 44 ESAPYNPEPIETILQDVQQHIVPGITHWQSPYYFAYFPSS-GSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWL 122 (486)
Q Consensus 44 ~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l 122 (486)
..+|++|.+.+++++++++.+.++...|.+++|+|++..+ +..+..+.+.+....+.+...|...|...++|.++++|+
T Consensus 69 ~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~l 148 (514)
T 3mad_A 69 ARLPRAGLPRAEILAEIAAMGAAESPAWRDGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMT 148 (514)
T ss_dssp SSCCSSCCCHHHHHHHHHHHHHHHHHHHHTTCBSSSCSCCCHHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHhccCCCCCCCceEEEecCCCCCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHH
Confidence 5689999999999999999888888889999999998653 556778888888888888888888999999999999999
Q ss_pred HHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEE
Q 038818 123 GEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAI 202 (486)
Q Consensus 123 ~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v 202 (486)
++++|++.+. ....+++|+|||+||..++.+++.+..++. |.+++.|+++..+|+++.++++.+|+ +++.|
T Consensus 149 a~~~g~~~~~---~~v~~~~t~ggt~a~~~al~a~~~~g~~~~---g~~~d~Vi~~~~~~~~~~~~~~~~G~---~v~~v 219 (514)
T 3mad_A 149 AHMLGGDAAG---GTVCGTVTSGGTESLLLAMKTYRDWARATK---GITAPEAVVPVSAHAAFDKAAQYFGI---KLVRT 219 (514)
T ss_dssp HHHTTGGGGT---SCCEEEEESSHHHHHHHHHHHHHHHHHHHH---CCSSCEEEEETTSCTHHHHHHHHHTC---EEEEE
T ss_pred HHHcCCCCcc---CCcceEEcCcHHHHHHHHHHHHHHHhhhhc---CCCCCeEEEeCccchHHHHHHHHcCC---eeEEe
Confidence 9999997310 001459999999999999999887643221 23457899999999999999999999 99999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhcc-------
Q 038818 203 KTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACI------- 275 (486)
Q Consensus 203 ~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~------- 275 (486)
|+++ ++++|+++|+++|+++ +.+|+++.++|++|.++|+++|+++|++||+|+|+|+||+++...
T Consensus 220 ~~~~--~~~~d~~~Le~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~ 291 (514)
T 3mad_A 220 PLDA--DYRADVAAMREAITPN------TVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGY 291 (514)
T ss_dssp CBCT--TSCBCHHHHHHHCCTT------EEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTC
T ss_pred eeCC--CCCCCHHHHHHHhccC------CEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCC
Confidence 9986 6799999999998753 568999999999999999999999999999999999999886542
Q ss_pred -CccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCC-
Q 038818 276 -CPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFR- 353 (486)
Q Consensus 276 -~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~- 353 (486)
.+.+.. ...++|++++++||++++|.++|+++++++......+.....|... .+..+++.+++...
T Consensus 292 ~~~~~~~---~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~gs~~~~~ 359 (514)
T 3mad_A 292 PVPPFDF---RLEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWPGG---------LYFSPTFAGSRPGAL 359 (514)
T ss_dssp CCCCCST---TSTTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEESSCTTC---------SEEESSSCSSCCHHH
T ss_pred CCCcccc---cCCCCcEEEECchhccCCCCCeEEEEEeCHHHhccccccccccCCC---------cccCCccCCCCchHH
Confidence 111111 2347899999999999999999999999876543211111111110 01122334454433
Q ss_pred chHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHH
Q 038818 354 ALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLE 433 (486)
Q Consensus 354 ~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~ 433 (486)
.+++|++++.++.+++++++++..++++++.+.|+++++++++.++ .+++.|..... + ..++.+
T Consensus 360 ~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~~~~~~~~~~~-------------~--~~~l~~ 423 (514)
T 3mad_A 360 SATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDP-LWVIAVASDEL-------------N--IYQVME 423 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCC-SSEEEEECSSS-------------C--HHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCC-eEEEEEeCCCC-------------C--HHHHHH
Confidence 4789999999999999999999999999999999999999988665 45666654321 1 246777
Q ss_pred HHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 434 SINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 434 ~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
.|.++|+.+ .+. .....+|++++++.+++++|+++++.|+++++++.+
T Consensus 424 ~L~~~Gi~v-~g~--~~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~ 471 (514)
T 3mad_A 424 EMAGRGWRL-NGL--HRPPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRA 471 (514)
T ss_dssp HHHTTTCBC-EEE--TTTTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCEe-ccC--CCCCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 888889754 322 223569999988888888999999999999887654
No 12
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=100.00 E-value=1.9e-37 Score=309.27 Aligned_cols=380 Identities=13% Similarity=0.061 Sum_probs=265.6
Q ss_pred CCCCCCCCCHHHHHHHHHhhhcCCCcCC-----------------CCCCcceecCCCCCHHHHHHHHHHhhcCCCccccc
Q 038818 44 ESAPYNPEPIETILQDVQQHIVPGITHW-----------------QSPYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWM 106 (486)
Q Consensus 44 ~~~p~~~~~~~~il~~l~~~~~~~~~~~-----------------~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~ 106 (486)
..+|++|.+.++|...|.++-.-...+| ..|+||||+++. +..+|++.. |. .|.
T Consensus 21 ~~~p~~g~~~~~i~~~l~~~~~~d~~~~~~~~~~geregrv~~~~~~~r~~g~~hg~----~~~~d~l~~----~~-~~~ 91 (450)
T 3bc8_A 21 GKCPEDGWDESTLELFLHELAVMDSNNFLGNCGVGEREGRVASALVARRHYRFIHGI----GRSGDISAV----QP-KAA 91 (450)
T ss_dssp CCCCSSCCCHHHHHHHHHHHHHTBGGGCTTCCCCSSCCCCCSCHHHHHHTTTCCSCB----CC-----------CC-SBH
T ss_pred ccCCccCCCHHHHHHHHHHHhhCCCCccccccccCcccceEecccccCCccceecch----hHHHHHHHh----Cc-ccc
Confidence 4689999999999998887543333333 236888998875 445577765 33 778
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCch-HHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHH
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTC-EAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSAL 185 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt-~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 185 (486)
.+|....+|+++..|+.+++|+|..+ .+++++|+| +++.+++.++|... .++..|+++..+|.|+
T Consensus 92 ~~~~~~~~e~~~~~~~~~~lGlp~~~------~~~lV~GaT~~~~a~~L~aar~~~--------~~~~~viv~r~aHkSv 157 (450)
T 3bc8_A 92 GSSLLNKITNSLVLNVIKLAGVHSVA------SCFVVPMATGMSLTLCFLTLRHKR--------PKAKYIIWPRIDQKSC 157 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTCC------EEEEESSCHHHHHHHHHHHHHHHC--------TTCCEEEEECCCCHHH
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCc------eEEEECCHHHHHHHHHHHHcchhh--------cCCCEEEEECCcHHHH
Confidence 89999999999999999999999874 678999998 77887788887631 0235567778899999
Q ss_pred HHHHHHcCCCCCCeEEEecCC-CCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEE
Q 038818 186 QKAAQIAGIDPKNFRAIKTTK-SSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVH 264 (486)
Q Consensus 186 ~~a~~~~G~g~~~v~~v~~d~-~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lh 264 (486)
.+++.++|+ ..+.|+... ++.+.||+++|+++|+++.. ..+.+|+.+.+++.+|.+|||++|+++|++||+|+|
T Consensus 158 ~kAl~l~Gl---~p~~v~~~~~~~~~~id~~~le~aI~~~~~--~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~ 232 (450)
T 3bc8_A 158 FKSMVTAGF---EPVVIENVLEGDELRTDLKAVEAKIQELGP--EHILCLHSTTACFAPRVPDRLEELAVICANYDIPHV 232 (450)
T ss_dssp HHHHHHTTC---EEEEECCEEETTEEECCHHHHHHHHHHHCG--GGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEE
T ss_pred HHHHHHcCC---eeEEEEeeecCccCCcCHHHHHHHHHhcCC--CCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEE
Confidence 999999999 766665421 13689999999999988642 246677777777777899999999999999999999
Q ss_pred eeccccchhccCccch-hhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCC
Q 038818 265 VDAAYAGSACICPEFR-HFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKD 343 (486)
Q Consensus 265 vD~a~g~~~~~~~~~~-~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 343 (486)
||+|||+.+.+..+.. ..+.. ++||+++.|+|||+.+|.++++++++++..+.+... .|...
T Consensus 233 VD~A~G~~~~~~~~l~~~a~~~-~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~~~---~~~g~------------- 295 (450)
T 3bc8_A 233 VNNAYGLQSSKCMHLIQQGARV-GRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISK---MYPGR------------- 295 (450)
T ss_dssp EECTTTTTCHHHHHHHHHHHHH-SCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHHH---HSCSC-------------
T ss_pred EECCCchhhhhhHhHHHHHhcc-cCCCEEEECCccCCCchhccEEEEecCHHHHHHHHH---HhhcC-------------
Confidence 9999998655433221 11111 589999999999999999999999998877654321 23211
Q ss_pred ccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC---CeEEecCCCee-EEEEEeecCCCCCCCCC
Q 038818 344 WQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDN---RFEIVAPRNFA-VVCFRVLPSASGLGDGK 419 (486)
Q Consensus 344 ~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~-~v~f~~~~~~~~~~~~~ 419 (486)
+.+ ..++.+|.++..+|.+++++.+++..++++++++.|++++ +++++..+..+ ..++.+.....
T Consensus 296 ---~s~--SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~------ 364 (450)
T 3bc8_A 296 ---ASA--SPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDG------ 364 (450)
T ss_dssp ---BCS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSS------
T ss_pred ---Ccc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeecccccc------
Confidence 000 1248999999999999999999999999999999999888 88887654322 22232221100
Q ss_pred CccchHHHHHHHHHHHHh---cCcEEEee--------ee---------ECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 420 ANEGANELNRKLLESINA---SGQLYVSH--------GM---------VAGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 420 ~~~~~~~~~~~l~~~l~~---~g~~~~~~--------~~---------~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
..+.+ ..+|.-.+.. +|.-...+ .. ..+..++=+.+ ++..+++|+++++++|+++.
T Consensus 365 -~~~~D--~tkl~i~~~~~g~sG~~v~~~~~~~~~~~~~l~~~gi~~E~~~~~~i~~~~-sig~~~~di~~l~~~L~~~~ 440 (450)
T 3bc8_A 365 -HHDKA--VTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAA-AIGMKMQDVDLFIKRLDKCL 440 (450)
T ss_dssp -SSSCH--HHHHHHHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEEC-CTTCCHHHHHHHHHHHHHHH
T ss_pred -cccCC--CceeEEEecCCCCccceeeecccccchhHHHHHHcCCeeecCCCCcEEEEe-cCCCCHHHHHHHHHHHHHHH
Confidence 00011 1233333333 33322210 00 11233444444 67889999999999999987
Q ss_pred HHHh
Q 038818 480 DGIL 483 (486)
Q Consensus 480 ~~l~ 483 (486)
++..
T Consensus 441 ~~~~ 444 (450)
T 3bc8_A 441 NIVR 444 (450)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
No 13
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.1e-35 Score=298.59 Aligned_cols=381 Identities=16% Similarity=0.157 Sum_probs=288.7
Q ss_pred CCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHH
Q 038818 45 SAPYNPEPIETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGE 124 (486)
Q Consensus 45 ~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~ 124 (486)
.+|+.|.+.+++++.+.+.. +....+.+|.|+|+..+++.+ . +.+.+...+..+...+...+...+++.++++++++
T Consensus 4 ~lp~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~-~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~ 80 (397)
T 3f9t_A 4 NMQEKGVSEKEILEELKKYR-SLDLKYEDGNIFGSMCSNVLP-I-TRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGS 80 (397)
T ss_dssp SCCSSCCCHHHHHHHHHHHH-TTSCCGGGTCBCSCSCCCCCT-H-HHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHhh-ccCCCCCCCCeEEEecCCCcH-H-HHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHH
Confidence 57999999999999999854 556677889999998765443 3 45566666655444445556778999999999999
Q ss_pred HcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHH--ccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEE
Q 038818 125 MLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNE--IGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAI 202 (486)
Q Consensus 125 l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~--~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v 202 (486)
++|.+.. .+++|+|||+|+..++.+++..+... .+....+++.|+++..+|+++.++++.+|+ +++.+
T Consensus 81 ~~~~~~~-------~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v 150 (397)
T 3f9t_A 81 LLNNKDA-------YGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDL---EYIYA 150 (397)
T ss_dssp HTTCTTC-------EEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTC---EEEEE
T ss_pred HhCCCCC-------CEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCc---eeEEE
Confidence 9999765 68999999999999999887653211 111122477899999999999999999999 99999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccc---
Q 038818 203 KTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEF--- 279 (486)
Q Consensus 203 ~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~--- 279 (486)
|+++ ++.+|+++|++++++. .+.+|+++.++|++|.+.|+++|.++|++||+|+|+|++|+++.......
T Consensus 151 ~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~ 223 (397)
T 3f9t_A 151 PIKE--DYTIDEKFVKDAVEDY-----DVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYK 223 (397)
T ss_dssp CBCT--TSSBCHHHHHHHHHHS-----CCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGC
T ss_pred eeCC--CCcCCHHHHHHHHhhc-----CCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccc
Confidence 9985 5799999999999872 13478889999999999999999999999999999999998765422110
Q ss_pred ------hhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC-C
Q 038818 280 ------RHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR-F 352 (486)
Q Consensus 280 ------~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~-~ 352 (486)
...+. . ++|++++++||++++|.++|+++++++.... .+....+|+.... .....+++. .
T Consensus 224 ~~~~~~~~~~~-~-~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~----------~~~~~~~~~~~ 290 (397)
T 3f9t_A 224 KKGVNYKFDFS-L-GVDSITIDPHKMGHCPIPSGGILFKDIGYKR-YLDVDAPYLTETR----------QATILGTRVGF 290 (397)
T ss_dssp CTTCCCCCSGG-G-TCSEEECCTTTTTCCCSSCEEEEESSGGGGG-GTCEECTTSSSSE----------ECSSCSSCCSH
T ss_pred ccccccccccc-c-cCCeEEEccccccCCCCCceEEEEeCHHHHH-hhccCCccccCCC----------ccccccccccc
Confidence 00111 2 6899999999999999999999998876532 2322233433211 112223333 2
Q ss_pred CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHH
Q 038818 353 RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLL 432 (486)
Q Consensus 353 ~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~ 432 (486)
..++++++++.++.+++.++.++..++++++.+.|+++ +++++.++..++++|.... ...+.
T Consensus 291 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~-----------------~~~~~ 352 (397)
T 3f9t_A 291 GGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKEN-NFKPVIEPILNIVAIEDED-----------------YKEVC 352 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCCSSSEEEEECTT-----------------HHHHH
T ss_pred hHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEcCCCccEEEEEeCC-----------------HHHHH
Confidence 45788888888888999999999999999999999998 8887777788888877642 24567
Q ss_pred HHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 433 ESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 433 ~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
+.+.++|+. +.+.. ...++|+++. ..++++|++++++.|+++++
T Consensus 353 ~~l~~~gi~-v~~~~--~~~~~Ri~~~-~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 353 KKLRDRGIY-VSVCN--CVKALRIVVM-PHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp HHHHHTTCB-CEECS--SSSEEEEECC-TTCCHHHHHHHHHHHHHHC-
T ss_pred HHHHhCCeE-EeccC--CCCEEEEEEc-CCCCHHHHHHHHHHHHHhhC
Confidence 777778874 33321 2468999985 67788899999999998754
No 14
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=100.00 E-value=2.2e-36 Score=309.73 Aligned_cols=394 Identities=13% Similarity=0.109 Sum_probs=273.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHhhcCCCCCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCcceecCC
Q 038818 3 SEEFRRQGHMIIDFIADYYRDVEKYPVLSQVEPGYLRKRLPESAPYNPEPIETILQDVQQHIVPGITHWQSPYYFAYFPS 82 (486)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~ 82 (486)
++.+.+++.+.++...++++++-. ...+|++|.+.+++.+.+.+..... ...|+++...
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~lp~~g~~~~~i~~~~~~~~~~~-----~~~yld~aa~ 89 (456)
T 2z67_A 31 PKNMEKRGELVLNEYLKEIEDVFN----------------HRKIPENGIDDEKIKLFLKFLSMMD-----TDKDPKSVRI 89 (456)
T ss_dssp CHHHHHHHHHHHHHHTHHHHHHHH----------------HCSCCSSCCCHHHHHHHHHHHHTTB-----GGGCTTCEEC
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhc----------------cCCCCCCCCCHHHHHHHHHHHHhcc-----cccccccccc
Confidence 356677777777766666655321 1346888899999888777654322 1235554443
Q ss_pred CCCHHHHHHHHHH----hhcCC----------CccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCch-
Q 038818 83 SGSIAGFLGEMLS----SGFNV----------VGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTC- 147 (486)
Q Consensus 83 ~~~~~~~~~~~l~----~~~n~----------~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt- 147 (486)
++.+..++..+.. .+++. +. .|..+|.+.++++++++|+++++|++. .+++|+|||
T Consensus 90 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~g~~~--------~~~~t~g~te 160 (456)
T 2z67_A 90 GEREARTYSKIHEELSSGFCHGIGRSGNLVDPQP-KASGASIMYALTNKILESFFKQLGLNV--------HAIATPISTG 160 (456)
T ss_dssp SSCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCT-TBHHHHHHHHHHHHHHHHHHHHTTCCC--------EEEEESSCHH
T ss_pred ccccccccccccCccccccCCCccHHHHHHhhCc-ccccCcHHHHHHHHHHHHHHHHcCCCC--------CEEEeCcHHH
Confidence 3333322222111 11121 21 445566788999999999999999874 279999999
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCC-CCCcccCHHHHHHHHHHHHH
Q 038818 148 EAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTK-SSSFTLTPESLQAAIDLDIQ 226 (486)
Q Consensus 148 ~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~-~~~~~~d~~~L~~~l~~~~~ 226 (486)
++|+.++.+++... ++..|+++..+|+|+.++++..|+ +++.++..+ +++|.+|+++|+++|+....
T Consensus 161 ~a~~~al~~~~~~~---------~~~~vi~~~~~h~s~~~~~~~~G~---~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~ 228 (456)
T 2z67_A 161 MSISLCLSAARKKY---------GSNVVIYPYASHKSPIKAVSFVGM---NMRLVETVLDGDRVYVPVEDIENAIKKEIE 228 (456)
T ss_dssp HHHHHHHHHHHHHH---------CCCEEEEECCCCHHHHHHHHHTTC---EEEEECCEEETTEEECCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc---------CCCEEEEECCCcHHHHHHHHHcCC---CceEEEEeccCCCCCcCHHHHHHHHHHHhh
Confidence 67777777765531 345566677799999999999999 898888731 23689999999999943322
Q ss_pred CCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhc-cCccchhhhcCCCCCCceeeccccccCCCCc
Q 038818 227 AGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSAC-ICPEFRHFIDGIEGADSFSLNAHKWFFTTLD 305 (486)
Q Consensus 227 ~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~-~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~ 305 (486)
++ .+++|+.+.++|++|.++|+++|+++|+++|+|+|||+||++... ..+.....+.+ ++|++++++|||+++|.+
T Consensus 229 ~~-~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~--~~D~~~~s~hK~~~~p~g 305 (456)
T 2z67_A 229 LG-NRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY--RVDAVVSSSDKNLLTPIG 305 (456)
T ss_dssp TT-CCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS--CCSEEEEEHHHHHCCCSS
T ss_pred CC-CeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCC--CCCEEEEcCCCCcCCCCC
Confidence 22 366788899999999999999999999999999999999986544 22322222333 799999999999999999
Q ss_pred ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Q 038818 306 CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQE 385 (486)
Q Consensus 306 ~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~ 385 (486)
+|+++++++..+... .+.|..... ...++++|.++..++.++++++.++..++++++.+
T Consensus 306 ~G~l~~~~~~~~~~l---~~~~~g~~~------------------~~~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~ 364 (456)
T 2z67_A 306 GGLVYSTDAEFIKEI---SLSYPGRAS------------------ATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDE 364 (456)
T ss_dssp CEEEEESCHHHHHHH---HTTSCSCBC------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcCHHHHhhc---CcCCCCCCC------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999877654432 222321100 01267889999999999999999999999999999
Q ss_pred HHhCCC---CeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcE--EEe-------ee--eECCE
Q 038818 386 LVGGDN---RFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQL--YVS-------HG--MVAGI 451 (486)
Q Consensus 386 ~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~--~~~-------~~--~~~~~ 451 (486)
.|++++ ++.+.. +. ++++|.+.... . ...+.++|.++|+. -+. +. .....
T Consensus 365 ~L~~~~~~~g~~v~~-~~-~~v~~~~~~~~------------~--~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~ 428 (456)
T 2z67_A 365 LLNDLSKKTGGKFLD-VE-SPIASCISVNS------------D--PVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTH 428 (456)
T ss_dssp HHHHHHHHSSCCBCC-CC-CSSEEEEECSS------------C--HHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSC
T ss_pred HHHhcccccCCEecC-CC-CeEEEEEeccc------------H--HHHHHHHHHHcCCCcceEEeecCccccccccccCc
Confidence 999885 766654 44 88888874221 0 23456666666641 121 00 01124
Q ss_pred eEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 452 YFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 452 ~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
+++|+++ ...+|++|||+++++|++++
T Consensus 429 ~~vr~s~-~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 429 DYIVMNA-AIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp CEEEEEC-CTTCCHHHHHHHHHHHHTC-
T ss_pred chhhhhh-hcCCCHHHHHHHHHHHHHHh
Confidence 6899998 46788999999999998753
No 15
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=100.00 E-value=2.8e-31 Score=273.21 Aligned_cols=395 Identities=13% Similarity=0.068 Sum_probs=265.4
Q ss_pred hhHHhhcCCCCCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHHHHHHhhcCCCccccc-cChhhHH
Q 038818 35 PGYLRKRLPESAPYNPEPIETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWM-SSPAATE 113 (486)
Q Consensus 35 p~~~~~~~~~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~-~~~~~~~ 113 (486)
|+.++...+..+| +.+..++++.+.++...+...+.+..|+| -..+...|.++.++...+.+-+..... .++...+
T Consensus 31 p~~~~~~~~~~lp--~~~e~~~~~~~~~l~~~~~~~~~~~~~lg-~~~~~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~ 107 (474)
T 1wyu_B 31 PKEHLREVPPRLP--EVDELTLVRHYTGLSRRQVGVDTTFYPLG-SCTMKYNPKLHEEAARLFADLHPYQDPRTAQGALR 107 (474)
T ss_dssp CGGGBCSSCCCCC--CCCHHHHHHHHHHHHTTCCCTTTSCCCBT-TTCCCCCCHHHHHHHHTTSSCCTTSCGGGCHHHHH
T ss_pred CHHHhccCCCCCC--CCCHHHHHHHHHHHHhCCCCcccCccccc-cccccCCHHHHHHHHHHHHhcCCCCchhhChHHHH
Confidence 5666665567788 78999999999987766655555667777 333334455555555442221211222 4778889
Q ss_pred HHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcC
Q 038818 114 LENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAG 193 (486)
Q Consensus 114 le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G 193 (486)
++.++.+|+++++|++. ..++++|||+|+..|+.+++.....+ |.. .++..|+++..+|.+..++++..|
T Consensus 108 l~~~l~~~la~~~g~~~--------~~~~~~ggt~a~~~al~~~~~~~~~~-Gd~-~~r~~Vlv~~~~h~~~~~~~~~~G 177 (474)
T 1wyu_B 108 LMWELGEYLKALTGMDA--------ITLEPAAGAHGELTGILIIRAYHEDR-GEG-RTRRVVLVPDSAHGSNPATASMAG 177 (474)
T ss_dssp HHHHHHHHHHHHHTCSE--------EECCCSSHHHHHHHHHHHHHHHHHHT-TCT-TTCCEEEEETTSCTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHCCCc--------eeecChHHHHHHHHHHHHHHHHHHhc-CCc-cCCCEEEEeCCcChhhHHHHHHCC
Confidence 99999999999999874 35788999999999888887643221 110 134478889999999999999999
Q ss_pred CCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc-CCchHHHHHHHHhCceEEeeccccch
Q 038818 194 IDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV-DPLGPLCDIAKRYSIWVHVDAAYAGS 272 (486)
Q Consensus 194 ~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i-dpl~~I~~i~~~~g~~lhvD~a~g~~ 272 (486)
+ +++.||+++ +|.+|+++|+++|+++ +.+|+++.+ |++|.+ +|+++|+++|++||+|+|+|++|+.+
T Consensus 178 ~---~vv~v~~~~--~~~~d~~~L~~~i~~~------t~~v~~~~p-n~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~ 245 (474)
T 1wyu_B 178 Y---QVREIPSGP--EGEVDLEALKRELGPH------VAALMLTNP-NTLGLFERRILEISRLCKEAGVQLYYDGANLNA 245 (474)
T ss_dssp C---EEEEECBCT--TSSBCHHHHHHHCSTT------EEEEEECSS-CTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGG
T ss_pred C---EEEEecCCC--CCCcCHHHHHHhhCCC------ceEEEEECC-CCCcccCCCHHHHHHHHHHcCCEEEEeCchhhh
Confidence 9 999999975 5799999999998654 346777776 579999 89999999999999999999999765
Q ss_pred hccCccchhhhcCCCCCCceeeccccccCCCC-----cceEEEeeCchHHHHHhcCCcccccCccCCC----CCccCCCC
Q 038818 273 ACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-----DCCCLWVKNPNALIKALSTNPEFLRNKASDS----KQVVDYKD 343 (486)
Q Consensus 273 ~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-----~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~----~~~~~~~~ 343 (486)
....-.... .++|++++++||++++|. ++|+++++++.. +.+. ..++....... ........
T Consensus 246 ~~g~~~~~~-----~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~--~~l~--~~~~~~~g~~~~~~~~~~~~~~~ 316 (474)
T 1wyu_B 246 IMGWARPGD-----MGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLA--PYLP--VPLVERGEEGFYLDFDRPKSIGR 316 (474)
T ss_dssp TTTTCCHHH-----HTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGG--GGCC--SCEEEECSSCEEEECCCTTCCCC
T ss_pred hccCCCccc-----CCCcEEEEeCccccccCCCCCCCCeEEEEEcHHHH--HhCC--CCeeeccCCeeEecccCcccCcc
Confidence 431101111 168999999999999986 689999987522 1221 11111000000 00000000
Q ss_pred ccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC-CeeEEEEEeecCCCCCCCCCCcc
Q 038818 344 WQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR-NFAVVCFRVLPSASGLGDGKANE 422 (486)
Q Consensus 344 ~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~~~v~f~~~~~~~~~~~~~~~~ 422 (486)
....++......++|..++.+|.++++++.++..++++++.+.|+++ ++++..++ .++.+.+.+ +..
T Consensus 317 ~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~-~~~---------- 384 (474)
T 1wyu_B 317 VRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEK-GYRVPYDGPSMHEFVAQP-PEG---------- 384 (474)
T ss_dssp SSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCSSCSSCCSCEEEBC-STT----------
T ss_pred cccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcEecCCCCcceEEEEEc-CCC----------
Confidence 00001111223556777777888999999999999999999999987 88774332 232233333 211
Q ss_pred chHHHHHHHHHHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 423 GANELNRKLLESINASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 423 ~~~~~~~~l~~~l~~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
.....+.++|.++|+.. ....+. ...++|++++ ..+++++++++++.|+++++
T Consensus 385 ---~~~~~l~~~L~~~Gi~~-~~~~~~~~~~~~lRis~~-~~~t~e~id~~~~~L~~~~~ 439 (474)
T 1wyu_B 385 ---FRALDLAKGLLELGFHP-PTVYFPLIVKEALMVEPT-ETEAKETLEAFAEAMGALLK 439 (474)
T ss_dssp ---CCHHHHHHHHHHTTCCC-CEESCSTTSTTCEEECCC-TTSCHHHHHHHHHHHHHHHT
T ss_pred ---CCHHHHHHHHHHCCccc-cccccccccCCEEEEEee-cCCCHHHHHHHHHHHHHHHH
Confidence 01345677777778752 221111 2468999985 46678899999999998764
No 16
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.97 E-value=2.5e-29 Score=253.73 Aligned_cols=358 Identities=15% Similarity=0.064 Sum_probs=247.5
Q ss_pred CCCCCcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHH
Q 038818 71 WQSPYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAI 150 (486)
Q Consensus 71 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~ 150 (486)
..+|.++-+.|++...+..+.+.+.... .. ..++....+..++++++++++|.+... ..++++|||+|+
T Consensus 9 ~~~~~~~~~~pgp~~~~~~v~~a~~~~~---~~--~~~~~~~~~~~~~~~~la~~~~~~~~~------~v~~~~sgt~al 77 (411)
T 3nnk_A 9 LNPPSRLLMGPGPINADPRVLRAMSSQL---IG--QYDPAMTHYMNEVMALYRGVFRTENRW------TMLVDGTSRAGI 77 (411)
T ss_dssp CCCCCCEEESSSCCCCCHHHHHHHTSCC---CC--TTCHHHHHHHHHHHHHHHHHHTCCCSE------EEEEESCHHHHH
T ss_pred cCCccceeecCCCCCCCHHHHHHhhccc---cc--cccHHHHHHHHHHHHHHHHHhCCCCCc------EEEECCCcHHHH
Confidence 3577788888887766666665555432 11 124556678888999999999998652 378888999999
Q ss_pred HHHHHHHHHHHHHHccccCCCCeEEEecCCCchH--HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCC
Q 038818 151 LCTLAAARDQILNEIGRENISRLVVYGSDQTHSA--LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAG 228 (486)
Q Consensus 151 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g 228 (486)
..++.+... +++.|+++..+|++ +...++..|+ +++.+|++. ++.+|+++|+++|++..
T Consensus 78 ~~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~--- 138 (411)
T 3nnk_A 78 EAILVSAIR-----------PGDKVLVPVFGRFGHLLCEIARRCRA---EVHTIEVPW--GEVFTPDQVEDAVKRIR--- 138 (411)
T ss_dssp HHHHHHHCC-----------TTCEEEEEECSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCHHHHHHHHHHHC---
T ss_pred HHHHHHhcC-----------CCCEEEEecCCchHHHHHHHHHHcCC---eEEEEecCC--CCCCCHHHHHHHHhhCC---
Confidence 888777632 67788888899988 8888999999 999999975 56899999999998631
Q ss_pred CccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceE
Q 038818 229 LIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCC 308 (486)
Q Consensus 229 ~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~ 308 (486)
+.+|++++++|++|.+.|+++|+++|++||+|+|+|++++.+....+. .. .++|++++++||++++|.++|+
T Consensus 139 --~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~-~~-----~~~d~~~~s~~K~l~~~~g~g~ 210 (411)
T 3nnk_A 139 --PRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLET-DV-----WGLDAVSAGMQKCLGGPSGTSP 210 (411)
T ss_dssp --CSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCT-TT-----TTCSEEECCSTTTTCCCSSEEE
T ss_pred --CeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCcccch-hc-----cCCcEEEecCccccCCCCceEE
Confidence 447889999999999999999999999999999999998765443221 11 1689999999999999999999
Q ss_pred EEeeCchHHHHHhcC---CcccccCccCC---CCCccCCCC----------cccc-CCCC-CCchHHHHHHHHhchHHHH
Q 038818 309 LWVKNPNALIKALST---NPEFLRNKASD---SKQVVDYKD----------WQIT-LSRR-FRALKLWLVLRSFGVANLR 370 (486)
Q Consensus 309 ~~~~~~~~~~~~~~~---~~~y~~~~~~~---~~~~~~~~~----------~~~~-~sr~-~~~l~~~~~l~~~g~~g~~ 370 (486)
++++++.. ...... .+.|....... ......+.+ .... .+.. ....++..++..+..+|++
T Consensus 211 ~~~~~~~~-~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~ 289 (411)
T 3nnk_A 211 ITLSARME-EAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLD 289 (411)
T ss_dssp EEECHHHH-HHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHH
T ss_pred EEECHHHH-HHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHH
Confidence 99876532 222111 12222111000 000000000 0001 1111 1123445556656666788
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEecCCC---eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhc-CcEEEeee
Q 038818 371 NFLRSHVRMAQLFQELVGGDNRFEIVAPRN---FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINAS-GQLYVSHG 446 (486)
Q Consensus 371 ~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~ 446 (486)
++.++..++++++.+.|+++ ++++..++. ..+++|.+.... + ..++.+.|.++ |+.+..+.
T Consensus 290 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~------------~--~~~l~~~l~~~~gi~v~~g~ 354 (411)
T 3nnk_A 290 YGIARHKLHGDALVKGIQAM-GLETFGDLKHKMNNVLGVVIPQGI------------N--GDQARKLMLEDFGIEIGTSF 354 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCSSEEEEECCTTC------------C--HHHHHHHHHHHHSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCEeCCCcccccccEEEEECCCCC------------C--HHHHHHHHHHhcCeEEeCcc
Confidence 99999999999999999987 788765432 456777764211 0 23566666665 87543332
Q ss_pred eECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 447 MVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 447 ~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
...+..++|++++.+.++++||+++++.|+++++++
T Consensus 355 ~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~ 390 (411)
T 3nnk_A 355 GPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYL 390 (411)
T ss_dssp GGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHc
Confidence 222346899998667778999999999999998764
No 17
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.97 E-value=9e-29 Score=252.08 Aligned_cols=378 Identities=14% Similarity=0.110 Sum_probs=242.2
Q ss_pred ChhHHhhcCCCCCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHHHHH--HhhcCCC-ccccccChh
Q 038818 34 EPGYLRKRLPESAPYNPEPIETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGEML--SSGFNVV-GFNWMSSPA 110 (486)
Q Consensus 34 ~p~~~~~~~~~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l--~~~~n~~-~~~~~~~~~ 110 (486)
-|+.++.. +..+| +|.++.++++++.....++.. ..-.|++.-..+...|..+.+++ ...+... ....+.++.
T Consensus 30 ~p~~~~~~-~~~lp-~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~g~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~g 105 (438)
T 1wyu_A 30 LPKEILSP-PIDLP-EPLPEWKVLEELRRLAAQNLP--AHKAFLGGGVRSHHVPPVVQALAARGEFLTAYTPYQPEVSQG 105 (438)
T ss_dssp SCGGGSSC-CCCCC-CCCCHHHHHHHHHHHHHTSCC--CTTCCCCSSCCCCCCCHHHHHHHTSHHHHHCCSCCSGGGCHH
T ss_pred CcHHHhcC-CCCCC-CCCCHHHHHHHHHHHHhcCcC--ccccccCCCccCCcCcHHHHHHHhcchhhhcCCCCcchhhhh
Confidence 36778777 88899 889999999999876554422 01112222111122334444443 2222211 111135677
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHH-
Q 038818 111 ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAA- 189 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~- 189 (486)
..+++.++++++++++|++.. ++++++|||.++..++.+.+.. +++.|+++..+|++...++
T Consensus 106 ~~~~~~~~~~~la~~~g~~~~-------~i~~~~g~taa~ea~~~a~~~~----------~gd~Viv~~~~h~s~~~~~~ 168 (438)
T 1wyu_A 106 VLQATFEYQTMIAELAGLEIA-------NASMYDGATALAEGVLLALRET----------GRMGVLVSQGVHPEYRAVLR 168 (438)
T ss_dssp HHHHHHHHHHHHHHHHTSSEE-------CSCBSSHHHHHHHHHHHHHHHH----------TCCEEEEETTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCcc-------ceEEeCcHHHHHHHHHHHHhcC----------CCCEEEEcCccCHhHHHHHH
Confidence 788999999999999999754 5789999984443333332221 5678889999999977554
Q ss_pred ---HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEee
Q 038818 190 ---QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVD 266 (486)
Q Consensus 190 ---~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD 266 (486)
+..|+ +++.+|++ ++.+|+++ |++ .+.+|+++++ |++|.++|+++|+++|+++|+|+|+|
T Consensus 169 ~~a~~~G~---~v~~v~~~---~~~~d~~~----i~~------~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd 231 (438)
T 1wyu_A 169 AYLEAVGA---KLLTLPLE---GGRTPLPE----VGE------EVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAV 231 (438)
T ss_dssp HHHHHTTC---EEEEECCB---TTBCCCCC----CCT------TEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHCCC---EEEEEcCc---CCccCHHH----hCC------CeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEE
Confidence 45798 99999873 45888776 332 2567888888 99999999999999999999999966
Q ss_pred cc-ccchhccCccchhhhcCCCCCCceeecccc-----ccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccC
Q 038818 267 AA-YAGSACICPEFRHFIDGIEGADSFSLNAHK-----WFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVD 340 (486)
Q Consensus 267 ~a-~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK-----~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 340 (486)
+. ++.+.+..+ .. .++|++++++|| |+++| ++|+++++++ ... . .+.++.+...+..+...
T Consensus 232 ~d~~a~g~~~~~--~~-----~g~D~~~~s~kk~~~~~~~~Gp-~~G~l~~~~~-~~~-~---l~~~~~g~~~~~~~~~~ 298 (438)
T 1wyu_A 232 ADPLSLGVLKPP--GA-----YGADIAVGDGQSLGLPMGFGGP-HFGFLATKKA-FVR-Q---LPGRLVSETVDVEGRRG 298 (438)
T ss_dssp CCTTGGGTBCCH--HH-----HTCSEEEEECTTTTCCCGGGCS-CCEEEEECGG-GGG-G---CCSCCEEEEEBTTSCEE
T ss_pred echhhccCcCCC--cc-----CCCCEEEECCcccCCCccCCCC-CeeEEEEcHH-HHH-h---CCCceeccccccCCCcc
Confidence 44 322222222 11 268999999888 67788 8999998765 221 1 12222111000000000
Q ss_pred CC------Cc--cc-cCCCCC---Cc-hHH--HHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC-CCeeEE
Q 038818 341 YK------DW--QI-TLSRRF---RA-LKL--WLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP-RNFAVV 404 (486)
Q Consensus 341 ~~------~~--~~-~~sr~~---~~-l~~--~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v 404 (486)
+. .. .. ..+... .. .++ +..+..++.+|++++.++..++++++.+.|++++++++..+ +.+..+
T Consensus 299 ~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~ 378 (438)
T 1wyu_A 299 FILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPKPFFNEF 378 (438)
T ss_dssp EEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCSSBCSEE
T ss_pred eeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCCCeEEEE
Confidence 00 00 00 011111 11 233 33377788899999999999999999999999999998765 344556
Q ss_pred EEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEE-EeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 405 CFRVLPSASGLGDGKANEGANELNRKLLESINASGQLY-VSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 405 ~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~-~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
+|+.... ...+.++|.++|+.+ +.+..+.+..++|++++ +.+|++|+++++++|++++
T Consensus 379 ~~~~~~~----------------~~~~~~~L~~~gi~v~~~~~~~~~~~~lRis~~-~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 379 ALALPKD----------------PEAVRRALAERGFHGATPVPREYGENLALFAAT-ELHEEEDLLALREALKEVL 437 (438)
T ss_dssp EEECSSC----------------HHHHHHHHHHTTCCCCEECCTTSCSSEEEEECC-TTCCHHHHHHHHHHHHHHC
T ss_pred EEeCCCC----------------HHHHHHHHHHCCceeccccccccCCCeEEEEec-ccCCHHHHHHHHHHHHHHh
Confidence 6654211 245677777778743 13333234678999995 6788999999999998753
No 18
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.97 E-value=6.7e-29 Score=250.98 Aligned_cols=357 Identities=14% Similarity=0.080 Sum_probs=240.9
Q ss_pred CCCCCcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceE-EcCCchHH
Q 038818 71 WQSPYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGV-IQGTTCEA 149 (486)
Q Consensus 71 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~-~t~ggt~a 149 (486)
..+|.++.+.|++...+..+.+.+... ... ..++...++..++++++++++|.+.. ..+ +++|||+|
T Consensus 7 ~~~~~~~~~~p~p~~~~~~v~~a~~~~---~~~--~~~~~~~~~~~~l~~~la~~~g~~~~-------~~~~~~~s~t~a 74 (416)
T 3isl_A 7 LCTPLRTIMTPGPVEVDPRVLRVMSTP---VVG--QFDPAFTGIMNETMEMLRELFQTKNR-------WAYPIDGTSRAG 74 (416)
T ss_dssp CCCCCCEECSSSSCCCCHHHHHHTTSC---CCC--TTSHHHHHHHHHHHHHHHHHTTCCCS-------EEEEEESCHHHH
T ss_pred cCcccceeecCCCcCcCHHHHHHhccc---CCC--CccHHHHHHHHHHHHHHHHHhCCCCC-------cEEEecCcHHHH
Confidence 446677777777666555555544331 111 23345577888999999999998765 344 88999999
Q ss_pred HHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH--HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHC
Q 038818 150 ILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA--LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQA 227 (486)
Q Consensus 150 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~ 227 (486)
+..++.+... +++.|+++..+|++ +.++++..|+ +++.+|+++ ++.+|+++|+++|++..
T Consensus 75 l~~~~~~l~~-----------~gd~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~-- 136 (416)
T 3isl_A 75 IEAVLASVIE-----------PEDDVLIPIYGRFGYLLTEIAERYGA---NVHMLECEW--GTVFDPEDIIREIKKVK-- 136 (416)
T ss_dssp HHHHHHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCHHHHHHHHHHHC--
T ss_pred HHHHHHHhcC-----------CCCEEEEecCCcccHHHHHHHHhcCC---eeEEEecCC--CCCCCHHHHHHHHhhCC--
Confidence 9877776532 66778888899998 7788999999 999999986 46899999999998532
Q ss_pred CCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcce
Q 038818 228 GLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCC 307 (486)
Q Consensus 228 g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g 307 (486)
+.+|++++++|++|.+.|+++|+++|++||+++|+|++|+.+....+. .. .++|+++.++|||+++|.|+|
T Consensus 137 ---~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-~~-----~~~d~~~~s~~K~l~g~~g~g 207 (416)
T 3isl_A 137 ---PKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKV-DE-----WKIDAAIGGTQKCLSVPSGMA 207 (416)
T ss_dssp ---CSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCT-TT-----TTCSEEECCSSSTTCCCSSEE
T ss_pred ---CcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcch-hh-----cCCCEEEecCccccCCCCCeE
Confidence 347899999999999999999999999999999999999755443221 11 168999999999999999999
Q ss_pred EEEeeCchHHHHHhcCC---cc--------cccCccCCCCCccCC-------CCccccC-CCC-CCchHHHHHHHHhchH
Q 038818 308 CLWVKNPNALIKALSTN---PE--------FLRNKASDSKQVVDY-------KDWQITL-SRR-FRALKLWLVLRSFGVA 367 (486)
Q Consensus 308 ~~~~~~~~~~~~~~~~~---~~--------y~~~~~~~~~~~~~~-------~~~~~~~-sr~-~~~l~~~~~l~~~g~~ 367 (486)
+++++++.. ....... .+ +............+. ....+.. +.. ....++..++..+...
T Consensus 208 ~~~~~~~~~-~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~ 286 (416)
T 3isl_A 208 PITYNERVA-DVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEE 286 (416)
T ss_dssp EEEECHHHH-HHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred EEEECHHHH-HHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 998876532 2221110 00 000000000000000 0001111 111 1123445566655556
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCC---eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhc-CcEEE
Q 038818 368 NLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRN---FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINAS-GQLYV 443 (486)
Q Consensus 368 g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~ 443 (486)
+++++.++..++++++.+.|++. ++++..++. ..+++|.+.... + ..++.+.|.++ |+.+.
T Consensus 287 g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~------------~--~~~l~~~L~~~~gi~v~ 351 (416)
T 3isl_A 287 GLETRFERHRHHEAALAAGIKAM-GLRLFGDDSCKMPVVTCVEIPGGI------------D--GESVRDMLLAQFGIEIA 351 (416)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCTTEEEEECCTTC------------C--HHHHHHHHHHHHCEECB
T ss_pred hHHHHHHHHHHHHHHHHHHHHHc-CCEeccCccccCCcEEEEeCCCCC------------C--HHHHHHHHHHhCCEEEe
Confidence 68899999999999999999986 888765532 357777764211 1 24566777666 86433
Q ss_pred eeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 444 SHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 444 ~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
.+....+..++|++++...+++++|+++++.|+++++++
T Consensus 352 ~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~ 390 (416)
T 3isl_A 352 SSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRH 390 (416)
T ss_dssp CCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHc
Confidence 222112356899999666667756999999999998765
No 19
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.97 E-value=2.8e-28 Score=243.09 Aligned_cols=343 Identities=12% Similarity=0.115 Sum_probs=235.4
Q ss_pred cceecCCCCCHHHHHHHH---HHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHH
Q 038818 76 YFAYFPSSGSIAGFLGEM---LSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILC 152 (486)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~---l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~ 152 (486)
|+++..+++.++.++..+ +...+......|..+.....+..++++++++++|.+.+ .+++|+|||+|+..
T Consensus 3 yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-------~i~~~~g~~~a~~~ 75 (382)
T 4hvk_A 3 YFDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGG-------TVVFTSGATEANNL 75 (382)
T ss_dssp BCBTTTCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTE-------EEEEESSHHHHHHH
T ss_pred eecCCCcCCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcC-------eEEEECCchHHHHH
Confidence 556655555555444332 22222211223444455677888999999999999764 68999999999988
Q ss_pred HHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH---cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCC
Q 038818 153 TLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI---AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGL 229 (486)
Q Consensus 153 al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~---~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~ 229 (486)
++.+......+ +++.|+++..+|+++..++.. .|+ +++.+|+++ ++.+|+++|++++++.
T Consensus 76 ~~~~~~~~~~~-------~gd~vi~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~----- 138 (382)
T 4hvk_A 76 AIIGYAMRNAR-------KGKHILVSAVEHMSVINPAKFLQKQGF---EVEYIPVGK--YGEVDVSFIDQKLRDD----- 138 (382)
T ss_dssp HHHHHHHHHGG-------GCCEEEEETTCCHHHHHHHHHHHHTTC---EEEEECBCT--TSCBCHHHHHHHCCTT-----
T ss_pred HHHHhhhhhcC-------CCCEEEECCCCcHHHHHHHHHHHhcCC---EEEEeccCC--CCCcCHHHHHHHhccC-----
Confidence 88876531101 577888999999998887666 488 999999985 5699999999998653
Q ss_pred ccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEE
Q 038818 230 IPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCL 309 (486)
Q Consensus 230 ~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~ 309 (486)
+.+|+++.++|++|.+.|+++|.++|++||+ +|+|++|+.+....+ ... .++|+++.++||++ +|.|+|++
T Consensus 139 -~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~-~~~-----~~~d~~~~s~~K~~-g~~g~g~~ 209 (382)
T 4hvk_A 139 -TILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQIEVD-VEK-----IGADMLTISSNDIY-GPKGVGAL 209 (382)
T ss_dssp -EEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCC-HHH-----HTCSEEEEESGGGT-SCTTCEEE
T ss_pred -ceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCC-chh-----cCCCEEEEeHHHhc-CCCceEEE
Confidence 4589999999999999999999999999999 999999976554332 111 16899999999975 57789999
Q ss_pred EeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCC-C-CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Q 038818 310 WVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSR-R-FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELV 387 (486)
Q Consensus 310 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr-~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L 387 (486)
+++++.. .. +++..... ......+. . ....++..++. +..++++++.++..++++++.+.|
T Consensus 210 ~~~~~~~------~~-~~~~~~~~---------~~~~~~~~~~~~~~~~~~~al~-~~~~~~~~~~~~~~~~~~~l~~~L 272 (382)
T 4hvk_A 210 WIRKEAK------LQ-PVILGGGQ---------ENGLRSGSENVPSIVGFGKAAE-ITAMEWREEAERLRRLRDRIIDNV 272 (382)
T ss_dssp EEETTCC------CC-CSSCSSCT---------GGGTSCSCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCccC------cC-cccccCCC---------cCccccCCcCHHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHHH
Confidence 9987631 11 11111100 00001110 1 11122233333 234688899999999999999999
Q ss_pred hCCCCeEEecCCC---eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeEC-------------C-
Q 038818 388 GGDNRFEIVAPRN---FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVA-------------G- 450 (486)
Q Consensus 388 ~~~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-------------~- 450 (486)
+++|++++..++. .++++|.+.... ...+.+.|.++|+.+..+.... +
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~ 337 (382)
T 4hvk_A 273 LKIEESYLNGHPEKRLPNNVNVRFSYIE---------------GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGL 337 (382)
T ss_dssp TTSTTEEECSCSSSBCTTEEEEEETTCC---------------HHHHHHHHHHTTCBCBCC--------CCCHHHHHTTC
T ss_pred hcCCCeEEeCCccccCCCEEEEEECCCC---------------HHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCC
Confidence 9999999875542 247778775321 2356667777787432221110 0
Q ss_pred -----EeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 451 -----IYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 451 -----~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
..++|+++. +.++++|++++++.|+++++++.+
T Consensus 338 ~~~~~~~~iRl~~~-~~~t~e~i~~~~~~l~~~~~~~~~ 375 (382)
T 4hvk_A 338 KHEEAHGTLLLTLG-RYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp CHHHHHTEEEEECC-TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhcCCeEEEEcC-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 468999995 577888999999999999887654
No 20
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.96 E-value=7.6e-28 Score=236.33 Aligned_cols=388 Identities=12% Similarity=0.075 Sum_probs=246.6
Q ss_pred CCCCCCCCCHHHHHHHHHhhhcCCCcCCCCCCcceecCCC----CCHHHHHHHH---HHhhcCCCccccccChh------
Q 038818 44 ESAPYNPEPIETILQDVQQHIVPGITHWQSPYYFAYFPSS----GSIAGFLGEM---LSSGFNVVGFNWMSSPA------ 110 (486)
Q Consensus 44 ~~~p~~~~~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~----~~~~~~~~~~---l~~~~n~~~~~~~~~~~------ 110 (486)
..+|++|-+.+.|---|.++-.-. +-+|.+.+--+ --...++... +....+.++.--+.-|.
T Consensus 39 r~~P~~g~~d~~ie~~l~~la~md-----snn~~~~~g~GERE~Rv~s~lv~rrh~~~~HGiGRSGd~~~~QPKAaGssl 113 (501)
T 3hl2_A 39 GKCPENGWDESTLELFLHELAIMD-----SNNFLGNCGVGEREGRVASALVARRHYRFIHGIGRSGDISAVQPKAAGSSL 113 (501)
T ss_dssp CCCCSSCCCHHHHHHHHHHHHTTB-----GGGCSSCCCCSSCCCCCSCHHHHHHTTTCCSCBSCSSCTTCCCTTBHHHHH
T ss_pred CCCCccCCCHHHHHHHHHHHHhhc-----cCCCcccCCcccchHHHHHHHHHhhccCcccCCCCccccccCCCCccchHH
Confidence 479999999888776666543222 22344443211 1122222221 12223333322222221
Q ss_pred -hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHH
Q 038818 111 -ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAA 189 (486)
Q Consensus 111 -~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~ 189 (486)
...-|..+.+||+.+ |+|... ..++++|+|-+++..+.++..... .+...|+++..+|.|+.+++
T Consensus 114 l~~ltn~l~ld~L~~~-G~~~~~------~~flVnGsTgg~lamilaa~r~~r-------pg~d~VIvpRn~HKSv~kAl 179 (501)
T 3hl2_A 114 LNKITNSLVLDIIKLA-GVHTVA------NCFVVPMATGMSLTLCFLTLRHKR-------PKAKYIIWPRIDQKSCFKSM 179 (501)
T ss_dssp HHHHHHHHHHHHHHHT-TCTTCC------EEEEESSCHHHHHHHHHHHHHHHC-------TTCCEEEEECCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCCCCC------cEEEECcHHHHHHHHHHHHcCccc-------CCCCEEEEecchHHHHHHHH
Confidence 234566777888888 999753 678899999666666555544310 02367778999999999999
Q ss_pred HHcCCCCCCeEEEecCC-CCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcc-ccccCCchHHHHHHHHhCceEEeec
Q 038818 190 QIAGIDPKNFRAIKTTK-SSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTA-ITTVDPLGPLCDIAKRYSIWVHVDA 267 (486)
Q Consensus 190 ~~~G~g~~~v~~v~~d~-~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~-~G~idpl~~I~~i~~~~g~~lhvD~ 267 (486)
.++|+ .+++|+... ++.+.+|++.|+++|++.. ...++++++..++. .|.++||++|+++|++||+|+|||+
T Consensus 180 iL~Gl---~Pv~V~p~~d~~~~~id~e~le~aI~e~g---a~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDe 253 (501)
T 3hl2_A 180 ITAGF---EPVVIENVLEGDELRTDLKAVEAKVQELG---PDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNN 253 (501)
T ss_dssp HHTTC---EEEEECEEEETTEEEECHHHHHHHHHHHC---GGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEEC
T ss_pred HHcCC---eEEEEeeeecccccCCCHHHHHHHHHhcC---CCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeC
Confidence 99999 888887621 1257999999999999862 12334444444333 4577999999999999999999999
Q ss_pred cccchhccCccchh-hhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccc
Q 038818 268 AYAGSACICPEFRH-FIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQI 346 (486)
Q Consensus 268 a~g~~~~~~~~~~~-~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 346 (486)
|||+.+.+.+.... .+. +.+||.++.|+||++.+|.|++++++++++.+.+... .|....
T Consensus 254 AhGah~~~~~~lp~sA~~-~GrAD~vVqS~HK~llvpIGG~ii~~~d~e~l~~~~~---~yPGr~--------------- 314 (501)
T 3hl2_A 254 AYGVQSSKCMHLIQQGAR-VGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEISK---MYPGRA--------------- 314 (501)
T ss_dssp TTCTTCHHHHHHHHHHHH-HSCCCEEEEEHHHHHCCCSSCEEEEESCHHHHHHHHH---TSCSCB---------------
T ss_pred cchhhhhhhhhhHHHHHh-cCCCcEEEecccccceeecCceEEEeCCHHHHHHHHH---hCCCCC---------------
Confidence 99997755543221 122 2249999999999999999999999999877654322 221100
Q ss_pred cCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC---CeEEecCC-CeeEEEEEeecCCCCCCCCCCcc
Q 038818 347 TLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDN---RFEIVAPR-NFAVVCFRVLPSASGLGDGKANE 422 (486)
Q Consensus 347 ~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~-~~~~v~f~~~~~~~~~~~~~~~~ 422 (486)
..+.++.+|+++..+|.+||+++++++.+++++|+++|+++. +-+++..+ ....+++.+..... ....
T Consensus 315 ---S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~-----~~~~ 386 (501)
T 3hl2_A 315 ---SASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDE-----HRDK 386 (501)
T ss_dssp ---CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCT-----TTSC
T ss_pred ---CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEEecccccc-----cccc
Confidence 023568899999999999999999999999999999998753 34555444 22234444432210 0011
Q ss_pred chHHHHHHHHHHHHhcCcEEEeee--------eEC---------CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhhc
Q 038818 423 GANELNRKLLESINASGQLYVSHG--------MVA---------GIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILAT 485 (486)
Q Consensus 423 ~~~~~~~~l~~~l~~~g~~~~~~~--------~~~---------~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~~ 485 (486)
....+...|+.+- -+|.=++.++ .+. ...++=++. ...++++|||.+++.|+++..++.++
T Consensus 387 ~~t~~gs~Lf~r~-vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a~-aiG~~~~~v~~~~~~l~~~~~~~~~~ 464 (501)
T 3hl2_A 387 AVTQLGSMLFTRQ-VSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAAS-AIGMKMQDVDLFIKRLDRCLKAVRKE 464 (501)
T ss_dssp HHHHHHHHHHHTT-CCSCEEECTTCCEEETTEEESSTTTTSSCCSSCEEEEEC-CTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred cHHHHHHHHHhcC-CCcceeecCCCceEECCeeecCcccCCCCCCchHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 2223333333321 1222123222 111 134566654 56889999999999999999877543
No 21
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.96 E-value=2.6e-28 Score=244.52 Aligned_cols=358 Identities=11% Similarity=0.037 Sum_probs=240.3
Q ss_pred CCCCcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHH
Q 038818 72 QSPYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAIL 151 (486)
Q Consensus 72 ~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~ 151 (486)
..|+++.+.+++...+..+.+.+..... . ...+....+..++++++++++|.+... .+++|+|||+|+.
T Consensus 20 ~~~~~~~~~p~p~~~~~~v~~a~~~~~~---~--~~~~~~~~~~~~l~~~la~~~~~~~~~------~v~~~~gg~~al~ 88 (393)
T 3kgw_A 20 SVPTRLLLGPGPSNLAPRVLAAGSLRMI---G--HMQKEMLQIMEEIKQGIQYVFQTRNPL------TLVVSGSGHCAME 88 (393)
T ss_dssp CCCCCEECSSSCCCCCHHHHHHTTCCCC---C--TTSHHHHHHHHHHHHHHHHHHTCCCSE------EEEESCCTTTHHH
T ss_pred CCccceeccCCCCCCCHHHHHHhccccc---C--cccHHHHHHHHHHHHHHHHHhCCCCCc------EEEEeCCcHHHHH
Confidence 3567778888776666656555544221 1 123455677788999999999987542 4789999999998
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEecCCCchH--HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCC
Q 038818 152 CTLAAARDQILNEIGRENISRLVVYGSDQTHSA--LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGL 229 (486)
Q Consensus 152 ~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~ 229 (486)
.++.+... +++.|+++..+|++ +...++..|. +++.+|+++ ++.+|+++|+++|++..
T Consensus 89 ~~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~--~~~~d~~~l~~~i~~~~---- 148 (393)
T 3kgw_A 89 TALFNLLE-----------PGDSFLTGTNGIWGMRAAEIADRIGA---RVHQMIKKP--GEHYTLQEVEEGLAQHK---- 148 (393)
T ss_dssp HHHHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCHHHHHHHHHHHC----
T ss_pred HHHHhcCC-----------CCCEEEEEeCCchhHHHHHHHHHcCC---ceEEEeCCC--CCCCCHHHHHHHHhhCC----
Confidence 88776633 56677777778864 4778888999 999999975 45899999999998731
Q ss_pred ccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEE
Q 038818 230 IPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCL 309 (486)
Q Consensus 230 ~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~ 309 (486)
+.+|+++.++|++|.+.|+++|.++|++||+|+++|++|+.+....+. .. .++|.+++++||++++|.|+|++
T Consensus 149 -~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~-~~-----~~~d~~~~s~sK~~~~~~g~g~~ 221 (393)
T 3kgw_A 149 -PVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYM-DQ-----QGIDIMYSSSQKVLNAPPGISLI 221 (393)
T ss_dssp -CSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCT-TT-----TTCCEEEEESSSTTCCCSSCEEE
T ss_pred -CcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCcccch-hh-----cCCCEEEecCcccccCCCceeEE
Confidence 347899999999999999999999999999999999999744332211 11 26899999999999988899999
Q ss_pred EeeCchHHHHHhcCCc---ccccCccC--CCCCccCCCCccccCCCC-CCchHHHHHHHHhchHHHHHHHHHHHHHHHHH
Q 038818 310 WVKNPNALIKALSTNP---EFLRNKAS--DSKQVVDYKDWQITLSRR-FRALKLWLVLRSFGVANLRNFLRSHVRMAQLF 383 (486)
Q Consensus 310 ~~~~~~~~~~~~~~~~---~y~~~~~~--~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l 383 (486)
+++++. ......... .+...... ...+......+. ..+.. ....++..++..+..++++++.++..++++++
T Consensus 222 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 299 (393)
T 3kgw_A 222 SFNDKA-KYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVI-HHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHL 299 (393)
T ss_dssp EECHHH-HHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCC-CCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred EECHHH-HHHHhccCCCCCceeecHHHHHHhhhhccccCCC-CCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 987653 222211111 11000000 000000000000 01111 11234445555555667889999999999999
Q ss_pred HHHHhCCCCeEEecCCC----eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhc-CcEEEeeeeECCEeEEEEEe
Q 038818 384 QELVGGDNRFEIVAPRN----FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINAS-GQLYVSHGMVAGIYFIRFAV 458 (486)
Q Consensus 384 ~~~L~~~~~~~~~~~~~----~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~lR~~~ 458 (486)
.+.|+++ ++++..++. ..+++|.+.... ...++.+.|.++ |+.+..+....+..++|+++
T Consensus 300 ~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~ 364 (393)
T 3kgw_A 300 HKHLQEM-GLKFFVKDPEIRLPTITTVTVPAGY--------------NWRDIVSYVLDHFSIEISGGLGPTEERVLRIGL 364 (393)
T ss_dssp HHHHHHT-TCCBSSSSGGGBCSSEEEEECCTTB--------------CHHHHHHHHHHHHCEECBCCCGGGTTTEEEEEC
T ss_pred HHHHHHc-CCeeccCChhhcCCeEEEEeCCCCC--------------CHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEe
Confidence 9999988 787763321 244556654210 123566777666 86433322223456899998
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 459 GATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 459 ~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
+...++++|++++++.|+++++++.+
T Consensus 365 ~~~~~~~~~i~~~~~~l~~~l~~~~~ 390 (393)
T 3kgw_A 365 LGYNATTENVDRVAEALREALQHCPK 390 (393)
T ss_dssp CGGGCCHHHHHHHHHHHHHHHHHSCB
T ss_pred cccCCCHHHHHHHHHHHHHHHHhhhh
Confidence 55567889999999999999987654
No 22
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.96 E-value=4.3e-28 Score=242.48 Aligned_cols=351 Identities=13% Similarity=0.060 Sum_probs=238.4
Q ss_pred CCcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHH
Q 038818 74 PYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCT 153 (486)
Q Consensus 74 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~a 153 (486)
..|+.+...+...+. +.+.+...+.. .| ++....+..++.+++++++|.+.. ..+++|+|||+|+..+
T Consensus 20 ~~~l~~~~~~~~~~~-v~~a~~~~~~~---~~--~~~~~~~~~~~~~~la~~~g~~~~------~~v~~~~g~t~a~~~~ 87 (386)
T 2dr1_A 20 KYKLFTAGPVACFPE-VLEIMKVQMFS---HR--SKEYRKVHMDTVERLREFLEVEKG------EVLLVPSSGTGIMEAS 87 (386)
T ss_dssp CSEECCSSSCCCCHH-HHHHTTSCCCC---TT--SHHHHHHHHHHHHHHHHHHTCSSS------EEEEESSCHHHHHHHH
T ss_pred cceeecCCCcCCcHH-HHHHHhccccc---cc--CHHHHHHHHHHHHHHHHHhCCCCC------cEEEEeCChHHHHHHH
Confidence 356666443334444 44444444321 22 344578888999999999999721 1588999999999888
Q ss_pred HHHHHHHHHHHccccCCCCeEEEecCCCchH--HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCcc
Q 038818 154 LAAARDQILNEIGRENISRLVVYGSDQTHSA--LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIP 231 (486)
Q Consensus 154 l~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p 231 (486)
+.+... +++.|+++..+|++ +..+++..|+ +++.+|+++ ++.+|+++|++++++. ..+
T Consensus 88 ~~~l~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~----~~~ 147 (386)
T 2dr1_A 88 IRNGVS-----------KGGKVLVTIIGAFGKRYKEVVESNGR---KAVVLEYEP--GKAVKPEDLDDALRKN----PDV 147 (386)
T ss_dssp HHHHSC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCHHHHHHHHHHC----TTC
T ss_pred HHHhhc-----------CCCeEEEEcCCchhHHHHHHHHHhCC---ceEEEecCC--CCCCCHHHHHHHHhcC----CCC
Confidence 776532 56778888899998 8888999999 999999975 5689999999999652 124
Q ss_pred EEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEe
Q 038818 232 LFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWV 311 (486)
Q Consensus 232 ~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~ 311 (486)
.+|+++.++|++|.+.|+++|.++|++||+++|+|++|+.+....+ +... ++|+++.++||++++|.|+|++++
T Consensus 148 ~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~di~~~s~sK~~~~~~g~G~~~~ 221 (386)
T 2dr1_A 148 EAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIK-----FDKW-GLDVVFSSSQKAFGVPPGLAIGAF 221 (386)
T ss_dssp CEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCC-----TTTT-TCSEEEEETTSTTCCCSSCEEEEE
T ss_pred cEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCcccc-----cccc-CCcEEEEeccccccCCCceEEEEE
Confidence 5788889999999999999999999999999999999986544221 1111 579999999999999888999998
Q ss_pred eCchHHHHHhcC--CcccccCccCCCCCccCCC-CccccCCCC-CCchHHHHHHHHhchH-HHHHHHHHHHHHHHHHHHH
Q 038818 312 KNPNALIKALST--NPEFLRNKASDSKQVVDYK-DWQITLSRR-FRALKLWLVLRSFGVA-NLRNFLRSHVRMAQLFQEL 386 (486)
Q Consensus 312 ~~~~~~~~~~~~--~~~y~~~~~~~~~~~~~~~-~~~~~~sr~-~~~l~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~ 386 (486)
+++ ... .+.. ..++...... ...... ......+.. ....++..+++.+... +++++.++..++++++.+.
T Consensus 222 ~~~-~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~ 296 (386)
T 2dr1_A 222 SER-FLE-IAEKMPERGWYFDIPL---YVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREG 296 (386)
T ss_dssp CHH-HHH-HHTTCTTCCSTTCHHH---HHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CHH-HHH-HHhcCCCCceEEeHHH---HHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 754 322 2211 0111000000 000000 000001111 1123444555555444 6788999999999999999
Q ss_pred HhCCCCeEEecCC---CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCC
Q 038818 387 VGGDNRFEIVAPR---NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLT 463 (486)
Q Consensus 387 L~~~~~~~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~t 463 (486)
|+++ ++++..++ ..++++|.+.... ...++.+.|.++|+.+..+....+..++|+++. ..+
T Consensus 297 L~~~-g~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~-~~~ 360 (386)
T 2dr1_A 297 VREI-GLDILAEPGHESPTITAVLTPPGI--------------KGDEVYEAMRKRGFELAKGYGSVKEKTFRIGHM-GYM 360 (386)
T ss_dssp HHHT-TCCBSSCTTCBCSSEEEEECCTTC--------------CHHHHHHHHHHTTEECEECCGGGTTTEEEEECC-SSC
T ss_pred HHHc-CCeeCcCccccCCceEEEEcCCCC--------------CHHHHHHHHHHCCeEEecCccccCCCEEEEECC-CCC
Confidence 9988 78776543 3567777764211 134567777777875433322223468999995 467
Q ss_pred cHHHHHHHHHHHHHHHHHHh
Q 038818 464 EDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 464 t~~did~~i~~l~~~~~~l~ 483 (486)
+++|++++++.|+++++++.
T Consensus 361 ~~~~i~~~~~~l~~~~~~~~ 380 (386)
T 2dr1_A 361 KFEDIQEMLDNLREVINELK 380 (386)
T ss_dssp CHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcC
Confidence 88899999999999987653
No 23
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.96 E-value=7.3e-28 Score=241.59 Aligned_cols=356 Identities=12% Similarity=0.045 Sum_probs=234.0
Q ss_pred CCCcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHH
Q 038818 73 SPYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILC 152 (486)
Q Consensus 73 ~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~ 152 (486)
.++.+.+.+++...+..+.+.+...+.. .| ++.......++++++++++|.+... .+++|+|||+|+..
T Consensus 17 ~~~~~~~~~g~~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~l~~~la~~~g~~~~~------~i~~~~g~t~a~~~ 85 (393)
T 2huf_A 17 TPNKLLMGPGPSNAPQRVLDAMSRPILG---HL--HPETLKIMDDIKEGVRYLFQTNNIA------TFCLSASGHGGMEA 85 (393)
T ss_dssp CCCCEECSSSCCCCCHHHHHHTTSCCCC---TT--SHHHHHHHHHHHHHHHHHHTCCCSE------EEEESSCHHHHHHH
T ss_pred CCCeEEecCCCCCCCHHHHHHHHhhhcc---CC--CHHHHHHHHHHHHHHHHHhCCCCCc------EEEEcCcHHHHHHH
Confidence 3445555555544445555555554432 22 3445677788999999999986531 57899999999988
Q ss_pred HHHHHHHHHHHHccccCCCCeEEEecCCCchHH--HHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCc
Q 038818 153 TLAAARDQILNEIGRENISRLVVYGSDQTHSAL--QKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLI 230 (486)
Q Consensus 153 al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~--~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~ 230 (486)
++.+... +++.|+++..+|++. .+.++..|+ +++.+|+++ ++.+|+++|+++|++. .
T Consensus 86 ~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~-----~ 144 (393)
T 2huf_A 86 TLCNLLE-----------DGDVILIGHTGHWGDRSADMATRYGA---DVRVVKSKV--GQSLSLDEIRDALLIH-----K 144 (393)
T ss_dssp HHHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCHHHHHHHHHHH-----C
T ss_pred HHHHHhC-----------CCCEEEEECCCcchHHHHHHHHHcCC---eeEEEeCCC--CCCCCHHHHHHHHhcc-----C
Confidence 8877632 566788888889883 345566788 999999975 4689999999999863 1
Q ss_pred cEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEE
Q 038818 231 PLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLW 310 (486)
Q Consensus 231 p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~ 310 (486)
+.+|++++++|++|.+.|+++|.++|++||+++|+|++++.+....+ +.. .++|+++.++||++++|.|+|+++
T Consensus 145 ~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-----~~~-~~~d~~~~s~sK~l~g~~G~G~~~ 218 (393)
T 2huf_A 145 PSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMF-----MDR-WEIDAMYTGSQKVLGAPPGITPVS 218 (393)
T ss_dssp CSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCC-----TTT-TTCSEEECCSSSTTCCCSSCEEEE
T ss_pred CcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcc-----hhh-cCccEEEECCCcccccCCCeEEEE
Confidence 34788899999999999999999999999999999999865433221 111 158999999999998888999998
Q ss_pred eeCchHHHHHhcC---CcccccCccC--CCCCccCCCCccccCCCCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHH
Q 038818 311 VKNPNALIKALST---NPEFLRNKAS--DSKQVVDYKDWQITLSRRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQ 384 (486)
Q Consensus 311 ~~~~~~~~~~~~~---~~~y~~~~~~--~~~~~~~~~~~~~~~sr~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~ 384 (486)
+++ +........ ..+|...... ..........+. .++... ...++..+++.+..+++.++.++..++++++.
T Consensus 219 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~ 296 (393)
T 2huf_A 219 FSH-RAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIY-HHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLY 296 (393)
T ss_dssp ECH-HHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCC-SCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred ECH-HHHHHHhhcCCCCceEEEchHHHHhhhccccccCCC-CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 864 333322221 1222211000 000000000000 011111 11223335555444568888999999999999
Q ss_pred HHHhCCCCeEEecCC--Cee-EEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhc-CcEEEeeeeECCEeEEEEEecC
Q 038818 385 ELVGGDNRFEIVAPR--NFA-VVCFRVLPSASGLGDGKANEGANELNRKLLESINAS-GQLYVSHGMVAGIYFIRFAVGA 460 (486)
Q Consensus 385 ~~L~~~~~~~~~~~~--~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~lR~~~~~ 460 (486)
+.|+++ ++++..++ ..+ +++|.+.... + ..++.+.|.++ |+.+..+....+..++|++++.
T Consensus 297 ~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~------------~--~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~ 361 (393)
T 2huf_A 297 RGLQDA-GFELYADPKDRLSTVTTIKVPQGV------------D--WLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMG 361 (393)
T ss_dssp HHHHHT-TCCBSSCGGGBCTTEEEEECCTTC------------C--HHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCG
T ss_pred HHHHHc-CCeeccCccccCCcEEEEEcCCCC------------C--HHHHHHHHHHhCCEEEecCcccccCCEEEEEccc
Confidence 999988 88776443 233 6677764210 1 23566666654 7643222222245689999965
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHh
Q 038818 461 TLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 461 ~~tt~~did~~i~~l~~~~~~l~ 483 (486)
+.+++++++++++.|+++++++.
T Consensus 362 ~~~~~e~i~~~~~~l~~~~~~~~ 384 (393)
T 2huf_A 362 QNATTERVDRVLQVFQEAVAAVK 384 (393)
T ss_dssp GGCSHHHHHHHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHHHHHHHHHHcC
Confidence 66788899999999999987764
No 24
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.96 E-value=1.3e-27 Score=239.62 Aligned_cols=353 Identities=12% Similarity=0.048 Sum_probs=235.7
Q ss_pred CCCcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHH
Q 038818 73 SPYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILC 152 (486)
Q Consensus 73 ~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~ 152 (486)
++.|+++....+.++. +.+.+...+.. ..++.......++++++++++|.+++ .+++|+|||+|+..
T Consensus 8 ~~~yl~~~~~~~~~~~-v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~t~g~t~a~~~ 74 (392)
T 2z9v_A 8 DPVITLTAGPVNAYPE-VLRGLGRTVLY-----DYDPAFQLLYEKVVDKAQKAMRLSNK-------PVILHGEPVLGLEA 74 (392)
T ss_dssp CCSEECSSSCCCCCHH-HHHHTTSCCCC-----TTSHHHHHHHHHHHHHHHHHTTCSSC-------CEEESSCTHHHHHH
T ss_pred CcceeecCCCcCCCHH-HHHHHhccccc-----cccHHHHHHHHHHHHHHHHHhCCCCC-------EEEEeCCchHHHHH
Confidence 4567776544444444 44444444432 12345566777899999999998754 68999999999988
Q ss_pred HHHHHHHHHHHHccccCCCCeEEEecCCCchHH--HHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCc
Q 038818 153 TLAAARDQILNEIGRENISRLVVYGSDQTHSAL--QKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLI 230 (486)
Q Consensus 153 al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~--~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~ 230 (486)
++.+... +++.|+++..+|++. ...++..|+ +++.+|+++ ++.+|+++|++++++. ..
T Consensus 75 ~~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~----~~ 134 (392)
T 2z9v_A 75 AAASLIS-----------PDDVVLNLASGVYGKGFGYWAKRYSP---HLLEIEVPY--NEAIDPQAVADMLKAH----PE 134 (392)
T ss_dssp HHHHHCC-----------TTCCEEEEESSHHHHHHHHHHHHHCS---CEEEEECCT--TSCCCHHHHHHHHHHC----TT
T ss_pred HHHHhcC-----------CCCEEEEecCCcccHHHHHHHHHcCC---ceEEeeCCC--CCCCCHHHHHHHHhcC----CC
Confidence 8777632 556688888899875 344566798 999999985 4589999999999742 12
Q ss_pred cEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEE
Q 038818 231 PLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLW 310 (486)
Q Consensus 231 p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~ 310 (486)
+.+|++++++|++|.+.|+++|.++|++||+++|+|++|+.+....+ ... . ++|+++.++||++++|.|+|+++
T Consensus 135 ~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~-~~~----~-~~d~~~~s~sK~~~~~~g~G~l~ 208 (392)
T 2z9v_A 135 ITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTH-PED----C-KADIYVTGPNKCLGAPPGLTMMG 208 (392)
T ss_dssp CCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCC-GGG----G-TCSEEEECSSSTTCCCSCCEEEE
T ss_pred CcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCcccc-ccc----c-cceEEEecCcccccCCCceeEEE
Confidence 45788999999999999999999999999999999999976443222 111 1 58999999999999998999999
Q ss_pred eeCchHHHHHhcCC--cc-cccCccCCCCCccCCCCccc-cCCCCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Q 038818 311 VKNPNALIKALSTN--PE-FLRNKASDSKQVVDYKDWQI-TLSRRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQE 385 (486)
Q Consensus 311 ~~~~~~~~~~~~~~--~~-y~~~~~~~~~~~~~~~~~~~-~~sr~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~ 385 (486)
++++ ......... ++ +..+..... . .+..... .++... ...++..++..+...|++++.++..++++++.+
T Consensus 209 ~~~~-~~~~l~~~~~g~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~ 284 (392)
T 2z9v_A 209 VSER-AWAKMKANPLAPRASMLSIVDWE-N--AWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRA 284 (392)
T ss_dssp ECHH-HHHHHHTCTTSCCSSTTCSGGGT-T--TTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred ECHH-HHHHhhhccCCCCceeccHHHHH-h--hhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 8754 222221111 11 111100000 0 0000000 111111 112344555555455688889999999999999
Q ss_pred HHhCCCCeEEecCC----CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhc-CcEEEeeeeECCEeEEEEEecC
Q 038818 386 LVGGDNRFEIVAPR----NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINAS-GQLYVSHGMVAGIYFIRFAVGA 460 (486)
Q Consensus 386 ~L~~~~~~~~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~lR~~~~~ 460 (486)
.|+++ ++++..++ ..++++|++.... + ..++.+.|.++ |+.+..+....+..++|+++..
T Consensus 285 ~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~------------~--~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~ 349 (392)
T 2z9v_A 285 GVTAM-GLSVWAASDSIASPTTTAVRTPDGV------------D--EKALRQAARARYGVVFSSGRGETLGKLTRIGHMG 349 (392)
T ss_dssp HHHHT-TCCBSSSSGGGBCTTEEEEECCTTC------------C--HHHHHHHHHHHHCEECEECCGGGTTTEEEEECCG
T ss_pred HHHHc-CCeeccCCccccCCceEEEECCCCC------------C--HHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcc
Confidence 99887 88876523 3466777764210 1 23567777776 8754433222345689999644
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHh
Q 038818 461 TLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 461 ~~tt~~did~~i~~l~~~~~~l~ 483 (486)
+.++++|++++++.|+++++++.
T Consensus 350 ~~~~~~~i~~~~~~l~~~~~~~~ 372 (392)
T 2z9v_A 350 PTAQPIYAIAALTALGGAMNAAG 372 (392)
T ss_dssp GGCSHHHHHHHHHHHHHHHHHTT
T ss_pred cccCHHHHHHHHHHHHHHHHHcC
Confidence 47788899999999999887653
No 25
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.96 E-value=2.8e-27 Score=236.23 Aligned_cols=342 Identities=12% Similarity=0.096 Sum_probs=231.6
Q ss_pred cceecCCCCCHHHHHHHHHHhhcCC---C-ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHH
Q 038818 76 YFAYFPSSGSIAGFLGEMLSSGFNV---V-GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAIL 151 (486)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~n~---~-~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~ 151 (486)
|+++..+++.++.++..+ ...+.. + ...|..++.......++++++++++|.+++ .+++|+|||+|+.
T Consensus 3 yld~~~~~~~~~~v~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~a~~ 74 (382)
T 4eb5_A 3 YFDYTSAKPVDERILEAM-LPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGG-------TVVFTSGATEANN 74 (382)
T ss_dssp BCBTTTCCCCCHHHHHHH-HHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTE-------EEEEESSHHHHHH
T ss_pred eeccCCCCCCCHHHHHHH-HHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEcCchHHHHH
Confidence 556555455555544333 222211 1 112444455667888899999999998754 6899999999999
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH---cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCC
Q 038818 152 CTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI---AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAG 228 (486)
Q Consensus 152 ~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~---~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g 228 (486)
.++.+.+..+. + +++.|+++..+|+++..++.. .|+ +++.+|+++ ++.+|+++|+++|+++
T Consensus 75 ~~~~~l~~~~~-~------~gd~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~---- 138 (382)
T 4eb5_A 75 LAIIGYAMRNA-R------KGKHILVSAVEHMSVINPAKFLQKQGF---EVEYIPVGK--YGEVDVSFIDQKLRDD---- 138 (382)
T ss_dssp HHHHHHHHHHG-G------GCCEEEEETTCCHHHHHHHHHHTTTTC---EEEEECBCT--TSCBCHHHHHHHCCTT----
T ss_pred HHHHHHHhhcc-C------CCCEEEECCCcchHHHHHHHHHHhCCc---EEEEeccCC--CCccCHHHHHHHhcCC----
Confidence 88888763210 1 566788999999998887765 477 899999975 5689999999988642
Q ss_pred CccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceE
Q 038818 229 LIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCC 308 (486)
Q Consensus 229 ~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~ 308 (486)
+.+|++++++|++|.+.|+++|.++|++||++ |+|++|+.+....+ ... . ++|+++.++||++ +|.|+|+
T Consensus 139 --~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~-~~~----~-~~di~~~s~sK~~-g~~g~G~ 208 (382)
T 4eb5_A 139 --TILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIEVD-VEK----I-GADMLTISSNDIY-GPKGVGA 208 (382)
T ss_dssp --EEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCC-HHH----H-TCSEEEEETGGGT-CCSSCEE
T ss_pred --CeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCcccC-ccc----c-CCCEEEeehHHhc-CCCceEE
Confidence 45788999999999999999999999999999 99999975432221 111 1 5799999999984 5778999
Q ss_pred EEeeCchHHHHHhcCCcccccCccCCCCCccCCCCcccc-CCCCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH
Q 038818 309 LWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQIT-LSRRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQEL 386 (486)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~-~sr~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~ 386 (486)
++++++..+ . +++..... ..... .+... ...++..++..+ .++++++.++..++++++.+.
T Consensus 209 ~~~~~~~~l------~-~~~~~~~~---------~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~l~~~ 271 (382)
T 4eb5_A 209 LWIRKEAKL------Q-PVILGGGQ---------ENGLRSGSENVPSIVGFGKAAEIT-AMEWREEAERLRRLRDRIIDN 271 (382)
T ss_dssp EEEETTCCC------C-CSSCSSCT---------GGGTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcccccc------C-ceecCCCc---------cccccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHH
Confidence 998875211 1 11111000 00001 11111 112333444433 357888999999999999999
Q ss_pred HhCCCCeEEecCCC---eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeE---------------
Q 038818 387 VGGDNRFEIVAPRN---FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMV--------------- 448 (486)
Q Consensus 387 L~~~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--------------- 448 (486)
|+++|++++..++. .++++|.+.+.. ..++.+.|.+.|+.+..+...
T Consensus 272 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g 336 (382)
T 4eb5_A 272 VLKIEESYLNGHPEKRLPNNVNVRFSYIE---------------GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACG 336 (382)
T ss_dssp HTTSTTEEECSCSSSBCTTEEEEEETTSC---------------HHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTT
T ss_pred HhhCCCeEEeCCcccCCCCEEEEEeCCcC---------------HHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcC
Confidence 99988998875432 457777764211 234566666778743322110
Q ss_pred ----CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 449 ----AGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 449 ----~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
.+..++|+++ ...++++|++++++.|+++++++.+
T Consensus 337 ~~~~~~~~~iRi~~-~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 337 LKHEEAHGTLLLTL-GRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp CCHHHHTTEEEEEC-CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhccCCeEEEEC-CCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0246899997 4577888999999999999877653
No 26
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.96 E-value=8.8e-28 Score=241.06 Aligned_cols=346 Identities=13% Similarity=0.055 Sum_probs=233.9
Q ss_pred cceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHH
Q 038818 76 YFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLA 155 (486)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~ 155 (486)
|+....+.+.++. +.+.+...+.. .| ++....+..++.+++++++|.+++. .+++|+|||+|+..++.
T Consensus 36 ~l~~~~~~~~~~~-v~~a~~~~~~~---~~--~~~~~~~~~~~~~~la~~~g~~~~~------~v~~t~g~t~al~~~~~ 103 (393)
T 1vjo_A 36 LLLGPGPSNAHPS-VLQAMNVSPVG---HL--DPAFLALMDEIQSLLRYVWQTENPL------TIAVSGTGTAAMEATIA 103 (393)
T ss_dssp EECSSSCCCCCHH-HHHHHSSCCCC---TT--SHHHHHHHHHHHHHHHHHHTCCCSC------EEEESSCHHHHHHHHHH
T ss_pred eeccCCCCCCCHH-HHHHHhccccc---cc--CHHHHHHHHHHHHHHHHHhCCCCCc------EEEEeCchHHHHHHHHH
Confidence 4444333333343 45555554432 22 3445678889999999999986431 58999999999988887
Q ss_pred HHHHHHHHHccccCCCCeEEEecCCCchH--HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEE
Q 038818 156 AARDQILNEIGRENISRLVVYGSDQTHSA--LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLF 233 (486)
Q Consensus 156 ~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~ 233 (486)
++.. +++.|+++..+|++ +..+++..|+ +++.+|+++ ++.+|+++|++++++. .+.+
T Consensus 104 ~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~-----~~~~ 162 (393)
T 1vjo_A 104 NAVE-----------PGDVVLIGVAGYFGNRLVDMAGRYGA---DVRTISKPW--GEVFSLEELRTALETH-----RPAI 162 (393)
T ss_dssp HHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCHHHHHHHHHHH-----CCSE
T ss_pred hccC-----------CCCEEEEEcCChhHHHHHHHHHHcCC---ceEEEecCC--CCCCCHHHHHHHHhhC-----CceE
Confidence 7643 56678888899998 8899999999 999999985 5689999999999863 1347
Q ss_pred EEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeC
Q 038818 234 LCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKN 313 (486)
Q Consensus 234 vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~ 313 (486)
|+++.++|++|.+.|+++|.++|+++|+++++|++|+.+....+ +.. .++|+++.++||++++|.++|++++++
T Consensus 163 v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~-----~~~-~~~di~~~s~sK~l~~~~~~G~l~~~~ 236 (393)
T 1vjo_A 163 LALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIF-----LDA-WGVDLAYSCSQKGLGCSPGASPFTMSS 236 (393)
T ss_dssp EEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCC-----TTT-TTCSEEECCSSSTTCSCSSCEEEEECH
T ss_pred EEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCccccCcCCc-----ccc-cCccEEEEcCcccccCCCceEEEEECH
Confidence 88899999999999999999999999999999999984322111 111 267999999999999998999999876
Q ss_pred chHHHHHhcC---CcccccCccCCCCCccCCCCccccC-CCC-CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHh
Q 038818 314 PNALIKALST---NPEFLRNKASDSKQVVDYKDWQITL-SRR-FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVG 388 (486)
Q Consensus 314 ~~~~~~~~~~---~~~y~~~~~~~~~~~~~~~~~~~~~-sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~ 388 (486)
+ ........ ..++....... .+ + ........ +.. ....++..+++.+..++++++.++..++++++.+.|+
T Consensus 237 ~-~~~~~~~~~~~~~~~~~~~~~~-~~-~-~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 312 (393)
T 1vjo_A 237 R-AIEKLQRRRTKVANWYLDMNLL-GK-Y-WGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLE 312 (393)
T ss_dssp H-HHHHHHTCSSCCSCSTTCHHHH-HH-H-HSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHhccCCCCCceecCcHhh-hh-h-hccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHH
Confidence 5 22222111 01111100000 00 0 00000111 111 1223445555555455688899999999999999999
Q ss_pred CCCCeEEecCCC---eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhc-CcEEEeeeeECCEeEEEEEecCCCCc
Q 038818 389 GDNRFEIVAPRN---FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINAS-GQLYVSHGMVAGIYFIRFAVGATLTE 464 (486)
Q Consensus 389 ~~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~lR~~~~~~~tt 464 (486)
++ ++++..+.. .++++|.+.... + ..++.+.|.++ |+.+..+....+..++|+++..+.++
T Consensus 313 ~~-g~~~~~~~~~~~~~~~~~~~~~~~------------~--~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~ 377 (393)
T 1vjo_A 313 DI-GLSLHVEKEYRLPTLTTVCIPDGV------------D--GKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSR 377 (393)
T ss_dssp HT-TCCBSSCGGGBCSSEEEEECCTTC------------C--HHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCS
T ss_pred Hc-CCcccCCccccCCcEEEEEcCCCC------------C--HHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCCh
Confidence 87 787765432 356777763210 1 24567777776 87544433233457899996556778
Q ss_pred HHHHHHHHHHHHHHH
Q 038818 465 DRHVIAAWKVVQEKL 479 (486)
Q Consensus 465 ~~did~~i~~l~~~~ 479 (486)
+++++++++.|++++
T Consensus 378 ~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 378 KESVDQLIPALEQVL 392 (393)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 889999999998865
No 27
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.96 E-value=8.9e-28 Score=246.67 Aligned_cols=358 Identities=11% Similarity=0.071 Sum_probs=237.5
Q ss_pred cceecCCCCC---HHHHHHHHHHhhcCCCcccccc-ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHH
Q 038818 76 YFAYFPSSGS---IAGFLGEMLSSGFNVVGFNWMS-SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAIL 151 (486)
Q Consensus 76 ~~~~~~~~~~---~~~~~~~~l~~~~n~~~~~~~~-~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~ 151 (486)
|+.....++. ....+.+.+....+.+...|.. .+....+..++++++++++|++++ +.++|+|+|+++.
T Consensus 70 yld~~~~g~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~t~g~t~al~ 142 (465)
T 3e9k_A 70 YFLGNSLGLQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEK-------EIALMNALTVNLH 142 (465)
T ss_dssp ECBTTTSCCEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGG-------GEEECSCHHHHHH
T ss_pred EecCCccCCChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcC-------CEEEECCHHHHHH
Confidence 5554443332 3333555554433333333332 233445666789999999999865 7899999999887
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEecCCCchH----HHHHHHHcCCCCCCe-----EEEecCCCCCcccCHHHHHHHHH
Q 038818 152 CTLAAARDQILNEIGRENISRLVVYGSDQTHSA----LQKAAQIAGIDPKNF-----RAIKTTKSSSFTLTPESLQAAID 222 (486)
Q Consensus 152 ~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~a~~~~G~g~~~v-----~~v~~d~~~~~~~d~~~L~~~l~ 222 (486)
.++.+.... +.++..|+++..+|++ +...++..|+ ++ ..+|.+ +++.+|+++|+++|+
T Consensus 143 ~~~~~~~~~--------~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~---~~~~~~v~~~~~~--~~~~~d~~~l~~~i~ 209 (465)
T 3e9k_A 143 LLMLSFFKP--------TPKRYKILLEAKAFPSDHYAIESQLQLHGL---NIEESMRMIKPRE--GEETLRIEDILEVIE 209 (465)
T ss_dssp HHHHHHCCC--------CSSSCEEEEETTCCHHHHHHHHHHHHHTTC---CHHHHEEEECCCT--TCSSCCHHHHHHHHH
T ss_pred HHHHHhccc--------cCCCCEEEEcCCcCCchHHHHHHHHHHcCC---cceeeeEEEecCC--CCCccCHHHHHHHHH
Confidence 766665321 2245678899999988 4456777888 64 233544 367999999999998
Q ss_pred HHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccC-
Q 038818 223 LDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFF- 301 (486)
Q Consensus 223 ~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~- 301 (486)
+... .+.+|++++++|++|.+.|+++|.++|++||+++|+|+||+.+....+- ... ++|++++++||+++
T Consensus 210 ~~~~---~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~-~~~-----~~D~~~~s~~K~l~~ 280 (465)
T 3e9k_A 210 KEGD---SIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYL-HDW-----GVDFACWCSYKYLNA 280 (465)
T ss_dssp HHGG---GEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCH-HHH-----TCCEEEECSSSTTCC
T ss_pred hcCC---CeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCch-hhc-----CCCEEEECccccccc
Confidence 6421 3568999999999999999999999999999999999999877654431 111 78999999999995
Q ss_pred CCCcceEEEeeCchHHHHHhcCCcccccCcc-CCC----CCccCCCCccccCCCC--CCchHHHHHHHHhchHHHHHHHH
Q 038818 302 TTLDCCCLWVKNPNALIKALSTNPEFLRNKA-SDS----KQVVDYKDWQITLSRR--FRALKLWLVLRSFGVANLRNFLR 374 (486)
Q Consensus 302 ~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~-~~~----~~~~~~~~~~~~~sr~--~~~l~~~~~l~~~g~~g~~~~~~ 374 (486)
+|.++|+++++++.. ........++..... ... ...+......++.+.. ....++..++..+...+++++.+
T Consensus 281 gp~~~g~l~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~ 359 (465)
T 3e9k_A 281 GAGGIAGAFIHEKHA-HTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRK 359 (465)
T ss_dssp CTTCCCEEEECGGGT-TTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred CCCceEEEEEcHHHH-hhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 788889999876532 111111111111100 000 0000001111222222 12355666777766667899999
Q ss_pred HHHHHHHHHHHHHhCC----------CCeEEecCCC----eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCc
Q 038818 375 SHVRMAQLFQELVGGD----------NRFEIVAPRN----FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQ 440 (486)
Q Consensus 375 ~~~~~a~~l~~~L~~~----------~~~~~~~~~~----~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 440 (486)
+..++++++.+.|+++ ++++++.+.+ .++++|.+... ...+.+.|.++|+
T Consensus 360 ~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~~----------------~~~l~~~L~~~Gi 423 (465)
T 3e9k_A 360 KSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSVP----------------NKDVFQELEKRGV 423 (465)
T ss_dssp HHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECCT----------------TCCHHHHHHTTTE
T ss_pred HHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecCC----------------HHHHHHHHHHCCE
Confidence 9999999999999885 7899886542 67888877521 1245667777787
Q ss_pred EEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 441 LYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 441 ~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
++ . ..+..++|+++++..++++||+++++.|++++++..
T Consensus 424 ~v-~---~~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~~ 462 (465)
T 3e9k_A 424 VC-D---KRNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSAE 462 (465)
T ss_dssp EC-E---EETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC--
T ss_pred EE-e---cCCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhcc
Confidence 43 2 334568999986788899999999999999886543
No 28
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.96 E-value=7.6e-28 Score=240.40 Aligned_cols=323 Identities=13% Similarity=0.092 Sum_probs=223.9
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH--H
Q 038818 108 SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA--L 185 (486)
Q Consensus 108 ~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~ 185 (486)
++....+..++++++++++|.+... ..+++|+|||+|+. ++..... +++.|+++..+|++ +
T Consensus 30 ~~~~~~~~~~~~~~la~~~~~~~~~-----~~v~~~~g~t~al~-~~~~~~~-----------~gd~vi~~~~~~~~~~~ 92 (384)
T 3zrp_A 30 SKEFVEALAYSLKGLRYVMGASKNY-----QPLIIPGGGTSAME-SVTSLLK-----------PNDKILVVSNGVFGDRW 92 (384)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCTTS-----EEEEEESCHHHHHH-HGGGGCC-----------TTCEEEEECSSHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCC-----cEEEEcCCcHHHHH-HHHhhcC-----------CCCEEEEecCCcchHHH
Confidence 4555778888999999999997621 16899999999998 7655422 56778888889976 5
Q ss_pred HHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEe
Q 038818 186 QKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHV 265 (486)
Q Consensus 186 ~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhv 265 (486)
...++..|+ +++.+|++. ++.+|+++|++++++.. +.+|+++.++|++|.+.|+++|.++|++||+++|+
T Consensus 93 ~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~ 162 (384)
T 3zrp_A 93 EQIFKRYPV---NVKVLRPSP--GDYVKPGEVEEEVRKSE-----YKLVALTHVETSTGVREPVKDVINKIRKYVELIVV 162 (384)
T ss_dssp HHHHTTSSC---EEEEECCST--TCCCCHHHHHHHHHHSC-----EEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEE
T ss_pred HHHHHHcCC---cEEEecCCC--CCCCCHHHHHHHHHhCC-----CcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEE
Confidence 666777888 999999986 56899999999998621 45889999999999999999999999999999999
Q ss_pred eccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHH-hc-CCcccccC-ccCCC-CCccCC
Q 038818 266 DAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKA-LS-TNPEFLRN-KASDS-KQVVDY 341 (486)
Q Consensus 266 D~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~-~~-~~~~y~~~-~~~~~-~~~~~~ 341 (486)
|++++.+....+ .. . .++|++++++||++++|.|+|+++++++. .... .. ...++... ..... ...+..
T Consensus 163 D~a~~~~~~~~~-~~----~-~~~d~~~~s~~K~~~~~~g~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (384)
T 3zrp_A 163 DGVSSVGAEEVK-AE----E-WNVDVYLTASQKALGSAAGLGLLLLSPKA-LSILDSQNSIAGYYLDLRNWLPVMRGAEE 235 (384)
T ss_dssp ECTTTTTTSCCC-TT----T-TTCSEEEEETTSTTCCCSSEEEEEECHHH-HHHHHHCCCSCCSTTCHHHHHHHHHHHHT
T ss_pred ECcccccCcccc-cc----c-cCCCEEEecCcccccCCCceEEEEECHHH-HHHhcCCCCCCcccccHHHHHHHHHhhcc
Confidence 999976543221 11 1 16899999999999988899999887653 2222 11 00111100 00000 000000
Q ss_pred CCcccc-CCCC-CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC----CeeEEEEEeecCCCCC
Q 038818 342 KDWQIT-LSRR-FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR----NFAVVCFRVLPSASGL 415 (486)
Q Consensus 342 ~~~~~~-~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~----~~~~v~f~~~~~~~~~ 415 (486)
+ .... ++.. ....++..++..+...+++++.++..++++++.+.|+++ ++++..++ ...+++|.+....
T Consensus 236 ~-~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~--- 310 (384)
T 3zrp_A 236 G-KAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLEIVARRPESYSNTVTGVILKVAD--- 310 (384)
T ss_dssp T-CCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSCSSGGGBCSSEEEEECSSSC---
T ss_pred c-CCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCeEccCcccccCccEEEEECCCCC---
Confidence 0 0000 0111 122344556666656678899999999999999999998 88876554 2456677765311
Q ss_pred CCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 416 GDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 416 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
..++.+.|.++|+.+. +.......++|+++. ..++++|++++++.|+++++++.
T Consensus 311 ------------~~~~~~~l~~~gi~v~-~g~~~~~~~iRi~~~-~~~~~e~i~~~~~~l~~~l~~~~ 364 (384)
T 3zrp_A 311 ------------PQKVLAGTVNEGVEFA-PGVHPAFKYFRIGHM-GWVTPNDAIIAISVIERTLRKLG 364 (384)
T ss_dssp ------------HHHHHHHHHTTTCCCE-ECCCTTCCEEEEECC-SSCCHHHHHHHHHHHHHHHHHHT
T ss_pred ------------HHHHHHHHHHCCEEEe-cCCCCCcCEEEEecc-ccCCHHHHHHHHHHHHHHHHHcC
Confidence 3466777777887433 222111278999985 45788899999999999987653
No 29
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.96 E-value=7.7e-28 Score=237.44 Aligned_cols=343 Identities=12% Similarity=0.061 Sum_probs=227.4
Q ss_pred ecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHH
Q 038818 79 YFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAAR 158 (486)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~ 158 (486)
+.+++...+..+.+.+...+.. ..++.......++++++++++|.+.+. ..+++|+|||+|+..++.+.+
T Consensus 4 ~~~gp~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~~-----~~v~~t~g~t~a~~~~~~~~~ 73 (353)
T 2yrr_A 4 LTPGPTPIPERVQKALLRPMRG-----HLDPEVLRVNRAIQERLAALFDPGEGA-----LVAALAGSGSLGMEAGLANLD 73 (353)
T ss_dssp CSSSSCCCCHHHHGGGGSCCCC-----TTCHHHHHHHHHHHHHHHHHHCCCTTC-----EEEEESSCHHHHHHHHHHTCS
T ss_pred CCCCCCCCCHHHHHHHhccccc-----ccCHHHHHHHHHHHHHHHHHhCCCCCC-----ceEEEcCCcHHHHHHHHHHhc
Confidence 4455444444455555544432 134556677889999999999986210 268999999999987766542
Q ss_pred HHHHHHccccCCCCeEEEecCCCchHH--HHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEe
Q 038818 159 DQILNEIGRENISRLVVYGSDQTHSAL--QKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCA 236 (486)
Q Consensus 159 ~~~~~~~~~~~~~~~~v~~s~~~H~s~--~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~ 236 (486)
. +.|+++..+|++. .+.++..|+ +++.+|+++ ++.+|+++|++++++. .+.+|++
T Consensus 74 ------------~-d~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~-----~~~~v~~ 130 (353)
T 2yrr_A 74 ------------R-GPVLVLVNGAFSQRVAEMAALHGL---DPEVLDFPP--GEPVDPEAVARALKRR-----RYRMVAL 130 (353)
T ss_dssp ------------C-CCEEEEECSHHHHHHHHHHHHTTC---CEEEEECCT--TSCCCHHHHHHHHHHS-----CCSEEEE
T ss_pred ------------C-CcEEEEcCCCchHHHHHHHHHcCC---ceEEEeCCC--CCCCCHHHHHHHHHhC-----CCCEEEE
Confidence 2 3466777888874 566788899 999999975 5689999999999762 1347888
Q ss_pred ecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchH
Q 038818 237 TVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNA 316 (486)
Q Consensus 237 ~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~ 316 (486)
+.++|++|.+.|+++|.++|++||+|+|+|++|+.+....+ ... . ++|.+++++|||+++|.|+|+++++++.
T Consensus 131 ~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~~~-~~~----~-~~d~~~~s~~K~~~~~~g~G~~~~~~~~- 203 (353)
T 2yrr_A 131 VHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGMLPFS-MRA----M-GVDYAFTGSQKCLSAPPGLAPIAASLEA- 203 (353)
T ss_dssp ESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCC-HHH----H-TCSEEECCTTSTTCCCSSCEEEEECHHH-
T ss_pred EccCCCcceecCHHHHHHHHHHcCCeEEEEcCccccccccc-ccc----c-CceEEEecCcccccCCCceEEEEECHHH-
Confidence 99999999999999999999999999999999964433221 111 1 5799999999999988899999887653
Q ss_pred HHHHhcCCcccccCccCCCCCccCCCCccccCCCCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Q 038818 317 LIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEI 395 (486)
Q Consensus 317 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 395 (486)
.. .+...+.+...... ...... . ....++... ...++..++..+...+++++.++..++++++.+.|+++ ++++
T Consensus 204 ~~-~l~~~~~~~~~~~~-~~~~~~-~-~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 278 (353)
T 2yrr_A 204 RK-AFTGKRGWYLDLAR-VAEHWE-R-GGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GFRP 278 (353)
T ss_dssp HH-HCCCCSCSTTCHHH-HHHHHT-T-CCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred HH-HhccCCCccccHHH-Hhhhhh-c-CCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCcc
Confidence 22 22211111100000 000000 0 000111111 11334455665555668889999999999999999988 8988
Q ss_pred ecCC--CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHH-HHH
Q 038818 396 VAPR--NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVI-AAW 472 (486)
Q Consensus 396 ~~~~--~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did-~~i 472 (486)
..++ ...+++|++.... + ..++.+.|.++|+.+..+.......++|+++.. ..+++|++ +++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~------------~--~~~~~~~l~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~ 343 (353)
T 2yrr_A 279 YPKASPLPTVLVVRPPEGV------------D--ADRLVRALYAEGVAVAGGIGPTRGQVLRLGLMG-EGARREAYQAFL 343 (353)
T ss_dssp SCSSSBCTTEEEEECCTTC------------C--HHHHHHHHHHTTEECEECCGGGTTTCEEEECSG-GGSCHHHHHHHH
T ss_pred ccCccCCCeEEEEECCCCC------------C--HHHHHHHHHHCCEEEeCCccccCCCeEEEecCc-cCCHHHHHHHHH
Confidence 7543 3345677764210 1 345677777778754333322335689999854 44556888 999
Q ss_pred HHHHHHHHH
Q 038818 473 KVVQEKLDG 481 (486)
Q Consensus 473 ~~l~~~~~~ 481 (486)
+.|++++++
T Consensus 344 ~~l~~~l~~ 352 (353)
T 2yrr_A 344 KALDRALAL 352 (353)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhh
Confidence 999988753
No 30
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.96 E-value=9.6e-27 Score=235.83 Aligned_cols=343 Identities=13% Similarity=0.122 Sum_probs=232.5
Q ss_pred CcceecCCCCCHHHHHHHHHHhhcC--CC-c---c-ccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCch
Q 038818 75 YYFAYFPSSGSIAGFLGEMLSSGFN--VV-G---F-NWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTC 147 (486)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~n--~~-~---~-~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt 147 (486)
-|+++..+++.++. +.+.+...+. .. . . .+..+........++++++++++|.+.+ .+++|+|||
T Consensus 24 iyld~~~~~~~~~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-------~v~~~~ggt 95 (423)
T 3lvm_A 24 IYLDYSATTPVDPR-VAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPR-------EIVFTSGAT 95 (423)
T ss_dssp EECBTTTCCCCCHH-HHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGG-------GEEEESSHH
T ss_pred EeecCCCcCCCCHH-HHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCC-------eEEEeCChH
Confidence 46666555544444 4444444443 11 1 1 2233344567778899999999999765 689999999
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHc---CCCCCCeEEEecCCCCCcccCHHHHHHHHHHH
Q 038818 148 EAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIA---GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLD 224 (486)
Q Consensus 148 ~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~---G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~ 224 (486)
+|+..++.++++... .+++.|+++..+|+++..++..+ |+ +++.+|+++ ++.+|+++|+++|++.
T Consensus 96 ~a~~~a~~~l~~~~~-------~~gd~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~ 163 (423)
T 3lvm_A 96 ESDNLAIKGAANFYQ-------KKGKHIITSKTEHKAVLDTCRQLEREGF---EVTYLAPQR--NGIIDLKELEAAMRDD 163 (423)
T ss_dssp HHHHHHHHHHHHHHT-------TTCCEEEEETTSCHHHHHHHHHHHHTTC---EEEEECCCT--TSCCCHHHHHHHCCTT
T ss_pred HHHHHHHHHHHHhhc-------cCCCEEEECCccchHHHHHHHHHHHcCC---EEEEeccCC--CCccCHHHHHHhcCCC
Confidence 999999887765321 14678889999999988887555 88 999999986 5799999999998753
Q ss_pred HHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC
Q 038818 225 IQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL 304 (486)
Q Consensus 225 ~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~ 304 (486)
+.+|+++.++|++|.+.|+++|+++|++||+++++|++++.+....+. . . .+.|+++.++||++ +|.
T Consensus 164 ------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~-~----~-~~~di~~~s~sK~~-g~~ 230 (423)
T 3lvm_A 164 ------TILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDL-S----Q-LKVDLMSFSGHKIY-GPK 230 (423)
T ss_dssp ------EEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCT-T----T-SCCSEEEEESTTTT-SCS
T ss_pred ------cEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcCh-h----h-cCCCEEEechHHhc-CCC
Confidence 458889999999999999999999999999999999999875442211 1 1 15899999999964 577
Q ss_pred cceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccC-CCCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHH
Q 038818 305 DCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITL-SRRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQL 382 (486)
Q Consensus 305 ~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~-sr~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~ 382 (486)
|+|+++++++... ....+...... . ..... +... ...++..++..+ .+.++++.++..+++++
T Consensus 231 g~G~~~~~~~~~~-----~~~~~~~~~~~------~---~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~ 295 (423)
T 3lvm_A 231 GIGALYVRRKPRV-----RIEAQMHGGGH------E---RGMRSGTLPVHQIVGMGEAYRIA-KEEMATEMERLRGLRNR 295 (423)
T ss_dssp SCEEEEECBTTBC-----CCCCSSCSSCT------T---TTTCCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeccccC-----CCCccccCCcc------c---ccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 7999998765221 11111111000 0 00001 1011 112233344433 23478889999999999
Q ss_pred HHHHHhCCCCeEEecCCC---eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeE-----------
Q 038818 383 FQELVGGDNRFEIVAPRN---FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMV----------- 448 (486)
Q Consensus 383 l~~~L~~~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----------- 448 (486)
+.+.|+++|++++..++. .++++|.+.... ...+.+.+.+ +.+.+...
T Consensus 296 l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~l~~~l~~---i~v~~g~~~~~~~~~~~~~ 357 (423)
T 3lvm_A 296 LWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVE---------------GESLIMALKD---LAVSSGSACTSASLEPSYV 357 (423)
T ss_dssp HHHHHTTSTTEEEESCSTTBCTTEEEEEETTSC---------------HHHHHHHTTT---EECBCCCC-----CCCCHH
T ss_pred HHHHHhcCCCEEEeCCccccCCCeEEEEeCCCC---------------HHHHHHHHhh---heeccCccccCCCccccHH
Confidence 999999999999886543 357777774321 2244544443 23332211
Q ss_pred ------C---CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 449 ------A---GIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 449 ------~---~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
. ...++|+++. ..++++||+++++.|+++++++.+
T Consensus 358 ~~~~g~~~~~~~~~iRi~~~-~~~t~e~i~~~~~~l~~~~~~~~~ 401 (423)
T 3lvm_A 358 LRALGLNDELAHSSIRFSLG-RFTTEEEIDYTIELVRKSIGRLRD 401 (423)
T ss_dssp HHHHTCCHHHHHTEEEEECC-TTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhCCCccccCceEEEECC-CCCCHHHHHHHHHHHHHHHHHhhc
Confidence 0 1368999985 677888999999999999887654
No 31
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.96 E-value=1.4e-27 Score=235.62 Aligned_cols=340 Identities=14% Similarity=0.034 Sum_probs=227.9
Q ss_pred cCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHH
Q 038818 80 FPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARD 159 (486)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~ 159 (486)
.+++...+..+.+.+...+.. ..++.......++++++++++|.+++ .+++|+|||+|+..++.+...
T Consensus 6 ~~~p~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~-------~i~~~~g~t~a~~~~~~~~~~ 73 (352)
T 1iug_A 6 TPGPVRLHPKALEALARPQLH-----HRTEAAREVFLKARGLLREAFRTEGE-------VLILTGSGTLAMEALVKNLFA 73 (352)
T ss_dssp SSSSCCCCHHHHHHHHSCCCC-----TTSHHHHHHHHHHHHHHHHHHTCSSE-------EEEEESCHHHHHHHHHHHHCC
T ss_pred cCCCCCCCHHHHHHhccCCCC-----ccCHHHHHHHHHHHHHHHHHhCCCCc-------eEEEcCchHHHHHHHHHhccC
Confidence 344444444456666655532 13455566777899999999998754 689999999999888877632
Q ss_pred HHHHHccccCCCCeEEEecCCCchHHH--HHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEee
Q 038818 160 QILNEIGRENISRLVVYGSDQTHSALQ--KAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCAT 237 (486)
Q Consensus 160 ~~~~~~~~~~~~~~~v~~s~~~H~s~~--~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~ 237 (486)
+++.|+++..+|++.. +.++..|+ +++.+|+++ ++.+|+++|++ + .+.+|+++
T Consensus 74 -----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~---~------~~~~v~~~ 128 (352)
T 1iug_A 74 -----------PGERVLVPVYGKFSERFYEIALEAGL---VVERLDYPY--GDTPRPEDVAK---E------GYAGLLLV 128 (352)
T ss_dssp -----------TTCEEEEEECSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCTTTSCC---S------SCSEEEEE
T ss_pred -----------CCCeEEEEeCCchhHHHHHHHHHcCC---ceEEEeCCC--CCCCCHHHHhc---c------CCcEEEEE
Confidence 5667888888999964 45566788 999999975 46899998876 1 24478889
Q ss_pred cCCccccccCCchHHHHHHHHh--CceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCch
Q 038818 238 VGTTAITTVDPLGPLCDIAKRY--SIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPN 315 (486)
Q Consensus 238 ~gtt~~G~idpl~~I~~i~~~~--g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~ 315 (486)
+++|++|.+.|+++|.++|++| |+++|+|++|+.+....+ ... .++|+++.++|||+++|.|+|+++++++.
T Consensus 129 ~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~-~~~-----~~~d~~~~s~~K~~~~~~g~G~~~~~~~~ 202 (352)
T 1iug_A 129 HSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVA-LEA-----MGVDAAASGSQKGLMCPPGLGFVALSPRA 202 (352)
T ss_dssp SEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCC-SGG-----GTCSEEEEESSSTTCCCSCEEEEEECHHH
T ss_pred EecCCcceecCHHHHHHHHHhhCCCCEEEEECCccccCccee-ccc-----cCeeEEEecCcccccCCCceeEEEECHHH
Confidence 9999999999999999999999 999999999975433222 111 15899999999999999899999986542
Q ss_pred HHHHHhcCCcccccCccCCCCCccCCCCccccCCCCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Q 038818 316 ALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFE 394 (486)
Q Consensus 316 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 394 (486)
. . .+.. ..+...-.. ............+... ...++..++..+... ++++.++..++++++.+.|+++ +++
T Consensus 203 ~-~-~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~~-g~~ 274 (352)
T 1iug_A 203 L-E-RLKP-RGYYLDLAR---ELKAQKEGESAWTPAINLVLAVAAVLEEVLPR-LEEHLALKAWQNALLYGVGEEG-GLR 274 (352)
T ss_dssp H-H-TCCC-CSSTTCHHH---HHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred H-H-HhhC-CCceeeHHH---HHhhcccCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHC-CCc
Confidence 2 2 1111 001000000 0000000000011111 112334445544333 7888999999999999999988 898
Q ss_pred EecCC-CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHH
Q 038818 395 IVAPR-NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWK 473 (486)
Q Consensus 395 ~~~~~-~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~ 473 (486)
+..++ ..++++|.+.... + ..++.+.|.++|+.+..+....+..++|+++. ..++++|++++++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~------------~--~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~ 339 (352)
T 1iug_A 275 PVPKRFSPAVAAFYLPEGV------------P--YARVKEAFAQRGAVIAGGQGPLKGKVFRLSLM-GAYDRYEALGVAG 339 (352)
T ss_dssp ESCSSBCTTCEEEECCTTC------------C--HHHHHHHHHTTTEECEECCGGGTTTEEEECCC-SSCCHHHHHHHHH
T ss_pred ccccccCCeEEEEEcCCCC------------C--HHHHHHHHHHCCEEEEeCCCccCCCEEEEEcc-ccCCHHHHHHHHH
Confidence 87543 4567777764210 1 24577777788875433321123568999995 4667889999999
Q ss_pred HHHHHHHHHhhc
Q 038818 474 VVQEKLDGILAT 485 (486)
Q Consensus 474 ~l~~~~~~l~~~ 485 (486)
.|+++++++...
T Consensus 340 ~l~~~~~~~~~~ 351 (352)
T 1iug_A 340 MFREVLEEILPA 351 (352)
T ss_dssp HHHHHHHHHC--
T ss_pred HHHHHHHHhcCC
Confidence 999999887543
No 32
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.96 E-value=1.2e-27 Score=237.13 Aligned_cols=344 Identities=11% Similarity=0.040 Sum_probs=229.3
Q ss_pred CcceecCCCCCHHHHHHHHHHhhc-CCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHH
Q 038818 75 YYFAYFPSSGSIAGFLGEMLSSGF-NVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCT 153 (486)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~-n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~a 153 (486)
+++.+.|++...+..+.+.+...+ ++....+..++...++.+++++++++++|.++.. .+++|+|||+|+..+
T Consensus 4 ~~~~~~p~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~------~v~~~~g~t~al~~~ 77 (362)
T 3ffr_A 4 NKIYFTPGPSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSNY------EVLFLASATEIWERI 77 (362)
T ss_dssp CCEEECSSSCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTE------EEEEESCHHHHHHHH
T ss_pred cceeccCCCcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCCc------EEEEeCCchHHHHHH
Confidence 356677776555544444443333 3221122346677788889999999999986432 689999999999877
Q ss_pred HHHHHHHHHHHccccCCCCeEEEecCCCchH--HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCcc
Q 038818 154 LAAARDQILNEIGRENISRLVVYGSDQTHSA--LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIP 231 (486)
Q Consensus 154 l~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p 231 (486)
+.+... + .+++....|++ +...++..|+ +++.++.+. ++.+|+++|+ +++ .+
T Consensus 78 ~~~l~~-----------~--~~i~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~--~~~------~~ 131 (362)
T 3ffr_A 78 IQNCVE-----------K--KSFHCVNGSFSKRFYEFAGELGR---EAYKEEAAF--GKGFYPADIT--VPA------DA 131 (362)
T ss_dssp HHHHCS-----------S--EEEEEECSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCGGGCC--CCT------TC
T ss_pred HHhccC-----------C--cEEEEcCcHHHHHHHHHHHHhCC---CeEEEecCC--CCCCCHHHHh--ccC------Cc
Confidence 776532 4 34444456666 4456778898 999999875 5689999998 322 24
Q ss_pred EEEEeecCCccccccCCchHHHHHHHHh-CceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEE
Q 038818 232 LFLCATVGTTAITTVDPLGPLCDIAKRY-SIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLW 310 (486)
Q Consensus 232 ~~vv~~~gtt~~G~idpl~~I~~i~~~~-g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~ 310 (486)
.+|++++++|++|.+.|+++|+++|++| |+++|+|++|+.+....+ +..+|+++.++||++++|.|+|+++
T Consensus 132 ~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~--------~~~~d~~~~s~~K~~~~~~G~g~~~ 203 (362)
T 3ffr_A 132 EIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFD--------WTKIDSVFFSVQKCFGLPAGLGVWI 203 (362)
T ss_dssp CEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCC--------TTSCSEEEEETTSTTCCCSCCEEEE
T ss_pred cEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcccC--------hhHCcEEEEecccccCCCCceEEEE
Confidence 5888999999999999999999999999 999999999975443221 1238999999999999888999988
Q ss_pred eeCchHHHHHhcCC-----cccccCccCCCCCccCCCCccccCCCC-CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHH
Q 038818 311 VKNPNALIKALSTN-----PEFLRNKASDSKQVVDYKDWQITLSRR-FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQ 384 (486)
Q Consensus 311 ~~~~~~~~~~~~~~-----~~y~~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~ 384 (486)
++++. ..+..... .++...... ............+.. ....++..+++.+..++++++.++..++++++.
T Consensus 204 ~~~~~-~~~~~~~~~gg~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~ 279 (362)
T 3ffr_A 204 LNDRV-IEKSKALLAKRKSIGTYHTIPS---MLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALIN 279 (362)
T ss_dssp EEHHH-HHHHHHHHHTTCCCCSTTSHHH---HHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred ECHHH-HHHhhhccccCCCCcccccHHH---HHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 87642 22111110 011100000 000000000011111 122344555655555678899999999999999
Q ss_pred HHHhCCCCeEEecCC----CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecC
Q 038818 385 ELVGGDNRFEIVAPR----NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGA 460 (486)
Q Consensus 385 ~~L~~~~~~~~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~ 460 (486)
+.|+++|++++..++ ...+++|.+.. . ..++.+.|.++|+.+..+....+..++|++++
T Consensus 280 ~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-~---------------~~~~~~~l~~~gi~~~~g~~~~~~~~iRis~~- 342 (362)
T 3ffr_A 280 TYIESSKVFSFGVEDAKLRSMTTIVANTTM-L---------------PGEINKILEPFDMAVGAGYGSKKETQIRIANF- 342 (362)
T ss_dssp HHHHHCSSEEESSSCGGGBCSSEEEEEESS-C---------------HHHHHHHHGGGTEEEEECSGGGTTTEEEEECC-
T ss_pred HHHHHccCceeccCChhhcCCceEEEecCC-C---------------HHHHHHHHHHCCeEEecCccccCCCEEEEECC-
Confidence 999999999987522 24567777643 1 34677788888875443332234568999996
Q ss_pred CCCcHHHHHHHHHHHHHHH
Q 038818 461 TLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 461 ~~tt~~did~~i~~l~~~~ 479 (486)
..++++|+++++++|+++.
T Consensus 343 ~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 343 PAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp TTSCHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHh
Confidence 4678889999999998763
No 33
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.95 E-value=7.5e-27 Score=236.16 Aligned_cols=321 Identities=12% Similarity=0.077 Sum_probs=220.4
Q ss_pred HHHHHHHHHHHHHHcCC-CCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH----HH
Q 038818 112 TELENIVMDWLGEMLKL-PKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA----LQ 186 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~-~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~ 186 (486)
.....++++++++++|. +.+ .+++|+|||+|+..++.+++.... .+++.|+++..+|++ +.
T Consensus 71 ~~~~~~l~~~la~~~~~~~~~-------~v~~~~g~t~a~~~~~~~~~~~~~-------~~gd~Vl~~~~~~~~~~~~~~ 136 (420)
T 1t3i_A 71 TDAYEAVRNKVAKFINARSPR-------EIVYTRNATEAINLVAYSWGMNNL-------KAGDEIITTVMEHHSNLVPWQ 136 (420)
T ss_dssp HHHHHHHHHHHHHHTTCSCGG-------GEEEESSHHHHHHHHHHHTHHHHC-------CTTCEEEEETTCCGGGTHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCC-------eEEEcCChHHHHHHHHHHhhhccc-------CCCCEEEECcchhHHHHHHHH
Confidence 45566788999999998 433 689999999999988887742110 156678889999988 56
Q ss_pred HHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEee
Q 038818 187 KAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVD 266 (486)
Q Consensus 187 ~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD 266 (486)
..++..|+ +++.+|+++ ++.+|+++|+++|++. +.+|+++.++|++|.+.|+++|.++|++||+++|+|
T Consensus 137 ~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D 205 (420)
T 1t3i_A 137 MVAAKTGA---VLKFVQLDE--QESFDLEHFKTLLSEK------TKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVD 205 (420)
T ss_dssp HHHHHHCC---EEEEECBCT--TSSBCHHHHHHHCCTT------EEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHhcCc---EEEEeccCC--CCCcCHHHHHHhhCCC------ceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEE
Confidence 77888899 999999974 5789999999998642 457889999999999999999999999999999999
Q ss_pred ccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcC-CcccccCcc-CCCCCccCCCCc
Q 038818 267 AAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALST-NPEFLRNKA-SDSKQVVDYKDW 344 (486)
Q Consensus 267 ~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~-~~~y~~~~~-~~~~~~~~~~~~ 344 (486)
++|+.+.... ..... +.|+++.++||.+ +|.|+|+++++++ ... .+.. ......... ......+.....
T Consensus 206 ~a~~~~~~~~-~~~~~-----~~di~~~s~sK~~-~~~g~G~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (420)
T 1t3i_A 206 ACQSAPHYPL-DVQLI-----DCDWLVASGHKMC-APTGIGFLYGKEE-ILE-AMPPFFGGGEMIAEVFFDHFTTGELPH 276 (420)
T ss_dssp CTTTTTTSCC-CHHHH-----TCSEEEEEGGGTT-SCTTCEEEEECHH-HHH-HSCCCSCSTTSEEEECSSCEEECCTTG
T ss_pred hhhccCCccC-chhhc-----CCCEEEEehhhhc-CCCceEEEEEchH-HHh-hcCceecCCCccccccccccCCCCchh
Confidence 9998654322 12221 5899999999954 5677898888643 332 2221 110000000 000000000001
Q ss_pred cccCCCC-CC-chHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC-----CeeEEEEEeecCCCCCCC
Q 038818 345 QITLSRR-FR-ALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR-----NFAVVCFRVLPSASGLGD 417 (486)
Q Consensus 345 ~~~~sr~-~~-~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----~~~~v~f~~~~~~~~~~~ 417 (486)
.+..+.. .. .+++..+++.+...+++++.++..++++++.+.|++++++++..++ ..++++|.+.+.
T Consensus 277 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~------ 350 (420)
T 1t3i_A 277 KFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAGL------ 350 (420)
T ss_dssp GGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETTB------
T ss_pred hccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCEEEEEECCC------
Confidence 1111111 11 1223335555555578888999999999999999999899988654 367888876421
Q ss_pred CCCccchHHHHHHHHHHHHhcCcEEEeeee--------ECC-EeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 418 GKANEGANELNRKLLESINASGQLYVSHGM--------VAG-IYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 418 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------~~~-~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
+ ..++.+.+.+.|+. +.+.. ..+ ..++|+++. ..++++|+++++++|+++++.+.
T Consensus 351 -------~--~~~~~~~l~~~gi~-v~~~~~~~~~~~~~~g~~~~iRis~~-~~~~~~~i~~~~~~l~~~~~~~~ 414 (420)
T 1t3i_A 351 -------H--ASDVATMVDQDGIA-IRSGHHCTQPLHRLFDASGSARASLY-FYNTKEEIDLFLQSLQATIRFFS 414 (420)
T ss_dssp -------C--HHHHHHHHHTTTEE-CBCSCTTCHHHHHHTTCCCCEEEECC-TTCCHHHHHHHHHHHHHHHHHTC
T ss_pred -------C--HHHHHHHHHHCCeE-EeeccccchHHHHhcCCCCeEEEecC-CCCCHHHHHHHHHHHHHHHHHhc
Confidence 1 23566677777874 33321 113 578999985 56788899999999999988764
No 34
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.95 E-value=5.4e-27 Score=235.46 Aligned_cols=357 Identities=14% Similarity=0.053 Sum_probs=236.1
Q ss_pred CCCCcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHH
Q 038818 72 QSPYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAIL 151 (486)
Q Consensus 72 ~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~ 151 (486)
..++.+.+.+++...+..+.+.+...+.. .| ++.......++++++++++|.+.+. .+++|+|||+++.
T Consensus 15 ~~~~~~~~~~~p~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~l~~~la~~~~~~~~~------~v~~~~g~t~al~ 83 (396)
T 2ch1_A 15 IIPEKIMMGPGPSNCSKRVLTAMTNTVLS---NF--HAELFRTMDEVKDGLRYIFQTENRA------TMCVSGSAHAGME 83 (396)
T ss_dssp CCCCCBCCSSSSCCCCHHHHHHTTSCCCC---TT--CHHHHHHHHHHHHHHHHHHTCCCSC------EEEESSCHHHHHH
T ss_pred CCCcceeecCCCCCCCHHHHHHhcccccc---CC--ChhHHHHHHHHHHHHHHHhCCCCCc------EEEECCcHHHHHH
Confidence 44566667666555555555555544322 23 4444566678899999999987531 4789999999998
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH--HHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCC
Q 038818 152 CTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ--KAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGL 229 (486)
Q Consensus 152 ~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~--~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~ 229 (486)
.++.+... +++.|+++..+|++.. +.++..|+ +++.+|+++ ++.+|+++|++++++..
T Consensus 84 ~~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~~---- 143 (396)
T 2ch1_A 84 AMLSNLLE-----------EGDRVLIAVNGIWAERAVEMSERYGA---DVRTIEGPP--DRPFSLETLARAIELHQ---- 143 (396)
T ss_dssp HHHHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCT--TSCCCHHHHHHHHHHHC----
T ss_pred HHHHHhcC-----------CCCeEEEEcCCcccHHHHHHHHHcCC---ceEEecCCC--CCCCCHHHHHHHHHhCC----
Confidence 88777632 5667888888998864 57788899 999999975 56899999999998631
Q ss_pred ccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEE
Q 038818 230 IPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCL 309 (486)
Q Consensus 230 ~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~ 309 (486)
+.+|+++.++|++|.+.|+++|.++|+++|+++++|++|+.+....+ +... ++|+++.++||++++|.++|++
T Consensus 144 -~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~-----~~~~-~~d~~~~s~~K~~~~~~g~g~~ 216 (396)
T 2ch1_A 144 -PKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFY-----MDKW-EIDAVYTGAQKVLGAPPGITPI 216 (396)
T ss_dssp -CSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCC-----TTTT-TCCEEECCCC-CCCCCSSCEEE
T ss_pred -CCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCCccc-----hhhc-CcCEEEEcCCccccCCCCeEEE
Confidence 34788899999999999999999999999999999999974432211 1111 5799999999999999999988
Q ss_pred EeeCchHHHHHhcC---CcccccCcc-CCC-CCccCCCCccccCCCCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHH
Q 038818 310 WVKNPNALIKALST---NPEFLRNKA-SDS-KQVVDYKDWQITLSRRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLF 383 (486)
Q Consensus 310 ~~~~~~~~~~~~~~---~~~y~~~~~-~~~-~~~~~~~~~~~~~sr~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l 383 (486)
+++++ .+...... ..+++.... ... ........+ ..++... ...++..++..+..++++++.++..++++++
T Consensus 217 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 294 (396)
T 2ch1_A 217 SISPK-ALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKR-YHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQIL 294 (396)
T ss_dssp EECHH-HHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCC-CCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred EECHH-HHHhhhhccCcccceEechHHHHHhhhhhcccCC-CCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 88763 33222111 111111100 000 000000000 0111111 1133444555555567888999999999999
Q ss_pred HHHHhCCCCeEEecCCC---e-eEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhc-CcEEEeeeeECCEeEEEEEe
Q 038818 384 QELVGGDNRFEIVAPRN---F-AVVCFRVLPSASGLGDGKANEGANELNRKLLESINAS-GQLYVSHGMVAGIYFIRFAV 458 (486)
Q Consensus 384 ~~~L~~~~~~~~~~~~~---~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~lR~~~ 458 (486)
.+.|+++ ++++..+.. . .+++|++.... + ..++.+.|.++ |+.+..+.......++|+++
T Consensus 295 ~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~------------~--~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~ 359 (396)
T 2ch1_A 295 YEGLGKM-GLDIFVKDPRHRLPTVTGIMIPKGV------------D--WWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGI 359 (396)
T ss_dssp HHHHHHH-TCCBSSCSGGGBCTTEEEEECCTTC------------C--HHHHHHHHHHHHCBCCBCCCGGGTTTEEEEEC
T ss_pred HHHHHHC-CCeeccCCccccCCceEEEEcCCCC------------C--HHHHHHHHHHhCCEEEecCccccCCCEEEEEC
Confidence 9999987 787764432 1 26677764210 1 23566666654 87533222222356899998
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 459 GATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 459 ~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
+.+.++++|++++++.|+++++++.
T Consensus 360 ~~~~~~~e~i~~~~~~l~~~l~~~~ 384 (396)
T 2ch1_A 360 MGECSTVQKIQFYLYGFKESLKATH 384 (396)
T ss_dssp CGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHhC
Confidence 6567789999999999999987764
No 35
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.95 E-value=8.5e-26 Score=225.51 Aligned_cols=309 Identities=13% Similarity=0.129 Sum_probs=214.1
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHH
Q 038818 109 PAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKA 188 (486)
Q Consensus 109 ~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a 188 (486)
........++++++++++|.+.+ .+++|+|||+|+..++.+++.... .+++.|+++..+|+++...
T Consensus 40 ~~~~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~a~~~~~~~~~~~~~-------~~gd~vl~~~~~~~~~~~~ 105 (384)
T 1eg5_A 40 IEANLHMEKAREKVAKVLGVSPS-------EIFFTSCATESINWILKTVAETFE-------KRKRTIITTPIEHKAVLET 105 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCGG-------GEEEESCHHHHHHHHHHHHHHHTT-------TTCCEEEECTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCC-------eEEEECCHHHHHHHHHHhhhhhcc-------CCCCEEEECCCCchHHHHH
Confidence 34456777889999999998754 689999999999988888763100 0567788999999988776
Q ss_pred H---HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhC--ceE
Q 038818 189 A---QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYS--IWV 263 (486)
Q Consensus 189 ~---~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g--~~l 263 (486)
+ +..|+ +++.+|+++ ++.+|+++|++++++. +.+|+++.++|++|.+.|+++|.++|++|| +++
T Consensus 106 ~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~l 174 (384)
T 1eg5_A 106 MKYLSMKGF---KVKYVPVDS--RGVVKLEELEKLVDED------TFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLV 174 (384)
T ss_dssp HHHHHHTTC---EEEECCBCT--TSCBCHHHHHHHCCTT------EEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEE
T ss_pred HHHHHhcCC---EEEEEccCC--CCccCHHHHHHHhCCC------CeEEEEECCCCCcccccCHHHHHHHHHhcCCceEE
Confidence 6 66788 899999875 5789999999988642 457888999999999999999999999999 999
Q ss_pred EeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCC
Q 038818 264 HVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKD 343 (486)
Q Consensus 264 hvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 343 (486)
|+|++|+.+.... . +... +.|++++++||+++ |.|+|+++++++. ...+ ++..... ..
T Consensus 175 i~Dea~~~~~~~~-~----~~~~-~~di~~~s~sK~~g-~~G~G~~~~~~~~------~~~~-~~~~~~~-------~~- 232 (384)
T 1eg5_A 175 HVDAVQTIGKIPF-S----LEKL-EVDYASFSAHKFHG-PKGVGITYIRKGV------PIRP-LIHGGGQ-------ER- 232 (384)
T ss_dssp EEECTTTTTTSCC-C----CTTT-CCSEEEEEGGGGTS-CTTCEEEEECTTS------CCCC-SBCSSCT-------TT-
T ss_pred EEEhhhhcCCccc-C----chhc-CCCEEEecHHHhcC-CCceEEEEEcCCC------cccc-ccccCcc-------cc-
Confidence 9999987332211 1 1222 58999999999855 5568999887652 0111 1111000 00
Q ss_pred ccccCCCCCCch---HHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC---CeeEEEEEeecCCCCCCC
Q 038818 344 WQITLSRRFRAL---KLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR---NFAVVCFRVLPSASGLGD 417 (486)
Q Consensus 344 ~~~~~sr~~~~l---~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~---~~~~v~f~~~~~~~~~~~ 417 (486)
....+ ....+ +++.+++.. .++++++.++..++++++.+.|++ +++++..++ ....+.|.+...
T Consensus 233 -~~~~~-~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~~------ 302 (384)
T 1eg5_A 233 -GLRSG-TQNVPGIVGAARAMEIA-VEELSEAAKHMEKLRSKLVSGLMN-LGAHIITPLEISLPNTLSVSFPNI------ 302 (384)
T ss_dssp -TTBCS-CCCHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHHT-TTCEECSCTTSBCTTEEEEECTTC------
T ss_pred -cccCC-CCChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHhCC-CCeEEeCCcccCCCCEEEEEeCCC------
Confidence 00111 11222 333444432 356788899999999999999998 689887553 234667766421
Q ss_pred CCCccchHHHHHHHHHHHHhcCcEEEeeeeEC-------------------CEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 418 GKANEGANELNRKLLESINASGQLYVSHGMVA-------------------GIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 418 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-------------------~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
+ ..++.+.|.+.|+.+..+..+. +..++|+++. +.++++|++++++.|+++
T Consensus 303 -------~--~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~ 372 (384)
T 1eg5_A 303 -------R--GSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLC-KYNTEEEVDYFLKKIEEI 372 (384)
T ss_dssp -------C--HHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECC-TTCCHHHHHHHHHHHHHH
T ss_pred -------C--HHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECC-CCCCHHHHHHHHHHHHHH
Confidence 1 2356667777787433221111 1468999984 567888999999999999
Q ss_pred HHHHhh
Q 038818 479 LDGILA 484 (486)
Q Consensus 479 ~~~l~~ 484 (486)
++++.+
T Consensus 373 ~~~~~~ 378 (384)
T 1eg5_A 373 LSFLDL 378 (384)
T ss_dssp HHHC--
T ss_pred HHHHHh
Confidence 887654
No 36
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.95 E-value=2.5e-26 Score=231.11 Aligned_cols=322 Identities=16% Similarity=0.096 Sum_probs=218.2
Q ss_pred hHHHHHHHHHHHHHHcCC-CCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHH----
Q 038818 111 ATELENIVMDWLGEMLKL-PKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSAL---- 185 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~-~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~---- 185 (486)
......++++++++++|. +.+ .+++|+|||+|+..++.+++.... .+++.|+++..+|++.
T Consensus 65 ~~~~~~~l~~~la~~~~~~~~~-------~v~~~~g~t~a~~~~~~~~~~~~~-------~~gd~vl~~~~~~~~~~~~~ 130 (406)
T 1kmj_A 65 ATEKMENVRKRASLFINARSAE-------ELVFVRGTTEGINLVANSWGNSNV-------RAGDNIIISQMEHHANIVPW 130 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCSCGG-------GEEEESSHHHHHHHHHHHTHHHHC-------CTTCEEEEETTCCGGGTHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCCC-------eEEEeCChhHHHHHHHHHhhhhcC-------CCCCEEEEecccchHHHHHH
Confidence 355667788999999998 333 689999999999988888752110 1566788888898764
Q ss_pred HHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEe
Q 038818 186 QKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHV 265 (486)
Q Consensus 186 ~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhv 265 (486)
...++..|+ +++.+|+++ ++.+|+++|+++|++. +.+|+++.++|++|.+.|+++|+++|++||+++++
T Consensus 131 ~~~~~~~g~---~~~~~~~~~--~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~ 199 (406)
T 1kmj_A 131 QMLCARVGA---ELRVIPLNP--DGTLQLETLPTLFDEK------TRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLV 199 (406)
T ss_dssp HHHHHHHTC---EEEEECBCT--TSCBCGGGHHHHCCTT------EEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEE
T ss_pred HHHHHhCCC---EEEEEecCC--CCCcCHHHHHHHhccC------CeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEE
Confidence 345677899 999999875 5689999999998642 45788999999999999999999999999999999
Q ss_pred eccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcC-CcccccCccC-CC-CCccCCC
Q 038818 266 DAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALST-NPEFLRNKAS-DS-KQVVDYK 342 (486)
Q Consensus 266 D~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~-~~~y~~~~~~-~~-~~~~~~~ 342 (486)
|++|+.+....+ ... . +.|+++.++||++ +|.|+|++++++ +... .+.. ..+....... .. .......
T Consensus 200 D~~~~~g~~~~~-~~~----~-~~d~~~~s~~K~~-g~~G~G~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (406)
T 1kmj_A 200 DGAQAVMHHPVD-VQA----L-DCDFYVFSGHKLY-GPTGIGILYVKE-ALLQ-EMPPWEGGGSMIATVSLSEGTTWTKA 270 (406)
T ss_dssp ECTTTTTTSCCC-HHH----H-TCSEEEEEGGGTT-SCTTCEEEEECH-HHHH-HCCCSSCSTTSEEEEETTTEEEECCT
T ss_pred EchhhcCCCCCc-ccc----c-CCCEEEEEchhcc-CCCCcEEEEEeH-HHHh-hcCCcccCCCceeecccccccccCCC
Confidence 999986543221 111 1 5899999999988 566789998864 3332 2211 1000000000 00 0000000
Q ss_pred CccccCCCC-CC-chHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC-CeeEEEEEeecCCCCCCCCC
Q 038818 343 DWQITLSRR-FR-ALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR-NFAVVCFRVLPSASGLGDGK 419 (486)
Q Consensus 343 ~~~~~~sr~-~~-~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~~~v~f~~~~~~~~~~~~~ 419 (486)
.+.++.+.. .. .+++..++..+...+++++.++..++++++.+.|+++|++++..++ ..++++|.+.+.
T Consensus 271 ~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-------- 342 (406)
T 1kmj_A 271 PWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKH-------- 342 (406)
T ss_dssp TGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCSEEEEEETTC--------
T ss_pred chhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCcCCEEEEEECCC--------
Confidence 011111111 11 1222244455544577888899999999999999999899987553 677888876321
Q ss_pred CccchHHHHHHHHHHHHhcCcEEEeeee--------ECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 420 ANEGANELNRKLLESINASGQLYVSHGM--------VAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 420 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
+ ..++.+.+.++|+.+..+.. +....++|+++. ..++++|++++++.|+++++.+
T Consensus 343 -----~--~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~-~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 343 -----H--AYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLA-MYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp -----C--HHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECC-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred -----C--HHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEee-cCCCHHHHHHHHHHHHHHHHhh
Confidence 1 23466677777875433221 122478999995 5678889999999999988764
No 37
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.95 E-value=1.9e-26 Score=229.88 Aligned_cols=342 Identities=11% Similarity=0.016 Sum_probs=223.5
Q ss_pred ecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHH
Q 038818 79 YFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAAR 158 (486)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~ 158 (486)
+.|++...+..+.+.+...+.. ..++....+..++++++++++|.+.+. ...++|+|||+|+..++.+..
T Consensus 23 ~~pgp~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~~~~~la~~~g~~~~~-----~~i~~~~ggt~al~~~~~~~~ 92 (376)
T 3f0h_A 23 FTVGPVMSSEEVRAIGAEQVPY-----FRTTEFSSTMLENEKFMLEYAKAPEGS-----KAVFMTCSSTGSMEAVVMNCF 92 (376)
T ss_dssp CSSSSCCCCHHHHHHHTSCCCC-----CSSHHHHHHHHHHHHHHHHHHTCCTTC-----EEEEESSCHHHHHHHHHHHHC
T ss_pred ecCCCCCCcHHHHHHhcCCCCC-----CCCHHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCChhHHHHHHHHhcc
Confidence 3455555555555555443321 124556677888999999999997531 134558999999988877664
Q ss_pred HHHHHHccccCCCCeEEEecCCCchHH--HHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEe
Q 038818 159 DQILNEIGRENISRLVVYGSDQTHSAL--QKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCA 236 (486)
Q Consensus 159 ~~~~~~~~~~~~~~~~v~~s~~~H~s~--~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~ 236 (486)
. +++.|+++...+++. ...+...|. +++.+|++. ++.+|+++|+++++++ +.+|++
T Consensus 93 ~-----------~gd~vi~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~~~~~------~~~v~~ 150 (376)
T 3f0h_A 93 T-----------KKDKVLVIDGGSFGHRFVQLCEIHEI---PYVALKLEH--GKKLTKEKLYEYDNQN------FTGLLV 150 (376)
T ss_dssp C-----------TTCCEEEEESSHHHHHHHHHHHHTTC---CEEEEECCT--TCCCCHHHHHTTTTSC------CCEEEE
T ss_pred C-----------CCCeEEEEeCChhhHHHHHHHHHcCC---ceEEEeCCC--CCCCCHHHHHHhhccC------ceEEEE
Confidence 3 455566665555553 345677788 999999875 5699999999876432 457888
Q ss_pred ecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchH
Q 038818 237 TVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNA 316 (486)
Q Consensus 237 ~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~ 316 (486)
+.++|++|.+.|+++|+++|++||+++|+|++++.+....+ ... .++|+++.++||++++|.|+|+++++++.
T Consensus 151 ~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~-~~~-----~~~d~~~~s~~K~l~~~~G~g~~~~~~~~- 223 (376)
T 3f0h_A 151 NVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFN-MNE-----CGADVMITGSQKVLACPPGISVIVLAPRG- 223 (376)
T ss_dssp ESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCC-HHH-----HTCSEEEEETTTTTCCCSSCEEEEECHHH-
T ss_pred ecccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCcccc-ccc-----cCccEEEecCcccccCCCceEEEEECHHH-
Confidence 88999999999999999999999999999999976554321 111 15899999999999988899998876543
Q ss_pred HHHHhc-CCcccccCccCCCCCccCCCCccccCCCCCCc---hHHHHHHHHhchH-HHHHHHHHHHHHHHHHHHHHhCCC
Q 038818 317 LIKALS-TNPEFLRNKASDSKQVVDYKDWQITLSRRFRA---LKLWLVLRSFGVA-NLRNFLRSHVRMAQLFQELVGGDN 391 (486)
Q Consensus 317 ~~~~~~-~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~---l~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~ 391 (486)
...... ...++...... ............ .... .++..++..+... +++++.++..++++++.+.|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 297 (376)
T 3f0h_A 224 VERVEKSKVRTMYFDLKD---ALKNQERGQTPF--TPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDL- 297 (376)
T ss_dssp HHHHHTCCCCCSTTCHHH---HHHHHTTTCCSS--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTS-
T ss_pred HHHhhcCCCCceeecHHH---HHhhcccCCCCC--CCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-
Confidence 222221 11111110000 000000000000 1111 3345555555555 68889999999999999999987
Q ss_pred CeEEecCCCee-EEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhc-CcEEEeeeeECCEeEEEEEecCCCCcHHHHH
Q 038818 392 RFEIVAPRNFA-VVCFRVLPSASGLGDGKANEGANELNRKLLESINAS-GQLYVSHGMVAGIYFIRFAVGATLTEDRHVI 469 (486)
Q Consensus 392 ~~~~~~~~~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~lR~~~~~~~tt~~did 469 (486)
++++..+...+ ++.+...+. ...++.+.|.++ |+.+..+....+..++|+++. ..++++|++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~-~~~t~e~i~ 361 (376)
T 3f0h_A 298 PFELVSESPANGVTSVHPTTA---------------NAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHI-GALTHEDNT 361 (376)
T ss_dssp SEEECCSSBBTTEEEEEESSS---------------CHHHHHHHHHHHSSEECEECCGGGTTTCEEEECC-SSCCHHHHH
T ss_pred CCccCccccCceEEEEeCCCC---------------CHHHHHHHHHHhCCEEEecCccccCCCEEEEecC-CCCCHHHHH
Confidence 68876543333 344432211 134567777777 764433322224568999985 467888999
Q ss_pred HHHHHHHHHHHH
Q 038818 470 AAWKVVQEKLDG 481 (486)
Q Consensus 470 ~~i~~l~~~~~~ 481 (486)
++++.|++++++
T Consensus 362 ~~~~~l~~~l~~ 373 (376)
T 3f0h_A 362 TLVNAFKDLQKR 373 (376)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999999998753
No 38
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.95 E-value=6.9e-27 Score=235.02 Aligned_cols=353 Identities=12% Similarity=0.070 Sum_probs=210.1
Q ss_pred CCCCcceecCCCCCHHHHHHHH---HHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchH
Q 038818 72 QSPYYFAYFPSSGSIAGFLGEM---LSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCE 148 (486)
Q Consensus 72 ~~p~~~~~~~~~~~~~~~~~~~---l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~ 148 (486)
.+.-|+++..+++.++.++..+ +...+......+..+.....+..++++++++++|.+++ .+++|+|||+
T Consensus 19 ~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-------~v~~~~g~t~ 91 (400)
T 3vax_A 19 SHMTYLDAAATTRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPD-------ELIFTSGATE 91 (400)
T ss_dssp ---CCCCCCCCSSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGG-------GEEEESCHHH
T ss_pred CCcEEecCCCCCCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCC-------cEEEeCCHHH
Confidence 3455777765555455443322 22222222223444455567778899999999999765 6899999999
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCe-EEEecCCCchHHHHHHHHc---CCCCCCeEEEecCCCCCcccCHHHHHHHHHHH
Q 038818 149 AILCTLAAARDQILNEIGRENISRL-VVYGSDQTHSALQKAAQIA---GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLD 224 (486)
Q Consensus 149 a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~~~a~~~~---G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~ 224 (486)
|+..++.+......+ +++ .|+++..+|+++...+..+ |+ +++.+|+++ ++.+|+++|+++|++.
T Consensus 92 al~~~~~~l~~~~~~-------~gd~~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~ 159 (400)
T 3vax_A 92 SNNIALLGLAPYGER-------TGRRHIITSAIEHKAVLEPLEHLAGRGF---EVDFLTPGP--SGRISVEGVMERLRPD 159 (400)
T ss_dssp HHHHHHHTTHHHHHH-------HTCCEEEEETTSCHHHHHHHHHHHTTTC---EEEEECCCT--TCCCCHHHHHTTCCTT
T ss_pred HHHHHHHHHHHhhcc-------CCCCEEEECccccHhHHHHHHHHHhcCC---eEEEEccCC--CCCcCHHHHHHhcCCC
Confidence 998888877522111 455 7888889999987776654 77 899999885 5799999999998653
Q ss_pred HHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC
Q 038818 225 IQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL 304 (486)
Q Consensus 225 ~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~ 304 (486)
+.+|+++.++|++|.+.|+++|.++|++||+++++|++|+.+....+ +... +|.++.++||+ ++|.
T Consensus 160 ------~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~-----~~~~--~d~~~~s~~K~-~g~~ 225 (400)
T 3vax_A 160 ------TLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGD-----LTTP--IDMISISGHKI-GAPK 225 (400)
T ss_dssp ------EEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGG-----GGSC--CSEEEEETGGG-TSCS
T ss_pred ------ceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcC-----hhhc--CcEEEEeHHHh-CCCC
Confidence 45899999999999999999999999999999999999975443211 2222 89999999995 5577
Q ss_pred cceEEE-eeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchH---HHHHHHHhchHHHHHHHHHHHHHH
Q 038818 305 DCCCLW-VKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALK---LWLVLRSFGVANLRNFLRSHVRMA 380 (486)
Q Consensus 305 ~~g~~~-~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~---~~~~l~~~g~~g~~~~~~~~~~~a 380 (486)
|+|+++ ++++.......... +++..... ......+ ...... +..++..+ .++++++.++..+++
T Consensus 226 g~g~~~~~~~~~~~~~~~~~~-~~~~~~~~---------~~~~~~~-~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~ 293 (400)
T 3vax_A 226 GVGALVTRRREEMDDERVPLE-PIMFGGGQ---------ERKLRPG-TLPVPLIMGLAEAAKIF-EAEHAQWQVAAQDLR 293 (400)
T ss_dssp SCEEEEECBCSSSTTCBCCCC-CSSCSSCT---------GGGTSCS-CCCHHHHHHHHHHHHHH-HHSHHHHHHHHHHHH
T ss_pred ceEEEEEecchhccccccccC-ceecCCCc---------eeeeecC-CCCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHH
Confidence 899999 88743210000011 11111000 0000011 112222 22333322 456788999999999
Q ss_pred HHHHHHHhCCCCeEEecCCC---eeEEEEEeecCCCCCCCCCCccchHHHHHHHH-HHHHhcCcEEEeeee---------
Q 038818 381 QLFQELVGGDNRFEIVAPRN---FAVVCFRVLPSASGLGDGKANEGANELNRKLL-ESINASGQLYVSHGM--------- 447 (486)
Q Consensus 381 ~~l~~~L~~~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~~g~~~~~~~~--------- 447 (486)
+++.+.|+ .+++++..++. .+++.|.+.... ..++.+.+. .-+...|..+.....
T Consensus 294 ~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~l~~~L~~gi~v~~g~~~~~~~~~~~~~~~~~ 361 (400)
T 3vax_A 294 SRLLAGLA-STSFQVNGDQDHVVPHILNLSFEDVD-----------AEAFLVTLKDLVAVATGSASTSASFTPSHVLRAM 361 (400)
T ss_dssp HHHHHHHT-TTTCEECSCTTSBCTTEEEEECTTCC-----------HHHHHHHHHHHHHHTTTTEEEEEEECCHHHHHTT
T ss_pred HHHHHhhC-CCCEEEeCCcccCCCCEEEEEeCCCC-----------HHHHHHHHhcCcEEEecccccCCCCCccHHHHHc
Confidence 99999999 88999876543 357777665321 123333332 112233433322110
Q ss_pred -EC---CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 448 -VA---GIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 448 -~~---~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
.. ...++|+++++..+++++++++++.|++++++
T Consensus 362 g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 362 GLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp TCCHHHHTSEEEEEEEEC--------------------
T ss_pred CCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 00 03789999933567788999999999987653
No 39
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.95 E-value=4e-26 Score=228.68 Aligned_cols=334 Identities=10% Similarity=0.069 Sum_probs=226.9
Q ss_pred HHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcccc
Q 038818 89 FLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRE 168 (486)
Q Consensus 89 ~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~ 168 (486)
.+.+.+...+......|... ..++++++.+++++.+|.+.+. ...++|+|||+|+..++.+...
T Consensus 44 ~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~-----~~i~~~~g~~~a~~~~~~~l~~--------- 107 (391)
T 3dzz_A 44 EIMASMEEKLKVAAFGYESV--PAEYYKAVADWEEIEHRARPKE-----DWCVFASGVVPAISAMVRQFTS--------- 107 (391)
T ss_dssp HHHHHHHHHHTTCCCCCBCC--CHHHHHHHHHHHHHHHSCCCCG-----GGEEEESCHHHHHHHHHHHHSC---------
T ss_pred HHHHHHHHHHhcCcCCCCCC--CHHHHHHHHHHHHHHhCCCCCH-----HHEEECCCHHHHHHHHHHHhCC---------
Confidence 34455555555433344332 5789999999999999954321 2789999999999888776632
Q ss_pred CCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecC-CCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc-
Q 038818 169 NISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTT-KSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV- 246 (486)
Q Consensus 169 ~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d-~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i- 246 (486)
+++.|+++..+|.++..+++..|. +++.+|++ +++++.+|+++|++++++. .+.+|+++.++|++|.+
T Consensus 108 --~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~i~~p~nptG~~~ 177 (391)
T 3dzz_A 108 --PGDQILVQEPVYNMFYSVIEGNGR---RVISSDLIYENSKYSVNWADLEEKLATP-----SVRMMVFCNPHNPIGYAW 177 (391)
T ss_dssp --TTCEEEECSSCCHHHHHHHHHTTC---EEEECCCEEETTEEECCHHHHHHHHTST-----TEEEEEEESSBTTTTBCC
T ss_pred --CCCeEEECCCCcHHHHHHHHHcCC---EEEEeeeeecCCceeecHHHHHHHHhcc-----CceEEEEECCCCCCCccc
Confidence 567888999999999999999999 99999986 2345679999999999631 24578889999999999
Q ss_pred --CCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCC-CCCC--ceeeccccccC-CCCcceEEEeeCchHHHHH
Q 038818 247 --DPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGI-EGAD--SFSLNAHKWFF-TTLDCCCLWVKNPNALIKA 320 (486)
Q Consensus 247 --dpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~-~~aD--si~~~~hK~l~-~p~~~g~~~~~~~~~~~~~ 320 (486)
+++++|+++|++||+++|+|++|+++.............. ...| .++.++||+++ .+..+|++++++++.....
T Consensus 178 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~ 257 (391)
T 3dzz_A 178 SEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARA 257 (391)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHHH
Confidence 8899999999999999999999976543221111111111 1245 78899999997 5567898888766553322
Q ss_pred hcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEecCC
Q 038818 321 LSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGG-DNRFEIVAPR 399 (486)
Q Consensus 321 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~ 399 (486)
......+.. .........++..++.. +.+.++++.++..++++++.+.|++ +|++++..+.
T Consensus 258 ~~~~~~~~~-----------------~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 319 (391)
T 3dzz_A 258 EESFFLAGI-----------------GEPNLLAIPAAIAAYEE-GHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSN 319 (391)
T ss_dssp HHHHHHHTC-----------------SSCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCC
T ss_pred HHHHHhhcc-----------------CCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccC
Confidence 110000000 00001122233333333 4566888889999999999999998 8899886443
Q ss_pred CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 400 NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 400 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
....+.+.+.... . ...++.+.|. +.|+.+.++..+. +..++|++++ +++++|+++++.|.
T Consensus 320 ~~~~~~~~~~~~~---------~----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~i~~~l~~l~ 383 (391)
T 3dzz_A 320 ASYLAWVDISALG---------M----NAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA---CPKELVIDGMQRLK 383 (391)
T ss_dssp BSSEEEEECGGGC---------S----CHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC---SCHHHHHHHHHHHH
T ss_pred ceEEEEEehhhcC---------C----CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec---CCHHHHHHHHHHHH
Confidence 3333335554311 0 1245666664 6787544333222 3578999985 57889999999999
Q ss_pred HHHHHH
Q 038818 477 EKLDGI 482 (486)
Q Consensus 477 ~~~~~l 482 (486)
++++++
T Consensus 384 ~~l~~~ 389 (391)
T 3dzz_A 384 QGVLNL 389 (391)
T ss_dssp HHHHTC
T ss_pred HHHHHh
Confidence 988764
No 40
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.95 E-value=3.4e-26 Score=226.82 Aligned_cols=315 Identities=12% Similarity=0.089 Sum_probs=211.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH-HHHHHHH
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA-LQKAAQI 191 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-~~~a~~~ 191 (486)
....++++++++++|.+.+. ..+++|+|||+|+..++.+++.. ++.+++.+...|.+ +..++..
T Consensus 37 ~~~~~l~~~la~~~g~~~~~-----~~v~~~~g~t~a~~~~~~~~~~~----------gd~vi~~~~~~~~~~~~~~~~~ 101 (366)
T 1m32_A 37 GVVEQIRQQLTALATASEGY-----TSVLLQGSGSYAVEAVLGSALGP----------QDKVLIVSNGAYGARMVEMAGL 101 (366)
T ss_dssp TTHHHHHHHHHHHHCSSSSE-----EEEEEESCHHHHHHHHHHHSCCT----------TCCEEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcC-----cEEEEecChHHHHHHHHHHhcCC----------CCeEEEEeCCCccHHHHHHHHH
Confidence 44556778889999843211 25899999999998888776431 33455566677876 5677888
Q ss_pred cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccc
Q 038818 192 AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAG 271 (486)
Q Consensus 192 ~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~ 271 (486)
.|+ +++.+|++. ++.+|+++|+++|++.. .+.+|+++.++|++|.+.|+++|.++|++||+++|+|++|+.
T Consensus 102 ~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~~----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~ 172 (366)
T 1m32_A 102 MGI---AHHAYDCGE--VARPDVQAIDAILNADP----TISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSF 172 (366)
T ss_dssp HTC---CEEEEECCT--TSCCCHHHHHHHHHHCT----TCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTT
T ss_pred hCC---ceEEEeCCC--CCCCCHHHHHHHHhcCC----CeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCccc
Confidence 899 999999975 56899999999998631 144677888999999999999999999999999999999975
Q ss_pred hhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcC-CcccccCccCCCCCccCCCCccc-cCC
Q 038818 272 SACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALST-NPEFLRNKASDSKQVVDYKDWQI-TLS 349 (486)
Q Consensus 272 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~-~~s 349 (486)
+....+ +.. .+.|+++.++||++++|.|+|+++++++. . +.+.. ..+|..... ..+..+.. ...
T Consensus 173 ~~~~~~-----~~~-~~~di~~~s~~K~~~~~~g~G~~~~~~~~-~-~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 238 (366)
T 1m32_A 173 GGIPMD-----IAA-LHIDYLISSANKCIQGVPGFAFVIAREQK-L-AACKGHSRSLSLDLY------AQWRCMEDNHGK 238 (366)
T ss_dssp TTSCCC-----TTT-TTCSEEEEESSSTTCCCSSEEEEEEEHHH-H-TTCTTCCSCSTTCHH------HHHHHHHHTTTC
T ss_pred cCcCcc-----ccc-cCccEEEecCcccccCCCceEEEEECHHH-H-HhhcCCCCCccccHH------HHHhhhcccCCC
Confidence 443221 111 15899999999999888889999987642 1 12211 111111000 00000000 011
Q ss_pred CC--CCc---hHHHHHHHHhchHH-HHHHHHHHHHHHHHHHHHHhCCCCeEEecCC--Cee-EEEEEeecC-CCCCCCCC
Q 038818 350 RR--FRA---LKLWLVLRSFGVAN-LRNFLRSHVRMAQLFQELVGGDNRFEIVAPR--NFA-VVCFRVLPS-ASGLGDGK 419 (486)
Q Consensus 350 r~--~~~---l~~~~~l~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~--~~~-~v~f~~~~~-~~~~~~~~ 419 (486)
++ ... .++..++..+...| ++++.++..++++++.+.|+++ ++++..++ ..+ +++|.+... .
T Consensus 239 ~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------- 310 (366)
T 1m32_A 239 WRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GFNTLLDDELHSPIITAFYSPEDPQ------- 310 (366)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECCCCTT-------
T ss_pred CCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC-CCeeccCchhcCceEEEEEcCccCC-------
Confidence 11 111 23444555554444 7888999999999999999987 78766442 344 677776420 1
Q ss_pred CccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 420 ANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 420 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
. ...++.+.|.++|+. +.+....+..++|+++. ..++++|+++++++|++++++
T Consensus 311 --~----~~~~~~~~l~~~gi~-v~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~ 364 (366)
T 1m32_A 311 --Y----RFSEFYRRLKEQGFV-IYPGKVSQSDCFRIGNI-GEVYAADITALLTAIRTAMYW 364 (366)
T ss_dssp --C----CHHHHHHHHHHTTEE-CEECCCSSSCEEEEECC-SSCCHHHHHHHHHHHHHHCTT
T ss_pred --C----CHHHHHHHHHHCCEE-EECCcCCCCCEEEEecC-CCCCHHHHHHHHHHHHHHHHh
Confidence 0 134567777777864 33333335678999985 467788999999999987654
No 41
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.94 E-value=4e-26 Score=228.07 Aligned_cols=356 Identities=12% Similarity=0.057 Sum_probs=226.1
Q ss_pred CCcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHH
Q 038818 74 PYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCT 153 (486)
Q Consensus 74 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~a 153 (486)
|+.+.+.+++...+..+.+.+...... . .+|.......+++++++++++..... ....+++|+|||+|+..+
T Consensus 4 ~~~~~~~p~p~~~~~~v~~a~~~~~~~---~--~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~v~~~~g~t~al~~~ 75 (385)
T 2bkw_A 4 SVDTLLIPGPIILSGAVQKALDVPSLG---H--TSPEFVSIFQRVLKNTRAVFKSAAAS---KSQPFVLAGSGTLGWDIF 75 (385)
T ss_dssp CCCEECSSSSCCCCHHHHHTTSCCCCC---T--TSHHHHHHHHHHHHHHHHHTTCCGGG---TCEEEEEESCTTHHHHHH
T ss_pred ccceeecCCCcCchHHHHHHHhccccc---c--CCHHHHHHHHHHHHHHHHHhCCCCCC---CCceEEEcCchHHHHHHH
Confidence 455677777666555555555443322 1 24555555666888888888764210 012689999999999888
Q ss_pred HHHHHHHHHHHccccCCCCeEEEecCC--CchHHHHHHHHcCCCCCCeEEEec-CCCCCcccCHHHHHHHHHHHHHCCCc
Q 038818 154 LAAARDQILNEIGRENISRLVVYGSDQ--THSALQKAAQIAGIDPKNFRAIKT-TKSSSFTLTPESLQAAIDLDIQAGLI 230 (486)
Q Consensus 154 l~~a~~~~~~~~~~~~~~~~~v~~s~~--~H~s~~~a~~~~G~g~~~v~~v~~-d~~~~~~~d~~~L~~~l~~~~~~g~~ 230 (486)
+.+..... .+++.|++... .|.++...++..|+ +++.+|+ +. ++.+|+++|+++|++. .
T Consensus 76 ~~~~~~~~--------~~gd~vlv~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~~d~~~l~~~l~~~-----~ 137 (385)
T 2bkw_A 76 ASNFILSK--------APNKNVLVVSTGTFSDRFADCLRSYGA---QVDVVRPLKI--GESVPLELITEKLSQN-----S 137 (385)
T ss_dssp HHHHSCTT--------CSCCEEEEECSSHHHHHHHHHHHHTTC---EEEEECCSST--TSCCCHHHHHHHHHHS-----C
T ss_pred HHHHhccC--------CCCCeEEEEcCCcchHHHHHHHHHcCC---ceEEEecCCC--CCCCCHHHHHHHHhcC-----C
Confidence 87764100 04445544433 34455577888899 9999998 64 5789999999999761 1
Q ss_pred cEEEEeecCCccccccCCchHHHHHHHHh--CceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceE
Q 038818 231 PLFLCATVGTTAITTVDPLGPLCDIAKRY--SIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCC 308 (486)
Q Consensus 231 p~~vv~~~gtt~~G~idpl~~I~~i~~~~--g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~ 308 (486)
+.+|++++++|++|.+.|+++|+++|++| |+++|+|++|+.+....+ +... ++|++++++||++++|.|+|+
T Consensus 138 ~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~d~~~~s~~K~~~~~~G~G~ 211 (385)
T 2bkw_A 138 YGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFE-----FDEW-GVDFALTASQKAIGAPAGLSI 211 (385)
T ss_dssp CSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCC-----TTTT-TCSEEEEESSSTTCCCSCEEE
T ss_pred CCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCcccc-----cccc-CceEEEecCccccccCCcceE
Confidence 34788899999999999999999999999 999999999975443221 1112 589999999999998889999
Q ss_pred EEeeCchHHHHHhc-----CCcccccCcc-CCC-CCccCCCCccccCCCC-CCchHHHHHHHHhchHHHHHHHHHHHHHH
Q 038818 309 LWVKNPNALIKALS-----TNPEFLRNKA-SDS-KQVVDYKDWQITLSRR-FRALKLWLVLRSFGVANLRNFLRSHVRMA 380 (486)
Q Consensus 309 ~~~~~~~~~~~~~~-----~~~~y~~~~~-~~~-~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a 380 (486)
++++++. +.+.+. ....|..... ... ............++.. ....++..+++.+...+++++.++..+++
T Consensus 212 ~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~ 290 (385)
T 2bkw_A 212 SLCSSRF-MDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMS 290 (385)
T ss_dssp EEECHHH-HHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred EEEcHHH-HHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 9887653 221221 0001110000 000 0000000000000111 11123344555544456788899999999
Q ss_pred HHHHHHH-hCCCCeEEecCC-----CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeE--CCEe
Q 038818 381 QLFQELV-GGDNRFEIVAPR-----NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMV--AGIY 452 (486)
Q Consensus 381 ~~l~~~L-~~~~~~~~~~~~-----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~~~~ 452 (486)
+++.+.| +++ ++++..+. ..++++|.+.. ..++.+.|.++|+. +.+... .+..
T Consensus 291 ~~l~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~l~~~gi~-v~~g~~~~~~~~ 351 (385)
T 2bkw_A 291 DWFKDSLVNGL-QLTSVSRYPSNMSAHGLTAVYVAD-----------------PPDVIAFLKSHGVV-IAGGIHKDIGPK 351 (385)
T ss_dssp HHHHHHHHTTT-CCEESSCSSSTTBCSSCEEEECSC-----------------HHHHHHHHHHTTEE-CBCCCCTTTGGG
T ss_pred HHHHHHHHHhc-CceecccCcccccCCceEEEecCC-----------------HHHHHHHHHHCCeE-EeCCCCcccCCC
Confidence 9999999 888 88887421 35677776631 23566677677864 333221 1356
Q ss_pred EEEEE-ec-C-CCCcHHHHHHHHHHHHHHHHH
Q 038818 453 FIRFA-VG-A-TLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 453 ~lR~~-~~-~-~~tt~~did~~i~~l~~~~~~ 481 (486)
++|++ +. + +.++++|++++++.|++++++
T Consensus 352 ~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 352 YIRIGHMGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp EEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred EEEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence 89999 53 1 246788999999999988654
No 42
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.94 E-value=9.5e-26 Score=223.06 Aligned_cols=322 Identities=12% Similarity=0.087 Sum_probs=217.0
Q ss_pred HHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcccc
Q 038818 89 FLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRE 168 (486)
Q Consensus 89 ~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~ 168 (486)
.+.+.+...+.. |..+.....+..++.+++++++|.+.+ .+++|+|||+|+..++.+++.
T Consensus 29 ~v~~a~~~~~~~----~~~~~g~~~~~~~~~~~l~~~~g~~~~-------~v~~~~g~t~a~~~~~~~~~~--------- 88 (359)
T 1svv_A 29 KILDLMARDNMT----QHAGYGQDSHCAKAARLIGELLERPDA-------DVHFISGGTQTNLIACSLALR--------- 88 (359)
T ss_dssp HHHHHHHHHTTC----CCCSTTCSHHHHHHHHHHHHHHTCTTS-------EEEEESCHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHHHhh----ccccccccHHHHHHHHHHHHHhCCCCc-------cEEEeCCchHHHHHHHHHHhC---------
Confidence 345555555542 333344567888999999999997654 689999999999988887753
Q ss_pred CCCCeEEEecCCCchHHHH--HHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHH-HCCCccEEEEeecCCccccc
Q 038818 169 NISRLVVYGSDQTHSALQK--AAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDI-QAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 169 ~~~~~~v~~s~~~H~s~~~--a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~-~~g~~p~~vv~~~gtt~~G~ 245 (486)
+++.|+++..+|+++.. .++..|+ +++.+|.+ ++.+|+++|++++++.. +.+..+.+|+++.+ |++|.
T Consensus 89 --~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~ 159 (359)
T 1svv_A 89 --PWEAVIATQLGHISTHETGAIEATGH---KVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGT 159 (359)
T ss_dssp --TTEEEEEETTSHHHHSSTTHHHHTTC---CEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSC
T ss_pred --CCCEEEEcccchHHHHHHHHHhcCCC---eeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCce
Confidence 56788999999999887 4788899 99999985 56899999999998641 22334567888877 68999
Q ss_pred cCC---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCC-CCCCceeeccccccCCCCcceEEEeeCchHHHHHh
Q 038818 246 VDP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGI-EGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKAL 321 (486)
Q Consensus 246 idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~ 321 (486)
+.| +++|+++|++||+++|+|++|.++...........-++ ..+|++++++||++ .|.++|+++++++-. . .+
T Consensus 160 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g-~~~~~g~l~~~~~~~-~-~~ 236 (359)
T 1svv_A 160 QYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAG-GMFGEALIILNDALK-P-NA 236 (359)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTT-CSSCEEEEECSGGGC-T-TH
T ss_pred ecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCC-CCCceEEEEEcccHH-H-HH
Confidence 988 99999999999999999999954322111111000001 26899999999985 478889888865421 1 11
Q ss_pred cCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCe
Q 038818 322 STNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNF 401 (486)
Q Consensus 322 ~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~ 401 (486)
. .+..... .....+. .... .....+..++++++.++..++++++.+.| +.+++++..+...
T Consensus 237 ~---~~~~~~~-----------~~~~~~~--~~~~--~~~~~l~~~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~ 297 (359)
T 1svv_A 237 R---HLIKQRG-----------ALMAKGW--LLGI--QFEVLMKDNLFFELGAHSNKMAAILKAGL-EACGIRLAWPSAS 297 (359)
T ss_dssp H---HHHHHTT-----------CCCTTTH--HHHH--HHHHHTSTTHHHHHHHHHHHHHHHHHHHH-HHTTCCBSSCCSS
T ss_pred H---HHHhcCC-----------cccccch--hhHH--HHHHHHhhhhHHHHHHHHHHHHHHHHHHh-ccCCeEEccCCcc
Confidence 0 0000000 0000000 0111 11223455667888899999999999999 5678887655555
Q ss_pred eEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhc-CcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 402 AVVCFRVLPSASGLGDGKANEGANELNRKLLESINAS-GQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 402 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
+.+.+.+. .++.+.|.++ |+.+.. ....+..++|+++ +..++++|++++++.|+++++
T Consensus 298 ~~~~~~~~-------------------~~~~~~l~~~~gi~v~~-~~~~~~~~iRi~~-~~~~~~~~i~~~~~~l~~~~~ 356 (359)
T 1svv_A 298 NQLFPILE-------------------NTMIAELNNDFDMYTVE-PLKDGTCIMRLCT-SWATEEKECHRFVEVLKRLVA 356 (359)
T ss_dssp SEECBEEE-------------------HHHHHHHTTTEECEEEE-EETTTEEEEEEEC-CTTCCHHHHHHHHHHHHHC--
T ss_pred ceEEEEcC-------------------HHHHHHHHHhcCEEEEe-cccCCCceEEEEc-cCcCCHHHHHHHHHHHHHHHh
Confidence 55544432 2466777777 876522 1123578999997 467788999999999998876
Q ss_pred HH
Q 038818 481 GI 482 (486)
Q Consensus 481 ~l 482 (486)
++
T Consensus 357 ~~ 358 (359)
T 1svv_A 357 ST 358 (359)
T ss_dssp --
T ss_pred cc
Confidence 54
No 43
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.94 E-value=5.1e-26 Score=224.83 Aligned_cols=302 Identities=14% Similarity=0.095 Sum_probs=206.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHH--H
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKA--A 189 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a--~ 189 (486)
..+..++++++++++| ++. .+++|+|||+|+..++.+++. +++.|+++..+|++...+ +
T Consensus 42 ~~~~~~l~~~la~~~g-~~~-------~v~~~~~gt~a~~~al~~~~~-----------~gd~vi~~~~~~~~~~~~~~~ 102 (356)
T 1v72_A 42 DELTAQVKRKFCEIFE-RDV-------EVFLVPTGTAANALCLSAMTP-----------PWGNIYCHPASHINNDECGAP 102 (356)
T ss_dssp SHHHHHHHHHHHHHHT-SCC-------EEEEESCHHHHHHHHHHTSCC-----------TTEEEEECTTSHHHHSSTTHH
T ss_pred chHHHHHHHHHHHHhC-CCC-------cEEEeCCccHHHHHHHHHhcC-----------CCCEEEEcCccchhhhhchHH
Confidence 4567788899999999 432 479999999999888877643 677888999999998776 7
Q ss_pred HHc--CCCCCCeEEEecCCCCCcccCHHHHHH-HHHHHH-HCCCccEEEEeecCCccccc---cCCchHHHHHHHHhCce
Q 038818 190 QIA--GIDPKNFRAIKTTKSSSFTLTPESLQA-AIDLDI-QAGLIPLFLCATVGTTAITT---VDPLGPLCDIAKRYSIW 262 (486)
Q Consensus 190 ~~~--G~g~~~v~~v~~d~~~~~~~d~~~L~~-~l~~~~-~~g~~p~~vv~~~gtt~~G~---idpl~~I~~i~~~~g~~ 262 (486)
..+ |. +++.+|.+ ++.+|+++|++ ++++.. ..+..+.+|+++.++ ++|. .+++++|+++|++||++
T Consensus 103 ~~~~~g~---~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~-~tG~~~~~~~l~~i~~~~~~~~~~ 175 (356)
T 1v72_A 103 EFFSNGA---KLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPACVSITQAT-EVGSIYTLDEIEAIGDVCKSSSLG 175 (356)
T ss_dssp HHHTTSC---EEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSC-TTSCCCCHHHHHHHHHHHHHTTCE
T ss_pred HHHhCCc---EEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCC-CCCccCCHHHHHHHHHHHHHcCCe
Confidence 777 88 89888875 46899999999 886421 122246678888765 4999 67799999999999999
Q ss_pred EEeeccccchhccCccchhhhcCC-CCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCC
Q 038818 263 VHVDAAYAGSACICPEFRHFIDGI-EGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDY 341 (486)
Q Consensus 263 lhvD~a~g~~~~~~~~~~~~~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 341 (486)
+|+|++|+.+............++ ..+|++++++||+ +.|.|+|+++.++ +...+.. ++.... +
T Consensus 176 li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g~~~~~~-~~~~~~~-----~~~~~~----~---- 240 (356)
T 1v72_A 176 LHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAAEAIVLFNT-SLATEMS-----YRRKRA----G---- 240 (356)
T ss_dssp EEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSCEEEEESSG-GGHHHHH-----HHHHHT----T----
T ss_pred EEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCccEEEEECH-HHHhhHH-----HHhhcc----C----
Confidence 999999975432111111111111 2689999999999 6687777887743 3332211 010000 0
Q ss_pred CCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCc
Q 038818 342 KDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKAN 421 (486)
Q Consensus 342 ~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~ 421 (486)
+. .......+...++.+..+.+.++.++..++++++.+.|++++++++..++..+.+.+.+.
T Consensus 241 ---~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~------------ 302 (356)
T 1v72_A 241 ---HL---SSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD------------ 302 (356)
T ss_dssp ---CC---CSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC------------
T ss_pred ---ch---hhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcC------------
Confidence 00 001112223344455445566778888999999999999988999876666666666552
Q ss_pred cchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 422 EGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 422 ~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
. ++.+.|.++|+.+..+. +. ..++|+++ ++.+++++++++++.|++++++.
T Consensus 303 ---~----~~~~~l~~~gi~v~~g~-~~-~~~iRi~~-~~~~~~~~i~~~~~~l~~~l~~~ 353 (356)
T 1v72_A 303 ---S----AMIDALLKAGFGFYHDR-WG-PNVVRFVT-SFATTAEDVDHLLNQVRLAADRT 353 (356)
T ss_dssp ---H----HHHHHHHHTTCBCBCSS-SS-TTEEEEEC-CTTCCHHHHHHHHHHHHHTC---
T ss_pred ---H----HHHHHHHhcCeEEeccc-cC-CCeEEEEe-cCCCCHHHHHHHHHHHHHHHHhh
Confidence 2 45666667787543222 22 56899997 56788899999999999887654
No 44
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.94 E-value=8.8e-26 Score=227.48 Aligned_cols=342 Identities=10% Similarity=0.053 Sum_probs=221.6
Q ss_pred CcceecCCCCCHHHHHHHHHHhhcCC----CccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHH
Q 038818 75 YYFAYFPSSGSIAGFLGEMLSSGFNV----VGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAI 150 (486)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~n~----~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~ 150 (486)
.|+++..+++.++.++ +.+...+.. ....|..++.......++++++++++|.+++ .+++|+|||+++
T Consensus 28 ~~ld~~~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~al 99 (406)
T 3cai_A 28 VHFDAPAGMLIPDSVA-TTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPG-------GVVLGADRAVLL 99 (406)
T ss_dssp EECBGGGCCCCCHHHH-HHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCGG-------GEEEESCHHHHH
T ss_pred EEEeCCCcCCCCHHHH-HHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCChHHHH
Confidence 4666654444444443 333333221 1123333444566777889999999998754 689999999888
Q ss_pred HHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH----cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHH
Q 038818 151 LCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI----AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQ 226 (486)
Q Consensus 151 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~----~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~ 226 (486)
..++.+.... . .+++.|+++..+|.++..++.. .|. +++.+|+++ +++.+|+++|+++|+++
T Consensus 100 ~~~~~~l~~~-~-------~~gd~vi~~~~~~~~~~~~~~~~~~~~g~---~v~~v~~~~-~~~~~d~~~l~~~l~~~-- 165 (406)
T 3cai_A 100 SLLAEASSSR-A-------GLGYEVIVSRLDDEANIAPWLRAAHRYGA---KVKWAEVDI-ETGELPTWQWESLISKS-- 165 (406)
T ss_dssp HHHHHHTGGG-G-------BTTCEEEEETTSCGGGTHHHHHHHHHHBC---EEEEECCCT-TTCCCCGGGHHHHCCTT--
T ss_pred HHHHHHHhhc-c-------CCCCEEEEcCCccHHHHHHHHHHHHhcCC---eEEEEecCc-ccCCcCHHHHHHHhCCC--
Confidence 7665543110 0 0566788899999886555443 688 999999873 25689999999988643
Q ss_pred CCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcc
Q 038818 227 AGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDC 306 (486)
Q Consensus 227 ~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~ 306 (486)
+.+|++++++|++|.+.|+++|.++|+++|+++|+|++|+.+....+ .... ++|+++.++||+++ |. +
T Consensus 166 ----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~-~~~~-----~~d~~~~s~~K~~g-~~-~ 233 (406)
T 3cai_A 166 ----TRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLD-IRET-----DADVVTVNAHAWGG-PP-I 233 (406)
T ss_dssp ----EEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCC-HHHH-----CCSEEEEEGGGGTS-CS-C
T ss_pred ----ceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCC-chhc-----CCCEEEeehhhhcC-CC-c
Confidence 45888999999999999999999999999999999999976544222 1211 58999999999875 65 7
Q ss_pred e-EEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccC-CCCCCc-hHHHHHHHHhchH--------------HH
Q 038818 307 C-CLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITL-SRRFRA-LKLWLVLRSFGVA--------------NL 369 (486)
Q Consensus 307 g-~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~-sr~~~~-l~~~~~l~~~g~~--------------g~ 369 (486)
| +++++++ ... .+.....+. .. . ....+.. +....+ .++..++..+... ++
T Consensus 234 G~~~~~~~~-~~~-~l~~~~~~~-~~-----~----~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~ 301 (406)
T 3cai_A 234 GAMVFRDPS-VMN-SFGSVSTNP-YA-----T----GPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSM 301 (406)
T ss_dssp EEEEESCHH-HHH-TSCCCCSCT-TC-----C----GGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHH
T ss_pred CeEEEEehH-HHh-hcCCcccCC-CC-----C----ccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhH
Confidence 8 7777643 322 221110000 00 0 0001111 111111 1223334433211 47
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCeEEecCC--CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeee-
Q 038818 370 RNFLRSHVRMAQLFQELVGGDNRFEIVAPR--NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHG- 446 (486)
Q Consensus 370 ~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~--~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~- 446 (486)
+++.++..++++++.+.|+++|++++..+. ..++++|.+.+.. ..++.+.|.+.|+.+..+.
T Consensus 302 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~L~~~gi~v~~g~~ 366 (406)
T 3cai_A 302 QSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIPVVSFAVHKVP---------------ADRVVQRLADNGILAIANTG 366 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCSEEEEEETTBC---------------HHHHHHHHHHTTEECEECCS
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCCEEEEEECCcC---------------HHHHHHHHHHCCcEEecCCh
Confidence 788889999999999999999899887543 3567777764211 2356666767787543322
Q ss_pred -----eE---CCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 447 -----MV---AGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 447 -----~~---~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
.+ .+..++|+++. ..++++|++++++.|+++
T Consensus 367 ~~~~~~~g~~~~~~~iRis~~-~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 367 SRVLDVLGVNDVGGAVTVGLA-HYSTMAEVDQLVRALASL 405 (406)
T ss_dssp CHHHHHHTTTTTTCCEEEECC-TTCCHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCCCCCCeEEEEee-cCCCHHHHHHHHHHHHHh
Confidence 01 12468999995 567888999999998763
No 45
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.94 E-value=3.5e-26 Score=228.90 Aligned_cols=315 Identities=11% Similarity=0.112 Sum_probs=214.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH----
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK---- 187 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~---- 187 (486)
.....++++.+++++|.+.+ .+++|+|||+|+..++.+.+-. ++..|+++..+|.+...
T Consensus 58 ~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~a~~~~~~~~~~~----------~gd~vl~~~~~~~~~~~~~~~ 120 (390)
T 1elu_A 58 QQLIAQLRQALAETFNVDPN-------TITITDNVTTGCDIVLWGLDWH----------QGDEILLTDCEHPGIIAIVQA 120 (390)
T ss_dssp HHHHHHHHHHHHHHTTSCGG-------GEEEESSHHHHHHHHHHHSCCC----------TTCEEEEETTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHH-------HEEEeCChHHHHHHHHhCCCCC----------CCCEEEEecCcccHHHHHHHH
Confidence 35566788899999998754 6899999999998887776311 56778889999988654
Q ss_pred HHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHH----HhCceE
Q 038818 188 AAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAK----RYSIWV 263 (486)
Q Consensus 188 a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~----~~g~~l 263 (486)
.++..|. +++.+|++...++.+|+++|+++|++. +.+|+++.++|++|.+.|+++|.++|+ +||+++
T Consensus 121 ~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~l 191 (390)
T 1elu_A 121 IAARFGI---TYRFFPVAATLNQGDAAAVLANHLGPK------TRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRV 191 (390)
T ss_dssp HHHHHCC---EEEEECCGGGSSSSCHHHHHHTTCCTT------EEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEE
T ss_pred HHHHhCc---EEEEEcCCCCCCccchHHHHHHhcCCC------ceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEE
Confidence 3677899 999999863235789999999988642 457889999999999999999999999 999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcC-CcccccCccCCCCCccCCC
Q 038818 264 HVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALST-NPEFLRNKASDSKQVVDYK 342 (486)
Q Consensus 264 hvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~ 342 (486)
++|++|+.+....+ +.. ...|+++.++|||+++|.++|+++++++-. . .+.. ..++-..........+.+.
T Consensus 192 i~Dea~~~g~~~~~-----~~~-~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~-~-~~~~~~~g~~~~~~~~~~~~~~~~ 263 (390)
T 1elu_A 192 LVDGAQSAGSLPLD-----FSR-LEVDYYAFTGHKWFAGPAGVGGLYIHGDCL-G-EINPTYVGWRSITYGAKGEPTGWA 263 (390)
T ss_dssp EEECTTTBTTBCCC-----TTT-SCCSEEEEESSSTTCCCTTCEEEEECTTTG-G-GCCCCSCCTTTEEECTTSCEEEEC
T ss_pred EEEcccccCCcCCC-----hhh-cCCCEEEccccccccCCCceEEEEECHHhH-h-hcCCccccCCcccccccCcccccc
Confidence 99999975433221 111 258999999999999999999999986422 1 1111 0000000000000000000
Q ss_pred C--ccccCCC-CC-CchHHHHHHHHhchHH-HHHHHHHHHHHHHHHHHHHhCCCCeEEecC--CCeeEEEEEeecCCCCC
Q 038818 343 D--WQITLSR-RF-RALKLWLVLRSFGVAN-LRNFLRSHVRMAQLFQELVGGDNRFEIVAP--RNFAVVCFRVLPSASGL 415 (486)
Q Consensus 343 ~--~~~~~sr-~~-~~l~~~~~l~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v~f~~~~~~~~~ 415 (486)
+ ..+..+. .. ...++..++..+...+ ++++.++..++++++.+.|++++++++..+ +..++++|.+....
T Consensus 264 ~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~--- 340 (390)
T 1elu_A 264 EGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSFTVDSPL--- 340 (390)
T ss_dssp SGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEEEECSSS---
T ss_pred cchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccEEEEEcCCCC---
Confidence 0 0111111 11 1133445555554444 888899999999999999999889998753 35678888764210
Q ss_pred CCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 416 GDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 416 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
+ ..++.+.|.++|+.+.... +..++|+++ +..++++|++++++.|+++
T Consensus 341 ---------~--~~~~~~~l~~~gi~v~~~~---~~~~iRis~-~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 341 ---------G--HRAIVQKLEEQRIYLRTIA---DPDCIRACC-HYITDEEEINHLLARLADF 388 (390)
T ss_dssp ---------C--HHHHHHHHHHTTEECEEET---TTTEEEEEC-CTTCCHHHHHHHHHHHTTC
T ss_pred ---------C--HHHHHHHHHHCCEEEEecC---CCCeEEEec-ccCCCHHHHHHHHHHHHhh
Confidence 0 2356677777787543322 346899998 4577888999999998764
No 46
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.94 E-value=5.9e-26 Score=227.41 Aligned_cols=330 Identities=12% Similarity=0.093 Sum_probs=223.8
Q ss_pred HHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcccc
Q 038818 89 FLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRE 168 (486)
Q Consensus 89 ~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~ 168 (486)
.+.+.+...+......|...+...++++.+.+|+.+.+|++... ...++|+|||+|+..++.+...
T Consensus 47 ~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-----~~v~~~~g~~~a~~~~~~~~~~--------- 112 (388)
T 1j32_A 47 HIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGA-----DNILVTNGGKQSIFNLMLAMIE--------- 112 (388)
T ss_dssp HHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEcCCHHHHHHHHHHHhcC---------
Confidence 34444444443333345555567899999999999999874321 2689999999999888777643
Q ss_pred CCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc--
Q 038818 169 NISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV-- 246 (486)
Q Consensus 169 ~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i-- 246 (486)
+++.|+++..+|+++..+++..|+ +++.+|.++++++.+|+++|++++++. +.+|+++.++|++|.+
T Consensus 113 --~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~ 181 (388)
T 1j32_A 113 --PGDEVIIPAPFWVSYPEMVKLAEG---TPVILPTTVETQFKVSPEQIRQAITPK------TKLLVFNTPSNPTGMVYT 181 (388)
T ss_dssp --TTCEEEEESSCCTHHHHHHHHTTC---EEEEECCCGGGTTCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCCC
T ss_pred --CCCEEEEcCCCChhHHHHHHHcCC---EEEEecCCcccCCCCCHHHHHHhcCcC------ceEEEEeCCCCCCCcCCC
Confidence 566788899999999999999999 999999875335789999999998642 4577888899999998
Q ss_pred -CCchHHHHHHHHhCceEEeeccccchhccCccchhhhc---CCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHh
Q 038818 247 -DPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFID---GIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKAL 321 (486)
Q Consensus 247 -dpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~---~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~ 321 (486)
+++++|+++|++||+++|+|++|+.+............ .....|.+..++||+++.| ..+|+++.+++ ... .+
T Consensus 182 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~-~~~-~l 259 (388)
T 1j32_A 182 PDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVP-LVK-AA 259 (388)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHH-HHH-HH
T ss_pred HHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCHH-HHH-HH
Confidence 45999999999999999999999875432111111110 0124788999999999633 34888887644 222 22
Q ss_pred cCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC
Q 038818 322 STNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR 399 (486)
Q Consensus 322 ~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 399 (486)
.....+. +.....+..++++..+ +.+.++++.++..++++++.+.|+++|++++..+
T Consensus 260 ~~~~~~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~- 318 (388)
T 1j32_A 260 TKIQGHS--------------------TSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLECPKP- 318 (388)
T ss_dssp HHHHHTT--------------------TCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCC-
T ss_pred HHHHhhc--------------------ccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCC-
Confidence 1100000 0011233334433333 4567888889999999999999999888887643
Q ss_pred CeeEEEE-EeecCCCCCCCCCCccchHHHHHHHHHHHHh-cCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 038818 400 NFAVVCF-RVLPSASGLGDGKANEGANELNRKLLESINA-SGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQE 477 (486)
Q Consensus 400 ~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~ 477 (486)
..+.+.+ .+.... ....++.+.+.+ .|+.+..+..+....++|+++. +++++|+++++.|++
T Consensus 319 ~~~~~~~~~~~~~~-------------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~---~~~~~i~~~~~~l~~ 382 (388)
T 1j32_A 319 DGAFYMFPSIAKTG-------------RSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYA---TDLDTIKRGMERLEK 382 (388)
T ss_dssp CBTTEECCBCGGGT-------------CCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC---SCHHHHHHHHHHHHH
T ss_pred CeeEEEEEecCCCC-------------CCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEec---CCHHHHHHHHHHHHH
Confidence 3343333 332100 012456666665 5875444333333468999984 578899999999999
Q ss_pred HHHHH
Q 038818 478 KLDGI 482 (486)
Q Consensus 478 ~~~~l 482 (486)
+++++
T Consensus 383 ~l~~~ 387 (388)
T 1j32_A 383 FLHGI 387 (388)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88765
No 47
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.94 E-value=1.6e-24 Score=219.91 Aligned_cols=301 Identities=13% Similarity=0.052 Sum_probs=209.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.....++++++++++|.+ ..+++++|++||..++.+... +++.|+++...|.++..+++.
T Consensus 108 ~~~~~~l~~~la~~~g~~---------~~i~~~sGs~a~~~al~~l~~-----------~gd~vl~~~~~h~~~~~~~~~ 167 (427)
T 2w8t_A 108 FHDHMEVEQALRDFYGTT---------GAIVFSTGYMANLGIISTLAG-----------KGEYVILDADSHASIYDGCQQ 167 (427)
T ss_dssp CHHHHHHHHHHHHHHTCS---------EEEEESCHHHHHHHHHHHHSC-----------TTCEEEEETTCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCC---------ceEEecCcHHHHHHHHHHhcC-----------CCCEEEECCcccHHHHHHHHH
Confidence 456667778889998875 357778888999877766432 567888899999999999999
Q ss_pred cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccc
Q 038818 192 AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAG 271 (486)
Q Consensus 192 ~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~ 271 (486)
.|. +++.+| .+|+++|+++|++... ..+.+|+++.+.|++|.+.|+++|+++|++||+++++|++|++
T Consensus 168 ~g~---~~~~~~-------~~d~~~le~~l~~~~~--~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~ 235 (427)
T 2w8t_A 168 GNA---EIVRFR-------HNSVEDLDKRLGRLPK--EPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSM 235 (427)
T ss_dssp SCS---EEEEEC-------TTCHHHHHHHHHTSCS--SSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTT
T ss_pred cCC---eeEEeC-------CCCHHHHHHHHHhccC--CCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccc
Confidence 998 888776 3599999999975311 1356888899999999999999999999999999999999987
Q ss_pred hhccCccchhhh--cCC-CCCCceeeccccccCCCCcceEEEeeCchHHHHHhcC-CcccccCccCCCCCccCCCCcccc
Q 038818 272 SACICPEFRHFI--DGI-EGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALST-NPEFLRNKASDSKQVVDYKDWQIT 347 (486)
Q Consensus 272 ~~~~~~~~~~~~--~~~-~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~~ 347 (486)
+.... ..+... .++ .++|+++.++||+++. .| |+++.+++ ... .+.. ..+|...
T Consensus 236 ~~~~~-~g~~~~~~~~~~~~~di~~~s~sK~~g~-~g-G~v~~~~~-l~~-~l~~~~~~~~~~----------------- 293 (427)
T 2w8t_A 236 GFFGP-NGRGVYEAQGLEGQIDFVVGTFSKSVGT-VG-GFVVSNHP-KFE-AVRLACRPYIFT----------------- 293 (427)
T ss_dssp TTSST-TSCCHHHHTTCTTCCSEEEEESSSTTCS-CC-EEEEECCT-TGG-GGGGTCHHHHSS-----------------
T ss_pred cccCC-CCCchHhhcCCCcCCcEEEecchhhhcc-CC-CEEEeCHH-HHH-HHHHhccccccc-----------------
Confidence 65431 111111 122 3679999999999984 34 77777643 222 2211 1122211
Q ss_pred CCCCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC-CeeEEEEEeecCCCCCCCCCCccchH
Q 038818 348 LSRRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR-NFAVVCFRVLPSASGLGDGKANEGAN 425 (486)
Q Consensus 348 ~sr~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~~~v~f~~~~~~~~~~~~~~~~~~~ 425 (486)
++-.. ...++..+++.+. .++++.++..++++++.+.|+++ ++++..++ ..+++.+.+.. .
T Consensus 294 ~~~~~~~~aa~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~--------------~ 356 (427)
T 2w8t_A 294 ASLPPSVVATATTSIRKLM--TAHEKRERLWSNARALHGGLKAM-GFRLGTETCDSAIVAVMLED--------------Q 356 (427)
T ss_dssp CCCCHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHHHHHHH-TCEESCSSCCSSEEEEEESS--------------H
T ss_pred CCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCCCEEEEEECC--------------H
Confidence 11111 1122233444332 24678888999999999999887 78876455 66777777642 2
Q ss_pred HHHHHHHHHHHhcCcEEEeeee---ECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 426 ELNRKLLESINASGQLYVSHGM---VAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 426 ~~~~~l~~~l~~~g~~~~~~~~---~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
....++.+.|.++|+.+..... ..+..++|+++. ..++++||+++++.|+++++++..
T Consensus 357 ~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRi~~~-~~~t~e~i~~~~~~l~~~l~~~~~ 417 (427)
T 2w8t_A 357 EQAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSIC-AEHTPAQIQTVLGMFQAAGRAVGV 417 (427)
T ss_dssp HHHHHHHHHHHHTTEECEEECTTTSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHCCeEEeeeCCCCCCCCCeEEEEEeC-CCCCHHHHHHHHHHHHHHHHHhCc
Confidence 3355778888888875333221 123578999985 567888999999999999887654
No 48
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.94 E-value=5e-26 Score=226.27 Aligned_cols=301 Identities=15% Similarity=0.113 Sum_probs=210.9
Q ss_pred HHHHHHHHHH-HHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH
Q 038818 112 TELENIVMDW-LGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ 190 (486)
Q Consensus 112 ~~le~~~~~~-l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 190 (486)
.....+++++ +++++|.+ .+++|+|||+|+..++.++.. +++.|+++..+|++...+++
T Consensus 52 ~~~~~~l~~~~la~~~~~~---------~v~~~~g~t~a~~~~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~ 111 (371)
T 2e7j_A 52 TPPIHDFIHNQLPKFLGCD---------VARVTNGAREAKFAVMHSLAK-----------KDAWVVMDENCHYSSYVAAE 111 (371)
T ss_dssp -CCHHHHHHTHHHHHTTSS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCC---------EEEEeCChHHHHHHHHHHHhC-----------CCCEEEEccCcchHHHHHHH
Confidence 3445667788 99999875 378999999999888887643 56788899999999999999
Q ss_pred HcCCCCCCeEEEe--cCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeecc
Q 038818 191 IAGIDPKNFRAIK--TTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAA 268 (486)
Q Consensus 191 ~~G~g~~~v~~v~--~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a 268 (486)
..|+ +++.+| +++ ++.+|+++|++++++...+ ..+.+|+++.++|++|.+.|+++|.++|++||+++|+|++
T Consensus 112 ~~g~---~~~~v~~~~~~--~~~~d~~~l~~~l~~~~~~-~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a 185 (371)
T 2e7j_A 112 RAGL---NIALVPKTDYP--DYAITPENFAQTIEETKKR-GEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGA 185 (371)
T ss_dssp HTTC---EEEEECCCCTT--TCCCCHHHHHHHHHHHTTT-SCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECT
T ss_pred HcCC---eEEEeecccCC--CCCcCHHHHHHHHHhhccc-CCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECc
Confidence 9999 999999 764 4799999999999864321 2356899999999999999999999999999999999999
Q ss_pred ccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcC-CcccccCccCCCCCccCCCCcccc
Q 038818 269 YAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALST-NPEFLRNKASDSKQVVDYKDWQIT 347 (486)
Q Consensus 269 ~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~~ 347 (486)
|+.+....+ .... +.|+++.++||++++|.++|+++++++.. ...+.. ..++... ....
T Consensus 186 ~~~~~~~~~-~~~~-----~~di~~~s~sK~~~~~~~~G~~~~~~~~~-~~~~~~~~~~~~~~-------------~~~~ 245 (371)
T 2e7j_A 186 YAIGRMPVS-LKEI-----GADFIVGSGHKSMAASGPIGVMGMKEEWA-EIVLRRSEKYKNKE-------------VELL 245 (371)
T ss_dssp TTBTTBCCC-HHHH-----TCSEEEEEHHHHSSCCSSCEEEEECTTTT-TTTTCBCSSCTTSB-------------GGGT
T ss_pred cccCCCCCC-hhhc-----CCCEEEecCCcCCCCCCCcEEEEEechhh-hhhccccccCcccc-------------cccc
Confidence 987654221 1111 57899999999999988999999986521 110111 0001100 0000
Q ss_pred CCCCCCch---HHHHHHHHhchHHHHHHHHHH--HHHHHHHHHHHhCCCCeEEecCC--CeeEEEEEeecCCCCCCCCCC
Q 038818 348 LSRRFRAL---KLWLVLRSFGVANLRNFLRSH--VRMAQLFQELVGGDNRFEIVAPR--NFAVVCFRVLPSASGLGDGKA 420 (486)
Q Consensus 348 ~sr~~~~l---~~~~~l~~~g~~g~~~~~~~~--~~~a~~l~~~L~~~~~~~~~~~~--~~~~v~f~~~~~~~~~~~~~~ 420 (486)
.+ ..... ++..+++.+.. ++.++. .++++++.+.|+++ ++++..++ ..+++++.+. .
T Consensus 246 ~~-~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~-~--------- 309 (371)
T 2e7j_A 246 GC-TARGATIITLMASFPHVRE----RIKRWDEEVEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFHAE-V--------- 309 (371)
T ss_dssp TC-CCCSHHHHHHHHHHHHHHH----HGGGHHHHHHHHHHHHHHHHHT-TCEEESSSSCCSSEEEEECH-H---------
T ss_pred cC-CcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCccCceEEEECC-C---------
Confidence 11 11122 22233333211 566677 88999999999988 89887654 4567777653 1
Q ss_pred ccchHHHHHHHHHHHHhcCcEEEeeeeE-C---C--EeEEE-EEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 421 NEGANELNRKLLESINASGQLYVSHGMV-A---G--IYFIR-FAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 421 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~---~--~~~lR-~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
..++.+.|.+.|+.+ .+... . + ..++| +++....+++++++++++.|+++++++
T Consensus 310 -------~~~~~~~l~~~gi~~-~~~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 310 -------LYEISKKAKGGRFFL-YRELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKY 370 (371)
T ss_dssp -------HHHHHHHSSSGGGHH-HHHHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred -------HHHHHHHHHHCCEEE-EeccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHhc
Confidence 235666666667642 22110 0 2 46799 998532278889999999999988754
No 49
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.93 E-value=6.6e-26 Score=223.88 Aligned_cols=339 Identities=13% Similarity=0.037 Sum_probs=220.0
Q ss_pred CCCCHHHHHHHHHHhhc---CCCccc---cccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEE-cCCchHHHHHHH
Q 038818 82 SSGSIAGFLGEMLSSGF---NVVGFN---WMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVI-QGTTCEAILCTL 154 (486)
Q Consensus 82 ~~~~~~~~~~~~l~~~~---n~~~~~---~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~-t~ggt~a~~~al 154 (486)
+.+.++.++..+...+. +++... ...++.+.++-.++++.+++++|.++.. ..+| |+|||+++..++
T Consensus 21 ~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~------evif~t~~~T~a~n~a~ 94 (377)
T 3e77_A 21 QSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNY------KVIFLQGGGCGQFSAVP 94 (377)
T ss_dssp SCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTE------EEEEESSHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCC------eEEEEcCchHHHHHHHH
Confidence 34555555554444332 221111 2235667788889999999999997642 5777 689999987776
Q ss_pred HHHHHHHHHHccccCCCCeEEEecCCCchHH--HHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccE
Q 038818 155 AAARDQILNEIGRENISRLVVYGSDQTHSAL--QKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPL 232 (486)
Q Consensus 155 ~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~--~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~ 232 (486)
...... .+++.+++....|++. .+.++..|. .++.+|++. ++..+++.++.++++++ .
T Consensus 95 ~~l~~~---------~~Gd~v~~~~~g~~~~~~~~~a~~~G~---~~~~~~~~~--~~~~~~~~~~~~i~~~t------~ 154 (377)
T 3e77_A 95 LNLIGL---------KAGRCADYVVTGAWSAKAAEEAKKFGT---INIVHPKLG--SYTKIPDPSTWNLNPDA------S 154 (377)
T ss_dssp HHHGGG---------STTCEEEECCCSHHHHHHHHHHTTTSE---EEECSCCCS--SSCSCCCGGGCCCCTTC------S
T ss_pred HhccCC---------CCCCeEEEEECCHHHHHHHHHHHHhCC---ceEEeccCC--CcCCCCChHHhccCCCc------c
Confidence 654321 0245565666777763 334445566 677778764 34667777766665443 3
Q ss_pred EEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEee
Q 038818 233 FLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVK 312 (486)
Q Consensus 233 ~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~ 312 (486)
+|.+++.+|.+|.+.|+ +|+++|+++|||++++.+....+- ...|.+++++|||+ +|.|+|++++|
T Consensus 155 lV~~~h~et~tG~~~pi-----i~~~~~~~~~vD~~q~~g~~~id~--------~~~~~~~~s~~K~~-gp~G~g~l~~~ 220 (377)
T 3e77_A 155 YVYYCANETVHGVEFDF-----IPDVKGAVLVCDMSSNFLSKPVDV--------SKFGVIFAGAQKNV-GSAGVTVVIVR 220 (377)
T ss_dssp CEEEESEETTTTEECSS-----CCCCTTCCEEEECTTTTTSSCCCG--------GGCSEEEEEGGGTT-SCTTCEEEEEE
T ss_pred EEEEeCccCchheEchh-----hhccCCCEEEEEcccccCCCCCch--------hhcCEEEEeccccc-CCCccEEEEEc
Confidence 78899999999999999 588999999999999887765542 13446899999999 59999999999
Q ss_pred CchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC-CCchHHHHHHHHhchH-HHHHHHHHHHHHHHHHHHHHhCC
Q 038818 313 NPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR-FRALKLWLVLRSFGVA-NLRNFLRSHVRMAQLFQELVGGD 390 (486)
Q Consensus 313 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~ 390 (486)
++.. .+.-...+.|+...... .......+-. +...++-.+++.+-.+ |++++.++..++++++++.|+++
T Consensus 221 ~~~l-~~~~~~~p~~~~~~~~~-------~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~ 292 (377)
T 3e77_A 221 DDLL-GFALRECPSVLEYKVQA-------GNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNS 292 (377)
T ss_dssp TTSC-SCCCTTSCGGGCHHHHH-------TTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHH-hhccCCCCchhhHHHHh-------hcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhc
Confidence 7643 11111122232100000 0000001111 1224555667766666 89999999999999999999999
Q ss_pred CCeEEecC-C--Cee-EEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHH
Q 038818 391 NRFEIVAP-R--NFA-VVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDR 466 (486)
Q Consensus 391 ~~~~~~~~-~--~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~ 466 (486)
|++++... + .++ +++|.+.+... . .++...+.+.+.++|+....+ ....+.+|+|++ ..+|++
T Consensus 293 ~g~~~~~~~~~~rs~~ivsf~~~~~~~-------~---~~~~~~~l~~l~~~Gi~~~~g--~~~~g~iRiS~~-~~~t~e 359 (377)
T 3e77_A 293 QGFYVCPVEPQNRSKMNIPFRIGNAKG-------D---DALEKRFLDKALELNMLSLKG--HRSVGGIRASLY-NAVTIE 359 (377)
T ss_dssp TTSEECCSCGGGBCSSEEEEEESSTTC-------C---HHHHHHHHHHHHHTTEESCBC--CTTTCSEEEECC-TTSCHH
T ss_pred CCceecCCCHHHcCCcEEEEEcCCCCC-------c---hhHHHHHHHHHHHCCcEEeCC--CCcCCEEEEECC-CCCCHH
Confidence 99986431 1 334 68999875310 0 223345666676778743222 122346999996 477888
Q ss_pred HHHHHHHHHHHHHHH
Q 038818 467 HVIAAWKVVQEKLDG 481 (486)
Q Consensus 467 did~~i~~l~~~~~~ 481 (486)
|||+++++|+++.++
T Consensus 360 dId~l~~al~~~~~~ 374 (377)
T 3e77_A 360 DVQKLAAFMKKFLEM 374 (377)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998764
No 50
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.93 E-value=6.6e-25 Score=221.23 Aligned_cols=329 Identities=10% Similarity=0.049 Sum_probs=221.6
Q ss_pred HHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccC
Q 038818 90 LGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGREN 169 (486)
Q Consensus 90 ~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~ 169 (486)
+.+.+...+......|...+...++++.+.+|+.+.+|++.+. ..+++|+|||+|+..++.++..
T Consensus 59 v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~-----~~v~~t~g~~~al~~~~~~l~~---------- 123 (406)
T 1xi9_A 59 MKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITP-----DDVRVTAAVTEALQLIFGALLD---------- 123 (406)
T ss_dssp HHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHCC----------
T ss_pred HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCH-----HHEEEcCChHHHHHHHHHHhCC----------
Confidence 3444444443222345544556899999999999988765331 3789999999999888776632
Q ss_pred CCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC-
Q 038818 170 ISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP- 248 (486)
Q Consensus 170 ~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp- 248 (486)
+++.|+++..+|.++..+++..|+ +++.+|+++++.+.+|+++|++++++. +.+|+++.++|++|.+-|
T Consensus 124 -~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~~ 193 (406)
T 1xi9_A 124 -PGDEILVPGPSYPPYTGLVKFYGG---KPVEYRTIEEEDWQPDIDDIRKKITDR------TKAIAVINPNNPTGALYDK 193 (406)
T ss_dssp -TTCEEEEEESCCHHHHHHHHHTTC---EEEEEEEEGGGTSEECHHHHHHHCCTT------EEEEEEESSCTTTCCCCCH
T ss_pred -CCCEEEEcCCCCccHHHHHHHcCC---EEEEeecCCCcCCcCCHHHHHHhhCcC------ceEEEEECCCCCCCCCcCH
Confidence 567788899999999999999999 999999875334689999999988642 456778889999999865
Q ss_pred --chHHHHHHHHhCceEEeeccccchhccCccchhhhcCC-CCC-CceeeccccccCCC-CcceEEE--eeCc---hHHH
Q 038818 249 --LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGI-EGA-DSFSLNAHKWFFTT-LDCCCLW--VKNP---NALI 318 (486)
Q Consensus 249 --l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~-~~a-Dsi~~~~hK~l~~p-~~~g~~~--~~~~---~~~~ 318 (486)
+++|+++|++||+++++|++|+++.. ...... +..+ ... |.++.++||+++.| ..+|+++ .++. +...
T Consensus 194 ~~l~~i~~~a~~~~~~li~De~~~~~~~-~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l~~ 271 (406)
T 1xi9_A 194 KTLEEILNIAGEYEIPVISDEIYDLMTY-EGEHIS-PGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVRE 271 (406)
T ss_dssp HHHHHHHHHHHHHTCCEEEECTTTTCBS-SSCCCC-HHHHCSSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCC-HHHcCCCceEEEEeccccccCCCccEEEEEEEecCchhHHHHHH
Confidence 99999999999999999999987543 211111 1111 244 67888999999733 3478888 4431 3332
Q ss_pred HHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe
Q 038818 319 KALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIV 396 (486)
Q Consensus 319 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 396 (486)
.+.....+.. ....+..+++...+ +.++++++.++..++++++.+.|+++|++++.
T Consensus 272 -~l~~~~~~~~---------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 329 (406)
T 1xi9_A 272 -AIDRLARIRL---------------------CPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGISTT 329 (406)
T ss_dssp -HHHHHHHHTC---------------------CSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTSTTEECC
T ss_pred -HHHHHHHhhc---------------------CCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCeee
Confidence 2211000000 01222333333333 45667888899999999999999998888876
Q ss_pred cCCCeeEEEE-EeecC-CCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHH
Q 038818 397 APRNFAVVCF-RVLPS-ASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAA 471 (486)
Q Consensus 397 ~~~~~~~v~f-~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~ 471 (486)
. +..+.++| .+... . . + ..++.+.+. +.|+.+..+..+. +..++|+++. +++++|+++
T Consensus 330 ~-~~~~~~~~~~~~~~~~---------~--~--~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~---~~~~~i~~~ 392 (406)
T 1xi9_A 330 K-PQGAFYIFPKIEVGPW---------K--N--DKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL---PPIEILEEA 392 (406)
T ss_dssp C-CCBSSEECCEECSCSC---------S--S--HHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC---SCHHHHHHH
T ss_pred c-CCeeEEEEEecCccCC---------C--C--HHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec---CCHHHHHHH
Confidence 4 44454444 44320 0 0 1 235666665 6787544333222 2568999984 688899999
Q ss_pred HHHHHHHHHHHhh
Q 038818 472 WKVVQEKLDGILA 484 (486)
Q Consensus 472 i~~l~~~~~~l~~ 484 (486)
++.|.++++++.+
T Consensus 393 ~~~l~~~l~~~~~ 405 (406)
T 1xi9_A 393 MDRFEKFMKERLK 405 (406)
T ss_dssp HHHHHHHHHHC--
T ss_pred HHHHHHHHHHHhc
Confidence 9999999887654
No 51
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.93 E-value=1.7e-24 Score=217.44 Aligned_cols=300 Identities=12% Similarity=0.074 Sum_probs=213.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.....++++++++++|.+. .+++++||+|+..++.+... +++.|+++..+|.++..+++.
T Consensus 87 ~~~~~~l~~~la~~~~~~~---------~i~~~sGt~a~~~~l~~~~~-----------~gd~v~~~~~~~~~~~~~~~~ 146 (399)
T 3tqx_A 87 QTIHKELEKDISEFLGTDD---------TILYSSCFDANGGLFETLLG-----------PEDAIISDELNHASIIDGIRL 146 (399)
T ss_dssp BHHHHHHHHHHHHHHTCSE---------EEEESCHHHHHHTTHHHHCC-----------TTCEEEEETTCCHHHHHHHHS
T ss_pred chHHHHHHHHHHHHHCCCc---------EEEECchHHHHHHHHHHhcC-----------CCCEEEECCcccHHHHHHHHH
Confidence 4556677788999998753 45666678898877765432 677888999999999999999
Q ss_pred cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccc
Q 038818 192 AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAG 271 (486)
Q Consensus 192 ~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~ 271 (486)
.|. +++.+|. +|+++|++++++....+..+.+|+++.++|++|.+.|+++|.++|++||+++|+|++|+.
T Consensus 147 ~g~---~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~ 216 (399)
T 3tqx_A 147 CKA---QRYRYKN-------NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAV 216 (399)
T ss_dssp CCS---EEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTT
T ss_pred cCC---ceeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccc
Confidence 999 8888874 477899999988765555677899999999999999999999999999999999999964
Q ss_pred hhccCccchh--hhcC-CCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccC
Q 038818 272 SACICPEFRH--FIDG-IEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITL 348 (486)
Q Consensus 272 ~~~~~~~~~~--~~~~-~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 348 (486)
++... ..+. ...+ ....|.++.++||+++++.| |+++.++ ............|...
T Consensus 217 ~~~~~-~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~~~~-~~~~~~~~~~~~~~~~------------------ 275 (399)
T 3tqx_A 217 GFIGE-NGRGTPEYCGVADRVDILTGTLGKALGGASG-GYTSGHK-EIIEWLRNRSRPYLFS------------------ 275 (399)
T ss_dssp TTSST-TSCCHHHHHTCTTCCSEEEEESSSSSCSSCC-EEEEECH-HHHHHHHHHCHHHHSS------------------
T ss_pred cccCC-CCCchHHhhCCCCCCcEEEecchHhcccCce-EEEEcCH-HHHHHHHHhCcceecc------------------
Confidence 33221 1111 1112 24679999999999995544 7766654 3333222212222211
Q ss_pred CCCCCchHH---HHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchH
Q 038818 349 SRRFRALKL---WLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGAN 425 (486)
Q Consensus 349 sr~~~~l~~---~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~ 425 (486)
.....+.+ ..++.... ++.+++.++..++++++.+.|+++ ++++. ++..+++.+.+.. .
T Consensus 276 -~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~--------------~ 337 (399)
T 3tqx_A 276 -NTVAPVIVATSLKVLELLK-TEGPQLRKQLQENSRYFRAGMEKL-GFQLV-PGNHPIIPVMLGD--------------A 337 (399)
T ss_dssp -CCCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCSSSEEEEEEEC--------------H
T ss_pred -CCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEeCC--------------H
Confidence 01122222 33333322 567888899999999999999887 77765 5666777777653 2
Q ss_pred HHHHHHHHHHHhcCcEEEeeee----ECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 426 ELNRKLLESINASGQLYVSHGM----VAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 426 ~~~~~l~~~l~~~g~~~~~~~~----~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
....++.+.|.++|+.+ .+.. ..+..++|+++. ..+++++++++++.|+++++++
T Consensus 338 ~~~~~~~~~l~~~gi~v-~~~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 338 QLATNMADHLLQEGIYV-VGFSYPVVPMGKARIRVQMS-AVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp HHHHHHHHHHHHTTEEC-CEECTTTSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCEE-eeeCCCCCCCCCceEEEEee-cCCCHHHHHHHHHHHHHHHHHh
Confidence 33457788888888753 3332 234679999984 5778889999999999998765
No 52
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.93 E-value=1.5e-24 Score=219.23 Aligned_cols=311 Identities=16% Similarity=0.157 Sum_probs=206.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCC-eEEEecCCCchHHHHHH--
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISR-LVVYGSDQTHSALQKAA-- 189 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~a~-- 189 (486)
....++++++++++|.+.+ .+++|+|||+++..++.+++...... .++ .+|+++...|.++..++
T Consensus 71 ~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~al~~al~~~~~~~~~~-----~~gd~vii~~~~~~~~~~~~~~~ 138 (416)
T 1qz9_A 71 DLSERLGNRLATLIGARDG-------EVVVTDTTSINLFKVLSAALRVQATR-----SPERRVIVTETSNFPTDLYIAEG 138 (416)
T ss_dssp GHHHHHHHHHHTTTTCCTT-------SEEECSCHHHHHHHHHHHHHHHHHHH-----STTCCEEEEETTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCcc-------cEEEeCChhHHHHHHHHhhccccccc-----CCCCcEEEEcCCCCCchHHHHHH
Confidence 4556788999999998754 68899999988877777665210000 033 36777878998866543
Q ss_pred --HHc--CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEe
Q 038818 190 --QIA--GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHV 265 (486)
Q Consensus 190 --~~~--G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhv 265 (486)
+.. |+ +++.+|+ +++|+++|++ .+.+|++++++|++|.+.|+++|.++|++||+++|+
T Consensus 139 ~~~~~~~g~---~~~~v~~---------~~~l~~~i~~------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~ 200 (416)
T 1qz9_A 139 LADMLQQGY---TLRLVDS---------PEELPQAIDQ------DTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIW 200 (416)
T ss_dssp HHHHHCSSC---EEEEESS---------GGGHHHHCST------TEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEE
T ss_pred HHHHhcCCc---eEEEeCc---------HHHHHHHhCC------CceEEEEeccccCcccccCHHHHHHHHHHcCCEEEE
Confidence 334 88 8888874 5678887753 256899999999999999999999999999999999
Q ss_pred eccccchhccCccchhhhcCCCCCCceeeccccccCCCCcc-eEEEeeCchHHHHHhc-CCcccccCcc-CCCCCccCCC
Q 038818 266 DAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDC-CCLWVKNPNALIKALS-TNPEFLRNKA-SDSKQVVDYK 342 (486)
Q Consensus 266 D~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~-g~~~~~~~~~~~~~~~-~~~~y~~~~~-~~~~~~~~~~ 342 (486)
|++|+.+....+ .... ++|++++++||+++++.++ |+++++++.. . .+. ...+|..... .+......+.
T Consensus 201 D~a~~~g~~~~~-~~~~-----~~d~~~~s~~K~l~~g~~~~g~l~~~~~~~-~-~l~~~~~g~~g~~~~~~~~~~~~~~ 272 (416)
T 1qz9_A 201 DLAHSAGAVPVD-LHQA-----GADYAIGCTYKYLNGGPGSQAFVWVSPQLC-D-LVPQPLSGWFGHSRQFAMEPRYEPS 272 (416)
T ss_dssp ECTTTTTTSCCC-HHHH-----TCSEEEECSSSTTCCCTTCCCEEEECTTTT-T-TSCCSCCCGGGBCTTSCCCSSCCBC
T ss_pred EccccccCcCCC-hhhc-----CCCEEEecCcccCCCCCCCeEEEEECHHHH-h-ccCCCccccCccccccCCCCccCCC
Confidence 999975443221 1111 5899999999999877777 9999876532 1 111 1111111000 0000000000
Q ss_pred --CccccCC-CCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC-C--CeEEecCC----CeeEEEEEeecC
Q 038818 343 --DWQITLS-RRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGD-N--RFEIVAPR----NFAVVCFRVLPS 411 (486)
Q Consensus 343 --~~~~~~s-r~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-~--~~~~~~~~----~~~~v~f~~~~~ 411 (486)
......+ ... ...++..+++.+..++++++.++..++++++.+.|+++ | ++++..++ ..++++|.+..
T Consensus 273 ~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~- 351 (416)
T 1qz9_A 273 NGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPE- 351 (416)
T ss_dssp SSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTT-
T ss_pred cchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCC-
Confidence 0011111 111 11344456666655678889999999999999999885 6 88887553 35667776531
Q ss_pred CCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 412 ASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
...+.+.|.++|+. +. ..+..++|+++.++.++++|++++++.|++++++.
T Consensus 352 ----------------~~~l~~~l~~~gi~-~~---~~~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~~ 402 (416)
T 1qz9_A 352 ----------------GYAVIQALIDRGVI-GD---YREPRIMRFGFTPLYTTFTEVWDAVQILGEILDRK 402 (416)
T ss_dssp ----------------HHHHHHHHHTTTEE-CE---EETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHHT
T ss_pred ----------------HHHHHHHHHhCCcE-ec---cCCCCeEEEeCcccCCCHHHHHHHHHHHHHHHhcc
Confidence 24567777778864 22 22456899998645788999999999999988654
No 53
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.93 E-value=8e-25 Score=219.16 Aligned_cols=326 Identities=10% Similarity=0.062 Sum_probs=221.2
Q ss_pred HHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccc
Q 038818 88 GFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGR 167 (486)
Q Consensus 88 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 167 (486)
..+.+.+...+......|.. ...++++++.+++++++|.+... ...++|+|||+|+..++.+...
T Consensus 48 ~~v~~a~~~~~~~~~~~y~~--~~~~~~~~l~~~l~~~~g~~~~~-----~~v~~~~g~~~a~~~~~~~~~~-------- 112 (391)
T 4dq6_A 48 PCIIDSLKNRLEQEIYGYTT--RPDSYNESIVNWLYRRHNWKIKS-----EWLIYSPGVIPAISLLINELTK-------- 112 (391)
T ss_dssp HHHHHHHHHHHTTCCCCCBC--CCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESCHHHHHHHHHHHHSC--------
T ss_pred HHHHHHHHHHHhCCCCCCCC--CCHHHHHHHHHHHHHHhCCCCcH-----HHeEEcCChHHHHHHHHHHhCC--------
Confidence 33445555555543334433 34789999999999999943221 2789999999999888776643
Q ss_pred cCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecC--CCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 168 ENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTT--KSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 168 ~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d--~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
++..|+++..+|.++..+++..|. +++.+|++ .++++.+|+++|++++++ +.+|+++.++|++|.
T Consensus 113 ---~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~v~i~~p~nptG~ 179 (391)
T 4dq6_A 113 ---ANDKIMIQEPVYSPFNSVVKNNNR---ELIISPLQKLENGNYIMDYEDIENKIKD-------VKLFILCNPHNPVGR 179 (391)
T ss_dssp ---TTCEEEECSSCCTHHHHHHHHTTC---EEEECCCEECTTSCEECCHHHHHHHCTT-------EEEEEEESSBTTTTB
T ss_pred ---CCCEEEEcCCCCHHHHHHHHHcCC---eEEeeeeeecCCCceEeeHHHHHHHhhc-------CCEEEEECCCCCCCc
Confidence 567788999999999999999999 99999987 445678999999999875 347888899999999
Q ss_pred c---CCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCC----CCCCceeeccccccC-CCCcceEEEeeCchHH
Q 038818 246 V---DPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGI----EGADSFSLNAHKWFF-TTLDCCCLWVKNPNAL 317 (486)
Q Consensus 246 i---dpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~----~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~ 317 (486)
+ +++++|+++|++||+++++|++|+.+......... +..+ .....+..++||+++ ....+|+++++++...
T Consensus 180 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~ 258 (391)
T 4dq6_A 180 VWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIP-MASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDY 258 (391)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccC-HHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHH
Confidence 9 77999999999999999999999764432111111 1111 022366788999997 4457888888775443
Q ss_pred HHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhC-CCCeE
Q 038818 318 IKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGG-DNRFE 394 (486)
Q Consensus 318 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~ 394 (486)
.........+.. .....+...++...+ +.+.++++.++..++++++.+.|++ +|+++
T Consensus 259 ~~~~~~~~~~~~--------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 318 (391)
T 4dq6_A 259 KLLDDAFTRIDI--------------------KRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPKLK 318 (391)
T ss_dssp HHHHHHHHHTTC--------------------CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSE
T ss_pred HHHHHHHHhhcC--------------------CCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhCCCCE
Confidence 221110000000 011222223322222 3456788888999999999999987 78998
Q ss_pred EecCCCeeEEE-EEeecCCCCCCCCCCccchHHHHHHHHHHHHhc-CcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHH
Q 038818 395 IVAPRNFAVVC-FRVLPSASGLGDGKANEGANELNRKLLESINAS-GQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIA 470 (486)
Q Consensus 395 ~~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~ 470 (486)
+..+ ..+.+. +.+.... ....++.+.|.++ |+.+.++..+. +..++|++++ +++++|++
T Consensus 319 ~~~~-~~~~~~~~~~~~~~-------------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~i~~ 381 (391)
T 4dq6_A 319 VRKP-EGTYLLWVDFSALG-------------LSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLA---CPRSMLEE 381 (391)
T ss_dssp ECCC-SBSSEEEEECGGGC-------------CCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC---SCHHHHHH
T ss_pred ecCC-CccEEEEEEhhhcC-------------CCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc---CCHHHHHH
Confidence 8744 444444 5554311 0134667777777 87544333222 3578999985 57789999
Q ss_pred HHHHHHHHH
Q 038818 471 AWKVVQEKL 479 (486)
Q Consensus 471 ~i~~l~~~~ 479 (486)
+++.|++++
T Consensus 382 ~l~~l~~~l 390 (391)
T 4dq6_A 382 ALIRIKNAI 390 (391)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998865
No 54
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.93 E-value=3.9e-25 Score=223.18 Aligned_cols=327 Identities=13% Similarity=0.075 Sum_probs=225.4
Q ss_pred HHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcccc
Q 038818 89 FLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRE 168 (486)
Q Consensus 89 ~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~ 168 (486)
.+.+.+ ..+......|...+...++++.+.+++.+.+|++... ..+++|+|||+|+..++.+...
T Consensus 60 ~v~~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-----~~v~~~~g~t~a~~~~~~~~~~--------- 124 (409)
T 2gb3_A 60 VFFERI-YENKPEVVYYSHSAGIWELREAFASYYKRRQRVDVKP-----ENVLVTNGGSEAILFSFAVIAN--------- 124 (409)
T ss_dssp HHHHHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCG-----GGEEEESHHHHHHHHHHHHHCC---------
T ss_pred HHHHHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCH-----HHEEEeCCHHHHHHHHHHHhCC---------
Confidence 345555 5554433455555567899999999999988865321 2789999999999888877632
Q ss_pred CCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC-
Q 038818 169 NISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD- 247 (486)
Q Consensus 169 ~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id- 247 (486)
+++.|+++..+|.++..+++..|. +++.+|+++++++.+ +++|++++++. +.+|+++.++|++|.+-
T Consensus 125 --~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~-~~~l~~~l~~~------~~~v~~~~p~nptG~~~~ 192 (409)
T 2gb3_A 125 --PGDEILVLEPFYANYNAFAKIAGV---KLIPVTRRMEEGFAI-PQNLESFINER------TKGIVLSNPCNPTGVVYG 192 (409)
T ss_dssp --TTCEEEEEESCCTHHHHHHHHHTC---EEEEEECCGGGTSCC-CTTGGGGCCTT------EEEEEEESSCTTTCCCCC
T ss_pred --CCCEEEEcCCCchhHHHHHHHcCC---EEEEeccCCCCCCcc-HHHHHHhhCcC------CeEEEECCCCCCCCCCcC
Confidence 567788899999999999999999 999999875233455 88898887642 45778889999999984
Q ss_pred --CchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCC
Q 038818 248 --PLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTN 324 (486)
Q Consensus 248 --pl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~ 324 (486)
++++|+++|++||+++++|++|+++.... .....+.++...|.++.++||+++.| ..+|++++++++.........
T Consensus 193 ~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l~~~~ 271 (409)
T 2gb3_A 193 KDEMRYLVEIAERHGLFLIVDEVYSEIVFRG-EFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMKLA 271 (409)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECcccccccCC-CCCCccccCCCCEEEEecchhccCCccceEEEEEECcHHHHHHHHHHH
Confidence 58999999999999999999998754321 11121334446789999999999743 348998887733332211100
Q ss_pred cccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCee
Q 038818 325 PEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFA 402 (486)
Q Consensus 325 ~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~ 402 (486)
..+ + ....+..+++...+ +.++++++.++..++++++.+.|+++ +++++..+..+
T Consensus 272 ~~~-----------------~-----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 328 (409)
T 2gb3_A 272 QGR-----------------L-----APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEH-GLKRFTKPSGA 328 (409)
T ss_dssp HHS-----------------C-----CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCCCSBS
T ss_pred hcc-----------------C-----CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHc-CceeeeCCCee
Confidence 000 0 11223333333443 56778888899999999999999987 78772234444
Q ss_pred EEEE-EeecCCCCCCCCCCccchHHHHHHHHHHHHhc------CcEEEeeeeE-----CCEeEEEEEecCCCCcHHHHHH
Q 038818 403 VVCF-RVLPSASGLGDGKANEGANELNRKLLESINAS------GQLYVSHGMV-----AGIYFIRFAVGATLTEDRHVIA 470 (486)
Q Consensus 403 ~v~f-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------g~~~~~~~~~-----~~~~~lR~~~~~~~tt~~did~ 470 (486)
.+.+ .+.+. + ..++.+.|.++ |+.+..+..+ .+..++|+++. +++++|++
T Consensus 329 ~~~~~~~~~~-------------~--~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~---~~~e~i~~ 390 (409)
T 2gb3_A 329 FYITAELPVE-------------D--AEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV---LEKDLLSR 390 (409)
T ss_dssp SEEEEECSSS-------------C--HHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC---SCHHHHHH
T ss_pred EEEEEEeCCC-------------C--HHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC---CCHHHHHH
Confidence 4443 44311 1 24566677665 7654333222 13578999984 68889999
Q ss_pred HHHHHHHHHHHHhh
Q 038818 471 AWKVVQEKLDGILA 484 (486)
Q Consensus 471 ~i~~l~~~~~~l~~ 484 (486)
+++.|+++++++.+
T Consensus 391 ~~~~l~~~l~~~~~ 404 (409)
T 2gb3_A 391 AIDVLMEGLKMFCS 404 (409)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999887654
No 55
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.93 E-value=3.5e-25 Score=223.09 Aligned_cols=318 Identities=11% Similarity=0.059 Sum_probs=216.5
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCch
Q 038818 104 NWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHS 183 (486)
Q Consensus 104 ~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~ 183 (486)
.|...+...++.+++.+++++.+|.+... ....++|+|||+|+..++.+... +++.|+++..+|.
T Consensus 73 ~y~~~~g~~~l~~~l~~~l~~~~g~~~~~----~~~i~~~~g~~~a~~~~~~~l~~-----------~gd~vl~~~~~~~ 137 (407)
T 3nra_A 73 AYTEYRGDLGIRDLLAPRLAAFTGAPVDA----RDGLIITPGTQGALFLAVAATVA-----------RGDKVAIVQPDYF 137 (407)
T ss_dssp HSCCTTCCHHHHHHHHHHHHHHHTSCCCT----TTSEEEESHHHHHHHHHHHTTCC-----------TTCEEEEEESCCT
T ss_pred CcCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCCcHHHHHHHHHHhCC-----------CCCEEEEcCCccc
Confidence 35455567889999999999999985310 01689999999999887766532 5677888999999
Q ss_pred HHHHHHHHcCCCCCCeEEEecCC----CCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHH
Q 038818 184 ALQKAAQIAGIDPKNFRAIKTTK----SSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIA 256 (486)
Q Consensus 184 s~~~a~~~~G~g~~~v~~v~~d~----~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~ 256 (486)
++..+++..|. +++.+|++. ++++.+|+++|++++++. +.+|+++.++|++|.+-| +++|+++|
T Consensus 138 ~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~i~~~~ 208 (407)
T 3nra_A 138 ANRKLVEFFEG---EMVPVQLDYVSADETRAGLDLTGLEEAFKAG------ARVFLFSNPNNPAGVVYSAEEIGQIAALA 208 (407)
T ss_dssp HHHHHHHHTTC---EEEEEEBCCCSSCCSSCCBCHHHHHHHHHTT------CCEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred chHHHHHHcCC---EEEEeecccccccCcCCCcCHHHHHHHHhhC------CcEEEEcCCCCCCCcccCHHHHHHHHHHH
Confidence 99999999999 999999842 136789999999999763 346788899999999988 99999999
Q ss_pred HHhCceEEeeccccchhccCccchhh--hc-CCCCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCcc
Q 038818 257 KRYSIWVHVDAAYAGSACICPEFRHF--ID-GIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKA 332 (486)
Q Consensus 257 ~~~g~~lhvD~a~g~~~~~~~~~~~~--~~-~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~ 332 (486)
++||+++++|++|+++.......... +. .....+.++.+++|+++ ....+|+++.+ +............+..
T Consensus 209 ~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~l~~~~~~~~~--- 284 (407)
T 3nra_A 209 ARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGS-RAIIARMEKLQAIVSL--- 284 (407)
T ss_dssp HHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEEC-HHHHHHHHHHHHHHTS---
T ss_pred HHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcC-HHHHHHHHHHHhhhcc---
Confidence 99999999999998754322111111 10 11245577889999998 44567877764 3332211110000100
Q ss_pred CCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeec
Q 038818 333 SDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLP 410 (486)
Q Consensus 333 ~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~ 410 (486)
....+..+++...+ +.+.+++..++..++++++.+.|++++++++..+.....+.+.+..
T Consensus 285 ------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~ 346 (407)
T 3nra_A 285 ------------------RAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPK 346 (407)
T ss_dssp ------------------SSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCC
T ss_pred ------------------CCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCC
Confidence 01122222232323 3356788888899999999999999888887644433444444432
Q ss_pred CCCCCCCCCCccchHHHHHHHHHHHHh-cCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 411 SASGLGDGKANEGANELNRKLLESINA-SGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
.. . ...++.+.|.+ .|+.+..+..+. +..++|++++ +++++|+++++.|.++++++.
T Consensus 347 ~~---------~----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~i~~~~~~l~~~~~~~~ 406 (407)
T 3nra_A 347 LA---------V----APAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFS---QDHEAAVAAARRIVTLVERYR 406 (407)
T ss_dssp BS---------S----CHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECC---SCHHHHHHHHHHHHHHHHHHB
T ss_pred CC---------C----CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeC---CCHHHHHHHHHHHHHHHHHhh
Confidence 11 0 12355666654 487544333222 4678999985 278899999999999988764
No 56
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.93 E-value=1.1e-24 Score=218.36 Aligned_cols=323 Identities=14% Similarity=0.087 Sum_probs=221.4
Q ss_pred HHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccc
Q 038818 88 GFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGR 167 (486)
Q Consensus 88 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 167 (486)
..+.+.+...+......|...+...++++.+.+|+.+.+|++.+ ...+++|+|||+|+..++.+...
T Consensus 57 ~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~-----~~~v~~~~g~t~al~~~~~~l~~-------- 123 (389)
T 1o4s_A 57 EPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDIS-----PDQVVVTNGAKQALFNAFMALLD-------- 123 (389)
T ss_dssp HHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCC-----GGGEEEESHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-----HHHEEEecCHHHHHHHHHHHhCC--------
Confidence 34555555555443335555556789999999999998887421 12789999999999888776532
Q ss_pred cCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC
Q 038818 168 ENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD 247 (486)
Q Consensus 168 ~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id 247 (486)
+++.|+++..+|.++..+++..|. +++.+|.++++++.+|+++|++++++. +.+|+++.++|++|.+-
T Consensus 124 ---~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~ 191 (389)
T 1o4s_A 124 ---PGDEVIVFSPVWVSYIPQIILAGG---TVNVVETFMSKNFQPSLEEVEGLLVGK------TKAVLINSPNNPTGVVY 191 (389)
T ss_dssp ---TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECCGGGTTCCCHHHHHHTCCTT------EEEEEEESSCTTTCCCC
T ss_pred ---CCCEEEEcCCCchhHHHHHHHcCC---EEEEEecCCccCCCCCHHHHHHhcccC------ceEEEEcCCCCCCCCCC
Confidence 567788888999999999999999 999999875335789999999988642 44677889999999996
Q ss_pred C---chHHHHHHHHhCceEEeeccccchhccCc--cchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHh
Q 038818 248 P---LGPLCDIAKRYSIWVHVDAAYAGSACICP--EFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKAL 321 (486)
Q Consensus 248 p---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~--~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~ 321 (486)
| +++|+++|++||+++++|++|+.+....+ .... +.+....|.++.++||+++.| ..+|+++++++ ... .+
T Consensus 192 ~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~-~~~-~l 268 (389)
T 1o4s_A 192 RREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILD-VSEGFDRIVYINGFSKSHSMTGWRVGYLISSEK-VAT-AV 268 (389)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHH-HCSSSTTEEEEEESTTTTTCGGGCCEEEECCHH-HHH-HH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhh-cCCCCCcEEEEeechhhcCCcccceEEEEeCHH-HHH-HH
Confidence 6 99999999999999999999987543211 1111 222246789999999999733 34888888543 322 22
Q ss_pred cCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCe
Q 038818 322 STNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNF 401 (486)
Q Consensus 322 ~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~ 401 (486)
.....+. +-....+..+++...+.. +++++.++..++++++.+.|+++ ++++.. +..
T Consensus 269 ~~~~~~~--------------------~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~ 325 (389)
T 1o4s_A 269 SKIQSHT--------------------TSCINTVAQYAALKALEV-DNSYMVQTFKERKNFVVERLKKM-GVKFVE-PEG 325 (389)
T ss_dssp HHHHHHH--------------------TCSCCHHHHHHHHHHTTC-CCHHHHHHHHHHHHHHHHHHHHT-TCCCCC-CSB
T ss_pred HHHhhhc--------------------ccCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHhc-CCeeec-CCc
Confidence 1100000 001123444555555533 37778888899999999999887 777654 444
Q ss_pred eEE-EEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 402 AVV-CFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 402 ~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
+.+ .+.+. . + ..++.+.|. +.|+.+..+..+...+++|+++. +++++|+++++.|.+++
T Consensus 326 ~~~~~~~~~-~-------------~--~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~---~~~~~l~~~l~~l~~~l 386 (389)
T 1o4s_A 326 AFYLFFKVR-G-------------D--DVKFCERLLEEKKVALVPGSAFLKPGFVRLSFA---TSIERLTEALDRIEDFL 386 (389)
T ss_dssp SSEEEEECS-S-------------C--HHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC---SCHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCC-C-------------C--HHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEe---CCHHHHHHHHHHHHHHH
Confidence 443 34443 1 1 235666665 67875444333322358999985 37789999999998876
Q ss_pred H
Q 038818 480 D 480 (486)
Q Consensus 480 ~ 480 (486)
+
T Consensus 387 ~ 387 (389)
T 1o4s_A 387 N 387 (389)
T ss_dssp T
T ss_pred h
Confidence 4
No 57
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.93 E-value=5.7e-25 Score=220.32 Aligned_cols=328 Identities=12% Similarity=0.046 Sum_probs=220.3
Q ss_pred HHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcc-eEEcCCchHHHHHHHHHHHHHHHHHccc
Q 038818 89 FLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGG-GVIQGTTCEAILCTLAAARDQILNEIGR 167 (486)
Q Consensus 89 ~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~-~~~t~ggt~a~~~al~~a~~~~~~~~~~ 167 (486)
.+.+.+...+......|...+...++++.+.+|+.+.+|.+... .. .++|+||++|+..++.+...
T Consensus 43 ~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-----~~~v~~~~g~~~a~~~~~~~~~~-------- 109 (389)
T 1gd9_A 43 HIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADP-----KTEIMVLLGANQAFLMGLSAFLK-------- 109 (389)
T ss_dssp HHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCT-----TTSEEEESSTTHHHHHHHTTTCC--------
T ss_pred HHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC-----CCeEEEcCChHHHHHHHHHHhCC--------
Confidence 34445544443323345544567899999999999998863221 26 89999999999887766532
Q ss_pred cCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC
Q 038818 168 ENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD 247 (486)
Q Consensus 168 ~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id 247 (486)
+++.|+++..+|+++..+++..|+ +++.+|+++.+++.+|+++|++++++. +.+|+++.++|++|.+-
T Consensus 110 ---~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~ 177 (389)
T 1gd9_A 110 ---DGEEVLIPTPAFVSYAPAVILAGG---KPVEVPTYEEDEFRLNVDELKKYVTDK------TRALIINSPCNPTGAVL 177 (389)
T ss_dssp ---TTCEEEEEESCCTTHHHHHHHHTC---EEEEEECCGGGTTCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCC
T ss_pred ---CCCEEEEcCCCchhHHHHHHHCCC---EEEEeccCCccCCCCCHHHHHHhcCcC------ceEEEEECCCCCCCcCC
Confidence 567788898999999999999999 999999875334689999999988642 44677889999999986
Q ss_pred ---CchHHHHHHHHhCceEEeeccccchhccCccchhh--hcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHh
Q 038818 248 ---PLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHF--IDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKAL 321 (486)
Q Consensus 248 ---pl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~ 321 (486)
++++|+++|++||+++++|++|+++.......... +.+....|.++.++||+++.| ..+|++++++ .... .+
T Consensus 178 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~~-~l 255 (389)
T 1gd9_A 178 TKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPS-WIIE-RM 255 (389)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCH-HHHH-HH
T ss_pred CHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECH-HHHH-HH
Confidence 49999999999999999999998765421111111 122345788999999998744 3478888864 3322 22
Q ss_pred cCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chH--HHHHHHHHHHHHHHHHHHHHhCCCCeEEec
Q 038818 322 STNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVA--NLRNFLRSHVRMAQLFQELVGGDNRFEIVA 397 (486)
Q Consensus 322 ~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~--g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 397 (486)
.....+.. . ....+..+++...+ +.+ +++++.++..++++++.+.|+++ ++++..
T Consensus 256 ~~~~~~~~------------------~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 314 (389)
T 1gd9_A 256 VKFQMYNA------------------T--CPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM-GLPTVK 314 (389)
T ss_dssp HHHHTTTT------------------C--SCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCCC
T ss_pred HHHHhhhc------------------c--CCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHc-CCeecC
Confidence 11000000 0 11223333333333 234 67788888999999999999987 777654
Q ss_pred CCCeeE-EEEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHH
Q 038818 398 PRNFAV-VCFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWK 473 (486)
Q Consensus 398 ~~~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~ 473 (486)
+..+. +.+.+.... . + ..++.+.|. ++|+.+..+..+. +..++|+++.. ++++|+++++
T Consensus 315 -~~~~~~~~~~~~~~~---------~--~--~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~---~~~~i~~~l~ 377 (389)
T 1gd9_A 315 -PKGAFYIFPRIRDTG---------L--T--SKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT---AYEKLEEAMD 377 (389)
T ss_dssp -CCBTTEECCBCGGGT---------C--C--HHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS---CHHHHHHHHH
T ss_pred -CCeeeEEEEeccCCC---------C--C--HHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC---CHHHHHHHHH
Confidence 33343 344443210 0 1 245677776 6787544333221 35689999853 7789999999
Q ss_pred HHHHHHHH
Q 038818 474 VVQEKLDG 481 (486)
Q Consensus 474 ~l~~~~~~ 481 (486)
.|.+++++
T Consensus 378 ~l~~~~~~ 385 (389)
T 1gd9_A 378 RMERVLKE 385 (389)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998765
No 58
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.93 E-value=5e-25 Score=216.87 Aligned_cols=339 Identities=13% Similarity=0.064 Sum_probs=217.6
Q ss_pred cceecCCCCCHHHHHHHHHHhhcC----CCcccc---ccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEE-cCCch
Q 038818 76 YFAYFPSSGSIAGFLGEMLSSGFN----VVGFNW---MSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVI-QGTTC 147 (486)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~n----~~~~~~---~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~-t~ggt 147 (486)
.+.|.|++...|..+.+.+...+. ++...+ ..++.+.++-.++++.+++++|.++.. ..+| |+|||
T Consensus 6 ~~~f~pgpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~------~v~f~t~~~T 79 (361)
T 3m5u_A 6 KINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDY------EVLFLQGGAS 79 (361)
T ss_dssp CEECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTE------EEEEESSHHH
T ss_pred eEeecCCCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCcHH
Confidence 455667766655555555554431 212211 225566777788999999999997542 5777 99999
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHC
Q 038818 148 EAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQA 227 (486)
Q Consensus 148 ~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~ 227 (486)
+++..++.... . +....+|+.+..+|.+ .+.++..|+ ++..+++++++.+..+++. + |++++
T Consensus 80 ~a~n~~~~~~~-~--------~~~~~~i~~~~~~~~~-~~~a~~~G~---~v~~~~~~~~g~~~~~~~~-~--l~~~t-- 141 (361)
T 3m5u_A 80 LQFAMIPMNLA-L--------NGVCEYANTGVWTKKA-IKEAQILGV---NVKTVASSEESNFDHIPRV-E--FSDNA-- 141 (361)
T ss_dssp HHHHHHHHHHC-C--------SSCEEEEECSHHHHHH-HHHHHHTTC---CEEEEEECTTTTSCSCCCC-C--CCTTS--
T ss_pred HHHHHHHHhcC-C--------CCeEEEEeCCHHHHHH-HHHHHHcCC---ceEEEecccCcCCCcCChh-h--cCCCC--
Confidence 99877766442 1 1112345555555543 344566788 9999999864322256655 3 65443
Q ss_pred CCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcce
Q 038818 228 GLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCC 307 (486)
Q Consensus 228 g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g 307 (486)
.+|.+++.+|.+|.+.|. |++ +|+++|||++++.+....+ +..+|.+++++|||++ |.|+|
T Consensus 142 ----~lv~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~~id--------~~~~d~~~~s~~K~~g-p~G~g 202 (361)
T 3m5u_A 142 ----DYAYICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSRKVD--------FSNIALFYGGVQKNAG-ISGLS 202 (361)
T ss_dssp ----SEEEEESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSSCCC--------CTTEEEEEEETTTTSS-CTTCE
T ss_pred ----CEEEEeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCCCCC--------cccCCEEEEechhccC-CCccE
Confidence 378889999999998552 344 4999999999988766553 2257899999999995 99999
Q ss_pred EEEeeCchHHHHHhc-CCcccccCccCCCCCccCCCCccccCCCC-CCchHHHHHHHHhchH-HHHHHHHHHHHHHHHHH
Q 038818 308 CLWVKNPNALIKALS-TNPEFLRNKASDSKQVVDYKDWQITLSRR-FRALKLWLVLRSFGVA-NLRNFLRSHVRMAQLFQ 384 (486)
Q Consensus 308 ~~~~~~~~~~~~~~~-~~~~y~~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~ 384 (486)
+++++++.. .+... ..+.|+....... . . ....+-. ....++..+++.+-.. |++++.++..+++++++
T Consensus 203 ~l~~~~~~~-~~~~~~~~p~~~~~~~~~~----~--~-~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~ 274 (361)
T 3m5u_A 203 CIFIRKDML-ERSKNKQIPSMLNYLTHAE----N--Q-SLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLY 274 (361)
T ss_dssp EEEEEHHHH-HHHHTCCCCGGGCHHHHHH----T--T-TCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred EEEEcHHHH-hhhcCCCCCceeehHHHhh----c--C-CCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 999987643 22212 2233321110000 0 0 0001111 1224555667766666 79999999999999999
Q ss_pred HHHhCCCCe-EEecCC--C-eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecC
Q 038818 385 ELVGGDNRF-EIVAPR--N-FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGA 460 (486)
Q Consensus 385 ~~L~~~~~~-~~~~~~--~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~ 460 (486)
+.|++++++ ++..++ . ..+++|.+.+.. .....+...|.++|+....+ ....+.+|+|+++
T Consensus 275 ~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~-------------~~~~~~~~~L~~~gI~~~~g--~~~~g~iRiS~~~ 339 (361)
T 3m5u_A 275 ECIDLSNGFYKGHADKKDRSLMNVSFNIAKNK-------------DLEPLFVKEAEEAGMIGLKG--HRILGGIRASIYN 339 (361)
T ss_dssp HHHHTSTTSEEESSCGGGBCSSEEEEEESSCT-------------THHHHHHHHHHHTTEECCBC--CTTTCSEEEECCT
T ss_pred HHHHHCCCeeeccCCHHHcCCeEEEEECCCch-------------hhhHHHHHHHHHCCCEEecC--CCccCeEEEEccC
Confidence 999999766 654332 2 357899886410 11135666677778643222 1222459999965
Q ss_pred CCCcHHHHHHHHHHHHHHHHH
Q 038818 461 TLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 461 ~~tt~~did~~i~~l~~~~~~ 481 (486)
.+|++|||+++++|+++.++
T Consensus 340 -~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 340 -ALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp -TSCHHHHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHHHHHh
Confidence 67888999999999998765
No 59
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.93 E-value=1.3e-24 Score=218.52 Aligned_cols=332 Identities=11% Similarity=0.028 Sum_probs=221.6
Q ss_pred HHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcccc
Q 038818 89 FLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRE 168 (486)
Q Consensus 89 ~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~ 168 (486)
.+.+.+...+......|... ..++++.+.+++++.+|.+... ...++|+||++|+..++.+...
T Consensus 48 ~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~-----~~v~~t~g~~~a~~~~~~~l~~--------- 111 (399)
T 1c7n_A 48 ELIEGLKKYLDETVLGYTGP--TEEYKKTVKKWMKDRHQWDIQT-----DWIINTAGVVPAVFNAVREFTK--------- 111 (399)
T ss_dssp HHHHHHHHHHHHCCCSSBCC--CHHHHHHHHHHHHHHHCCCCCG-----GGEEEESSHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHHHhcCCCCCCCC--cHHHHHHHHHHHHHHhCCCCCh-----hhEEEcCCHHHHHHHHHHHhcC---------
Confidence 34444444443222344333 6789999999999988853221 2689999999999888776532
Q ss_pred CCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecC-CCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC
Q 038818 169 NISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTT-KSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD 247 (486)
Q Consensus 169 ~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d-~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id 247 (486)
+++.|+++..+|.++..+++..|. +++.+|++ +++++.+|+++|++++++. .+.+|+++.++|++|.+-
T Consensus 112 --~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~g~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~ 181 (399)
T 1c7n_A 112 --PGDGVIIITPVYYPFFMAIKNQER---KIIECELLEKDGYYTIDFQKLEKLSKDK-----NNKALLFCSPHNPVGRVW 181 (399)
T ss_dssp --TTCEEEECSSCCTHHHHHHHTTTC---EEEECCCEEETTEEECCHHHHHHHHTCT-----TEEEEEEESSBTTTTBCC
T ss_pred --CCCEEEEcCCCcHhHHHHHHHcCC---EEEecccccCCCCEEEcHHHHHHHhccC-----CCcEEEEcCCCCCCCcCc
Confidence 567788899999999999999998 89999886 3234679999999998621 245677889999999998
Q ss_pred C---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCC----CCCCceeeccccccCCC-CcceEEEeeCchHHHH
Q 038818 248 P---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGI----EGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIK 319 (486)
Q Consensus 248 p---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~----~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~ 319 (486)
| +++|+++|++||+++++|++|+++......... +..+ ...+.+..+++|+++.| ..+|++++++++....
T Consensus 182 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~ 260 (399)
T 1c7n_A 182 KKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTV-FQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRER 260 (399)
T ss_dssp CHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCccc-HHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHHHH
Confidence 8 999999999999999999999875432111111 1111 13446778899999844 4579998876544332
Q ss_pred HhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEe
Q 038818 320 ALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGG-DNRFEIV 396 (486)
Q Consensus 320 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~ 396 (486)
.......+ +. + ....+..+++...+ +.+.+++..++..++++++.+.|++ +|++++.
T Consensus 261 l~~~~~~~-----------------~~--~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 320 (399)
T 1c7n_A 261 FTKSRDAT-----------------SG--M-PFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAP 320 (399)
T ss_dssp HHHHHHHT-----------------TC--C-CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCC
T ss_pred HHHHHhhc-----------------cc--C-CCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEe
Confidence 21111101 00 0 11233333333332 3567788888899999999999988 7888765
Q ss_pred cCCCeeEEE-EEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHH
Q 038818 397 APRNFAVVC-FRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAW 472 (486)
Q Consensus 397 ~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i 472 (486)
++..+.+. +.+.... . + ..++.+.|. +.|+.+..+..+. +..++|+++.. .+++|++++
T Consensus 321 -~~~~~~~~~~~~~~~~---------~--~--~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~---~~~~l~~~l 383 (399)
T 1c7n_A 321 -LIEGTYLQWIDFRALK---------M--D--HKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAA---PSSVIQESL 383 (399)
T ss_dssp -CCSBSSEEEEECGGGC---------C--C--HHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCS---CHHHHHHHH
T ss_pred -cCCceEEEEEEcccCC---------C--C--HHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEecc---CHHHHHHHH
Confidence 34445554 5554210 0 1 235677776 6788544433222 35689999854 267999999
Q ss_pred HHHHHHHHHHhh
Q 038818 473 KVVQEKLDGILA 484 (486)
Q Consensus 473 ~~l~~~~~~l~~ 484 (486)
+.|.++++++.+
T Consensus 384 ~~l~~~l~~~~~ 395 (399)
T 1c7n_A 384 ERLNKALKDLKN 395 (399)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHHHh
Confidence 999999887653
No 60
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.93 E-value=3.5e-24 Score=215.90 Aligned_cols=337 Identities=15% Similarity=0.115 Sum_probs=219.7
Q ss_pred HHHHHHHHHhhcCCC---ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHH
Q 038818 87 AGFLGEMLSSGFNVV---GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILN 163 (486)
Q Consensus 87 ~~~~~~~l~~~~n~~---~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~ 163 (486)
+..+.+.+...+... .. |...+...++++.+.+++.+.+|++... ..+++|+|||+|+..++.+++.
T Consensus 51 ~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~-----~~v~~t~g~t~a~~~~~~~~~~---- 120 (407)
T 2zc0_A 51 RAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELAAFLKKYDHLEVSP-----ENIVITIGGTGALDLLGRVLID---- 120 (407)
T ss_dssp HHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCG-----GGEEEESHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCc-----ceEEEecCHHHHHHHHHHHhcC----
Confidence 344555554444321 23 5444457889999999998888854221 2689999999999888877643
Q ss_pred HccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEE-EeecCCcc
Q 038818 164 EIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFL-CATVGTTA 242 (486)
Q Consensus 164 ~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~v-v~~~gtt~ 242 (486)
++..|+++..+|.++..+++..|. +++.+|+++ + .+|+++|+++++.....+..+.+| +.+.++|+
T Consensus 121 -------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~--~-~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~np 187 (407)
T 2zc0_A 121 -------PGDVVITENPSYINTLLAFEQLGA---KIEGVPVDN--D-GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNP 187 (407)
T ss_dssp -------TTCEEEEEESCCHHHHHHHHTTTC---EEEEEEEET--T-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTT
T ss_pred -------CCCEEEEeCCChHHHHHHHHHcCC---EEEEcccCC--C-CCCHHHHHHHHHhhhcccCCceEEEECCCCCCC
Confidence 566788888999999999999999 999999875 3 399999999998433232234455 56788999
Q ss_pred ccccCCch---HHHHHHHHhCceEEeeccccchhccCccchhhhcCC--CCCCceeeccccccCCCCcceEEEeeCchHH
Q 038818 243 ITTVDPLG---PLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGI--EGADSFSLNAHKWFFTTLDCCCLWVKNPNAL 317 (486)
Q Consensus 243 ~G~idpl~---~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~--~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~ 317 (486)
+|.+.|++ +|+++|++||+++|+|++|+++......... +..+ ...+.+..+++|+++....+|+++++ ++..
T Consensus 188 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~-~~~~ 265 (407)
T 2zc0_A 188 MGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVP-LKALDNEGRVIVAGTLSKVLGTGFRIGWIIAE-GEIL 265 (407)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCC-GGGGCSSCCEEEEEESTTTTCTTSCCEEEECC-HHHH
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCC-hhhcCCCCCEEEEcccccccCCCcceEEEecC-HHHH
Confidence 99998886 9999999999999999999875432111111 1111 12335677789999933458988886 3333
Q ss_pred HHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--c--h-HHHHHHHHHHHHHHHHHHHHHhC-CC
Q 038818 318 IKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--G--V-ANLRNFLRSHVRMAQLFQELVGG-DN 391 (486)
Q Consensus 318 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g--~-~g~~~~~~~~~~~a~~l~~~L~~-~~ 391 (486)
.........+ +. ....+..+++...+ + . +.++++.++..++++++.+.|++ .|
T Consensus 266 ~~~~~~~~~~-----------------~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 324 (407)
T 2zc0_A 266 KKVLMQKQPI-----------------DF----CAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLP 324 (407)
T ss_dssp HHHHHHHTTT-----------------TS----SSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHhh-----------------cC----CCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 2211100000 00 11223333333322 2 2 34566777788899999999977 57
Q ss_pred CeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhc-CcEEEeeeeEC----CEeEEEEEecCCCCcHH
Q 038818 392 RFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINAS-GQLYVSHGMVA----GIYFIRFAVGATLTEDR 466 (486)
Q Consensus 392 ~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~----~~~~lR~~~~~~~tt~~ 466 (486)
++++..+.....+.+.+.... + ..++.+.|.++ |+.+..+..+. +..++|+++..+ +++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~------------~--~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~--~~~ 388 (407)
T 2zc0_A 325 NAEFTKPIAGMFVMFFLPEGA------------D--GISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRP--SKE 388 (407)
T ss_dssp TSCBCCCSBSSEEEEECSTTC------------C--HHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSS--CTT
T ss_pred CCEEecCCCcEEEEEEcCCCC------------C--HHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCC--CHH
Confidence 777654444445666664210 1 24567777777 87543332221 356899999644 677
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q 038818 467 HVIAAWKVVQEKLDGILAT 485 (486)
Q Consensus 467 did~~i~~l~~~~~~l~~~ 485 (486)
+|+++++.|+++++++.++
T Consensus 389 ~i~~~~~~l~~~l~~~~~~ 407 (407)
T 2zc0_A 389 EIPIGIKKLAKLYKEKFGE 407 (407)
T ss_dssp HHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHhcC
Confidence 9999999999999887653
No 61
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.93 E-value=9.8e-25 Score=221.09 Aligned_cols=331 Identities=12% Similarity=0.057 Sum_probs=221.3
Q ss_pred HHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcccc
Q 038818 89 FLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRE 168 (486)
Q Consensus 89 ~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~ 168 (486)
.+.+.+...+......|... ..++++++.+|+++.+|++... ...++|+||++|+..++.+++.
T Consensus 78 ~v~~a~~~~~~~~~~~y~~~--~~~l~~~l~~~l~~~~g~~~~~-----~~v~~~~g~~ea~~~a~~~~~~--------- 141 (421)
T 3l8a_A 78 EIKEAIINYGREHIFGYNYF--NDDLYQAVIDWERKEHDYAVVK-----EDILFIDGVVPAISIALQAFSE--------- 141 (421)
T ss_dssp HHHHHHHHHHHHCCSSCBCC--CHHHHHHHHHHHHHHHCCCCCG-----GGEEEESCHHHHHHHHHHHHSC---------
T ss_pred HHHHHHHHHHhcCCcCCCCC--CHHHHHHHHHHHHHHhCCCCCH-----HHEEEcCCHHHHHHHHHHHhcC---------
Confidence 34444444443333334332 3788999999999999954321 2789999999999988887643
Q ss_pred CCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecC-CCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc-
Q 038818 169 NISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTT-KSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV- 246 (486)
Q Consensus 169 ~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d-~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i- 246 (486)
++..|++...+|+++..++...|. +++.+|++ .++++.+|+++|++++++. .+.+|+++.++|++|.+
T Consensus 142 --~gd~Vi~~~~~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~le~~i~~~-----~~~~vil~~p~nptG~~~ 211 (421)
T 3l8a_A 142 --KGDAVLINSPVYYPFARTIRLNDH---RLVENSLQIINGRFEIDFEQLEKDIIDN-----NVKIYLLCSPHNPGGRVW 211 (421)
T ss_dssp --TEEEEEEEESCCHHHHHHHHHTTE---EEEEEECEEETTEEECCHHHHHHHHHHT-----TEEEEEEESSBTTTTBCC
T ss_pred --CCCEEEECCCCcHHHHHHHHHCCC---EEEeccccccCCCeeeCHHHHHHHhhcc-----CCeEEEECCCCCCCCCcC
Confidence 567788888999999999999999 99999986 3456789999999999742 14578889999999998
Q ss_pred --CCchHHHHHHHHhCceEEeeccccchhccCccchhhhc---CCCCCCceeeccccccC-CCCcceEEEeeCchHHHHH
Q 038818 247 --DPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFID---GIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKA 320 (486)
Q Consensus 247 --dpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~---~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~ 320 (486)
+++++|+++|++||+++++|++|+++............ .....+.+..+++|+++ ...++|++++++++.....
T Consensus 212 ~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~ 291 (421)
T 3l8a_A 212 DNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKF 291 (421)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHH
Confidence 78999999999999999999999765432211111111 11234467888999997 5567899998866543321
Q ss_pred hcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCC
Q 038818 321 LSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRN 400 (486)
Q Consensus 321 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~ 400 (486)
......+ +......+...++..++.. +.+.++++.++..++++++.+.|+++|++++..+.
T Consensus 292 ~~~~~~~-----------------~~~~~n~~~~~a~~aal~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~- 352 (421)
T 3l8a_A 292 QYRQLAN-----------------NQHEVPTVGMIATQAAFQY-GKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPE- 352 (421)
T ss_dssp HHHHHHT-----------------TCSCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECCS-
T ss_pred HHHHHhc-----------------ccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCCC-
Confidence 1100000 0000101111222333332 56678888899999999999999887889887543
Q ss_pred eeEEE-EEeecCCCCCCCCCCccchHHHHHHHHHHHHh-cCcEEEeeeeE--CCEeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 401 FAVVC-FRVLPSASGLGDGKANEGANELNRKLLESINA-SGQLYVSHGMV--AGIYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 401 ~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~--~~~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
.+.+. +.+..... . ..++.+.|.+ .|+.+..+..+ .+.+++|+++. +++++|+++++.|+
T Consensus 353 ~~~~~~v~~~~~~~---------~----~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~---~~~~~i~~~l~~l~ 416 (421)
T 3l8a_A 353 GTYLVWLDFSAYAI---------A----QPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA---TPKNTVQEALSRII 416 (421)
T ss_dssp BSSEEEEECGGGTC---------C----TTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC---SCHHHHHHHHHHHH
T ss_pred eeEEEEEeccccCC---------C----HHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec---CCHHHHHHHHHHHH
Confidence 34444 55543110 0 1245666654 47654333222 23578999984 57889999999998
Q ss_pred HHHH
Q 038818 477 EKLD 480 (486)
Q Consensus 477 ~~~~ 480 (486)
++++
T Consensus 417 ~~l~ 420 (421)
T 3l8a_A 417 SVFG 420 (421)
T ss_dssp HHC-
T ss_pred HHHh
Confidence 8754
No 62
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.93 E-value=2.6e-24 Score=214.89 Aligned_cols=327 Identities=10% Similarity=0.027 Sum_probs=212.3
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH--
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA-- 184 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-- 184 (486)
.++.+.++.+++++++++++|.+ . ..++|+|||+|+..++... . +++.|+++...|++
T Consensus 29 ~~~~~~~~~~~~~~~l~~~~~~~-~-------~v~~~~sgt~a~~~~~~~~-~-----------~gd~vi~~~~~~~~~~ 88 (379)
T 3ke3_A 29 MSKAFQEVMNDLLSNLKTVYNAE-A-------AVIIPGSGTYGMEAVARQL-T-----------IDEDCLIIRNGWFSYR 88 (379)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTCS-E-------EEEEESCHHHHHHHHHHHH-C-----------TTCEEEEEECSHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhCCC-C-------EEEEcCChhHHHHHHHHhC-C-----------CCCeEEEEeCCchhHH
Confidence 36677788889999999999987 3 5789999999987765332 1 45567777777876
Q ss_pred HHHHHHHcCCCCCCeEEEecCCCC------C-cccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHH
Q 038818 185 LQKAAQIAGIDPKNFRAIKTTKSS------S-FTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCD 254 (486)
Q Consensus 185 ~~~a~~~~G~g~~~v~~v~~d~~~------~-~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~ 254 (486)
+...++..|++. +++.++++..+ . +.+|+++|+++|++.. +.+|++++++|++|.+.| +++|++
T Consensus 89 ~~~~~~~~g~~~-~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~~~G~~~~~~~l~~i~~ 162 (379)
T 3ke3_A 89 WTQILEKGKFAK-SSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDK-----SAIVYAPHVETSSGIILSEEYIKALSE 162 (379)
T ss_dssp HHHHHHHHCCSS-EEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHT-----CSEEEEESEETTTTEECCHHHHHHHHH
T ss_pred HHHHHHHhCCCC-ceEEEeccccccccccCCCCCCCHHHHHHHHhhcC-----CcEEEEEeecCCCceeCCHHHHHHHHH
Confidence 345566666522 56777764310 1 2689999999996531 336888999999999999 999999
Q ss_pred HHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhc-CCcccccCcc-
Q 038818 255 IAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALS-TNPEFLRNKA- 332 (486)
Q Consensus 255 i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~-~~~~y~~~~~- 332 (486)
+|++||+++|+|++++ +....+ ... .++|.+++++||++++|.|+|+++++++.. ..... ...++.....
T Consensus 163 ~~~~~~~~li~D~~~~-g~~~~~-~~~-----~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~-~~l~~~~~~~~~~~~~~ 234 (379)
T 3ke3_A 163 AVHSVGGLLVIDCIAS-GCVWLD-MKE-----LGIDVLISAPQKGWSSTPCAGLVMLSAAAI-KKVESTESNCFSLDLKQ 234 (379)
T ss_dssp HHHHTTCEEEEECTTC-TTCCCC-HHH-----HTCSEEEECTTTTTCSCCCEEEEEECHHHH-HHHHTCCCSCSTTCHHH
T ss_pred HHHHcCCEEEEEeccc-CCcccc-ccc-----cCCCEEEecchhhcCCCCceEEEEECHHHH-HhhhcCCCCceeecHHH
Confidence 9999999999999997 433222 111 168999999999999999999999876532 22211 1122211100
Q ss_pred CCC-CCccCCCCccccCCCCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCC--eeEEEEEe
Q 038818 333 SDS-KQVVDYKDWQITLSRRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRN--FAVVCFRV 408 (486)
Q Consensus 333 ~~~-~~~~~~~~~~~~~sr~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~--~~~v~f~~ 408 (486)
... ......+......+-.. ...++..++..+..+|++++.++..++++++++.|+++ +++++.++. ++++....
T Consensus 235 ~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~~~~~~~~i~~~~ 313 (379)
T 3ke3_A 235 WLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIESVAAEGFEAPGVVVSY 313 (379)
T ss_dssp HHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBCTTCBCSSEEEEE
T ss_pred HHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCCccccCceEEEEc
Confidence 000 00000000000001111 11234455666666778899999999999999999988 788765442 44443322
Q ss_pred ecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeee-----ECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 409 LPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGM-----VAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-----~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
.+. ... .+.+.|.++|+.+..+.. ..+...+|++++ ..+|++||++++++|+++++++.
T Consensus 314 ~~~-------------~~~--~~~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~-~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 314 TER-------------DDM--HKGSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLF-GLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp CSC-------------HHH--HSSHHHHHTTCCCEECCCCSSCCCTTCCEEEEECC-SHHHHTCHHHHHHHHHHHHHHHH
T ss_pred cCC-------------cch--HHHHHHHHCCeEEeCCccccccccCcCCEEEEeCC-cCCCHHHHHHHHHHHHHHHHHhc
Confidence 221 111 124456677875332211 112568999996 46688899999999999998775
Q ss_pred h
Q 038818 484 A 484 (486)
Q Consensus 484 ~ 484 (486)
.
T Consensus 378 ~ 378 (379)
T 3ke3_A 378 A 378 (379)
T ss_dssp C
T ss_pred c
Confidence 3
No 63
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.92 E-value=1.4e-23 Score=210.95 Aligned_cols=301 Identities=11% Similarity=0.077 Sum_probs=205.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHc
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIA 192 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 192 (486)
....++++.+++++|.+ . .+++++||+++..++.+... ++..|+++...|.++..+++..
T Consensus 90 ~~~~~l~~~la~~~g~~-~--------~i~~~sGs~a~~~~~~~~~~-----------~gd~v~~~~~~~~~~~~~~~~~ 149 (401)
T 1fc4_A 90 DSHKELEQKLAAFLGME-D--------AILYSSCFDANGGLFETLLG-----------AEDAIISDALNHASIIDGVRLC 149 (401)
T ss_dssp HHHHHHHHHHHHHHTCS-E--------EEEESCHHHHHHTTHHHHCC-----------TTCEEEEETTCCHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhCCC-c--------EEEeCChHHHHHHHHHHHcC-----------CCCEEEEcchhHHHHHHHHHHc
Confidence 44566778888888886 2 35666778898877666532 5668888999999999999988
Q ss_pred CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeecccc-c
Q 038818 193 GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYA-G 271 (486)
Q Consensus 193 G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g-~ 271 (486)
|. +++.+| .+|+++|++++++....+..+.+|+++.++|++|.+.|+++|.++|++||+++++|++|+ +
T Consensus 150 g~---~~~~~~-------~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g 219 (401)
T 1fc4_A 150 KA---KRYRYA-------NNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVG 219 (401)
T ss_dssp CS---EEEEEC-------TTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTT
T ss_pred CC---ceEEEC-------CCCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECccccc
Confidence 98 888776 248999999998754433346688889999999999999999999999999999999996 4
Q ss_pred hhccCccchhhhcCC-CCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCC
Q 038818 272 SACICPEFRHFIDGI-EGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSR 350 (486)
Q Consensus 272 ~~~~~~~~~~~~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr 350 (486)
.............++ .+.|.++.++||+++++.| |+++.+ ++..........++... .
T Consensus 220 ~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~g-G~~~~~-~~~~~~l~~~~~~~~~~-----------------~-- 278 (401)
T 1fc4_A 220 FVGENGRGSHEYCDVMGRVDIITGTLGKALGGASG-GYTAAR-KEVVEWLRQRSRPYLFS-----------------N-- 278 (401)
T ss_dssp TSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSC-EEEEEC-HHHHHHHHHHCHHHHHS-----------------C--
T ss_pred ccCCCCCccHHHcCCCcCCcEEEecchhhccCCCC-EEEEcC-HHHHHHHHHhCcCceeC-----------------C--
Confidence 321111110111122 2578999999999966665 877775 44433222111112110 0
Q ss_pred CCCchHHHHHHHHhch-HHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHH
Q 038818 351 RFRALKLWLVLRSFGV-ANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNR 429 (486)
Q Consensus 351 ~~~~l~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 429 (486)
....+.+++++..+.. +..++..++..++++++.+.|+++ ++++. ++..+++.+.+.. .....
T Consensus 279 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~--------------~~~~~ 342 (401)
T 1fc4_A 279 SLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA-GFTLA-GADHAIIPVMLGD--------------AVVAQ 342 (401)
T ss_dssp CCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT-TCCBC-CSSSSEEEEEEEC--------------HHHHH
T ss_pred CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCccc-CCCCCEEEEEcCC--------------hHHHH
Confidence 1122333333332211 113577888889999999999987 77766 5566777777742 22345
Q ss_pred HHHHHHHhcCcEEEeeeeE----CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 430 KLLESINASGQLYVSHGMV----AGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 430 ~l~~~l~~~g~~~~~~~~~----~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
++.+.|.++|+.+ .+... .+..++|+++. ..+++++++++++.|+++++++
T Consensus 343 ~l~~~l~~~gi~v-~~~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~ 397 (401)
T 1fc4_A 343 KFARELQKEGIYV-TGFFYPVVPKGQARIRTQMS-AAHTPEQITRAVEAFTRIGKQL 397 (401)
T ss_dssp HHHHHHHHTTEEC-CEECTTSSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCcEE-eeecCCCCCCCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 6777788888743 33221 13568999984 5678889999999999998765
No 64
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.92 E-value=1.5e-23 Score=213.38 Aligned_cols=324 Identities=11% Similarity=0.067 Sum_probs=219.6
Q ss_pred cccChhhHHHHHHHHHHHHHHcC----CCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCC
Q 038818 105 WMSSPAATELENIVMDWLGEMLK----LPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQ 180 (486)
Q Consensus 105 ~~~~~~~~~le~~~~~~l~~l~g----~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~ 180 (486)
|.......++++.+.+++.+..| .+.+ .+++|+||++||..++.+.+. ++..|+++..
T Consensus 82 y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~-------~v~~~~gg~~a~~~~~~~l~~-----------~gd~vl~~~p 143 (435)
T 3piu_A 82 FQDYHGLPAFKKAMVDFMAEIRGNKVTFDPN-------HLVLTAGATSANETFIFCLAD-----------PGEAVLIPTP 143 (435)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHTTTSSCCCGG-------GEEEEEHHHHHHHHHHHHHCC-----------TTCEEEEEES
T ss_pred cCCCCCcHHHHHHHHHHHHHhhCCCCCCCHH-------HEEEcCChHHHHHHHHHHhcC-----------CCCeEEECCC
Confidence 44444567899999999987766 2333 789999999999888877643 5677888889
Q ss_pred CchHHHHHHH-HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHH
Q 038818 181 THSALQKAAQ-IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIA 256 (486)
Q Consensus 181 ~H~s~~~a~~-~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~ 256 (486)
+|.++..++. ..|. +++.+|.++++.+.+|+++|+++|++....+..+.+|+++.++|++|.+-| +++|+++|
T Consensus 144 ~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~ 220 (435)
T 3piu_A 144 YYPGFDRDLKWRTGV---EIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFV 220 (435)
T ss_dssp CCTTHHHHTTTTTCC---EEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred ccccHHHHHHHhcCC---EEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHH
Confidence 9999988877 6888 999999986555789999999999886666656778889999999999855 68888999
Q ss_pred HHhCceEEeeccccchhccCccch---hhhcCC--------CCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcCC
Q 038818 257 KRYSIWVHVDAAYAGSACICPEFR---HFIDGI--------EGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTN 324 (486)
Q Consensus 257 ~~~g~~lhvD~a~g~~~~~~~~~~---~~~~~~--------~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~ 324 (486)
++||+++++|++|+++........ ...... .....+..++||+++ ....+|+++.+++.... .+...
T Consensus 221 ~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~-~~~~~ 299 (435)
T 3piu_A 221 EDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVA-AATKM 299 (435)
T ss_dssp HHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHH-HHHHH
T ss_pred HHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHH-HHHHH
Confidence 999999999999977543221111 111100 112266789999997 44568988886654432 22111
Q ss_pred cccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhc-----hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC
Q 038818 325 PEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFG-----VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR 399 (486)
Q Consensus 325 ~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 399 (486)
..+.. ...+...+....+. .+.+++..++..++++++.+.|++. ++++..+.
T Consensus 300 ~~~~~----------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 356 (435)
T 3piu_A 300 SSFGL----------------------VSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS-GISCLNGN 356 (435)
T ss_dssp GGGSC----------------------CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEECCCC
T ss_pred hhcCC----------------------CCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCC
Confidence 11100 01222222222221 2345667788888999999999987 88876544
Q ss_pred CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhc-CcEEEeeeeE--CCEeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 400 NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINAS-GQLYVSHGMV--AGIYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 400 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~--~~~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
...++.+.+.... .........++.+++.++ |+.+..+..+ .+..++|+++.. . ++++|+++++.|.
T Consensus 357 ~g~~~~~~l~~~~--------~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-~-~~e~i~~~l~~l~ 426 (435)
T 3piu_A 357 AGLFCWVDMRHLL--------RSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFAN-L-PERTLDLAMQRLK 426 (435)
T ss_dssp SSSEEEEECGGGS--------SSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSS-S-CHHHHHHHHHHHH
T ss_pred eeEEEEEEccccc--------ccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeC-C-CHHHHHHHHHHHH
Confidence 4356666664321 000012234677777666 7754433322 346789999843 3 7889999999999
Q ss_pred HHHHHHh
Q 038818 477 EKLDGIL 483 (486)
Q Consensus 477 ~~~~~l~ 483 (486)
++++++.
T Consensus 427 ~~l~~~~ 433 (435)
T 3piu_A 427 AFVGEYY 433 (435)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9987753
No 65
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.92 E-value=4.9e-24 Score=212.83 Aligned_cols=327 Identities=9% Similarity=0.031 Sum_probs=217.7
Q ss_pred HHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcccc
Q 038818 89 FLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRE 168 (486)
Q Consensus 89 ~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~ 168 (486)
.+.+.+...+......|... ..++++++.+++++.+|.+... ...++|+|||+|+..++.+...
T Consensus 41 ~v~~a~~~~~~~~~~~y~~~--~~~~~~~l~~~l~~~~g~~~~~-----~~v~~~~g~~~a~~~~~~~l~~--------- 104 (383)
T 3kax_A 41 PIQTALKKRIEHPIFGYTLP--PENIGDIICNWTKKQYNWDIQK-----EWIVFSAGIVPALSTSIQAFTK--------- 104 (383)
T ss_dssp HHHHHHHHHHHSCCCCCCCC--CTTHHHHHHHHHHHHHCCCCCG-----GGEEEESCHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHHHHHHhCCCCCh-----hhEEEcCCHHHHHHHHHHHhCC---------
Confidence 34455555544333334332 5778899999999999943221 2789999999999888776643
Q ss_pred CCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCC-CCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC
Q 038818 169 NISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKS-SSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD 247 (486)
Q Consensus 169 ~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~-~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id 247 (486)
+++.|+++..+|.++...++..|. +++.+|++++ +++.+|+++|+++++++ +.+|+++.++|++|.+-
T Consensus 105 --~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~ 173 (383)
T 3kax_A 105 --ENESVLVQPPIYPPFFEMVTTNNR---QLCVSPLQKQNDTYAIDFEHLEKQFQQG------VKLMLLCSPHNPIGRVW 173 (383)
T ss_dssp --TTCEEEECSSCCHHHHHHHHHTTC---EEEECCCEEETTEEECCHHHHHHHHTTT------CCEEEEESSBTTTTBCC
T ss_pred --CCCEEEEcCCCcHHHHHHHHHcCC---EEEeccceecCCcEEEcHHHHHHHhCcC------CeEEEEeCCCCCCCcCc
Confidence 567888999999999999999999 9999998642 24679999999999432 34677889999999997
Q ss_pred C---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCC---CCCCceeeccccccC-CCCcceEEEeeCchHHHHH
Q 038818 248 P---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGI---EGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKA 320 (486)
Q Consensus 248 p---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~---~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~ 320 (486)
| +++|+++|++||+++++|++|+.+.............. ...+.++.++||+++ .+..+|++++.++......
T Consensus 174 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 253 (383)
T 3kax_A 174 KKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLRQAF 253 (383)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHHHHHH
Confidence 6 56666679999999999999976543211111111100 134467888999998 5557888887665443321
Q ss_pred hcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEec
Q 038818 321 LSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGG-DNRFEIVA 397 (486)
Q Consensus 321 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~ 397 (486)
......+.. -....+..+++...+ +.+.++++.++..++++++.+.|++ +|++++..
T Consensus 254 ~~~~~~~~~--------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 313 (383)
T 3kax_A 254 TSIQYRQGF--------------------HGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMK 313 (383)
T ss_dssp HHHHHHTTC--------------------CCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECC
T ss_pred HHHHhhccc--------------------CCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEec
Confidence 110000000 012333444444443 3456788888899999999999987 78998864
Q ss_pred CCCeeEEE-EEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHH
Q 038818 398 PRNFAVVC-FRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWK 473 (486)
Q Consensus 398 ~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~ 473 (486)
+..+.+. +.+.... ....++.+.|. +.|+.+.++..+. +..++|++++ +++++|+++++
T Consensus 314 -~~~~~~~~~~~~~~~-------------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~---~~~~~i~~~l~ 376 (383)
T 3kax_A 314 -PEGSFLLWIDCSALN-------------LSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIG---CPRSVLEEILN 376 (383)
T ss_dssp -CSBSSEEEEECGGGC-------------CCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECS---SCHHHHHHHHH
T ss_pred -CCceEEEEEEccccC-------------CCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEc---CCHHHHHHHHH
Confidence 4444444 4554311 01345677776 5687544332222 3578999985 47889999999
Q ss_pred HHHHHH
Q 038818 474 VVQEKL 479 (486)
Q Consensus 474 ~l~~~~ 479 (486)
.|++++
T Consensus 377 ~l~~~l 382 (383)
T 3kax_A 377 RLRHTF 382 (383)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998764
No 66
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.92 E-value=1.9e-23 Score=209.20 Aligned_cols=331 Identities=13% Similarity=0.094 Sum_probs=210.8
Q ss_pred HHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccC
Q 038818 90 LGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGREN 169 (486)
Q Consensus 90 ~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~ 169 (486)
+.+.+...+..+...|..++...+++ +.+++++|.+. . +++++||+|+..++.+.+..
T Consensus 19 ~~~a~~~~l~~~~~~~~~~~~~~~l~----~~la~~~~~~~--------~-i~~~sGt~al~~~l~~l~~~--------- 76 (388)
T 1b9h_A 19 ERNGLVRALEQGQWWRMGGDEVNSFE----REFAAHHGAAH--------A-LAVTNGTHALELALQVMGVG--------- 76 (388)
T ss_dssp HHHHHHHHHHTSCCBTTTCSHHHHHH----HHHHHHTTCSE--------E-EEESCHHHHHHHHHHHTTCC---------
T ss_pred HHHHHHHHHHcCCeeecCCHHHHHHH----HHHHHHhCCCe--------E-EEeCCHHHHHHHHHHHcCCC---------
Confidence 33444444433222344444444444 55677777652 3 44555699998887765211
Q ss_pred CCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCc
Q 038818 170 ISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPL 249 (486)
Q Consensus 170 ~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl 249 (486)
++..|+++..+|.++..+++..|+ +++.+|++++ ++.+|+++|+++|++. +.+|+ +++++|.+.|+
T Consensus 77 -~gd~Vi~~~~~~~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~i~~~------~~~v~---~~n~tG~~~~l 142 (388)
T 1b9h_A 77 -PGTEVIVPAFTFISSSQAAQRLGA---VTVPVDVDAA-TYNLDPEAVAAAVTPR------TKVIM---PVHMAGLMADM 142 (388)
T ss_dssp -TTCEEEEESSSCTHHHHHHHHTTC---EEEEECBCTT-TCCBCHHHHHHHCCTT------EEEEC---CBCGGGCCCCH
T ss_pred -CcCEEEECCCccHHHHHHHHHcCC---EEEEEecCCC-cCCCCHHHHHHhcCcC------ceEEE---EeCCccCcCCH
Confidence 567888999999999999999999 9999999863 4789999999998643 23444 78889999999
Q ss_pred hHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchH--HHHHhcCCccc
Q 038818 250 GPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNA--LIKALSTNPEF 327 (486)
Q Consensus 250 ~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~--~~~~~~~~~~y 327 (486)
++|.++|++||+++|+|++|+.+...... . +..+..++..+++.||+++++ .+|+++.+++.. +........ +
T Consensus 143 ~~i~~la~~~~~~li~D~a~~~g~~~~~~--~-~~~~~~i~~~S~s~~K~l~g~-~~G~~~~~~~~~~~~~~~~~~~~-~ 217 (388)
T 1b9h_A 143 DALAKISADTGVPLLQDAAHAHGARWQGK--R-VGELDSIATFSFQNGKLMTAG-EGGAVVFPDGETEKYETAFLRHS-C 217 (388)
T ss_dssp HHHHHHHHHHTCCBCEECTTCTTCEETTE--E-GGGSSSCEEEECCTTSSSCSS-SCEEEEECTTCHHHHHHHHHHTB-T
T ss_pred HHHHHHHHHcCCEEEEecchhcCCccCCe--e-cccccceEEEEccCCCcccCC-CeEEEEECCHHHHHHHHHHHHHh-C
Confidence 99999999999999999999765433211 1 111224777888899999876 467777776534 332211110 0
Q ss_pred ccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC-----CC-e
Q 038818 328 LRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP-----RN-F 401 (486)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-----~~-~ 401 (486)
... .....+.......+.+...+.++..+.. .+.+++.+++..++++++.+.|+++|++++..+ +. .
T Consensus 218 -~~~----~~~~~~~~~~~g~~~~~~~~~~a~~~~~--~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~ 290 (388)
T 1b9h_A 218 -GRP----RDDRRYFHKIAGSNMRLNEFSASVLRAQ--LARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSH 290 (388)
T ss_dssp -TCC----TTCSSCCCCSCCCBCBCBHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCC
T ss_pred -CCC----ccCccceeecccccCCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccce
Confidence 000 0000000000111112333444443332 456777888888999999999999989988652 12 4
Q ss_pred eEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeE-C----------------------------CEe
Q 038818 402 AVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMV-A----------------------------GIY 452 (486)
Q Consensus 402 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~----------------------------~~~ 452 (486)
++++|.+.+.. .....++.+.|.++|+.+...... . ...
T Consensus 291 ~~~~~~~~~~~------------~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (388)
T 1b9h_A 291 YMAMFRIPGLT------------EERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSD 358 (388)
T ss_dssp SEEEEECTTCC------------HHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHH
T ss_pred EEEEEEeCCcC------------cccHHHHHHHHHHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhC
Confidence 57777765310 112456777787888854322110 0 023
Q ss_pred EEEEEecCCCC-cHHHHHHHHHHHHHHHHH
Q 038818 453 FIRFAVGATLT-EDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 453 ~lR~~~~~~~t-t~~did~~i~~l~~~~~~ 481 (486)
.+|+++. +.+ |++|||+++++|++++++
T Consensus 359 ~l~l~~~-~~~~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 359 CVWLHHR-VLLAGEPELHATAEIIADAVAR 387 (388)
T ss_dssp EEEEEGG-GGGSCHHHHHHHHHHHHHHHHH
T ss_pred eEEecCC-CCCCCHHHHHHHHHHHHHHHhh
Confidence 6999984 567 899999999999998764
No 67
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.92 E-value=3e-24 Score=218.21 Aligned_cols=356 Identities=13% Similarity=0.126 Sum_probs=222.7
Q ss_pred CCcceecCCCCCHHHHHHHHHHhhcC----CCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHH
Q 038818 74 PYYFAYFPSSGSIAGFLGEMLSSGFN----VVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEA 149 (486)
Q Consensus 74 p~~~~~~~~~~~~~~~~~~~l~~~~n----~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a 149 (486)
..|+++..+++.++.++. .+...+. .....|..++....+..++++++++++|.+.+ .+++|+|||+|
T Consensus 19 ~~~Ld~~~~~~~~~~v~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~a 90 (432)
T 3a9z_A 19 KVYMDYNATTPLEPEVIQ-AVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQ-------DIIFTSGGTES 90 (432)
T ss_dssp CEECBTTTCCCCCHHHHH-HHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGG-------GEEEESCHHHH
T ss_pred cEEeeCCccCCCCHHHHH-HHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcC-------eEEEeCChHHH
Confidence 356666544444454433 3333221 11123444455667788999999999998654 68999999999
Q ss_pred HHHHHHHHHHHHHH---Hcccc------CC-CCeEEEecCCCchHHHHHHHH----cCCCCCCeEEEecCCCCCcccCHH
Q 038818 150 ILCTLAAARDQILN---EIGRE------NI-SRLVVYGSDQTHSALQKAAQI----AGIDPKNFRAIKTTKSSSFTLTPE 215 (486)
Q Consensus 150 ~~~al~~a~~~~~~---~~~~~------~~-~~~~v~~s~~~H~s~~~a~~~----~G~g~~~v~~v~~d~~~~~~~d~~ 215 (486)
+..++.++...+.. +.|.+ +. ....|+++..+|+|+..++.. .|. +++.+|+++ +++.+|++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~---~v~~v~~~~-~~~~~d~~ 166 (432)
T 3a9z_A 91 NNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVA---EVTFVPVSK-VNGQVEVE 166 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSC---EEEEECCCT-TTSSCCHH
T ss_pred HHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCc---EEEEEecCc-ccCCcCHH
Confidence 99888877532211 11110 00 125788899999998766543 577 899999874 24689999
Q ss_pred HHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhC----------ceEEeeccccchhccCccchhhhcC
Q 038818 216 SLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYS----------IWVHVDAAYAGSACICPEFRHFIDG 285 (486)
Q Consensus 216 ~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g----------~~lhvD~a~g~~~~~~~~~~~~~~~ 285 (486)
+|++++++. +.+|+++.++|++|.+.|+++|.++|+++| +|+|+|++|+.+....+ ...
T Consensus 167 ~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~-~~~---- 235 (432)
T 3a9z_A 167 DILAAVRPT------TCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVD-VED---- 235 (432)
T ss_dssp HHHHTCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCC-HHH----
T ss_pred HHHHhccCC------ceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccC-hhh----
Confidence 999988642 458899999999999999999999999999 99999999976533221 111
Q ss_pred CCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCcccc-CCCCC-CchHHHHHHHH
Q 038818 286 IEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQIT-LSRRF-RALKLWLVLRS 363 (486)
Q Consensus 286 ~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~-~sr~~-~~l~~~~~l~~ 363 (486)
.++|+++.++||+++ |. +|+++++++... ....+.+..... . .... ++... ...++..++..
T Consensus 236 -~~~d~~~~s~~K~~g-~~-~G~~~~~~~~~~---~~~~~~~~~~~~-----~-----~~~~~~~~~~~~~~a~~aal~~ 299 (432)
T 3a9z_A 236 -LGVDFLTIVGHKFYG-PR-IGALYVRGVGKL---TPLYPMLFGGGQ-----E-----RNFRPGTENTPMIAGLGKAADL 299 (432)
T ss_dssp -HCCSEEEEEGGGTTC-CS-CEEEEETTBTTT---BCCCCSCCSSCG-----G-----GGTSCSCCCHHHHHHHHHHHHH
T ss_pred -cCCCEEEEehhHhcC-Cc-ceEEEEcccccc---CCcCceeecCCc-----c-----ccccCCCcCHHHHHHHHHHHHH
Confidence 158999999999875 66 999999865311 011111111100 0 0001 11111 11223334443
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe--cC----CCe-eEEEEEeecCCCCCCCCCCccchHHHHHHHHHHH-
Q 038818 364 FGVANLRNFLRSHVRMAQLFQELVGGDNRFEIV--AP----RNF-AVVCFRVLPSASGLGDGKANEGANELNRKLLESI- 435 (486)
Q Consensus 364 ~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~--~~----~~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l- 435 (486)
+ .++++++.++..++++++.+.|++++++++. .+ ... .+++|.+..... + ...+.+.+
T Consensus 300 ~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~--~~~~~~~l~ 365 (432)
T 3a9z_A 300 V-SENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQL-----------R--GYMVLAQCQ 365 (432)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTC-----------C--HHHHHHHCS
T ss_pred H-HhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCC-----------c--HHHHHHHhc
Confidence 3 4578889999999999999999886555442 32 122 367787764210 0 12233322
Q ss_pred ---HhcCcEEEeee------e--ECC------EeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 436 ---NASGQLYVSHG------M--VAG------IYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 436 ---~~~g~~~~~~~------~--~~~------~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
.+.|..+.... . ..| ..++|+++. ..++++|++++++.|+++++++.
T Consensus 366 ~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~-~~~t~eei~~~~~~l~~~~~~~~ 429 (432)
T 3a9z_A 366 TLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVG-RSTTRAEVDLIVQDLKQAVNQLE 429 (432)
T ss_dssp SEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECC-TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEcC-CCCCHHHHHHHHHHHHHHHHHhc
Confidence 11222110000 0 001 268999985 57788899999999999987764
No 68
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.92 E-value=4.5e-24 Score=212.44 Aligned_cols=310 Identities=13% Similarity=0.041 Sum_probs=202.1
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCC
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGID 195 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g 195 (486)
.++++.+++++|.+ .+++|+|||+|+..++.+++.. . .+++.|+++..+|+++..++...|+
T Consensus 35 ~~l~~~la~~~~~~---------~v~~~~ggt~al~~~~~~~~~~-~-------~~gd~Vl~~~~~~~~~~~~~~~~g~- 96 (375)
T 2fnu_A 35 LLFEEALCEFLGVK---------HALVFNSATSALLTLYRNFSEF-S-------ADRNEIITTPISFVATANMLLESGY- 96 (375)
T ss_dssp HHHHHHHHHHHTCS---------EEEEESCHHHHHHHHHHHSSCC-C-------TTSCEEEECSSSCTHHHHHHHHTTC-
T ss_pred HHHHHHHHHHhCCC---------eEEEeCCHHHHHHHHHHHhccc-C-------CCCCEEEECCCccHhHHHHHHHCCC-
Confidence 45667788888865 4799999999998888776210 0 0567889999999999999999999
Q ss_pred CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhcc
Q 038818 196 PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACI 275 (486)
Q Consensus 196 ~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~ 275 (486)
+++.+|++++ +.+|+++|+++++++ +.+|+++++ +|.+.|+++|.++|++||+++|+|++|+.+...
T Consensus 97 --~~~~~~~~~~--~~~d~~~l~~~i~~~------~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~ 163 (375)
T 2fnu_A 97 --TPVFAGIKND--GNIDELALEKLINER------TKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSHALGSEY 163 (375)
T ss_dssp --EEEECCBCTT--SSBCGGGSGGGCCTT------EEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEE
T ss_pred --EEEEeccCCC--CCCCHHHHHhhcCcC------ceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECccccCCeE
Confidence 9999999863 489999999888643 335566555 899999999999999999999999999765433
Q ss_pred CccchhhhcCCCCCCceeeccccccCCCCcceEEEee-CchHHHHHhcCCcccccCccCCCCCccCCCCcc-ccCCCCCC
Q 038818 276 CPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVK-NPNALIKALSTNPEFLRNKASDSKQVVDYKDWQ-ITLSRRFR 353 (486)
Q Consensus 276 ~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~-~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~-~~~sr~~~ 353 (486)
.. + .+.....++..++++||+++ | |+|+++++ +++...+.... ......+. ....+. ...+.++.
T Consensus 164 ~~--~-~~~~~~~i~~~s~s~~K~~~-~-g~g~~~~~~~~~~~~~~~~~----~~~~~~~~----~~~~~~~~~~~~~~~ 230 (375)
T 2fnu_A 164 QN--K-KVGGFALASVFSFHAIKPIT-T-AEGGAVVTNDSELHEKMKLF----RSHGMLKK----DFFEGEVKSIGHNFR 230 (375)
T ss_dssp TT--E-ETTSSSSEEEEECCTTSSSC-C-SSCEEEEESCHHHHHHHHHH----TBTTEEES----SSSCEEESSCCCBCC
T ss_pred CC--e-eccccCCeEEEeCCCCCCcc-c-cCceEEEeCCHHHHHHHHHH----HhcCCccc----cccccccccccccCC
Confidence 21 1 11112246667888889984 4 78888885 45443221111 00000000 000000 01111112
Q ss_pred chHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC-----CeeEEEEEeecCCCCCCCCCCccchHHHH
Q 038818 354 ALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR-----NFAVVCFRVLPSASGLGDGKANEGANELN 428 (486)
Q Consensus 354 ~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~ 428 (486)
...+..++.....++++++.++..++++++.+.|+++|++++..++ ...++.+.+.... . . ..
T Consensus 231 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~--~-~~ 298 (375)
T 2fnu_A 231 LNEIQSALGLSQLKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKF---------F--T-CK 298 (375)
T ss_dssp CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGG---------G--G-GH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCccc---------c--c-hH
Confidence 2233333333335678889999999999999999999899886542 1233455554210 0 0 13
Q ss_pred HHHHHHHHhcCcEEEeeee-------EC--------------CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 429 RKLLESINASGQLYVSHGM-------VA--------------GIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 429 ~~l~~~l~~~g~~~~~~~~-------~~--------------~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
..+.+.|.++|+.+..... +. ...++|+++ ++.++++|+++++++|+++++++
T Consensus 299 ~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~-~~~~t~~~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 299 KLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPC-HANLNLESVQNIAHSVLKTFESF 372 (375)
T ss_dssp HHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECC-CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecC-CCCCCHHHHHHHHHHHHHHHHHh
Confidence 4567777777864321100 00 126799998 46788889999999999988764
No 69
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.92 E-value=6e-23 Score=208.35 Aligned_cols=325 Identities=12% Similarity=0.065 Sum_probs=217.5
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCC--CCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCC
Q 038818 104 NWMSSPAATELENIVMDWLGEMLKLP--KSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQT 181 (486)
Q Consensus 104 ~~~~~~~~~~le~~~~~~l~~l~g~~--~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~ 181 (486)
.|.......++++.+.+++.+.+|.+ .+ ....++++|+++++..++.+.+. ++..|+++..+
T Consensus 78 ~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~-----~~~i~~~~G~~~ai~~~~~~~~~-----------~gd~Vl~~~p~ 141 (428)
T 1iay_A 78 NFQDYHGLPEFRKAIAKFMEKTRGGRVRFD-----PERVVMAGGATGANETIIFCLAD-----------PGDAFLVPSPY 141 (428)
T ss_dssp HCCCTTCCHHHHHHHHHHHHHHTTTCSCCC-----TTSCEEEEHHHHHHHHHHHHHCC-----------TTCEEEEESSC
T ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCCC-----hhhEEEccChHHHHHHHHHHhCC-----------CCCeEEEccCC
Confidence 34333346789999999999988843 11 12689999999999887776643 56678888899
Q ss_pred chHHHHHH-HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHH
Q 038818 182 HSALQKAA-QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAK 257 (486)
Q Consensus 182 H~s~~~a~-~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~ 257 (486)
|.++...+ ...|+ +++.+|.+.++++.+|+++|++++++....+..+.+|+++.++|++|.+.| +++|+++|+
T Consensus 142 y~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~ 218 (428)
T 1iay_A 142 YPAFNRDLRWRTGV---QLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTN 218 (428)
T ss_dssp CTTHHHHTTTTTCC---EEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred CcchHHHHHHhcCC---EEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHH
Confidence 98887754 46788 899999875445789999999999876544545667888899999999999 999999999
Q ss_pred HhCceEEeeccccchhccCcc---chhhhcC----CCCCC--ceeeccccccCCC-CcceEEEeeCchHHHHHhcCCccc
Q 038818 258 RYSIWVHVDAAYAGSACICPE---FRHFIDG----IEGAD--SFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEF 327 (486)
Q Consensus 258 ~~g~~lhvD~a~g~~~~~~~~---~~~~~~~----~~~aD--si~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y 327 (486)
+||+++++|++|+++...... ....... --..| .+..++||+++.| ..+|++++.++..... +.....+
T Consensus 219 ~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~-~~~~~~~ 297 (428)
T 1iay_A 219 QHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNC-ARKMSSF 297 (428)
T ss_dssp TTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHH-HHHHHTT
T ss_pred HCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHH-HHHHHhc
Confidence 999999999999874332111 1111110 00267 6788999999743 4579888866544332 2110000
Q ss_pred ccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhch-----HHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCee
Q 038818 328 LRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGV-----ANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFA 402 (486)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~-----~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~ 402 (486)
. ....+...++...+.. +.+++..++..++++++.+.|+++ ++++..+...+
T Consensus 298 ~----------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~ 354 (428)
T 1iay_A 298 G----------------------LVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIKCLKNNAGL 354 (428)
T ss_dssp S----------------------CCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBCCCSSSS
T ss_pred c----------------------cCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCCeeE
Confidence 0 0122333344444322 256677888889999999999887 77765433445
Q ss_pred EEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhc-CcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 403 VVCFRVLPSASGLGDGKANEGANELNRKLLESINAS-GQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 403 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
.+.+.+..... ........++.+.|.++ |+.+..+..+. +..++|+++. ..++++++++++.|++++
T Consensus 355 ~~~~~~~~~~~--------~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~--~~~~e~i~~~~~~l~~~l 424 (428)
T 1iay_A 355 FCWMDLRPLLR--------ESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFA--NMDDGTVDIALARIRRFV 424 (428)
T ss_dssp EEEEECGGGCS--------SSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECS--SSCHHHHHHHHHHHHHHH
T ss_pred EEEEechhhcC--------CCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe--cCCHHHHHHHHHHHHHHH
Confidence 56666643210 00012334677888776 87544333222 2468999985 468889999999999887
Q ss_pred HH
Q 038818 480 DG 481 (486)
Q Consensus 480 ~~ 481 (486)
++
T Consensus 425 ~~ 426 (428)
T 1iay_A 425 GV 426 (428)
T ss_dssp HT
T ss_pred hc
Confidence 53
No 70
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.92 E-value=1e-24 Score=224.54 Aligned_cols=326 Identities=11% Similarity=0.063 Sum_probs=204.3
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH
Q 038818 105 WMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA 184 (486)
Q Consensus 105 ~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s 184 (486)
|..++...++|..+++++++++|++.+. ....++.++|+++|+.++.+... +++.|+++..+|.+
T Consensus 82 y~~~~~~~~le~~~~~~~a~~~g~~~~~----~~~~V~~~sGs~an~~~~~all~-----------pGD~Vl~~~~~~~~ 146 (483)
T 1rv3_A 82 YGGTEHIDELETLCQKRALQAYGLDPQC----WGVNVQPYSGSPANFAVYTALVE-----------PHGRIMGLDLPDGG 146 (483)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTTCCTTT----EEEECCCSSHHHHHHHHHHHHTC-----------TTCEEEEECGGGTC
T ss_pred cCcchhHHHHHHHHHHHHHHHhCCCccc----CceEEEECCcHHHHHHHHHHhcC-----------CCCEEEEecCccCc
Confidence 4455667899999999999999997530 00124445555888776665432 67788888888876
Q ss_pred HHH--------HHHHcCCCCCCeEEEec--CCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHH
Q 038818 185 LQK--------AAQIAGIDPKNFRAIKT--TKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCD 254 (486)
Q Consensus 185 ~~~--------a~~~~G~g~~~v~~v~~--d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~ 254 (486)
+.. .+...|. .++.+++ ++ +++.+|+++|++++++.. |.+|++ ++++++ .+.|+++|++
T Consensus 147 ~~~~~~~~~~~~v~~~G~---~~~~v~~~~~~-~~~~iD~d~le~~i~~~~-----tklIi~-~~sn~~-~~~dl~~i~~ 215 (483)
T 1rv3_A 147 HLTHGFMTDKKKISATSI---FFESMAYKVNP-DTGYIDYDRLEENARLFH-----PKLIIA-GTSCYS-RNLDYGRLRK 215 (483)
T ss_dssp CGGGCCBCSSCBCSHHHH---HSEEEEECBCT-TTCSBCHHHHHHHHHHHC-----CSEEEE-CCSSCC-SCCCHHHHHH
T ss_pred CcchhhhhcccCcccccc---eEEEEECcccc-CCCcCCHHHHHHHHhhcC-----CcEEEE-eCCcCC-CcCCHHHHHH
Confidence 542 2334442 2444544 53 358999999999998431 346666 667766 8899999999
Q ss_pred HHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchH-HHHHhcCCcccccCccC
Q 038818 255 IAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNA-LIKALSTNPEFLRNKAS 333 (486)
Q Consensus 255 i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~-~~~~~~~~~~y~~~~~~ 333 (486)
+|+++|+++|+|+||+.+....+.....+ ..+|+++.++||++.+|.+ |+++++++.. +.........|-...
T Consensus 216 ia~~~g~~livD~ah~~g~~~~~~~~~p~---~~~div~~s~~K~l~Gprg-G~i~~~~~~~~~~~~~g~~~~y~~~~-- 289 (483)
T 1rv3_A 216 IADENGAYLMADMAHISGLVVAGVVPSPF---EHCHVVTTTTHKTLRGCRA-GMIFYRRGVRSVDPKTGKEILYNLES-- 289 (483)
T ss_dssp HHHHTTCEEEEECTTTHHHHHHTSSCCGG---GTCSEEEEESSGGGCCCSC-EEEEEECSBCC-------CCBCCHHH--
T ss_pred HHHHcCCEEEEEccchhcccccCCCCCCC---CCCcEEEecCcccCCCCCc-eEEEEcchhhhhccccCcchhhHHHH--
Confidence 99999999999999976554322211111 2689999999999999988 9999987521 000000000000000
Q ss_pred CCCCccCCC-CccccCCCCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC-CeeEEEEEeec
Q 038818 334 DSKQVVDYK-DWQITLSRRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR-NFAVVCFRVLP 410 (486)
Q Consensus 334 ~~~~~~~~~-~~~~~~sr~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~~~v~f~~~~ 410 (486)
..+.. ....+++... ...++..++.....++++++.++..++++++.+.|.+. +++++.+. ....+.+.+.+
T Consensus 290 ----~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~ 364 (483)
T 1rv3_A 290 ----LINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVEL-GYKIVTGGSDNHLILVDLRS 364 (483)
T ss_dssp ----HHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEEGGG
T ss_pred ----HhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhc-CCEeccCCCCCceEEEeccC
Confidence 00000 0000111111 12344456666656788999999999999999999988 89987643 22344444433
Q ss_pred CCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEe---eee--ECCEeEEEEEecCCCCc----HHHHHHHHHHHHHHHHH
Q 038818 411 SASGLGDGKANEGANELNRKLLESINASGQLYVS---HGM--VAGIYFIRFAVGATLTE----DRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~~~--~~~~~~lR~~~~~~~tt----~~did~~i~~l~~~~~~ 481 (486)
... + ...+.+.|.+.|+.+.. +.. ..+..++|+++.. .++ ++|++++++.|.++++.
T Consensus 365 ~g~-----------~--~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~-~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 365 KGT-----------D--GGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPA-LTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp GTC-----------C--HHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHH-HHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCC-----------C--HHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEeecCC-cccCCCCHHHHHHHHHHHHHHHHh
Confidence 210 0 22345556667764331 221 1235689999853 445 88999999999998765
No 71
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.92 E-value=1.9e-23 Score=209.40 Aligned_cols=331 Identities=11% Similarity=0.025 Sum_probs=219.5
Q ss_pred HHHHHHHHhhcCCCccccccChhhHH-HHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcc
Q 038818 88 GFLGEMLSSGFNVVGFNWMSSPAATE-LENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIG 166 (486)
Q Consensus 88 ~~~~~~l~~~~n~~~~~~~~~~~~~~-le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 166 (486)
..+.+.+...++.....|... ..+ +++.+.+++.+.+|++.+ ....++|+||++++..++.+...
T Consensus 44 ~~v~~a~~~~~~~~~~~y~~~--~~~~lr~~la~~l~~~~g~~~~-----~~~v~~t~g~~~al~~~~~~l~~------- 109 (390)
T 1d2f_A 44 PCIIEALNQRLMHGVFGYSRW--KNDEFLAAIAHWFSTQHYTAID-----SQTVVYGPSVIYMVSELIRQWSE------- 109 (390)
T ss_dssp HHHHHHHHHHHTTCCCCCCCS--CCHHHHHHHHHHHHHHSCCCCC-----GGGEEEESCHHHHHHHHHHHSSC-------
T ss_pred HHHHHHHHHHHhCCCCCCCCC--ChHHHHHHHHHHHHHhcCCCCC-----HHHEEEcCCHHHHHHHHHHHhcC-------
Confidence 345555555554433344433 567 889999999998885322 12689999999999877776532
Q ss_pred ccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCC-CCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 167 RENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKS-SSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 167 ~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~-~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
+++.|++...+|.++..+++..|. +++.+|++++ +++.+|+++|++++++. .+.+|+++.++|++|.
T Consensus 110 ----~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~l~~p~nptG~ 177 (390)
T 1d2f_A 110 ----TGEGVVIHTPAYDAFYKAIEGNQR---TVMPVALEKQADGWFCDMGKLEAVLAKP-----ECKIMLLCSPQNPTGK 177 (390)
T ss_dssp ----TTCEEEEEESCCHHHHHHHHHTTC---EEEEEECEECSSSEECCHHHHHHHHTST-----TEEEEEEESSCTTTCC
T ss_pred ----CCCEEEEcCCCcHHHHHHHHHCCC---EEEEeecccCCCccccCHHHHHHHhccC-----CCeEEEEeCCCCCCCc
Confidence 566788888999999999999999 9999998753 24679999999998641 2456777899999999
Q ss_pred cCC---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCC-CC-CceeeccccccC-CCCcceEEEeeCchHHHH
Q 038818 246 VDP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIE-GA-DSFSLNAHKWFF-TTLDCCCLWVKNPNALIK 319 (486)
Q Consensus 246 idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~-~a-Dsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~ 319 (486)
+-| +++|+++|++||+++++|++|+.+......... +..+. .. |. ..+++|+++ ....+|+++++++.....
T Consensus 178 ~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~~ 255 (390)
T 1d2f_A 178 VWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIP-WSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENSSSRDA 255 (390)
T ss_dssp CCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCC-GGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcC-HHHcchhhHhh-ccCccHhhcccChhheEEEECCHHHHHH
Confidence 966 889999999999999999999875432111111 11121 22 55 888999997 444579998876544332
Q ss_pred HhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEe
Q 038818 320 ALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGG-DNRFEIV 396 (486)
Q Consensus 320 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~ 396 (486)
......... +.. ....+..+++...+ +.+.+++..++..++++++.+.|++ +|++++.
T Consensus 256 ~~~~~~~~~----------------~~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 316 (390)
T 1d2f_A 256 YLSALKGRD----------------GLS---SPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQ 316 (390)
T ss_dssp HHHHHHTTS----------------CCC---SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCC
T ss_pred HHHHHhhhc----------------ccC---CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEe
Confidence 111000000 000 11223333333332 3566788888889999999999988 7888765
Q ss_pred cCCCeeEE-EEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHH
Q 038818 397 APRNFAVV-CFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAW 472 (486)
Q Consensus 397 ~~~~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i 472 (486)
++..+.+ .+.+.... . + ..++.+.|. +.|+.+..+..+. +..++|++++. ++++|++++
T Consensus 317 -~~~~~~~~~~~~~~~~---------~--~--~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~---~~~~l~~~l 379 (390)
T 1d2f_A 317 -IPQSTYLAWLDLRPLN---------I--D--DNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC---PRSKLEKGV 379 (390)
T ss_dssp -CCSBCSEEEEECGGGC---------C--C--HHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS---CHHHHHHHH
T ss_pred -cCCccEEEEEEccccC---------C--C--HHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC---CHHHHHHHH
Confidence 4444554 35554210 0 1 245677777 5687544433222 34689999864 467999999
Q ss_pred HHHHHHHHHH
Q 038818 473 KVVQEKLDGI 482 (486)
Q Consensus 473 ~~l~~~~~~l 482 (486)
+.|.++++++
T Consensus 380 ~~l~~~l~~~ 389 (390)
T 1d2f_A 380 AGLINAIRAV 389 (390)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999988764
No 72
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.92 E-value=1e-23 Score=226.58 Aligned_cols=316 Identities=12% Similarity=0.070 Sum_probs=211.9
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCC
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGID 195 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g 195 (486)
.+..+.+++++|.+. ..++++|+|+||..++.+... +++.|+++..+|.|+..++...|+
T Consensus 208 ~~~ee~la~l~G~d~--------~i~~~~Gtt~a~~~~i~al~~-----------~GD~Vlv~~~~h~s~~~~~~~~G~- 267 (755)
T 2vyc_A 208 GESEKYAARVFGADR--------SWSVVVGTSGSNRTIMQACMT-----------DNDVVVVDRNCHKSIEQGLMLTGA- 267 (755)
T ss_dssp HHHHHHHHHHHTCSE--------EEEESSHHHHHHHHHHHHHCC-----------TTCEEEEESSCCHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHhCCCc--------eEEECCcHHHHHHHHHHHhcC-----------CCCEEEECCCchHHHHHHHHHcCC-
Confidence 345688999999864 457788878888877776643 677899999999999999999999
Q ss_pred CCCeEEEecCCCC---Cccc-----CHHHHHHHHHHH--H--HCCCccEEEEeecCCccccccCCchHHHHHHHHhCceE
Q 038818 196 PKNFRAIKTTKSS---SFTL-----TPESLQAAIDLD--I--QAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWV 263 (486)
Q Consensus 196 ~~~v~~v~~d~~~---~~~~-----d~~~L~~~l~~~--~--~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~l 263 (486)
+++.++.+.++ .+.+ |+++|+++|++. + +.+..|.+|+++.+ |++|.+.|+++|+++|++||+++
T Consensus 268 --~~v~v~~~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~l 344 (755)
T 2vyc_A 268 --KPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRL 344 (755)
T ss_dssp --EEEEECCCBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEE
T ss_pred --EEEEEeCCCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEE
Confidence 99999876421 1245 999999999863 2 24555667777876 68999999999999999999999
Q ss_pred EeeccccchhccCccchhhhcCCCC--CCc------eeeccccccCCCCcceEEEeeCc--hHHHHHhcCCcccccCccC
Q 038818 264 HVDAAYAGSACICPEFRHFIDGIEG--ADS------FSLNAHKWFFTTLDCCCLWVKNP--NALIKALSTNPEFLRNKAS 333 (486)
Q Consensus 264 hvD~a~g~~~~~~~~~~~~~~~~~~--aDs------i~~~~hK~l~~p~~~g~~~~~~~--~~~~~~~~~~~~y~~~~~~ 333 (486)
|||+||+++..+.+.++... .+.+ +|. ++.++||++++|.++|+++++++ ..-...+.......
T Consensus 345 ivDeA~~~~~~~~~~~~~~~-~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~~~~~~----- 418 (755)
T 2vyc_A 345 HFDEAWYGYARFNPIYADHY-AMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMH----- 418 (755)
T ss_dssp EEECTTCTTGGGCGGGTTSS-SSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHHHHHHHHHHT-----
T ss_pred EEECcCchhcccCcccCCcc-hhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHHHHHHHHHHh-----
Confidence 99999987655544332111 1124 677 99999999999999999999875 11000110000000
Q ss_pred CCCCccCCCCccccCCCC--CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCC---------eEEecCCCe-
Q 038818 334 DSKQVVDYKDWQITLSRR--FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNR---------FEIVAPRNF- 401 (486)
Q Consensus 334 ~~~~~~~~~~~~~~~sr~--~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~---------~~~~~~~~~- 401 (486)
+.+.. ....++-.+++.+..+|..+++++..++++++++.|+++++ |+++.++..
T Consensus 419 -------------~s~sp~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~ 485 (755)
T 2vyc_A 419 -------------ATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVT 485 (755)
T ss_dssp -------------SCSSCCHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEE
T ss_pred -------------CCCCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhcc
Confidence 01111 11233444556565565577899999999999999988777 777654321
Q ss_pred ------------------------------------------------eEEEEEeecCCCCCCCCCCccchHHHHHHHHH
Q 038818 402 ------------------------------------------------AVVCFRVLPSASGLGDGKANEGANELNRKLLE 433 (486)
Q Consensus 402 ------------------------------------------------~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~ 433 (486)
..++|...+.+. ++ +.++.+.-...+.+
T Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~---~G-~~~~~g~~~~~l~~ 561 (755)
T 2vyc_A 486 DPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGE---DG-ELEETGVPAALVTA 561 (755)
T ss_dssp CTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCT---TS-SBCSSCCCHHHHHH
T ss_pred ccccccccccccccchhccchhhhhccCcccccccccccCCCccccCCeEEEEEcCCCCC---CC-CccccCCcHHHHHH
Confidence 234454432110 00 00000111234555
Q ss_pred HHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 434 SINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 434 ~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
.|.+.|+. +.. .+...+|+++ ++.+|++++++++++|.++.+..
T Consensus 562 ~L~~~gI~-~e~---~~~~~v~~~~-~~g~t~~~~~~l~~al~~~~~~~ 605 (755)
T 2vyc_A 562 WLGRHGIV-PTR---TTDFQIMFLF-SMGVTRGKWGTLVNTLCSFKRHY 605 (755)
T ss_dssp HHHTTTCC-CSE---ECSSEEEEEC-CTTCCTTTTHHHHHHHHHHHHHH
T ss_pred HHHHCCCE-Eee---cCCCeEEEEE-CCCCCHHHHHHHHHHHHHHHHhh
Confidence 66666753 221 2456789988 57889999999999999987654
No 73
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.92 E-value=8.9e-24 Score=214.43 Aligned_cols=340 Identities=12% Similarity=0.055 Sum_probs=220.8
Q ss_pred HHHHHHHHHhhcCCC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHc
Q 038818 87 AGFLGEMLSSGFNVV-GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEI 165 (486)
Q Consensus 87 ~~~~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~ 165 (486)
+..+.+.+...+... ...|...+...++++.+.+++.+. |.+.. ....++|+|||+|+..++...+.
T Consensus 73 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~~~~~-----~~~v~~t~g~t~al~~~~~~l~~------ 140 (427)
T 3dyd_A 73 DPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCP-EAPLE-----AKDVILTSGCSQAIDLCLAVLAN------ 140 (427)
T ss_dssp CHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBT-TBCCC-----GGGEEEESSHHHHHHHHHHHHCC------
T ss_pred CHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhc-CCCCC-----hHHEEEecCcHHHHHHHHHHhcC------
Confidence 334444444444322 234544455666776665555443 33221 12789999999999888777643
Q ss_pred cccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 166 GRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 166 ~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
++..|+++..+|..+...++..|+ +++.+|.++.+++.+|+++|++++++. +.+|+++.++|++|.
T Consensus 141 -----~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~ 206 (427)
T 3dyd_A 141 -----PGQNILVPRPGFSLYKTLAESMGI---EVKLYNLLPEKSWEIDLKQLEYLIDEK------TACLIVNNPSNPCGS 206 (427)
T ss_dssp -----TTCEEEEEESCCTHHHHHHHHTTC---EEEEEEEEGGGTTEECHHHHHSSCCTT------EEEEEEESSCTTTCC
T ss_pred -----CCCEEEEcCCCchhHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHhccC------CCEEEEECCCCCCCC
Confidence 567788888999999999999999 999999875446789999999988653 347888889999999
Q ss_pred cCC---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCC-CCCC-ceeeccccccCCC-CcceEEEeeCc-----
Q 038818 246 VDP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGI-EGAD-SFSLNAHKWFFTT-LDCCCLWVKNP----- 314 (486)
Q Consensus 246 idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~-~~aD-si~~~~hK~l~~p-~~~g~~~~~~~----- 314 (486)
+-| +++|+++|++||+++++|++|+++......+... ..+ ...+ .++.+++|.++.| ..+|+++++++
T Consensus 207 ~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~-~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~ 285 (427)
T 3dyd_A 207 VFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPL-ATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFG 285 (427)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCG-GGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSH
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccH-HHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhH
Confidence 999 9999999999999999999998754322111111 111 1222 3455899986543 45899988864
Q ss_pred hHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Q 038818 315 NALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFE 394 (486)
Q Consensus 315 ~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 394 (486)
..+...+......... .......++..++.....+++.++.++..++++++.+.|+++|+++
T Consensus 286 ~~i~~~l~~~~~~~~~------------------~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 347 (427)
T 3dyd_A 286 NEIRDGLVKLSQRILG------------------PCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLR 347 (427)
T ss_dssp HHHHHHHHHHHHHHCC------------------SCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEE
T ss_pred HHHHHHHHHHHhccCC------------------CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 1121111100000000 0001122333344434467788899999999999999999999998
Q ss_pred EecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHH
Q 038818 395 IVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWK 473 (486)
Q Consensus 395 ~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~ 473 (486)
+..+.....+.+.+.....+ + .. ...++.+++. +.|+++.++..+...+++|+++. +++++|+++++
T Consensus 348 ~~~p~~g~~~~~~l~~~~~~--~---~~----~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~---~~~e~i~~~l~ 415 (427)
T 3dyd_A 348 PVRPSGAMYLMVGIEMEHFP--E---FE----NDVEFTERLVAEQSVHCLPATCFEYPNFIRVVIT---VPEVMMLEACS 415 (427)
T ss_dssp EECCSBTTEEEEEECGGGCT--T---CS----SHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESC---SCHHHHHHHHH
T ss_pred ecCCCeeEEEEEecCHhhcC--C---CC----CHHHHHHHHHHHCCEEEECCcccCCCCeEEEEEC---CCHHHHHHHHH
Confidence 77554444455555421100 0 00 1234555554 66876555444445678999974 57889999999
Q ss_pred HHHHHHHHHh
Q 038818 474 VVQEKLDGIL 483 (486)
Q Consensus 474 ~l~~~~~~l~ 483 (486)
.|.++++++.
T Consensus 416 ~l~~~l~~~~ 425 (427)
T 3dyd_A 416 RIQEFCEQHY 425 (427)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhh
Confidence 9999987754
No 74
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.92 E-value=7.1e-23 Score=208.92 Aligned_cols=335 Identities=13% Similarity=0.086 Sum_probs=221.6
Q ss_pred HHHHHHHHHhhcCCC---ccccccChhhHHHHHHHHHHHHHHcCCC-CCCccCCCcceEEcCCchHHHHHHHHHHHHHHH
Q 038818 87 AGFLGEMLSSGFNVV---GFNWMSSPAATELENIVMDWLGEMLKLP-KSFLFSGTGGGVIQGTTCEAILCTLAAARDQIL 162 (486)
Q Consensus 87 ~~~~~~~l~~~~n~~---~~~~~~~~~~~~le~~~~~~l~~l~g~~-~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~ 162 (486)
+..+.+.+...+... ...|...+...++++.+.+++.+.+|.+ .+ .+++|+||++|+..++.+..+
T Consensus 93 ~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-------~v~~t~G~~~al~~~~~~l~~--- 162 (448)
T 3aow_A 93 KEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGISQDN-------DIMITSGSQQALDLIGRVFLN--- 162 (448)
T ss_dssp HHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCTTS-------EEEEESSHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcCChh-------hEEEeCcHHHHHHHHHHHHcC---
Confidence 344555555444322 1345545567889999989988888984 32 789999999999888777643
Q ss_pred HHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEE-EeecCCc
Q 038818 163 NEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFL-CATVGTT 241 (486)
Q Consensus 163 ~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~v-v~~~gtt 241 (486)
+++.|++...+|.++..+++..|. +++.+|.++ + .+|+++|+++|+.....+..+.+| +.+.++|
T Consensus 163 --------~Gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~--~-g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~N 228 (448)
T 3aow_A 163 --------PGDIVVVEAPTYLAALQAFNFYEP---QYIQIPLDD--E-GMKVEILEEKLKELKSQGKKVKVVYTVPTFQN 228 (448)
T ss_dssp --------TTCEEEEEESCCHHHHHHHHTTCC---EEEEEEEET--T-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCT
T ss_pred --------CCCEEEEeCCChHHHHHHHHHcCC---EEEEeccCC--C-CCCHHHHHHHHhhhhccCCCCeEEEECCCCCC
Confidence 567788898999999999999999 999999975 3 399999999997332222235565 5678899
Q ss_pred cccccCC---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCC--CCCCceeeccccccCCCCcceEEEeeCchH
Q 038818 242 AITTVDP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGI--EGADSFSLNAHKWFFTTLDCCCLWVKNPNA 316 (486)
Q Consensus 242 ~~G~idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~--~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~ 316 (486)
++|.+-| +++|+++|++||+++++|++|+.+......... +..+ .+.+.+..+++|+++....+|+++.++ +.
T Consensus 229 PtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~-~~~~~~~~~vi~~~S~SK~~~~GlriG~v~~~~-~l 306 (448)
T 3aow_A 229 PAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKK-IKALDNEGRVIYLGTFSKILAPGFRIGWMVGDP-GI 306 (448)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCC-TGGGCTTSCEEEEEESTTTTCGGGCCEEEEECH-HH
T ss_pred CcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcC-HHhcCCCCCEEEEccchhhccccccEEEEEeCH-HH
Confidence 9999866 579999999999999999999775432111111 1111 134567778899998333589988864 33
Q ss_pred HHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--c--hHHHHHHHHHHHHHHHHHHHHHhC-CC
Q 038818 317 LIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--G--VANLRNFLRSHVRMAQLFQELVGG-DN 391 (486)
Q Consensus 317 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g--~~g~~~~~~~~~~~a~~l~~~L~~-~~ 391 (486)
..........+.. + ...+..+++...+ + .+.++++.++..++++++.+.|++ +|
T Consensus 307 ~~~l~~~~~~~~~------------------~---~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 365 (448)
T 3aow_A 307 IRKMEIAKQSTDL------------------C---TNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMP 365 (448)
T ss_dssp HHHHHHHHHHHHS------------------S---CCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhcC------------------C---CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 2221110000000 0 1223333333333 2 244666677777889999999986 57
Q ss_pred -CeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeE----CCEeEEEEEecCCCCcHH
Q 038818 392 -RFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMV----AGIYFIRFAVGATLTEDR 466 (486)
Q Consensus 392 -~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~~~~~lR~~~~~~~tt~~ 466 (486)
++++..+.....+.+.+.... + ..++.+++.++|+.+..+..+ .+..++|+++.. .+++
T Consensus 366 ~g~~~~~p~~g~~~~v~~~~~~------------~--~~~l~~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~~--~~~e 429 (448)
T 3aow_A 366 EGVKWTKPEGGMFIWVTLPDGI------------D--SKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTY--VDED 429 (448)
T ss_dssp TTCEECCCSBSSEEEEECSTTC------------C--HHHHHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSS--SCTH
T ss_pred CCeEEeCCCccEEEEEEcCCCC------------C--HHHHHHHHHHCCcEEEcchhhcCCCCCCCEEEEEeCC--CCHH
Confidence 688764444445555654210 1 245677777788765544333 235789999854 3677
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 038818 467 HVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 467 did~~i~~l~~~~~~l~~ 484 (486)
+|+++++.|.++++++.+
T Consensus 430 ~i~~~~~~L~~~l~~~~~ 447 (448)
T 3aow_A 430 KIMEGIKRLAETIKEELK 447 (448)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999987764
No 75
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.92 E-value=1.7e-23 Score=212.21 Aligned_cols=336 Identities=11% Similarity=0.041 Sum_probs=220.5
Q ss_pred HHHHHHHHHhhcCCC---ccccccChhhHHHHHHHHHHHHHHcCCC-CCCccCCCcceEEcCCchHHHHHHHHHHHHHHH
Q 038818 87 AGFLGEMLSSGFNVV---GFNWMSSPAATELENIVMDWLGEMLKLP-KSFLFSGTGGGVIQGTTCEAILCTLAAARDQIL 162 (486)
Q Consensus 87 ~~~~~~~l~~~~n~~---~~~~~~~~~~~~le~~~~~~l~~l~g~~-~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~ 162 (486)
+..+.+.+...+..+ ...|...+...++++.+.+++.+.+|++ .. ....++|+||++++..++.+...
T Consensus 60 ~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~-----~~~v~~t~G~~~al~~~~~~l~~--- 131 (425)
T 1vp4_A 60 RKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLD-----EDNLIFTVGSQQALDLIGKLFLD--- 131 (425)
T ss_dssp HHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCC-----GGGEEEEEHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCC-----cccEEEeccHHHHHHHHHHHhCC---
Confidence 344555555544322 1344444457889999999998888854 21 12789999999999877776532
Q ss_pred HHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHC--CCccEEE-EeecC
Q 038818 163 NEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQA--GLIPLFL-CATVG 239 (486)
Q Consensus 163 ~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~--g~~p~~v-v~~~g 239 (486)
+++.|++...+|.++..+++..|. +++.+|+++ + .+|+++|+++|++..++ +..+.+| +.+.+
T Consensus 132 --------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~--~-~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~ 197 (425)
T 1vp4_A 132 --------DESYCVLDDPAYLGAINAFRQYLA---NFVVVPLED--D-GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNF 197 (425)
T ss_dssp --------TTCEEEEEESCCHHHHHHHHTTTC---EEEEEEEET--T-EECHHHHHHHHHHHHHTTCGGGEEEEEEECSS
T ss_pred --------CCCEEEEeCCCcHHHHHHHHHcCC---EEEEeccCC--C-CCCHHHHHHHHHhhhhcccCCCceEEEECCCC
Confidence 566788888999999999999999 999999875 3 39999999999863221 1124555 57789
Q ss_pred CccccccCC---chHHHHHHHHhCceEEeeccccchhccCc---cchhhhcCCCCCCceeeccccccCCCCcceEEEeeC
Q 038818 240 TTAITTVDP---LGPLCDIAKRYSIWVHVDAAYAGSACICP---EFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKN 313 (486)
Q Consensus 240 tt~~G~idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~---~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~ 313 (486)
+|++|.+-| +++|+++|++||+++++|++|+.+..... .... +. ....+.+..+++|+++....+|++++++
T Consensus 198 ~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~-~~-~~~~~i~~~s~sK~~~~G~r~G~~~~~~ 275 (425)
T 1vp4_A 198 HNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFK-IG-GPERVVLLNTFSKVLAPGLRIGMVAGSK 275 (425)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHH-HH-CTTTEEEEEESTTTTCGGGCEEEEECCH
T ss_pred CCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHH-hC-CCCCEEEEeccccccccccceEEEeeCH
Confidence 999999966 67899999999999999999987543111 1111 11 1234567889999998334578888863
Q ss_pred chHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhc----hHHHHHHHHHHHHHHHHHHHHHhC
Q 038818 314 PNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFG----VANLRNFLRSHVRMAQLFQELVGG 389 (486)
Q Consensus 314 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g----~~g~~~~~~~~~~~a~~l~~~L~~ 389 (486)
+...........+. . ....+..+++...+. .+.++++.++..++++++.+.|++
T Consensus 276 -~~~~~l~~~~~~~~-------------------~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 333 (425)
T 1vp4_A 276 -EFIRKIVQAKQSAD-------------------L--CSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEE 333 (425)
T ss_dssp -HHHHHHHHHHHHHH-------------------S--SCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHhhhhc-------------------C--CCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33322111000000 0 012333444444332 345667777788889999999976
Q ss_pred C-C---CeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeE----CCEeEEEEEecCC
Q 038818 390 D-N---RFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMV----AGIYFIRFAVGAT 461 (486)
Q Consensus 390 ~-~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~~~~~lR~~~~~~ 461 (486)
. | ++++..+.....+.+.+.... . ..++.+.|.++|+.+..+..+ .+..++|+++..
T Consensus 334 ~~~~~~g~~~~~~~~g~~~~~~~~~~~----------~----~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~- 398 (425)
T 1vp4_A 334 YFSDIPGVKWVKSEGGLFIWLTLPEGF----------D----TWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCL- 398 (425)
T ss_dssp HSTTSTTCEECCCSBSSEEEEECCTTC----------C----TTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSS-
T ss_pred hCCCCCceEEecCCccEEEEEEcCCCC----------C----HHHHHHHHHHCCCEEECchhhcCCCCCCCeEEEEeCC-
Confidence 3 5 688765544556666664310 0 123555666668754443323 135789999964
Q ss_pred CCcHHHHHHHHHHHHHHHHHHhh
Q 038818 462 LTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 462 ~tt~~did~~i~~l~~~~~~l~~ 484 (486)
.++++++++++.|+++++++.+
T Consensus 399 -~~~e~i~~~l~~l~~~l~~~~~ 420 (425)
T 1vp4_A 399 -PPDEKIVEGIKRLREVVLEYGK 420 (425)
T ss_dssp -SCHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHHHHHHh
Confidence 3788999999999999887654
No 76
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.92 E-value=1.7e-23 Score=210.18 Aligned_cols=301 Identities=11% Similarity=0.032 Sum_probs=209.2
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHH
Q 038818 110 AATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAA 189 (486)
Q Consensus 110 ~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~ 189 (486)
....+..++.+++++++|.+ .+++|+|||+|+..++.++.. +++.|+++..+|.+...++
T Consensus 85 g~~~~~~~l~~~la~~~g~~---------~v~~~~ggt~a~~~~~~~~~~-----------~gd~V~~~~p~~~~~~~~~ 144 (398)
T 3a2b_A 85 GTLDIHVELEEKLSAYVGKE---------AAILFSTGFQSNLGPLSCLMG-----------RNDYILLDERDHASIIDGS 144 (398)
T ss_dssp CCCHHHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHHSSC-----------TTCEEEEETTCCHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEECCccCHHHHHHH
Confidence 34577788999999999863 579999999999888777643 5678889999999999999
Q ss_pred HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccc
Q 038818 190 QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 190 ~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
+..|. +++.+|. +|+++|++++++... ..+.+|+++.++|++|.+.|+++|.++|++||+++++|++|
T Consensus 145 ~~~g~---~~~~v~~-------~d~~~l~~~l~~~~~--~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~ 212 (398)
T 3a2b_A 145 RLSFS---KVIKYGH-------NNMEDLRAKLSRLPE--DSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAH 212 (398)
T ss_dssp HHSSS---EEEEECT-------TCHHHHHHHHHTSCS--SSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTT
T ss_pred HHcCC---ceEEeCC-------CCHHHHHHHHHhhcc--CCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCC
Confidence 99999 8888874 589999999875311 13567888999999999999999999999999999999999
Q ss_pred cchhccCccchhh--hcCC-CCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccc
Q 038818 270 AGSACICPEFRHF--IDGI-EGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQI 346 (486)
Q Consensus 270 g~~~~~~~~~~~~--~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 346 (486)
+.+... ...... ..++ +++|.++.++||+++ |.| |+++.++ +...........+...
T Consensus 213 ~~~~~~-~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~G-G~~~~~~-~~~~~l~~~~~~~~~~---------------- 272 (398)
T 3a2b_A 213 SLGVIG-HKGAGTASHFGLNDDVDLIMGTFSKSLA-SLG-GFVAGDA-DVIDFLKHNARSVMFS---------------- 272 (398)
T ss_dssp TTTTSS-GGGCCHHHHHTCGGGCSEEEEESSSTTC-SSC-EEEEECH-HHHHHHHHHCHHHHSS----------------
T ss_pred cccccC-CCCCchHhhcCCCcCCeEEEeccccccc-CCC-cEEEeCH-HHHHHHHHhcccceec----------------
Confidence 755321 111111 1122 247999999999998 555 8877753 3332221111111110
Q ss_pred cCCCCCCch-HHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchH
Q 038818 347 TLSRRFRAL-KLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGAN 425 (486)
Q Consensus 347 ~~sr~~~~l-~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~ 425 (486)
++-..... .+..+++.+ +.++++.++..++++++.+.|+++ ++++. ++..+++.+.+.. +
T Consensus 273 -~~~~~~~~a~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~~~~~~~--------------~ 333 (398)
T 3a2b_A 273 -ASMTPASVASTLKALEII--QNEPEHIEKLWKNTDYAKAQLLDH-GFDLG-ATESPILPIFIRS--------------N 333 (398)
T ss_dssp -BCCCHHHHHHHHHHHHHH--HHCTHHHHHHHHHHHHHHHHHHHT-TCCBC-SCCSSEEEEECCC--------------H
T ss_pred -CCCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHhc-CCCcC-CCCCCEEEEEcCC--------------H
Confidence 00011111 223344432 335577888889999999999887 77765 4455666666532 2
Q ss_pred HHHHHHHHHHHhcCcEEEeeeeE---CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 426 ELNRKLLESINASGQLYVSHGMV---AGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 426 ~~~~~l~~~l~~~g~~~~~~~~~---~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
....++.+.|.++|+.+.....+ .+..++|+++. ..+++++++++++.|+++++++
T Consensus 334 ~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRis~~-~~~~~e~i~~~~~~l~~~l~~~ 392 (398)
T 3a2b_A 334 EKTFWVTKMLQDDGVFVNPVVSPAVPAEESLIRFSLM-ATHTYDQIDEAIEKMVKVFKQA 392 (398)
T ss_dssp HHHHHHHHHHHHTTEECEEECTTTSCGGGCEEEEECC-TTCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCcEEEeeCCCCCCCCCceEEEEEe-CCCCHHHHHHHHHHHHHHHHHh
Confidence 23456778888888754333221 13578999985 4568889999999999988765
No 77
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.92 E-value=4.9e-25 Score=218.90 Aligned_cols=306 Identities=12% Similarity=0.001 Sum_probs=195.6
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEE-cCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH
Q 038818 108 SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVI-QGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ 186 (486)
Q Consensus 108 ~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~-t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 186 (486)
++.+.++-.++++.+++++|.+++. ..+| |+|||+++..++..... +++.+++....|++.
T Consensus 67 ~~~~~~~~~~ar~~la~ll~~~~~~------evif~t~~~T~a~n~ai~~l~~-----------~gd~v~~~~~~~~~~- 128 (386)
T 3qm2_A 67 GKEFIQVAEEAEQDFRDLLNIPSNY------KVLFCHGGGRGQFAGVPLNLLG-----------DKTTADYVDAGYWAA- 128 (386)
T ss_dssp ------CCHHHHHHHHHHHTCCTTE------EEEEEESCTTHHHHHHHHHHCT-----------TCCEEEEEESSHHHH-
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCCchHHHHHHHHhccC-----------CCCeEEEEeCCHHHH-
Confidence 4555666778999999999997532 5777 79999999877665422 233333333455553
Q ss_pred HHHHHcC-CCCCCeEEEecC--CCCCcc-cCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc-CCchHHHHHHHHhCc
Q 038818 187 KAAQIAG-IDPKNFRAIKTT--KSSSFT-LTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV-DPLGPLCDIAKRYSI 261 (486)
Q Consensus 187 ~a~~~~G-~g~~~v~~v~~d--~~~~~~-~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i-dpl~~I~~i~~~~g~ 261 (486)
++...+. .| ++..+|++ + .+. +++++++++|++++ .+|.+++.+|.+|.+ +||++|+ +|+
T Consensus 129 ~~~~~a~~~G--~v~~v~~~~~~--~G~~~~~~~~~~~l~~~t------~lV~~~h~et~tG~~i~pi~~i~-----~g~ 193 (386)
T 3qm2_A 129 SAIKEAKKYC--APQIIDAKITV--DGKRAVKPMREWQLSDNA------AYLHYCPNETIDGIAIDETPDFG-----PEV 193 (386)
T ss_dssp HHHHHHTTTS--EEEEEECEEEE--TTEEEECCGGGCCCCTTC------SCEEECSEETTTTEECCCCCCCC-----TTC
T ss_pred HHHHHHHHhC--CeEEEecCccc--CCCCCCchHHHhhcCCCC------cEEEEECCcCCcCEecCchhhhc-----CCC
Confidence 2222222 23 58888887 3 234 78888887776544 368899999999995 9999996 799
Q ss_pred eEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCC
Q 038818 262 WVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDY 341 (486)
Q Consensus 262 ~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 341 (486)
++|||++++.+....+- ...|.+++++|||++ |.|+|+++++++.. .+.....+.++..... ...
T Consensus 194 ~~~vDa~qs~g~~pidv--------~~~~~~~~s~hK~lG-P~G~g~l~v~~~~~-~~~~~~~p~~~~~~~~-----~~~ 258 (386)
T 3qm2_A 194 VVTADFSSTILSAPLDV--------SRYGVIYAGAQKNIG-PAGLTLVIVREDLL-GKAHESCPSILDYTVL-----NDN 258 (386)
T ss_dssp CEEEECTTTTTSSCCCG--------GGCSEEEEETTTTTC-CTTEEEEEEEGGGC-SCCCTTSCGGGCHHHH-----HHC
T ss_pred EEEEEcccccCCCCCCc--------cccCEEEEecccccC-CCccEEEEECHHHH-hhhcccCCcHHHHHHH-----hhc
Confidence 99999999887766542 133567899999995 99999999997642 1111111222110000 000
Q ss_pred CCccccCCCC-CCchHHHHHHHHhchH-HHHHHHHHHHHHHHHHHHHHhCCCCe-EEecCC--Ce-eEEEEEeecCCCCC
Q 038818 342 KDWQITLSRR-FRALKLWLVLRSFGVA-NLRNFLRSHVRMAQLFQELVGGDNRF-EIVAPR--NF-AVVCFRVLPSASGL 415 (486)
Q Consensus 342 ~~~~~~~sr~-~~~l~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~~~-~~~~~~--~~-~~v~f~~~~~~~~~ 415 (486)
. .. ..+-. +...++-.+++.+-.. |++++.++..++++++++.|+++ ++ ....++ .+ .+++|.+.+..
T Consensus 259 ~-~~-~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~-~~~~~~~~~~~rs~~iv~f~~~~~~--- 332 (386)
T 3qm2_A 259 D-SM-FNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNS-DFYRNDVAQANRSRMNVPFQLADNT--- 332 (386)
T ss_dssp ---------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTC-SSEECCBCGGGBCSSEEEEEESSGG---
T ss_pred C-CC-CCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCHHHcCceEEEEECCCcc---
Confidence 0 00 00111 2234566677776666 89999999999999999999988 55 322222 23 58899886421
Q ss_pred CCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 416 GDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 416 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
....+...+.+.|+....+ ....+.+|+|+. ..+|++|||++++.|+++.++
T Consensus 333 -----------~~~~~~~~L~~~gI~~~~g--~~~~~~iRiS~~-~~~t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 333 -----------LDKVFLEESFAAGLHALKG--HRVVGGMRASIY-NAMPIEGVKALTDFMIDFERR 384 (386)
T ss_dssp -----------GHHHHHHHHHHTTEECCBC--CTTTCSEEEECC-TTSCHHHHHHHHHHHHHHHHH
T ss_pred -----------ccHHHHHHHHHCCCEEeCC--CCCcCeEEEEcC-CCCCHHHHHHHHHHHHHHHHh
Confidence 1134555677778643222 121245999985 577888999999999998765
No 78
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.92 E-value=1.8e-23 Score=212.64 Aligned_cols=343 Identities=12% Similarity=0.034 Sum_probs=219.5
Q ss_pred HHHHHHhhcCCCc-cccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHH--HHHHHHcc
Q 038818 90 LGEMLSSGFNVVG-FNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAAR--DQILNEIG 166 (486)
Q Consensus 90 ~~~~l~~~~n~~~-~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~--~~~~~~~~ 166 (486)
+.+.+...+.... ..|.......++++.+.+++.+.+|++.. ....++|+|||+++..++.+.. .
T Consensus 62 v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~-----~~~i~~t~g~t~al~~~~~~l~~~~------- 129 (437)
T 3g0t_A 62 GIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIP-----ARACVPTVGSMQGCFVSFLVANRTH------- 129 (437)
T ss_dssp HHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCC-----GGGEEEESHHHHHHHHHHHHHTTSC-------
T ss_pred HHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCC-----cccEEEeCCHHHHHHHHHHHHhcCC-------
Confidence 3444444443222 34544444578999999999998887533 1378999999999988877664 3
Q ss_pred ccCCCCe--EEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 167 RENISRL--VVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 167 ~~~~~~~--~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
+++ .|+++..+|.++..+++..|. +++.+|+++ +.+.+|+++|+++++.. .+.+|+++.++|++|
T Consensus 130 ----~gd~~~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~-~~~~~d~~~l~~~l~~~-----~~~~v~l~~p~nptG 196 (437)
T 3g0t_A 130 ----KNREYGTLFIDPGFNLNKLQCRILGQ---KFESFDLFE-YRGEKLREKLESYLQTG-----QFCSIIYSNPNNPTW 196 (437)
T ss_dssp ----TTCSCCEEEEESCCHHHHHHHHHHTC---CCEEEEGGG-GCTTHHHHHHHHHHTTT-----CCCEEEEESSCTTTC
T ss_pred ----CCCccEEEEeCCCcHhHHHHHHHcCC---EEEEEeecC-CCCccCHHHHHHHHhcC-----CceEEEEeCCCCCCC
Confidence 455 677888999999999999999 999999974 35689999999998321 134677888999999
Q ss_pred ccCC---chHHHHHHHHhCceEEeeccccchhccCc-cc---h---hhhcCCCCCCceeeccccccC-CCCcceEEEeeC
Q 038818 245 TVDP---LGPLCDIAKRYSIWVHVDAAYAGSACICP-EF---R---HFIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKN 313 (486)
Q Consensus 245 ~idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~-~~---~---~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~ 313 (486)
.+-| +++|+++|++||+++++|++|+.+..... .. . ..+.+....+.++.++||+++ .+..+|+++.++
T Consensus 197 ~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 276 (437)
T 3g0t_A 197 QCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISG 276 (437)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECH
T ss_pred CcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECH
Confidence 9976 77789999999999999999976433210 00 0 111222345678889999998 555688888764
Q ss_pred chHHHHHhc-CCcccccCccCCCCCccC-CCCccccCCCCCCchHHHHHHHHhchH--H---HHHHHHHHHHHHHHHHHH
Q 038818 314 PNALIKALS-TNPEFLRNKASDSKQVVD-YKDWQITLSRRFRALKLWLVLRSFGVA--N---LRNFLRSHVRMAQLFQEL 386 (486)
Q Consensus 314 ~~~~~~~~~-~~~~y~~~~~~~~~~~~~-~~~~~~~~sr~~~~l~~~~~l~~~g~~--g---~~~~~~~~~~~a~~l~~~ 386 (486)
+ ...+.+. ..+.+..... ... ........+-....+..+++...+... + ++++.++..++++++.+.
T Consensus 277 ~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 350 (437)
T 3g0t_A 277 K-LYEREYPDLEESFGRLRF-----GEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKM 350 (437)
T ss_dssp H-HHHCBCGGGHHHHSCSBH-----HHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHH
T ss_pred H-Hhhhhhhcccccccccch-----hHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 2220100 0000000000 000 000000000012233444444443222 2 788889999999999999
Q ss_pred HhCCCCeEEe------cC-CCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECC--EeEEEEE
Q 038818 387 VGGDNRFEIV------AP-RNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAG--IYFIRFA 457 (486)
Q Consensus 387 L~~~~~~~~~------~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~--~~~lR~~ 457 (486)
|+++ ++++. .+ .....+.+.+.+.. ..++.+.|.++|+.+........ ..++|++
T Consensus 351 L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis 414 (437)
T 3g0t_A 351 FLDN-GFNIVYDKDGNEPLADGFYFTVGYKGMD---------------SSKLIEKFVRYGMCAITLKTTGSKRNEAMRIC 414 (437)
T ss_dssp HHTT-TEEESSCEETTEECCSSSEEEEEETTCC---------------HHHHHHHHHHTTEECEESTTTTCCCTTCEEEE
T ss_pred HHHc-CCEEeccccCCCCCceeEEEEEecCCCC---------------HHHHHHHHHHcCeEEeeccccCCCCCCEEEEE
Confidence 9998 89887 34 44455666664211 24567777778875433222111 2679999
Q ss_pred ecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 458 VGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 458 ~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
++ ..++++|++++++|++++++
T Consensus 415 ~~--~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 415 TS--LLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp CS--SSCGGGHHHHHHHHHHHHHH
T ss_pred Ee--cCCHHHHHHHHHHHHHHHhc
Confidence 85 33777999999999988753
No 79
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.92 E-value=1.2e-23 Score=210.61 Aligned_cols=328 Identities=11% Similarity=0.093 Sum_probs=217.9
Q ss_pred HHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCc-ceEEcCCchHHHHHHHHHHHHHHHHHcc
Q 038818 88 GFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTG-GGVIQGTTCEAILCTLAAARDQILNEIG 166 (486)
Q Consensus 88 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~-~~~~t~ggt~a~~~al~~a~~~~~~~~~ 166 (486)
..+.+.+...+......|...+...++++.+.+|+.+.+|.+.+ .. ..++|+||++++..++.+...
T Consensus 46 ~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~-----~~~~v~~~~g~~~a~~~~~~~~~~------- 113 (386)
T 1u08_A 46 RYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPD-----ADSDITVTAGATEALYAAITALVR------- 113 (386)
T ss_dssp HHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCC-----TTTTEEEESSHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCC-----CCCCEEEcCChHHHHHHHHHHhCC-------
Confidence 34555555554332334555455789999999999999887532 12 589999999999887776532
Q ss_pred ccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 167 RENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 167 ~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
+++.|+++..+|.++..+++..|. +++.+|+++. ++.+|+++|++++++. +.+|+++.++|++|.+
T Consensus 114 ----~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~ 179 (386)
T 1u08_A 114 ----NGDEVICFDPSYDSYAPAIALSGG---IVKRMALQPP-HFRVDWQEFAALLSER------TRLVILNTPHNPSATV 179 (386)
T ss_dssp ----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECCTT-TCCCCHHHHHHHCCTT------EEEEEEESSCTTTCCC
T ss_pred ----CCCEEEEeCCCchhHHHHHHHcCC---EEEEeecCcc-cCcCCHHHHHHhhccc------CEEEEEeCCCCCCCcc
Confidence 566788888999999999999999 9999999753 4789999999988532 4577788999999998
Q ss_pred CC---chHHHHHHHHhCceEEeeccccchhccCccchhhhc--CCCCCCceeeccccccCCC-CcceEEEeeCchHHHHH
Q 038818 247 DP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFID--GIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKA 320 (486)
Q Consensus 247 dp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~--~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~ 320 (486)
-| +++|+++|++||+++++|++|+.+............ +....|.++.++||+++.| ..+|+++++++ ... .
T Consensus 180 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-~~~-~ 257 (386)
T 1u08_A 180 WQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAP-ISA-E 257 (386)
T ss_dssp CCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHH-HHH-H
T ss_pred CCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCHH-HHH-H
Confidence 75 689999999999999999999774332111111110 0125788999999999743 34888887643 322 2
Q ss_pred hcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCC
Q 038818 321 LSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRN 400 (486)
Q Consensus 321 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~ 400 (486)
+.....+.. + ..+ .....++..+++. +.++++++.++..++++++.+.|+++ ++++..+..
T Consensus 258 l~~~~~~~~--------------~--~~~-~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 318 (386)
T 1u08_A 258 IRKVHQYLT--------------F--SVN-TPAQLALADMLRA-EPEHYLALPDFYRQKRDILVNALNES-RLEILPCEG 318 (386)
T ss_dssp HHHHHHHHT--------------S--SCC-HHHHHHHHHHHHH-CTHHHHTHHHHHHHHHHHHHHHTTSS-SCEECCCCB
T ss_pred HHHHHHhhc--------------c--CCC-hHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCc
Confidence 211000000 0 000 0111222233332 35678888899999999999999987 888764443
Q ss_pred eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeE----CCEeEEEEEecCCCCcHHHHHHHHHHH
Q 038818 401 FAVVCFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMV----AGIYFIRFAVGATLTEDRHVIAAWKVV 475 (486)
Q Consensus 401 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~----~~~~~lR~~~~~~~tt~~did~~i~~l 475 (486)
...+.+.+.... .. ...++.+.+. +.|+.+..+..+ .+..++|+++. +++++|+++++.|
T Consensus 319 g~~~~~~~~~~~--------~~----~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~---~~~~~i~~~~~~l 383 (386)
T 1u08_A 319 TYFLLVDYSAVS--------TL----DDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFA---KKESTLLAAAERL 383 (386)
T ss_dssp SSEEEEECTTTC--------CS----CHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECC---SCHHHHHHHHHHH
T ss_pred eEEEEEecCCCC--------CC----CHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEc---CCHHHHHHHHHHH
Confidence 445666654310 00 0235666665 568754433322 24578999985 3788999999988
Q ss_pred HH
Q 038818 476 QE 477 (486)
Q Consensus 476 ~~ 477 (486)
++
T Consensus 384 ~~ 385 (386)
T 1u08_A 384 RQ 385 (386)
T ss_dssp TT
T ss_pred hh
Confidence 64
No 80
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.91 E-value=6.8e-23 Score=205.34 Aligned_cols=326 Identities=14% Similarity=0.072 Sum_probs=215.2
Q ss_pred HHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccc
Q 038818 88 GFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGR 167 (486)
Q Consensus 88 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 167 (486)
..+.+.+...+......|.......++++.+.+++.+.+|.+.. ....++|+|||+|+..++.+...
T Consensus 47 ~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~-----~~~v~~t~g~~~al~~~~~~l~~-------- 113 (391)
T 3h14_A 47 RGAVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLD-----PGRVVITPGSSGGFLLAFTALFD-------- 113 (391)
T ss_dssp HHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCC-----GGGEEEESSHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCC-----HHHEEEecChHHHHHHHHHHhcC--------
Confidence 34555666556544445555455688999999999999986532 13789999999999887776543
Q ss_pred cCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC
Q 038818 168 ENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD 247 (486)
Q Consensus 168 ~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id 247 (486)
+++.|+++..+|.++...++..|+ +++.+|+++++++.+|+++|+++ + +.+|+++.++|++|.+-
T Consensus 114 ---~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~---~------~~~v~i~~p~nptG~~~ 178 (391)
T 3h14_A 114 ---SGDRVGIGAPGYPSYRQILRALGL---VPVDLPTAPENRLQPVPADFAGL---D------LAGLMVASPANPTGTML 178 (391)
T ss_dssp ---TTCEEEEEESCCHHHHHHHHHTTC---EEEEEECCGGGTTSCCHHHHTTS---C------CSEEEEESSCTTTCCCC
T ss_pred ---CCCEEEEcCCCCccHHHHHHHcCC---EEEEeecCcccCCCCCHHHHHhc---C------CeEEEECCCCCCCCccC
Confidence 566788888999999999999999 99999998655578899999876 1 34788889999999998
Q ss_pred C---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcC
Q 038818 248 P---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALST 323 (486)
Q Consensus 248 p---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~ 323 (486)
| +++|+++|++||+++++|++|+.+..... ..... .....+.++.+++|+++ .+.++|+++.+++ ........
T Consensus 179 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~~~-~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~-~~~~~~~~ 255 (391)
T 3h14_A 179 DHAAMGALIEAAQAQGASFISDEIYHGIEYEAK-AVTAL-ELTDECYVINSFSKYFSMTGWRVGWMVVPED-QVRVVERI 255 (391)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSC-CCCGG-GTCSSSEEEEESSSTTCCTTSCCEEEECCGG-GHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEECcchhcccCCC-CcChh-hcCCCEEEEEechhccCCccceeEEEEeCHH-HHHHHHHH
Confidence 7 88999999999999999999976543211 11111 12244566778999997 5567888887654 22211110
Q ss_pred CcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCee
Q 038818 324 NPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF-GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFA 402 (486)
Q Consensus 324 ~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~ 402 (486)
...+. -....+..++++..+ +.+.+++..++..++++++.+.|+++ ++....++..+
T Consensus 256 ~~~~~---------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~ 313 (391)
T 3h14_A 256 AQNMF---------------------ICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPKA-GFTRIAPPDGA 313 (391)
T ss_dssp HHHTT---------------------CCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-TCCCBCCCCBT
T ss_pred Hhhhc---------------------cCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-CCCcccCCCee
Confidence 00000 011223333333332 56778888899999999999999887 44443344444
Q ss_pred EE-EEEeecCCCCCCCCCCccchHHHHHHHHHHHHhc-CcEEEeeeeEC---CEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 038818 403 VV-CFRVLPSASGLGDGKANEGANELNRKLLESINAS-GQLYVSHGMVA---GIYFIRFAVGATLTEDRHVIAAWKVVQE 477 (486)
Q Consensus 403 ~v-~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~---~~~~lR~~~~~~~tt~~did~~i~~l~~ 477 (486)
.+ .+.+.... . ...++.+.+.++ |+.+.++..+. +..++|+++.. ++++|+++++.|++
T Consensus 314 ~~~~~~~~~~~---------~----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~---~~~~i~~~l~~l~~ 377 (391)
T 3h14_A 314 FYVYADVSDLT---------D----DSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR---ATADIEEGLDRLEA 377 (391)
T ss_dssp TEEEEECTTTC---------S----CHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS---CHHHHHHHHHHHHH
T ss_pred EEEEEecCccC---------C----CHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC---CHHHHHHHHHHHHH
Confidence 33 33443211 0 123566666554 87544433322 36789999853 67899999999999
Q ss_pred HHHHH
Q 038818 478 KLDGI 482 (486)
Q Consensus 478 ~~~~l 482 (486)
++++.
T Consensus 378 ~~~~~ 382 (391)
T 3h14_A 378 FMQAR 382 (391)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 88754
No 81
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.91 E-value=1.4e-22 Score=209.61 Aligned_cols=331 Identities=9% Similarity=0.061 Sum_probs=222.4
Q ss_pred CccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCC
Q 038818 101 VGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQ 180 (486)
Q Consensus 101 ~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~ 180 (486)
....|..+++..++++.+.+++.+..|.+.. ....++|+||++++..++.+.... +++.|+++..
T Consensus 126 ~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-----~~~i~~t~G~~~al~~~~~~l~~~----------~gd~Vlv~~p 190 (500)
T 3tcm_A 126 ATGAYSHSQGIHGLRDAIASGIASRDGFPAN-----ADDIFLTDGASPGVHLMMQLLIRN----------EKDGILVPIP 190 (500)
T ss_dssp CSSSCCCTTCCHHHHHHHHHHHHHHHSSCCC-----GGGEEEESSSHHHHHHHHHHHCCS----------TTEEEEEEES
T ss_pred cCCCcCCCcChHHHHHHHHHHHHhhcCCCCC-----cccEEEcCCHHHHHHHHHHHHcCC----------CCCEEEEeCC
Confidence 3456777777889999999999999886533 137899999999998777765411 6778999999
Q ss_pred CchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHH
Q 038818 181 THSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAK 257 (486)
Q Consensus 181 ~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~ 257 (486)
+|.++..+++..|. +++.+|++++++|.+|+++|+++|++...+|..+.+|+++.++|+||.+-+ +++|+++|+
T Consensus 191 ~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~ 267 (500)
T 3tcm_A 191 QYPLYSASIALHGG---ALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCK 267 (500)
T ss_dssp CCTHHHHHHHHTTC---EEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred CcHhHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHH
Confidence 99999999999999 999999987667899999999999987766667778888899999999854 677788899
Q ss_pred HhCceEEeeccccchhccCc----cchhhhcCC----CCCCce-eeccccccC--CCCcceEEEee--CchHHHHHhcCC
Q 038818 258 RYSIWVHVDAAYAGSACICP----EFRHFIDGI----EGADSF-SLNAHKWFF--TTLDCCCLWVK--NPNALIKALSTN 324 (486)
Q Consensus 258 ~~g~~lhvD~a~g~~~~~~~----~~~~~~~~~----~~aDsi-~~~~hK~l~--~p~~~g~~~~~--~~~~~~~~~~~~ 324 (486)
+||+++++|++|+.+..... .+......+ .....+ ..+++|.++ ....+|++++. ++..........
T Consensus 268 ~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~ 347 (500)
T 3tcm_A 268 NEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIA 347 (500)
T ss_dssp HHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHHH
T ss_pred HcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHHH
Confidence 99999999999977543211 111111111 122334 448899984 23457887763 443332221110
Q ss_pred cccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhc------------hHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 038818 325 PEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFG------------VANLRNFLRSHVRMAQLFQELVGGDNR 392 (486)
Q Consensus 325 ~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g------------~~g~~~~~~~~~~~a~~l~~~L~~~~~ 392 (486)
..+. + ...+..+++...+. .+...++.++..++++++.+.|+++|+
T Consensus 348 ~~~~-------------------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g 405 (500)
T 3tcm_A 348 SVNL-------------------C---SNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEG 405 (500)
T ss_dssp HTTC-------------------C---CCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred hccc-------------------C---CCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 0000 0 11222222222221 134566677788899999999999999
Q ss_pred eEEecCCCeeEEEE-EeecCCCCCCCCCCccchHH-------HHHH-HHHHHHhcCcEEEeeeeE---CCEeEEEEEecC
Q 038818 393 FEIVAPRNFAVVCF-RVLPSASGLGDGKANEGANE-------LNRK-LLESINASGQLYVSHGMV---AGIYFIRFAVGA 460 (486)
Q Consensus 393 ~~~~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~-------~~~~-l~~~l~~~g~~~~~~~~~---~~~~~lR~~~~~ 460 (486)
+++. ++..+++.| ++..+ ....+. .... +.+.+.+.|+.+.++..+ .+..++|++++
T Consensus 406 ~~~~-~~~g~~~~~~~~~lp---------~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~- 474 (500)
T 3tcm_A 406 ITCN-EAEGAMYVFPQICLP---------QKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL- 474 (500)
T ss_dssp EECC-CCCBTTEECCEECCC---------HHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC-
T ss_pred cEEe-cCCeEEEEeeeecCc---------hhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC-
Confidence 9876 555666655 23221 000000 0112 234455678765544332 34668999985
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 461 TLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 461 ~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
+++++|+++++.|.++.+++.+
T Consensus 475 --~~~e~i~~~i~~l~~~~~~~~~ 496 (500)
T 3tcm_A 475 --PQEDKIPAVISRFTVFHEAFMS 496 (500)
T ss_dssp --SCTTTHHHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHHHHHHHH
Confidence 5677999999999999887764
No 82
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.91 E-value=7.1e-24 Score=214.03 Aligned_cols=333 Identities=12% Similarity=0.068 Sum_probs=220.6
Q ss_pred HHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCc-ceEEcCCchHHHHHHHHHHHHHHHHHccc
Q 038818 89 FLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTG-GGVIQGTTCEAILCTLAAARDQILNEIGR 167 (486)
Q Consensus 89 ~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~-~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 167 (486)
.+.+.+...+......|...+...++++.+.+++.+.+|.+... . .+++|+|||+|+..++.+...
T Consensus 42 ~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-----~~~v~~t~g~~~al~~~~~~~~~-------- 108 (411)
T 2o0r_A 42 KMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDP-----ETEVLVTVGATEAIAAAVLGLVE-------- 108 (411)
T ss_dssp HHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCT-----TTSEEEEEHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCC-----CceEEEeCCHHHHHHHHHHHhcC--------
Confidence 34455555443323345555556899999999999999865321 2 589999999999888776632
Q ss_pred cCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCC-CCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 168 ENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKS-SSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 168 ~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~-~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
+++.|+++..+|.++..+++..|. +++.+|++++ .++.+|+++|++++++. +.+|+++.++|++|.+
T Consensus 109 ---~gd~Vl~~~~~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~~~nptG~~ 176 (411)
T 2o0r_A 109 ---PGSEVLLIEPFYDSYSPVVAMAGA---HRVTVPLVPDGRGFALDADALRRAVTPR------TRALIINSPHNPTGAV 176 (411)
T ss_dssp ---TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEEETTEEECCHHHHHHHCCTT------EEEEEEESSCTTTCCC
T ss_pred ---CCCEEEEeCCCcHhHHHHHHHcCC---EEEEeeccccccCCCCCHHHHHHhhccC------ceEEEEeCCCCCCCCC
Confidence 567788898999999999999999 9999998752 23679999999988642 4577788999999998
Q ss_pred CC---chHHHHHHHHhCceEEeeccccchhccCccchhh--hcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHH
Q 038818 247 DP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHF--IDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKA 320 (486)
Q Consensus 247 dp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~ 320 (486)
-| +++|+++|++||+++++|++|+++.......... +.+....|.++.++||+++.| ..+|+++++ ++... .
T Consensus 177 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~-~ 254 (411)
T 2o0r_A 177 LSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGP-AELIA-G 254 (411)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECC-HHHHH-H
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeC-HHHHH-H
Confidence 66 5999999999999999999998754321111111 111236789999999998733 348888875 33322 2
Q ss_pred hcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCC
Q 038818 321 LSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRN 400 (486)
Q Consensus 321 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~ 400 (486)
+.....+.. .. .......++..++.. +.++++++.++..++++++.+.|++. ++++..+..
T Consensus 255 l~~~~~~~~----------------~~-~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 315 (411)
T 2o0r_A 255 VRAAKQYLS----------------YV-GGAPFQPAVALALDT-EDAWVAALRNSLRARRDRLAAGLTEI-GFAVHDSYG 315 (411)
T ss_dssp HHHHHHHHT----------------SC-CCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHH-TCEECCCCB
T ss_pred HHHHHhhcc----------------CC-CChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHc-CCEecCCCe
Confidence 211000100 00 001112233333432 36678888899999999999999887 788764433
Q ss_pred eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeE-C------------CEeEEEEEecCCCCcHH
Q 038818 401 FAVVCFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMV-A------------GIYFIRFAVGATLTEDR 466 (486)
Q Consensus 401 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~-~------------~~~~lR~~~~~~~tt~~ 466 (486)
...+.+.+.... .. + ..++.+.+. +.|+.+..+..+ . +..++|+++. ++++
T Consensus 316 g~~~~~~~~~~~--------~~--~--~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~---~~~e 380 (411)
T 2o0r_A 316 TYFLCADPRPLG--------YD--D--STEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFC---KRDD 380 (411)
T ss_dssp SSEEEEECGGGT--------CC--C--HHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECC---SCHH
T ss_pred eEEEEEecCCCC--------CC--C--HHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEec---CCHH
Confidence 335666664310 00 1 235566665 568754443222 1 3468999984 2678
Q ss_pred HHHHHHHHHHHHHHHH
Q 038818 467 HVIAAWKVVQEKLDGI 482 (486)
Q Consensus 467 did~~i~~l~~~~~~l 482 (486)
+|+++++.|++++++.
T Consensus 381 ~i~~~~~~l~~~~~~~ 396 (411)
T 2o0r_A 381 TLDEAIRRLSVLAERP 396 (411)
T ss_dssp HHHHHHHHHGGGGC--
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999998876543
No 83
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.91 E-value=2.4e-23 Score=210.63 Aligned_cols=322 Identities=13% Similarity=0.040 Sum_probs=205.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.++..++.+++++++|.+ ..+++++||+|+..++.+.+.. +++.|+++..+|.++..+++.
T Consensus 41 ~~l~~~l~~~la~~~g~~---------~~i~~~~gt~al~~~~~~~~~~----------~gd~Vl~~~~~~~~~~~~~~~ 101 (418)
T 2c81_A 41 ESMERKFAKAFADFNGVP---------YCVPTTSGSTALMLALEALGIG----------EGDEVIVPSLTWIATATAVLN 101 (418)
T ss_dssp CCHHHHHHHHHHHHHTCS---------EEEEESCHHHHHHHHHHHTTCC----------TTCEEEEESSSCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCC---------cEEEeCCHHHHHHHHHHHcCCC----------CcCEEEECCCccHhHHHHHHH
Confidence 445566778889999876 2577888899998887765211 567788999999999999999
Q ss_pred cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccc
Q 038818 192 AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAG 271 (486)
Q Consensus 192 ~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~ 271 (486)
.|+ +++.+|+++ +++.+|+++|++++++. +.+|+++ +++|.+.|+++|.++|++||+++|+|++|+.
T Consensus 102 ~g~---~~~~~~~~~-~~~~~d~~~l~~~i~~~------~~~v~~~---~~~G~~~~~~~i~~~~~~~~~~li~D~a~~~ 168 (418)
T 2c81_A 102 VNA---LPVFVDVEA-DTYCIDPQLIKSAITDK------TKAIIPV---HLFGSMANMDEINEIAQEHNLFVIEDCAQSH 168 (418)
T ss_dssp TTC---EEEEECBCT-TTCSBCHHHHGGGCCTT------EEEECCB---CCTTCCCCHHHHHHHHHHTTCEEEEECTTCT
T ss_pred cCC---EEEEEecCC-CCCCcCHHHHHHhhCCC------CeEEEEe---CCcCCcccHHHHHHHHHHCCCEEEEECcccc
Confidence 999 999999975 35799999999988643 3355543 4789999999999999999999999999987
Q ss_pred hhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccC-CCCCccCCCC-----cc
Q 038818 272 SACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKAS-DSKQVVDYKD-----WQ 345 (486)
Q Consensus 272 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~-~~~~~~~~~~-----~~ 345 (486)
+..+.. +. +..+..+++.++++||+++.+ .+|+++.+++........... +...... .......+.+ ..
T Consensus 169 ~~~~~~--~~-~~~~~~~~~~s~s~~K~~~~g-~~g~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (418)
T 2c81_A 169 GSVWNN--QR-AGTIGDIGAFSCQQGKVLTAG-EGGIIVTKNPRLFELIQQLRA-DSRVYCDDSSELMHGDMQLVKKGDI 243 (418)
T ss_dssp TCEETT--EE-TTSSSSEEEEECCTTSSSCSS-SCEEEEESCHHHHHHHHHHHB-TTEEECSCGGGCCTTCBSEEECCSS
T ss_pred cCccCC--Ee-cccccceEEEeccCCcccCCC-CeEEEEECCHHHHHHHHHHHH-hCccccccccccccchhhccccccc
Confidence 653211 11 111223566677779999874 667777655554322111000 0000000 0000000100 00
Q ss_pred ccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCe------eEEEEEeecCCCCCCCCC
Q 038818 346 ITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNF------AVVCFRVLPSASGLGDGK 419 (486)
Q Consensus 346 ~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~------~~v~f~~~~~~~~~~~~~ 419 (486)
+....+...+.....+ ...+++++..++..++++++.+.|+++|++++..++.. .++++.+.....
T Consensus 244 ~g~~~~~~~~~aa~~~--~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 315 (418)
T 2c81_A 244 QGSNYCLSEFQSAILL--DQLQELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFDPVKF------ 315 (418)
T ss_dssp CCCBCCCCHHHHHHHH--HHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEECGGGT------
T ss_pred cCcCCCcCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEccccc------
Confidence 1111122223222222 23456778888889999999999999989998744432 245566642000
Q ss_pred CccchHHHHHHHHHHHHhc-CcE---EEeee-eE------C--------------------C---------EeEEEEEec
Q 038818 420 ANEGANELNRKLLESINAS-GQL---YVSHG-MV------A--------------------G---------IYFIRFAVG 459 (486)
Q Consensus 420 ~~~~~~~~~~~l~~~l~~~-g~~---~~~~~-~~------~--------------------~---------~~~lR~~~~ 459 (486)
. +....++.+.|.++ |+. .-.+. .. . + ...+|+++
T Consensus 316 --~--~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~- 390 (418)
T 2c81_A 316 --G--GLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHH- 390 (418)
T ss_dssp --T--TCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEG-
T ss_pred --c--ccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecC-
Confidence 0 00124567777777 875 32211 00 0 1 25899998
Q ss_pred CCCC-cHHHHHHHHHHHHHHHHHHh
Q 038818 460 ATLT-EDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 460 ~~~t-t~~did~~i~~l~~~~~~l~ 483 (486)
++.+ |++||++++++|+++++++.
T Consensus 391 ~~~~gt~edi~~~~~~l~~~~~~~~ 415 (418)
T 2c81_A 391 AILLAEPSHLSLLVDAVAELARKFC 415 (418)
T ss_dssp GGGGSCHHHHHHHHHHHHHHHHTTC
T ss_pred CccCCCHHHHHHHHHHHHHHHHhhc
Confidence 5688 89999999999999887653
No 84
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.91 E-value=6.6e-24 Score=211.46 Aligned_cols=311 Identities=11% Similarity=0.080 Sum_probs=207.2
Q ss_pred ccccccChhhHHHHHHHHHHHHHHc-CCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCC
Q 038818 102 GFNWMSSPAATELENIVMDWLGEML-KLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQ 180 (486)
Q Consensus 102 ~~~~~~~~~~~~le~~~~~~l~~l~-g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~ 180 (486)
...|...+...++++.+ ++++ +.+.+ .+++|+|||+|+..++.+... +++.|+++..
T Consensus 56 ~~~y~~~~g~~~l~~~l----a~~~~~~~~~-------~v~~~~g~~~a~~~~~~~l~~-----------~gd~Vl~~~~ 113 (375)
T 3op7_A 56 KLNYGWIEGSPAFKKSV----SQLYTGVKPE-------QILQTNGATGANLLVLYSLIE-----------PGDHVISLYP 113 (375)
T ss_dssp CCSSCCTTCCHHHHHHH----HTTSSSCCGG-------GEEEESHHHHHHHHHHHHHCC-----------TTCEEEEEES
T ss_pred CcCCCCCCChHHHHHHH----HHHhccCChh-------hEEEcCChHHHHHHHHHHhcC-----------CCCEEEEeCC
Confidence 34454455556666654 4444 34443 689999999999888876643 5677888999
Q ss_pred CchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHH
Q 038818 181 THSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAK 257 (486)
Q Consensus 181 ~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~ 257 (486)
+|.++..+++..|. +++.+|+++.+.+.+|+++|++++++. +.+|+++.++|++|.+.| +++|+++|+
T Consensus 114 ~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~l~~i~~la~ 184 (375)
T 3op7_A 114 TYQQLYDIPKSLGA---EVDLWQIEEENGWLPDLEKLRQLIRPT------TKMICINNANNPTGAVMDRTYLEELVEIAS 184 (375)
T ss_dssp SCTHHHHHHHHTTC---EEEEEEEEGGGTTEECHHHHHHHCCTT------CCEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred CchhHHHHHHHcCC---EEEEEeccccCCCCCCHHHHHHhhccC------CeEEEEcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 99999999999999 999999875445789999999998743 346788899999999999 999999999
Q ss_pred HhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCC
Q 038818 258 RYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSK 336 (486)
Q Consensus 258 ~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 336 (486)
+||+++++|++|+.+... ...... .....+.+..+++|+++ ....+|+++. +++... .+.....+.
T Consensus 185 ~~~~~li~De~~~~~~~~--~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~v~~-~~~l~~-~~~~~~~~~-------- 251 (375)
T 3op7_A 185 EVGAYILSDEVYRSFSEL--DVPSII-EVYDKGIAVNSLSKTYSLPGIRIGWVAA-NHQVTD-ILRDYRDYT-------- 251 (375)
T ss_dssp TTTCEEEEECCSCCCSSS--CCCCHH-HHCTTEEEEEESSSSSSCGGGCCEEEEC-CHHHHH-HHTTTGGGT--------
T ss_pred HcCCEEEEEccccccccc--CCCchh-hhcCCEEEEeEChhhcCCcccceEEEEe-CHHHHH-HHHHHHhhh--------
Confidence 999999999999775432 111111 11234467788999998 3455788877 444433 232111110
Q ss_pred CccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCC
Q 038818 337 QVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASG 414 (486)
Q Consensus 337 ~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~ 414 (486)
+.....+..+++...+ ..+.+++..++..++++++.+.|++.+++++..+.....+.+.+....
T Consensus 252 ------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-- 317 (375)
T 3op7_A 252 ------------MICAGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDM-- 317 (375)
T ss_dssp ------------TSCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCSS--
T ss_pred ------------ccCCCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCCC--
Confidence 0011223333333322 234556667777889999999999888898765443333444443211
Q ss_pred CCCCCCccchHHHHHHHHHHH-HhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhhc
Q 038818 415 LGDGKANEGANELNRKLLESI-NASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILAT 485 (486)
Q Consensus 415 ~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~~ 485 (486)
+ ..++.+.+ .+.|+.+.++..+....++|++++. ++++|+++++.|.++++++.++
T Consensus 318 ----------~--~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~---~~~~i~~~l~~l~~~l~~~~~~ 374 (375)
T 3op7_A 318 ----------P--MEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFAC---EQETLIKGLEKLSQFLRRFDKE 374 (375)
T ss_dssp ----------C--HHHHHHHHHHHHCEECEEGGGGTCTTEEEECCCS---CHHHHHHHHHHHHHHHGGGC--
T ss_pred ----------C--HHHHHHHHHHhCCEEEeChhhhCCCCeEEEEecC---CHHHHHHHHHHHHHHHHHHhhc
Confidence 0 23455555 4668765444444446789999853 3479999999999998876543
No 85
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.91 E-value=1.7e-22 Score=200.35 Aligned_cols=287 Identities=12% Similarity=0.088 Sum_probs=203.6
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCC
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGID 195 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g 195 (486)
.++++++++++|.+.+ ..++|+|||+++..++.+... ++..|+++..+|.++...++..|.
T Consensus 70 ~~lr~~la~~~~~~~~-------~v~~~~g~t~a~~~~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~~~g~- 130 (363)
T 3ffh_A 70 SSLRKEVADFYQLEEE-------ELIFTAGVDELIELLTRVLLD-----------TTTNTVMATPTFVQYRQNALIEGA- 130 (363)
T ss_dssp HHHHHHHHHHHTCCGG-------GEEEESSHHHHHHHHHHHHCS-----------TTCEEEEEESSCHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHhCCChh-------hEEEeCCHHHHHHHHHHHHcc-----------CCCEEEEcCCChHHHHHHHHHcCC-
Confidence 4566778888887665 789999999999887776532 566788888999999999999999
Q ss_pred CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh--CceEEeeccccchh
Q 038818 196 PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY--SIWVHVDAAYAGSA 273 (486)
Q Consensus 196 ~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~--g~~lhvD~a~g~~~ 273 (486)
+++.+|.++ ++.+|+++|++++++. +.+|+++.++|++|.+.|+++|.++|+.+ |+++|+|++|+.+.
T Consensus 131 --~~~~v~~~~--~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~ 200 (363)
T 3ffh_A 131 --EVREIPLLQ--DGEHDLEGMLNAIDEK------TTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYV 200 (363)
T ss_dssp --EEEEEECCT--TSCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGC
T ss_pred --EEEEecCCC--CCCcCHHHHHHhcccC------CCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhc
Confidence 999999986 5799999999998643 45788899999999999999999999888 99999999998654
Q ss_pred ccCccchhhhc--CCCCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCC
Q 038818 274 CICPEFRHFID--GIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSR 350 (486)
Q Consensus 274 ~~~~~~~~~~~--~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr 350 (486)
. ........ ....-+.+..+++|+++ ....+|+++++ ++...........|
T Consensus 201 ~--~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~l~~~~~~~----------------------- 254 (363)
T 3ffh_A 201 T--PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIAD-KEIIRQLNIVRPPF----------------------- 254 (363)
T ss_dssp S--SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEEC-HHHHHHHHHTCCSC-----------------------
T ss_pred C--ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecC-HHHHHHHHHhCCCC-----------------------
Confidence 3 11111111 11123356778899997 44456888874 43333221111000
Q ss_pred CCCchHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHH
Q 038818 351 RFRALKLWLVLRSF-GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNR 429 (486)
Q Consensus 351 ~~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 429 (486)
....+..+++...+ ..+++++..++..++++++.+.|++++++++. ++..+.+.+.+... ..
T Consensus 255 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~~~----------------~~ 317 (363)
T 3ffh_A 255 NTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVKLY-PANGNFVLIDLGIE----------------AG 317 (363)
T ss_dssp CCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEC-CCCSSEEEEECSSC----------------HH
T ss_pred CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhCCCceEC-CCCCeEEEEECCCC----------------HH
Confidence 12333334444333 23667888889999999999999987789876 45556666665421 24
Q ss_pred HHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 430 KLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 430 ~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
++.+.|.++|+.+..+..+...+++|+++. +++|+++++++|+++
T Consensus 318 ~~~~~l~~~gi~v~~g~~~~~~~~iRis~~----~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 318 TIFSYLEKNGYITRSGAALGFPTAVRITIG----KEEDNSAVIALLEKL 362 (363)
T ss_dssp HHHHHHHHTTEECEETTTTTCTTEEEEECC----CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCeEEEeCccCCCCCeEEEECC----CHHHHHHHHHHHHHh
Confidence 567777777875443332323568999974 778999999999875
No 86
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.91 E-value=2.7e-24 Score=214.25 Aligned_cols=322 Identities=12% Similarity=0.054 Sum_probs=206.4
Q ss_pred HHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccc
Q 038818 88 GFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGR 167 (486)
Q Consensus 88 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 167 (486)
..+.+.+...+... .|..++...++| +.+++++|.+ .+++++|||+|+..++.++.-.
T Consensus 17 ~~~~~a~~~~~~~~--~~~~~~~~~~l~----~~la~~~~~~---------~~i~~~sgt~al~~~l~~l~~~------- 74 (373)
T 3frk_A 17 YEIKFKFEEIYKRN--WFILGDEDKKFE----QEFADYCNVN---------YCIGCGNGLDALHLILKGYDIG------- 74 (373)
T ss_dssp HHHHHHHHHHHHHT--CCSSSHHHHHHH----HHHHHHHTSS---------EEEEESCHHHHHHHHHHHTTCC-------
T ss_pred HHHHHHHHHHHHCC--CccCCchHHHHH----HHHHHHhCCC---------eEEEeCCHHHHHHHHHHHcCCC-------
Confidence 33444444444322 244445544554 5567777764 4799999999998887765211
Q ss_pred cCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC
Q 038818 168 ENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD 247 (486)
Q Consensus 168 ~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id 247 (486)
+++.|+++..+|.++..+++..|+ +++.+|++++ ++.+|+++|++++++. +.+|+ +++++|.+.
T Consensus 75 ---~gd~Vi~~~~~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~l~~~------~~~v~---~~n~~G~~~ 138 (373)
T 3frk_A 75 ---FGDEVIVPSNTFIATALAVSYTGA---KPIFVEPDIR-TYNIDPSLIESAITEK------TKAII---AVHLYGQPA 138 (373)
T ss_dssp ---TTCEEEEETTSCTHHHHHHHHHSC---EEEEECEETT-TTEECGGGTGGGCCTT------EEEEE---EECCTTCCC
T ss_pred ---CcCEEEECCCCcHHHHHHHHHcCC---EEEEEecccc-ccCcCHHHHHHhcCCC------CeEEE---EECCCcCcc
Confidence 567899999999999999999999 9999999853 5799999999988653 33455 567899999
Q ss_pred CchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeec--cccccCCCCcceEEEeeCchHHHHHhcCCc
Q 038818 248 PLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLN--AHKWFFTTLDCCCLWVKNPNALIKALSTNP 325 (486)
Q Consensus 248 pl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~--~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~ 325 (486)
|+++|.++|++||+++|+|+||+.+...... .. + ...|.++++ +||+++++..+|+++.+++...........
T Consensus 139 ~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~--~~--~-~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~~~~~~~ 213 (373)
T 3frk_A 139 DMDEIKRIAKKYNLKLIEDAAQAHGSLYKGM--KV--G-SLGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEKIKALSN 213 (373)
T ss_dssp CHHHHHHHHHHHTCEEEEECTTCTTCEETTE--ET--T-SSSSEEEEECCTTSSSCCSSSCEEEEESCHHHHHHHHHHHB
T ss_pred cHHHHHHHHHHcCCEEEEECCcccCCEECCE--ec--c-ccccEEEEeCcCCCccCccceeEEEEeCCHHHHHHHHHHHh
Confidence 9999999999999999999999765442211 11 1 136777777 779997744567777766544322111000
Q ss_pred ccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCC---ee
Q 038818 326 EFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRN---FA 402 (486)
Q Consensus 326 ~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~---~~ 402 (486)
+-... .+. ....+..+....+..++.....+++++..++..++++++.+.|++++ +++...+. .+
T Consensus 214 -~g~~~--------~~~--~~~~g~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~ 281 (373)
T 3frk_A 214 -YGSEK--------KYH--HIYKGFNSRLDELQAGFLRVKLKYLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYAKHV 281 (373)
T ss_dssp -TTCSB--------TTB--CCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEECC
T ss_pred -cCccc--------CCc--cccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCCcee
Confidence 00000 000 00111122333444444444456788889999999999999999986 76643322 12
Q ss_pred EEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeee--eEC---------------------CEeEEEEEec
Q 038818 403 VVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHG--MVA---------------------GIYFIRFAVG 459 (486)
Q Consensus 403 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~~---------------------~~~~lR~~~~ 459 (486)
.+.|.+.... ...+.+.|.++|+..-... ... ....+|+++
T Consensus 282 ~~~~~~~~~~---------------~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~- 345 (373)
T 3frk_A 282 WYTFVIRSEK---------------RDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPI- 345 (373)
T ss_dssp CSSEEEEESS---------------HHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECC-
T ss_pred eEEEEEEeCC---------------HHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccC-
Confidence 2233332211 3456777777787422111 000 126899998
Q ss_pred CCCCcHHHHHHHHHHHHHHHH
Q 038818 460 ATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 460 ~~~tt~~did~~i~~l~~~~~ 480 (486)
++.+|++|||+++++|++...
T Consensus 346 ~~~~t~~di~~~~~~l~~~~~ 366 (373)
T 3frk_A 346 WYGMKNEEIEYVIDKINAWKL 366 (373)
T ss_dssp CTTCCHHHHHHHHHHHHTCC-
T ss_pred CCCCCHHHHHHHHHHHHHHhh
Confidence 678899999999999987654
No 87
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.91 E-value=1.8e-22 Score=203.54 Aligned_cols=291 Identities=13% Similarity=0.086 Sum_probs=200.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHc
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIA 192 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 192 (486)
....++.+++++++|.+. .+++++||++|..++.+... +++.|+++...|.+...+++..
T Consensus 104 ~~~~~l~~~la~~~g~~~---------~i~~~sGt~a~~~~l~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~ 163 (409)
T 3kki_A 104 YDKPMIEKRLAKFTGFDE---------CLLSQSGWNANVGLLQTICQ-----------PNTNVYIDFFAHMSLWEGARYA 163 (409)
T ss_dssp TTSCHHHHHHHHHHTCSE---------EEEESCHHHHHHHHHHHHCC-----------TTCEEEEETTSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCe---------EEEecchHHHHHHHHHHhcC-----------CCCEEEECCCcCHHHHHHHHHc
Confidence 334456677888888753 46667778999888776543 6778889999999999999999
Q ss_pred CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccch
Q 038818 193 GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGS 272 (486)
Q Consensus 193 G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~ 272 (486)
|. +++.++. +|+++|++++++.. +.+|+++.+++++|.+.|+++|+++|++||+++++|++|+++
T Consensus 164 g~---~~~~~~~-------~d~~~le~~l~~~~-----~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g 228 (409)
T 3kki_A 164 NA---QAHPFMH-------NNCDHLRMLIQRHG-----PGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLG 228 (409)
T ss_dssp TC---EEEEECT-------TCHHHHHHHHHHHC-----SCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred CC---eEEEecC-------CCHHHHHHHHHhcC-----CeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCcccc
Confidence 98 7777653 58999999998742 247888999999999999999999999999999999999765
Q ss_pred hccCccchh--hhcCC-CCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCC
Q 038818 273 ACICPEFRH--FIDGI-EGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLS 349 (486)
Q Consensus 273 ~~~~~~~~~--~~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~s 349 (486)
.+.. .... ...++ ..+|.++.+++|+++.+ .|+++.+++ ..........++... .+
T Consensus 229 ~~g~-~g~~~~~~~~~~~~~di~~~s~sK~~~~~--gg~v~~~~~-~~~~~~~~~~~~~~~-----------------~~ 287 (409)
T 3kki_A 229 THGP-NGAGLLAELGLTREVHFMTASLAKTFAYR--AGAIWCNNE-VNRCVPFISYPAIFS-----------------ST 287 (409)
T ss_dssp TSSG-GGCCHHHHHTCGGGCSEEEEESSSTTCSS--CEEEEESSS-GGGTHHHHCHHHHHS-----------------BC
T ss_pred ccCC-CCCcchhhcCCCCCCCEEEeecchhhCCC--ceEEEECHH-HHHHHHHhCcCcccc-----------------CC
Confidence 4311 1111 11122 36789999999999876 466666544 211111111112111 01
Q ss_pred CCCCch---HHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHH
Q 038818 350 RRFRAL---KLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANE 426 (486)
Q Consensus 350 r~~~~l---~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~ 426 (486)
...+ ++..++..+ +..+++.++..++++++.+.|+++ ++++. +..+++.+.+.. ..
T Consensus 288 --~~~~~~aa~~aal~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~--------------~~ 346 (409)
T 3kki_A 288 --LLPYEAAGLETTLEII--ESADNRRQHLDRMARKLRIGLSQL-GLTIR--SESQIIGLETGD--------------ER 346 (409)
T ss_dssp --CCHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHTT-TCCCC--CSSSEEEEEEES--------------HH
T ss_pred --CcHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCccC--CCCCEEEEEeCC--------------HH
Confidence 1222 223333332 122567778889999999999987 67665 355677777653 22
Q ss_pred HHHHHHHHHHhcCcEEEeee---eECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 427 LNRKLLESINASGQLYVSHG---MVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 427 ~~~~l~~~l~~~g~~~~~~~---~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
...++.+.|.++|+++.... ...+..++|+++. ..+++++|+++++.|+++++.
T Consensus 347 ~~~~~~~~L~~~Gv~v~~~~~~~~~~~~~~iRi~~~-~~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 347 NTEKVRDYLESNGVFGSVFCRPATSKNKNIIRLSLN-SDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp HHHHHHHHHHHTTEECEEECTTSSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCceEeeeCCCCcCCCCcEEEEEcc-CCCCHHHHHHHHHHHHHHHhc
Confidence 34567778888887532211 1235689999984 577888999999999998865
No 88
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.91 E-value=1.8e-22 Score=199.38 Aligned_cols=292 Identities=13% Similarity=0.069 Sum_probs=206.1
Q ss_pred HHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCC
Q 038818 115 ENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGI 194 (486)
Q Consensus 115 e~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~ 194 (486)
..++++++++++|.+.+ ..++|+|||+|+..++.+... +++.|+++..+|.++...++..|.
T Consensus 53 ~~~l~~~la~~~~~~~~-------~i~~~~g~~~a~~~~~~~l~~-----------~gd~vl~~~~~~~~~~~~~~~~g~ 114 (354)
T 3ly1_A 53 ILMLGNKLAAHHQVEAP-------SILLTAGSSEGIRAAIEAYAS-----------LEAQLVIPELTYGDGEHFAKIAGM 114 (354)
T ss_dssp HHHHHHHHHHHTTSCGG-------GEEEESHHHHHHHHHHHHHCC-----------TTCEEEEESSSCTHHHHHHHHTTC
T ss_pred hHHHHHHHHHHhCCChH-------HEEEeCChHHHHHHHHHHHhC-----------CCCeEEECCCCchHHHHHHHHcCC
Confidence 34677889999998665 789999999999887776532 566788899999999999999999
Q ss_pred CCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHH--hCceEEeeccccch
Q 038818 195 DPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKR--YSIWVHVDAAYAGS 272 (486)
Q Consensus 195 g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~--~g~~lhvD~a~g~~ 272 (486)
+++.+|.++ ++.+|+++|++++++. ..+.+|+++.++|++|.+-|++++.++++. +|+++++|++|+.+
T Consensus 115 ---~~~~~~~~~--~~~~d~~~l~~~l~~~----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~ 185 (354)
T 3ly1_A 115 ---KVTKVKMLD--NWAFDIEGLKAAVAAY----SGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEF 185 (354)
T ss_dssp ---EEEEECCCT--TSCCCHHHHHHHHHTC----SSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGG
T ss_pred ---EEEEecCCC--CCCCCHHHHHHHhccC----CCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHh
Confidence 999999985 5799999999999731 124578888999999999999988888887 99999999999865
Q ss_pred hccCc--cchhhhcCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCC
Q 038818 273 ACICP--EFRHFIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLS 349 (486)
Q Consensus 273 ~~~~~--~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~s 349 (486)
..... ............+.++.++||+++ .+..+|+++.+ +............ .
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~~~~~~~~---------------------~- 242 (354)
T 3ly1_A 186 VNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAH-PTVIALMGRYVAG---------------------E- 242 (354)
T ss_dssp CCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECC-HHHHHHHGGGTTC---------------------S-
T ss_pred ccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecC-HHHHHHHHHhcCC---------------------C-
Confidence 43211 111111111134577889999997 55567888774 3333222111100 0
Q ss_pred CCCCchHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHH
Q 038818 350 RRFRALKLWLVLRSFG-VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELN 428 (486)
Q Consensus 350 r~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~ 428 (486)
....+..+++...+. .+.++++.++..++++++.+.|+++ ++++. ++..+.+.+.+... .
T Consensus 243 -~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~-~~~~~~~~~~~~~~----------------~ 303 (354)
T 3ly1_A 243 -KINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALEDL-KLPYL-PSEGNFVFHQLVVP----------------L 303 (354)
T ss_dssp -CCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCCSSEEEEECSSC----------------H
T ss_pred -CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-CCCceEEEEECCCC----------------H
Confidence 113334444444432 2567888888999999999999887 67765 44555666665421 2
Q ss_pred HHHHHHHHhcCcEEEeeeeE-CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 429 RKLLESINASGQLYVSHGMV-AGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 429 ~~l~~~l~~~g~~~~~~~~~-~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
.++.+.|.++|+. +. ..+ ....++|+++. +++|++++++.|++++++
T Consensus 304 ~~~~~~l~~~gi~-v~-g~~~~~~~~iRis~~----~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 304 KDYQTHMADAGVL-IG-RAFPPADNWCRISLG----TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp HHHHHHHHHTTEE-CC-CCCTTCTTEEEEECC----CHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCEE-Ee-ecCCCCCCEEEEEcC----CHHHHHHHHHHHHHHHHh
Confidence 4566777777874 43 322 24678999974 678999999999998754
No 89
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.91 E-value=1.5e-23 Score=209.31 Aligned_cols=318 Identities=12% Similarity=0.056 Sum_probs=209.9
Q ss_pred HHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccc
Q 038818 88 GFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGR 167 (486)
Q Consensus 88 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 167 (486)
..+.+.+...+.. ...|...+...+++ +.+++++|.+.+ .+++|+|||+|+..++.++..
T Consensus 41 ~~v~~a~~~~~~~-~~~y~~~~~~~~l~----~~la~~~~~~~~-------~v~~~~g~~~a~~~~~~~~~~-------- 100 (381)
T 1v2d_A 41 PFLLEAVRRALGR-QDQYAPPAGLPALR----EALAEEFAVEPE-------SVVVTSGATEALYVLLQSLVG-------- 100 (381)
T ss_dssp HHHHHHHHHHTTT-SCSCCCTTCCHHHH----HHHHHHHTSCGG-------GEEEESSHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHHHH-hcCCCCCCCCHHHH----HHHHHhcCCChh-------hEEEcCChHHHHHHHHHHhCC--------
Confidence 3445555555543 23444433444444 556666887654 689999999999888877642
Q ss_pred cCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecC--CCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 168 ENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTT--KSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 168 ~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d--~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
+++.|+++..+|.++..+++..|+ +++.+|++ +. ++.+|+++|++++++. +.+|+++.++|++|.
T Consensus 101 ---~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~-~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~ 167 (381)
T 1v2d_A 101 ---PGDEVVVLEPFFDVYLPDAFLAGA---KARLVRLDLTPE-GFRLDLSALEKALTPR------TRALLLNTPMNPTGL 167 (381)
T ss_dssp ---TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEEETT-EEECCHHHHHTTCCTT------EEEEEEESSCTTTCC
T ss_pred ---CCCEEEEcCCCchhHHHHHHHcCC---EEEEEeCCCCCc-cCCcCHHHHHHhcCcC------CEEEEECCCCCCCCC
Confidence 567788888999999999999999 99999987 32 4789999999988532 457888899999999
Q ss_pred cCC---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHh
Q 038818 246 VDP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKAL 321 (486)
Q Consensus 246 idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~ 321 (486)
+-| +++|+++|++||+++|+|++|+++.. ..............|.++.++||+++.| ..+|+++++++ ... .+
T Consensus 168 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~-~~~-~~ 244 (381)
T 1v2d_A 168 VFGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKE-FMP-RL 244 (381)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTT-THH-HH
T ss_pred ccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHhcCCCEEEEeechhhcCCcccceEEEEeCHH-HHH-HH
Confidence 865 89999999999999999999987543 1111111100236889999999998744 34899888654 222 11
Q ss_pred cCCcccccCccCCCCCccCCCCccccCCCCCCchHH---HHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEec
Q 038818 322 STNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKL---WLVLRSFG-VANLRNFLRSHVRMAQLFQELVGGDNRFEIVA 397 (486)
Q Consensus 322 ~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~---~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 397 (486)
.....+.. . ....+.. ..++.... .++++++.++..++++++.+.|++. ++++..
T Consensus 245 ~~~~~~~~------------------~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 303 (381)
T 1v2d_A 245 AGMRQWTS------------------F--SAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM-GLRVYV 303 (381)
T ss_dssp HHHHHHHT------------------S--SCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT-TCCEEC
T ss_pred HHHHhhcc------------------c--CCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHC-CCEecC
Confidence 10000000 0 0112222 22333211 4667888899999999999999885 888775
Q ss_pred CCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeEC----CEeEEEEEecCCCCcHHHHHHHHH
Q 038818 398 PRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVA----GIYFIRFAVGATLTEDRHVIAAWK 473 (486)
Q Consensus 398 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~----~~~~lR~~~~~~~tt~~did~~i~ 473 (486)
+.....+.+.+.. . + +.+.+.+.|+.+..+..+. +..++|+++.. ++++|+++++
T Consensus 304 ~~~~~~~~~~~~~----------~---~-----~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~---~~~~i~~~~~ 362 (381)
T 1v2d_A 304 PEGTYFLMAELPG----------W---D-----AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK---TEEELHLALE 362 (381)
T ss_dssp CSBSSEEEEECTT----------C---C-----HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS---CHHHHHHHHH
T ss_pred CCcceEEEEecCh----------H---h-----HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC---CHHHHHHHHH
Confidence 4433445555432 1 1 3445556787544333222 35689999853 7889999999
Q ss_pred HHHHHHHHHh
Q 038818 474 VVQEKLDGIL 483 (486)
Q Consensus 474 ~l~~~~~~l~ 483 (486)
.|++++++..
T Consensus 363 ~l~~~l~~~r 372 (381)
T 1v2d_A 363 RLGRVVNSPR 372 (381)
T ss_dssp HHHHHC----
T ss_pred HHHHHHhhcc
Confidence 9999876654
No 90
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.91 E-value=1e-23 Score=209.89 Aligned_cols=321 Identities=13% Similarity=0.074 Sum_probs=210.9
Q ss_pred HHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccC
Q 038818 90 LGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGREN 169 (486)
Q Consensus 90 ~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~ 169 (486)
+.+.+...+... .|...+...+ +++.+++++|.+ .+++++|||+|+..++.+++..
T Consensus 21 ~~~~~~~~~~~~--~~~~~~~~~~----l~~~la~~~~~~---------~~~~~~~gt~a~~~~~~~~~~~--------- 76 (374)
T 3uwc_A 21 YLNDLREFIKTA--DFTLGAELEK----FEKRFAALHNAP---------HAIGVGTGTDALAMSFKMLNIG--------- 76 (374)
T ss_dssp HHHHHHHHHHHT--CCSSCHHHHH----HHHHHHHHTTCS---------EEEEESCHHHHHHHHHHHTTCC---------
T ss_pred HHHHHHHHHHcC--CcccChhHHH----HHHHHHHHhCCC---------cEEEeCCHHHHHHHHHHHcCCC---------
Confidence 555555444332 2334444444 445677788765 4689999999998777765211
Q ss_pred CCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCc
Q 038818 170 ISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPL 249 (486)
Q Consensus 170 ~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl 249 (486)
+++.|+++..+|.++..+++..|+ +++.+|++. ++.+|+++|++++++. +.+|+ +++++|.+.|+
T Consensus 77 -~gd~v~~~~~~~~~~~~~~~~~g~---~~~~~~~~~--~~~~d~~~l~~~~~~~------~~~v~---~~n~~G~~~~~ 141 (374)
T 3uwc_A 77 -AGDEVITCANTFIASVGAIVQAGA---TPVLVDSEN--GYVIDPEKIEAAITDK------TKAIM---PVHYTGNIADM 141 (374)
T ss_dssp -TTCEEEEESSSCHHHHHHHHHTTC---EEEEECBCT--TSSBCGGGTGGGCCTT------EEEEC---CBCGGGCCCCH
T ss_pred -CCCEEEECCCccHHHHHHHHHcCC---EEEEEecCC--CCCcCHHHHHHhCCCC------ceEEE---EeCCcCCcCCH
Confidence 567888999999999999999999 999999973 6799999999988653 23444 77899999999
Q ss_pred hHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccc--cccCCCCcceEEEeeCchHHHHHhcCCccc
Q 038818 250 GPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAH--KWFFTTLDCCCLWVKNPNALIKALSTNPEF 327 (486)
Q Consensus 250 ~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~h--K~l~~p~~~g~~~~~~~~~~~~~~~~~~~y 327 (486)
++|+++|++||+++|+|++|+.+..+...... ...|.+++++| |+++++..+|+++.+++.............
T Consensus 142 ~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~-----~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~~~~~~ 216 (374)
T 3uwc_A 142 PALAKIAKKHNLHIVEDACQTILGRINDKFVG-----SWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNHG 216 (374)
T ss_dssp HHHHHHHHHTTCEEEEECTTCTTCEETTEETT-----SSSSEEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHHHTBTT
T ss_pred HHHHHHHHHcCCEEEEeCCCccCceeCCeecc-----ccccEEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHHHHhcC
Confidence 99999999999999999999865443211111 13699999977 999874447777777665433221111000
Q ss_pred ccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCC-eEEecCCCe---eE
Q 038818 328 LRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNR-FEIVAPRNF---AV 403 (486)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~-~~~~~~~~~---~~ 403 (486)
. .. .+. ....+.......+..++.....++++++.++..++++++.+.|+++++ +++...+.. ..
T Consensus 217 ~-~~--------~~~--~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 285 (374)
T 3uwc_A 217 L-IN--------RDV--CVEYGINCRMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVF 285 (374)
T ss_dssp E-EE--------TTE--ESSCCCBCBCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCC
T ss_pred c-cc--------cCc--cccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceee
Confidence 0 00 000 001111222334444444445577888999999999999999999887 887543321 11
Q ss_pred EEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeee--eE------C---------------CEeEEEEEecC
Q 038818 404 VCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHG--MV------A---------------GIYFIRFAVGA 460 (486)
Q Consensus 404 v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~------~---------------~~~~lR~~~~~ 460 (486)
+.|.+.... ...+.+.|.++|+.+.... .. . ....+|+++ +
T Consensus 286 ~~~~~~~~~---------------~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~-~ 349 (374)
T 3uwc_A 286 HIYVLRVKY---------------RDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPA-H 349 (374)
T ss_dssp SSEEEEETT---------------HHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECC-C
T ss_pred EEEEEEcCC---------------HHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccC-C
Confidence 223332211 2456777777787422211 00 0 126899998 5
Q ss_pred CCCcHHHHHHHHHHHHHHHHH
Q 038818 461 TLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 461 ~~tt~~did~~i~~l~~~~~~ 481 (486)
+.+|++||+++++.|++++++
T Consensus 350 ~~~t~edi~~~~~~l~~~l~~ 370 (374)
T 3uwc_A 350 PYLTEEEINYIIKKVREFYLE 370 (374)
T ss_dssp TTSCHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHh
Confidence 788999999999999998865
No 91
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.91 E-value=8.2e-23 Score=206.48 Aligned_cols=341 Identities=12% Similarity=0.064 Sum_probs=219.0
Q ss_pred HHHHHHhhcCCC-ccccccChhhHHHHHHHHHHHHHH------cCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHH
Q 038818 90 LGEMLSSGFNVV-GFNWMSSPAATELENIVMDWLGEM------LKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQIL 162 (486)
Q Consensus 90 ~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~l~~l------~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~ 162 (486)
+.+.+...+... ...|.......++++.+.+++.+. .|++.. ...+++|+||++|+..++.+...
T Consensus 55 v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~-----~~~v~~~~g~~~al~~~~~~l~~--- 126 (416)
T 1bw0_A 55 QIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIV-----KDNVVLCSGGSHGILMAITAICD--- 126 (416)
T ss_dssp HHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCC-----GGGEEEESHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCC-----cceEEEeCChHHHHHHHHHHhCC---
Confidence 444444444221 234544445678888888888843 232211 12689999999999877776532
Q ss_pred HHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcc
Q 038818 163 NEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTA 242 (486)
Q Consensus 163 ~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~ 242 (486)
+++.|+++..+|.++..+++..|+ +++.+|+++++.+.+|+++|++++++. +.+|+++.++|+
T Consensus 127 --------~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~np 189 (416)
T 1bw0_A 127 --------AGDYALVPQPGFPHYETVCKAYGI---GMHFYNCRPENDWEADLDEIRRLKDDK------TKLLIVTNPSNP 189 (416)
T ss_dssp --------TTCEEEEEESCCTHHHHHHHHTTC---EEEEEEEEGGGTTEECHHHHHHHCCTT------EEEEEEESSCTT
T ss_pred --------CCCEEEEcCCCcHhHHHHHHHcCc---EEEEeecCcccCCCCCHHHHHHHhccC------CeEEEEeCCCCC
Confidence 566788888999999999999999 999999875334689999999988643 346778889999
Q ss_pred ccccCC---chHHHHHHHHhCceEEeeccccchhccCc----cchhhhcCCCC--CCceeeccccccCCC-CcceEEEee
Q 038818 243 ITTVDP---LGPLCDIAKRYSIWVHVDAAYAGSACICP----EFRHFIDGIEG--ADSFSLNAHKWFFTT-LDCCCLWVK 312 (486)
Q Consensus 243 ~G~idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~----~~~~~~~~~~~--aDsi~~~~hK~l~~p-~~~g~~~~~ 312 (486)
+|.+.| +++|+++|++||+++++|++|+.+..... .+.. +..+.. -+.++.+++|+++.| ..+|+++++
T Consensus 190 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~ 268 (416)
T 1bw0_A 190 CGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTS-VADFETTVPRVILGGTAKNLVVPGWRLGWLLYV 268 (416)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCC-TTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEE
T ss_pred CCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccC-HHHccCCCcEEEEecchhhCCCCCceEEEEEee
Confidence 999988 99999999999999999999987432111 1111 122211 134567899998755 458899887
Q ss_pred Cc-hHHHHHhcCCcccccCccCCCCCccCCCCccccCCC-CCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC
Q 038818 313 NP-NALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSR-RFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGD 390 (486)
Q Consensus 313 ~~-~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr-~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 390 (486)
++ ............+... ..+- .....++..++.....++++++.++..++++++.+.|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (416)
T 1bw0_A 269 DPHGNGPSFLEGLKRVGML----------------VCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGEC 332 (416)
T ss_dssp CTTCSCHHHHHHHHHHHHH----------------HTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CchhhHHHHHHHHHHHhcc----------------ccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 75 2211110000000000 0000 0111222333433346778889999999999999999998
Q ss_pred CCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeECCEeEEEEEecCCCCcHHHHH
Q 038818 391 NRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVI 469 (486)
Q Consensus 391 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did 469 (486)
|++++..+.....+.+.+...... + .. + ..++.+.+. ++|+.+..+..+...+++|+++. +++++|+
T Consensus 333 ~g~~~~~~~~~~~~~~~~~~~~~~--~---~~--~--~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~---~~~e~l~ 400 (416)
T 1bw0_A 333 IGLAPTMPRGAMYLMSRIDLEKYR--D---IK--T--DVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTT---RPVEVYR 400 (416)
T ss_dssp TTEEECCCCBTTEEEEEECGGGBS--S---CC--S--HHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC---SCHHHHH
T ss_pred CCCcccCCCeeEEEEEeCCHHHcC--C---CC--C--HHHHHHHHHHHCCEEEecccccCCCCeEEEEec---CCHHHHH
Confidence 899876444445555665421000 0 00 1 234566653 67875544433333568999983 5788999
Q ss_pred HHHHHHHHHHHHHhh
Q 038818 470 AAWKVVQEKLDGILA 484 (486)
Q Consensus 470 ~~i~~l~~~~~~l~~ 484 (486)
++++.|.+++++..+
T Consensus 401 ~~l~~l~~~l~~~~~ 415 (416)
T 1bw0_A 401 EAVERIKAFCQRHAA 415 (416)
T ss_dssp HHHHHHHHHHHHHBC
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999998877543
No 92
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.91 E-value=1.8e-23 Score=212.24 Aligned_cols=341 Identities=11% Similarity=0.063 Sum_probs=220.8
Q ss_pred HHHHHHHhhcCC---CccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCc-ceEEcCCchHHHHHHHHHHHHHHHHH
Q 038818 89 FLGEMLSSGFNV---VGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTG-GGVIQGTTCEAILCTLAAARDQILNE 164 (486)
Q Consensus 89 ~~~~~l~~~~n~---~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~-~~~~t~ggt~a~~~al~~a~~~~~~~ 164 (486)
.+.+.+...++. ....|.......++++.+.+++.+.+|.+.. .. ..++|+||++|+..++.+...
T Consensus 54 ~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~-----~~~~v~~~~g~~~a~~~~~~~~~~----- 123 (429)
T 1yiz_A 54 YALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTIN-----PMTEVLVTVGAYEALYATIQGHVD----- 123 (429)
T ss_dssp HHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCC-----TTTSEEEESHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCC-----CcCCEEEecChHHHHHHHHHHhcC-----
Confidence 445555555543 2334544445688999999999998886432 12 589999999999888777643
Q ss_pred ccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCC--------CcccCHHHHHHHHHHHHHCCCccEEEEe
Q 038818 165 IGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSS--------SFTLTPESLQAAIDLDIQAGLIPLFLCA 236 (486)
Q Consensus 165 ~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~--------~~~~d~~~L~~~l~~~~~~g~~p~~vv~ 236 (486)
++..|+++..+|.++..+++..|. +++.+|.+.++ ++.+|+++|++++++. +.+|++
T Consensus 124 ------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~ 188 (429)
T 1yiz_A 124 ------EGDEVIIIEPFFDCYEPMVKAAGG---IPRFIPLKPNKTGGTISSADWVLDNNELEALFNEK------TKMIII 188 (429)
T ss_dssp ------TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTT------EEEEEE
T ss_pred ------CCCEEEEcCCCchhHHHHHHHcCC---EEEEEeCCcccccccccccCcccCHHHHHHHhccC------ceEEEE
Confidence 556788888999999999999999 99999987632 4689999999988532 457778
Q ss_pred ecCCccccccCC---chHHHHHHHHhCceEEeeccccchhccCccchhh--hcCCCCCCceeeccccccCCC-CcceEEE
Q 038818 237 TVGTTAITTVDP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHF--IDGIEGADSFSLNAHKWFFTT-LDCCCLW 310 (486)
Q Consensus 237 ~~gtt~~G~idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~ 310 (486)
+.++|++|.+-| +++|+++|++||+++++|++|+++.......... +.+..+.|.+..++||+++.| ..+|+++
T Consensus 189 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~ 268 (429)
T 1yiz_A 189 NTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAY 268 (429)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEE
T ss_pred CCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEE
Confidence 899999999975 9999999999999999999998654321111111 111235788899999998733 3489888
Q ss_pred eeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh----c--hHHHHHHHHHHHHHHHHHH
Q 038818 311 VKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF----G--VANLRNFLRSHVRMAQLFQ 384 (486)
Q Consensus 311 ~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~----g--~~g~~~~~~~~~~~a~~l~ 384 (486)
++++ ... .+.....+. +.. .-.....++..++... + .+.+++..++..++++++.
T Consensus 269 ~~~~-~~~-~l~~~~~~~----------------~~~-~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 329 (429)
T 1yiz_A 269 GPEA-LLK-NLQMVHQNC----------------VYT-CATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMA 329 (429)
T ss_dssp SCHH-HHH-HHHHHHHTT----------------TCC-CCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHH
T ss_pred eCHH-HHH-HHHHHHhhc----------------ccC-CChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHH
Confidence 8643 322 221100000 000 0001112233334431 3 4567888888899999999
Q ss_pred HHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC-------CEeEEEE
Q 038818 385 ELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA-------GIYFIRF 456 (486)
Q Consensus 385 ~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~-------~~~~lR~ 456 (486)
+.|+++ ++++..+.....+.+.+.....+..-..... .....++.+.+. ++|+.+..+..+. +..++|+
T Consensus 330 ~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRi 406 (429)
T 1yiz_A 330 SFLAEV-GMNPTVPQGGYFMVADWSSLDSKVDLTQETD--ARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRY 406 (429)
T ss_dssp HHHHHH-TCEEEECSBSSEEEEECCSSCTTTTCCSSSS--SCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEE
T ss_pred HHHHhC-CCcccCCCcceEEEEEccccccccccccccc--CCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEE
Confidence 999887 7887654444566666653200000000000 011345666665 5687543332222 2568999
Q ss_pred EecCCCCcHHHHHHHHHHHHHHH
Q 038818 457 AVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 457 ~~~~~~tt~~did~~i~~l~~~~ 479 (486)
++. +++++|+++++.|++++
T Consensus 407 s~~---~~~e~i~~~l~~l~~~l 426 (429)
T 1yiz_A 407 CFF---KKDENLQKAAEILRKWK 426 (429)
T ss_dssp ECC---SCHHHHHHHHHHHHHHS
T ss_pred Eec---CCHHHHHHHHHHHHHhc
Confidence 985 37889999999998764
No 93
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.91 E-value=4.3e-23 Score=210.74 Aligned_cols=315 Identities=10% Similarity=0.040 Sum_probs=189.5
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ 186 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 186 (486)
..+...++|..+++++++++|.+.+.. +..++++|||+||..++.+... +++.|+++...|.+..
T Consensus 94 G~~~~~~lE~~a~~~~a~l~g~~~~~~----~~~v~~~sGt~An~~al~al~~-----------pGD~Vl~~~~~h~g~l 158 (490)
T 2a7v_A 94 GAEVVDEIELLCQRRALEAFDLDPAQW----GVNVQPYSGSPANLAVYTALLQ-----------PHDRIMGLDLPDGGHL 158 (490)
T ss_dssp ----CTHHHHHHHHHHHHHTTCCTTTE----EEECCCSSHHHHHHHHHHHHCC-----------SCEECCC---------
T ss_pred ccHHHHHHHHHHHHHHHHHcCCCcccC----ceEEeCCchHHHHHHHHHHHcC-----------CCCEecccCccccccc
Confidence 345557899999999999999986410 0135667899999888877643 7788888887775421
Q ss_pred --------HHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHH
Q 038818 187 --------KAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKR 258 (486)
Q Consensus 187 --------~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~ 258 (486)
+.+...|... .++.+++++ +++.+|+++|++++++.. |.+|+++.. ..|...|+++|++||++
T Consensus 159 ~h~~~~~~~~i~~~g~~~-~~~~~~vd~-~~~~iD~d~le~~l~~~~-----~klIi~~~s--~~~~~~dl~~i~~ia~~ 229 (490)
T 2a7v_A 159 THGYMSDVKRISATSIFF-ESMPYKLNP-KTGLIDYNQLALTARLFR-----PRLIIAGTS--AYARLIDYARMREVCDE 229 (490)
T ss_dssp -----------------------CCBCT-TTCSBCHHHHHHHHHHHC-----CSEEEECCS--SCCSCCCHHHHHHHHHH
T ss_pred cchhhhcchhHHHcCCeE-EEEeccccc-ccCCcCHHHHHHHHhhcC-----CcEEEEcCC--CCCCcccHHHHHHHHHH
Confidence 1334555411 234445553 357999999999997542 335555433 34667899999999999
Q ss_pred hCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCch-------------HHHHHhcCCc
Q 038818 259 YSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPN-------------ALIKALSTNP 325 (486)
Q Consensus 259 ~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~-------------~~~~~~~~~~ 325 (486)
||+++|+|+||+.+..........+ +.+|++++++||++++|.| |+++++++. .+.+.+.
T Consensus 230 ~g~~livD~Ah~~glv~~g~~~~~~---~~aDiv~~S~hK~l~Gp~G-G~i~~~~~~~~~~~~~~~~~~~~l~~~i~--- 302 (490)
T 2a7v_A 230 VKAHLLADMAHISGLVAAKVIPSPF---KHADIVTTTTHKTLRGARS-GLIFYRKGVKAVDPKTGREIPYTFEDRIN--- 302 (490)
T ss_dssp TTCEEEEECGGGHHHHHTTSSCCGG---GTCSEEEEESSGGGCSCSC-EEEEEECSEEEEETTTEEEEECCCHHHHH---
T ss_pred cCCEEEEccccccccccCCcCCCCC---CCCCEEEECCcccCccccc-hheeeccchhcccccccchhhHHHHHHHH---
Confidence 9999999999976544332222112 3689999999999988875 888887641 0111110
Q ss_pred ccccCccCCCCCccCCCCccccCCCCCC-chHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC-CCeeE
Q 038818 326 EFLRNKASDSKQVVDYKDWQITLSRRFR-ALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP-RNFAV 403 (486)
Q Consensus 326 ~y~~~~~~~~~~~~~~~~~~~~~sr~~~-~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~ 403 (486)
..++. +.+++.... ..++..++...-.+.+.++.++..+++++|++.|.+. |++++.+ ...++
T Consensus 303 ~~~~~--------------g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~-G~~v~~~~t~t~l 367 (490)
T 2a7v_A 303 FAVFP--------------SLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVSGGTDNHL 367 (490)
T ss_dssp HHHTT--------------TTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSE
T ss_pred HHhcc--------------cCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCCCeE
Confidence 00110 111121111 1233334444333466888899999999999999987 8998753 34567
Q ss_pred EEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeE-----CCEeEEEEEe---cCCCCcHHHHHHHHHHH
Q 038818 404 VCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMV-----AGIYFIRFAV---GATLTEDRHVIAAWKVV 475 (486)
Q Consensus 404 v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-----~~~~~lR~~~---~~~~tt~~did~~i~~l 475 (486)
+.+.+.+... ...++.+.|.+.|+.+-..+.. .....+|+++ ++...+++|++++++.|
T Consensus 368 v~vdl~~~g~-------------~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i 434 (490)
T 2a7v_A 368 VLVDLRPKGL-------------DGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFI 434 (490)
T ss_dssp EEEECTTTTC-------------CHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHH
T ss_pred EEEEeCCCCC-------------CHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHH
Confidence 7776654321 0234555666678753322111 1245799965 23456889999999999
Q ss_pred HHHHH
Q 038818 476 QEKLD 480 (486)
Q Consensus 476 ~~~~~ 480 (486)
.+++.
T Consensus 435 ~~~l~ 439 (490)
T 2a7v_A 435 DEGVN 439 (490)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98875
No 94
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.91 E-value=2.7e-24 Score=219.16 Aligned_cols=292 Identities=11% Similarity=0.009 Sum_probs=192.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHc
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIA 192 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 192 (486)
....++++++++ +|.+. ..++|+|||+||..++.++.. +++.|+++..+|.++..++...
T Consensus 57 ~~~~~~~~~la~-~g~~~--------~v~~~~G~t~a~~~~~~a~~~-----------~gd~Vlv~~~~h~s~~~~~~~~ 116 (446)
T 2x3l_A 57 EVILKSMKQVEK-HSDYD--------GYFLVNGTTSGILSVIQSFSQ-----------KKGDILMARNVHKSVLHALDIS 116 (446)
T ss_dssp SHHHHHHHHHCS-CTTEE--------EEEESSHHHHHHHHHHHTTTT-----------SSSCEEECTTCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHh-cCCCc--------eEEEeCCHHHHHHHHHHHhcC-----------CCCEEEEecCccHHHHHHHHHc
Confidence 345677889999 99863 578999999999888877643 6677889999999999999999
Q ss_pred CCCCCCeEEEec--CCCC--CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeecc
Q 038818 193 GIDPKNFRAIKT--TKSS--SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAA 268 (486)
Q Consensus 193 G~g~~~v~~v~~--d~~~--~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a 268 (486)
|+ +++.++. +++. .+.+|+++| +.++ +.+|+++. +|++|.+.|+++|+++|++||+|+|+|+|
T Consensus 117 G~---~~~~v~~~~~~~~~~~~~~d~~~l---~~~~------~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea 183 (446)
T 2x3l_A 117 QQ---EGHFIETHQSPLTNHYNKVNLSRL---NNDG------HKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEA 183 (446)
T ss_dssp TC---CEEECEEEECTTTSSEEEEEC----------------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECT
T ss_pred CC---eEEEEeCeeccccCcCCCCCHHHH---cCCC------ceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcch
Confidence 99 9999988 5310 057898887 3322 34677777 66699999999999999999999999999
Q ss_pred ccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccC
Q 038818 269 YAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITL 348 (486)
Q Consensus 269 ~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 348 (486)
|++...+.+. ...... .++|+++.++||+++++.++|+++++++..-...+.... .... ..
T Consensus 184 ~~~~~~f~~~-~~~~~~-~g~Di~~~S~~K~l~~~~g~g~l~~~~~~i~~~~~~~~~-~~~~----------------~~ 244 (446)
T 2x3l_A 184 HGAHFGLQGF-PDSTLN-YQADYVVQSFHKTLPALTMGSVLYIHKNAPYRENIIEYL-SYFQ----------------TS 244 (446)
T ss_dssp TCTTTTSTTS-CCCGGG-GTCSEEEECHHHHSSSCTTCEEEEEETTCTTHHHHHHHH-HHHS----------------CS
T ss_pred hhhhhccCCC-CCChHH-cCCCEEEECCccccccccccEEEEEcCCcCCHHHHHHHH-HHHc----------------CC
Confidence 9873323221 100111 158999999999999998999999987632101111000 0000 01
Q ss_pred CCCCC-chHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHH
Q 038818 349 SRRFR-ALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANEL 427 (486)
Q Consensus 349 sr~~~-~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~ 427 (486)
+.... ..++..+++.+...+.+++.++..++++++++. +++++.+.....+.+.+.+..
T Consensus 245 s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~-----g~~~~~~~~~~~l~i~~~~~~--------------- 304 (446)
T 2x3l_A 245 SPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK-----GFEMLQVDDPLKLLIKYEGFT--------------- 304 (446)
T ss_dssp SCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-----TCEEEECSSTTEEEEECTTSC---------------
T ss_pred CchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc-----CCEECcCCCCeEEEEEeCCcC---------------
Confidence 11111 123334445444444445777888888888887 677765433234566553210
Q ss_pred HHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 428 NRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 428 ~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
..++.+.|.++|+. +.. .+..++|++++ ..++++++ +++++|+++.+.+
T Consensus 305 ~~~l~~~L~~~GI~-v~~---~g~~~iRi~~~-~~~t~e~i-~l~~aL~~~~~~~ 353 (446)
T 2x3l_A 305 GHDIQNWFMNAHIY-LEL---ADDYQALAILP-LWHHDDTY-LFDSLLRKIEDMI 353 (446)
T ss_dssp HHHHHHHHHHTTEE-ESE---ECSSCEEEECC-CCCTTCCC-CHHHHHHHHHTCC
T ss_pred HHHHHHHHHHCCCE-EEe---cCCCEEEEEee-cCCCHHHH-HHHHHHHHHHHhh
Confidence 23566677777764 321 23468999985 56677799 9999999987644
No 95
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.91 E-value=6.2e-23 Score=206.12 Aligned_cols=326 Identities=14% Similarity=0.098 Sum_probs=210.3
Q ss_pred HHHHHHHHHhhcCCC---ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHH
Q 038818 87 AGFLGEMLSSGFNVV---GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILN 163 (486)
Q Consensus 87 ~~~~~~~l~~~~n~~---~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~ 163 (486)
+..+.+.+...+... ...|...+...++++.+.+ ++|.+.+ ..++|+||++++..++.+...
T Consensus 49 ~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~----~~g~~~~-------~v~~~~g~~~al~~~~~~~~~---- 113 (397)
T 2zyj_A 49 KEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAE----WIGVRPE-------EVLITTGSQQALDLVGKVFLD---- 113 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHH----HHTSCGG-------GEEEESHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHH----HhCCChh-------hEEEeccHHHHHHHHHHHhCC----
Confidence 344555554444321 1234333345566655544 4476544 689999999999877776532
Q ss_pred HccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEE-EeecCCcc
Q 038818 164 EIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFL-CATVGTTA 242 (486)
Q Consensus 164 ~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~v-v~~~gtt~ 242 (486)
++..|++...+|.++...++..|. +++.+|.++ + .+|+++|++++++. .+.+| +.+.++|+
T Consensus 114 -------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~--~-~~d~~~l~~~l~~~-----~~~~v~~~~~~~np 175 (397)
T 2zyj_A 114 -------EGSPVLLEAPSYMGAIQAFRLQGP---RFLTVPAGE--E-GPDLDALEEVLKRE-----RPRFLYLIPSFQNP 175 (397)
T ss_dssp -------TTCEEEEEESCCHHHHHHHHTTCC---EEEEEEEET--T-EECHHHHHHHHHHC-----CCSCEEECCBSCTT
T ss_pred -------CCCEEEEeCCCcHHHHHHHHHcCC---EEEecCcCC--C-CCCHHHHHHHHhhc-----CCeEEEECCCCcCC
Confidence 556788888999999999999999 999999875 3 39999999999751 12244 56888999
Q ss_pred ccccCCc---hHHHHHHHHhCceEEeeccccchhccCccchhhhcCC--C---CCCceeeccccccCCCCcceEEEeeCc
Q 038818 243 ITTVDPL---GPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGI--E---GADSFSLNAHKWFFTTLDCCCLWVKNP 314 (486)
Q Consensus 243 ~G~idpl---~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~--~---~aDsi~~~~hK~l~~p~~~g~~~~~~~ 314 (486)
+|.+-|. ++|+++|++||+++++|++|+.+......... +..+ . .-..+..++||+++....+|++++++
T Consensus 176 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~- 253 (397)
T 2zyj_A 176 TGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPS-LFELAREAGYPGVIYLGSFSKVLSPGLRVAFAVAHP- 253 (397)
T ss_dssp TCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCC-HHHHHHHHTCCCEEEEEESTTTTCGGGCCEEEECCH-
T ss_pred CCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCc-hhhhCcccCCCeEEEEecccccccccceeEEEecCH-
Confidence 9998775 48999999999999999999875432111011 1111 1 12266788999999335689888863
Q ss_pred hHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHHhC-C
Q 038818 315 NALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGV---ANLRNFLRSHVRMAQLFQELVGG-D 390 (486)
Q Consensus 315 ~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~---~g~~~~~~~~~~~a~~l~~~L~~-~ 390 (486)
+...........+. .+ ...+..+++...+.. +.++++.++..++++++.+.|++ +
T Consensus 254 ~~~~~l~~~~~~~~-------------------~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 312 (397)
T 2zyj_A 254 EALQKLVQAKQGAD-------------------LH--TPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREV 312 (397)
T ss_dssp HHHHHHHHHHHHHH-------------------SS--CCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhhc-------------------CC--CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 33221111000000 00 122333333333322 45677778888899999999987 5
Q ss_pred C-CeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeEC----CEeEEEEEecCCCCcH
Q 038818 391 N-RFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVA----GIYFIRFAVGATLTED 465 (486)
Q Consensus 391 ~-~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~----~~~~lR~~~~~~~tt~ 465 (486)
| ++++..+.....+.+.+.... + ..++.+.|.++|+.+..+..+. +..++|+++..+ ++
T Consensus 313 ~~g~~~~~~~~g~~~~~~~~~~~------------~--~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~--~~ 376 (397)
T 2zyj_A 313 PKEVRYTRPKGGMFVWMELPKGL------------S--AEGLFRRALEENVAFVPGGPFFANGGGENTLRLSYATL--DR 376 (397)
T ss_dssp CTTSEECCCSBSSEEEEECSTTC------------C--HHHHHHHHHHTTEEEEESGGGCTTSCCTTEEEEECSSS--CH
T ss_pred CCCeEEccCCccEEEEEEcCCCC------------C--HHHHHHHHHHCCCEEechHHhcCCCCCCCeEEEEcCCC--CH
Confidence 7 588765544556666664210 1 2456777777887544433231 356899999643 78
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 038818 466 RHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 466 ~did~~i~~l~~~~~~l~~ 484 (486)
++|+++++.|.++++++.+
T Consensus 377 ~~i~~~~~~l~~~l~~~~~ 395 (397)
T 2zyj_A 377 EGIAEGVRRLGRALKGLLA 395 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 8999999999999887653
No 96
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.91 E-value=7.7e-24 Score=213.23 Aligned_cols=330 Identities=11% Similarity=0.042 Sum_probs=212.3
Q ss_pred HHHHHHHHHhhcCC-Cccccc------cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHH
Q 038818 87 AGFLGEMLSSGFNV-VGFNWM------SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARD 159 (486)
Q Consensus 87 ~~~~~~~l~~~~n~-~~~~~~------~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~ 159 (486)
+..+.+.+...+.. ....|. ..+....+|+.+++++++++|.+.. -+++++||+|+..++.++..
T Consensus 36 ~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~~~--------~i~~~sGt~a~~~~~~~~~~ 107 (407)
T 2dkj_A 36 SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAWA--------NVQPHSGSQANMAVYMALME 107 (407)
T ss_dssp CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEE--------ECCCSSHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCCcc--------eEEecchHHHHHHHHHHhcC
Confidence 44455666555532 222221 2333346777777899999998643 35556678888888777632
Q ss_pred HHHHHccccCCCCeEEEecCCCchHH---HHHHHHcCCCCCCeEEEecCCC-CCcccCHHHHHHHHHHHHHCCCccEEEE
Q 038818 160 QILNEIGRENISRLVVYGSDQTHSAL---QKAAQIAGIDPKNFRAIKTTKS-SSFTLTPESLQAAIDLDIQAGLIPLFLC 235 (486)
Q Consensus 160 ~~~~~~~~~~~~~~~v~~s~~~H~s~---~~a~~~~G~g~~~v~~v~~d~~-~~~~~d~~~L~~~l~~~~~~g~~p~~vv 235 (486)
++..|+++..+|.++ ..+++..|. .+..++++.+ +++.+|+++|++++++.. +.+|+
T Consensus 108 -----------~gd~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-----~~~v~ 168 (407)
T 2dkj_A 108 -----------PGDTLMGMDLAAGGHLTHGSRVNFSGK---LYKVVSYGVRPDTELIDLEEVRRLALEHR-----PKVIV 168 (407)
T ss_dssp -----------TTCEEEEECGGGTCCGGGTCTTSHHHH---HSEEEEECCCTTTSSCCHHHHHHHHHHHC-----CSEEE
T ss_pred -----------CCCEEEEecccccCccchHHHHHhcCc---eEEEEecCCCcccCccCHHHHHHHHhhcC-----CeEEE
Confidence 566788888888776 355555565 4455555311 257899999999997531 23566
Q ss_pred eecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCch
Q 038818 236 ATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPN 315 (486)
Q Consensus 236 ~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~ 315 (486)
++.+.+ |.+.|+++|.++|++||+++++|++|+.++...+.... .++..|.++.++||+++++.+ |+++++++.
T Consensus 169 ~~~p~~--~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~---~~~~~di~~~s~sK~l~g~~~-G~~~~~~~~ 242 (407)
T 2dkj_A 169 AGASAY--PRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPN---PLPYAHVVTSTTHKTLRGPRG-GLILSNDPE 242 (407)
T ss_dssp ECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCC---CTTTCSEEEEESSGGGCCCSC-EEEEESCHH
T ss_pred Eecccc--CCCCCHHHHHHHHHHcCCEEEEEccccccccccCccCC---ccccccEEEEeccccCCCCCc-eEEEECCHH
Confidence 655555 47889999999999999999999999875543322111 123479999999999988875 888887554
Q ss_pred HHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCC-chHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Q 038818 316 ALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFR-ALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFE 394 (486)
Q Consensus 316 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~-~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 394 (486)
...........+. ..+.... ..++..++..+..++++++.++..++++++.+.|+++ +++
T Consensus 243 ~~~~l~~~~~~~~------------------~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 303 (407)
T 2dkj_A 243 LGKRIDKLIFPGI------------------QGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARR-GYR 303 (407)
T ss_dssp HHHHHHHHHTTTT------------------CSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred HHHHHHhhhcccc------------------cCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-Cce
Confidence 4332111000010 0010111 1233445554445678899999999999999999988 888
Q ss_pred EecC-CCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeee------ECCEeEEEEEecCC---CCc
Q 038818 395 IVAP-RNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGM------VAGIYFIRFAVGAT---LTE 464 (486)
Q Consensus 395 ~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~------~~~~~~lR~~~~~~---~tt 464 (486)
++.+ ...+++++.+.... . ....+.+.|.+.|+.+..+.. .....++|+++..+ ..+
T Consensus 304 ~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~ 370 (407)
T 2dkj_A 304 IVTGGTDNHLFLVDLRPKG---------L----TGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFT 370 (407)
T ss_dssp EGGGSCSSSEEEEECGGGT---------C----CHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCC
T ss_pred eecCCCCceEEEEECcccC---------C----CHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCC
Confidence 8753 45677777775311 0 123566677777875433221 11246799998532 267
Q ss_pred HHHHHHHHHHHHHHHHH
Q 038818 465 DRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 465 ~~did~~i~~l~~~~~~ 481 (486)
++|+++++++|++++++
T Consensus 371 ~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 371 PEEMPLVAELIDRALLE 387 (407)
T ss_dssp GGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 88999999999998766
No 97
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.91 E-value=4.7e-23 Score=219.52 Aligned_cols=325 Identities=11% Similarity=0.005 Sum_probs=206.7
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHH-HHHcCC
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKA-AQIAGI 194 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a-~~~~G~ 194 (486)
.++.+.+++++|.+. ..++++|+|+||..++.+... +++.|+++...|.|+..+ ++..|+
T Consensus 176 ~e~e~~lA~~~gae~--------~i~v~nGtt~an~~ai~al~~-----------pGD~VLv~~~~H~S~~~~~~~l~Ga 236 (730)
T 1c4k_A 176 VAAEKHAARVYNADK--------TYFVLGGSSNANNTVTSALVS-----------NGDLVLFDRNNHKSVYNSALAMAGG 236 (730)
T ss_dssp HHHHHHHHHHTTCSE--------EEEESSHHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHTTTTCC
T ss_pred HHHHHHHHHHHCCCc--------EEEECCHHHHHHHHHHHHhcC-----------CCCEEEEcCCchHHHHHHHHHHCCC
Confidence 456688999999874 357788878999887776543 677899999999999988 888888
Q ss_pred CCCCeEEEecCCCC---CcccCHHHH-----HHHHHHH-HH--CCCcc-EEEEeecCCccccccCCchHHHHHHHHhCce
Q 038818 195 DPKNFRAIKTTKSS---SFTLTPESL-----QAAIDLD-IQ--AGLIP-LFLCATVGTTAITTVDPLGPLCDIAKRYSIW 262 (486)
Q Consensus 195 g~~~v~~v~~d~~~---~~~~d~~~L-----~~~l~~~-~~--~g~~p-~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~ 262 (486)
+++.++.+.++ .+.+|+++| +++|++. .+ ....| .+|+++.+ |++|.+.|+++|+++|++||++
T Consensus 237 ---~~v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~ 312 (730)
T 1c4k_A 237 ---RPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDY 312 (730)
T ss_dssp ---EEEEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSE
T ss_pred ---EEEEEeCCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCe
Confidence 88888765321 135788888 7777543 11 01123 46777776 5799999999999999999999
Q ss_pred EEeeccccchhccCccchh--hhcC-CCCCC----ceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCC
Q 038818 263 VHVDAAYAGSACICPEFRH--FIDG-IEGAD----SFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDS 335 (486)
Q Consensus 263 lhvD~a~g~~~~~~~~~~~--~~~~-~~~aD----si~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~ 335 (486)
+|||+||+++..+.+..++ .+.. ..++| +++.++||++++|.++|+++++++... ....++...
T Consensus 313 livDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~-----g~~~~i~~~---- 383 (730)
T 1c4k_A 313 IEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIK-----GQLRYCDHK---- 383 (730)
T ss_dssp EEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGT-----TSTTCCCHH----
T ss_pred EEEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhhc-----CcccccCHH----
Confidence 9999999865544443321 1110 11577 899999999999988999999887431 000111000
Q ss_pred CCccCCCCccccCCCCC--CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEecCCC------------
Q 038818 336 KQVVDYKDWQITLSRRF--RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGG-DNRFEIVAPRN------------ 400 (486)
Q Consensus 336 ~~~~~~~~~~~~~sr~~--~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~~------------ 400 (486)
..+......+.+... ...++-.+++.+..++..+++++..++++++++.|++ +++++++.+..
T Consensus 384 --~~~~~~~~~~stsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~ 461 (730)
T 1c4k_A 384 --HFNNSFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTE 461 (730)
T ss_dssp --HHHHHHHHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHH
T ss_pred --HHHHHHHHhCCCCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccc
Confidence 000000001111111 1123333444444434466788999999999999988 78999865421
Q ss_pred ------------------------e---eE----EEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeEC
Q 038818 401 ------------------------F---AV----VCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVA 449 (486)
Q Consensus 401 ------------------------~---~~----v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~ 449 (486)
. .+ +.|...+... .++ +....+.....+.+.|.++|+. +.. .
T Consensus 462 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~--~~g-~~~~~g~~~~~l~~~L~e~GI~-v~~---~ 534 (730)
T 1c4k_A 462 DMANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINP--ETG-DYEDFGVPATIVANYLRDHGII-PEK---S 534 (730)
T ss_dssp HHTTCGGGGBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEET--TTT-EECSSCCCHHHHHHHHHHTTCC-CSE---E
T ss_pred cccccchhhccCccchhccccccCCcccccCCeEEEEEeCCccc--ccc-cccccCCCHHHHHHHHHHCCcE-EEE---C
Confidence 0 01 4454421000 000 0000011134566677777863 322 2
Q ss_pred CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 450 GIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 450 ~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
+...+|+++ ++.+|++++++++++|.++.+.+
T Consensus 535 ~~~~ir~~~-s~g~t~e~i~~Ll~aL~~i~~~~ 566 (730)
T 1c4k_A 535 DLNSILFLM-TPAETPAKMNNLITQLLQLQRLI 566 (730)
T ss_dssp CSSEEEEEC-CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEe-CCCCCHHHHHHHHHHHHHHHHhc
Confidence 345789887 57889999999999999987654
No 98
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.91 E-value=4.4e-23 Score=205.13 Aligned_cols=314 Identities=12% Similarity=0.072 Sum_probs=212.7
Q ss_pred HHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccc
Q 038818 88 GFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGR 167 (486)
Q Consensus 88 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 167 (486)
..+.+.+...+......|...+...++++.+.+++.+.+|.+... ...++|+||++|+..++.+...
T Consensus 45 ~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~-----~~v~~~~g~~~a~~~~~~~~~~-------- 111 (370)
T 2z61_A 45 KPIVDEGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADIIP-----DNIIITGGSSLGLFFALSSIID-------- 111 (370)
T ss_dssp HHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCCG-----GGEEEESSHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCh-----hhEEECCChHHHHHHHHHHhcC--------
Confidence 344455544443323345444557889999999999988864321 2789999999999888777632
Q ss_pred cCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC
Q 038818 168 ENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD 247 (486)
Q Consensus 168 ~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id 247 (486)
+++.|+++..+|.++..+++..|. +++.+| +|+++|++++++. +.+|+++.++|++|.+.
T Consensus 112 ---~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~--------~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~ 171 (370)
T 2z61_A 112 ---DGDEVLIQNPCYPCYKNFIRFLGA---KPVFCD--------FTVESLEEALSDK------TKAIIINSPSNPLGEVI 171 (370)
T ss_dssp ---TTCEEEEESSCCTHHHHHHHHTTC---EEEEEC--------SSHHHHHHHCCSS------EEEEEEESSCTTTCCCC
T ss_pred ---CCCEEEEeCCCchhHHHHHHHcCC---EEEEeC--------CCHHHHHHhcccC------ceEEEEcCCCCCcCccc
Confidence 567788899999999999999999 888886 5899999888642 45677889999999999
Q ss_pred CchHHHHHHHHhCceEEeeccccchhccCccchhh--hcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcC-
Q 038818 248 PLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHF--IDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALST- 323 (486)
Q Consensus 248 pl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~- 323 (486)
|++ |.++|++||+++++|++|+.+.... ..... +.+....|.+..++||+++.| ..+|+++.+++ ... .+..
T Consensus 172 ~~~-l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-~~~-~~~~~ 247 (370)
T 2z61_A 172 DRE-IYEFAYENIPYIISDEIYNGLVYEG-KCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDE-IIE-AILKL 247 (370)
T ss_dssp CHH-HHHHHHHHCSEEEEECTTTTCBSSS-CCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCHH-HHH-HHHHH
T ss_pred CHH-HHHHHHHcCCEEEEEcchhhcccCC-CCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECHH-HHH-HHHHH
Confidence 999 9999999999999999998754321 11111 112336788899999999733 34788887653 322 2211
Q ss_pred CcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCC
Q 038818 324 NPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF---GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRN 400 (486)
Q Consensus 324 ~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~ 400 (486)
...+.. ....+..+++...+ +.++++++.++..++++++.+.|+++ ++++.. +.
T Consensus 248 ~~~~~~---------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~ 304 (370)
T 2z61_A 248 QQNLFI---------------------SAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF-GWEVNN-PI 304 (370)
T ss_dssp HHHHTS---------------------SSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCCC-CC
T ss_pred Hhhccc---------------------CCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc-CCeecC-CC
Confidence 000000 11223333333333 35567788888899999999999887 777653 34
Q ss_pred eeEEE-EEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 401 FAVVC-FRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 401 ~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
.+.+. +.+... ..++.+.+. +.|+.+..+..+. +..++|+++. +++++|+++++.|.
T Consensus 305 ~~~~~~~~~~~~----------------~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~---~~~~~i~~~~~~l~ 365 (370)
T 2z61_A 305 GAYYVFPNIGED----------------GREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA---NSYENIKEGLERIK 365 (370)
T ss_dssp BTTEECCBCSSC----------------HHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC---SCHHHHHHHHHHHH
T ss_pred cceEEEEecCCC----------------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe---CCHHHHHHHHHHHH
Confidence 34333 333211 235666665 5687544332222 3568999985 57789999999998
Q ss_pred HHHH
Q 038818 477 EKLD 480 (486)
Q Consensus 477 ~~~~ 480 (486)
++++
T Consensus 366 ~~l~ 369 (370)
T 2z61_A 366 EFLN 369 (370)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8753
No 99
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.91 E-value=6.2e-22 Score=196.86 Aligned_cols=294 Identities=14% Similarity=0.063 Sum_probs=206.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH
Q 038818 111 ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ 190 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 190 (486)
..++++.+.+++.+.+|++... ...++|+|+++++..++.+... +++.|+++..+|.++..+++
T Consensus 71 ~~~l~~~la~~l~~~~g~~~~~-----~~v~~~~G~~~al~~~~~~l~~-----------~gd~Vl~~~~~y~~~~~~~~ 134 (369)
T 3cq5_A 71 AVELRDELAAYITKQTGVAVTR-----DNLWAANGSNEILQQLLQAFGG-----------PGRTALGFQPSYSMHPILAK 134 (369)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHCS-----------TTCEEEEEESSCTHHHHHHH
T ss_pred HHHHHHHHHHhhhhcccCCCCh-----HhEEECCChHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHH
Confidence 3689999999999887765221 2689999999988777766532 56678888899999999999
Q ss_pred HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeecccc
Q 038818 191 IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYA 270 (486)
Q Consensus 191 ~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g 270 (486)
..|. +++.+|.+. ++.+|+++|++++++. .+.+|+++.++|++|.+.|++++.++|+.+++++++|++|+
T Consensus 135 ~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~ 204 (369)
T 3cq5_A 135 GTHT---EFIAVSRGA--DFRIDMDVALEEIRAK-----QPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYA 204 (369)
T ss_dssp HTTC---EEEEEECCT--TSSCCHHHHHHHHHHH-----CCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTG
T ss_pred HcCC---EEEEecCCc--CCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCch
Confidence 9999 999999864 5689999999999762 13367778999999999999999999999999999999998
Q ss_pred chhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCC
Q 038818 271 GSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLS 349 (486)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~s 349 (486)
.+... .............+.+..++||+++.| ..+|+++++++ ... .+...... +
T Consensus 205 ~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-~~~-~l~~~~~~----------------~----- 260 (369)
T 3cq5_A 205 EFSPS-PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPA-FID-AVMLVRLP----------------Y----- 260 (369)
T ss_dssp GGCCS-CCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTH-HHH-HHHTTSCT----------------T-----
T ss_pred hhcCC-cchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHH-HHH-HHHHcCCC----------------C-----
Confidence 76532 111111111111457888999999744 45788888654 332 22111000 0
Q ss_pred CCCCchHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHH
Q 038818 350 RRFRALKLWLVLRSFG-VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELN 428 (486)
Q Consensus 350 r~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~ 428 (486)
....+..+++...+. .+.+++..++..++++++.+.|++. ++++. ++..+++.+.+... .
T Consensus 261 -~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~----------------~ 321 (369)
T 3cq5_A 261 -HLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEEL-GYAVV-PSESNFVFFGDFSD----------------Q 321 (369)
T ss_dssp -CSCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHHH-TCEEE-CCSSSEEEEECCSS----------------H
T ss_pred -CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEC-CCCCeEEEEECCCC----------------H
Confidence 022344444444432 3457778888889999999999874 78876 55566676665311 2
Q ss_pred HHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 429 RKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 429 ~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
.++.+.+.++|+. +.+. ....++|+++. +++|+++++++|+++++
T Consensus 322 ~~l~~~l~~~gi~-v~~~--~~~~~iRis~~----~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 322 HAAWQAFLDRGVL-IRDV--GIAGHLRTTIG----VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp HHHHHHHHHTTEE-CBCC--SCTTEEEEECC----CHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCEE-EEEC--CCCCeEEEEeC----CHHHHHHHHHHHHHHHh
Confidence 3566667677864 3333 22468999984 67899999999998753
No 100
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.91 E-value=2.7e-23 Score=207.91 Aligned_cols=324 Identities=15% Similarity=0.097 Sum_probs=212.6
Q ss_pred HHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccC
Q 038818 90 LGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGREN 169 (486)
Q Consensus 90 ~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~ 169 (486)
+.+.+...+......|.......++++.+.+|+.+.+|.+.+ ....++|+||++|+..++.+...
T Consensus 49 v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~-----~~~i~~t~g~~~al~~~~~~l~~---------- 113 (385)
T 1b5p_A 49 VKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVT-----PEETIVTVGGSQALFNLFQAILD---------- 113 (385)
T ss_dssp HHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCC-----GGGEEEESHHHHHHHHHHHHHCC----------
T ss_pred HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-----hHHEEEcCChHHHHHHHHHHhcC----------
Confidence 344444333222234544445688999999999998886432 12789999999999887766532
Q ss_pred CCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC-
Q 038818 170 ISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP- 248 (486)
Q Consensus 170 ~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp- 248 (486)
+++.|+++..+|.++...++..|. +++.+|+++.+++.+|+++|++++++. +.+|+++.++|+||.+-|
T Consensus 114 -~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~NPtG~~~~~ 183 (385)
T 1b5p_A 114 -PGDEVIVLSPYWVSYPEMVRFAGG---VVVEVETLPEEGFVPDPERVRRAITPR------TKALVVNSPNNPTGAVYPK 183 (385)
T ss_dssp -TTCEEEEEESCCTHHHHHHHHTTC---EEEEEECCGGGTTCCCHHHHHTTCCTT------EEEEEEESSCTTTCCCCCH
T ss_pred -CCCEEEEcCCCchhHHHHHHHcCC---EEEEeecCcccCCCCCHHHHHHhcCCC------CEEEEEeCCCCCCCCCcCH
Confidence 567788888999999999999999 999999975335789999999988642 447788899999999855
Q ss_pred --chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCC-CCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCC
Q 038818 249 --LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIE-GADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTN 324 (486)
Q Consensus 249 --l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~-~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~ 324 (486)
+++|+++|++||+++++|++|+.+.... .... +..+. ..+.+..+++|+++.| ..+|+++.++ ..........
T Consensus 184 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~-~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~-~~~~~l~~~~ 260 (385)
T 1b5p_A 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFS-PGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPK-EVIKAMASVS 260 (385)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTTTCBSSS-CCCC-GGGTCTTTEEEEEESTTTTTCGGGCCEEEECCH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCC-HHHcCCCCEEEEEechhhcCCcccceEEEEeCH-HHHHHHHHHH
Confidence 8999999999999999999997643311 1111 11111 3456677899999754 3488888754 3322111100
Q ss_pred cccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh-----chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC
Q 038818 325 PEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF-----GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR 399 (486)
Q Consensus 325 ~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~-----g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 399 (486)
.+. +.....+..+++...+ +.+.+++..++..++++++.+.|+++ ++++.. +
T Consensus 261 -~~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~ 317 (385)
T 1b5p_A 261 -RQS--------------------TTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKAVR-P 317 (385)
T ss_dssp -HTT--------------------TCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCC-C
T ss_pred -hhc--------------------cCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCeecC-C
Confidence 000 0011223333333333 34557778888888999999999887 777653 4
Q ss_pred CeeEE-EEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 400 NFAVV-CFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 400 ~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
..+.+ ...+.... . + ..++.+.|.++|+.+..+..+...+++|++++ +++++|+++++.|.++
T Consensus 318 ~~~~~~~~~~~~~~---------~--~--~~~l~~~l~~~gv~v~~g~~f~~~~~iRis~~---~~~~~i~~~l~~l~~~ 381 (385)
T 1b5p_A 318 SGAFYVLMDTSPIA---------P--D--EVRAAERLLEAGVAVVPGTDFAAFGHVRLSYA---TSEENLRKALERFARV 381 (385)
T ss_dssp SBTTEEEEECTTTC---------S--S--HHHHHHHHHHTTEECEESGGGTCTTEEEEECC---SCHHHHHHHHHHGGGG
T ss_pred CeeEEEEEecCCCC---------C--C--HHHHHHHHHHCCeEEecccccCCCCeEEEEec---CCHHHHHHHHHHHHHH
Confidence 43333 33332111 0 1 23566777777875444433322468999984 5777999999888765
Q ss_pred HH
Q 038818 479 LD 480 (486)
Q Consensus 479 ~~ 480 (486)
++
T Consensus 382 l~ 383 (385)
T 1b5p_A 382 LG 383 (385)
T ss_dssp C-
T ss_pred Hh
Confidence 43
No 101
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.91 E-value=7.7e-23 Score=206.49 Aligned_cols=334 Identities=11% Similarity=0.049 Sum_probs=216.3
Q ss_pred HHHHHHHHhhcCCC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcc
Q 038818 88 GFLGEMLSSGFNVV-GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIG 166 (486)
Q Consensus 88 ~~~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 166 (486)
..+.+.+...+... ...|...+...++++.+.+++.+.+|.+.+. ...+++|+||++|+..++.+...
T Consensus 53 ~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~----~~~v~~t~g~~~a~~~~~~~~~~------- 121 (412)
T 2x5d_A 53 PHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDP----ESEAIVTIGSKEGLAHLMLATLD------- 121 (412)
T ss_dssp HHHHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCCT----TTSEEEESCHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CcCEEEcCChHHHHHHHHHHhCC-------
Confidence 34555565555432 2345444557889999999998888864210 01689999999999888776532
Q ss_pred ccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 167 RENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 167 ~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
+++.|+++..+|.++...++..|. +++.+|+++++.+.+|+++|++++++. +.+|+++.++|++|.+
T Consensus 122 ----~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~l~~p~nptG~~ 188 (412)
T 2x5d_A 122 ----HGDTILVPNPSYPIHIYGAVIAGA---QVRSVPLVPGIDFFNELERAIRESIPK------PRMMILGFPSNPTAQC 188 (412)
T ss_dssp ----TTCEEEEEESCCHHHHHHHHHHTC---EEEEEECSTTSCHHHHHHHHHHTEESC------CSEEEEESSCTTTCCC
T ss_pred ----CCCEEEEcCCCchhHHHHHHHcCC---EEEEeecCCccCCCCCHHHHHHhcccC------ceEEEECCCCCCCCCc
Confidence 566788888999999999999999 999999986424568999999887632 3467778899999998
Q ss_pred CC---chHHHHHHHHhCceEEeeccccchhccCccchhh--hcCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHH
Q 038818 247 DP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHF--IDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKA 320 (486)
Q Consensus 247 dp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~ 320 (486)
-| +++|+++|++||+++++|++|+.+.......... +.+....|.++.++||+++ ....+|++++++ .... .
T Consensus 189 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~~-~ 266 (412)
T 2x5d_A 189 VELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNP-ELVS-A 266 (412)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECH-HHHH-H
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcCH-HHHH-H
Confidence 65 6889999999999999999998754321111111 1111356788999999997 334678888753 3322 2
Q ss_pred hcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC
Q 038818 321 LSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP 398 (486)
Q Consensus 321 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 398 (486)
+.....+.. . ....+..+++...+ +.++++++.++..++++++.+.|+++ ++++. +
T Consensus 267 l~~~~~~~~------------------~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~ 324 (412)
T 2x5d_A 267 LARIKSYHD------------------Y--GTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREA-GWMVE-N 324 (412)
T ss_dssp HHHHHHHHC------------------C--CCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHH-TCCCC-C
T ss_pred HHHHHhhhc------------------c--CCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEec-C
Confidence 211000000 0 11223333333333 35677888888999999999999887 77765 3
Q ss_pred CCee-EEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHh-cCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHH
Q 038818 399 RNFA-VVCFRVLPSASGLGDGKANEGANELNRKLLESINA-SGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKV 474 (486)
Q Consensus 399 ~~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~ 474 (486)
+..+ .+.+.+... .. .....++.+.|.+ .|+.+..+..+. +..++|+++.. ++++|+++++.
T Consensus 325 ~~~g~~~~~~~~~~---------~~--~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~---~~~~l~~~l~~ 390 (412)
T 2x5d_A 325 PKASMYVWAKIPEP---------YA--HLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE---NRDRLRQAVRG 390 (412)
T ss_dssp CSBSSEEEEECCTT---------TG--GGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS---CHHHHHHHHHH
T ss_pred CCeeeEEEEEcCCc---------cC--CCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC---CHHHHHHHHHH
Confidence 4444 445555321 00 0012356666654 587544333222 25689999853 67899999999
Q ss_pred HHHHHHHHh
Q 038818 475 VQEKLDGIL 483 (486)
Q Consensus 475 l~~~~~~l~ 483 (486)
|.++++++.
T Consensus 391 l~~~l~~~~ 399 (412)
T 2x5d_A 391 IKAMFRADG 399 (412)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHhcC
Confidence 999887643
No 102
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.90 E-value=1.3e-23 Score=210.54 Aligned_cols=303 Identities=12% Similarity=0.096 Sum_probs=200.6
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDP 196 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~ 196 (486)
++++.+++++|.+ .+++++|||+|+..++.++... ++..|+++..+|.+...+++..|+
T Consensus 60 ~l~~~la~~~~~~---------~~i~~~~gt~al~~~l~~~~~~----------~gd~vl~~~~~~~~~~~~~~~~g~-- 118 (391)
T 3dr4_A 60 EFEKAFADYCGVK---------HAIACNNGTTALHLALVAMGIG----------PGDEVIVPSLTYIASANSVTYCGA-- 118 (391)
T ss_dssp HHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHHHTCC----------TTCEEEEESSSCTHHHHHHHHTTC--
T ss_pred HHHHHHHHHhCCC---------cEEEeCCHHHHHHHHHHHcCCC----------CcCEEEECCCchHHHHHHHHHCCC--
Confidence 3445567777764 4689999999998888776211 567888999999999999999999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccC
Q 038818 197 KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACIC 276 (486)
Q Consensus 197 ~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~ 276 (486)
+++.+++++ +++.+|+++|+++++++ +.+|+ +++++|.+.|+++|+++|++||+++++|+||+.+....
T Consensus 119 -~~~~~~~~~-~~~~~d~~~l~~~~~~~------~~~v~---~~n~tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~ 187 (391)
T 3dr4_A 119 -TPVLVDNDP-RTFNLDAAKLEALITPR------TKAIM---PVHLYGQICDMDPILEVARRHNLLVIEDAAEAVGATYR 187 (391)
T ss_dssp -EEEEECBCT-TTCSBCGGGSGGGCCTT------EEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEET
T ss_pred -EEEEEecCc-cccCcCHHHHHHhcCCC------ceEEE---EECCCCChhhHHHHHHHHHHcCCEEEEECcccccceEC
Confidence 999999985 35799999999988643 33444 45789999999999999999999999999998655443
Q ss_pred ccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchH
Q 038818 277 PEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALK 356 (486)
Q Consensus 277 ~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~ 356 (486)
+.... .+..+++++++.||+++++ .+|+++.+++.......... .+ ... ... .+ +....+..+....
T Consensus 188 ~~~~~---~~~di~~~S~s~~K~l~~g-~gg~~~~~~~~~~~~~~~~~-~~-g~~---~~~--~~--~~~~~g~~~~~~~ 254 (391)
T 3dr4_A 188 GKKSG---SLGDCATFSFFGNAIITTG-EGGMITTNDDDLAAKMRLLR-GQ-GMD---PNR--RY--WFPIVGFNYRMTN 254 (391)
T ss_dssp TEETT---SSSSEEEEECBTTSSSCCB-SCEEEEESCHHHHHHHHHHH-BT-TCC---TTS--TT--CCSSCCCBCBCCH
T ss_pred Ceeec---ccCCEEEEECCCCCcCCcC-CeEEEEECCHHHHHHHHHHH-hc-CCC---CCC--cc--cccccccccCCCH
Confidence 32111 1223556666689999764 46666666654432211100 00 000 000 00 0111122233444
Q ss_pred HHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC--C-----CeeEEEEEeecCCCCCCCCCCccchHHHHH
Q 038818 357 LWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP--R-----NFAVVCFRVLPSASGLGDGKANEGANELNR 429 (486)
Q Consensus 357 ~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~-----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 429 (486)
+.+++.....++++++.++..++++++.+.|+++ ++++..+ + ...++.+.+.... +....
T Consensus 255 l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~i~~~~~~------------~~~~~ 321 (391)
T 3dr4_A 255 IQAAIGLAQLERVDEHLAARERVVGWYEQKLARL-GNRVTKPHVALTGRHVFWMYTVRLGEGL------------STTRD 321 (391)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHGGG-TTSEECCCCCTTSCCCCSSEEEEECSSC------------SSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CccccCcCCCCCCcceeEEEEEEECCcc------------chhHH
Confidence 4555554455778889999999999999999988 8877654 2 1224556554310 00134
Q ss_pred HHHHHHHhcCcEEEeeee-------E-------------CCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 430 KLLESINASGQLYVSHGM-------V-------------AGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 430 ~l~~~l~~~g~~~~~~~~-------~-------------~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
++.+.|.++|+.+..... + .....+|+++ ++.+|++|||+++++|+++
T Consensus 322 ~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~-~~~~t~edi~~~~~~l~~~ 389 (391)
T 3dr4_A 322 QVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPT-HAGLTEADIDRVIAALDQV 389 (391)
T ss_dssp HHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECC-CTTCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccC-CCCCCHHHHHHHHHHHHHH
Confidence 677777788874332210 0 0145799987 5788999999999999865
No 103
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.90 E-value=4.3e-23 Score=204.94 Aligned_cols=287 Identities=15% Similarity=0.095 Sum_probs=201.2
Q ss_pred HHHHHHHHHHcCC-CCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCC
Q 038818 116 NIVMDWLGEMLKL-PKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGI 194 (486)
Q Consensus 116 ~~~~~~l~~l~g~-~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~ 194 (486)
.++++++++++|. +.+ ..++|+|||+++..++.+... +++.|+++..+|.++..+++..|.
T Consensus 70 ~~l~~~la~~~g~~~~~-------~i~~~~g~t~a~~~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~g~ 131 (367)
T 3euc_A 70 EALRAKLKEVMQVPAGM-------EVLLGNGSDEIISMLALAAAR-----------PGAKVMAPVPGFVMYAMSAQFAGL 131 (367)
T ss_dssp HHHHHHHHHHHTCCTTC-------EEEEEEHHHHHHHHHHHHTCC-----------TTCEEEEEESCSCCSCHHHHTTTC
T ss_pred HHHHHHHHHHhCCCCcc-------eEEEcCCHHHHHHHHHHHHcC-----------CCCEEEEcCCCHHHHHHHHHHcCC
Confidence 3456778888898 433 789999999999877776532 566788888999999899999999
Q ss_pred CCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc---CCchHHHHHHHHh--CceEEeeccc
Q 038818 195 DPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV---DPLGPLCDIAKRY--SIWVHVDAAY 269 (486)
Q Consensus 195 g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i---dpl~~I~~i~~~~--g~~lhvD~a~ 269 (486)
+++.+|+++ ++.+|+++|++++++.. +.+|+++.++|++|.+ +++++|+++|++| |+++++|++|
T Consensus 132 ---~~~~v~~~~--~~~~d~~~l~~~l~~~~-----~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~ 201 (367)
T 3euc_A 132 ---EFVGVPLRA--DFTLDRGAMLAAMAEHQ-----PAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAY 201 (367)
T ss_dssp ---EEEEEECCT--TSCCCHHHHHHHHHHHC-----CSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTT
T ss_pred ---eEEEecCCC--CCCCCHHHHHHHhhccC-----CCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcc
Confidence 999999986 67999999999998731 3377788999999999 4578888889999 9999999999
Q ss_pred cchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCC
Q 038818 270 AGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLS 349 (486)
Q Consensus 270 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~s 349 (486)
+.+.. . .....+. ....+.+..++||++..+..+|+++.+ +............ +
T Consensus 202 ~~~~~-~-~~~~~~~-~~~~~i~~~s~sK~~~~G~r~G~~~~~-~~~~~~~~~~~~~-----------------~----- 255 (367)
T 3euc_A 202 QPFAQ-E-SWMSRLT-DFGNLLVMRTVSKLGLAGIRLGYVAGD-PQWLEQLDKVRPP-----------------Y----- 255 (367)
T ss_dssp CCSSS-C-CSGGGGG-TCTTEEEEEECCCTTSCSCCEEEEEEC-HHHHHHHGGGCCS-----------------S-----
T ss_pred hhhcc-c-chHHHHh-hCCCEEEEecchhhcccccCceeeeeC-HHHHHHHHHhCCC-----------------C-----
Confidence 76431 1 1111111 123446778899994455567888774 3333322111100 0
Q ss_pred CCCCchHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHH
Q 038818 350 RRFRALKLWLVLRSFG-VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELN 428 (486)
Q Consensus 350 r~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~ 428 (486)
....+..+++...+. .+++++..++..++++++.+.|+++|++++. ++..+.+.+.+. . .
T Consensus 256 -~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~-~----------------~ 316 (367)
T 3euc_A 256 -NVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVTVF-PSAANFLLARVP-D----------------A 316 (367)
T ss_dssp -CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSTTCEEC-CCSSSEEEEECS-C----------------H
T ss_pred -CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECC-C----------------H
Confidence 012333344444332 4567888899999999999999999999854 555566666553 1 2
Q ss_pred HHHHHHHHhcCcEEEeeeeE--CCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 429 RKLLESINASGQLYVSHGMV--AGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 429 ~~l~~~l~~~g~~~~~~~~~--~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
.++.+.|.++|+.+.....+ .+.+++|+++. +++|+++++++|++++
T Consensus 317 ~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~----~~~~i~~~~~~l~~~l 365 (367)
T 3euc_A 317 AQTFDRLLARKVLIKNVSKMHPLLANCLRVTVS----TPEENAQFLEAFAASL 365 (367)
T ss_dssp HHHHHHHHTTTEECEECGGGCGGGTTEEEEECC----CHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCeEEEECCccCCCCCCEEEEecC----CHHHHHHHHHHHHHHh
Confidence 35667777788754333221 13568999974 7789999999998875
No 104
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.90 E-value=7.8e-23 Score=205.35 Aligned_cols=312 Identities=10% Similarity=0.066 Sum_probs=210.6
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCC-eEEEecCCC
Q 038818 103 FNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISR-LVVYGSDQT 181 (486)
Q Consensus 103 ~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~ 181 (486)
..|...+...++++.+.+|+.+.+|++.+ ....++|+||++|+..++.+... ++ +.|+++..+
T Consensus 70 ~~y~~~~g~~~lr~~la~~l~~~~g~~~~-----~~~i~~~~g~~~al~~~~~~l~~-----------~g~d~vl~~~p~ 133 (398)
T 3ele_A 70 HGYTSAQGDVETRAAIAEFLNNTHGTHFN-----ADNLYMTMGAAASLSICFRALTS-----------DAYDEFITIAPY 133 (398)
T ss_dssp HSCCCTTCCHHHHHHHHHHHHHHHCCCCC-----GGGEEEESSHHHHHHHHHHHHCC-----------STTCEEEEESSC
T ss_pred CCcCCCCCcHHHHHHHHHHHHHHhCCCCC-----hHHEEEccCHHHHHHHHHHHHcC-----------CCCCEEEEeCCC
Confidence 34544455688999999999999986432 13789999999999888777643 55 778889999
Q ss_pred chHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHHH
Q 038818 182 HSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAKR 258 (486)
Q Consensus 182 H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~~ 258 (486)
|.++...++..|. +++.+|++++ ++.+|+++|++++++. +.+|+++.++|++|.+-| +++|+++|++
T Consensus 134 ~~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~ 203 (398)
T 3ele_A 134 FPEYKVFVNAAGA---RLVEVPADTE-HFQIDFDALEERINAH------TRGVIINSPNNPSGTVYSEETIKKLSDLLEK 203 (398)
T ss_dssp CTHHHHHHHHTTC---EEEEECCCTT-TSSCCHHHHHHTCCTT------EEEEEECSSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred chhhHHHHHHcCC---EEEEEecCCc-CCcCCHHHHHHHhCcC------CCEEEEcCCCCCCCCCCCHHHHHHHHHHHHh
Confidence 9999999999999 9999999753 5799999999988643 457888899999999987 7777799999
Q ss_pred ------hCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccC-CCCcceEEEeeCchH----HHHHhcCCccc
Q 038818 259 ------YSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNA----LIKALSTNPEF 327 (486)
Q Consensus 259 ------~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~----~~~~~~~~~~y 327 (486)
||+++++|++|+.+......... .......+.+..+++|+++ .+..+|+++++++.. +...+......
T Consensus 204 ~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~ 282 (398)
T 3ele_A 204 KSKEIGRPIFIIADEPYREIVYDGIKVPF-VTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELYAAVCGAGRA 282 (398)
T ss_dssp HHHHHTSCCEEEEECTTTTCBCTTCCCCC-GGGTCSSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHHHHHHHHHHH
T ss_pred hhhccCCCeEEEEeccccccccCCCCcCC-hHhhcCCeEEEEehhhcCCCccceeEEEEEcchhhhHHHHHHHHHHHhhh
Confidence 99999999999775432111111 1112245577889999998 556789998876521 11111000000
Q ss_pred ccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeE-EEE
Q 038818 328 LRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAV-VCF 406 (486)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~-v~f 406 (486)
. .......+..++....+.... ..++..++++++.+.|+++ ++++..+ ..+. +.+
T Consensus 283 ~-------------------~~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~~ 338 (398)
T 3ele_A 283 L-------------------GYVCAPSLFQKMIVKCQGATG---DINAYKENRDLLYEGLTRI-GYHCFKP-DGAFYMFV 338 (398)
T ss_dssp T-------------------TCCCSCHHHHHHHTTCTTCCC---CHHHHHHHHHHHHHHHHHH-TCCEECC-SBSSEEEE
T ss_pred c-------------------cccCCCHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHc-CCeecCC-CeeEEEEE
Confidence 0 000011222232222221111 3456677788888888876 7777644 4444 555
Q ss_pred EeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 407 RVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
.+... + ..++.+.+.++|+.+..+..+...+++|+++. +++++|+++++.|+++++++.
T Consensus 339 ~~~~~-------------~--~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~e~i~~~l~~l~~~l~~~~ 397 (398)
T 3ele_A 339 KALED-------------D--SNAFCEKAKEEDVLIVAADGFGCPGWVRISYC---VDREMIKHSMPAFEKIYKKYN 397 (398)
T ss_dssp ECSSS-------------C--HHHHHHHHHTTTEECEESGGGTCTTEEEEECC---SCHHHHHHHHHHHHHHHHHHC
T ss_pred EcCCC-------------C--HHHHHHHHHHCCEEEeCccccCCCCeEEEEec---CCHHHHHHHHHHHHHHHHHhh
Confidence 54321 1 24566677778875544443333568999983 588899999999999987753
No 105
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.90 E-value=2e-22 Score=200.01 Aligned_cols=287 Identities=12% Similarity=0.077 Sum_probs=201.9
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDP 196 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~ 196 (486)
++++.+++++|.+.+ ..++|+|||+++..++.+... +++.|+++..+|.++...++..|.
T Consensus 69 ~lr~~la~~~~~~~~-------~v~~~~g~~~a~~~~~~~l~~-----------~gd~vl~~~~~~~~~~~~~~~~g~-- 128 (365)
T 3get_A 69 ELKSTLAQKYKVQNE-------NIIIGAGSDQVIEFAIHSKLN-----------SKNAFLQAGVTFAMYEIYAKQCGA-- 128 (365)
T ss_dssp HHHHHHHHHHTCCGG-------GEEEESSHHHHHHHHHHHHCC-----------TTCEEEECSSCCTHHHHHHHHHTC--
T ss_pred HHHHHHHHHhCCCcc-------eEEECCCHHHHHHHHHHHHhC-----------CCCEEEEeCCChHHHHHHHHHcCC--
Confidence 455677888888655 789999999999877776532 567788999999999999999999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHH--HhCceEEeeccccchhc
Q 038818 197 KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAK--RYSIWVHVDAAYAGSAC 274 (486)
Q Consensus 197 ~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~--~~g~~lhvD~a~g~~~~ 274 (486)
+++.+|++. +++ +|+++|+++++++ +.+|+++.++|++|.+-|++++.++++ ++|+++++|++|+.+.+
T Consensus 129 -~~~~v~~~~-~~~-~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~ 199 (365)
T 3get_A 129 -KCYKTQSIT-HNL-DEFKKLYETHKDE------IKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFAS 199 (365)
T ss_dssp -EEEECSSSS-CCH-HHHHHHHHHTTTT------EEEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHH
T ss_pred -EEEEEecCC-CCC-CCHHHHHHHhCCC------CCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhc
Confidence 999999822 368 9999999998743 457888899999999999999999888 77999999999986542
Q ss_pred --cCcc---chhhhcCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccC
Q 038818 275 --ICPE---FRHFIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITL 348 (486)
Q Consensus 275 --~~~~---~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 348 (486)
.... ...... ....+.+..++||+++ .+..+|+++. +++...........|
T Consensus 200 ~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~--------------------- 256 (365)
T 3get_A 200 FKDSKKHLEPCELIK-EFDNVLYLGTFSKLYGLGGLRIGYGIA-NANIISAFYKLRAPF--------------------- 256 (365)
T ss_dssp HHCGGGCCCHHHHHH-HCTTEEEEEESSSTTSCTTTCCEEEEE-CHHHHHHHHHHSCTT---------------------
T ss_pred ccCCcccccHhHHhc-cCCCEEEEeecchHhcCcchheEEEEc-CHHHHHHHHHhcCCC---------------------
Confidence 1111 111111 1245577889999997 4456888887 444333221111000
Q ss_pred CCCCCchHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHH
Q 038818 349 SRRFRALKLWLVLRSF-GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANEL 427 (486)
Q Consensus 349 sr~~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~ 427 (486)
....+..+++...+ ..+++++..++..++++++.+.|+++ ++++. ++..+.+.+.+... .
T Consensus 257 --~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~~~~~~~~~~~~~~---------------~ 317 (365)
T 3get_A 257 --NVSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKH-NIKII-DSYTNFITYFFDEK---------------N 317 (365)
T ss_dssp --CSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEC-CCSSSEEEEECSSS---------------C
T ss_pred --CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEC-CCCCeEEEEECCCC---------------C
Confidence 01233333333333 23667888899999999999999988 88875 44556666665431 1
Q ss_pred HHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 428 NRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 428 ~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
..++.+.|.++|+.+..+..+. ..++|+++. +++|+++++++|++++
T Consensus 318 ~~~~~~~l~~~gi~v~~g~~~~-~~~iRis~~----~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 318 STDLSEKLLKKGIIIRNLKSYG-LNAIRITIG----TSYENEKFFTEFDKIL 364 (365)
T ss_dssp HHHHHHHHHTTTEECEECGGGT-CSEEEEECC----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCEEEEECccCC-CCEEEEEcC----CHHHHHHHHHHHHHHh
Confidence 3456777777887543333222 678999974 6789999999998865
No 106
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.90 E-value=7e-23 Score=205.93 Aligned_cols=326 Identities=14% Similarity=0.072 Sum_probs=209.4
Q ss_pred HHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccc
Q 038818 88 GFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGR 167 (486)
Q Consensus 88 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 167 (486)
..+.+.+...+..+ .|..++... ++++.+++++|.+ ..+++++||+|+..++.+++..
T Consensus 44 ~~v~~a~~~~~~~~--~y~~~~~~~----~l~~~la~~~~~~---------~~v~~~~Gt~a~~~~l~~~~~~------- 101 (399)
T 2oga_A 44 AETDAAIARVLDSG--RYLLGPELE----GFEAEFAAYCETD---------HAVGVNSGMDALQLALRGLGIG------- 101 (399)
T ss_dssp HHHHHHHHHHHHHT--CCSSSHHHH----HHHHHHHHHTTSS---------EEEEESCHHHHHHHHHHHTTCC-------
T ss_pred HHHHHHHHHHHhcC--CCCCchhHH----HHHHHHHHHHCCC---------eEEEecCHHHHHHHHHHHhCCC-------
Confidence 33444554444322 333344433 4456677888764 3588888999998887765211
Q ss_pred cCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC
Q 038818 168 ENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD 247 (486)
Q Consensus 168 ~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id 247 (486)
++..|+++..+|.++..+++..|+ +++.+|++++ ++.+|+++|+++|++. +.+|+ +++++|.+.
T Consensus 102 ---~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~------~~~v~---~~n~tG~~~ 165 (399)
T 2oga_A 102 ---PGDEVIVPSHTYIASWLAVSATGA---TPVPVEPHED-HPTLDPLLVEKAITPR------TRALL---PVHLYGHPA 165 (399)
T ss_dssp ---TTCEEEEESSSCTHHHHHHHHTTC---EEEEECBCSS-SSSBCHHHHHHHCCTT------EEEEC---CBCGGGCCC
T ss_pred ---CcCEEEECCCccHHHHHHHHHCCC---EEEEEecCCC-CCCcCHHHHHHhcCCC------CeEEE---EeCCcCCcc
Confidence 566788898999999999999999 9999998752 5789999999988642 33444 467899999
Q ss_pred CchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccc--cccCCCCcceEEEeeCchHHHHHhcCCc
Q 038818 248 PLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAH--KWFFTTLDCCCLWVKNPNALIKALSTNP 325 (486)
Q Consensus 248 pl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~h--K~l~~p~~~g~~~~~~~~~~~~~~~~~~ 325 (486)
|+++|.++|+++|+++++|++|+.+.... ... +. ...|.+++++| |+++.|..+|++++++++..........
T Consensus 166 ~l~~i~~l~~~~~~~li~Dea~~~g~~~~--~~~-~~--~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l~~~~~ 240 (399)
T 2oga_A 166 DMDALRELADRHGLHIVEDAAQAHGARYR--GRR-IG--AGSSVAAFSFYPGKNLGCFGDGGAVVTGDPELAERLRMLRN 240 (399)
T ss_dssp CHHHHHHHHHHHTCEECEECTTCTTCEET--TEE-TT--CTTCEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHHB
T ss_pred CHHHHHHHHHHcCCEEEEECcccccCccC--Cee-cc--cccCEEEEeCCCCccCCcCCceEEEEeCCHHHHHHHHHHHh
Confidence 99999999999999999999997654321 111 11 12588899985 9998754567777665654332211000
Q ss_pred ccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCC-eeE-
Q 038818 326 EFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRN-FAV- 403 (486)
Q Consensus 326 ~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~~- 403 (486)
+ ... ..+.........+...+.+++++..+ +.++++.++..++++++.+.|+++|++++...+. .+.
T Consensus 241 -~-g~~-------~~~~~~~~g~~~~~~~~~~a~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~ 309 (399)
T 2oga_A 241 -Y-GSR-------QKYSHETKGTNSRLDEMQAAVLRIRL--AHLDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPV 309 (399)
T ss_dssp -T-TCS-------STTCCCSCCCBCCCCHHHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECC
T ss_pred -c-Ccc-------ccccccccccCCCcCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcce
Confidence 0 000 00100011112234455555555433 4566777888899999999999988887754332 221
Q ss_pred -EEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeee--EC--------C-------------EeEEEEEec
Q 038818 404 -VCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGM--VA--------G-------------IYFIRFAVG 459 (486)
Q Consensus 404 -v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--~~--------~-------------~~~lR~~~~ 459 (486)
+.|.+.... ..++.+.|.++|+.+..... .. + ..++|+++
T Consensus 310 ~~~~~~~~~~---------------~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~- 373 (399)
T 2oga_A 310 WHLFTVRTER---------------RDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPI- 373 (399)
T ss_dssp CSSEEEECSS---------------HHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECC-
T ss_pred eEEEEEECCC---------------HHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccC-
Confidence 124333211 23567777777874322110 00 0 25799998
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 460 ATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 460 ~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
++.++++|+++++++|+++++++.
T Consensus 374 ~~~~t~edi~~~~~~l~~~~~~l~ 397 (399)
T 2oga_A 374 GPHLERPQALRVIDAVREWAERVD 397 (399)
T ss_dssp STTCCHHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhc
Confidence 568889999999999999887653
No 107
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.90 E-value=4e-23 Score=207.63 Aligned_cols=341 Identities=13% Similarity=-0.002 Sum_probs=211.0
Q ss_pred cceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEE-cCCchHHHHHHH
Q 038818 76 YFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVI-QGTTCEAILCTL 154 (486)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~-t~ggt~a~~~al 154 (486)
.+.+.+++...+..+.+.+....+........+|...++..++++++++++|++... .+++ |+|||+|+..++
T Consensus 41 ~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~------~i~~~t~g~t~al~~~~ 114 (398)
T 2fyf_A 41 DGRFGSGPSKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGY------EVILGNGGATAFWDAAA 114 (398)
T ss_dssp SCBCCSSSCCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTC------EEEEEETCHHHHHHHHH
T ss_pred CccccCCCCCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEeCCchhHHHHHHH
Confidence 334445554444444444443221211111235666677788999999999997421 5777 999999998877
Q ss_pred HHHHHHHHHHccccCCCCeEEEecCCCchH-HHHHHHHc--CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCcc
Q 038818 155 AAARDQILNEIGRENISRLVVYGSDQTHSA-LQKAAQIA--GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIP 231 (486)
Q Consensus 155 ~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-~~~a~~~~--G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p 231 (486)
.+... ++ +++++...|.. ....+... |. +++.||++. + ...+. + ++ ..+
T Consensus 115 ~~l~~-----------~g-v~~v~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~-g-~~~~~-~----i~------~~~ 166 (398)
T 2fyf_A 115 FGLID-----------KR-SLHLTYGEFSAKFASAVSKNPFVG---EPIIITSDP-G-SAPEP-Q----TD------PSV 166 (398)
T ss_dssp HHTCS-----------SC-EEEEECSHHHHHHHHHHHHCTTSC---CCEEEECCT-T-CCCCC-C----CC------TTC
T ss_pred HHhcC-----------CC-eEEEeCCHHHHHHHHHHHHhCCCC---ceEEEecCC-C-CCCCc-c----cc------CCC
Confidence 76532 34 33345445532 23345666 66 888999873 2 23332 1 22 124
Q ss_pred EEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEe
Q 038818 232 LFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWV 311 (486)
Q Consensus 232 ~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~ 311 (486)
.+|++++++|++|.+.|+++|.++ +|+++|+|+||+.+....+ +..+|+++.++||+++.|.++|++++
T Consensus 167 ~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~--------~~~~di~~~s~sK~~~~~gg~g~l~~ 235 (398)
T 2fyf_A 167 DVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVD--------IAETDAYYFAPQKNFASDGGLWLAIM 235 (398)
T ss_dssp SEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCC--------GGGCSEEEECTTSTTCSCSSEEEEEE
T ss_pred CEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcccC--------cccCcEEEEecCcccCCCCceEEEEE
Confidence 578888999999999999999988 8999999999976543221 12489999999999998867888887
Q ss_pred eCchHHHHHhc------CCcccccCccCCCCCccCCCCccccCCCC-CCchHHHHHHHHhchHH-HHHHHHHHHHHHHHH
Q 038818 312 KNPNALIKALS------TNPEFLRNKASDSKQVVDYKDWQITLSRR-FRALKLWLVLRSFGVAN-LRNFLRSHVRMAQLF 383 (486)
Q Consensus 312 ~~~~~~~~~~~------~~~~y~~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~g-~~~~~~~~~~~a~~l 383 (486)
+++ .+..... ..++|+...... .... ..... .+.. ....++..+++.+...| ++++.++..++++++
T Consensus 236 ~~~-~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~-~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l 310 (398)
T 2fyf_A 236 SPA-ALSRIEAIAATGRWVPDFLSLPIAV--ENSL-KNQTY-NTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRL 310 (398)
T ss_dssp CHH-HHHHHHHHHHTTCCCCGGGCHHHHH--HHHT-TTCCS-SCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHH
T ss_pred CHH-HHHHhhcccccCCCCCcEEehHHHh--hhcc-cCCCC-CCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 654 2222111 012232211000 0000 00000 1111 11234455565555555 888999999999999
Q ss_pred HHHHhCCCCeEEec-CC--Cee-EEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEec
Q 038818 384 QELVGGDNRFEIVA-PR--NFA-VVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVG 459 (486)
Q Consensus 384 ~~~L~~~~~~~~~~-~~--~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~ 459 (486)
.+.|+++|++++.. ++ ..+ +++|++.... + ..++.+.|.++|+.+..+....+..++|+++.
T Consensus 311 ~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~------------~--~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~ 376 (398)
T 2fyf_A 311 YSWAQERPYTTPFVTDPGLRSQVVGTIDFVDDV------------D--AGTVAKILRANGIVDTEPYRKLGRNQLRVAMF 376 (398)
T ss_dssp HHHHHHSTTEEESCCSGGGBCSSEEEEEECTTS------------C--HHHHHHHHHHTTCBCCSCCTTTCSSEEEEECC
T ss_pred HHHHHHcCCceeccCChhhcCCcEEEEECCCCC------------C--HHHHHHHHHHCCcEEecCcccCCCCEEEEEec
Confidence 99999988999874 23 355 7788774210 1 34567777777875432211123468999995
Q ss_pred CCCCcHHHHHHHHHHHHHHHHH
Q 038818 460 ATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 460 ~~~tt~~did~~i~~l~~~~~~ 481 (486)
..++++|++++++.|++++++
T Consensus 377 -~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 377 -PAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp -TTSCHHHHHHHHHHHHHHHHT
T ss_pred -CCCCHHHHHHHHHHHHHHHHh
Confidence 477888999999999998765
No 108
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.90 E-value=2.5e-22 Score=200.62 Aligned_cols=292 Identities=13% Similarity=0.048 Sum_probs=198.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHc
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIA 192 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 192 (486)
....++++.+++++|.+ ..+++++||+++..++.+... ++..|+++...|.++..+++..
T Consensus 84 ~~~~~l~~~la~~~g~~---------~~i~~~sGt~a~~~~~~~~~~-----------~gd~v~~~~~~~~~~~~~~~~~ 143 (384)
T 1bs0_A 84 VVHQALEEELAEWLGYS---------RALLFISGFAANQAVIAAMMA-----------KEDRIAADRLSHASLLEAASLS 143 (384)
T ss_dssp HHHHHHHHHHHHHHTCS---------EEEEESCHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhCCC---------cEEEeCCcHHHHHHHHHHhCC-----------CCcEEEEcccccHHHHHHHHHc
Confidence 44556778888888875 246666679999887765432 5678888999999999999999
Q ss_pred CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccch
Q 038818 193 GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGS 272 (486)
Q Consensus 193 G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~ 272 (486)
|. +++.+|. +|+++|++++++.. ..+.+|+++.++|++|.+.|+++|.++|++||+++++|++|+.+
T Consensus 144 g~---~~~~~~~-------~d~~~l~~~l~~~~---~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~ 210 (384)
T 1bs0_A 144 PS---QLRRFAH-------NDVTHLARLLASPC---PGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTG 210 (384)
T ss_dssp SS---EEEEECT-------TCHHHHHHHHHSCC---SSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTT
T ss_pred CC---CEEEeCC-------CCHHHHHHHHHhcC---CCCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccc
Confidence 98 8888873 48999999887531 12457888889999999999999999999999999999999754
Q ss_pred hcc-C-ccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCC
Q 038818 273 ACI-C-PEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSR 350 (486)
Q Consensus 273 ~~~-~-~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr 350 (486)
... . ......+ + ...|.++.++||+++ |.| |+++++ ++...........|.. +.
T Consensus 211 ~~~~~~~~~~~~~-~-~~~di~~~s~sK~~~-~~G-G~~~~~-~~~~~~l~~~~~~~~~-------------------~~ 266 (384)
T 1bs0_A 211 VIGEQGRGSCWLQ-K-VKPELLVVTFGKGFG-VSG-AAVLCS-STVADYLLQFARHLIY-------------------ST 266 (384)
T ss_dssp TSSGGGCCHHHHT-T-CCCSEEEEESSSTTS-SCC-EEEEEC-HHHHHHHHHHCHHHHS-------------------SB
T ss_pred eecCCCCchHHhc-C-CCCcEEEeeccchhh-ccC-cEEEeC-HHHHHHHHHhchhhhc-------------------CC
Confidence 321 0 0111111 1 257899999999998 545 877775 4333322111111211 00
Q ss_pred CCCchHH---HHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHH
Q 038818 351 RFRALKL---WLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANEL 427 (486)
Q Consensus 351 ~~~~l~~---~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~ 427 (486)
....+.+ ..+++.+...+.++..++..++++++.+.|+++ ++++. ++..+++.+.+.. ...
T Consensus 267 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~--------------~~~ 330 (384)
T 1bs0_A 267 SMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFTLA-DSCSAIQPLIVGD--------------NSR 330 (384)
T ss_dssp CCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCEEC-SCCSSBCCEEEES--------------HHH
T ss_pred CCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc-CCccc-CCCCCEEEEEeCC--------------HHH
Confidence 1122222 334443321155678888999999999999988 78875 3455666666642 223
Q ss_pred HHHHHHHHHhcCcEEEeeeeE---CCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 428 NRKLLESINASGQLYVSHGMV---AGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 428 ~~~l~~~l~~~g~~~~~~~~~---~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
..++.+.|.++|+.+...... .+..++|+++. ..+++++++++++.|+++
T Consensus 331 ~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~Ri~~~-~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 331 ALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLT-AAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp HHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCC-TTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCcEEEeecCCCCCCCCceEEEEEc-CCCCHHHHHHHHHHHHhh
Confidence 456777787788743322211 23578999985 566888999999999875
No 109
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.90 E-value=2.6e-22 Score=199.88 Aligned_cols=322 Identities=10% Similarity=0.028 Sum_probs=214.3
Q ss_pred HHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcccc
Q 038818 89 FLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRE 168 (486)
Q Consensus 89 ~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~ 168 (486)
.+.+.+...+......|.. .. .++++.+.+++.+.+|.+... ...++|+|||+|+..++.+...
T Consensus 40 ~v~~a~~~~~~~~~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~-----~~i~~t~g~~~a~~~~~~~~~~--------- 103 (377)
T 3fdb_A 40 AVLQAITDAVQREAFGYQP-DG-SLLSQATAEFYADRYGYQARP-----EWIFPIPDVVRGLYIAIDHFTP--------- 103 (377)
T ss_dssp HHHHHHHHHHHTTCCSSCC-SS-CCHHHHHHHHHHHHHCCCCCG-----GGEEEESCHHHHHHHHHHHHSC---------
T ss_pred HHHHHHHHHHHcCCCCCCC-CC-HHHHHHHHHHHHHHhCCCCCH-----HHEEEeCChHHHHHHHHHHhcC---------
Confidence 3444554444333334443 33 678888999999888865321 3789999999999887776543
Q ss_pred CCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC
Q 038818 169 NISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP 248 (486)
Q Consensus 169 ~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp 248 (486)
++..|+++..+|.++..+++..|. +++.+|+++ + +|+++|++++++. +.+|+++.++|++|.+-|
T Consensus 104 --~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~--~--~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~ 168 (377)
T 3fdb_A 104 --AQSKVIVPTPAYPPFFHLLSATQR---EGIFIDATG--G--INLHDVEKGFQAG------ARSILLCNPYNPLGMVFA 168 (377)
T ss_dssp --TTCCEEEEESCCTHHHHHHHHHTC---CEEEEECTT--S--CCHHHHHHHHHTT------CCEEEEESSBTTTTBCCC
T ss_pred --CCCEEEEcCCCcHhHHHHHHHcCC---EEEEccCCC--C--CCHHHHHHHhccC------CCEEEEeCCCCCCCCCCC
Confidence 456677888999999999999999 999999985 2 9999999999764 237888889999999865
Q ss_pred ---chHHHHHHHHhCceEEeeccccchhccC-ccchhhhcCC--CCCCceeeccccccC-CCCcceEEEeeCchHHHHHh
Q 038818 249 ---LGPLCDIAKRYSIWVHVDAAYAGSACIC-PEFRHFIDGI--EGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKAL 321 (486)
Q Consensus 249 ---l~~I~~i~~~~g~~lhvD~a~g~~~~~~-~~~~~~~~~~--~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~ 321 (486)
+++|+++|++||+++++|++|+.+.... ..... +..+ ...+.+..+++|+++ ....+|++++.++.......
T Consensus 169 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~-~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~ 247 (377)
T 3fdb_A 169 PEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAA-GVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQ 247 (377)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGG-GSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCccc-HHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHH
Confidence 6777778999999999999998754322 11111 1111 123366778999996 44567877776665543221
Q ss_pred cCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEecC
Q 038818 322 STNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGG-DNRFEIVAP 398 (486)
Q Consensus 322 ~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~ 398 (486)
... .+.. .....+..+++...+ +.+.++++.++..++++++.+.|++ +|++++..+
T Consensus 248 ~~~-~~~~--------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 306 (377)
T 3fdb_A 248 QLS-PVIK--------------------DGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPM 306 (377)
T ss_dssp HSC-HHHH--------------------CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCC
T ss_pred HHH-Hhhc--------------------CCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecC
Confidence 111 1100 011233333333332 3566788889999999999999988 789988744
Q ss_pred CCeeEE-EEEeecCCCCCCCCCCccchHHHHHHHHHHHHhc-CcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHH
Q 038818 399 RNFAVV-CFRVLPSASGLGDGKANEGANELNRKLLESINAS-GQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKV 474 (486)
Q Consensus 399 ~~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~ 474 (486)
..+.+ .+.+..... ..++.+.+.++ |+.+..+..+. +..++|++++ +++++|+++++.
T Consensus 307 -~~~~~~~~~~~~~~~--------------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~---~~~e~i~~~l~~ 368 (377)
T 3fdb_A 307 -QATYLMWIDFRDTTI--------------EGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFA---TSREVLEEAIDR 368 (377)
T ss_dssp -SBCSEEEEECTTSCC--------------CSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC---SCHHHHHHHHHH
T ss_pred -CeeEEEEEECcccCC--------------CHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeC---CCHHHHHHHHHH
Confidence 44444 455543210 01234445444 77543332222 3578999985 378899999999
Q ss_pred HHHHHHH
Q 038818 475 VQEKLDG 481 (486)
Q Consensus 475 l~~~~~~ 481 (486)
|++++++
T Consensus 369 l~~~l~~ 375 (377)
T 3fdb_A 369 MAKAVSH 375 (377)
T ss_dssp HHHHHTT
T ss_pred HHHHHhh
Confidence 9988764
No 110
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.90 E-value=4.2e-22 Score=201.09 Aligned_cols=301 Identities=11% Similarity=0.091 Sum_probs=196.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH-
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ- 190 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~- 190 (486)
.....++++++++++|.+ .+++|+|||+|+..++.++.. +++.|+++...|.+....+.
T Consensus 55 ~~~~~~l~~~la~~~g~~---------~~~~~~~gt~a~~~al~~l~~-----------~gd~vi~~~~~~~~~~~~~~~ 114 (412)
T 2cb1_A 55 DPTAKALEERLKALEGAL---------EAVVLASGQAATFAALLALLR-----------PGDEVVAAKGLFGQTIGLFGQ 114 (412)
T ss_dssp CHHHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHTTCC-----------TTCEEEEETTCCHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchhHHHHHHH
Confidence 344556778889998864 478999999999888876532 56678889899988766543
Q ss_pred ---HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeec
Q 038818 191 ---IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDA 267 (486)
Q Consensus 191 ---~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~ 267 (486)
..|+ +++.+|. |+++|+++|+++ +.+|+++.++|++|.+.|+++|+++|++||+++|+|+
T Consensus 115 ~~~~~g~---~~~~~~~--------~~~~l~~~i~~~------~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~ 177 (412)
T 2cb1_A 115 VLSLMGV---TVRYVDP--------EPEAVREALSAK------TRAVFVETVANPALLVPDLEALATLAEEAGVALVVDN 177 (412)
T ss_dssp TTTTTTC---EEEEECS--------SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHcCC---EEEEECC--------CHHHHHHHhccC------CeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEEC
Confidence 3566 7888764 388898888653 4578889999999999999999999999999999999
Q ss_pred cccch-hccCccchhhhcCCCCCCceeeccccccCCCCc-ceEEEeeCchH-HHHHhcCCcccccCcc----CCCCCc-c
Q 038818 268 AYAGS-ACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD-CCCLWVKNPNA-LIKALSTNPEFLRNKA----SDSKQV-V 339 (486)
Q Consensus 268 a~g~~-~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~~~~~~-~~~~~~~~~~y~~~~~----~~~~~~-~ 339 (486)
+|+.+ ....+ .. .++|.++.++||++++|.+ .|.+++.++.. +.+.....++...... ...... .
T Consensus 178 ~~~~~~~~~~~-~~------~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 250 (412)
T 2cb1_A 178 TFGAAGALCRP-LA------WGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPE 250 (412)
T ss_dssp GGGTTTTSCCG-GG------GTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHH
T ss_pred CCccccccCCc-cc------cCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHH
Confidence 99876 32221 11 2689999999999998876 77777665321 0000000010000000 000000 0
Q ss_pred CCCCcc-ccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC-----------------Ce
Q 038818 340 DYKDWQ-ITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR-----------------NF 401 (486)
Q Consensus 340 ~~~~~~-~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------------~~ 401 (486)
.....+ ...+....+...|..+.. .+.+.+.+++..++++++.+.|.+.++++++..| ..
T Consensus 251 ~~r~~~~~~~g~~~~~~~a~~~~~~--l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~ 328 (412)
T 2cb1_A 251 RVRTLGLSLCGMALSPFNAYLLFQG--LETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGG 328 (412)
T ss_dssp HHHHHHTTTTCCCCCHHHHHHHHHH--GGGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSC
T ss_pred HHHHHHHHhcCCCCChHHhHHHHcC--CchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCc
Confidence 000000 001112344555555543 3566777888889999999999999898855222 35
Q ss_pred eEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeee--------eEC----------------C--EeEEE
Q 038818 402 AVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHG--------MVA----------------G--IYFIR 455 (486)
Q Consensus 402 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--------~~~----------------~--~~~lR 455 (486)
++++|.+ +. . +.+.+.+.+.|+.. ... ... | .+.+|
T Consensus 329 ~iv~~~~-~~-------------~---~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR 390 (412)
T 2cb1_A 329 PILTLDL-GD-------------L---ERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVR 390 (412)
T ss_dssp SEEEEEC-SS-------------H---HHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEE
T ss_pred eEEEEEe-CC-------------H---HHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEE
Confidence 6889988 42 2 23344444557644 321 000 1 46899
Q ss_pred EEecCCCCcHHHHHHHHHHHHH
Q 038818 456 FAVGATLTEDRHVIAAWKVVQE 477 (486)
Q Consensus 456 ~~~~~~~tt~~did~~i~~l~~ 477 (486)
+|++ ..+++++|+.++++|++
T Consensus 391 ~s~g-~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 391 VSVG-LEDPLDLLALFEEALEA 411 (412)
T ss_dssp EECC-SSCHHHHHHHHHHHHHC
T ss_pred EEec-cCCHHHHHHHHHHHHhh
Confidence 9995 67788899999999874
No 111
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.90 E-value=8e-22 Score=198.24 Aligned_cols=301 Identities=13% Similarity=0.094 Sum_probs=200.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHc
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIA 192 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 192 (486)
....++++.+++++|.+. ..++++ |+++|..++.+..... +++.|+++..+|.++..+++..
T Consensus 91 ~~~~~l~~~la~~~~~~~--------~i~~~s-G~~a~~~~~~~l~~~~---------~gd~Vl~~~~~~~~~~~~~~~~ 152 (401)
T 2bwn_A 91 AYHRRLEAEIAGLHQKEA--------ALVFSS-AYNANDATLSTLRVLF---------PGLIIYSDSLNHASMIEGIKRN 152 (401)
T ss_dssp HHHHHHHHHHHHHTTCSE--------EEEESC-HHHHHHHHHHHHHHHS---------TTCEEEEETTCCHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCCCc--------EEEECC-cHHHHHHHHHHHhcCC---------CCCEEEECchhhHHHHHHHHHc
Confidence 344556777888888642 455555 4558877766543210 5668888999999999999999
Q ss_pred CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccch
Q 038818 193 GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGS 272 (486)
Q Consensus 193 G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~ 272 (486)
|+ +++.+|.+ |+++|+++++.... ..+.+|++++++|++|.+.|+++|+++|++||+++++|++|+.+
T Consensus 153 g~---~~~~v~~~-------d~~~le~~l~~~~~--~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g 220 (401)
T 2bwn_A 153 AG---PKRIFRHN-------DVAHLRELIAADDP--AAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVG 220 (401)
T ss_dssp CC---CEEEECTT-------CHHHHHHHHHHSCT--TSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred CC---eEEEEcCC-------CHHHHHHHHHhhcc--CCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEecccccc
Confidence 99 99999863 78999998874211 13568999999999999999999999999999999999999844
Q ss_pred hccCccchhh--hcCC-CCCCceeeccccccCCCCcceEEEeeCchHHHHHhcC-CcccccCccCCCCCccCCCCccccC
Q 038818 273 ACICPEFRHF--IDGI-EGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALST-NPEFLRNKASDSKQVVDYKDWQITL 348 (486)
Q Consensus 273 ~~~~~~~~~~--~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~~~ 348 (486)
.+ .+..... ..++ +..|.+..+++|+++.|. |+++.+ +.... .+.. ..++.... .
T Consensus 221 ~~-~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G--G~~~~~-~~~~~-~l~~~~~~~~~~~----------------~ 279 (401)
T 2bwn_A 221 MY-GPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG--GYIAAS-ARMVD-AVRSYAPGFIFST----------------S 279 (401)
T ss_dssp TS-STTSCCHHHHHTCGGGCSEEEEESSSTTCSCC--EEEEEC-HHHHH-HHHHHCHHHHTSB----------------C
T ss_pred cc-CCCCceeeeccCccccCcEEEeechhhccCCC--CEEecC-HHHHH-HHHHhCcCceecC----------------C
Confidence 32 1111111 1122 346788889999998753 666654 33322 2211 11111100 0
Q ss_pred CCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHH
Q 038818 349 SRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELN 428 (486)
Q Consensus 349 sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~ 428 (486)
+......++..+++.+...++.++.++..++++++.+.|+++ ++++.. +..++++|.+.. +...
T Consensus 280 ~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~--------------~~~~ 343 (401)
T 2bwn_A 280 LPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMPIID-HGSHIVPVVIGD--------------PVHT 343 (401)
T ss_dssp CCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCC-CSSSCEEEECCC--------------HHHH
T ss_pred CCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCcccC-CCCCeEEEEeCC--------------hHHH
Confidence 001122344556666655567888999999999999999887 777663 455677776642 2224
Q ss_pred HHHHHHHH-hcCcEEEeeeeE----CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 429 RKLLESIN-ASGQLYVSHGMV----AGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 429 ~~l~~~l~-~~g~~~~~~~~~----~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
.++.+.|. +.|+.+ .+... .+..++|+++. ..++++||++++++|+++++++
T Consensus 344 ~~~~~~L~~~~gi~v-~~~~~~~~~~~~~~iRis~~-~~~t~~~i~~~~~~l~~~~~~~ 400 (401)
T 2bwn_A 344 KAVSDMLLSDYGVYV-QPINFPTVPRGTERLRFTPS-PVHDLKQIDGLVHAMDLLWARC 400 (401)
T ss_dssp HHHHHHHHHHHCEEC-CEECTTTSCTTCCEEEECCC-TTSCHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHhcCCEEE-eecCCCCCCCCCceEEEEee-CCCCHHHHHHHHHHHHHHHHhc
Confidence 46777775 668743 33221 13468999985 5678889999999999887653
No 112
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.89 E-value=4.1e-22 Score=201.28 Aligned_cols=310 Identities=11% Similarity=0.040 Sum_probs=193.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ 186 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 186 (486)
..+...++|+.+++++++++|.+.. ..++ ++||+|+..++.+... +++.|+++..+|.++.
T Consensus 65 ~~~~~~~~~~~~~~~la~~~g~~~~-------~i~~-~sGt~a~~~~~~~~~~-----------~gd~vl~~~~~~~~~~ 125 (417)
T 3n0l_A 65 GCEFVDEIETLAIERCKKLFNCKFA-------NVQP-NSGSQANQGVYAALIN-----------PGDKILGMDLSHGGHL 125 (417)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEE-------ECCC-SSHHHHHHHHHHHHSC-----------TTCEEEEECC------
T ss_pred cchHHHHHHHHHHHHHHHHhCCCCc-------ceEe-ccHHHHHHHHHHHhcC-----------CCCEEEeccccccccc
Confidence 3455678998899999999998653 3444 5558999888777643 6677888888887765
Q ss_pred H---HHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceE
Q 038818 187 K---AAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWV 263 (486)
Q Consensus 187 ~---a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~l 263 (486)
. .+...|.+. .++.++++ +++.+|+++|++++++.. +.+|+++.++ .|.+.|+++|.++|++||+++
T Consensus 126 ~~~~~~~~~g~~~-~~~~~~~~--~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~--~G~~~~l~~i~~l~~~~~~~l 195 (417)
T 3n0l_A 126 THGAKVSSSGKMY-ESCFYGVE--LDGRIDYEKVREIAKKEK-----PKLIVCGASA--YARVIDFAKFREIADEIGAYL 195 (417)
T ss_dssp ----------CCS-EEEEECCC--TTSSCCHHHHHHHHHHHC-----CSEEEECCSS--CCSCCCHHHHHHHHHHHTCEE
T ss_pred chhhhhhhhccee-eeEeccCC--CCCCcCHHHHHHHHHhcC-----CeEEEECCcc--cCccCCHHHHHHHHHHcCCEE
Confidence 4 334445411 34455555 467899999999998431 3366666655 399999999999999999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCC
Q 038818 264 HVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKD 343 (486)
Q Consensus 264 hvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 343 (486)
++|++|+.+......... .+..+|.++.++||++.+|. +|+++.+++..............
T Consensus 196 i~Dea~~~g~~~~~~~~~---~~~~~di~~~s~sK~l~g~~-~G~~~~~~~~~~~~~~~~~~~~~--------------- 256 (417)
T 3n0l_A 196 FADIAHIAGLVVAGEHPS---PFPYAHVVSSTTHKTLRGPR-GGIIMTNDEELAKKINSAIFPGI--------------- 256 (417)
T ss_dssp EEECTTTHHHHHTTSSCC---CTTTCSEEEEESSTTTCSCS-CEEEEESCHHHHHHHHHHHTTTT---------------
T ss_pred EEECccchhhhhcccCCC---ccccceEEEeeCccccCCCC-eeEEEECCHHHHHHHhhhhCCcc---------------
Confidence 999998655443322111 12357999999999997776 48887775544332211000000
Q ss_pred ccccCCCC-CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC-CCeeEEEEEeecCCCCCCCCCCc
Q 038818 344 WQITLSRR-FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP-RNFAVVCFRVLPSASGLGDGKAN 421 (486)
Q Consensus 344 ~~~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~ 421 (486)
.++.. ....++..++.....+++.++.++..++++++.+.|.+ .++++..+ ...+.+.+.+.+...
T Consensus 257 ---~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~~-------- 324 (417)
T 3n0l_A 257 ---QGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMD-RKFKLVSDGTDNHLVLMSFLDREF-------- 324 (417)
T ss_dssp ---CSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH-TTCEEGGGSCSSSEEEEECTTSSS--------
T ss_pred ---cCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCceEEEEEcccCCC--------
Confidence 00101 11123344455444567888999999999999999988 58887652 334555555543210
Q ss_pred cchHHHHHHHHHHHHhcCcEEEeeee------ECCEeEEEEEecC---CCCcHHHHHHHHHHHHHHHHH
Q 038818 422 EGANELNRKLLESINASGQLYVSHGM------VAGIYFIRFAVGA---TLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 422 ~~~~~~~~~l~~~l~~~g~~~~~~~~------~~~~~~lR~~~~~---~~tt~~did~~i~~l~~~~~~ 481 (486)
....+.+.+.+.|+.+..... ......+|+++.. ...++++|+++++.|++++++
T Consensus 325 -----~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 388 (417)
T 3n0l_A 325 -----SGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDD 388 (417)
T ss_dssp -----CHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred -----CHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 123455566667874322111 1123569998732 235688999999999988754
No 113
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.89 E-value=6.9e-22 Score=196.93 Aligned_cols=323 Identities=12% Similarity=0.077 Sum_probs=212.9
Q ss_pred HHHHHHHhhcCCC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccc
Q 038818 89 FLGEMLSSGFNVV-GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGR 167 (486)
Q Consensus 89 ~~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 167 (486)
.+.+.+...+... ...|...+...++++.+.+++.+.+|.+.+. ....++|+||++++..++.+...
T Consensus 42 ~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~----~~~v~~~~g~~~a~~~~~~~l~~-------- 109 (376)
T 2dou_A 42 APLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDP----RREALALIGSQEGLAHLLLALTE-------- 109 (376)
T ss_dssp HHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCT----TTSEEEESSHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CccEEEcCCcHHHHHHHHHHhcC--------
Confidence 3555665555332 2334333456788888888888888986210 01689999999999877776532
Q ss_pred cCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC
Q 038818 168 ENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD 247 (486)
Q Consensus 168 ~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id 247 (486)
+++.|+++..+|.++..+++..|. +++.+|++ +.+.+|+++|++++++. +.+|+++.++|++|.+-
T Consensus 110 ---~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~--~~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~~ 175 (376)
T 2dou_A 110 ---PEDLLLLPEVAYPSYFGAARVASL---RTFLIPLR--EDGLADLKAVPEGVWRE------AKVLLLNYPNNPTGAVA 175 (376)
T ss_dssp ---TTCEEEEESSCCHHHHHHHHHTTC---EEEEECBC--TTSSBCGGGSCHHHHHH------EEEEEECSSCTTTCCCC
T ss_pred ---CCCEEEECCCCcHhHHHHHHHcCC---EEEEeeCC--CCCCCCHHHHHHhhccC------ceEEEECCCCCCcCccC
Confidence 566788888999999999999999 99999983 34679999999999754 34777788999999986
Q ss_pred C---chHHHHHHHHhCceEEeeccccchhccCccchhhhc--CCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHh
Q 038818 248 P---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFID--GIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKAL 321 (486)
Q Consensus 248 p---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~--~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~ 321 (486)
| +++|+++|++||+++++|++|+.+.... .....+. +....+.+..+++|+++.| ..+|+++.+ ++......
T Consensus 176 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~l~ 253 (376)
T 2dou_A 176 DWGYFEEALGLARKHGLWLIHDNPYVDQVYEG-EAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGS-EEALARLE 253 (376)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTGGGBSSS-CCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEEC-HHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecC-HHHHHHHH
Confidence 6 6889999999999999999998754321 1111111 1123557778999999743 457887764 33332211
Q ss_pred cCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC
Q 038818 322 STNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR 399 (486)
Q Consensus 322 ~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 399 (486)
.....+. . ....+...++...+ +.+.+++..++..++++++.+.|+++ +++..+.
T Consensus 254 ~~~~~~~-------------------~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~ 310 (376)
T 2dou_A 254 RVKGVID-------------------F--NQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV--LSLLPPR 310 (376)
T ss_dssp HHHHHHC-------------------C--CSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT--SEECCCC
T ss_pred HHHHhcc-------------------c--CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh--cCccCCC
Confidence 1000000 0 01223333333333 34667888888899999999999887 7765333
Q ss_pred CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 038818 400 NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQE 477 (486)
Q Consensus 400 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~~ 477 (486)
....+.+.+.... + ..++.+.|.++|+.+..+..+. +..++|+++.. ++++|+++++.|++
T Consensus 311 ~~~~~~~~~~~~~------------~--~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris~~~---~~~~i~~~l~~l~~ 373 (376)
T 2dou_A 311 ATMYLWGRLPEGV------------D--DLEFGLRLVERGVALAPGRGFGPGGKGFVRIALVR---PLEELLEAAKRIRE 373 (376)
T ss_dssp BSSEEEEECCTTC------------C--HHHHHHHHHHTTEECEEGGGGCGGGTTEEEEECCS---CHHHHHHHHHHHHH
T ss_pred eeEEEEEECCCCC------------C--HHHHHHHHHHCCEEEcCchhhCCCCCCeEEEEecC---CHHHHHHHHHHHHH
Confidence 3234555554210 1 2356777777787544332222 25689999852 67899999999887
Q ss_pred HH
Q 038818 478 KL 479 (486)
Q Consensus 478 ~~ 479 (486)
++
T Consensus 374 ~l 375 (376)
T 2dou_A 374 AL 375 (376)
T ss_dssp TC
T ss_pred Hh
Confidence 53
No 114
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.89 E-value=2.1e-22 Score=202.60 Aligned_cols=310 Identities=10% Similarity=0.082 Sum_probs=201.7
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH
Q 038818 107 SSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ 186 (486)
Q Consensus 107 ~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 186 (486)
..+...++|+.+++++++++|.+.. .+++++||+|+..++.++.. +++.|+++..+|.+..
T Consensus 63 ~~~~~~~l~~~~r~~la~~~g~~~~--------~i~~~sGt~a~~~a~~~~~~-----------~gd~Vl~~~~~~~~~~ 123 (405)
T 2vi8_A 63 GCEYVDIVEELARERAKQLFGAEHA--------NVQPHSGAQANMAVYFTVLE-----------HGDTVLGMNLSHGGHL 123 (405)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEE--------ECCCSSHHHHHHHHHHHHCC-----------TTCEEEEECGGGTCCT
T ss_pred cchHHHHHHHHHHHHHHHHhCCCce--------EEEecCcHHHHHHHHHHhcC-----------CCCEEEEecccccchh
Confidence 3456678888899999999998743 34455669999888877632 5667888888887754
Q ss_pred H-H--HHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceE
Q 038818 187 K-A--AQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWV 263 (486)
Q Consensus 187 ~-a--~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~l 263 (486)
. + +...|.+. +++.+++++ .++.+|+++|++++++.. +.+|+++ + +..|...|+++|.++|++||+++
T Consensus 124 ~~~~~~~~~g~~~-~~~~~~~~~-~~~~~d~~~l~~~i~~~~-----~~~v~~~-~-~~~~~~~~l~~i~~l~~~~~~~l 194 (405)
T 2vi8_A 124 THGSPVNFSGVQY-NFVAYGVDP-ETHVIDYDDVREKARLHR-----PKLIVAA-A-AAYPRIIDFAKFREIADEVGAYL 194 (405)
T ss_dssp TTTCTTSHHHHHS-EEEEECBCT-TTCSBCHHHHHHHHHHHC-----CSEEEEC-C-SSCCSCCCHHHHHHHHHHHTCEE
T ss_pred cccchhhhcccee-EEEeccccc-ccCCcCHHHHHHHHHhcC-----CeEEEEe-C-CCCCccCCHHHHHHHHHHcCCEE
Confidence 2 1 12223211 566777653 257899999999997631 2245442 2 34577789999999999999999
Q ss_pred EeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcC-CcccccCccCCCCCccCCC
Q 038818 264 HVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALST-NPEFLRNKASDSKQVVDYK 342 (486)
Q Consensus 264 hvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~ 342 (486)
|+|++|+.+....+... ..+...|.++.++||++++|.| |+++++ ++... .+.. ...+..
T Consensus 195 i~Dea~~~g~~~~~~~~---~~~~~~di~~~s~sK~~~g~~g-G~~~~~-~~~~~-~l~~~~~~~~~------------- 255 (405)
T 2vi8_A 195 MVDMAHIAGLVAAGLHP---NPVPYAHFVTTTTHKTLRGPRG-GMILCQ-EQFAK-QIDKAIFPGIQ------------- 255 (405)
T ss_dssp EEECTTTHHHHHTTSSC---CSTTTCSEEEEESSSTTCCCSC-EEEEEC-HHHHH-HHHHHHTTTTC-------------
T ss_pred EEEccccccccccCcCC---CccccCCEEEEeccccCCCCCC-eEEEEc-HHHHH-HHHhhhccccc-------------
Confidence 99999985433222111 1133689999999999998877 888876 33332 2211 001100
Q ss_pred CccccCCCCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC-CeeEEEEEeecCCCCCCCCCC
Q 038818 343 DWQITLSRRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR-NFAVVCFRVLPSASGLGDGKA 420 (486)
Q Consensus 343 ~~~~~~sr~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~~~v~f~~~~~~~~~~~~~~ 420 (486)
++... ...++..++..+..++++++.++..++++++.+.|+++ ++++..++ ..+++.+.+....
T Consensus 256 -----~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-------- 321 (405)
T 2vi8_A 256 -----GGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GFTLVSGGTDNHLLLVDLRPQQ-------- 321 (405)
T ss_dssp -----SSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGT--------
T ss_pred -----CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCCceEEEEEccCCC--------
Confidence 01011 11222344544444678899999999999999999988 89887543 4567777765311
Q ss_pred ccchHHHHHHHHHHHHhcCcEEEeee------eECCEeEEEEEecC---CCCcHHHHHHHHHHHHHHHHHH
Q 038818 421 NEGANELNRKLLESINASGQLYVSHG------MVAGIYFIRFAVGA---TLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 421 ~~~~~~~~~~l~~~l~~~g~~~~~~~------~~~~~~~lR~~~~~---~~tt~~did~~i~~l~~~~~~l 482 (486)
. ....+.+.|.++|+.+..+. ...+..++|+++.. +..+++|++++++.|+++++++
T Consensus 322 -~----~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~ 387 (405)
T 2vi8_A 322 -L----TGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNV 387 (405)
T ss_dssp -C----CHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCT
T ss_pred -C----CHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhcc
Confidence 0 02345666667787543321 01124579999853 2457899999999999987544
No 115
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.89 E-value=1.2e-22 Score=204.53 Aligned_cols=326 Identities=7% Similarity=-0.012 Sum_probs=215.5
Q ss_pred HHHHHHHhhcCCC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccc
Q 038818 89 FLGEMLSSGFNVV-GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGR 167 (486)
Q Consensus 89 ~~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 167 (486)
.+.+.+...+... ...|...+...++++.+.+|+.+.+|.+.+. ....++|+||++++..++.+...
T Consensus 64 ~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~~~v~~t~G~~~al~~~~~~l~~-------- 131 (404)
T 2o1b_A 64 GIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDK----EDEVCILYGTKNGLVAVPTCVIN-------- 131 (404)
T ss_dssp HHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCT----TTSEEEESSHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----cccEEEcCCcHHHHHHHHHHhcC--------
Confidence 3455555555332 2234443467889999999999988976210 01689999999999887776532
Q ss_pred cCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC
Q 038818 168 ENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD 247 (486)
Q Consensus 168 ~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id 247 (486)
+++.|+++..+|.++..+++..|. +++.+|.++ +.+.+|+++|++++++. +.+|+++.++|++|.+-
T Consensus 132 ---~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~-~~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~~ 198 (404)
T 2o1b_A 132 ---PGDYVLLPDPGYTDYLAGVLLADG---KPVPLNLEP-PHYLPDWSKVDSQIIDK------TKLIYLTYPNNPTGSTA 198 (404)
T ss_dssp ---TTCEEEEEESCCSSHHHHHHHTTC---EEEEEECCT-TTCCCCGGGSCHHHHHH------EEEEEECSSCTTTCCCC
T ss_pred ---CCCEEEEcCCCchhHHHHHHHCCC---EEEEeccCc-ccCcCCHHHHHHhhccC------ceEEEEcCCCCCCCccC
Confidence 556788888999999999999999 999999875 34678999999999754 34677788999999987
Q ss_pred C---chHHHHHHHHhCceEEeeccccchhccCccchhhhcC--CCCCCceeeccccccCCC-CcceEEEeeCchHHHHHh
Q 038818 248 P---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDG--IEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKAL 321 (486)
Q Consensus 248 p---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~--~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~ 321 (486)
| +++|+++|++||+++++|++|+.+.... ........ ....|.++.++||+++.| ..+|+++.+ ++......
T Consensus 199 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~l~ 276 (404)
T 2o1b_A 199 TKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDA-KNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGN-KDMIQALK 276 (404)
T ss_dssp CHHHHHHHHHHHTTSSCEEEEECTTTTCBSSS-CCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEEC-HHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCCEEEEEecchhccCchhheEeEecC-HHHHHHHH
Confidence 5 7899999999999999999998754311 11111111 113467788999999744 457887764 33332211
Q ss_pred cCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC
Q 038818 322 STNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR 399 (486)
Q Consensus 322 ~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 399 (486)
.....+. . ....+..+++...+ +.+.++++.++..++++++.+.|+++ ++++.. +
T Consensus 277 ~~~~~~~-------------------~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~ 333 (404)
T 2o1b_A 277 KYQTHTN-------------------A--GMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKA-DLPFVH-A 333 (404)
T ss_dssp HHHHHHC-------------------C--CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEC-C
T ss_pred HHHhhcc-------------------C--CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCeecC-C
Confidence 1000000 0 11223333333333 35667888888889999999999887 787764 4
Q ss_pred CeeE-EEEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHH
Q 038818 400 NFAV-VCFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVV 475 (486)
Q Consensus 400 ~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l 475 (486)
..++ +.+.+.... + ..++.+.+. +.|+.+..+..+. +..++|+++.. ++++|+++++.|
T Consensus 334 ~~g~~~~~~~~~~~------------~--~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~---~~e~l~~~l~~l 396 (404)
T 2o1b_A 334 KGGIYVWLETPPGY------------D--SEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL---DDQKLDEAAIRL 396 (404)
T ss_dssp CBSSEEEEECCTTC------------C--HHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS---CTTHHHHHHHHH
T ss_pred CcceEEEEeCCCCC------------C--HHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC---CHHHHHHHHHHH
Confidence 4444 455553210 1 234566655 4687544332222 25689999853 566999999999
Q ss_pred HHHHHH
Q 038818 476 QEKLDG 481 (486)
Q Consensus 476 ~~~~~~ 481 (486)
.+++++
T Consensus 397 ~~~l~~ 402 (404)
T 2o1b_A 397 TELAYL 402 (404)
T ss_dssp HGGGGG
T ss_pred HHHHHh
Confidence 887654
No 116
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.89 E-value=1.6e-21 Score=192.94 Aligned_cols=288 Identities=11% Similarity=0.037 Sum_probs=200.8
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCC
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGID 195 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g 195 (486)
.++++++++++|.+.+ ..++|+|||+|+..++.++ +.|+++..+|.++..+++..|.
T Consensus 64 ~~l~~~la~~~~~~~~-------~i~~~~g~t~al~~~~~~~---------------d~vi~~~~~~~~~~~~~~~~g~- 120 (361)
T 3ftb_A 64 RRLNKSIENYLKLKDI-------GIVLGNGASEIIELSISLF---------------EKILIIVPSYAEYEINAKKHGV- 120 (361)
T ss_dssp HHHHHHHHHHHTCCSC-------EEEEESSHHHHHHHHHTTC---------------SEEEEEESCCTHHHHHHHHTTC-
T ss_pred HHHHHHHHHHhCCCcc-------eEEEcCCHHHHHHHHHHHc---------------CcEEEecCChHHHHHHHHHcCC-
Confidence 3455677777887655 6899999999987766544 3477888899999999999999
Q ss_pred CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHHHhCceEEeeccccch
Q 038818 196 PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAKRYSIWVHVDAAYAGS 272 (486)
Q Consensus 196 ~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~~~g~~lhvD~a~g~~ 272 (486)
+++.+|++++ +.+++++|++++++ + .+|+++.++|++|.+-| +++|+++|++||+++++|++|+.+
T Consensus 121 --~~~~~~~~~~--~~~~~~~l~~~l~~-~------~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~ 189 (361)
T 3ftb_A 121 --SVVFSYLDEN--MCIDYEDIISKIDD-V------DSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEF 189 (361)
T ss_dssp --EEEEEECCTT--SCCCHHHHHHHTTT-C------SEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGG
T ss_pred --eEEEeecCcc--cCCCHHHHHHhccC-C------CEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhh
Confidence 9999999863 47888999998875 3 37888999999999976 667888888999999999999765
Q ss_pred hccCccchh-hhcCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCC
Q 038818 273 ACICPEFRH-FIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSR 350 (486)
Q Consensus 273 ~~~~~~~~~-~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr 350 (486)
... ..... ...+......+..+++|+++ ....+|++++.++............+
T Consensus 190 ~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~~~----------------------- 245 (361)
T 3ftb_A 190 TGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPW----------------------- 245 (361)
T ss_dssp TCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSCTT-----------------------
T ss_pred cCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCCCC-----------------------
Confidence 542 11100 01111123355678999997 44567887766665543222111100
Q ss_pred CCCchHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHhCCCCeE-EecCCCeeEEEEEeecCCCCCCCCCCccchHHHH
Q 038818 351 RFRALKLWLVLRSFG-VANLRNFLRSHVRMAQLFQELVGGDNRFE-IVAPRNFAVVCFRVLPSASGLGDGKANEGANELN 428 (486)
Q Consensus 351 ~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~ 428 (486)
....+..+++...+. .+++++..++..++++++.+.|+++|+++ +. ++..+.+.+.+.... .
T Consensus 246 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~---------------~ 309 (361)
T 3ftb_A 246 NINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVF-SPHANFVLCRLENIS---------------G 309 (361)
T ss_dssp CSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEE-CCSSSEEEEEESSSC---------------H
T ss_pred CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCceec-CCCCeEEEEEcCCCC---------------H
Confidence 113344444444442 45678888889999999999999998998 55 555667777765311 2
Q ss_pred HHHHHHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 429 RKLLESINASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 429 ~~l~~~l~~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
.++.+.|.++|+.+..+..+. +.+++|+++. +++++++++++|+++.+.
T Consensus 310 ~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~~~~ 360 (361)
T 3ftb_A 310 EKLYDSLLKEDIVIRRCCNFIGLDDSFVRFAIK----DEKKNTKFLRALKGVENN 360 (361)
T ss_dssp HHHHHHHHTTTEECEECTTSTTCCTTEEEEECC----CHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCeEEeeCccCCCCCCCEEEEEcC----CHHHHHHHHHHHHHHHhc
Confidence 456777877887544333232 3578999974 666899999999988764
No 117
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.89 E-value=3.6e-22 Score=202.09 Aligned_cols=342 Identities=12% Similarity=0.063 Sum_probs=219.4
Q ss_pred HHHHHHHhhcCCC--ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcc
Q 038818 89 FLGEMLSSGFNVV--GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIG 166 (486)
Q Consensus 89 ~~~~~l~~~~n~~--~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 166 (486)
.+.+.+...+... ...|.......++++.+.+++.+.+|.+.+. ....++|+||++++..++.+...
T Consensus 45 ~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~----~~~i~~~~g~~~a~~~~~~~~~~------- 113 (422)
T 3fvs_A 45 FAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDP----LRNVLVTVGGYGALFTAFQALVD------- 113 (422)
T ss_dssp HHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCH----HHHEEEESHHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCC----CCcEEEECChHHHHHHHHHHHcC-------
Confidence 3444444444332 2345444456789999999999999875320 01689999999999888776533
Q ss_pred ccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCC----C------CCcccCHHHHHHHHHHHHHCCCccEEEEe
Q 038818 167 RENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTK----S------SSFTLTPESLQAAIDLDIQAGLIPLFLCA 236 (486)
Q Consensus 167 ~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~----~------~~~~~d~~~L~~~l~~~~~~g~~p~~vv~ 236 (486)
++..|+++..+|.++...++..|. +++.+|+++ + .++.+|+++|++++++. +.+|++
T Consensus 114 ----~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~------~~~v~~ 180 (422)
T 3fvs_A 114 ----EGDEVIIIEPFFDCYEPMTMMAGG---RPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSR------TKALVL 180 (422)
T ss_dssp ----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTT------EEEEEE
T ss_pred ----CCCEEEEcCCCchhhHHHHHHcCC---EEEEEecccccccccccccccCCCCCHHHHHhhcCCC------ceEEEE
Confidence 566788888999999999999999 999999875 1 25689999999988643 457888
Q ss_pred ecCCccccccC---CchHHHHHHHHhCceEEeeccccchhccCccchhh--hcCCCCCCceeeccccccC-CCCcceEEE
Q 038818 237 TVGTTAITTVD---PLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHF--IDGIEGADSFSLNAHKWFF-TTLDCCCLW 310 (486)
Q Consensus 237 ~~gtt~~G~id---pl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~-~p~~~g~~~ 310 (486)
+.++|++|.+- ++++|+++|++||+++++|++|+.+.......... +......+.+..+++|+++ ....+|+++
T Consensus 181 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~ 260 (422)
T 3fvs_A 181 NTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVL 260 (422)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEE
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEE
Confidence 89999999997 59999999999999999999997644321111111 1111133466778899997 445688887
Q ss_pred eeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh---------chHHHHHHHHHHHHHHH
Q 038818 311 VKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF---------GVANLRNFLRSHVRMAQ 381 (486)
Q Consensus 311 ~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~---------g~~g~~~~~~~~~~~a~ 381 (486)
.+++ .............. ....+..+++...+ ..+.++++.++..++++
T Consensus 261 ~~~~-~~~~~~~~~~~~~~---------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (422)
T 3fvs_A 261 GPDH-IMKHLRTVHQNSVF---------------------HCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRD 318 (422)
T ss_dssp CCHH-HHHHHHHHHHTTTC---------------------CCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHH
T ss_pred eCHH-HHHHHHHHHhhccC---------------------CCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHH
Confidence 7553 22211110000000 01223333333322 24567888899999999
Q ss_pred HHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeE-------CCEeE
Q 038818 382 LFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMV-------AGIYF 453 (486)
Q Consensus 382 ~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~-------~~~~~ 453 (486)
++.+.|+++ ++++..+.....+.+.+........+ ...........++.+.+. +.|+.+.++..+ .+.++
T Consensus 319 ~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~ 396 (422)
T 3fvs_A 319 HMIRSLQSV-GLKPIIPQGSYFLITDISDFKRKMPD-LPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHY 396 (422)
T ss_dssp HHHHHHHTT-TCEEEBCSBSSEEEEECHHHHHHCCC-CCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSE
T ss_pred HHHHHHHHc-CCeecCCCeeeEEEEechhhcccccc-cccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCe
Confidence 999999998 88877555444555554321000000 000000000234455543 458754443333 24689
Q ss_pred EEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 454 IRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 454 lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
+|+++.. ++++|+++++.|++++++
T Consensus 397 iRis~~~---~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 397 IRFCFVK---DEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp EEEECCC---CHHHHHHHHHHHHHHHHC
T ss_pred EEEEecC---CHHHHHHHHHHHHHHHhh
Confidence 9999853 888999999999988764
No 118
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.89 E-value=5.5e-22 Score=198.76 Aligned_cols=309 Identities=14% Similarity=0.068 Sum_probs=197.6
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDP 196 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~ 196 (486)
++++.+++++|.+ .+++++|||+|+..++.+.+-. ++..|+++..+|.+...+++..|+
T Consensus 43 ~l~~~la~~~~~~---------~~~~~~~gt~al~~~~~~~~~~----------~gd~Vl~~~~~~~~~~~~~~~~g~-- 101 (393)
T 1mdo_A 43 ELEAAFCRLTGNQ---------YAVAVSSATAGMHIALMALGIG----------EGDEVITPSMTWVSTLNMIVLLGA-- 101 (393)
T ss_dssp HHHHHHHHHHCCS---------EEEEESCHHHHHHHHHHHTTCC----------TTCEEEEESSSCHHHHHHHHHTTC--
T ss_pred HHHHHHHHHhCCC---------cEEEecChHHHHHHHHHHcCCC----------CCCEEEeCCCccHhHHHHHHHCCC--
Confidence 4445667777753 4789999999998887765211 567788999999999999999999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccC
Q 038818 197 KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACIC 276 (486)
Q Consensus 197 ~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~ 276 (486)
+++.+|++++ ++.+|+++|+++|++. +.+|+++ +++|.+.|+++|.++|+++|+++++|++|+.+..+.
T Consensus 102 -~~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~~~---~~~G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~ 170 (393)
T 1mdo_A 102 -NPVMVDVDRD-TLMVTPEHIEAAITPQ------TKAIIPV---HYAGAPADLDAIYALGERYGIPVIEDAAHATGTSYK 170 (393)
T ss_dssp -EEEEECBCTT-TCCBCHHHHHHHCCTT------EEEECCB---CGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEET
T ss_pred -EEEEEeccCC-cCCCCHHHHHHhcCCC------ceEEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEECccccCCeEC
Confidence 9999999853 4789999999988642 3455554 479999999999999999999999999998544332
Q ss_pred ccchhhhcCCCCCCceeeccc--cccCCCCcceEEEeeCchHHHHHhcCCc-ccccCccCCCCCccCCCCcccc---CC-
Q 038818 277 PEFRHFIDGIEGADSFSLNAH--KWFFTTLDCCCLWVKNPNALIKALSTNP-EFLRNKASDSKQVVDYKDWQIT---LS- 349 (486)
Q Consensus 277 ~~~~~~~~~~~~aDsi~~~~h--K~l~~p~~~g~~~~~~~~~~~~~~~~~~-~y~~~~~~~~~~~~~~~~~~~~---~s- 349 (486)
. +.. +. .|.++.++| |+++++ .+|+++.++++.......... ....... ........+..+ .+
T Consensus 171 ~--~~~--~~--~d~~~~S~~k~K~l~~~-~~g~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~ 240 (393)
T 1mdo_A 171 G--RHI--GA--RGTAIFSFHAIKNITCA-EGGIVVTDNPQFADKLRSLKFHGLGVDAW---DRQSGGRAPQAEVLAPGY 240 (393)
T ss_dssp T--EET--TS--SSEEEEECCTTSSSCSS-SCEEEEESCHHHHHHHHHHTBTTEECC--------------CCEESSCCC
T ss_pred C--eec--CC--CCeEEEeCCCCCccccc-cceEEEeCCHHHHHHHHHHHhcCCcccch---hhhcccccccccccccCc
Confidence 1 111 11 899999999 999764 467777665554332211110 0000000 000000001111 11
Q ss_pred -CCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC------CeeEEEEEeecCCCCCCCCCCcc
Q 038818 350 -RRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR------NFAVVCFRVLPSASGLGDGKANE 422 (486)
Q Consensus 350 -r~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~------~~~~v~f~~~~~~~~~~~~~~~~ 422 (486)
.+...+....++. ..+++++..++..++++++.+.|.+++ +++...+ ...++++.+.+.. .
T Consensus 241 ~~~~~~~~~a~~~~--~l~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~---------~ 308 (393)
T 1mdo_A 241 KYNLPDLNAAIALA--QLQKLDALNARRAAIAAQYHQAMADLP-FQPLSLPSWEHIHAWHLFIIRVDEAR---------C 308 (393)
T ss_dssp BCCCCHHHHHHHHH--HHHTHHHHHHHHHHHHHHHHHHHHTSS-CEECCCCSSCEECCCSCEEEECCHHH---------H
T ss_pred cCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCC-cccccCCCCCCCceeEEEEEEecccc---------c
Confidence 1223333333333 345677888888899999999999986 8875432 2235667664200 0
Q ss_pred chHHHHHHHHHHHHhcCcEEEeeeeE----------------C-----CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 423 GANELNRKLLESINASGQLYVSHGMV----------------A-----GIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 423 ~~~~~~~~l~~~l~~~g~~~~~~~~~----------------~-----~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
+....++.+.|.++|+.+...... . ...++|+++ .+.++++|+++++++|+++++.
T Consensus 309 --~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~-~~~~t~~~i~~~~~~l~~~~~~ 385 (393)
T 1mdo_A 309 --GITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPL-FPDMTESDFDRVITALHQIAGQ 385 (393)
T ss_dssp --SSCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECC-CTTCCHHHHHHHHHHHHHHHC-
T ss_pred --ccCHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecC-CCCCCHHHHHHHHHHHHHHHhc
Confidence 001345677777778743221100 0 123799998 4678889999999999998754
Q ss_pred H
Q 038818 482 I 482 (486)
Q Consensus 482 l 482 (486)
.
T Consensus 386 ~ 386 (393)
T 1mdo_A 386 G 386 (393)
T ss_dssp -
T ss_pred C
Confidence 3
No 119
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.89 E-value=2.5e-21 Score=199.83 Aligned_cols=338 Identities=12% Similarity=0.057 Sum_probs=214.2
Q ss_pred ccccccChhhHHHHHHHHHHHHHHcC-CCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCC-CCeEEEecC
Q 038818 102 GFNWMSSPAATELENIVMDWLGEMLK-LPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENI-SRLVVYGSD 179 (486)
Q Consensus 102 ~~~~~~~~~~~~le~~~~~~l~~l~g-~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~-~~~~v~~s~ 179 (486)
...|..+.+..++++.+.+++++..| ++.+ ...+++|+|+++++..++.+.... |. +++.|+++.
T Consensus 122 ~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~-----~~~i~~t~G~~~ai~~~~~~l~~~--------gd~~~d~Vlv~~ 188 (498)
T 3ihj_A 122 LGSYSASQGVNCIREDVAAYITRRDGGVPAD-----PDNIYLTTGASDGISTILKILVSG--------GGKSRTGVMIPI 188 (498)
T ss_dssp ------CCSCHHHHHHHHHHHHHHTTTCCCC-----GGGEEEESSHHHHHHHHHHHHCCC--------CGGGSEEEEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhcCCCCCC-----cccEEEcCCHHHHHHHHHHHHcCC--------CCCCCCEEEEeC
Confidence 35677777778899999999999885 6432 127899999999998777655321 00 135888999
Q ss_pred CCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc---CCchHHHHHH
Q 038818 180 QTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV---DPLGPLCDIA 256 (486)
Q Consensus 180 ~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i---dpl~~I~~i~ 256 (486)
..|.++..+++.+|. +++.++++++++|.+|+++|+++|++... +..+.+|+++.++|+||.+ +++++|+++|
T Consensus 189 p~y~~~~~~~~~~g~---~~v~~~~~~~~~~~~d~~~le~~l~~~~~-~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la 264 (498)
T 3ihj_A 189 PQYPLYSAVISELDA---IQVNYYLDEENCWALNVNELRRAVQEAKD-HCDPKVLCIINPGNPTGQVQSRKCIEDVIHFA 264 (498)
T ss_dssp SCCTHHHHHHHHTTC---EEEEEECBGGGTTBCCHHHHHHHHHHHTT-TSEEEEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred CCchhHHHHHHHcCC---EEEEeeccccccCCCCHHHHHHHHHhhhc-cCCCeEEEEECCCCCCCCcCCHHHHHHHHHHH
Confidence 999999999999999 99999998766789999999999987532 2235678888999999999 4577899999
Q ss_pred HHhCceEEeeccccchhccCc----cchhhhcCC-----CCCCc-eeeccccccC--CCCcceEEEe--eCchHHHHHhc
Q 038818 257 KRYSIWVHVDAAYAGSACICP----EFRHFIDGI-----EGADS-FSLNAHKWFF--TTLDCCCLWV--KNPNALIKALS 322 (486)
Q Consensus 257 ~~~g~~lhvD~a~g~~~~~~~----~~~~~~~~~-----~~aDs-i~~~~hK~l~--~p~~~g~~~~--~~~~~~~~~~~ 322 (486)
++||+++++|.+|+.+..... .+......+ ..... +..+++|.+. ....+|++.+ .++........
T Consensus 265 ~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~ 344 (498)
T 3ihj_A 265 WEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVK 344 (498)
T ss_dssp HHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHH
T ss_pred HHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHH
Confidence 999999999999976543211 111111111 01223 3457899994 4556777765 45444332111
Q ss_pred CCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhc------------hHHHHHHHHHHHHHHHHHHHHHhCC
Q 038818 323 TNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFG------------VANLRNFLRSHVRMAQLFQELVGGD 390 (486)
Q Consensus 323 ~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g------------~~g~~~~~~~~~~~a~~l~~~L~~~ 390 (486)
....+. + ...+..++....+. .+...++.++..++++++.+.|+++
T Consensus 345 ~~~~~~-------------------~---~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 402 (498)
T 3ihj_A 345 LLSVRL-------------------C---PPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQV 402 (498)
T ss_dssp HHHHSC-------------------C---CCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHhccC-------------------C---CCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 100010 0 12222233322232 1223456677888999999999999
Q ss_pred CCeEEecCCCeeEEEE-EeecCCCCCCCCCCccchHHHHHH-HHHHHHhcCcEEEeeeeE---CCEeEEEEEecCCCCcH
Q 038818 391 NRFEIVAPRNFAVVCF-RVLPSASGLGDGKANEGANELNRK-LLESINASGQLYVSHGMV---AGIYFIRFAVGATLTED 465 (486)
Q Consensus 391 ~~~~~~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~-l~~~l~~~g~~~~~~~~~---~~~~~lR~~~~~~~tt~ 465 (486)
|++++. ++..+++.| ++..+.. ............ ... +.+.+.+.|+.+..+..+ .+..++|+++. .++
T Consensus 403 ~g~~~~-~p~gg~~~~~~l~~p~~-~~~~~~~~g~~~-~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~---~~~ 476 (498)
T 3ihj_A 403 PGIHCN-PLQGAMYAFPRIFIPAK-AVEAAQAHQMAP-DMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTIL---PPV 476 (498)
T ss_dssp TTEECC-CCCBSSEECCEECCCHH-HHHHHHHTTSCH-HHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECC---SCH
T ss_pred CCcEec-CCCeEEEEEEeccCchh-hhHHHHhcCCCc-HHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeC---CCH
Confidence 999875 556666665 4432100 000000000000 111 344455678865554333 34668999983 578
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 038818 466 RHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 466 ~did~~i~~l~~~~~~l~~ 484 (486)
++++++++.|.++.+++.+
T Consensus 477 e~l~~~i~~L~~~~~~~~~ 495 (498)
T 3ihj_A 477 EKLKTVLQKVKDFHINFLE 495 (498)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 8999999999999887764
No 120
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.89 E-value=1.6e-21 Score=192.92 Aligned_cols=331 Identities=11% Similarity=0.010 Sum_probs=205.1
Q ss_pred CCCcceecCCCCCHHHHHHHHHHhhc-CCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHH
Q 038818 73 SPYYFAYFPSSGSIAGFLGEMLSSGF-NVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAIL 151 (486)
Q Consensus 73 ~p~~~~~~~~~~~~~~~~~~~l~~~~-n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~ 151 (486)
+..|+|.-+. +..+..+.+++..+. ......|..++...+++ +++++++|.+ ..++++|||+|+.
T Consensus 11 ~~~~l~~~~~-p~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~----~~la~~~~~~---------~~i~~~~G~~a~~ 76 (357)
T 3lws_A 11 QTTGQISGHG-KRNVGVLKTAFAAVADEMASDQYGTGAIIEPFE----QKFADVLGMD---------DAVFFPSGTMAQQ 76 (357)
T ss_dssp TCSEESSBSS-CCBHHHHHHHHTTSCTTCBCEETTEETTHHHHH----HHHHHHHTCS---------EEEEESCHHHHHH
T ss_pred hhcccccCCC-CCCHHHHHHHHHHhhcccCcccccCChHHHHHH----HHHHHHhCCC---------cEEEecCcHHHHH
Confidence 3457776554 445555666555422 11123444445544444 5678888874 3467788999998
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH---HHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCC
Q 038818 152 CTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK---AAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAG 228 (486)
Q Consensus 152 ~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~---a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g 228 (486)
.++.+....- ++.+|+++...|++... .+...|+ +++.+|.+ ++.+|+++|+++.+
T Consensus 77 ~al~~~~~~g---------d~~~vi~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~---~~~~d~~~l~~~~~------ 135 (357)
T 3lws_A 77 VALRIWSDET---------DNRTVAYHPLCHLEIHEQDGLKELHPI---ETILVGAA---DRLMTLDEIKALPD------ 135 (357)
T ss_dssp HHHHHHHHHH---------TCCEEEECTTCHHHHSSTTHHHHHSSC---EEEECSCT---TSCCCHHHHHTCCS------
T ss_pred HHHHHHhhcC---------CCcEEEecccceeeeeccchhhhccCc---EEEEecCC---CCCcCHHHHhcCcC------
Confidence 8887766531 22378888888887655 3556677 77777743 46899999998721
Q ss_pred CccEEEEeecCCccc-cccCC---chHHHHHHHHhCceEEeeccccchhc--cCccchhhhcCCCCCCceeeccccccCC
Q 038818 229 LIPLFLCATVGTTAI-TTVDP---LGPLCDIAKRYSIWVHVDAAYAGSAC--ICPEFRHFIDGIEGADSFSLNAHKWFFT 302 (486)
Q Consensus 229 ~~p~~vv~~~gtt~~-G~idp---l~~I~~i~~~~g~~lhvD~a~g~~~~--~~~~~~~~~~~~~~aDsi~~~~hK~l~~ 302 (486)
+.+|+++.++|++ |.+.| +++|+++|++||+++|+|+||..... ......... ..+|.++.++||++++
T Consensus 136 --~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~~~~ 210 (357)
T 3lws_A 136 --IACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA---GLFDSIYISFYKGLGG 210 (357)
T ss_dssp --CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH---TTSSEEEEESSSTTCC
T ss_pred --cceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH---hcCCEEEEeccccCCC
Confidence 3368888899888 88765 89999999999999999999862211 111111111 3578899999999988
Q ss_pred CCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHH
Q 038818 303 TLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQL 382 (486)
Q Consensus 303 p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~ 382 (486)
|.| |+++. +++.......... ..... .+....+. ..++..+ +...+.+++..+++++
T Consensus 211 ~~g-g~~~~-~~~~~~~~~~~~~-~~~~~-----------------~~~~~~~~-~~~~~~l--~~~~~~~~~~~~~~~~ 267 (357)
T 3lws_A 211 IAG-AILAG-PAAFCQTARIWKR-RYGGD-----------------LISLYPYI-VSADYYY--ELRKDRMGQYYEQAKQ 267 (357)
T ss_dssp SSC-EEEEE-CHHHHHHHHHHHH-HTTCC-----------------CSCCHHHH-HHHHHHH--HHHTTCHHHHHHHHHH
T ss_pred Cce-EEEEc-CHHHHHHHHHHHH-HhcCC-----------------cccchHHH-HHHHHHH--HHHHHHHHHHHHHHHH
Confidence 876 66554 4444332211100 00000 00011111 1111112 1123344556778899
Q ss_pred HHHHHhCCCCeEEe-cCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeE-CCEeEEEEEecC
Q 038818 383 FQELVGGDNRFEIV-APRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMV-AGIYFIRFAVGA 460 (486)
Q Consensus 383 l~~~L~~~~~~~~~-~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~~~~~lR~~~~~ 460 (486)
+.+.|+++|++++. .++..+.+.+.+.... .....++.+.|.++|+.+..+... .+..++|+++..
T Consensus 268 l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~ 335 (357)
T 3lws_A 268 LAEQFNALPGVHTTPEVPVSNMFHLHFDGQA------------ADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGD 335 (357)
T ss_dssp HHHHHHTSTTEEEESSSCSSSEEEEEEESCH------------HHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCT
T ss_pred HHHHHHhCCCCeeccCCCcceEEEEEecCCh------------HHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecc
Confidence 99999999999984 5667788888776421 122356677788888753332211 457799999864
Q ss_pred CC--CcHHHHHHHHHHHHHH
Q 038818 461 TL--TEDRHVIAAWKVVQEK 478 (486)
Q Consensus 461 ~~--tt~~did~~i~~l~~~ 478 (486)
.+ .+++++++.++.|.+.
T Consensus 336 ~~~~~~~~~l~~al~~l~~a 355 (357)
T 3lws_A 336 AYGELDQQTRDAGFARLRQA 355 (357)
T ss_dssp TGGGSCHHHHHHHHHHHHHH
T ss_pred hhhhcCHHHHHHHHHHHHHh
Confidence 43 5777888888887765
No 121
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.89 E-value=5.9e-22 Score=199.12 Aligned_cols=288 Identities=18% Similarity=0.201 Sum_probs=193.9
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHH-
Q 038818 111 ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAA- 189 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~- 189 (486)
......++++++++++|.+ ..+++++|++|+..++.+... +++.|+++...|.++...+
T Consensus 62 ~~~~~~~l~~~la~~~g~~---------~~i~~~sG~~a~~~~l~~~~~-----------~gd~vi~~~~~~~~~~~~~~ 121 (398)
T 2rfv_A 62 GNPTTDALEKKLAVLERGE---------AGLATASGISAITTTLLTLCQ-----------QGDHIVSASAIYGCTHAFLS 121 (398)
T ss_dssp CCHHHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEEESSSCHHHHHHHH
T ss_pred CChHHHHHHHHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCCcccHHHHHH
Confidence 3455667888999999875 246777788999888776632 5677888999999987776
Q ss_pred ---HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEee
Q 038818 190 ---QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVD 266 (486)
Q Consensus 190 ---~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD 266 (486)
+..|+ +++.+|.+ |+++|+++++++ +.+|+++.++|++|.+.|+++|+++|++||+++|+|
T Consensus 122 ~~~~~~g~---~~~~v~~~-------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D 185 (398)
T 2rfv_A 122 HSMPKFGI---NVRFVDAA-------KPEEIRAAMRPE------TKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVD 185 (398)
T ss_dssp THHHHTTC---EEEEECTT-------SHHHHHHHCCTT------EEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHcCC---EEEEeCCC-------CHHHHHHhcCCC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE
Confidence 77888 88888763 899999888643 457888999999999999999999999999999999
Q ss_pred ccccchhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCc
Q 038818 267 AAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDW 344 (486)
Q Consensus 267 ~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 344 (486)
++|+.+....+ . . .++|.++.++||++++|.+ +|+++.+++. +...+.. +...
T Consensus 186 e~~~~~~~~~~-~-~-----~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~-~~~~~~~---~~~~-------------- 240 (398)
T 2rfv_A 186 NTFMSPYCQQP-L-Q-----LGADIVVHSVTKYINGHGDVIGGIIVGKQEF-IDQARFV---GLKD-------------- 240 (398)
T ss_dssp CTTTCTTTCCG-G-G-----GTCSEEEEETTTTTTCSSCCCCEEEEECHHH-HHHHHHT---HHHH--------------
T ss_pred CCCcccccCCc-h-h-----hCCcEEEEeCcccccCCCCceEEEEEECHHH-HHHHHHH---HHHh--------------
Confidence 99986554322 1 1 1689999999999988876 5888776542 2211111 1100
Q ss_pred cccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEE--------------ecC---CCeeEEEEE
Q 038818 345 QITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEI--------------VAP---RNFAVVCFR 407 (486)
Q Consensus 345 ~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~--------------~~~---~~~~~v~f~ 407 (486)
.. +-....+..|+.++.+ +.+....++..++++++.+.|++.+.++- ..+ ...++++|.
T Consensus 241 -~~-~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~ 316 (398)
T 2rfv_A 241 -IT-GGCMSPFNAWLTLRGV--KTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFE 316 (398)
T ss_dssp -TT-CCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEE
T ss_pred -CC-CCCCCHHHHHHHHhhh--hhHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEE
Confidence 00 0012345556665554 33455566677788888888877644322 211 246788887
Q ss_pred eecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeee----------------------ECC--EeEEEEEecCCCC
Q 038818 408 VLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGM----------------------VAG--IYFIRFAVGATLT 463 (486)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~----------------------~~~--~~~lR~~~~~~~t 463 (486)
+.+. .....++.+.+...|+. ++.+. ..+ .+.+|+++. ..+
T Consensus 317 ~~~~-------------~~~~~~l~~~~~~~~i~-~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~-~~~ 381 (398)
T 2rfv_A 317 IAGG-------------LEAGRRMINSVELCLLA-VSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVG-LED 381 (398)
T ss_dssp ETTH-------------HHHHHHHHTTCSSSEEC-SCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECC-SSC
T ss_pred EcCC-------------HHHHHHHHHhCCcceec-cCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEec-CCC
Confidence 6531 12233444444333321 11110 012 478999996 578
Q ss_pred cHHHHHHHHHHHHHH
Q 038818 464 EDRHVIAAWKVVQEK 478 (486)
Q Consensus 464 t~~did~~i~~l~~~ 478 (486)
++++|++++++|+++
T Consensus 382 ~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 382 PEDIINDLEHAIRKA 396 (398)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh
Confidence 888999999998764
No 122
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.2e-22 Score=207.36 Aligned_cols=342 Identities=12% Similarity=0.060 Sum_probs=219.7
Q ss_pred HHHHHHHHHhhcCC-CccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHc
Q 038818 87 AGFLGEMLSSGFNV-VGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEI 165 (486)
Q Consensus 87 ~~~~~~~l~~~~n~-~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~ 165 (486)
+..+.+.+...+.. ....|....+..++++.+.+++.+.+|.+.+. ..+++|+||++|+..++.+..+
T Consensus 72 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-----~~v~~t~G~~~al~~~~~~l~~------ 140 (447)
T 3b46_A 72 PQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKA-----ENVTVTTGANEGILSCLMGLLN------ 140 (447)
T ss_dssp CHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCG-----GGEEEESHHHHHHHHHHHHHCC------
T ss_pred CHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEeCCHHHHHHHHHHHHcC------
Confidence 34556666666654 23355544456889999999999988864321 2689999999999888877643
Q ss_pred cccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCC----------CcccCHHHHHHHHHHHHHCCCccEEEE
Q 038818 166 GRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSS----------SFTLTPESLQAAIDLDIQAGLIPLFLC 235 (486)
Q Consensus 166 ~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~----------~~~~d~~~L~~~l~~~~~~g~~p~~vv 235 (486)
+++.|+++...|.++..+++..|. +++.+|+++.+ ++.+|+++|+++|++. +.+|+
T Consensus 141 -----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~ 206 (447)
T 3b46_A 141 -----AGDEVIVFEPFFDQYIPNIELCGG---KVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSK------TKAVI 206 (447)
T ss_dssp -----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTT------EEEEE
T ss_pred -----CCCEEEEeCCCchhHHHHHHHcCC---EEEEEeCCCccccccccccccCcccCHHHHHHhhccC------CeEEE
Confidence 567788888999999999999999 99999987532 4689999999988632 45778
Q ss_pred eecCCcccccc---CCchHHHHHHHHhCceEEeeccccchhccCccchhh--h-cCCCCCCceeeccccccCC-CCcceE
Q 038818 236 ATVGTTAITTV---DPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHF--I-DGIEGADSFSLNAHKWFFT-TLDCCC 308 (486)
Q Consensus 236 ~~~gtt~~G~i---dpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~--~-~~~~~aDsi~~~~hK~l~~-p~~~g~ 308 (486)
++.++|++|.+ +++++|+++|++||+++++|++|+.+.... ..... + .+....|.+..++||+++. ...+|+
T Consensus 207 l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~ 285 (447)
T 3b46_A 207 INTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD-SFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGW 285 (447)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEE
T ss_pred EeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC-CCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEE
Confidence 88999999998 569999999999999999999998644311 11111 1 1112578889999999973 445898
Q ss_pred EEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHH
Q 038818 309 LWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFG-VANLRNFLRSHVRMAQLFQELV 387 (486)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L 387 (486)
++.++++.... +.....+.. . ++-.....++..++.... .+.++++.++..++++++.+.|
T Consensus 286 ~~~~~~~l~~~-l~~~~~~~~----------------~-~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L 347 (447)
T 3b46_A 286 VLSLNAELLSY-AAKAHTRIC----------------F-ASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIF 347 (447)
T ss_dssp EECSCHHHHHH-HHHHHHHHT----------------S-SCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCHHHHHH-HHHHHhhcc----------------C-CCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 88844444332 111000000 0 000011112222333221 3457778888899999999999
Q ss_pred hCCCCeEEecCCCeeEEEEEeecCCCCCCCCCC--cc-chHHHHHHHHHHHH-hcCcEEEeeeeEC-------CEeEEEE
Q 038818 388 GGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKA--NE-GANELNRKLLESIN-ASGQLYVSHGMVA-------GIYFIRF 456 (486)
Q Consensus 388 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~--~~-~~~~~~~~l~~~l~-~~g~~~~~~~~~~-------~~~~lR~ 456 (486)
+++ ++++..+.....+.+.+..... +++.. .. .......++.+.+. +.|+.+..+..+. +..++|+
T Consensus 348 ~~~-g~~~~~~~~g~~~~~~~~~~~~--p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRl 424 (447)
T 3b46_A 348 DEL-GLPYTAPEGTYFVLVDFSKVKI--PEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRF 424 (447)
T ss_dssp HHH-TCCEECCSBSSEEEEECTTCCC--CTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEE
T ss_pred HHC-CCeecCCCeeEEEEEecccccC--ccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEE
Confidence 887 7877644434445555542100 00000 00 00011245666665 4687544433221 2568999
Q ss_pred EecCCCCcHHHHHHHHHHHHHH
Q 038818 457 AVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 457 ~~~~~~tt~~did~~i~~l~~~ 478 (486)
++. .++++|+++++.|+++
T Consensus 425 s~~---~~~e~l~~~~~~l~~~ 443 (447)
T 3b46_A 425 AVC---KDDAYLENAVERLKLL 443 (447)
T ss_dssp ECC---SCHHHHHHHHHHGGGG
T ss_pred EEe---CCHHHHHHHHHHHHHH
Confidence 985 2678999999988763
No 123
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.89 E-value=1.2e-21 Score=196.30 Aligned_cols=284 Identities=14% Similarity=0.080 Sum_probs=195.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHH--
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAA-- 189 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~-- 189 (486)
.....++++.+++++|.+ ..++++|||+|+..++.++.. ++..|+++...|.+....+
T Consensus 65 ~~~~~~l~~~la~~~g~~---------~~~~~~sGt~A~~~al~~~~~-----------~gd~Vi~~~~~y~~~~~~~~~ 124 (392)
T 3qhx_A 65 NPTRTALEAALAAVEDAA---------FGRAFSSGMAAADCALRAMLR-----------PGDHVVIPDDAYGGTFRLIDK 124 (392)
T ss_dssp CHHHHHHHHHHHHHTTCS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEeCCCcchHHHHHHH
Confidence 344456667889998875 468899999999888776532 5667888999998876665
Q ss_pred --HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeec
Q 038818 190 --QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDA 267 (486)
Q Consensus 190 --~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~ 267 (486)
+..|+ +++.+|++ |+++|+++|+++ +.+|+++.++|++|.+.|+++|+++|++||+++|+|+
T Consensus 125 ~~~~~g~---~~~~v~~~-------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~ 188 (392)
T 3qhx_A 125 VFTGWNV---EYTPVALA-------DLDAVRAAIRPT------TRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDN 188 (392)
T ss_dssp TGGGGTC---EEEEECTT-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEEC
T ss_pred HHHhcCc---EEEEeCCC-------CHHHHHHhhCCC------CeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEEC
Confidence 55677 88888764 899999998753 4578899999999999999999999999999999999
Q ss_pred cccchhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCcc
Q 038818 268 AYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQ 345 (486)
Q Consensus 268 a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 345 (486)
+|+.+....+ .. .++|.++.++||+++++.. +|+++.+++......... .
T Consensus 189 ~~~~~~~~~~-~~------~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~----~----------------- 240 (392)
T 3qhx_A 189 TFASPALQQP-LS------LGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFL----Q----------------- 240 (392)
T ss_dssp TTTCTTTCCG-GG------GTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHH----H-----------------
T ss_pred CCcccccCCh-HH------hCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHH----H-----------------
Confidence 9976543222 11 1689999999999997743 788877765543321110 0
Q ss_pred ccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCC-----------------eeEEEEEe
Q 038818 346 ITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRN-----------------FAVVCFRV 408 (486)
Q Consensus 346 ~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-----------------~~~v~f~~ 408 (486)
...+.....+..|+.++.+ +.+..++++..++++++.+.|+++|.+..+..|. .++++|.+
T Consensus 241 ~~~g~~~~~~~~~~~~~~l--~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l 318 (392)
T 3qhx_A 241 NGAGAVPGPFDAYLTMRGL--KTLVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRM 318 (392)
T ss_dssp HHHCCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEE
T ss_pred HhcCCCCCHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEe
Confidence 0011223456667666644 4566778888999999999999998876543221 45788888
Q ss_pred ecCCCCCCCCCCccchHHHHHHHHHHHHhcCcE---------EEeeeeE-----------CCEeEEEEEecCCCCcHHHH
Q 038818 409 LPSASGLGDGKANEGANELNRKLLESINASGQL---------YVSHGMV-----------AGIYFIRFAVGATLTEDRHV 468 (486)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~---------~~~~~~~-----------~~~~~lR~~~~~~~tt~~di 468 (486)
.+. ....+++.+.+...++. ...+... -..+.+|+|++ ..+++++|
T Consensus 319 ~~~-------------~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg-~e~~~~~i 384 (392)
T 3qhx_A 319 RAG-------------RTAAEQLCAKTNIFILAESLGSVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVG-IEDVADLL 384 (392)
T ss_dssp TTC-------------HHHHHHHHHHCSSSEECSCCCCSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECC-SSCHHHHH
T ss_pred CCc-------------HHHHHHHHHhCCCceECCCCCCCCceeeCcccccccccCHHHcCCCCCeEEEEec-cCCHHHHH
Confidence 642 23345666655433321 1111100 12457999995 45666677
Q ss_pred HHHHHHH
Q 038818 469 IAAWKVV 475 (486)
Q Consensus 469 d~~i~~l 475 (486)
+.+.++|
T Consensus 385 ~~l~~al 391 (392)
T 3qhx_A 385 DDLKQAL 391 (392)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7776655
No 124
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.89 E-value=2.8e-21 Score=194.42 Aligned_cols=286 Identities=14% Similarity=0.139 Sum_probs=196.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH----H
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK----A 188 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~----a 188 (486)
....++++.+++++|.+ ..++++||++|+..++.+... +++.|+++...|.+... .
T Consensus 62 ~~~~~l~~~ia~~~g~~---------~~i~~~~g~~ai~~~~~~l~~-----------~gd~Vl~~~~~y~~~~~~~~~~ 121 (404)
T 1e5e_A 62 PTVSNLEGKIAFLEKTE---------ACVATSSGMGAIAATVLTILK-----------AGDHLISDECLYGCTHALFEHA 121 (404)
T ss_dssp HHHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEEESCCCHHHHHHHHTH
T ss_pred hHHHHHHHHHHHHhCCC---------cEEEeCChHHHHHHHHHHHhC-----------CCCEEEEeCCCchhHHHHHHHH
Confidence 33445667778888874 357888889988877765532 56778889999998877 7
Q ss_pred HHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHH-hCceEEeec
Q 038818 189 AQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKR-YSIWVHVDA 267 (486)
Q Consensus 189 ~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~-~g~~lhvD~ 267 (486)
++..|+ +++.+|.+ |+++|+++|++. +.+|+++.++|++|.+.|+++|+++|++ +|+++++|+
T Consensus 122 ~~~~g~---~~~~v~~~-------d~~~l~~~i~~~------t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De 185 (404)
T 1e5e_A 122 LTKFGI---QVDFINTA-------IPGEVKKHMKPN------TKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADN 185 (404)
T ss_dssp HHHTTC---EEEEECTT-------STTHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEEC
T ss_pred HHHcCC---EEEEECCC-------CHHHHHHhcCCC------CcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEEC
Confidence 788899 89888864 778899888643 4578899999999999999999999999 999999999
Q ss_pred cccchhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCcc
Q 038818 268 AYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQ 345 (486)
Q Consensus 268 a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 345 (486)
+|+.+....+ .. -++|.++.++||++++|.+ +|+++.+++. +.+.+.....+..
T Consensus 186 ~~~~~~~~~~-~~------~~~di~~~S~sK~~~~~g~ri~G~~~~~~~~-~~~~l~~~~~~~~---------------- 241 (404)
T 1e5e_A 186 TFCSPMITNP-VD------FGVDVVVHSATKYINGHTDVVAGLICGKADL-LQQIRMVGIKDIT---------------- 241 (404)
T ss_dssp TTTCTTTCCG-GG------GTCSEEEEETTTTTTCSSCCCCEEEEECHHH-HHHHHHTCCCCCC----------------
T ss_pred CCchhhhCCc-cc------cCCEEEEEcCccccCCCCCCeEEEEEECHHH-HHHHHHHHHHhCC----------------
Confidence 9987654322 11 1689999999999998876 6888876543 2312221111100
Q ss_pred ccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeE-EecC------------C----CeeEEEEEe
Q 038818 346 ITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFE-IVAP------------R----NFAVVCFRV 408 (486)
Q Consensus 346 ~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~------------~----~~~~v~f~~ 408 (486)
+.....+..|++++.+ +.+..+.++..++++.+.+.|++.+.+. +..+ + ..++++|.+
T Consensus 242 ---g~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~ 316 (404)
T 1e5e_A 242 ---GSVISPHDAWLITRGL--STLNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFIL 316 (404)
T ss_dssp ---CCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEE
T ss_pred ---CCCCCHHHHHHHHHhH--hHHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEe
Confidence 0112345566666655 3345667777888888888888776553 2211 1 267888866
Q ss_pred ecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeE-------------------------CC--EeEEEEEecCC
Q 038818 409 LPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMV-------------------------AG--IYFIRFAVGAT 461 (486)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-------------------------~~--~~~lR~~~~~~ 461 (486)
.. . ...+.+.+.+.|++ +.+..+ .| .+++|+++..
T Consensus 317 ~~--------------~--~~~~~~~l~~~~i~-~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~- 378 (404)
T 1e5e_A 317 KS--------------G--FEGAKKLLDNLKLI-TLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI- 378 (404)
T ss_dssp TT--------------H--HHHHHHHHHTCSSS-EESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS-
T ss_pred CC--------------C--HHHHHHHHHhCCCc-eeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC-
Confidence 42 1 12233344455652 222111 12 4689999853
Q ss_pred CCcHHHHHHHHHHHHHHHHHHhhc
Q 038818 462 LTEDRHVIAAWKVVQEKLDGILAT 485 (486)
Q Consensus 462 ~tt~~did~~i~~l~~~~~~l~~~ 485 (486)
++++++++.|+++++.++++
T Consensus 379 ----e~~~~li~~l~~al~~~~~~ 398 (404)
T 1e5e_A 379 ----EDADELIADFKQGLDALLRS 398 (404)
T ss_dssp ----SCHHHHHHHHHHHHHHHHCC
T ss_pred ----CCHHHHHHHHHHHHHHHHHh
Confidence 58999999999999887764
No 125
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.89 E-value=2.5e-21 Score=194.22 Aligned_cols=318 Identities=15% Similarity=0.062 Sum_probs=199.5
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDP 196 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~ 196 (486)
++++.+++++|.+ .+++++|||+|+..++.+.+.. ++..|+++..+|.++..+++..|+
T Consensus 36 ~l~~~la~~~~~~---------~v~~~~ggt~al~~~~~~l~~~----------~gd~Vl~~~~~~~~~~~~~~~~g~-- 94 (394)
T 1o69_A 36 RFEQSVKDYSKSE---------NALALNSATAALHLALRVAGVK----------QDDIVLASSFTFIASVAPICYLKA-- 94 (394)
T ss_dssp HHHHHHHHHHCCS---------EEEEESCHHHHHHHHHHHTTCC----------TTCEEEEESSSCGGGTHHHHHTTC--
T ss_pred HHHHHHHHHhCCC---------cEEEeCCHHHHHHHHHHHcCCC----------CCCEEEECCCccHHHHHHHHHcCC--
Confidence 3445566777752 5899999999998887775211 567788999999999999999999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccC
Q 038818 197 KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACIC 276 (486)
Q Consensus 197 ~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~ 276 (486)
+++.+|+++ ++.+|+++|+++|++.. ..+.+|+++. ++|...|+++|.++|+++|+++|+|+||+.+..+.
T Consensus 95 -~~~~v~~~~--~~~~d~~~l~~~i~~~~---~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~ 165 (394)
T 1o69_A 95 -KPVFIDCDE--TYNIDVDLLKLAIKECE---KKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYK 165 (394)
T ss_dssp -EEEEECBCT--TSSBCHHHHHHHHHHCS---SCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEET
T ss_pred -EEEEEEeCC--CCCcCHHHHHHHHhccc---CCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECcCcccceeC
Confidence 999999973 67999999999997521 0133566654 78999999999999999999999999998433332
Q ss_pred ccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchH
Q 038818 277 PEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALK 356 (486)
Q Consensus 277 ~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~ 356 (486)
.. . ...+..+|.++++.||.++ |.++|+++++++............+.... .... ..+.+.++....
T Consensus 166 ~~--~-~~~~~~~~~~s~s~~K~l~-~~~~G~~~~~~~~l~~~l~~~~~~~~~~~-----~~~~----~~~~g~~~~~~~ 232 (394)
T 1o69_A 166 NK--A-LGTFGEFGVYSYNGNKIIT-TSGGGMLIGKNKEKIEKARFYSTQARENC-----LHYE----HLDYGYNYRLSN 232 (394)
T ss_dssp TE--E-TTSSSSEEEEECCTTSSSC-CSSCEEEEESCHHHHHHHHHHTBTCCCSS-----SSCC----CSSCCCBCBCCH
T ss_pred Cc--c-cccccCcEEEEEeCCccCC-CCCceEEEECCHHHHHHHHHHHHhccccC-----cccc----ccccCcccCcCH
Confidence 21 1 1112358899999999876 56799999876654433221111111000 0000 111222232322
Q ss_pred HHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC-----CeeEEEEEeecCC--CCCCC----C-CCccch
Q 038818 357 LWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR-----NFAVVCFRVLPSA--SGLGD----G-KANEGA 424 (486)
Q Consensus 357 ~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----~~~~v~f~~~~~~--~~~~~----~-~~~~~~ 424 (486)
+.+++.....+.+++.+++..++++++.+.|+++ +++..++ .+.+++|.+.+.. .+... . ......
T Consensus 233 ~~aa~~l~~l~~l~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (394)
T 1o69_A 233 VLGAIGVAQMEVLEQRVLKKREIYEWYKEFLGEY--FSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITL 310 (394)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTT--EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--ccccCCCCCCcceeEEEEEEecchhhcccccccccccccccccc
Confidence 2332221123557788899999999999999886 6665432 2225677765310 00000 0 000000
Q ss_pred HHHHHHHHHHHHhcCcEEEeee-------eECC----E---------eEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 425 NELNRKLLESINASGQLYVSHG-------MVAG----I---------YFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 425 ~~~~~~l~~~l~~~g~~~~~~~-------~~~~----~---------~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
+.....+.+.|.++|+.+-... .+.. . ..+|+.. ++.+|++|||+++++|+++.+
T Consensus 311 ~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~t~edi~~~~~~l~~~~~ 385 (394)
T 1o69_A 311 HPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPS-GTAMSKDDVYEISKLILKSIK 385 (394)
T ss_dssp CHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECC-CTTCCHHHHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccC-CCCCCHHHHHHHHHHHHHHHh
Confidence 1123467777877887432210 1111 0 3455555 688999999999999998753
No 126
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.89 E-value=4e-21 Score=191.29 Aligned_cols=317 Identities=9% Similarity=0.001 Sum_probs=209.5
Q ss_pred HHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccc
Q 038818 88 GFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGR 167 (486)
Q Consensus 88 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 167 (486)
..+.+.+...+ .....|.......++++++.+|+.+.+|.+.. ....++|+|||+++..++.+...
T Consensus 39 ~~v~~a~~~~~-~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~-----~~~i~~t~g~~~al~~~~~~~~~-------- 104 (376)
T 3ezs_A 39 KFIQDALKNHT-HSLNIYPKSAFEESLRAAQRGFFKRRFKIELK-----ENELISTLGSREVLFNFPSFVLF-------- 104 (376)
T ss_dssp HHHHHHHHTTG-GGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCC-----GGGEEEESSSHHHHHHHHHHHTT--------
T ss_pred HHHHHHHHHhh-hhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-----HHHEEECcCcHHHHHHHHHHHcC--------
Confidence 44556666555 22334444445678999999999999998421 12789999999999888777643
Q ss_pred cCCC--CeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 168 ENIS--RLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 168 ~~~~--~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
+ ++.|+++..+|.++...++..|. +++.+|+++++ .+++ +|++++.+.+ .+|+++.++|++|.
T Consensus 105 ---~~~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~--~~~~-~l~~~~~~~~------~~v~~~~p~nptG~ 169 (376)
T 3ezs_A 105 ---DYQNPTIAYPNPFYQIYEGAAKFIKA---KSLLMPLTKEN--DFTP-SLNEKELQEV------DLVILNSPNNPTGR 169 (376)
T ss_dssp ---TCSSCEEEEEESCCTHHHHHHHHTTC---EEEEEECCGGG--TSCC-CCCHHHHHHC------SEEEECSSCTTTCC
T ss_pred ---CCCCCEEEEecCCcHhHHHHHHHcCC---EEEEcccCCCC--Ccch-hHHhhhccCC------CEEEEcCCCCCcCC
Confidence 5 67888899999999999999999 99999998632 4555 7777777643 36777899999999
Q ss_pred cCC---chHHHHHHHHhCceEEeeccccchhccCccchhhhcC-------CCCCCceeeccccccC-CCCcceEEEeeCc
Q 038818 246 VDP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDG-------IEGADSFSLNAHKWFF-TTLDCCCLWVKNP 314 (486)
Q Consensus 246 idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~-------~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~ 314 (486)
+-| +++|+++|++||+++++|++|+.+.... .....+.. ....+.+..+++|+++ .+..+|+++.+ +
T Consensus 170 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~ 247 (376)
T 3ezs_A 170 TLSLEELISWVKLALKHDFILINDECYSEIYENT-PPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGD-S 247 (376)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSS-CCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEEC-H
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEEccchhhccCC-CCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeC-H
Confidence 976 6777788999999999999998754322 11111110 1256678889999996 55567887764 3
Q ss_pred hHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHhCCCCe
Q 038818 315 NALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF-GVANLRNFLRSHVRMAQLFQELVGGDNRF 393 (486)
Q Consensus 315 ~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~ 393 (486)
+... .+.....+. +.....+..+++...+ ..+.+++..++..++.+++.+.|+ ++
T Consensus 248 ~~~~-~~~~~~~~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~---~~ 303 (376)
T 3ezs_A 248 RLLE-KYKAFRAYL--------------------GYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIFK---NT 303 (376)
T ss_dssp HHHH-HHHHHHTTT--------------------CCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHST---TC
T ss_pred HHHH-HHHHHHhhh--------------------cCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhc---CC
Confidence 3332 221100000 0011223333333333 234577888888889999999987 44
Q ss_pred EEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHh-cCcEEEeeeeEC----CEeEEEEEecCCCCcHHHH
Q 038818 394 EIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINA-SGQLYVSHGMVA----GIYFIRFAVGATLTEDRHV 468 (486)
Q Consensus 394 ~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~----~~~~lR~~~~~~~tt~~di 468 (486)
. .+.....+.+.+. . ...+.+.|.+ .|+.+.++..+. +..++|++++. ++++|
T Consensus 304 ~--~~~~~~~~~~~~~-~----------------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~---~~~~i 361 (376)
T 3ezs_A 304 L--IYPYSFYVYLPVQ-N----------------GENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY---DTPLL 361 (376)
T ss_dssp C--CCSBSSEEEEECS-C----------------HHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS---CHHHH
T ss_pred C--CCCcceEEEEECC-C----------------HHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC---CHHHH
Confidence 4 2333344444543 1 2345666665 688544433222 45789999852 78899
Q ss_pred HHHHHHHHHHHHH
Q 038818 469 IAAWKVVQEKLDG 481 (486)
Q Consensus 469 d~~i~~l~~~~~~ 481 (486)
+++++.|++++++
T Consensus 362 ~~~l~~l~~~l~~ 374 (376)
T 3ezs_A 362 EKPLEIIETYREN 374 (376)
T ss_dssp HHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988754
No 127
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.88 E-value=7.9e-22 Score=195.45 Aligned_cols=306 Identities=11% Similarity=0.023 Sum_probs=194.8
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHH--
Q 038818 108 SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSAL-- 185 (486)
Q Consensus 108 ~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~-- 185 (486)
++...++.+++++++++++|.+++. ...++|+|||+++..++.+... +++.|++....|++.
T Consensus 44 ~~~~~~~~~~~~~~la~~~g~~~~~-----~~i~~t~g~t~a~~~~~~~l~~-----------~gd~vl~~~~~~~~~~~ 107 (362)
T 2c0r_A 44 GAVYEAVHNEAQARLLALLGNPTGY-----KVLFIQGGASTQFAMIPMNFLK-----------EGQTANYVMTGSWASKA 107 (362)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCSSE-----EEEEESSHHHHHHHHHHHHHCC-----------TTCEEEEEECSHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCc-----EEEEECCCchHHHHHHHHhcCC-----------CCCeEEEEecCcHhHHH
Confidence 5556677788999999999997531 0246789999999877766532 455565555666663
Q ss_pred HHHHHHcCCCCCCeEEEecCCC--CCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc-cCCchHHHHHHHHhCce
Q 038818 186 QKAAQIAGIDPKNFRAIKTTKS--SSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT-VDPLGPLCDIAKRYSIW 262 (486)
Q Consensus 186 ~~a~~~~G~g~~~v~~v~~d~~--~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~-idpl~~I~~i~~~~g~~ 262 (486)
...++..| +++.+|++.+ ....+|.++++ +++ .+.+|++++++|++|. +.|+++| +|++
T Consensus 108 ~~~~~~~g----~~~~v~~~~~~~~~~~~~~~~~~--i~~------~t~~v~~~~~~n~tG~~~~~l~~i------~~~~ 169 (362)
T 2c0r_A 108 LKEAKLIG----DTHVAASSEASNYMTLPKLQEIQ--LQD------NAAYLHLTSNETIEGAQFKAFPDT------GSVP 169 (362)
T ss_dssp HHHHHHHS----CEEEEEECGGGTTCSCCCGGGCC--CCT------TEEEEEEESEETTTTEECSSCCCC------TTSC
T ss_pred HHHHHHhC----CeEEEecccccccccCCCHHHcc--cCC------CcCEEEEeCCcCccceeccccccc------CCCE
Confidence 35555554 4777887621 11235666553 332 2568899999999999 4899988 8999
Q ss_pred EEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCC
Q 038818 263 VHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYK 342 (486)
Q Consensus 263 lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 342 (486)
+|+|++|+.+....+ +...|.++.++||+++ |.|+|+++++++.. . .+....+++..... .. .
T Consensus 170 vivD~a~~~~~~~~~--------~~~~d~~~~s~~K~~g-~~G~G~l~~~~~~~-~-~l~~~~~~~~~~~~-----~~-~ 232 (362)
T 2c0r_A 170 LIGDMSSDILSRPFD--------LNQFGLVYAGAQKNLG-PSGVTVVIVREDLV-A-ESPKHLPTMLRYDT-----YV-K 232 (362)
T ss_dssp EEEECTTTTTSSCCC--------GGGCSEEEEETTTTTC-CSSCEEEEEEGGGS-S-SCCTTSCGGGCHHH-----HH-H
T ss_pred EEEEChhhccCCccc--------hhHCcEEEEecccccc-CcCcEEEEEcHHHH-h-hccccCchHHhHHH-----Hh-h
Confidence 999999976543221 2234999999999996 77899999876522 1 11111111110000 00 0
Q ss_pred CccccCCCC-CCchHHHHHHHHhchH-HHHHHHHHHHHHHHHHHHHHhCCCCe-EEecCC---CeeEEEEEeecCCCCCC
Q 038818 343 DWQITLSRR-FRALKLWLVLRSFGVA-NLRNFLRSHVRMAQLFQELVGGDNRF-EIVAPR---NFAVVCFRVLPSASGLG 416 (486)
Q Consensus 343 ~~~~~~sr~-~~~l~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~~~-~~~~~~---~~~~v~f~~~~~~~~~~ 416 (486)
.....++-. +...++..+++.+... +++++.++..++++++.+.|++++++ ++..++ ...+++|.+..
T Consensus 233 ~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 306 (362)
T 2c0r_A 233 NNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLAS------ 306 (362)
T ss_dssp TTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSC------
T ss_pred ccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCC------
Confidence 000001111 1223444555554443 78899999999999999999998546 775432 23567776642
Q ss_pred CCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 417 DGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 417 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
+....++.+.|.++|++...+.. ..+.+|+++. ..++++|++++++.|++++++
T Consensus 307 --------~~~~~~~~~~L~~~gi~~~~g~~--~~~~iRis~~-~~~~~e~i~~l~~~l~~~~~~ 360 (362)
T 2c0r_A 307 --------EELEKEFVKASEQEGFVGLKGHR--SVGGLRASIY-NAVPYESCEALVQFMEHFKRS 360 (362)
T ss_dssp --------HHHHHHHHHHHHHTTEESCBCCT--TTCSEEEECC-TTSCHHHHHHHHHHHHHHHHH
T ss_pred --------cchHHHHHHHHHHCCCeeccCCC--CCCEEEEECC-CCCCHHHHHHHHHHHHHHHHh
Confidence 22345677778788874322211 1346999996 466788999999999998764
No 128
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.88 E-value=4.1e-22 Score=201.37 Aligned_cols=307 Identities=11% Similarity=0.053 Sum_probs=191.5
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHH---
Q 038818 110 AATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQ--- 186 (486)
Q Consensus 110 ~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~--- 186 (486)
....++..+++++++++|.+.. -+++++||+|+..++.+... +++.|+++..+|.+..
T Consensus 73 ~~~~~~~~~~~~la~~~~~~~~--------~v~~~sGs~a~~~a~~~~~~-----------~gd~v~~~~~~~~~~~~~~ 133 (420)
T 3gbx_A 73 YVDVVEQLAIDRAKELFGADYA--------NVQPHSGSQANFAVYTALLQ-----------PGDTVLGMNLAQGGHLTHG 133 (420)
T ss_dssp -CHHHHHHHHHHHHHHHTCSEE--------ECCCSSHHHHHHHHHHHHCC-----------TTCEEEEEEEC--------
T ss_pred HHHHHHHHHHHHHHHHhCCCCc--------eeEecCcHHHHHHHHHHhcC-----------CCCEEEecchhhcceeccc
Confidence 3456777788999999998653 24455668999887766543 5677888888887743
Q ss_pred HHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEee
Q 038818 187 KAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVD 266 (486)
Q Consensus 187 ~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD 266 (486)
......|.+. ..+.++.+ .++.+|+++|++++++.. +.+|+++.+++ |...|+++|+++|++||+++++|
T Consensus 134 ~~~~~~g~~~-~~~~~~~~--~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~--~~~~~l~~l~~l~~~~~~~li~D 203 (420)
T 3gbx_A 134 SPVNFSGKLY-NIVPYGID--ESGKIDYDEMAKLAKEHK-----PKMIIGGFSAY--SGVVDWAKMREIADSIGAYLFVD 203 (420)
T ss_dssp ----CHHHHS-EEEEEEEC--TTCSCCHHHHHHHHHHHC-----CSEEEECCTTC--CSCCCHHHHHHHHHHTTCEEEEE
T ss_pred hhhhhcccce-eEEeccCC--ccCCcCHHHHHHHHHhcC-----CeEEEEecCcc--CCccCHHHHHHHHHHcCCEEEEE
Confidence 2222333300 34455555 357899999999998752 33666666554 56889999999999999999999
Q ss_pred ccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCc--hHHHHHhcCCcccccCccCCCCCccCCCCc
Q 038818 267 AAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNP--NALIKALSTNPEFLRNKASDSKQVVDYKDW 344 (486)
Q Consensus 267 ~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~--~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 344 (486)
++|+.+......+.. .+..+|.++.++||++++|.| |+++.++. .... .+. .+....
T Consensus 204 e~~~~~~~~~~~~~~---~~~~~di~~~s~sK~~~g~~g-g~~~~~~~~~~~~~-~~~---~~~~~~------------- 262 (420)
T 3gbx_A 204 MAHVAGLIAAGVYPN---PVPHAHVVTTTTHKTLAGPRG-GLILAKGGDEELYK-KLN---SAVFPS------------- 262 (420)
T ss_dssp CTTTHHHHHTTSSCC---STTTSSEEEEESSGGGCSCSC-EEEEESSCCHHHHH-HHH---HHHC---------------
T ss_pred CCcchhceecccCCc---ccccCCEEEeecccCCCCCCc-eEEEEcCCcHHHHH-Hhh---hhcCCC-------------
Confidence 998655443222111 123589999999999987764 77777651 3322 211 011100
Q ss_pred cccCCCC-CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC-CCeeEEEEEeecCCCCCCCCCCcc
Q 038818 345 QITLSRR-FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP-RNFAVVCFRVLPSASGLGDGKANE 422 (486)
Q Consensus 345 ~~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~ 422 (486)
+ ..+.. ....++..++.....++++++.++..++++++.+.|.+. +++++.+ ...+++.+.+.+...
T Consensus 263 ~-~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~--------- 331 (420)
T 3gbx_A 263 A-QGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR-GYKVVSGGTENHLFLLDLVDKNL--------- 331 (420)
T ss_dssp ---CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGTC---------
T ss_pred C-CCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc-CCeeccCCCCCeEEEEEcCCCCC---------
Confidence 0 00000 111233444444445778889999999999999999884 8888753 345666666653210
Q ss_pred chHHHHHHHHHHHHhcCcEEEee------eeECCEeEEEEEecCC---CCcHHHHHHHHHHHHHHHHH
Q 038818 423 GANELNRKLLESINASGQLYVSH------GMVAGIYFIRFAVGAT---LTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 423 ~~~~~~~~l~~~l~~~g~~~~~~------~~~~~~~~lR~~~~~~---~tt~~did~~i~~l~~~~~~ 481 (486)
....+.+.+.++|+.+... ....+...+|+++... ..++++|+++++.|++++++
T Consensus 332 ----~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 395 (420)
T 3gbx_A 332 ----TGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDN 395 (420)
T ss_dssp ----CHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred ----CHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHHHHhC
Confidence 1234556666678754331 1112334599998432 24578999999999988754
No 129
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.88 E-value=2.6e-21 Score=194.41 Aligned_cols=285 Identities=14% Similarity=0.103 Sum_probs=192.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHH--
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAA-- 189 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~-- 189 (486)
.....++++.+++++|.+ ..+++++||+|+..++.+... ++..|+++...|.+....+
T Consensus 64 ~~~~~~l~~~la~~~g~~---------~~i~~~sG~~a~~~~l~~~~~-----------~gd~vl~~~~~~~~~~~~~~~ 123 (398)
T 1gc0_A 64 NPTLNLLEARMASLEGGE---------AGLALASGMGAITSTLWTLLR-----------PGDEVLLGNTLYGCTFAFLHH 123 (398)
T ss_dssp CHHHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEEESSCCSHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhc-----------CCCEEEEeCCCchhHHHHHHH
Confidence 344556667788888875 346777779999888777632 5667888999999887766
Q ss_pred --HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeec
Q 038818 190 --QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDA 267 (486)
Q Consensus 190 --~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~ 267 (486)
...|+ +++.++.+ |+++|+++|+++ +.+|+++.++|++|.+.|+++|+++|++||+++|+|+
T Consensus 124 ~~~~~g~---~~~~~~~~-------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~ 187 (398)
T 1gc0_A 124 GIGEFGV---KLRHVDMA-------DLQALEAAMTPA------TRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDN 187 (398)
T ss_dssp TGGGGTC---EEEEECTT-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEEC
T ss_pred HHHHcCC---EEEEECCC-------CHHHHHHhcCCC------CeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEEC
Confidence 55677 88888753 899999988653 4578889999999999999999999999999999999
Q ss_pred cccchhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCcc
Q 038818 268 AYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQ 345 (486)
Q Consensus 268 a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 345 (486)
+|+.+....+. . .++|.++.++||++++|.+ +|+++.+++. +...+.....++.
T Consensus 188 ~~~~~~~~~~~-~------~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~-~~~~~~~~~~~~~---------------- 243 (398)
T 1gc0_A 188 TYCTPYLQRPL-E------LGADLVVHSATKYLSGHGDITAGIVVGSQAL-VDRIRLQGLKDMT---------------- 243 (398)
T ss_dssp TTTHHHHCCGG-G------GTCSEEEEETTTTTTCSSSCCCEEEEECHHH-HHHHHHTHHHHHT----------------
T ss_pred CCcccccCCch-h------hCceEEEECCccccCCCCCCeEEEEEEChHH-HHHHHHHHhhccC----------------
Confidence 99876543321 1 2689999999999998876 5877776543 2211211111100
Q ss_pred ccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe--------------cC---CCeeEEEEEe
Q 038818 346 ITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIV--------------AP---RNFAVVCFRV 408 (486)
Q Consensus 346 ~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~--------------~~---~~~~~v~f~~ 408 (486)
+-....+.+|+.++.+ +.+..+.++..++++++.+.|++++.++-+ .+ ...++++|.+
T Consensus 244 ---~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 318 (398)
T 1gc0_A 244 ---GAVLSPHDAALLMRGI--KTLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFEL 318 (398)
T ss_dssp ---CCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEE
T ss_pred ---CCCCCHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEE
Confidence 0012345556665544 456677788888899999999887655421 11 1357788876
Q ss_pred ecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEe------------eee------------ECC--EeEEEEEecCCC
Q 038818 409 LPSASGLGDGKANEGANELNRKLLESINASGQLYVS------------HGM------------VAG--IYFIRFAVGATL 462 (486)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~------------~~~------------~~~--~~~lR~~~~~~~ 462 (486)
.+. .+ ...+.+.+.++.... +.. ..| .+.+|+++. ..
T Consensus 319 ~~~-------------~~---~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g-~~ 381 (398)
T 1gc0_A 319 KGG-------------IG---AGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVG-LE 381 (398)
T ss_dssp TTH-------------HH---HHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECC-SS
T ss_pred CCC-------------HH---HHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeC-cC
Confidence 431 11 223333344443221 100 011 368999995 57
Q ss_pred CcHHHHHHHHHHHHHH
Q 038818 463 TEDRHVIAAWKVVQEK 478 (486)
Q Consensus 463 tt~~did~~i~~l~~~ 478 (486)
+++++|+.+.++|+++
T Consensus 382 ~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 382 DIDDLLADVQQALKAS 397 (398)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhc
Confidence 7888999999998865
No 130
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.88 E-value=1.3e-22 Score=200.87 Aligned_cols=331 Identities=13% Similarity=0.043 Sum_probs=206.9
Q ss_pred CHHHHHHHHHHhhcCC----Ccccccc---ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCc-hHHHHHHHHH
Q 038818 85 SIAGFLGEMLSSGFNV----VGFNWMS---SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTT-CEAILCTLAA 156 (486)
Q Consensus 85 ~~~~~~~~~l~~~~n~----~~~~~~~---~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~gg-t~a~~~al~~ 156 (486)
.+|..+.+.+...+.. +...|.. ++....+..++++++++++|.++. ..+++|+|+ |+|+..++..
T Consensus 13 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~------~~v~~~~g~gt~al~~~~~~ 86 (360)
T 1w23_A 13 ALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPND------YQILFLQGGASLQFTMLPMN 86 (360)
T ss_dssp CCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTT------EEEEEESSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC------ceEEEECCcchHHHHHHHHH
Confidence 3344455555555432 2223333 566677788899999999999632 167889888 8988776655
Q ss_pred HHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHH-HHHHHHHCCCccEEEE
Q 038818 157 ARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQA-AIDLDIQAGLIPLFLC 235 (486)
Q Consensus 157 a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~-~l~~~~~~g~~p~~vv 235 (486)
.... +.++++|+++..+|++... ++.. | +++.+|++++ ++.+|+++|++ ++++. +.+|+
T Consensus 87 l~~~--------~~~g~~vi~~~~~~~~~~~-~~~~--g--~~~~v~~~~~-~~~~d~~~l~~~~i~~~------~k~v~ 146 (360)
T 1w23_A 87 LLTK--------GTIGNYVLTGSWSEKALKE-AKLL--G--ETHIAASTKA-NSYQSIPDFSEFQLNEN------DAYLH 146 (360)
T ss_dssp HCCT--------TCEEEEEECSHHHHHHHHH-HHTT--S--EEEEEEECGG-GTSCSCCCGGGCCCCTT------EEEEE
T ss_pred hcCC--------CCcccEEEecchhHHHHHH-HHHh--C--CeEEeecccc-cCcCCccchHhhccCCC------CCEEE
Confidence 4321 1135678888778877433 3433 3 5888888742 34689999988 77432 45788
Q ss_pred eecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCch
Q 038818 236 ATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPN 315 (486)
Q Consensus 236 ~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~ 315 (486)
+++++|++|.+-| +|+++||+++++|++|+.+....+ +...|.++.++||+++ |.|+|+++++++.
T Consensus 147 ~~~~~nptG~~~~-----~i~~~~~~~li~D~a~~~~~~~~~--------~~~~di~~~s~sK~~~-~~G~G~~~~~~~~ 212 (360)
T 1w23_A 147 ITSNNTIYGTQYQ-----NFPEINHAPLIADMSSDILSRPLK--------VNQFGMIYAGAQKNLG-PSGVTVVIVKKDL 212 (360)
T ss_dssp EESEETTTTEECS-----SCCCCCSSCEEEECTTTTTSSCCC--------GGGCSEEEEETTTTTS-CTTCEEEEEEHHH
T ss_pred EeCCCCCcceecc-----cccccCCceEEEechhhcCCCCcC--------cccCCEEEEEcccccC-CCCcEEEEEcHHH
Confidence 8999999999855 233389999999999976543221 1123899999999887 6689999987542
Q ss_pred HHHHHhcC-CcccccCccCCCCCccCCCCccccCCCC-CCchHHHHHHHHhchH-HHHHHHHHHHHHHHHHHHHHhCCCC
Q 038818 316 ALIKALST-NPEFLRNKASDSKQVVDYKDWQITLSRR-FRALKLWLVLRSFGVA-NLRNFLRSHVRMAQLFQELVGGDNR 392 (486)
Q Consensus 316 ~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~~ 392 (486)
.. .+.. .+.++..... .. ..... .+.. ....++..++..+... +++++.++..++++++.+.|+++++
T Consensus 213 -~~-~~~~~~~~~~~~~~~-----~~-~~~~~-~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 283 (360)
T 1w23_A 213 -LN-TKVEQVPTMLQYATH-----IK-SDSLY-NTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNG 283 (360)
T ss_dssp -HC-SCCTTCCGGGCHHHH-----HH-TTTCS-SCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred -Hh-hcccCCcchhhhhhh-----hh-ccCCC-CCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccC
Confidence 21 1111 1111100000 00 00000 0101 1112344455544444 7888999999999999999999876
Q ss_pred e-EEecCC--Cee-EEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHH
Q 038818 393 F-EIVAPR--NFA-VVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHV 468 (486)
Q Consensus 393 ~-~~~~~~--~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~di 468 (486)
+ ....++ ..+ +++|.+.. .....++.+.|.+.|+.+..+.. ...++|+++. ..++++++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~l~~~gi~~~~~~~--~~~~iRis~~-~~~~~~~i 346 (360)
T 1w23_A 284 FYVGHAEKGSRSLMNVTFNLRN--------------EELNQQFLAKAKEQGFVGLNGHR--SVGGCRASIY-NAVPIDAC 346 (360)
T ss_dssp SSEESSCGGGBCSSEEEEECSS--------------HHHHHHHHHHHHHTTEESCBCCT--TTCSEEEECC-TTSCHHHH
T ss_pred cccccCCchhccCcEEEEEcCC--------------CccHHHHHHHHHHCCeeeecCCC--CCCeEEEEec-CCCCHHHH
Confidence 5 654222 234 67776642 12234677777778875422211 2457999995 56688899
Q ss_pred HHHHHHHHHHHHH
Q 038818 469 IAAWKVVQEKLDG 481 (486)
Q Consensus 469 d~~i~~l~~~~~~ 481 (486)
+++++.|++++++
T Consensus 347 ~~~~~~l~~~~~~ 359 (360)
T 1w23_A 347 IALRELMIQFKEN 359 (360)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 9999999988654
No 131
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.88 E-value=3.9e-21 Score=195.07 Aligned_cols=315 Identities=10% Similarity=0.041 Sum_probs=208.6
Q ss_pred cccccChhhHHHHHHHHHHHHHHc-CCCCCCccCCCcc---eEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEec
Q 038818 103 FNWMSSPAATELENIVMDWLGEML-KLPKSFLFSGTGG---GVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGS 178 (486)
Q Consensus 103 ~~~~~~~~~~~le~~~~~~l~~l~-g~~~~~~~~~~~~---~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s 178 (486)
..|.......++++.+.+++.+.. +.+++ . .++|+||++|+..++.+... +++.|+++
T Consensus 82 ~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-------~~~~i~~t~g~~~al~~~~~~l~~-----------~gd~Vl~~ 143 (430)
T 2x5f_A 82 FPYAPPQGIEELRDLWQQKMLRDNPELSID-------NMSRPIVTNALTHGLSLVGDLFVN-----------QDDTILLP 143 (430)
T ss_dssp SSCCCTTCCHHHHHHHHHHHHHHCTTCCGG-------GBCCCEEESHHHHHHHHHHHHHCC-----------TTCEEEEE
T ss_pred cccCCCCCCHHHHHHHHHHHhccCcccCCC-------ccceEEEcCCchHHHHHHHHHHhC-----------CCCEEEEc
Confidence 344444456788888888887663 33333 5 89999999999888776543 56778888
Q ss_pred CCCchHHHHHHHH-cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHH
Q 038818 179 DQTHSALQKAAQI-AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCD 254 (486)
Q Consensus 179 ~~~H~s~~~a~~~-~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~ 254 (486)
..+|.++...++. .|. +++.+|+++. ++.+|+++|++++++. +..+.+|+++.++|++|.+-| +++|++
T Consensus 144 ~p~y~~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~ 216 (430)
T 2x5f_A 144 EHNWGNYKLVFNTRNGA---NLQTYPIFDK-DGHYTTDSLVEALQSY---NKDKVIMILNYPNNPTGYTPTHKEVTTIVE 216 (430)
T ss_dssp SSCCTHHHHHHTTTTCC---EEEEECCBCT-TSCBCSHHHHHHHHHC---CSSEEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred CCcCccHHHHHHHhcCC---eEEEEeccCc-cCCcCHHHHHHHHHhc---CCCCEEEEEcCCCCCCCCcCCHHHHHHHHH
Confidence 8999999999998 899 9999998753 3689999999999752 123457788889999999988 899999
Q ss_pred HHHH-----hCceEEeeccccchhccCccchh---hhcCCCCC---CceeeccccccCCC-CcceEEEe--eCchHHHHH
Q 038818 255 IAKR-----YSIWVHVDAAYAGSACICPEFRH---FIDGIEGA---DSFSLNAHKWFFTT-LDCCCLWV--KNPNALIKA 320 (486)
Q Consensus 255 i~~~-----~g~~lhvD~a~g~~~~~~~~~~~---~~~~~~~a---Dsi~~~~hK~l~~p-~~~g~~~~--~~~~~~~~~ 320 (486)
+|++ ||+++++|++|+.+......... .+.+.... +.+..++||+++.| ..+|++++ +++......
T Consensus 217 ~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l 296 (430)
T 2x5f_A 217 AIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVL 296 (430)
T ss_dssp HHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHHHHH
T ss_pred HHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHHHHHH
Confidence 9999 99999999999865432211111 12222233 56678899999744 34788888 244333221
Q ss_pred hcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhc-h----HHHHHHHHHHHHHHHHHHHHHh----CCC
Q 038818 321 LSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFG-V----ANLRNFLRSHVRMAQLFQELVG----GDN 391 (486)
Q Consensus 321 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g-~----~g~~~~~~~~~~~a~~l~~~L~----~~~ 391 (486)
.......... .+.....+..+++...+. . +.++++.++..++++++.+.|+ +.
T Consensus 297 ~~~~~~~~~~-----------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~- 358 (430)
T 2x5f_A 297 EAKVKGLIRS-----------------NISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHS- 358 (430)
T ss_dssp HHHHHHHHHT-----------------TTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTT-
T ss_pred HHHHhhhhhc-----------------ccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-
Confidence 1110000000 000123333444444332 1 2233377778888999999998 55
Q ss_pred CeEEecCCCeeE-EEEEeecCCCCCCCCCCccchHHHHHHHHHHHHh-cCcEEEeeeeECCEeEEEEEecCCCCcHHHHH
Q 038818 392 RFEIVAPRNFAV-VCFRVLPSASGLGDGKANEGANELNRKLLESINA-SGQLYVSHGMVAGIYFIRFAVGATLTEDRHVI 469 (486)
Q Consensus 392 ~~~~~~~~~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did 469 (486)
++++.. +..++ +.+.+.+. + ..++.+.|.+ .|+.+ .+. +.+++|++++. +++++|+
T Consensus 359 g~~~~~-~~~g~~~~~~~~~~-------------~--~~~~~~~l~~~~gi~v-~~g---~~~~iRis~~~--~~~e~i~ 416 (430)
T 2x5f_A 359 HWQAYD-FNSGYFMAIKVHDV-------------D--PEALRKHLIDKYSIGV-IAL---NATDIRIAFSC--VEKDDIP 416 (430)
T ss_dssp TEEECC-CCBSSEEEEEESSS-------------C--HHHHHHHHHHHHCEEC-EEC---SSSEEEEEGGG--SCGGGHH
T ss_pred CceeeC-CCceEEEEeCCCCC-------------C--HHHHHHHHHHhCCEEE-ecC---CCCeEEEEEec--CCHHHHH
Confidence 787754 44444 55555411 1 2356666766 78754 332 45689999963 4777999
Q ss_pred HHHHHHHHHHHHH
Q 038818 470 AAWKVVQEKLDGI 482 (486)
Q Consensus 470 ~~i~~l~~~~~~l 482 (486)
++++.|+++++++
T Consensus 417 ~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 417 HVFDSIAKAIDDL 429 (430)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 9999999988765
No 132
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.88 E-value=5.8e-21 Score=189.39 Aligned_cols=292 Identities=13% Similarity=0.060 Sum_probs=192.6
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDP 196 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~ 196 (486)
++++.+++++|.+.+ ..++|+||++++..++.+. . + ..|++...+|.++...++..|.
T Consensus 63 ~l~~~la~~~~~~~~-------~v~~~~g~~~al~~~~~~~--~----------g-d~vl~~~p~y~~~~~~~~~~g~-- 120 (364)
T 1lc5_A 63 HLHQALARHHQVPAS-------WILAGNGETESIFTVASGL--K----------P-RRAMIVTPGFAEYGRALAQSGC-- 120 (364)
T ss_dssp HHHHHHHHHHTSCGG-------GEEEESSHHHHHHHHHHHH--C----------C-SEEEEEESCCTHHHHHHHHTTC--
T ss_pred HHHHHHHHHHCcCHH-------HEEECCCHHHHHHHHHHHc--C----------C-CeEEEeCCCcHHHHHHHHHcCC--
Confidence 344566677787654 6899999999998777665 2 3 4577777899999999999999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHHHhCceEEeeccccchh
Q 038818 197 KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAKRYSIWVHVDAAYAGSA 273 (486)
Q Consensus 197 ~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~~~g~~lhvD~a~g~~~ 273 (486)
+++.+|.++.+.+.+ ++++.+.+.+ .+.+|+++.++|++|.+-| +++|+++|++||+++++|++|+.+.
T Consensus 121 -~~~~v~~~~~~~~~~-l~~~~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 192 (364)
T 1lc5_A 121 -EIRRWSLREADGWQL-TDAILEALTP------DLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFI 192 (364)
T ss_dssp -EEEEEECCGGGTTCC-CTTHHHHCCT------TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGS
T ss_pred -eEEEEeCCcccccch-hHHHHHhccC------CCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhc
Confidence 999999874222332 3434333321 2346777889999999988 8999999999999999999997654
Q ss_pred ccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCC
Q 038818 274 CICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRF 352 (486)
Q Consensus 274 ~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~ 352 (486)
.........+ +....|.+..++||+++.| ..+|++++.+++........... + ..
T Consensus 193 ~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~-----------------~------~~ 248 (364)
T 1lc5_A 193 PHETGFIPAL-KDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQMP-----------------W------SV 248 (364)
T ss_dssp TTCCCSGGGC-TTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHHSCT-----------------T------CS
T ss_pred cCccchhhHh-ccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHHHHhCCC-----------------C------CC
Confidence 3111111111 1124677888999999844 45788883444443322111000 0 12
Q ss_pred CchHHHHHHHHhch-HHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHH
Q 038818 353 RALKLWLVLRSFGV-ANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKL 431 (486)
Q Consensus 353 ~~l~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l 431 (486)
..+..+++...+.. +.+++..++..++++++.+.|+++|++++. ++..+.+.+.+... ..++
T Consensus 249 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~g~~~~~~~~~~----------------~~~l 311 (364)
T 1lc5_A 249 NALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVY-PGRANYLLLRCERE----------------DIDL 311 (364)
T ss_dssp CHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEC-CCSSSEEEEEESCT----------------TCCH
T ss_pred CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCEEC-CCCCeEEEEECCCc----------------HHHH
Confidence 34455555555433 457778888889999999999998899875 45556666665421 1245
Q ss_pred HHHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 432 LESINASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 432 ~~~l~~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
.+.|.++|+.+..+..+. +..++|+++. +++|+++++++|+++++++.
T Consensus 312 ~~~l~~~gi~v~~g~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~~~~~~ 361 (364)
T 1lc5_A 312 QRRLLTQRILIRSCANYPGLDSRYYRVAIR----SAAQNERLLAALRNVLTGIA 361 (364)
T ss_dssp HHHHHTTTEECEECTTSTTCCTTEEEEECC----CHHHHHHHHHHHHHHC----
T ss_pred HHHHHHCCcEEeeCcccCCCCCCEEEEEeC----CHHHHHHHHHHHHHHhhccc
Confidence 666777787543333222 2568999974 47799999999999877653
No 133
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.88 E-value=6.2e-21 Score=188.70 Aligned_cols=284 Identities=10% Similarity=0.079 Sum_probs=193.4
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCC-eEEEecCCCchHHHHHHHHcCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISR-LVVYGSDQTHSALQKAAQIAGID 195 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~a~~~~G~g 195 (486)
++++.+++++|.+.+ ..++|+|+++++..++.+... ++ +.|+++..+|.++..+++..|.
T Consensus 62 ~lr~~la~~~~~~~~-------~v~~~~G~~~ai~~~~~~~~~-----------~g~d~Vl~~~p~~~~~~~~~~~~g~- 122 (356)
T 1fg7_A 62 AVIENYAQYAGVKPE-------QVLVSRGADEGIELLIRAFCE-----------PGKDAILYCPPTYGMYSVSAETIGV- 122 (356)
T ss_dssp HHHHHHHHHHTSCGG-------GEEEESHHHHHHHHHHHHHCC-----------TTTCEEEECSSSCTHHHHHHHHHTC-
T ss_pred HHHHHHHHHhCCChH-------HEEEcCCHHHHHHHHHHHHhC-----------CCCCEEEEeCCChHHHHHHHHHcCC-
Confidence 455667777788754 689999999999877776542 45 6788899999999999999999
Q ss_pred CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHH---HHHHHHhCceEEeeccccch
Q 038818 196 PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPL---CDIAKRYSIWVHVDAAYAGS 272 (486)
Q Consensus 196 ~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I---~~i~~~~g~~lhvD~a~g~~ 272 (486)
+++.+|.++ ++.+|+++|+++++ . +.+|+++.++|++|.+-|.++| +++|+ +|+++++|++|+.+
T Consensus 123 --~~~~v~~~~--~~~~d~~~l~~~i~-~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~ 190 (356)
T 1fg7_A 123 --ECRTVPTLD--NWQLDLQGISDKLD-G------VKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEF 190 (356)
T ss_dssp --EEEECCCCT--TSCCCHHHHHTSCT-T------EEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGG
T ss_pred --EEEEeeCCC--CCCCCHHHHHHHhc-C------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhh
Confidence 999999874 57899999998875 2 4578888999999999776555 45555 89999999999865
Q ss_pred hccCccchhhhcCCCCCCceeeccccccCC-CCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCC
Q 038818 273 ACICPEFRHFIDGIEGADSFSLNAHKWFFT-TLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRR 351 (486)
Q Consensus 273 ~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~ 351 (486)
.. ......... ....+.+..+++|+++. ...+|+++++ ++...........| .
T Consensus 191 ~~-~~~~~~~~~-~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~l~~~~~~~-----------------------~ 244 (356)
T 1fg7_A 191 CP-QASLAGWLA-EYPHLAILRTLSKAFALAGLRCGFTLAN-EEVINLLMKVIAPY-----------------------P 244 (356)
T ss_dssp SG-GGCSGGGTT-TCTTEEEEEESSSTTCCGGGCCEEEEEC-HHHHHHHHHHSCSS-----------------------C
T ss_pred cC-CCcHHHHHh-hCCCEEEEecchHhhcCchhhhEEEEeC-HHHHHHHHHhcCCC-----------------------C
Confidence 41 111111111 11346778899999974 3457888874 33332211111100 1
Q ss_pred CCchHHHHHHHHhchHH---HHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHH
Q 038818 352 FRALKLWLVLRSFGVAN---LRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELN 428 (486)
Q Consensus 352 ~~~l~~~~~l~~~g~~g---~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~ 428 (486)
...+..+++...+...+ +++..++..++++++.+.|++++++....++..+.+.+++. . .
T Consensus 245 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~-~----------------~ 307 (356)
T 1fg7_A 245 LSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK-A----------------S 307 (356)
T ss_dssp SCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET-T----------------H
T ss_pred CCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECC-C----------------H
Confidence 23445555666665444 67788888899999999999887653444555566666653 1 2
Q ss_pred HHHHHHHHhcCcEEEeeeeECC-EeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 429 RKLLESINASGQLYVSHGMVAG-IYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 429 ~~l~~~l~~~g~~~~~~~~~~~-~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
.++.+.|.++|+.+.......+ .+++|+++. +++|+++++++|+++
T Consensus 308 ~~l~~~L~~~gI~v~~~g~~~~~~~~iRis~~----~~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 308 SAVFKSLWDQGIILRDQNKQPSLSGCLRITVG----TREESQRVIDALRAE 354 (356)
T ss_dssp HHHHHHHHHTTEECEECTTSTTCTTEEEEECC----CHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCEEEEECCCCCCCCCeEEEEeC----CHHHHHHHHHHHHhh
Confidence 3566677777875433122222 358999984 467999999998753
No 134
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.88 E-value=2.6e-21 Score=195.73 Aligned_cols=307 Identities=11% Similarity=0.086 Sum_probs=190.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH-HHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA-LQKAAQ 190 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-~~~a~~ 190 (486)
..++...++++++++|.+.. .++++|||+|+..++.++.. +++.|+++..+|.+ +...+.
T Consensus 77 ~~~~~~a~~~~~~~~~~~~~--------~v~~~~Gs~a~~~al~~~~~-----------~gd~Vi~~~~~~~~~~~~~~~ 137 (425)
T 3ecd_A 77 DEVEALAIERVKRLFNAGHA--------NVQPHSGAQANGAVMLALAK-----------PGDTVLGMSLDAGGHLTHGAK 137 (425)
T ss_dssp CHHHHHHHHHHHHHHTCSEE--------ECCCSSHHHHHHHHHHHHCC-----------TTCEEEEECC-----------
T ss_pred HHHHHHHHHHHHHHhCCCCc--------eeecCchHHHHHHHHHHccC-----------CCCEEEEcccccccceecchh
Confidence 35566666889999997642 35688999999888776632 56778888899987 323332
Q ss_pred --HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeecc
Q 038818 191 --IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAA 268 (486)
Q Consensus 191 --~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a 268 (486)
..|.+. .++.+++++ +++.+|+++|++++++.. +.+|+++.+++ |...++++|.++|++||+++|+|++
T Consensus 138 ~~~~g~~~-~~~~~~~~~-~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~--~~~~~l~~i~~l~~~~~~~li~De~ 208 (425)
T 3ecd_A 138 PALSGKWF-NALQYGVSR-DTMLIDYDQVEALAQQHK-----PSLIIAGFSAY--PRKLDFARFRAIADSVGAKLMVDMA 208 (425)
T ss_dssp -------C-EEEEECCCT-TTSSCCHHHHHHHHHHHC-----CSEEEEECSCC--CSCCCHHHHHHHHHHHTCEEEEECG
T ss_pred hhhcccce-eeeecCCCc-ccCccCHHHHHHHHhhcC-----CcEEEEccccC--CCcCCHHHHHHHHHHcCCEEEEECc
Confidence 444411 334555553 357999999999997532 33566665444 7889999999999999999999999
Q ss_pred ccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccC
Q 038818 269 YAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITL 348 (486)
Q Consensus 269 ~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 348 (486)
|+.+.......... +..+|.++.++||++.+|. +|+++.+++........ +.... ...
T Consensus 209 ~~~g~~~~~~~~~~---~~~~di~~~s~sK~l~g~~-~g~~~~~~~~~~~~~~~----~~~~~--------------~~~ 266 (425)
T 3ecd_A 209 HIAGVIAAGRHANP---VEHAHVVTSTTHKTLRGPR-GGFVLTNDEEIAKKINS----AVFPG--------------LQG 266 (425)
T ss_dssp GGHHHHHTTSSCCG---GGTCSEEEEESSGGGCCCS-CEEEEESCHHHHHHHHH----HHC-------------------
T ss_pred ChHhhhhcccccCc---hhcCcEEEecCCcccCCCC-cEEEEeCCHHHHHHHHh----hhCcc--------------ccC
Confidence 76655433222211 2347999999999997775 57777775544321111 11000 000
Q ss_pred CCC-CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC-CCeeEEEEEeecCCCCCCCCCCccchHH
Q 038818 349 SRR-FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP-RNFAVVCFRVLPSASGLGDGKANEGANE 426 (486)
Q Consensus 349 sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~ 426 (486)
+.. ....++..++.....+++.++.++..++++++.+.|.+. ++++..+ ...+++.+.+.+...
T Consensus 267 ~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~------------- 332 (425)
T 3ecd_A 267 GPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG-GVDLVTGGTDNHLLLVDLRPKGL------------- 332 (425)
T ss_dssp CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGTC-------------
T ss_pred CccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCCceEEEEEeCCCCC-------------
Confidence 000 112334444544455778889999999999999999885 7888754 345666666653210
Q ss_pred HHHHHHHHHHhcCcEEEeee------eECCEeEEEEEec---CCCCcHHHHHHHHHHHHHHHHHH
Q 038818 427 LNRKLLESINASGQLYVSHG------MVAGIYFIRFAVG---ATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 427 ~~~~l~~~l~~~g~~~~~~~------~~~~~~~lR~~~~---~~~tt~~did~~i~~l~~~~~~l 482 (486)
....+.+.+.++|+.+.... .......+|+++. ....++++|+++++.|++++++.
T Consensus 333 ~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 333 KGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp CHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHhcc
Confidence 12345666667787543211 0112357999853 22335889999999999988765
No 135
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.88 E-value=1.5e-20 Score=188.19 Aligned_cols=317 Identities=10% Similarity=0.041 Sum_probs=194.2
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHH
Q 038818 106 MSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSAL 185 (486)
Q Consensus 106 ~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 185 (486)
..++...++| +.+++++|.+ ..+++++||+|+..++.+++... ..+ -.++..|+++..+|.++
T Consensus 31 ~~~~~~~~l~----~~la~~~~~~---------~~i~~~sGt~a~~~al~~~~~~~--~~~--~~~g~~Vi~~~~~~~~~ 93 (390)
T 3b8x_A 31 TMGEYVKQYE----TQFAKTFGSK---------YAVMVSSGSTANLLMIAALFFTK--KPR--LKKGDEIIVPAVSWSTT 93 (390)
T ss_dssp SSCHHHHHHH----HHHHHHHTCS---------EEEEESCHHHHHHHHHHHTTSSS--SCS--CCTTCEEEEESSSCHHH
T ss_pred CCChHHHHHH----HHHHHHHCCC---------cEEEECCHHHHHHHHHHHHHhhh--hcC--CCCcCEEEECCCCcHHH
Confidence 3344444444 5567777764 36889999999988887763100 000 01567888999999999
Q ss_pred HHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEe
Q 038818 186 QKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHV 265 (486)
Q Consensus 186 ~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhv 265 (486)
..+++..|+ +++.+|++++ ++.+|+++|+++|++. +.+|+++ +++|...|+++|.++|++||+++|+
T Consensus 94 ~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~------~~~v~~~---~~~g~~~~~~~i~~l~~~~~~~li~ 160 (390)
T 3b8x_A 94 YYPLQQYGL---RVKFVDIDIN-TLNIDIESLKEAVTDS------TKAILTV---NLLGNPNNFDEINKIIGGRDIILLE 160 (390)
T ss_dssp HHHHHHTTC---EEEEECBCTT-TCSBCHHHHHHHCCTT------EEEEEEE---CGGGCCCCHHHHHHHHTTSCCEEEE
T ss_pred HHHHHHcCC---EEEEEecCcc-ccCcCHHHHHHHhCcC------CeEEEEE---CCccChhhHHHHHHHHHHcCCEEEE
Confidence 999999999 9999999863 4799999999998653 3355555 3678899999999999999999999
Q ss_pred eccccchhccCccchhhhcCCCCCCcee--eccccccCCCCcceEEEeeCchHHHHH--hcCCcccccCc--------cC
Q 038818 266 DAAYAGSACICPEFRHFIDGIEGADSFS--LNAHKWFFTTLDCCCLWVKNPNALIKA--LSTNPEFLRNK--------AS 333 (486)
Q Consensus 266 D~a~g~~~~~~~~~~~~~~~~~~aDsi~--~~~hK~l~~p~~~g~~~~~~~~~~~~~--~~~~~~y~~~~--------~~ 333 (486)
|+||+.+..... +.. +. ..|..+ ..++|.+.+|.| |+++++++...... +... ++..+. ..
T Consensus 161 D~a~~~g~~~~~--~~~--g~-~~~~~~~s~~~~k~~~~g~g-G~~~~~~~~l~~~~~~~~~~-g~~~~~~~~~~~~~~~ 233 (390)
T 3b8x_A 161 DNCESMGATFNN--KCA--GT-FGLMGTFSSFYSNHIATMEG-GCIVTDDEEIYHILLCIRAH-GWTRNLPKKNKVTGVK 233 (390)
T ss_dssp ECTTCTTCEETT--EET--TS-SSSEEEEECCTTSSSCSSSC-EEEEESCHHHHHHHHHHTBT-TBSTTSCSEETTTEEC
T ss_pred ECcCcccCEECC--ccc--cc-ccceEEEEccCCCCCccCCc-eEEEeCCHHHHHHHHHHHhc-CCCccccccccccccc
Confidence 999985544321 111 11 124334 333444555554 77777765432211 1111 100000 00
Q ss_pred CCCCccCCCCccccCCCC--CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC-CeeE--EEEEe
Q 038818 334 DSKQVVDYKDWQITLSRR--FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR-NFAV--VCFRV 408 (486)
Q Consensus 334 ~~~~~~~~~~~~~~~sr~--~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~~~--v~f~~ 408 (486)
..........+. ..+.+ ...+.+++++..+ +.+++..++..++++++.+.|+++|++++..++ ..+. +.+.+
T Consensus 234 ~~~~~~~~~~~~-~~g~~~~~~~~~aa~~l~~l--~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~ 310 (390)
T 3b8x_A 234 SDDQFEESFKFV-LPGYNVRPLEMSGAIGIEQL--KKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSWFGFSFII 310 (390)
T ss_dssp CSCTTTSSSCBC-SCCCBCCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCCCEEEEEE
T ss_pred ccccccccccee-ccccccCcCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcccEEEEEEe
Confidence 000000000000 11222 3445566665543 778889999999999999999999899886542 2333 34444
Q ss_pred ecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEe---ee-----e-EC--C--------------EeEEEEEecCCCC
Q 038818 409 LPSASGLGDGKANEGANELNRKLLESINASGQLYVS---HG-----M-VA--G--------------IYFIRFAVGATLT 463 (486)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~~-----~-~~--~--------------~~~lR~~~~~~~t 463 (486)
.+.. .. ...++.+.|.++|+..-. +. . +. + ...+|+++ ++.+
T Consensus 311 ~~~~--------~~----~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~-~~~~ 377 (390)
T 3b8x_A 311 KKDS--------GV----IRKQLVENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGN-HQIE 377 (390)
T ss_dssp CTTS--------CC----CHHHHHHHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEEC-CSSC
T ss_pred cCcC--------cc----cHHHHHHHHHHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeC-CCCC
Confidence 4210 00 123566677777874221 11 0 00 0 13699998 6899
Q ss_pred cHHHHHHHHHHH
Q 038818 464 EDRHVIAAWKVV 475 (486)
Q Consensus 464 t~~did~~i~~l 475 (486)
|++|||+++++|
T Consensus 378 t~~di~~i~~~l 389 (390)
T 3b8x_A 378 LFDEIDYLREVL 389 (390)
T ss_dssp CHHHHHHHHHHT
T ss_pred CHHHHHHHHHhh
Confidence 999999999876
No 136
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.88 E-value=2.9e-21 Score=195.70 Aligned_cols=286 Identities=13% Similarity=0.097 Sum_probs=192.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHH---
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKA--- 188 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a--- 188 (486)
.....++++++++++|.+ ..+++++|++|+..++.+... +++.|+++...|.+....
T Consensus 113 ~~~~~~l~~~lA~l~g~~---------~~v~~~sG~~Ai~~al~~l~~-----------~Gd~Vi~~~~~y~~~~~~~~~ 172 (445)
T 1qgn_A 113 NPTTVVLEEKISALEGAE---------STLLMASGMCASTVMLLALVP-----------AGGHIVTTTDCYRKTRIFIET 172 (445)
T ss_dssp CHHHHHHHHHHHHHHTCS---------EEEEESCHHHHHHHHHHHHSC-----------SSCEEEEETTSCHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhCCC---------cEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchhHHHHHHH
Confidence 344455667788888875 246666677898877775432 566788888888876664
Q ss_pred -HHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeec
Q 038818 189 -AQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDA 267 (486)
Q Consensus 189 -~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~ 267 (486)
++..|+ +++.+|.+ |+++|+++|++++ +.+|+++.++|++|.+.|+++|+++|+++|+++|+|+
T Consensus 173 ~~~~~G~---~v~~v~~~-------d~~~l~~ai~~~t-----v~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~ 237 (445)
T 1qgn_A 173 ILPKMGI---TATVIDPA-------DVGALELALNQKK-----VNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDG 237 (445)
T ss_dssp TGGGGTC---EEEEECSS-------CHHHHHHHHHHSC-----EEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHcCC---EEEEeCCC-------CHHHHHHHhccCC-----CCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEEC
Confidence 455688 88888753 8999999998643 2478899999999999999999999999999999999
Q ss_pred cccchhccCccchhhhcCCCCCCceeeccccccCCCC--cceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCcc
Q 038818 268 AYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL--DCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQ 345 (486)
Q Consensus 268 a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~--~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 345 (486)
+|+.+....+ . . .++|.++.++||+++++. .+|+++.+++ .+..... +...
T Consensus 238 a~~~~~~~~~-~-----~-~g~Div~~S~sK~~gg~gd~~~G~l~~~~~-l~~~l~~----~~~~--------------- 290 (445)
T 1qgn_A 238 TFATPLNQKA-L-----A-LGADLVLHSATKFLGGHNDVLAGCISGPLK-LVSEIRN----LHHI--------------- 290 (445)
T ss_dssp TTTCTTTCCT-T-----T-TTCSEEEECTTTTTTCSSSCCCEEEEECHH-HHHHHHH----HHHH---------------
T ss_pred CCcccccCCc-c-----c-cCCEEEEECCcccccccccceEEEEEECHH-HHHHHHH----HHHH---------------
Confidence 9976543222 1 1 268999999999998653 2788777653 3222110 0000
Q ss_pred ccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCe-EEecCC----------------CeeEEEEEe
Q 038818 346 ITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRF-EIVAPR----------------NFAVVCFRV 408 (486)
Q Consensus 346 ~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~-~~~~~~----------------~~~~v~f~~ 408 (486)
.+-....+..|..++ +.+.+..++++..++++++.+.|+++|++ ++..+. ..++++|.+
T Consensus 291 --~g~~~~~~~a~~~~~--~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l 366 (445)
T 1qgn_A 291 --LGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEV 366 (445)
T ss_dssp --HCCCCCHHHHHHHHH--HGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEE
T ss_pred --hCCCCCHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEE
Confidence 000123345566555 34666777888888899999999999988 454431 367899988
Q ss_pred ecCCCCCCCCCCccchHHHHHHHHHHHHhcCc------E---EEeeee------------ECC--EeEEEEEecCCCCcH
Q 038818 409 LPSASGLGDGKANEGANELNRKLLESINASGQ------L---YVSHGM------------VAG--IYFIRFAVGATLTED 465 (486)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~------~---~~~~~~------------~~~--~~~lR~~~~~~~tt~ 465 (486)
.+. .+...++.+.+...++ . ...+.. ..| .+.+|+|++ .
T Consensus 367 ~~~-------------~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG-----~ 428 (445)
T 1qgn_A 367 DGD-------------LLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG-----V 428 (445)
T ss_dssp SSC-------------HHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC-----S
T ss_pred CCC-------------HHHHHHHHHhCCCceEeccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEec-----c
Confidence 642 2223455555431111 1 111100 012 368999995 3
Q ss_pred HHHHHHHHHHHHHHHH
Q 038818 466 RHVIAAWKVVQEKLDG 481 (486)
Q Consensus 466 ~did~~i~~l~~~~~~ 481 (486)
||+|.+++.|+++++.
T Consensus 429 Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 429 EDFDDLKADILQALDS 444 (445)
T ss_dssp SCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhh
Confidence 4899999999998764
No 137
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.88 E-value=3.1e-21 Score=191.09 Aligned_cols=284 Identities=12% Similarity=0.099 Sum_probs=193.1
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDP 196 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~ 196 (486)
++++++++++|.+.+ ..++|+|||+|+..++.+... +++.|+++..+|.++...++..|.
T Consensus 69 ~lr~~la~~~g~~~~-------~i~~t~g~~~al~~~~~~l~~-----------~gd~Vl~~~p~~~~~~~~~~~~g~-- 128 (360)
T 3hdo_A 69 KLREVAGELYGFDPS-------WIIMANGSDEVLNNLIRAFAA-----------EGEEIGYVHPSYSYYGTLAEVQGA-- 128 (360)
T ss_dssp HHHHHHHHHHTCCGG-------GEEEESSHHHHHHHHHHHHCC-----------TTCEEEEESSSCTHHHHHHHHHTC--
T ss_pred HHHHHHHHHhCcCcc-------eEEEcCCHHHHHHHHHHHHhC-----------CCCEEEEcCCChHHHHHHHHHCCC--
Confidence 455677778887654 789999999999888776533 567788899999999999999999
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccC
Q 038818 197 KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACIC 276 (486)
Q Consensus 197 ~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~ 276 (486)
+++.+|+++ ++.+ +++++.+ .+.+|+++.++|++|.+.|+++|.++|+++|+++++|++|+.+.. .
T Consensus 129 -~~~~v~~~~--~~~~--~~l~~~~--------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~-~ 194 (360)
T 3hdo_A 129 -RVRTFGLTG--DFRI--AGFPERY--------EGKVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAE-S 194 (360)
T ss_dssp -EEEEECBCT--TSSB--TTCCSSB--------CSSEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSS-C
T ss_pred -EEEEeeCCC--CCCH--HHHHhhc--------CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCC-c
Confidence 999999975 3455 4443322 133788889999999999999999999999999999999986421 1
Q ss_pred ccchhhhcCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCch
Q 038818 277 PEFRHFIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRAL 355 (486)
Q Consensus 277 ~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l 355 (486)
....... ....+.+..+++|+++ ....+|+++. +++...........| ....+
T Consensus 195 -~~~~~~~-~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~-----------------------~~~~~ 248 (360)
T 3hdo_A 195 -NALELVR-RHENVVVTRTLSKSYSLAGMRIGLAIA-RPEVIAALDKIRDHY-----------------------NLDRL 248 (360)
T ss_dssp -CCTHHHH-HCSSEEEEEESTTTTSCTTSCCEEEEC-CHHHHHHHHHHSCSC-----------------------CSCHH
T ss_pred -chhHHhc-cCCCEEEEecchHhhcCCccceeeEee-CHHHHHHHHHhCCCC-----------------------CCCHH
Confidence 1111111 1134466779999987 4456788877 443332211111000 11233
Q ss_pred HHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHH
Q 038818 356 KLWLVLRSF-GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLES 434 (486)
Q Consensus 356 ~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 434 (486)
..+++...+ ..+.+++..++..++++++.+.|+++ ++++. ++..+.+.+.+.... ..++.+.
T Consensus 249 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~~---------------~~~l~~~ 311 (360)
T 3hdo_A 249 AQAACVAALRDQAYLSECCRRIRETREWFTTELRSI-GYDVI-PSQGNYLFATPPDRD---------------GKRVYDG 311 (360)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEC-CCSSSEEEEECTTCC---------------HHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEc-CCCccEEEEECCCCC---------------HHHHHHH
Confidence 333333333 24567888889999999999999988 88875 555566666543211 2456677
Q ss_pred HHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 435 INASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 435 l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
|.++|+.+.......+..++|+++. +++|+|+++++|+++.+.
T Consensus 312 l~~~gi~v~~~~~~~~~~~iRis~~----~~~e~~~l~~al~~~~~~ 354 (360)
T 3hdo_A 312 LYARKVLVRHFSDPLLAHGMRISIG----TREEMEQTLAALKEIGEG 354 (360)
T ss_dssp HHHTTEECBCCCSTTTTTSEEEECC----CHHHHHHHHHHHHHHHC-
T ss_pred HHHCCEEEEECCCCCCCCEEEEEcC----CHHHHHHHHHHHHHHhcc
Confidence 7778874332222223578999984 677999999999987643
No 138
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.88 E-value=9.4e-22 Score=193.64 Aligned_cols=317 Identities=14% Similarity=0.107 Sum_probs=192.6
Q ss_pred HHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccC
Q 038818 90 LGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGREN 169 (486)
Q Consensus 90 ~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~ 169 (486)
+.+.+...... ...|...+...++ ++++++++|.+ ..++++|||+|+..++.+...
T Consensus 20 ~~~a~~~~~~~-~~~y~~~~~~~~l----~~~la~~~g~~---------~~~~~~~gt~a~~~~~~~~~~---------- 75 (347)
T 1jg8_A 20 MRKAMAQAEVG-DDVYGEDPTINEL----ERLAAETFGKE---------AALFVPSGTMGNQVSIMAHTQ---------- 75 (347)
T ss_dssp HHHHHHTCCCC-CGGGTCCHHHHHH----HHHHHHHHTCS---------EEEEESCHHHHHHHHHHHHCC----------
T ss_pred HHHHHhcCCCC-CcccCCChHHHHH----HHHHHHHhCCc---------eEEEecCcHHHHHHHHHHhcC----------
Confidence 44444443221 1244445544444 46778888864 358889999998877655432
Q ss_pred CCCeEEEecCCCchHHHH---HHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccc-cc
Q 038818 170 ISRLVVYGSDQTHSALQK---AAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAI-TT 245 (486)
Q Consensus 170 ~~~~~v~~s~~~H~s~~~---a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~-G~ 245 (486)
+++.|+++..+|.+... .+...|+ +++.+ .++ ++.+|+++|+++|++....+..+.+|+++.++|++ |.
T Consensus 76 -~gd~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v-~~~--~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~ 148 (347)
T 1jg8_A 76 -RGDEVILEADSHIFWYEVGAMAVLSGV---MPHPV-PGK--NGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGR 148 (347)
T ss_dssp -TTCEEEEETTCHHHHSSTTHHHHHTCC---EEEEE-CEE--TTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSB
T ss_pred -CCCEEEEcCcchhhhccccchhhccCe---EEEEe-cCC--CCccCHHHHHHHhccccccccCceEEEEeccccccCCc
Confidence 56788889999987543 5677888 88888 443 46899999999886411011135678889999999 99
Q ss_pred cCC---chHHHHHHHHhCceEEeeccccchhc--cCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHH
Q 038818 246 VDP---LGPLCDIAKRYSIWVHVDAAYAGSAC--ICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKA 320 (486)
Q Consensus 246 idp---l~~I~~i~~~~g~~lhvD~a~g~~~~--~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~ 320 (486)
+-| +++|+++|++||+++|+|+||.-+.. ......... ..+|.+++++||++++| .|.+++.+++...+.
T Consensus 149 ~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~l~~~--~G~~~~~~~~~~~~~ 223 (347)
T 1jg8_A 149 VVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYA---GYADSVMFCLSKGLCAP--VGSVVVGDRDFIERA 223 (347)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHH---HTCSEEEEESSSTTCCS--SCEEEEECHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhc---ccccEEEEecccccCCC--ceEEEEcCHHHHHHH
Confidence 865 57889999999999999998742111 011111111 26788899999999877 454455555443322
Q ss_pred hcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe-cCC
Q 038818 321 LSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIV-APR 399 (486)
Q Consensus 321 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~ 399 (486)
..... +... +....++..+.+...+ +...+.+++..++++++.+.|+++ ++++. .++
T Consensus 224 ~~~~~-~~~~------------------~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~ 281 (347)
T 1jg8_A 224 RKARK-MLGG------------------GMRQAGVLAAAGIIAL--TKMVDRLKEDHENARFLALKLKEI-GYSVNPEDV 281 (347)
T ss_dssp HHHHH-HHTC------------------CCSSTHHHHHHHHHHH--HHSSTTHHHHHHHHHHHHHHHHHH-TCBCCGGGC
T ss_pred HHHHH-HcCC------------------chhHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhc-CceeccCCC
Confidence 11111 1100 0011122222222222 111122344456778888888877 67653 245
Q ss_pred CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 400 NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 400 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
..+++.+.+.... . + ..++.+.|.++|+.+... +..++|+++ +..++++|++++++.|++++
T Consensus 282 ~~~~~~~~~~~~~---------~--~--~~~~~~~l~~~gi~v~~~----~~~~iRl~~-~~~~~~e~i~~~~~~l~~~l 343 (347)
T 1jg8_A 282 KTNMVILRTDNLK---------V--N--AHGFIEALRNSGVLANAV----SDTEIRLVT-HKDVSRNDIEEALNIFEKLF 343 (347)
T ss_dssp CSSEEEEECTTSS---------S--C--HHHHHHHHHHHTEECEEE----ETTEEEEEC-CTTSCHHHHHHHHHHHHHHH
T ss_pred cceEEEEEccccc---------C--C--HHHHHHHHHHCCCEEecC----CCCeEEEEe-CCCCCHHHHHHHHHHHHHHH
Confidence 5667777664211 0 1 235666676778754322 135799998 45778899999999999987
Q ss_pred HHH
Q 038818 480 DGI 482 (486)
Q Consensus 480 ~~l 482 (486)
+++
T Consensus 344 ~~~ 346 (347)
T 1jg8_A 344 RKF 346 (347)
T ss_dssp HHH
T ss_pred Hhc
Confidence 653
No 139
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.88 E-value=2.5e-22 Score=199.58 Aligned_cols=318 Identities=13% Similarity=0.084 Sum_probs=203.2
Q ss_pred HHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccc
Q 038818 88 GFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGR 167 (486)
Q Consensus 88 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 167 (486)
..+.+.+...+... .|..++...++| +.+++++|.+ .+++++|||+|+..++.+++-.
T Consensus 16 ~~v~~a~~~~~~~~--~~~~~~~~~~l~----~~la~~~~~~---------~~~~~~sGt~al~~al~~~~~~------- 73 (367)
T 3nyt_A 16 DKIDAGIQRVLRHG--QYILGPEVTELE----DRLADFVGAK---------YCISCANGTDALQIVQMALGVG------- 73 (367)
T ss_dssp HHHHHHHHHHHHHC--CCSSCHHHHHHH----HHHHHHHTCS---------EEEEESCHHHHHHHHHHHTTCC-------
T ss_pred HHHHHHHHHHHhcC--CccCChHHHHHH----HHHHHHhCCC---------cEEEeCCHHHHHHHHHHHhCCC-------
Confidence 33444444444322 333455545555 5567777764 4799999999999888776311
Q ss_pred cCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC
Q 038818 168 ENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD 247 (486)
Q Consensus 168 ~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id 247 (486)
+++.|+++..+|.+...++...|+ +++.++++++ ++.+|+++|+++|+++ +.+|+ +++++|...
T Consensus 74 ---~gd~Vi~~~~~~~~~~~~~~~~G~---~~~~~~~~~~-~~~~d~~~l~~~i~~~------~~~v~---~~~~~G~~~ 137 (367)
T 3nyt_A 74 ---PGDEVITPGFTYVATAETVALLGA---KPVYVDIDPR-TYNLDPQLLEAAITPR------TKAII---PVSLYGQCA 137 (367)
T ss_dssp ---TTCEEEEESSSCTHHHHHHHHTTC---EEEEECBCTT-TCSBCGGGTGGGCCTT------EEEEC---CBCGGGCCC
T ss_pred ---CcCEEEECCCccHHHHHHHHHcCC---EEEEEecCCc-cCCcCHHHHHHhcCcC------CcEEE---eeCCccChh
Confidence 567888999999999999999999 9999999863 4799999999998543 33444 667899999
Q ss_pred CchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeec--cccccCCCCcceEEEeeCchHHHHHhcCCc
Q 038818 248 PLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLN--AHKWFFTTLDCCCLWVKNPNALIKALSTNP 325 (486)
Q Consensus 248 pl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~--~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~ 325 (486)
|+++|.++|++||+++|+|++|+.+........ +. ..|.++++ +||+++++..+|+++.+++...........
T Consensus 138 ~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~----~~-~~di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~~ 212 (367)
T 3nyt_A 138 DFDAINAIASKYGIPVIEDAAQSFGASYKGKRS----CN-LSTVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIAR 212 (367)
T ss_dssp CHHHHHHHHHHTTCCBEEECTTTTTCEETTEET----TS-SSSEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHTB
T ss_pred hHHHHHHHHHHcCCEEEEECccccCCeECCeec----cC-CCCEEEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHHh
Confidence 999999999999999999999975443322111 11 12777777 599998744477777766655432211110
Q ss_pred ccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCC-----
Q 038818 326 EFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRN----- 400 (486)
Q Consensus 326 ~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~----- 400 (486)
+ .. ...+.......+.+...+.+++.+..+ +.+++..++..++++++.+.|+++ ++.+...+.
T Consensus 213 -~--g~------~~~~~~~~~g~~~~~~~~~aa~~~~~l--~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~ 280 (367)
T 3nyt_A 213 -H--GQ------DRRYHHIRVGVNSRLDTLQAAILLPKL--EIFEEEIALRQKVAAEYDLSLKQV-GIGTPFIEVNNISV 280 (367)
T ss_dssp -T--TE------EETTEECSCCCBCCCCHHHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTEECC
T ss_pred -c--CC------CcCceeeccCcCCCccHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccC-CeeccCCCCCCcee
Confidence 0 00 000000011112233445555544443 566778888999999999999987 455432221
Q ss_pred eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeee--------EC------------CEeEEEEEecC
Q 038818 401 FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGM--------VA------------GIYFIRFAVGA 460 (486)
Q Consensus 401 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------~~------------~~~~lR~~~~~ 460 (486)
...+.+... . ...+.+.|.++|+.+-.... +. ....+|+.+ +
T Consensus 281 ~~~~~~~~~-~----------------~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~-~ 342 (367)
T 3nyt_A 281 YAQYTVRMD-N----------------RESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPM-H 342 (367)
T ss_dssp CSSEEEECS-S----------------HHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECC-C
T ss_pred eEEEEEEeC-C----------------HHHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccC-C
Confidence 112333322 1 23566667777874221110 00 135789987 6
Q ss_pred CCCcHHHHHHHHHHHHHH
Q 038818 461 TLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 461 ~~tt~~did~~i~~l~~~ 478 (486)
+.+|++||+++++.|++-
T Consensus 343 ~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 343 PYLDTASIKIICAALTNL 360 (367)
T ss_dssp TTCCHHHHHHHHHHHHC-
T ss_pred CCCCHHHHHHHHHHHHHH
Confidence 899999999999999763
No 140
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.87 E-value=1.8e-21 Score=196.09 Aligned_cols=337 Identities=12% Similarity=0.049 Sum_probs=214.6
Q ss_pred HHHHHHHHhhcCCC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcc
Q 038818 88 GFLGEMLSSGFNVV-GFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIG 166 (486)
Q Consensus 88 ~~~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 166 (486)
..+.+.+...+... ...|.......++++.+.+++.+.+|.+... ....++|+||++++..++.+...
T Consensus 39 ~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~----~~~i~~~~g~~~a~~~~~~~~~~------- 107 (410)
T 3e2y_A 39 SYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDP----NEEILVAVGAYGSLFNSIQGLVD------- 107 (410)
T ss_dssp HHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCT----TTSEEEESHHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCC----CCCEEEeCCcHHHHHHHHHHhcC-------
Confidence 34455555554432 2344444446789999999999998875320 02689999999999888776643
Q ss_pred ccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCC---------CCCcccCHHHHHHHHHHHHHCCCccEEEEee
Q 038818 167 RENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTK---------SSSFTLTPESLQAAIDLDIQAGLIPLFLCAT 237 (486)
Q Consensus 167 ~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~---------~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~ 237 (486)
++..|+++..+|.++...++..|. +++.+|++. ..++.+|+++|++++++. +.+|+++
T Consensus 108 ----~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~ 174 (410)
T 3e2y_A 108 ----PGDEVIIMVPFYDCYEPMVRMAGA---VPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSK------TKAIILN 174 (410)
T ss_dssp ----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTT------EEEEEEE
T ss_pred ----CCCEEEEeCCCchhhHHHHHHcCC---EEEEEeccccccccccccccCCcCCHHHHHhhcCCC------ceEEEEe
Confidence 566788888999999999999999 999999862 135679999999988542 4578888
Q ss_pred cCCcccccc---CCchHHHHHHHHhCceEEeeccccchhccCccchhh--hcCCCCCCceeeccccccC-CCCcceEEEe
Q 038818 238 VGTTAITTV---DPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHF--IDGIEGADSFSLNAHKWFF-TTLDCCCLWV 311 (486)
Q Consensus 238 ~gtt~~G~i---dpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~ 311 (486)
.++|++|.+ +++++|+++|++||+++++|++|+.+.......... +......+.+..+++|+++ ....+|+++.
T Consensus 175 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~ 254 (410)
T 3e2y_A 175 TPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIG 254 (410)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEEC
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEE
Confidence 999999999 679999999999999999999997644321111111 1111123466778899998 4566888877
Q ss_pred eCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh---------chHHHHHHHHHHHHHHHH
Q 038818 312 KNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF---------GVANLRNFLRSHVRMAQL 382 (486)
Q Consensus 312 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~---------g~~g~~~~~~~~~~~a~~ 382 (486)
+++ .... +....... +-....+...++...+ ..+.++++.++..+++++
T Consensus 255 ~~~-~~~~-~~~~~~~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (410)
T 3e2y_A 255 PAH-LIKH-LQTVQQNS--------------------FYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDR 312 (410)
T ss_dssp CHH-HHHH-HHHHHHTT--------------------TCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHH
T ss_pred CHH-HHHH-HHHHHHhh--------------------ccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHH
Confidence 543 2221 11000000 0001222222222222 245678888889999999
Q ss_pred HHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHH-HhcCcEEEeeeeEC-------CEeEE
Q 038818 383 FQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESI-NASGQLYVSHGMVA-------GIYFI 454 (486)
Q Consensus 383 l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~-------~~~~l 454 (486)
+.+.|+++ ++++..+.....+.+.+........+..... ....++.+.+ .+.|+.+.++..+. +.+++
T Consensus 313 l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~i 388 (410)
T 3e2y_A 313 MVRLLNSV-GLKPIVPDGGYFIIADVSSLGADLSDMNSDE---PYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLV 388 (410)
T ss_dssp HHHHHHTT-TCEEEBCSBSSEEEEECGGGCCCCTTCCSSC---CHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEE
T ss_pred HHHHHHHC-CCeecCCCccEEEEEEchhhhcccccccccc---cCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEE
Confidence 99999998 8887655444445555543110000000000 0112344444 35587544443332 24789
Q ss_pred EEEecCCCCcHHHHHHHHHHHHH
Q 038818 455 RFAVGATLTEDRHVIAAWKVVQE 477 (486)
Q Consensus 455 R~~~~~~~tt~~did~~i~~l~~ 477 (486)
|+++.. ++++|+++++.|++
T Consensus 389 Ris~~~---~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 389 RFCFIK---KDSTLDAAEEIFRA 408 (410)
T ss_dssp EEECCC---CHHHHHHHHHHHHT
T ss_pred EEEEcC---CHHHHHHHHHHHHh
Confidence 999843 88899999999875
No 141
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.87 E-value=2.9e-20 Score=188.39 Aligned_cols=326 Identities=12% Similarity=0.052 Sum_probs=206.2
Q ss_pred HHHHHHHHHhhcCCCcccccc-ChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHc
Q 038818 87 AGFLGEMLSSGFNVVGFNWMS-SPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEI 165 (486)
Q Consensus 87 ~~~~~~~l~~~~n~~~~~~~~-~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~ 165 (486)
|..+.+.+...+..+ .|.. ++...+++ +.+++++|.+ .+++|+|||+|+..++.+..
T Consensus 31 p~~~~~a~~~~~~~~--~y~~~~~~~~~l~----~~la~~~~~~---------~v~~~~ggt~al~~~l~~l~------- 88 (424)
T 2po3_A 31 RARLYERLDRALDSQ--WLSNGGPLVREFE----ERVAGLAGVR---------HAVATCNATAGLQLLAHAAG------- 88 (424)
T ss_dssp HHHHHHHHHHHHHHT--CCSSSCHHHHHHH----HHHHHHHTSS---------EEEEESCHHHHHHHHHHHHT-------
T ss_pred hHHHHHHHHHHHhcC--CcccCCHHHHHHH----HHHHHHhCCC---------eEEEeCCHHHHHHHHHHHcC-------
Confidence 334455555544332 2433 44444444 5566666653 57999999999988877652
Q ss_pred cccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 166 GRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 166 ~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
+++.|+++..+|.++..++...|+ +++.+|+++ +++.+|+++|++++++. +.+|+++ +++|.
T Consensus 89 -----~gd~Vlv~~~~~~~~~~~~~~~G~---~~~~v~~~~-~~~~~d~~~l~~~i~~~------~~~v~~~---~~tG~ 150 (424)
T 2po3_A 89 -----LTGEVIMPSMTFAATPHALRWIGL---TPVFADIDP-DTGNLDPDQVAAAVTPR------TSAVVGV---HLWGR 150 (424)
T ss_dssp -----CCSEEEEESSSCTHHHHHHHHTTC---EEEEECBCT-TTSSBCHHHHGGGCCTT------EEEEEEE---CGGGC
T ss_pred -----CCCEEEECCCccHHHHHHHHHcCC---EEEEEecCC-CcCCcCHHHHHHhhCcC------CcEEEEE---CCCCC
Confidence 346788899999999999999999 999999985 35789999999988642 3455554 37899
Q ss_pred cCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccc--cccCCCCcceEEEeeCchHHHHHhcC
Q 038818 246 VDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAH--KWFFTTLDCCCLWVKNPNALIKALST 323 (486)
Q Consensus 246 idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~h--K~l~~p~~~g~~~~~~~~~~~~~~~~ 323 (486)
+.|+++|.++|+++|+++++|++|+.+..+.. +. +. ...|.++.++| |++++ ..+|+++.++++........
T Consensus 151 ~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~--~~-~~--~~~di~~~S~sk~K~l~~-~~~G~~v~~~~~l~~~l~~~ 224 (424)
T 2po3_A 151 PCAADQLRKVADEHGLRLYFDAAHALGCAVDG--RP-AG--SLGDAEVFSFHATKAVNA-FEGGAVVTDDADLAARIRAL 224 (424)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTCTTCEETT--EE-TT--SSSSEEEEECCTTSSSCC-SSCEEEEESCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCEEEEECccccCCeECC--ee-cc--cccCEEEEeCCCCCCccC-CCCeEEEeCCHHHHHHHHHH
Confidence 99999999999999999999999984333221 11 11 12467777766 87766 55677777655543322111
Q ss_pred CcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCC---
Q 038818 324 NPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRN--- 400 (486)
Q Consensus 324 ~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~--- 400 (486)
.. +.... .+... ......+...+.++.++.. .+++++..++..++++++.+.|++++++++..++.
T Consensus 225 ~~-~~~~~------~~~~~--~~g~~~~~~~~~aa~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~ 293 (424)
T 2po3_A 225 HN-FGFDL------PGGSP--AGGTNAKMSEAAAAMGLTS--LDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGL 293 (424)
T ss_dssp HB-TTTTC------TTCCT--TCCCBCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSC
T ss_pred Hh-cCccc------ccccc--ccCcCCCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCc
Confidence 00 00000 00000 0111223344555555543 46778888899999999999999988998875332
Q ss_pred --eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeE-C--------C------Ee-------EEEE
Q 038818 401 --FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMV-A--------G------IY-------FIRF 456 (486)
Q Consensus 401 --~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~--------~------~~-------~lR~ 456 (486)
..++.+.+.+.. .+....++.+.|.+.|+.+ .+... . + .. .+|+
T Consensus 294 ~~~~~~~i~~~~~~-----------~~~~~~~l~~~L~~~gI~v-~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l 361 (424)
T 2po3_A 294 NNHQYVIVEIDEAT-----------TGIHRDLVMEVLKAEGVHT-RAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSL 361 (424)
T ss_dssp CCCCCEEEEECHHH-----------HSSCHHHHHHHHHHTTEEC-BCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEE
T ss_pred cccEEEEEEECCcc-----------chhhHHHHHHHHHHCCCce-ecccCCccccchhhhhcCCCCChhHHHHhcCEEEe
Confidence 245556554200 0001235666777778743 22100 0 0 01 2777
Q ss_pred EecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 457 AVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 457 ~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
++ +..++++|+++++++|++++++.
T Consensus 362 ~~-~~~~t~e~i~~~~~~L~~~~~~~ 386 (424)
T 2po3_A 362 PT-GTAIGDDDIRRVADLLRLCATRG 386 (424)
T ss_dssp CC-STTCCHHHHHHHHHHHHHHHHHH
T ss_pred eC-CCCCCHHHHHHHHHHHHHHHhhh
Confidence 65 57889999999999999887654
No 142
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.87 E-value=2.5e-20 Score=186.37 Aligned_cols=282 Identities=14% Similarity=0.135 Sum_probs=190.1
Q ss_pred HHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHH----H
Q 038818 114 LENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKA----A 189 (486)
Q Consensus 114 le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a----~ 189 (486)
...++++.+++++|.+ . . +++++||+|+..++.++.. ++..|+++...|.++... +
T Consensus 53 ~~~~l~~~la~~~~~~-~-------~-i~~~sGt~a~~~~~~~~~~-----------~g~~vl~~~~~~~~~~~~~~~~~ 112 (386)
T 1cs1_A 53 TRDVVQRALAELEGGA-G-------A-VLTNTGMSAIHLVTTVFLK-----------PGDLLVAPHDCYGGSYRLFDSLA 112 (386)
T ss_dssp HHHHHHHHHHHHHTCS-E-------E-EEESSHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhCCC-c-------E-EEeCCHHHHHHHHHHHHhC-----------CCCEEEEecCCcHhHHHHHHHHH
Confidence 3445556778888775 2 3 4445669999888776532 566788888999885554 3
Q ss_pred HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccc
Q 038818 190 QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 190 ~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
+..|+ +++.+|.+ |+++|+++|+++ +.+|+++.++|++|.+.|+++|+++|++||+++|+|++|
T Consensus 113 ~~~g~---~~~~~~~~-------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~ 176 (386)
T 1cs1_A 113 KRGCY---RVLFVDQG-------DEQALRAALAEK------PKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTF 176 (386)
T ss_dssp TTTSC---EEEEECTT-------CHHHHHHHHHTC------CSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTT
T ss_pred HhcCC---EEEEeCCC-------CHHHHHHhhccC------CcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCC
Confidence 55677 88888753 899999999753 347888999999999999999999999999999999999
Q ss_pred cchhccCccchhhhcCCCCCCceeeccccccCCCCcc--eEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCcccc
Q 038818 270 AGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDC--CCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQIT 347 (486)
Q Consensus 270 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~--g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 347 (486)
+++....+ .. .+.|.++.++||++++|.+. |++++++++...........+
T Consensus 177 ~~~~~~~~-~~------~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~-------------------- 229 (386)
T 1cs1_A 177 LSPALQNP-LA------LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNI-------------------- 229 (386)
T ss_dssp TCTTTCCG-GG------GTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHH--------------------
T ss_pred cccccCCc-cc------cCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhc--------------------
Confidence 87654322 11 26899999999999988763 888887744432211100000
Q ss_pred CCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEec-C----------------CCeeEEEEEeec
Q 038818 348 LSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVA-P----------------RNFAVVCFRVLP 410 (486)
Q Consensus 348 ~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~----------------~~~~~v~f~~~~ 410 (486)
+.....+..+.+++.+ +.+.+..++..++++++.+.|++++.+.-.. + ...++++|.+..
T Consensus 230 -~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (386)
T 1cs1_A 230 -GVTGGAFDSYLLLRGL--RTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG 306 (386)
T ss_dssp -TCBCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS
T ss_pred -CCCCCHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC
Confidence 0011334445444433 4456677778888999999998887664331 1 126788888653
Q ss_pred CCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeEC---------------------------CEeEEEEEecCCCC
Q 038818 411 SASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVA---------------------------GIYFIRFAVGATLT 463 (486)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---------------------------~~~~lR~~~~~~~t 463 (486)
. ...+.+.+.+.|++. ....+. ..+++|+++. ..+
T Consensus 307 ~----------------~~~~~~~l~~~gi~~-~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~-~~~ 368 (386)
T 1cs1_A 307 D----------------EQTLRRFLGGLSLFT-LAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTG-IED 368 (386)
T ss_dssp C----------------HHHHHHHHHTCSSSE-EBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECC-SSC
T ss_pred C----------------HHHHHHHHHhCCcce-EcccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEc-cCC
Confidence 1 234555666778743 211000 1368999995 477
Q ss_pred cHHHHHHHHHHHHHHH
Q 038818 464 EDRHVIAAWKVVQEKL 479 (486)
Q Consensus 464 t~~did~~i~~l~~~~ 479 (486)
++++|+.+.++|+++.
T Consensus 369 ~~~~i~~l~~al~~~~ 384 (386)
T 1cs1_A 369 GEDLIADLENGFRAAN 384 (386)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhh
Confidence 7778888888887653
No 143
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.87 E-value=5.1e-21 Score=196.31 Aligned_cols=355 Identities=14% Similarity=0.078 Sum_probs=201.5
Q ss_pred CcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHH
Q 038818 75 YYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTL 154 (486)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al 154 (486)
.|+++.++.+. +. +.+.+...+......|...+...++ ++++++++|.+ .+++|+|||+|+..++
T Consensus 44 ~ylD~~~~~~~-~~-v~~a~~~~~~~~~~~y~~~~~~~~l----~~~la~~~~~~---------~v~~t~ggt~A~~~al 108 (467)
T 1ax4_A 44 VYIDLLTDSGT-NA-MSDHQWAAMITGDEAYAGSRNYYDL----KDKAKELFNYD---------YIIPAHQGRGAENILF 108 (467)
T ss_dssp CSEECSCSSSC-CC-EEHHHHHHHHTCCCCSSSCHHHHHH----HHHHHHHHCCC---------EEEEESSHHHHHHHHH
T ss_pred eeeecccCcCC-HH-HHHHHHHHHhhcccccccCccHHHH----HHHHHHHcCCC---------cEEEcCCcHHHHHHHH
Confidence 47777654333 22 2233333332222245444544444 45677777752 5899999999999999
Q ss_pred HHHHHHHHHHccccCCCCeE---EEecCCCch-HHHHHHHHcCCCCCCeEEEecCC----C----CCcccCHHHHHHHHH
Q 038818 155 AAARDQILNEIGRENISRLV---VYGSDQTHS-ALQKAAQIAGIDPKNFRAIKTTK----S----SSFTLTPESLQAAID 222 (486)
Q Consensus 155 ~~a~~~~~~~~~~~~~~~~~---v~~s~~~H~-s~~~a~~~~G~g~~~v~~v~~d~----~----~~~~~d~~~L~~~l~ 222 (486)
.+++..... ++.. |+++ ..|+ +...++...|. +++.++.+. + .++.+|+++|+++|+
T Consensus 109 ~~~~~~~~~-------~Gd~~~~viv~-~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~ 177 (467)
T 1ax4_A 109 PVLLKYKQK-------EGKAKNPVFIS-NFHFDTTAAHVELNGC---KAINIVTEKAFDSETYDDWKGDFDIKKLKENIA 177 (467)
T ss_dssp HHHHHHHHH-------TTCCSSCEEEE-SSCCHHHHHHHHHTTC---EEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHH
T ss_pred HHHHHhhcc-------CCCccceEEEe-ccccchhhHHHhccCC---ceecccccccccccccCCcccccCHHHHHHHHH
Confidence 988763211 1222 4555 5664 45667788888 777665431 0 135799999999998
Q ss_pred HHHHCCCccEEEEeecCCccc-ccc---CCchHHHHHHHHhCceEEeeccccc-hhcc--------Cc-cchhhhcC-CC
Q 038818 223 LDIQAGLIPLFLCATVGTTAI-TTV---DPLGPLCDIAKRYSIWVHVDAAYAG-SACI--------CP-EFRHFIDG-IE 287 (486)
Q Consensus 223 ~~~~~g~~p~~vv~~~gtt~~-G~i---dpl~~I~~i~~~~g~~lhvD~a~g~-~~~~--------~~-~~~~~~~~-~~ 287 (486)
+.. ...+.+|+++.++|++ |.+ +++++|+++|++||+|+|+|++++. +..+ .+ ........ ..
T Consensus 178 ~~~--~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (467)
T 1ax4_A 178 QHG--ADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYK 255 (467)
T ss_dssp HHC--GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGG
T ss_pred hcC--CCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhcc
Confidence 642 0124578888899999 665 5688999999999999999998654 1111 00 00110000 02
Q ss_pred CCCceeeccccccCCCCcceEEEeeCc-hHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCc-hHHHHHHHHhc
Q 038818 288 GADSFSLNAHKWFFTTLDCCCLWVKNP-NALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRA-LKLWLVLRSFG 365 (486)
Q Consensus 288 ~aDsi~~~~hK~l~~p~~~g~~~~~~~-~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~-l~~~~~l~~~g 365 (486)
.+|++++++||+++.|.| |+++.+++ +...........+ ... . . ..+..... .++..++...-
T Consensus 256 ~~d~~~~s~sK~~g~~~G-g~~~~~d~~~l~~~~~~~~~~~-~~~-~---------~---~~~~~~~~~~a~~~~l~~~~ 320 (467)
T 1ax4_A 256 YADALTMSAKKDPLLNIG-GLVAIRDNEEIFTLARQRCVPM-EGF-V---------T---YGGLAGRDMAAMVQGLEEGT 320 (467)
T ss_dssp GCSEEEEETTSTTCCSSC-EEEEESSCHHHHHHHHHHHHHH-TCS-T---------T---TTTCCHHHHHHHHHHHHHTT
T ss_pred ccceEEEeccccCCCCcc-eEEEeCCHHHHHHHHHhhcccc-ccc-c---------c---cCCccchHHHHHHHHHHHhh
Confidence 578999999999987744 56666645 5443221111111 000 0 0 00111011 11111233221
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHH-HhcCcEEEe
Q 038818 366 VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESI-NASGQLYVS 444 (486)
Q Consensus 366 ~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~ 444 (486)
+ .+.+++..++++++.+.|++ +++++..+.....+.+....-..... .. +....++.+.| .+.|+.+..
T Consensus 321 -~--~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~l~~~L~~~~gv~v~~ 390 (467)
T 1ax4_A 321 -E--EEYLHYRIGQVKYLGDRLRE-AGIPIQYPTGGHAVFVDCKKLVPQIP----GD--QFPAQAVINALYLESGVRAVE 390 (467)
T ss_dssp -C--HHHHHHHHHHHHHHHHHHHH-TTCCBCSSCCSSEEEEESTTTCTTSC----GG--GCHHHHHHHHHHHHHCEECEE
T ss_pred -h--hhHHHHHHHHHHHHHHHHHh-CCCCcccCCCceEEEEehhhhccccc----cC--CCCHHHHHHHHHHhcCceeee
Confidence 1 22444555778889999987 47777655555555555211000000 00 11134567777 677875443
Q ss_pred eeeE-------------CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 445 HGMV-------------AGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 445 ~~~~-------------~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
.+.. ....++|+++....+|++||+++++.|+++++++
T Consensus 391 ~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~ 441 (467)
T 1ax4_A 391 IGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKF 441 (467)
T ss_dssp ESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHH
T ss_pred cCccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHhh
Confidence 1211 0136899998544588999999999999887664
No 144
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.87 E-value=8.8e-20 Score=186.56 Aligned_cols=318 Identities=13% Similarity=0.058 Sum_probs=196.8
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCc-
Q 038818 104 NWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTH- 182 (486)
Q Consensus 104 ~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H- 182 (486)
.|..++...++++ .+++++|.+ .+++|+|||+|+..++.++.. +++ +++..+|
T Consensus 70 ~y~~~~~~~~l~~----~la~~~~~~---------~~~~~~~gt~a~~~al~~l~~-----------~gd--i~~~~~~~ 123 (456)
T 2ez2_A 70 AYAGSENFYHLER----TVQELFGFK---------HIVPTHQGRGAENLLSQLAIK-----------PGQ--YVAGNMYF 123 (456)
T ss_dssp CSSSCHHHHHHHH----HHHHHHCCS---------EEEEESSHHHHHHHHHHHHCC-----------TTC--EEEESSCC
T ss_pred hcccChhHHHHHH----HHHHHhCCC---------cEEEeCCcHHHHHHHHHHhCC-----------CCC--Eecccccc
Confidence 4555555555554 566666653 579999999999888877632 344 4456677
Q ss_pred hHHHHHHHHcCCCCCCeEEEecCCC----C----CcccCHHHHHHHHHHHHHCCCccEEEEeecCCc-cccccCC---ch
Q 038818 183 SALQKAAQIAGIDPKNFRAIKTTKS----S----SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTT-AITTVDP---LG 250 (486)
Q Consensus 183 ~s~~~a~~~~G~g~~~v~~v~~d~~----~----~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt-~~G~idp---l~ 250 (486)
.+...++...|. +++.++++++ . ++.+|+++|+++|++.+. ..+.+|+++.++| ++|.+-| ++
T Consensus 124 ~~~~~~~~~~G~---~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~--~~~~~v~l~~p~n~ptG~~~~~~~l~ 198 (456)
T 2ez2_A 124 TTTRYHQEKNGA---VFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGA--ENIAYICLAVTVNLAGGQPVSMANMR 198 (456)
T ss_dssp HHHHHHHHHTTC---EEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCG--GGEEEEEEESSBTTTTSBCCCHHHHH
T ss_pred chhHHHHHHcCC---EEEEecccccccccccccccCCCCHHHHHHHHHhccc--cceeEEEEeccCCCCCCccCCHHHHH
Confidence 777888999999 9999988731 1 268999999999987541 1235677787777 8998866 99
Q ss_pred HHHHHHHHhCceEEeeccccch---------hccCccch-h---hhcCCCCCCceeeccccccCCCCcceEEEeeCchHH
Q 038818 251 PLCDIAKRYSIWVHVDAAYAGS---------ACICPEFR-H---FIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNAL 317 (486)
Q Consensus 251 ~I~~i~~~~g~~lhvD~a~g~~---------~~~~~~~~-~---~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~ 317 (486)
+|+++|++||+++|+|++|+.+ ..+..... . .+. ...|.+++++||+++.| .+|+++.++++..
T Consensus 199 ~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~~S~kk~~~~~-~gG~~~~~~~~~~ 275 (456)
T 2ez2_A 199 AVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMF--SYADGCTMSGKKDCLVN-IGGFLCMNDDEMF 275 (456)
T ss_dssp HHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHH--TTCSEEEEETTTTTCCS-SCEEEEESCHHHH
T ss_pred HHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhc--ccCCEEEEeCcccCCCC-ceeEEEECCHHHH
Confidence 9999999999999999999763 11111110 0 011 24688888899998755 4677776565543
Q ss_pred HHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHH-HHHHHHHHHHHHHHHHHHhCCCCeEEe
Q 038818 318 IKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANL-RNFLRSHVRMAQLFQELVGGDNRFEIV 396 (486)
Q Consensus 318 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~-~~~~~~~~~~a~~l~~~L~~~~~~~~~ 396 (486)
.........+... ....+.....+.. +++... +.+ ++..++..++++++.+.|++. ++++.
T Consensus 276 ~~~~~~~~~~~~~--------------~~~~~~~~~~~~a-~a~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 337 (456)
T 2ez2_A 276 SSAKELVVVYEGM--------------PSYGGLAGRDMEA-MAIGLR--EAMQYEYIEHRVKQVRYLGDKLKAA-GVPIV 337 (456)
T ss_dssp HHHHHHHHHHTCC--------------TTTTTCCHHHHHH-HHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHT-TCCBC
T ss_pred HHHHHHHhhccCc--------------ccccCcchhHHHH-HHHHHH--HHhHHHHHHHHHHHHHHHHHHHhcC-CCccc
Confidence 3221111111000 0000101111111 011111 233 466677788889999999875 77766
Q ss_pred cCCCeeEEEEEeec--CCCCCCCCCCccchHHH-HHHHHHHH-HhcCcEEEeeee-------------ECCEeEEEEEec
Q 038818 397 APRNFAVVCFRVLP--SASGLGDGKANEGANEL-NRKLLESI-NASGQLYVSHGM-------------VAGIYFIRFAVG 459 (486)
Q Consensus 397 ~~~~~~~v~f~~~~--~~~~~~~~~~~~~~~~~-~~~l~~~l-~~~g~~~~~~~~-------------~~~~~~lR~~~~ 459 (486)
.+.....+.+.+.. ... ...++ .+.+.+.| .+.|+..+.... ..+..++|+++.
T Consensus 338 ~p~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~ 408 (456)
T 2ez2_A 338 EPVGGHAVFLDARRFCEHL---------TQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIP 408 (456)
T ss_dssp SSCCSSEEEEEHHHHTTTS---------CGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECC
T ss_pred cCCCceEEEEEhHHhcCCC---------ChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeC
Confidence 55444555555431 110 01222 34556666 466875443221 112468999986
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHH
Q 038818 460 ATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 460 ~~~tt~~did~~i~~l~~~~~~l 482 (486)
...+++++|+++++.|++++++.
T Consensus 409 ~~~~t~e~i~~~~~~l~~~l~~~ 431 (456)
T 2ez2_A 409 RRVYTYAHMDVVADGIIKLYQHK 431 (456)
T ss_dssp TTTCCHHHHHHHHHHHHHHHHTG
T ss_pred CCCCCHHHHHHHHHHHHHHHhhh
Confidence 43378899999999999988764
No 145
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.87 E-value=5e-21 Score=190.67 Aligned_cols=307 Identities=11% Similarity=0.080 Sum_probs=197.2
Q ss_pred ChhhHHHHHHHHHHH-HHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHH-HHHHHHHccccCCCCeEEEecCCCchHH
Q 038818 108 SPAATELENIVMDWL-GEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAA-RDQILNEIGRENISRLVVYGSDQTHSAL 185 (486)
Q Consensus 108 ~~~~~~le~~~~~~l-~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a-~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 185 (486)
+|...++|+. + ++++|.. . ..++++|||+|+..++.+. .. +++.|+++..+|.+.
T Consensus 35 ~~~~~~l~~~----~~a~~~g~~-~-------~~v~~~sgt~al~~al~~l~~~-----------~Gd~Vi~~~~~~~~~ 91 (377)
T 3ju7_A 35 GPINQRFEQT----IMSGFFQNR-G-------AVTTVANATLGLMAAIQLKKRK-----------KGKYALMPSFTFPAT 91 (377)
T ss_dssp CHHHHHHHHH----HHHHTSTTC-S-------EEEEESCHHHHHHHHHHHHSCT-----------TCCEEEEESSSCTHH
T ss_pred CHHHHHHHHH----HHHHHhCCC-C-------eEEEeCCHHHHHHHHHHHcCCC-----------CcCEEEECCCCcHHH
Confidence 5665666654 6 7777732 2 5799999999998887765 22 677899999999999
Q ss_pred HHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHH-HHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEE
Q 038818 186 QKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAID-LDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVH 264 (486)
Q Consensus 186 ~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~-~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lh 264 (486)
..++...|+ +++.+++++ ++|.+|+++|++++. +.. .+.+|+ +++++|.+.|+++|.++|+ +|+++|
T Consensus 92 ~~~~~~~G~---~~~~v~~~~-~~~~~d~~~l~~~i~~~~~----~tk~v~---~~~~~G~~~~~~~i~~la~-~~~~vi 159 (377)
T 3ju7_A 92 PLAAIWCGL---EPYFIDISI-DDWYMDKTVLWDKIEELKE----EVAIVV---PYATFGSWMNLEEYEELEK-KGVPVV 159 (377)
T ss_dssp HHHHHHTTC---EEEEECBCT-TTCSBCHHHHHHHHHHHGG----GEEEEC---CBCGGGBCCCCHHHHHHHH-TTCCBE
T ss_pred HHHHHHcCC---EEEEEecCC-ccCCcCHHHHHHHHhcCCC----CceEEE---EECCCCCccCHHHHHHHHh-cCCEEE
Confidence 999999999 999999985 368999999999984 430 123444 4567899999999999999 999999
Q ss_pred eeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCc
Q 038818 265 VDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDW 344 (486)
Q Consensus 265 vD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 344 (486)
+|+||+.+..... +..-.....++.+++++||+++++ ..|+++++++....+...... +-... .+.
T Consensus 160 ~D~a~a~g~~~~~--~~~g~~~~d~~~~S~~~~K~l~~g-~gG~~~~~~~~l~~~~~~~~~-~g~~~--------~~~-- 225 (377)
T 3ju7_A 160 VDAAPGFGLMNGG--MHYGQDFSGMIIYSFHATKPFGIG-EGGLIYSKNEEDIQRIKRMGN-FGFDT--------NRE-- 225 (377)
T ss_dssp EECTTCTTCEETT--EETTTTCSSEEEEECBTTSSSCCB-SCEEEEESCHHHHHHHHHHTB-TTBCT--------TSC--
T ss_pred EECCCccCCeECC--EeccCCCCcEEEEECCCCCcCCCC-CcEEEEECCHHHHHHHHHHHh-cCCCC--------CCc--
Confidence 9999975543221 110011124556677789999874 567777777655432211110 00000 000
Q ss_pred cccCCC--CCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEE-ecCCC----ee-EEEEEeecCCCCCC
Q 038818 345 QITLSR--RFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEI-VAPRN----FA-VVCFRVLPSASGLG 416 (486)
Q Consensus 345 ~~~~sr--~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~-~~~~~----~~-~v~f~~~~~~~~~~ 416 (486)
....+. +...+.++..+.. .+.+.+..++..++++++.+.|++++++.+ +.++. .. .+.+.+...
T Consensus 226 ~~~~g~~~~~~~~~aa~~~~~--l~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 298 (377)
T 3ju7_A 226 CTMMGFNCKMSEYAAAIGIAT--MKKWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEE----- 298 (377)
T ss_dssp BCSSCCBCCCCHHHHHHHHHH--HHTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTT-----
T ss_pred eeeccccCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCCh-----
Confidence 111121 2334444444443 477888899999999999999998865422 11111 11 234443321
Q ss_pred CCCCccchHHHHHHHHHHHHhcCcEEEeee--eE------C-------------CEeEEEEEecCCCCcHHHHHHHHHHH
Q 038818 417 DGKANEGANELNRKLLESINASGQLYVSHG--MV------A-------------GIYFIRFAVGATLTEDRHVIAAWKVV 475 (486)
Q Consensus 417 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~------~-------------~~~~lR~~~~~~~tt~~did~~i~~l 475 (486)
.....+.+.|.++|+..-... .. . ....+|+.+ ++.+|++|++++++.|
T Consensus 299 ---------~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~-~~~~t~~di~~v~~~l 368 (377)
T 3ju7_A 299 ---------VRNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPL-WEGMTKEIVEQIVICL 368 (377)
T ss_dssp ---------SCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECC-CTTCCHHHHHHHHHHH
T ss_pred ---------hhHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCC-CCCCCHHHHHHHHHHH
Confidence 013467778888887422111 00 0 135799987 6889999999999999
Q ss_pred HHHHH
Q 038818 476 QEKLD 480 (486)
Q Consensus 476 ~~~~~ 480 (486)
++++.
T Consensus 369 ~~~~~ 373 (377)
T 3ju7_A 369 GQKVV 373 (377)
T ss_dssp TC---
T ss_pred HHHHh
Confidence 87764
No 146
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.87 E-value=1.7e-20 Score=189.56 Aligned_cols=333 Identities=8% Similarity=-0.023 Sum_probs=210.4
Q ss_pred HHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcc
Q 038818 87 AGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIG 166 (486)
Q Consensus 87 ~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 166 (486)
+..+.+.+..........|....+..++++.+.+|+.+..+.+.. ..+++|+||++|+..++.+..+
T Consensus 58 ~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~------~~i~~t~g~~~al~~~~~~l~~------- 124 (418)
T 3rq1_A 58 LKTVKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEGH------IRSIATAGGTGGIHHLIHNYTE------- 124 (418)
T ss_dssp CHHHHHHHHTCCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSE------EEEEEESHHHHHHHHHHHHHSC-------
T ss_pred cHHHHHHHHHhcccccCCCCCCCChHHHHHHHHHHHhcccCcccc------ccEEECCchHHHHHHHHHHhcC-------
Confidence 334555555544323344555555788899988988877664321 2689999999999888776543
Q ss_pred ccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecC-Cccccc
Q 038818 167 RENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVG-TTAITT 245 (486)
Q Consensus 167 ~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~g-tt~~G~ 245 (486)
+++.|+++..+|.++...++..|. +++.+|+++. ++.+|+++|++++++..... ...+++++.+ +|++|.
T Consensus 125 ----~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~~-~~~~vi~~~p~~NPtG~ 195 (418)
T 3rq1_A 125 ----PGDEVLTADWYWGAYRVICSDTGR---TLVTYSLFDE-HNNFNHEAFQNRVNELAAKQ-TNVVVIFNTPGNNPTGY 195 (418)
T ss_dssp ----TTCEEEEESSCCTHHHHHHHHTTC---EEEEECSBCT-TSSBCHHHHHHHHHHHHHHC-SEEEEEEECSSCTTTCC
T ss_pred ----CCCEEEECCCCchhHHHHHHHcCC---EEEEEeeeCC-CCCcCHHHHHHHHHHhhccC-CCEEEEEeCCCCCCCCC
Confidence 567888899999999999999999 9999998643 47999999999998642211 1236777777 999999
Q ss_pred cCCchHHH---HHHH------HhCceEEeeccccchhccCccchhhhcCCCC--CC---ceeeccccccCCC-CcceEEE
Q 038818 246 VDPLGPLC---DIAK------RYSIWVHVDAAYAGSACICPEFRHFIDGIEG--AD---SFSLNAHKWFFTT-LDCCCLW 310 (486)
Q Consensus 246 idpl~~I~---~i~~------~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~--aD---si~~~~hK~l~~p-~~~g~~~ 310 (486)
+-|.+++. ++|+ +||+++++|++|.++................ -| .++.+++|.++.| ..+|+++
T Consensus 196 ~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~ 275 (418)
T 3rq1_A 196 SIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMI 275 (418)
T ss_dssp CCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEE
T ss_pred CCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEE
Confidence 98865555 5555 8999999999996654211111111111111 23 4566899998744 5678877
Q ss_pred e--eCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchH--------HHHHHHHHHHHHH
Q 038818 311 V--KNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVA--------NLRNFLRSHVRMA 380 (486)
Q Consensus 311 ~--~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~--------g~~~~~~~~~~~a 380 (486)
. ++++.... +.....+.... .......+...+....+... ...++.++..+++
T Consensus 276 ~~~~~~~~~~~-~~~~~~~~~~~----------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 338 (418)
T 3rq1_A 276 GISDDEEIADE-FFEVNKSTSRA----------------TWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRA 338 (418)
T ss_dssp EEESSHHHHHH-HHHHHHHHHHH----------------HTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCHHHHHH-HHHHHHHHHhh----------------ccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 34444332 21101111000 00011233334444433221 2335556777888
Q ss_pred HHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecC
Q 038818 381 QLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGA 460 (486)
Q Consensus 381 ~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~ 460 (486)
+++.+.|+++ ++++. ++..+.+.|.-.+. ..++.+.|.++|+.+.++ ..++|+++.
T Consensus 339 ~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~----------------~~~~~~~l~~~gi~v~~g-----~~~iRis~~- 394 (418)
T 3rq1_A 339 DIFKQEAAQV-GLPML-PYRGGFFITIPTDS----------------ANAICEELKKEHIYVIAL-----ANGIRIAAC- 394 (418)
T ss_dssp HHHHHHHHHH-TCCCC-CCCSSSEEEEECTT----------------HHHHHHHHHHTTEECEEC-----SSEEEEEGG-
T ss_pred HHHHHHHHhc-CCCCC-CCCceEEEEcCCCC----------------HHHHHHHHHhCCEEEecC-----CCCeEEEEe-
Confidence 8899999877 77765 44445544422111 234566677778754332 357999974
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHh
Q 038818 461 TLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 461 ~~tt~~did~~i~~l~~~~~~l~ 483 (486)
..++++|+++++.|+++++++.
T Consensus 395 -~~~~~~i~~~~~~l~~~l~~~~ 416 (418)
T 3rq1_A 395 -GIPKCQMTGLAEKIYNAMKSLG 416 (418)
T ss_dssp -GSCHHHHTTHHHHHHHHHHHTT
T ss_pred -cCCHHHHHHHHHHHHHHHHHHh
Confidence 4578899999999999988764
No 147
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.87 E-value=2.1e-20 Score=187.49 Aligned_cols=323 Identities=9% Similarity=0.051 Sum_probs=209.0
Q ss_pred HHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCC-CCCccCCCc-ceEEcCCchHHHHHHHHHHHHHHHHHc
Q 038818 88 GFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLP-KSFLFSGTG-GGVIQGTTCEAILCTLAAARDQILNEI 165 (486)
Q Consensus 88 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~-~~~~~~~~~-~~~~t~ggt~a~~~al~~a~~~~~~~~ 165 (486)
..+.+.+...+. ....|.......++++.+.+|+.+.+|.+ .. .. ..++|+||++++..++.+.+.
T Consensus 46 ~~v~~a~~~~~~-~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~-----~~~~i~~t~g~~~al~~~~~~~~~------ 113 (396)
T 3jtx_A 46 KVITDALTASLH-ELEKYPLTAGLPELRQACANWLKRRYDGLTVD-----ADNEILPVLGSREALFSFVQTVLN------ 113 (396)
T ss_dssp HHHHHHHHHTGG-GGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCC-----TTTSEEEESSHHHHHHHHHHHHCC------
T ss_pred HHHHHHHHHHhh-hccCCCCCCCcHHHHHHHHHHHHHhcCCCCCC-----CCCeEEEcCCcHHHHHHHHHHHhC------
Confidence 345555555443 23344444446789999999999999975 21 12 689999999999888776643
Q ss_pred cccCCCC-----eEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCC
Q 038818 166 GRENISR-----LVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGT 240 (486)
Q Consensus 166 ~~~~~~~-----~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gt 240 (486)
++ +.|+++..+|.++..+++..|. +++.+|+++ +.+.+|+++|++++++. +.+|+++.++
T Consensus 114 -----~g~~~~~d~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~-~g~~~d~~~l~~~~~~~------~~~v~l~~p~ 178 (396)
T 3jtx_A 114 -----PVSDGIKPAIVSPNPFYQIYEGATLLGGG---EIHFANCPA-PSFNPDWRSISEEVWKR------TKLVFVCSPN 178 (396)
T ss_dssp -----C---CCCCEEEEEESCCHHHHHHHHHTTC---EEEEEECCT-TTCCCCGGGSCHHHHHT------EEEEEEESSC
T ss_pred -----CCCccCCCEEEEcCCCcHhHHHHHHHcCC---EEEEeecCC-CCCccCHHHHHHhhccC------cEEEEEECCC
Confidence 32 5788888999999999999999 999999964 34688999999999763 4477778999
Q ss_pred ccccccCCchH---HHHHHHHhCceEEeeccccchhccCccchhhhc------CCCCCCceeeccccccC-CCCcceEEE
Q 038818 241 TAITTVDPLGP---LCDIAKRYSIWVHVDAAYAGSACICPEFRHFID------GIEGADSFSLNAHKWFF-TTLDCCCLW 310 (486)
Q Consensus 241 t~~G~idpl~~---I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~------~~~~aDsi~~~~hK~l~-~p~~~g~~~ 310 (486)
|++|.+-|.++ |+++|++||+++++|++|+.+..........+. .-...+.+..+++|.++ ....+|+++
T Consensus 179 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 258 (396)
T 3jtx_A 179 NPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVA 258 (396)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEE
T ss_pred CCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEE
Confidence 99999976554 999999999999999999764332101111110 01245677889999765 445678776
Q ss_pred eeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHhC
Q 038818 311 VKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF-GVANLRNFLRSHVRMAQLFQELVGG 389 (486)
Q Consensus 311 ~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~ 389 (486)
. ++..... +.....+. +.....+...++...+ ..+.+.+..++..++.+++.+.|++
T Consensus 259 ~-~~~~~~~-~~~~~~~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~ 316 (396)
T 3jtx_A 259 G-DAELLKN-FLLYRTYH--------------------GSAMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQ 316 (396)
T ss_dssp E-CHHHHHH-HHHHHHHH--------------------TCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred e-CHHHHHH-HHHHHhhc--------------------ccCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5 4433322 21100000 0011223333333332 2456778888888999999999987
Q ss_pred CCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeE--------CCEeEEEEEecC
Q 038818 390 DNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMV--------AGIYFIRFAVGA 460 (486)
Q Consensus 390 ~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~--------~~~~~lR~~~~~ 460 (486)
. +.+..+.....+.+.+.... ...+.+.|. +.|+.+.++..+ .+..++|++++.
T Consensus 317 ~--~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~ 379 (396)
T 3jtx_A 317 V--FDVKLPDASFYIWLKVPDGD---------------DLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA 379 (396)
T ss_dssp T--SCCCCCSSSSEEEEECTTSC---------------HHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS
T ss_pred c--CCccCCCeeEEEEEECCCCC---------------HHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC
Confidence 5 33333333334444543210 234555554 458754433222 235789999853
Q ss_pred CCCcHHHHHHHHHHHHHHH
Q 038818 461 TLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 461 ~~tt~~did~~i~~l~~~~ 479 (486)
++++|+++++.|.+++
T Consensus 380 ---~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 380 ---DVATCVKAAEDIVSLY 395 (396)
T ss_dssp ---CHHHHHHHHHHHHHHC
T ss_pred ---CHHHHHHHHHHHHHHh
Confidence 7889999999998763
No 148
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.87 E-value=5.7e-21 Score=192.91 Aligned_cols=240 Identities=14% Similarity=0.085 Sum_probs=167.3
Q ss_pred HHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH----HHH
Q 038818 115 ENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK----AAQ 190 (486)
Q Consensus 115 e~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~----a~~ 190 (486)
..++.+++++++|.+ ..+++++|++|+..++.+... +++.|+++...|.+... .+.
T Consensus 84 ~~~le~~lA~l~g~~---------~~v~~~sG~~Ai~~al~al~~-----------~Gd~Vi~~~~~y~~~~~~~~~~~~ 143 (430)
T 3ri6_A 84 VEDLEQRLKNLTGAL---------GVLALGSGMAAISTAILTLAR-----------AGDSVVTTDRLFGHTLSLFQKTLP 143 (430)
T ss_dssp HHHHHHHHHHHHTCS---------EEEEESCHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchhHHHHHHHHHH
Confidence 344556788888875 357788889998877776533 67788889999988766 667
Q ss_pred HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeecccc
Q 038818 191 IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYA 270 (486)
Q Consensus 191 ~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g 270 (486)
..|+ +++.+|.+ |+++|+++|++. +.+|+++.++|++|.+.|+++|+++|+++|+++++|++|+
T Consensus 144 ~~G~---~~~~v~~~-------d~~~l~~ai~~~------t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~ 207 (430)
T 3ri6_A 144 SFGI---EVRFVDVM-------DSLAVEHACDET------TKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMT 207 (430)
T ss_dssp HTTC---EEEEECTT-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTS
T ss_pred HcCC---EEEEeCCC-------CHHHHHHhhCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCc
Confidence 8898 88888764 899999998653 4578899999999999999999999999999999999998
Q ss_pred chhccCccchhhhcCCCCCCceeeccccccCCC--CcceEEEeeCchHH---------HHHhcCCcccccCccCCCCCcc
Q 038818 271 GSACICPEFRHFIDGIEGADSFSLNAHKWFFTT--LDCCCLWVKNPNAL---------IKALSTNPEFLRNKASDSKQVV 339 (486)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p--~~~g~~~~~~~~~~---------~~~~~~~~~y~~~~~~~~~~~~ 339 (486)
.+....+. . .++|.++.+++|++++| ..+|+++++....+ .+.+.. ..|+....
T Consensus 208 ~~~~~~~~--~-----~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~-~~~i~~~~------- 272 (430)
T 3ri6_A 208 PPYLLEAK--R-----LGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGP-MAFLYKAR------- 272 (430)
T ss_dssp CTTTCCGG--G-----GTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGG-GHHHHHHH-------
T ss_pred ccccCChH--H-----cCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhch-hhHHHHHH-------
Confidence 66543221 1 26899999999999876 24555554433111 000000 00000000
Q ss_pred CCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCC----------------ee-
Q 038818 340 DYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRN----------------FA- 402 (486)
Q Consensus 340 ~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~----------------~~- 402 (486)
..+....+.....+.+|..++ |.+.+..++++..+++.++.+.|+++|+++.+..|. .+
T Consensus 273 --~~~~~~~g~~~~~~~a~l~l~--~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~ 348 (430)
T 3ri6_A 273 --KEVFQNLGPSLSPHNAYLQSL--GLETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGS 348 (430)
T ss_dssp --HTHHHHHCCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCS
T ss_pred --HHHHHhcCCCCCHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCce
Confidence 000001122234556666655 557788888999999999999999999988554333 34
Q ss_pred EEEEEee
Q 038818 403 VVCFRVL 409 (486)
Q Consensus 403 ~v~f~~~ 409 (486)
+++|.+.
T Consensus 349 ~lsf~l~ 355 (430)
T 3ri6_A 349 ILTFELE 355 (430)
T ss_dssp EEEEECS
T ss_pred EEEEEEC
Confidence 8888886
No 149
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.87 E-value=3.2e-20 Score=188.09 Aligned_cols=323 Identities=12% Similarity=0.085 Sum_probs=204.8
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCCC-cc-CCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCc
Q 038818 105 WMSSPAATELENIVMDWLGEMLKLPKSF-LF-SGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTH 182 (486)
Q Consensus 105 ~~~~~~~~~le~~~~~~l~~l~g~~~~~-~~-~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 182 (486)
|....+..++.+.+.+++++.+|.+... .. .+....++|+|+++++..++.+..+ +++.|++...+|
T Consensus 74 Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~-----------~gd~Vlv~~p~y 142 (425)
T 2r2n_A 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIIN-----------PGDNVLLDEPAY 142 (425)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCC-----------TTCEEEEESSCC
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCC-----------CCCEEEEeCCCc
Confidence 3334445678889999999999986410 00 0002689999999999877776543 567788899999
Q ss_pred hHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHH------HCCCccEEEEe-ecCCccccccCCch---HH
Q 038818 183 SALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDI------QAGLIPLFLCA-TVGTTAITTVDPLG---PL 252 (486)
Q Consensus 183 ~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~------~~g~~p~~vv~-~~gtt~~G~idpl~---~I 252 (486)
.++...++..|. +++.+|+++ + .+|+++|+++++... ..+..+.+|++ ..++|++|.+-|.+ +|
T Consensus 143 ~~~~~~~~~~g~---~~~~v~~~~--~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l 216 (425)
T 2r2n_A 143 SGTLQSLHPLGC---NIINVASDE--S-GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEI 216 (425)
T ss_dssp HHHHHHHGGGTC---EEEEECEET--T-EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHH
T ss_pred HHHHHHHHHcCC---EEEEeCcCC--C-CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHH
Confidence 999999999999 999999874 2 499999999986311 00112345544 67899999998755 99
Q ss_pred HHHHHHhCceEEeeccccchhccCccchhhhcCC--CCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccC
Q 038818 253 CDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGI--EGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRN 330 (486)
Q Consensus 253 ~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~--~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~ 330 (486)
+++|++||+++++|++|+.+.+....... +..+ ...+.+..+++|+++....+|+++.+++ ... .+.......
T Consensus 217 ~~~a~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~~-l~~-~l~~~~~~~-- 291 (425)
T 2r2n_A 217 YELARKYDFLIIEDDPYYFLQFNKFRVPT-FLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKP-LIE-RVILHIQVS-- 291 (425)
T ss_dssp HHHHHHTTCEEEEECTTGGGBSSSSCCCC-TGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEHH-HHH-HHHHHHHTT--
T ss_pred HHHHHHcCCEEEEECCcccccCCCCCCCC-ccccCCCCCEEEEccchhhccCccceEEEecCHH-HHH-HHHHHHHHh--
Confidence 99999999999999999764332111111 1111 1234667789999973335798888754 222 221100000
Q ss_pred ccCCCCCccCCCCccccCCCCCCchHHHH---HHHHhch----HHHHHHHHHHHHHHHHHHHHHhC-CCCeE-EecCCCe
Q 038818 331 KASDSKQVVDYKDWQITLSRRFRALKLWL---VLRSFGV----ANLRNFLRSHVRMAQLFQELVGG-DNRFE-IVAPRNF 401 (486)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~sr~~~~l~~~~---~l~~~g~----~g~~~~~~~~~~~a~~l~~~L~~-~~~~~-~~~~~~~ 401 (486)
+ . ....+..++ ++..++. +.++++.++..++++++.+.|++ +|++. +..+...
T Consensus 292 --------------~--~--~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g 353 (425)
T 2r2n_A 292 --------------T--L--HPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAG 353 (425)
T ss_dssp --------------T--C--SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBS
T ss_pred --------------c--C--CCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCce
Confidence 0 0 112222233 3333222 34556667777888899999987 57774 4433334
Q ss_pred eEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeEC-----CEeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 402 AVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVA-----GIYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 402 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-----~~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
..+.+.+.... ... +.+.+.+.+.|+.+..+..+. +..++|++++ ..++++|+++++.|.
T Consensus 354 ~~~~~~~~~~~----------~~~---~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~--~~~~~~i~~~~~~l~ 418 (425)
T 2r2n_A 354 MFLWIKVKGIN----------DVK---ELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFS--SASPEQMDVAFQVLA 418 (425)
T ss_dssp SEEEEEETTCS----------CCH---HHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECS--SCCHHHHHHHHHHHH
T ss_pred EEEEEEeCCCC----------CHH---HHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeC--CCCHHHHHHHHHHHH
Confidence 44555654311 001 124556667787554433332 2478999985 258889999999999
Q ss_pred HHHHHH
Q 038818 477 EKLDGI 482 (486)
Q Consensus 477 ~~~~~l 482 (486)
++++++
T Consensus 419 ~~l~~~ 424 (425)
T 2r2n_A 419 QLIKES 424 (425)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 988754
No 150
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.86 E-value=7.4e-20 Score=179.23 Aligned_cols=280 Identities=13% Similarity=0.098 Sum_probs=192.8
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCC
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGID 195 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g 195 (486)
.++++.+++++|.+.+ ..++|+|+++++..++... +++.|+++..+|.++...++..|+
T Consensus 54 ~~lr~~la~~~~~~~~-------~i~~t~G~~~~l~~~~~~~-------------~gd~vl~~~p~~~~~~~~~~~~g~- 112 (337)
T 3p1t_A 54 PRVMRKLAEHFSCPED-------NLMLVRGIDECFDRISAEF-------------SSMRFVTAWPGFDGYRARIAVSGL- 112 (337)
T ss_dssp HHHHHHHHHHHTSCGG-------GEEEESHHHHHHHHHHHHS-------------TTSEEEEESSSCSHHHHHHTTSCC-
T ss_pred HHHHHHHHHHhCcCHH-------HEEEeCCHHHHHHHHHHhc-------------CCCeEEEeCCCcHHHHHHHHHcCC-
Confidence 3456677888888765 6899999998887665543 345677888999999999999999
Q ss_pred CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhcc
Q 038818 196 PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACI 275 (486)
Q Consensus 196 ~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~ 275 (486)
+++.+|+++ ++.+|+++|+++. .+.+|+++.++|++|.+.|+++|.++|+++++ +++|++|+.+...
T Consensus 113 --~~~~v~~~~--~~~~d~~~l~~~~--------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~~~~~~ 179 (337)
T 3p1t_A 113 --RHFEIGLTD--DLLLDPNDLAQVS--------RDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSF 179 (337)
T ss_dssp --EEEEECBCT--TSSBCHHHHTTCC--------TTEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTGGGSSC
T ss_pred --EEEEecCCC--CCCCCHHHHHhhc--------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCChhhccc
Confidence 999999875 5799999998751 14578999999999999999999999999997 5669999764321
Q ss_pred CccchhhhcCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCc
Q 038818 276 CPEFRHFIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRA 354 (486)
Q Consensus 276 ~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~ 354 (486)
.+. .......+.+..+++|+++ .+..+|+++.+++ ... .+.....+ . ....
T Consensus 180 ~~~----~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~-~~~-~l~~~~~~--------------------~--~~~~ 231 (337)
T 3p1t_A 180 RAR----GLAYGENELVFRSFSKSYGLAGLRLGALFGPSE-LIA-AMKRKQWF--------------------C--NVGT 231 (337)
T ss_dssp SSS----CCCCBTTEEEEEESSSTTCCTTTCCEEEECCHH-HHH-HHHTTSCT--------------------T--CSCH
T ss_pred ccc----ccccCCCEEEEeeCchhccCcchheEEEEeCHH-HHH-HHHhhcCC--------------------C--CCCH
Confidence 111 1122345678889999997 5556787776443 332 22111000 0 1122
Q ss_pred hHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHH
Q 038818 355 LKLWLVLRSFG-VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLE 433 (486)
Q Consensus 355 l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~ 433 (486)
+...+....+. .+.+.+.+++..++++++.+.|+++ ++++. ++..+.+.+..... ..+.+
T Consensus 232 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~-----------------~~~~~ 292 (337)
T 3p1t_A 232 LDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL-GYRVA-SSEANFVLVENAAG-----------------ERTLR 292 (337)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBC-CCSSSEEEEECTTT-----------------HHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-cCEEC-CCCCeEEEEEcCCH-----------------HHHHH
Confidence 33333333332 2456777788888899999999887 77764 45556666654321 23455
Q ss_pred HHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 434 SINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 434 ~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
.+.++|+.+..+..+...+++|++++ +++++++++++|+++.+
T Consensus 293 ~l~~~gi~v~~g~~~~~~~~iRis~~----~~~~~~~l~~al~~~~~ 335 (337)
T 3p1t_A 293 FLRERGIQVKDAGQFGLHHHIRISIG----REEDNDRLLAALAEYSD 335 (337)
T ss_dssp HHHHTTEECEEGGGGTCCSEEEEECC----CHHHHHHHHHHHHHHTC
T ss_pred HHHHCCeEEEECccCCCCCeEEEecC----CHHHHHHHHHHHHHHhh
Confidence 66677875444433333578999984 57799999999988653
No 151
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.86 E-value=4.1e-20 Score=182.73 Aligned_cols=293 Identities=12% Similarity=0.012 Sum_probs=186.3
Q ss_pred HHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHH---HHH
Q 038818 115 ENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKA---AQI 191 (486)
Q Consensus 115 e~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a---~~~ 191 (486)
..++++++++++|.+. .++++|||+|+..++.+....- ++.+|+++...|++.... +..
T Consensus 50 ~~~l~~~la~~~~~~~---------~i~~~~g~~a~~~a~~~~~~~g---------~~~vvi~~~~~~~~~~~~~~~~~~ 111 (359)
T 3pj0_A 50 IEDFETKIAKILGKQS---------AVFFPSGTMAQQIALRIWADRK---------ENRRVAYHPLSHLEIHEQDGLKEL 111 (359)
T ss_dssp HHHHHHHHHHHHTCSE---------EEEESCHHHHHHHHHHHHHHHH---------TCCEEEECTTCHHHHSSTTHHHHH
T ss_pred HHHHHHHHHHHhCCCc---------EEEeCCHHHHHHHHHHHHHhcC---------CCcEEEEeccceeeehhcchHHHh
Confidence 3455677888888753 3677899999988888776541 333677777888776432 355
Q ss_pred cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccc-cccCCchHH---HHHHHHhCceEEeec
Q 038818 192 AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAI-TTVDPLGPL---CDIAKRYSIWVHVDA 267 (486)
Q Consensus 192 ~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~-G~idpl~~I---~~i~~~~g~~lhvD~ 267 (486)
.|. +++.+|.+ ++.+|+++|+++ .+ .+.+|+++.++|++ |.+.|++++ +++|++||+++|+|+
T Consensus 112 ~g~---~~~~v~~~---~~~~d~~~l~~~-~~------~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~ 178 (359)
T 3pj0_A 112 QQI---TPLLLGTA---NQLLTIDDIKSL-RE------PVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDG 178 (359)
T ss_dssp HCC---EEEECSCT---TSCCCHHHHHTC-SS------CCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred cCc---eEEecCCc---CCCcCHHHHHhc-cC------CceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEEC
Confidence 688 88888763 569999999987 21 24578888887777 688775555 999999999999999
Q ss_pred cccchhcc--CccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCcc
Q 038818 268 AYAGSACI--CPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQ 345 (486)
Q Consensus 268 a~g~~~~~--~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 345 (486)
+|..+... ........ ..+|.+++++||++++|.+ |+ ++.+++.......... .....
T Consensus 179 a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~~~~~~g-g~-~~~~~~l~~~~~~~~~-~~~~~-------------- 238 (359)
T 3pj0_A 179 ARLWEITPFYQKSAEEIC---ALFDSVYVSFYKGIGGIAG-AI-LAGNDDFVQEAKIWKR-RYGGD-------------- 238 (359)
T ss_dssp TTCGGGHHHHTCCHHHHH---TTCSEEEEESSSTTCCSSC-EE-EEECHHHHHHHHHHHH-HTTCC--------------
T ss_pred cchhcchhhhCCCHHHhh---ccCCEEEEeccccCCCcce-EE-EECCHHHHHHHHHHHH-HhCCC--------------
Confidence 98543311 11111111 3689999999999998855 44 4455544332211000 00000
Q ss_pred ccCCCCCC--chHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe-cCCCeeEEEEEeecCCCCCCCCCCcc
Q 038818 346 ITLSRRFR--ALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIV-APRNFAVVCFRVLPSASGLGDGKANE 422 (486)
Q Consensus 346 ~~~sr~~~--~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~~v~f~~~~~~~~~~~~~~~~ 422 (486)
..... +.....++.. ..+.+++..++++++.+.|+++|++++. .++..+.+.+++....
T Consensus 239 ---~~~~~~~~~a~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~---------- 300 (359)
T 3pj0_A 239 ---LISLYPYILSADYYFEK-----RIGKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSA---------- 300 (359)
T ss_dssp ---CSCCHHHHHHHHHHHHH-----HGGGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCH----------
T ss_pred ---cchhHHHHHHHHHHHHH-----HHHHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCcc----------
Confidence 00001 1111222221 1245566778899999999999999986 4566777777775431
Q ss_pred chHHHHHHHHHHHHhcCcEEEeeee--ECCEeEEEEEecCCC--CcHHHHHHHHHHHHHH
Q 038818 423 GANELNRKLLESINASGQLYVSHGM--VAGIYFIRFAVGATL--TEDRHVIAAWKVVQEK 478 (486)
Q Consensus 423 ~~~~~~~~l~~~l~~~g~~~~~~~~--~~~~~~lR~~~~~~~--tt~~did~~i~~l~~~ 478 (486)
......+.+.+.++|+.+..+.. ..+..++|+++.... .+.+++++.++.|.+.
T Consensus 301 --~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 301 --DEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp --HHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred --chhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 22345677788888975433322 246789999885433 4677788887777654
No 152
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.86 E-value=1.8e-20 Score=192.20 Aligned_cols=376 Identities=12% Similarity=0.068 Sum_probs=206.6
Q ss_pred CHHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCC
Q 038818 52 PIETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKS 131 (486)
Q Consensus 52 ~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~ 131 (486)
...+-.+.+...-..-........|+++.++.+. +. +.+.+...+......|...+...++ ++++++++|.+
T Consensus 19 ~~~~~~~~~~~~g~~~~~~~~~~~ylD~~~~~~~-~~-v~~a~~~~l~~~~~~y~~~~~~~~l----~~~la~~~~~~-- 90 (467)
T 2oqx_A 19 TRAYREEAIIKSGMNPFLLDSEDVFIDLLTDSGT-GA-VTQSMQAAMMRGDEAYSGSRSYYAL----AESVKNIFGYQ-- 90 (467)
T ss_dssp CHHHHHHHHHHTTSCGGGSCGGGCSEECSCCSSC-SC-CCHHHHHHTTSCCCCSSSCHHHHHH----HHHHHHHHCCS--
T ss_pred cHHHHHHHHHHcCCCceeccCCCeeEecccCCCc-HH-HHHHHHHHhccCcceeccCchhHHH----HHHHHHHhCcC--
Confidence 4555555554421111111122357777655433 33 3334444444333345555554444 45677777753
Q ss_pred CccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCC-eEEEecCCCchHH-HHHHHHcCCCCCCeEEE------e
Q 038818 132 FLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISR-LVVYGSDQTHSAL-QKAAQIAGIDPKNFRAI------K 203 (486)
Q Consensus 132 ~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~-~~a~~~~G~g~~~v~~v------~ 203 (486)
.+++|+|||+||..|+.+++....... |.++ +.|+++ ..|+.. .......|. .++.. +
T Consensus 91 -------~v~~t~~gt~A~~~al~~~~~~~~~~~---G~~~~d~Ii~~-~~h~~t~~~~~~~~~~---~~~~~~~~~~~~ 156 (467)
T 2oqx_A 91 -------YTIPTHQGRGAEQIYIPVLIKKREQEK---GLDRSKMVAFS-NYFFDTTQGHSQINGC---TVRNVYIKEAFD 156 (467)
T ss_dssp -------EEEEEC--CCSHHHHHHHHHHHHHHHH---CCCTTTCEEEE-SSCCHHHHHHHHHTTC---EEEECBCTTTTC
T ss_pred -------cEEEcCCcHHHHHHHHHHHhccccccC---CCCccceEEec-ccccccchhhhhccCc---ceeecccccccc
Confidence 579999999999999998875411111 1111 335555 578553 333344454 43332 2
Q ss_pred cCC--CCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccc-ccc---CCchHHHHHHHHhCceEEeeccccc-hhc--
Q 038818 204 TTK--SSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAI-TTV---DPLGPLCDIAKRYSIWVHVDAAYAG-SAC-- 274 (486)
Q Consensus 204 ~d~--~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~-G~i---dpl~~I~~i~~~~g~~lhvD~a~g~-~~~-- 274 (486)
.+. ..++.+|+++|+++|++.. ...+.+|+++.+++++ |.+ +++++|+++|++||+|+|+|++++. ...
T Consensus 157 ~~~~~~~~~~~d~~~Le~~i~~~~--~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~ 234 (467)
T 2oqx_A 157 TGVRYDFKGNFDLEGLERGIEEVG--PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFI 234 (467)
T ss_dssp TTSCCTTTTCBCHHHHHHHHHHHC--GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHH
T ss_pred CCCCCCccCCcCHHHHHHHHHhcC--CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhc
Confidence 210 0246899999999998631 0124478888888887 665 5689999999999999999988755 221
Q ss_pred ------cCc-cchhhh-cCCCCCCceeeccccccCCCCcceEEEeeCc---hHHHHHhcCCcccc-cCccCCCCCccCCC
Q 038818 275 ------ICP-EFRHFI-DGIEGADSFSLNAHKWFFTTLDCCCLWVKNP---NALIKALSTNPEFL-RNKASDSKQVVDYK 342 (486)
Q Consensus 275 ------~~~-~~~~~~-~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~---~~~~~~~~~~~~y~-~~~~~~~~~~~~~~ 342 (486)
... ...... .....+|++++++||+++.|.| |+++.+++ +.+... . .+. .... .
T Consensus 235 ~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~~~~~~~~~~~~-~---~~~~~~~~--------~- 300 (467)
T 2oqx_A 235 KQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCMKDDSFFDVYTEC-R---TLCVVQEG--------F- 300 (467)
T ss_dssp HHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSSC-EEEEECSGGGHHHHHHH-H---HHHHHTTS--------S-
T ss_pred ccccccccCccHHHHhhhhhccCCeEEEecccccCCCCc-eEEEecChhHHHHHHHH-H---HhhhccCC--------c-
Confidence 111 111110 0013578889999999988754 56666655 222211 1 111 0000 0
Q ss_pred CccccCCCCCCchHHHHHHHHhchHHH-HHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeec--CCCCCCCCC
Q 038818 343 DWQITLSRRFRALKLWLVLRSFGVANL-RNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLP--SASGLGDGK 419 (486)
Q Consensus 343 ~~~~~~sr~~~~l~~~~~l~~~g~~g~-~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~--~~~~~~~~~ 419 (486)
.+.+. ..+..+ .++...-.+.+ ++.+++..++++++.+.|+++ ++++. +.....+.+.+.. ... +
T Consensus 301 ---~~~~~-~~~~~~-~al~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~~~~~---~-- 368 (467)
T 2oqx_A 301 ---PTYGG-LEGGAM-ERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEI-GVVCQ-QAGGHAAFVDAGKLLPHI---P-- 368 (467)
T ss_dssp ---CCCCC-CCHHHH-HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT-TCCEE-EECSSCEEEEHHHHSTTS---C--
T ss_pred ---ccccc-hhhhHH-HHHHHhhHhhhhHHHHHHHHHHHHHHHHHHHHC-CCeee-cCCceEEEEechhhcccC---C--
Confidence 00000 011111 12221001122 234566678889999999887 78777 5455566666532 110 0
Q ss_pred CccchHHH-HHHHHHHH-HhcCcEEEeeeeE-------------CCEeEEEEEecCCC-CcHHHHHHHHHHHHHHHHHH
Q 038818 420 ANEGANEL-NRKLLESI-NASGQLYVSHGMV-------------AGIYFIRFAVGATL-TEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 420 ~~~~~~~~-~~~l~~~l-~~~g~~~~~~~~~-------------~~~~~lR~~~~~~~-tt~~did~~i~~l~~~~~~l 482 (486)
. .++ ..++.+.| .+.|+.+.....+ .+..++|+++. .. ++++||+++++.|+++++++
T Consensus 369 -~---~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~-~~~~t~e~i~~~~~~l~~~l~~~ 442 (467)
T 2oqx_A 369 -A---DQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIP-RATYTQTHMDFIIEAFKHVKENA 442 (467)
T ss_dssp -G---GGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCC-TTTSCHHHHHHHHHHHHHHHHSG
T ss_pred -c---ccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEec-CCCCCHHHHHHHHHHHHHHHhhh
Confidence 1 122 34567777 6778754432211 02368999984 45 78899999999999988754
No 153
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.86 E-value=1.7e-20 Score=191.24 Aligned_cols=321 Identities=12% Similarity=0.093 Sum_probs=194.0
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCe----------
Q 038818 104 NWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRL---------- 173 (486)
Q Consensus 104 ~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~---------- 173 (486)
.|.......++++.+.+|+.+.+|++.. ...+++|+|||+|+..++.+... +++
T Consensus 78 ~y~~~~g~~~lr~~ia~~l~~~~g~~~~-----~~~i~~t~G~t~al~~~~~~l~~-----------~gd~~~~~~~~~~ 141 (444)
T 3if2_A 78 NYSNPQGDSAFIDALVGFFNRHYDWNLT-----SENIALTNGSQNAFFYLFNLFGG-----------AFVNEHSQDKESK 141 (444)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCCCC-----GGGEEEESSHHHHHHHHHHHSSE-----------EEECC-------C
T ss_pred ccCCCCCCHHHHHHHHHHHHhhcCCCCC-----HHHEEEecCcHHHHHHHHHHHhC-----------CCccccccccccc
Confidence 4554555688999999999988886532 13799999999999888776532 222
Q ss_pred ----EEEec-CCCchHHHHHH------HHcCCCCCCeEEEecCCC-C--CcccCHHHHHHHHHHHHHCCCccEEEEeecC
Q 038818 174 ----VVYGS-DQTHSALQKAA------QIAGIDPKNFRAIKTTKS-S--SFTLTPESLQAAIDLDIQAGLIPLFLCATVG 239 (486)
Q Consensus 174 ----~v~~s-~~~H~s~~~a~------~~~G~g~~~v~~v~~d~~-~--~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~g 239 (486)
.|+++ ..+|.....++ ...|. .++.+|+++. + ++.+|+++|+++++... ..+.+|+++.+
T Consensus 142 g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~---~~~~~v~i~~p 215 (444)
T 3if2_A 142 SVDKSILLPLTPEYIGYSDVHVEGQHFAAVLP---HIDEVTHDGEEGFFKYRVDFEALENLPALKE---GRIGAICCSRP 215 (444)
T ss_dssp EEEEEEEESSSSCCGGGTTCCSSSCCEEECCC---EEEEEEETTEEEEEEEECCHHHHHTCHHHHT---TCEEEEEEESS
T ss_pred cccceEEEeCCCCccchhhcccccchhhccCc---eEEecccccccCccccCCCHHHHHHHHHhcC---CCceEEEeCCC
Confidence 45554 56666654432 22344 6777887641 1 25799999999865422 12557888889
Q ss_pred CccccccCC---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchH
Q 038818 240 TTAITTVDP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNA 316 (486)
Q Consensus 240 tt~~G~idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~ 316 (486)
+|++|.+-| +++|+++|++||+++|+|++|+.+.... .+..........+.++.++||++..+.++|+++.+. ..
T Consensus 216 ~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~-~l 293 (444)
T 3if2_A 216 TNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNI-IYSDAHLNWDNNTILCFSLSKIGLPGMRTGIIVADA-KV 293 (444)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCC-BCSCCCCCCCTTEEEEEESTTTTCGGGCCEEEECCH-HH
T ss_pred CCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCccccc-ccccccccCCCCEEEEechhhccCCCCceEEEEECH-HH
Confidence 999999988 8899999999999999999997532111 111111112356678889999855556778776543 33
Q ss_pred HHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHH----HHH-HHHHHHHHHHHHHHHHhC-C
Q 038818 317 LIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVAN----LRN-FLRSHVRMAQLFQELVGG-D 390 (486)
Q Consensus 317 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g----~~~-~~~~~~~~a~~l~~~L~~-~ 390 (486)
..........+. .....+...++...+.... ..+ +.++..++.+++.+.|.+ +
T Consensus 294 ~~~~~~~~~~~~---------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 352 (444)
T 3if2_A 294 IEAVSAMNAVVN---------------------LAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQAL 352 (444)
T ss_dssp HHHHHHHHHHHH---------------------SSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhcc---------------------CCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 221111000000 0112233333332221111 122 334445556666666644 3
Q ss_pred C--CeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeEC----------CEeEEEEEe
Q 038818 391 N--RFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVA----------GIYFIRFAV 458 (486)
Q Consensus 391 ~--~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~----------~~~~lR~~~ 458 (486)
+ ++++..+.....+.+.+..... ....+.+.+.++|+.+.++..+. +..++|+++
T Consensus 353 ~~~~~~~~~~~~g~~~~~~~~~~~~-------------~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~ 419 (444)
T 3if2_A 353 GDYPLMIHKPEGAIFLWLWFKDLPI-------------STLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSI 419 (444)
T ss_dssp SSSSEEEECCCBSSEEEEEETTCSS-------------CHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEES
T ss_pred ccCCceEecCCccEEEEEEcCCCCC-------------CHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEE
Confidence 4 4666544444455555543110 02356667777787544433221 126899998
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHHHhhc
Q 038818 459 GATLTEDRHVIAAWKVVQEKLDGILAT 485 (486)
Q Consensus 459 ~~~~tt~~did~~i~~l~~~~~~l~~~ 485 (486)
.. ++++|+++++.|.++++++..+
T Consensus 420 ~~---~~e~i~~~l~~l~~~~~~~~~~ 443 (444)
T 3if2_A 420 AA---DEQTLIDGIKVIGEVVRELYDN 443 (444)
T ss_dssp SS---CHHHHHHHHHHHHHHHHHHHTC
T ss_pred eC---CHHHHHHHHHHHHHHHHHHHcc
Confidence 53 7889999999999999887643
No 154
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.86 E-value=8.7e-21 Score=185.55 Aligned_cols=279 Identities=13% Similarity=0.099 Sum_probs=181.2
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHH----HHc
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAA----QIA 192 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~----~~~ 192 (486)
++++.+++++|.+ . .+++++||+|+..++.+... +++.|+++..+|.+....+ +..
T Consensus 2 ~l~~~la~~~g~~-~--------~i~~~sG~~a~~~~~~~~~~-----------~g~~v~~~~~~~~~~~~~~~~~~~~~ 61 (331)
T 1pff_A 2 ALEGKIAKLEHAE-A--------CAATASGMGAIAASVWTFLK-----------AGDHLISDDCLYGCTHALFEHQLRKF 61 (331)
T ss_dssp HHHHHHHHHHTCS-E--------EEEESSHHHHHHHHHHHHCC-----------TTCEEEEESCCCHHHHHHHHTHHHHT
T ss_pred hHHHHHHHHhCCC-e--------EEEeCChHHHHHHHHHHhcC-----------CCCEEEEcCCCcchHHHHHHHHHHhc
Confidence 3557788888876 2 45666669998877776532 5667888899999876665 457
Q ss_pred CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHH-hCceEEeeccccc
Q 038818 193 GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKR-YSIWVHVDAAYAG 271 (486)
Q Consensus 193 G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~-~g~~lhvD~a~g~ 271 (486)
|+ +++.+|. +|+++|+++++++ +.+|++++++|++|.+.|+++|.++|++ +|+++++|++|+.
T Consensus 62 g~---~~~~~~~-------~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~ 125 (331)
T 1pff_A 62 GV---EVDFIDM-------AVPGNIEKHLKPN------TRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFAS 125 (331)
T ss_dssp TC---EEEEECT-------TSTTHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTH
T ss_pred CC---EEEEeCC-------CCHHHHHHhhcCC------CeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcc
Confidence 88 8888864 3778898888643 4578889999999999999999999999 9999999999987
Q ss_pred hhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCC
Q 038818 272 SACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLS 349 (486)
Q Consensus 272 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~s 349 (486)
+....+. . .++|.++.++||++++|.+ +|+++.++++...........|. +
T Consensus 126 ~~~~~~~-~------~~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~~~~~~~--------------------~ 178 (331)
T 1pff_A 126 PILTNPL-D------LGVDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQGIKDIT--------------------G 178 (331)
T ss_dssp HHHCCGG-G------GTCSEEEEETTTTTSSSSSCCCEEEEECHHHHHHHHHTCCCCCC--------------------C
T ss_pred cccCChh-h------cCCcEEEEECccccCCCCCceEEEEEeCcHHHHHHHHHHHHhhc--------------------C
Confidence 6543321 1 2689999999999998876 78887776344332211111100 0
Q ss_pred CCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC--------------CeEEecC---CCeeEEEEEeecCC
Q 038818 350 RRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDN--------------RFEIVAP---RNFAVVCFRVLPSA 412 (486)
Q Consensus 350 r~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~--------------~~~~~~~---~~~~~v~f~~~~~~ 412 (486)
.....+..|..++.+ +.+....++..++++.+.+.|++.+ ++++..+ ...++++|.+..
T Consensus 179 ~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-- 254 (331)
T 1pff_A 179 AIISPHDAWLITRGT--LTLDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDG-- 254 (331)
T ss_dssp CCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS--
T ss_pred CCCCHHHHHHHHcCc--chHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC--
Confidence 011233444433332 2334444555555666666554432 3332211 135678887642
Q ss_pred CCCCCCCCccchHHHHHHHHHHHHhcCcEEEeee------------------------eECC--EeEEEEEecCCCCcHH
Q 038818 413 SGLGDGKANEGANELNRKLLESINASGQLYVSHG------------------------MVAG--IYFIRFAVGATLTEDR 466 (486)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~------------------------~~~~--~~~lR~~~~~~~tt~~ 466 (486)
...+.+.+.+.|+...... ...+ .+++|+++. ..++++
T Consensus 255 ---------------~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~-~~~t~~ 318 (331)
T 1pff_A 255 ---------------LEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVG-CENVQD 318 (331)
T ss_dssp ---------------HHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECC-SSCHHH
T ss_pred ---------------HHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEe-cCCHHH
Confidence 1245556666776321110 0011 468999995 578888
Q ss_pred HHHHHHHHHHHH
Q 038818 467 HVIAAWKVVQEK 478 (486)
Q Consensus 467 did~~i~~l~~~ 478 (486)
+|++++++|+++
T Consensus 319 ~i~~l~~~l~~~ 330 (331)
T 1pff_A 319 IIDDLKQALDLV 330 (331)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHHh
Confidence 999999998753
No 155
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.86 E-value=1.4e-20 Score=191.97 Aligned_cols=309 Identities=12% Similarity=0.004 Sum_probs=190.9
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH-HHH
Q 038818 109 PAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA-LQK 187 (486)
Q Consensus 109 ~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-~~~ 187 (486)
+....+|...++++++++|.+.. .++++|||+||..++.+++. +++.|+++..+|.+ +..
T Consensus 87 ~~~~~~e~~a~~~la~~~g~~~~--------~v~~~sGs~a~~~a~~~~~~-----------~Gd~Vl~~~~~~~~~~~~ 147 (447)
T 3h7f_A 87 EHVDVVENLARDRAKALFGAEFA--------NVQPHSGAQANAAVLHALMS-----------PGERLLGLDLANGGHLTH 147 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEE--------ECCCSSHHHHHHHHHHHHCC-----------TTCEEEEECGGGTCCGGG
T ss_pred HHHHHHHHHHHHHHHHHcCCCce--------EEEeCCHHHHHHHHHHHhcC-----------CCCEEEecCcccccccch
Confidence 33445665555999999998642 34478889999888777643 56778888888755 211
Q ss_pred H--HHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEe
Q 038818 188 A--AQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHV 265 (486)
Q Consensus 188 a--~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhv 265 (486)
. ....|.+. .++.+++++ +++.+|+++|++++++.. |.+|+++.+.++++. |+++|+++|++||+++|+
T Consensus 148 ~~~~~~~g~~~-~~~~~~~~~-~~~~~d~~~l~~~i~~~~-----~~~i~~~~~~~~~~~--~l~~i~~l~~~~g~lli~ 218 (447)
T 3h7f_A 148 GMRLNFSGKLY-ENGFYGVDP-ATHLIDMDAVRATALEFR-----PKVIIAGWSAYPRVL--DFAAFRSIADEVGAKLLV 218 (447)
T ss_dssp TCTTSHHHHSS-EEEEECCCT-TTCSCCHHHHHHHHHHHC-----CSEEEEECSSCCSCC--CHHHHHHHHHHHTCEEEE
T ss_pred hhhhhhcCCee-EEEEcCcCc-ccCCcCHHHHHHHHHhcC-----CeEEEEcCCCCCCcc--CHHHHHHHHHHcCCEEEE
Confidence 1 11222200 455666664 357899999999997642 336666667676655 999999999999999999
Q ss_pred eccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCcc
Q 038818 266 DAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQ 345 (486)
Q Consensus 266 D~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 345 (486)
|++|+.+.......... ++.+|.++.++||++++|.+ |+++.+++ ..........++..
T Consensus 219 Dea~~~g~~~~g~~~~~---~~~~di~~~s~sK~l~G~~g-G~i~~~~~-~~~~l~~~~~~~~~---------------- 277 (447)
T 3h7f_A 219 DMAHFAGLVAAGLHPSP---VPHADVVSTTVHKTLGGGRS-GLIVGKQQ-YAKAINSAVFPGQQ---------------- 277 (447)
T ss_dssp ECTTTHHHHHTTSSCCS---TTTCSEEEEESSGGGCCCSC-EEEEECGG-GHHHHHHHHTTTTC----------------
T ss_pred ECCchhhhhcCCCCCCC---CCCCcEEEecCCcCCCCCCe-EEEEECHH-HHHHHhhhcCCccc----------------
Confidence 99986544332221111 24689999999999988765 77776653 22211110001110
Q ss_pred ccCCCC-CCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC----CCeEEecC-CCeeEEEEEeecCCCCCCCCC
Q 038818 346 ITLSRR-FRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGD----NRFEIVAP-RNFAVVCFRVLPSASGLGDGK 419 (486)
Q Consensus 346 ~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~ 419 (486)
.+-. ....++..++.....++++++.++..++++++.+.|++. ++++++.+ ...+.+.+.+.+...
T Consensus 278 --~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------ 349 (447)
T 3h7f_A 278 --GGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPL------ 349 (447)
T ss_dssp --SSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSSC------
T ss_pred --CCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCCCC------
Confidence 0000 012333444544445578889999999999999999876 57888753 344555655543210
Q ss_pred CccchHHHHHHHHHHHHhcCcEEEe---ee---eECCEeEEEEEecC---CCCcHHHHHHHHHHHHHHHHH
Q 038818 420 ANEGANELNRKLLESINASGQLYVS---HG---MVAGIYFIRFAVGA---TLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 420 ~~~~~~~~~~~l~~~l~~~g~~~~~---~~---~~~~~~~lR~~~~~---~~tt~~did~~i~~l~~~~~~ 481 (486)
. ...+.+.+.+.|+.+.. +. ......++|++... ...+++|++++++.|.+++++
T Consensus 350 ---~----~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~~ 413 (447)
T 3h7f_A 350 ---D----GQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALAT 413 (447)
T ss_dssp ---C----HHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHHS
T ss_pred ---C----HHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 0 12334444455764321 11 11224579998632 125788999999999988754
No 156
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.86 E-value=1.5e-20 Score=188.56 Aligned_cols=325 Identities=12% Similarity=0.040 Sum_probs=200.3
Q ss_pred HHHHHHHh-hcCC-CccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCc--ceEEcCCchHHHHHHHHHHHHHHHHH
Q 038818 89 FLGEMLSS-GFNV-VGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTG--GGVIQGTTCEAILCTLAAARDQILNE 164 (486)
Q Consensus 89 ~~~~~l~~-~~n~-~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~--~~~~t~ggt~a~~~al~~a~~~~~~~ 164 (486)
.+.+.+.. .+.. ....|...+...++.+.+.+++.+..+.+.. .. ..++|+|||+|+..++...... .
T Consensus 48 ~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~-----~~~~~i~~t~g~~~a~~~~~~~~~~~--~- 119 (397)
T 3fsl_A 48 AVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLK-----QQRVATIQTLGGSGALKVGADFLKRY--F- 119 (397)
T ss_dssp HHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH-----TTCEEEEEESHHHHHHHHHHHHHHHH--C-
T ss_pred HHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCccccc-----ccceEEEEcCCcHHHHHHHHHHHHhc--C-
Confidence 34455554 4443 2345555556678888888887665442101 12 4799999999998775433211 0
Q ss_pred ccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 165 IGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 165 ~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
+++.|+++..+|.++...++..|. +++.+|++.++++.+|+++|++++++. .....+++.+.++|++|
T Consensus 120 ------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~~~~p~nptG 187 (397)
T 3fsl_A 120 ------PESGVWVSDPTWENHVAIFAGAGF---EVSTYPWYDEATNGVRFNDLLATLKTL---QAGSIVLLHPCCHNPTG 187 (397)
T ss_dssp ------TTCCEEEESSCCHHHHHHHHHTTC---CEEEECCEETTTTEECHHHHHHHHTTC---CTTCEEEECSSSCTTTC
T ss_pred ------CCCeEEEeCCCchhHHHHHHHcCC---ceEEEeeeeccCCcCcHHHHHHHHHhC---CCCCEEEEeCCCCCCCC
Confidence 566788889999999999999999 999999832236799999999998742 12245788889999999
Q ss_pred cc---CCchHHHHHHHHhCceEEeeccccchhccC-ccchhh--hcCCCCCCceeeccccccCC-CCcceEEEe--eCch
Q 038818 245 TV---DPLGPLCDIAKRYSIWVHVDAAYAGSACIC-PEFRHF--IDGIEGADSFSLNAHKWFFT-TLDCCCLWV--KNPN 315 (486)
Q Consensus 245 ~i---dpl~~I~~i~~~~g~~lhvD~a~g~~~~~~-~~~~~~--~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~--~~~~ 315 (486)
.+ +++++|+++|++||+++++|++|+.+.... ...... +.+...-..+..+++|.++. ...+|++++ .++.
T Consensus 188 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~~~~~ 267 (397)
T 3fsl_A 188 ADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAE 267 (397)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEECSSHH
T ss_pred cCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEecCCHH
Confidence 99 556799999999999999999997654321 111111 11122334667788999984 445788775 3443
Q ss_pred HHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhc--------hHHHHHHHHHHHHHHHHHHHHH
Q 038818 316 ALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFG--------VANLRNFLRSHVRMAQLFQELV 387 (486)
Q Consensus 316 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g--------~~g~~~~~~~~~~~a~~l~~~L 387 (486)
.+.+.......+.... .. ....+...++...+. .+.++++.++..++++++.+.|
T Consensus 268 ~~~~~~~~~~~~~~~~--------------~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 330 (397)
T 3fsl_A 268 AAGRVLGQLKATVRRN--------------YS---SPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVL 330 (397)
T ss_dssp HHHHHHHHHHHHHHTT--------------TS---SCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc--------------cC---CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3322211100000000 00 011222222222222 4557778888889999999999
Q ss_pred hCCC---CeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCc
Q 038818 388 GGDN---RFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTE 464 (486)
Q Consensus 388 ~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt 464 (486)
++++ ++++.. +..+.+.|.-.+ . +.+.+.+.++|+. +.+. + |+++.. . +
T Consensus 331 ~~~~~~~~~~~~~-~~~~~~~~~~~~--------------~---~~~~~~l~~~gi~-v~~g---~----Ris~~~-~-~ 382 (397)
T 3fsl_A 331 STEMPERNFDYLL-NQRGMFSYTGLS--------------A---AQVDRLREEFGVY-LIAS---G----RMCVAG-L-N 382 (397)
T ss_dssp HHHCTTSCCTHHH-HCCSSEEECCCC--------------H---HHHHHHHHTTCEE-CCTT---C----EEEGGG-C-C
T ss_pred HhcCCCCCceeec-CCceEEEecCCC--------------H---HHHHHHHHhCCEE-ECCC---C----eEEEEe-c-C
Confidence 8764 565442 333444431111 1 2345556667764 3332 1 899853 3 4
Q ss_pred HHHHHHHHHHHHHH
Q 038818 465 DRHVIAAWKVVQEK 478 (486)
Q Consensus 465 ~~did~~i~~l~~~ 478 (486)
+++|+++++.|+++
T Consensus 383 ~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 383 TANVQRVAKAFAAV 396 (397)
T ss_dssp TTTHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHhh
Confidence 45799999999875
No 157
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.86 E-value=7e-20 Score=186.90 Aligned_cols=307 Identities=11% Similarity=0.008 Sum_probs=199.2
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCc
Q 038818 103 FNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTH 182 (486)
Q Consensus 103 ~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 182 (486)
..|...+...++++.+.+|+. .|++.. ....++|+|+++++..+ ..... +++.|+++..+|
T Consensus 105 ~~y~~~~g~~~lr~~ia~~~~--~g~~~~-----~~~i~~t~G~~~al~~~-~~l~~-----------~gd~Vl~~~p~~ 165 (449)
T 3qgu_A 105 SGYGAEQGQGALREAVASTFY--GHAGRA-----ADEIFISDGSKCDIARI-QMMFG-----------SKPTVAVQDPSY 165 (449)
T ss_dssp CCSTTTTCCHHHHHHHHHHHH--TTTTCC-----GGGEEEESCHHHHHHHH-HHHHC-----------SSSCEEEEESCC
T ss_pred CCCCCCCCcHHHHHHHHHHHH--cCCCCC-----HHHEEEccCHHHHHHHH-HHHhC-----------CCCEEEEcCCCC
Confidence 345444556788888888877 554322 12789999999887654 33221 566788899999
Q ss_pred hHHHHHHHHcCCCCCC----------eEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---c
Q 038818 183 SALQKAAQIAGIDPKN----------FRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---L 249 (486)
Q Consensus 183 ~s~~~a~~~~G~g~~~----------v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l 249 (486)
.++..+++..|. + ++.+|++.++.+..|++++ ..+.+|+++.++|++|.+-| +
T Consensus 166 ~~~~~~~~~~g~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~v~l~~p~NPtG~~~~~~~l 231 (449)
T 3qgu_A 166 PVYVDTSVMMGM---TGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----------KRTDIIFFCSPNNPTGAAATRAQL 231 (449)
T ss_dssp THHHHHHHHHTC---SCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----------CCCSEEEEESSCTTTCCCCCHHHH
T ss_pred hhHHHHHHHcCC---cccccccccceeEEEecccccCCcCChhHc-----------CCCCEEEEeCCCCCCCCcCCHHHH
Confidence 999999999998 7 9999998644455554332 12346777799999999865 8
Q ss_pred hHHHHHHHHhCceEEeeccccchhccCccchh--hhcCCCCCCceeeccccccC-CCCcceEEEeeCchHH------HHH
Q 038818 250 GPLCDIAKRYSIWVHVDAAYAGSACICPEFRH--FIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNAL------IKA 320 (486)
Q Consensus 250 ~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~--~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~------~~~ 320 (486)
++|+++|++||+++++|++|+++......... .+.+....+.+..+++|+++ ....+|+++.+++..- ...
T Consensus 232 ~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~ 311 (449)
T 3qgu_A 232 TELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHAD 311 (449)
T ss_dssp HHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTTCBCTTSCBHHHH
T ss_pred HHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHHHHhhhhhhHHHH
Confidence 88899999999999999999875432111111 11112345677889999998 5567898887654210 000
Q ss_pred hcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEec
Q 038818 321 LSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFG---VANLRNFLRSHVRMAQLFQELVGGDNRFEIVA 397 (486)
Q Consensus 321 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 397 (486)
+.....+. ......+...++...+. .+.++++.++..++++++.+.|+++ ++++..
T Consensus 312 ~~~~~~~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 370 (449)
T 3qgu_A 312 WNRVMTTC--------------------FNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM-GFSVYG 370 (449)
T ss_dssp HHHHHHHS--------------------CCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEE
T ss_pred HHHHhhcc--------------------cCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeeC
Confidence 00000000 00123344444444443 3567788889999999999999987 788775
Q ss_pred CCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhc-CcEEEeeeeE--CCEeEEEEEecCCCCcHHHHHHHHHH
Q 038818 398 PRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINAS-GQLYVSHGMV--AGIYFIRFAVGATLTEDRHVIAAWKV 474 (486)
Q Consensus 398 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~--~~~~~lR~~~~~~~tt~~did~~i~~ 474 (486)
+.....+.+.+.+. + ..++.+.|.++ |+.+.++..+ .+..++|+++. .++++|+++++.
T Consensus 371 ~~~~~~~~~~~~~~-------------~--~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~---~~~e~i~~~l~~ 432 (449)
T 3qgu_A 371 GDDAPYIWVGFPGK-------------P--SWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAF---GSRENILEAVRR 432 (449)
T ss_dssp SSSSSEEEEECTTS-------------C--HHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC---SCHHHHHHHHHH
T ss_pred CCCeeEEEEECCCC-------------C--HHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEec---CCHHHHHHHHHH
Confidence 54455666655411 0 23456566554 7754433322 23578999974 378899999999
Q ss_pred HHHHHHH
Q 038818 475 VQEKLDG 481 (486)
Q Consensus 475 l~~~~~~ 481 (486)
|++++++
T Consensus 433 l~~~~~~ 439 (449)
T 3qgu_A 433 FKEAYGK 439 (449)
T ss_dssp HHHHHC-
T ss_pred HHHHHHh
Confidence 9988754
No 158
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.85 E-value=3.2e-20 Score=186.17 Aligned_cols=290 Identities=13% Similarity=0.036 Sum_probs=183.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.....++.+++++++|.+.+ .+++|+|||+|+..++.+++... + ++.+|+.+...|.+...++..
T Consensus 86 ~~~~~~l~~~la~~~~~~~~-------~v~~~~gg~~a~~~al~~~~~~~--~------~~~vi~~~~~y~~~~~~~~~~ 150 (395)
T 1vef_A 86 TPMRGEFYRTLTAILPPELN-------RVFPVNSGTEANEAALKFARAHT--G------RKKFVAAMRGFSGRTMGSLSV 150 (395)
T ss_dssp CHHHHHHHHHHHHTSCTTEE-------EEEEESSHHHHHHHHHHHHHHHH--S------CCEEEEETTCCCCSSHHHHHT
T ss_pred CHHHHHHHHHHHHhcCCCcC-------EEEEcCcHHHHHHHHHHHHHHHh--C------CCeEEEEcCCcCCCchhhhhh
Confidence 34566778889999887544 68999999999998888765321 0 344555554455566666666
Q ss_pred cCCCC---------CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHHHHHH
Q 038818 192 AGIDP---------KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCDIAKR 258 (486)
Q Consensus 192 ~G~g~---------~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~i~~~ 258 (486)
.|... ..+..+| ..|+++|+++|++. +.+|+++..++++|.+.| +++|+++|++
T Consensus 151 ~g~~~~~~~~~p~~~~~~~~~-------~~d~~~l~~~i~~~------~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~ 217 (395)
T 1vef_A 151 TWEPKYREPFLPLVEPVEFIP-------YNDVEALKRAVDEE------TAAVILEPVQGEGGVRPATPEFLRAAREITQE 217 (395)
T ss_dssp CCCHHHHGGGCSCSSCEEEEC-------TTCHHHHHHHCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHHHH
T ss_pred cCCcccccccCCCCCCeeEeC-------CCcHHHHHHHhccC------EEEEEEeCccCCCCccCCCHHHHHHHHHHHHH
Confidence 66510 0123332 24899999988642 456777777788998877 9999999999
Q ss_pred hCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCc
Q 038818 259 YSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQV 338 (486)
Q Consensus 259 ~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~ 338 (486)
||+++|+|++|+++......+.....++ ..|.+ ++||+++++.++|+++++++ .. +.+... .+
T Consensus 218 ~~~~li~Dea~~~~~~~g~~~~~~~~~~-~~d~~--s~sK~~~~g~~~G~~~~~~~-~~-~~l~~~-~~----------- 280 (395)
T 1vef_A 218 KGALLILDEIQTGMGRTGKRFAFEHFGI-VPDIL--TLAKALGGGVPLGVAVMREE-VA-RSMPKG-GH----------- 280 (395)
T ss_dssp HTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEE--EECGGGGTTSSCEEEEEEHH-HH-HTSCTT-SS-----------
T ss_pred cCCEEEEEecccCCccCCchhHhhhcCC-CCCEE--EEcccccCCCceEEEEehHH-HH-hhhccC-Cc-----------
Confidence 9999999999985321111111111122 46766 45999998888999998765 32 222110 00
Q ss_pred cCCCCccccCCCCCCchH---HHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCC--eEEecCCCeeEEEEEeecCCC
Q 038818 339 VDYKDWQITLSRRFRALK---LWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNR--FEIVAPRNFAVVCFRVLPSAS 413 (486)
Q Consensus 339 ~~~~~~~~~~sr~~~~l~---~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~--~~~~~~~~~~~v~f~~~~~~~ 413 (486)
. .+-....+. +..+++.+.. .++.++..++++++.+.|++++. +... ++..+++.+.+...
T Consensus 281 ------~--~~~~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~g~~~~~~~~~~-- 346 (395)
T 1vef_A 281 ------G--TTFGGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPSPKIREV-RGMGLMVGLELKEK-- 346 (395)
T ss_dssp ------C--CSSTTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCCTTEEEE-EEETTEEEEEESSC--
T ss_pred ------C--CCcCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhcCceEEE-EEEEEEEEEEEcCh--
Confidence 0 000112233 2333443322 34677888899999999988642 2111 22345667766431
Q ss_pred CCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 414 GLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 414 ~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
..++.+.|. ++|+.+ .+. +..++|+++ +..+++++++++++.|++++
T Consensus 347 --------------~~~l~~~l~~~~gi~v-~~~---~~~~iRi~~-~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 347 --------------AAPYIARLEKEHRVLA-LQA---GPTVIRFLP-PLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp --------------SHHHHHHHHHHHCEEC-EES---STTEEEECC-CTTCCHHHHHHHHHHHHHHH
T ss_pred --------------HHHHHHHHHHHCCeEE-ecC---CCCEEEEeC-CCCCCHHHHHHHHHHHHHHh
Confidence 134566666 678743 332 356899997 46788899999999998764
No 159
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.76 E-value=3.2e-23 Score=207.91 Aligned_cols=330 Identities=11% Similarity=0.045 Sum_probs=211.3
Q ss_pred HHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccC
Q 038818 90 LGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGREN 169 (486)
Q Consensus 90 ~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~ 169 (486)
+.+.+...+......|... ..++++.+.+|+++.+|.+.+. ...++|+||++|+..++.+...
T Consensus 49 v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~-----~~v~~~~g~~~a~~~~~~~~~~---------- 111 (392)
T 3b1d_A 49 VKQAIHDYAEQLVYGYTYA--SDELLQAVLDWEKSEHQYSFDK-----EDIVFVEGVVPAISIAIQAFTK---------- 111 (392)
Confidence 4444444443333334322 6788888999999888853221 2689999999999888777643
Q ss_pred CCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCC-CCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC
Q 038818 170 ISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTK-SSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP 248 (486)
Q Consensus 170 ~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~-~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp 248 (486)
++..|++...+|.++..+++..|. +++.+|.+. ++++.+|+++|++++++.. +.+|+++.++|++|.+-|
T Consensus 112 -~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~g~~~~d~~~l~~~l~~~~-----~~~v~~~~~~nptG~~~~ 182 (392)
T 3b1d_A 112 -EGEAVLINSPVYPPFARSVRLNNR---KLVSNSLKEENGLFQIDFEQLENDIVEND-----VKLYLLCNPHNPGGRVWE 182 (392)
Confidence 456688888999999999999998 899999853 2346799999999987321 235667889999999854
Q ss_pred ---chHHHHHHHHhCceEEeeccccchhccCccchhhh---cCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHHh
Q 038818 249 ---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFI---DGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKAL 321 (486)
Q Consensus 249 ---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~---~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~ 321 (486)
+++|+++|++||+++++|++|+.+........... ......+.+..+++|+++ ....+|+++++++.......
T Consensus 183 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 262 (392)
T 3b1d_A 183 REVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFK 262 (392)
Confidence 99999999999999999999987543221111111 011134467788999997 45578888876653332111
Q ss_pred cCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEecCCC
Q 038818 322 STNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGG-DNRFEIVAPRN 400 (486)
Q Consensus 322 ~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~~ 400 (486)
.....+ ++..........+..++. .+.+.++++.++..++++++.+.|++ +|++++. ++.
T Consensus 263 ~~~~~~-----------------~~~~~~~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~ 323 (392)
T 3b1d_A 263 HQQLVN-----------------NHHEVSSLGYIATETAYR-YGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVM-KPQ 323 (392)
Confidence 111101 000000111111222222 13456777788888899999999987 7788765 444
Q ss_pred eeEEE-EEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 401 FAVVC-FRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 401 ~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
.+.+. +.+.... ....++.+.|. ++|+.+..+..+. +..++|++++. ++++|+++++.|.
T Consensus 324 ~~~~~~i~~~~~~-------------~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~---~~e~i~~~l~~l~ 387 (392)
T 3b1d_A 324 GTYLIWLDFSDYG-------------LTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAA---PKSLVEEICKRIV 387 (392)
Confidence 45544 4443210 11235666665 5687544433332 46789999853 4679999999998
Q ss_pred HHHH
Q 038818 477 EKLD 480 (486)
Q Consensus 477 ~~~~ 480 (486)
++++
T Consensus 388 ~~l~ 391 (392)
T 3b1d_A 388 CCLP 391 (392)
Confidence 7754
No 160
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.85 E-value=7.1e-20 Score=185.17 Aligned_cols=253 Identities=13% Similarity=0.112 Sum_probs=166.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHH---
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAA--- 189 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~--- 189 (486)
....++++.+++++|.+. .+++++||+|+..++.+... +++.|+++...|.+....+
T Consensus 58 ~~~~~l~~~la~~~g~~~---------~v~~~sGt~A~~~~l~~~~~-----------~gd~vi~~~~~~~~~~~~~~~~ 117 (421)
T 2ctz_A 58 PTVDVLEKRLAALEGGKA---------ALATASGHAAQFLALTTLAQ-----------AGDNIVSTPNLYGGTFNQFKVT 117 (421)
T ss_dssp HHHHHHHHHHHHHHTCSE---------EEEESSHHHHHHHHHHHHCC-----------TTCEEEECSCCCHHHHHHHHTH
T ss_pred hHHHHHHHHHHHHhCCCc---------eEEecCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHHHHHHHH
Confidence 334456667888888752 36667779999888776532 5678889999999877765
Q ss_pred -HHcCCCCCCeEEE-ecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeec
Q 038818 190 -QIAGIDPKNFRAI-KTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDA 267 (486)
Q Consensus 190 -~~~G~g~~~v~~v-~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~ 267 (486)
+..|+ +++.+ +.+ |+++|+++|++. +.+|+++.++|++|.+.|+++|+++|+++|+++|+|+
T Consensus 118 ~~~~g~---~~~~~~~~~-------d~~~l~~~i~~~------~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~ 181 (421)
T 2ctz_A 118 LKRLGI---EVRFTSREE-------RPEEFLALTDEK------TRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDN 181 (421)
T ss_dssp HHHTTC---EEEECCTTC-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEEC
T ss_pred HHHcCC---EEEEECCCC-------CHHHHHHhhccC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEEC
Confidence 67788 88887 542 899999988753 4578899999999999999999999999999999999
Q ss_pred cc-cchhccCccchhhhcCCCCCCceeeccccccCCCCc-ceEEEeeC--chH----HHHHhcCCcccccCccCCCCCcc
Q 038818 268 AY-AGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD-CCCLWVKN--PNA----LIKALSTNPEFLRNKASDSKQVV 339 (486)
Q Consensus 268 a~-g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~~~--~~~----~~~~~~~~~~y~~~~~~~~~~~~ 339 (486)
+| +.+.. ..... .++|+++.++||++++|.. .|.+++.+ ..+ +.......++|............
T Consensus 182 ~~~~~g~~-~~~~~------~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~ 254 (421)
T 2ctz_A 182 TFGMGGYL-LRPLA------WGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGEL 254 (421)
T ss_dssp GGGGGGTS-CCGGG------GTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGG
T ss_pred Cccccccc-CCccc------cCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchh
Confidence 99 65432 11111 2689999999999998763 67676652 221 11111111111100000000000
Q ss_pred CCC---Cc--cccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEec-C---------------
Q 038818 340 DYK---DW--QITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVA-P--------------- 398 (486)
Q Consensus 340 ~~~---~~--~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~--------------- 398 (486)
.+. .+ ....+.....+.+|+.++ +.+.+..++++..++++++.+.|+++|+++++. +
T Consensus 255 ~~~~~~r~~~~~~~g~~~~~~~a~~~~~--~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~ 332 (421)
T 2ctz_A 255 AFIVKARVDGLRDQGQALGPFEAWVVLL--GMETLSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYF 332 (421)
T ss_dssp HHHHHHHHTHHHHHCCCCCHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHc--CcchHHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhc
Confidence 000 00 001222334555666555 345566778888899999999999999998763 2
Q ss_pred --CCeeEEEEEeec
Q 038818 399 --RNFAVVCFRVLP 410 (486)
Q Consensus 399 --~~~~~v~f~~~~ 410 (486)
...++++|.+.+
T Consensus 333 ~~~~g~ivsf~l~~ 346 (421)
T 2ctz_A 333 KGKPGAVLTFGLKG 346 (421)
T ss_dssp TTCCCSEEEEEETT
T ss_pred cCCCceEEEEEeCC
Confidence 235688998863
No 161
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.85 E-value=5.3e-20 Score=185.34 Aligned_cols=233 Identities=12% Similarity=0.085 Sum_probs=167.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH-
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ- 190 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~- 190 (486)
.....++.+++++++|.+ ..++++||++|+..++.+... +++.|+++...|.+....+.
T Consensus 80 ~p~~~~l~~~la~~~g~~---------~~~~~~sG~~Ai~~al~~l~~-----------~Gd~Vi~~~~~y~~~~~~~~~ 139 (414)
T 3ndn_A 80 NPTVSVFEERLRLIEGAP---------AAFATASGMAAVFTSLGALLG-----------AGDRLVAARSLFGSCFVVCSE 139 (414)
T ss_dssp CHHHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHTTCC-----------TTCEEEEESCCCHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHHCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCccchHHHHHHH
Confidence 344556667888888863 468999999998877766532 56778888899988766654
Q ss_pred ---HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeec
Q 038818 191 ---IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDA 267 (486)
Q Consensus 191 ---~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~ 267 (486)
..|+ +++.+|.+ |+++|++++++. +.+|+++.++|++|.+.|+++|+++|+++|+++++|+
T Consensus 140 ~~~~~g~---~~~~v~~~-------d~~~l~~ai~~~------t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe 203 (414)
T 3ndn_A 140 ILPRWGV---QTVFVDGD-------DLSQWERALSVP------TQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDN 203 (414)
T ss_dssp HHHHTTC---EEEEECTT-------CHHHHHHHTSSC------CSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHcCc---EEEEeCCC-------CHHHHHHhcCCC------CeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEEC
Confidence 4888 88888764 899999988653 3478889999999999999999999999999999999
Q ss_pred cccchhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCcc
Q 038818 268 AYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQ 345 (486)
Q Consensus 268 a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 345 (486)
+|+.+....+. . .++|.++.+++|+++++.. +|+++.+++.. .+.+.......
T Consensus 204 ~~~~~~~~~~~-~------~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~-~~~l~~~~~~~----------------- 258 (414)
T 3ndn_A 204 VFATPLLQQGF-P------LGVDVVVYSGTKHIDGQGRVLGGAILGDREYI-DGPVQKLMRHT----------------- 258 (414)
T ss_dssp TTTHHHHCCCG-G------GTCSEEEEETTTTTTCSSCCCCEEEEECHHHH-TTHHHHHHHHH-----------------
T ss_pred CCcccccCCch-h------cCCCeEeccCCccccCCCCceEEEEEECHHHH-HHHHHHHHHHc-----------------
Confidence 99865443321 1 1689999999999987542 67777655422 11111000000
Q ss_pred ccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC-----------------CeeEEEEEe
Q 038818 346 ITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR-----------------NFAVVCFRV 408 (486)
Q Consensus 346 ~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------------~~~~v~f~~ 408 (486)
+.....+.+|..++ +.+.+..++++..++++++.+.|++.|+++.+..| ..++++|.+
T Consensus 259 ---g~~~~~~~a~~~~~--~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l 333 (414)
T 3ndn_A 259 ---GPAMSAFNAWVLLK--GLETLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFAL 333 (414)
T ss_dssp ---CCCCCHHHHHHHHH--HGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEE
T ss_pred ---CCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEE
Confidence 11234455666665 45677888899999999999999999988654332 245788887
Q ss_pred ec
Q 038818 409 LP 410 (486)
Q Consensus 409 ~~ 410 (486)
.+
T Consensus 334 ~~ 335 (414)
T 3ndn_A 334 DC 335 (414)
T ss_dssp CS
T ss_pred cC
Confidence 54
No 162
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.85 E-value=8.2e-20 Score=184.31 Aligned_cols=347 Identities=12% Similarity=0.014 Sum_probs=208.3
Q ss_pred cCCCCCCcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchH
Q 038818 69 THWQSPYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCE 148 (486)
Q Consensus 69 ~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~ 148 (486)
.+..+..+++.-...+.++ .+.+.+..........|...+...++.+.+.+|+.+..+.+.. ..+++|+||++
T Consensus 40 i~l~~g~~~~~~~~~~~~~-~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~~------~~i~~t~g~~~ 112 (413)
T 3t18_A 40 INAALGTLLDDKGKIIALP-SVYDRLDEMDRSHIASYAPIEGEKDYRKIVIDTLFGPYKPEGY------ISAIATPGGTG 112 (413)
T ss_dssp EECCSCCCBCTTSCBCCCH-HHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSE------EEEEEESHHHH
T ss_pred EeccccCccCCCCCcCChH-HHHHHHHhcCcccccCcCCCCCCHHHHHHHHHHHhcccCcccc------CcEEEcCccHH
Confidence 3444444444433323333 3455555433222334555556778888888888777654321 26899999999
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCC
Q 038818 149 AILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAG 228 (486)
Q Consensus 149 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g 228 (486)
|+..++.+..+ +++.|+++..+|.++..+++..|. +++.+|++.. ++.+|+++|++++++....+
T Consensus 113 al~~~~~~~~~-----------~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~~ 177 (413)
T 3t18_A 113 AIRSAIFSYLD-----------EGDPLICHDYYWAPYRKICEEFGR---NFKTFEFFTD-DFAFNIDVYKEAIDEGIRDS 177 (413)
T ss_dssp HHHHHHHHHCC-----------SSCEEEEESSCCTHHHHHHHHHTC---EEEEECCBCT-TSSBCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcC-----------CCCEEEECCCCcccHHHHHHHhCC---eEEEeeccCC-CCCcCHHHHHHHHHHHhhcC
Confidence 99887776533 567888899999999999999999 9999998532 47999999999998642211
Q ss_pred CccEEEEeecC-CccccccCCchHHH---HHHH------HhCceEEeeccccchhccCccchhhhcCCCC--CC---cee
Q 038818 229 LIPLFLCATVG-TTAITTVDPLGPLC---DIAK------RYSIWVHVDAAYAGSACICPEFRHFIDGIEG--AD---SFS 293 (486)
Q Consensus 229 ~~p~~vv~~~g-tt~~G~idpl~~I~---~i~~------~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~--aD---si~ 293 (486)
...+++++.+ +|++|.+-|.+++. ++|+ +||+++++|++|.++................ .| .+.
T Consensus 178 -~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 256 (413)
T 3t18_A 178 -DRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVA 256 (413)
T ss_dssp -SEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEE
T ss_pred -CCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEE
Confidence 1236777777 89999998866555 5555 8999999999997654322211121111111 23 455
Q ss_pred eccccccC-CCCcceEEEee--CchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhch----
Q 038818 294 LNAHKWFF-TTLDCCCLWVK--NPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGV---- 366 (486)
Q Consensus 294 ~~~hK~l~-~p~~~g~~~~~--~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~---- 366 (486)
.+++|.++ ....+|+++.. +++.... +.....+.... .......+...+....+..
T Consensus 257 ~S~sK~~~~~G~riG~~~~~~~~~~~~~~-~~~~~~~~~~~----------------~~~~~~~~~~~a~~~~l~~~~~~ 319 (413)
T 3t18_A 257 FSMSKSHTAYGLRSGAAVGISSSKEIIEE-FEASLAHSARC----------------NWSNGTHAAQNILIELERAENKK 319 (413)
T ss_dssp EEHHHHTTCGGGCCEEEEEEESCHHHHHH-HHHHHHHHHHH----------------HTSSCCHHHHHHHHHTTSHHHHH
T ss_pred EecCccCCCcCcCcEEEEEecCCHHHHHH-HHHHHHHhhhc----------------cccCCChHHHHHHHHHhcChHHH
Confidence 68999998 44457888762 4443322 21100010000 0001223444444444322
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEE
Q 038818 367 ---ANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYV 443 (486)
Q Consensus 367 ---~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 443 (486)
+..+++.++..++.+++.+.|+++ ++++. ++..+.+.|.-... ..++.+.|.++|+.+.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~~~~~~~~~~~~~~----------------~~~~~~~l~~~gv~v~ 381 (413)
T 3t18_A 320 IYEQELVDLRNMLKSRADVFVTAAKEN-KLTMI-PYFGGFFTFIPTDK----------------AFDIVKDLEKENIFTI 381 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCB-CCCSSSCEEEECSC----------------HHHHHHHHHHTTEECE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCcc-CCCceEEEEeCCCC----------------HHHHHHHHHhCCEEEe
Confidence 233455667778888999999887 77765 34444443321111 2345666767787543
Q ss_pred eeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 444 SHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 444 ~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
+ +..++|+++... +++ ++ ++.|.++++++.
T Consensus 382 -~----g~~~iRis~~~~-~~~-~~---l~~l~~~l~~~~ 411 (413)
T 3t18_A 382 -P----SAKGIRVAICGV-GEE-KI---PKLVQRLAFYTN 411 (413)
T ss_dssp -E----CSSEEEECTTTS-CGG-GH---HHHHHHHHHHHH
T ss_pred -c----CCCceEEEEeeC-CHH-HH---HHHHHHHHHHHh
Confidence 3 246799998533 333 33 555555555543
No 163
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.85 E-value=1.1e-19 Score=182.03 Aligned_cols=217 Identities=13% Similarity=0.095 Sum_probs=155.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHH---
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKA--- 188 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a--- 188 (486)
.....++++++++++|.+ ..+++++|++|+..++.+... +++.|+++...|.+....
T Consensus 58 ~~~~~~l~~~la~~~g~~---------~~i~~~sG~~ai~~~~~~~~~-----------~gd~vl~~~~~y~~~~~~~~~ 117 (389)
T 3acz_A 58 NPTVEQFEEMVCSIEGAA---------GSAAFGSGMGAISSSTLAFLQ-----------KGDHLIAGDTLYGCTVSLFTH 117 (389)
T ss_dssp CHHHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHTTTCC-----------TTCEEEEESSCCHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhCCC---------eEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHHHHHHH
Confidence 334455667788888875 357778889999877765432 566788888999886665
Q ss_pred -HHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeec
Q 038818 189 -AQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDA 267 (486)
Q Consensus 189 -~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~ 267 (486)
++..|+ +++.+|. .|+++|+++|+++ +.+|+++.++|++|.+.|+++|+++|+++|+++++|+
T Consensus 118 ~~~~~g~---~~~~v~~-------~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~ 181 (389)
T 3acz_A 118 WLPRFGI---EVDLIDT-------SDVEKVKAAWKPN------TKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDA 181 (389)
T ss_dssp HHHHTTC---EEEEECT-------TCHHHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHcCC---EEEEECC-------CCHHHHHHhcCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEEC
Confidence 577888 8888875 3899999988653 3578889999999999999999999999999999999
Q ss_pred cccchhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCcc
Q 038818 268 AYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQ 345 (486)
Q Consensus 268 a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 345 (486)
+|+.+....+ .. .++|.++.++||++++|.+ +|+++.++++......... .+.
T Consensus 182 ~~~~~~~~~~-~~------~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~-~~~----------------- 236 (389)
T 3acz_A 182 TFTSPCFLKP-LE------LGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYR-KDA----------------- 236 (389)
T ss_dssp TTTCTTTCCG-GG------TTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHH-HHH-----------------
T ss_pred CCccccccCc-cc------cCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHH-Hhc-----------------
Confidence 9987653222 11 2689999999999999877 6888887733332211100 000
Q ss_pred ccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Q 038818 346 ITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFE 394 (486)
Q Consensus 346 ~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 394 (486)
+.....+..|..++.+ +.+..++++..++++.+.+.|++++.++
T Consensus 237 ---g~~~~~~~~~~~~~~l--~~l~~r~~~~~~~~~~l~~~l~~~~~v~ 280 (389)
T 3acz_A 237 ---GSLMAPMDAFLCARGM--KTLPIRMQIHMENGLKVAKFLEQHEKIV 280 (389)
T ss_dssp ---CCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHCTTEE
T ss_pred ---CCCCCHHHHHHHHcCc--cHHHHHHHHHHHHHHHHHHHHHcCCCee
Confidence 0012334556666544 4455667777888888888888876554
No 164
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.85 E-value=1.9e-19 Score=190.30 Aligned_cols=237 Identities=10% Similarity=0.099 Sum_probs=162.6
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCC
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGID 195 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g 195 (486)
.++.+.+++++|.+.. .++++|+|.||..++.+... +++.|+++..+|.|+..++...|.
T Consensus 198 ~eaE~~lA~~fGa~~a--------~~v~nGts~An~~ai~al~~-----------pGD~VLv~r~~H~S~~~~l~lsGa- 257 (715)
T 3n75_A 198 KEAEQYIARVFNADRS--------YMVTNGTSTANKIVGMYSAP-----------AGSTILIDRNCHKSLTHLMMMSDV- 257 (715)
T ss_dssp HHHHHHHHHHHTCSEE--------EEESSHHHHHHHHHHHHHCC-----------TTCEEEEESSCCHHHHHHHHHSCC-
T ss_pred HHHHHHHHHHhCCCCc--------eEECcHHHHHHHHHHHHhCC-----------CCCEEEECCCccHHHHHHHHHcCC-
Confidence 3455789999998753 45666667898777766543 788899999999999999999999
Q ss_pred CCCeEEEecCCCCCcc----c-----CHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEee
Q 038818 196 PKNFRAIKTTKSSSFT----L-----TPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVD 266 (486)
Q Consensus 196 ~~~v~~v~~d~~~~~~----~-----d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD 266 (486)
++++++.+.+ ++. + |+++|+++|++..+ ...|.+|+++.+ |++|.+.|+++|+++|++++ ++||
T Consensus 258 --~pv~v~~~~~-~~gi~~~i~~~~~d~e~Le~~l~~~~~-~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~~--livD 330 (715)
T 3n75_A 258 --TPIYFRPTRN-AYGILGGIPQSEFQHATIAKRVKETPN-ATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFD 330 (715)
T ss_dssp --EEEEECCCBC-TTCCBCCCCGGGGSHHHHHHHHHHSTT-CCSCSEEEEESS-CTTSEEECHHHHHHHCCCSE--EEEE
T ss_pred --EEEEEecccc-ccccccCcccccCCHHHHHHHHhhCcC-ccCceEEEEECC-CCCCccCCHHHHHHHhCcCc--EEEc
Confidence 9999987642 333 3 89999999986432 122457888888 89999999999999998763 8999
Q ss_pred ccccchhccCccchhhhcCCC---CCCce---eeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccC
Q 038818 267 AAYAGSACICPEFRHFIDGIE---GADSF---SLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVD 340 (486)
Q Consensus 267 ~a~g~~~~~~~~~~~~~~~~~---~aDsi---~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 340 (486)
+||++++.+.+.++.. ..+. .+|.+ +.++||+++++.++|++++++.-.. ..+.....++...
T Consensus 331 EAH~~~~~f~~~~~~~-~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~~-~~~~~~~~~~~ST--------- 399 (715)
T 3n75_A 331 SAWVPYTNFSPIYEGK-CGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNE-ETFNEAYMMHTTT--------- 399 (715)
T ss_dssp CTTCTTGGGSGGGTTS-STTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCCH-HHHHHHHHHTSCS---------
T ss_pred cccccccccCCccccc-cccccCcCCCEEEEEEecccccccCCCCeeEEEeCchhhH-HHHHHHHHhhcCC---------
Confidence 9999876555544321 1121 36876 8999999999989999999875211 1111111111110
Q ss_pred CCCccccCCCCC-CchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCC------eEEecC
Q 038818 341 YKDWQITLSRRF-RALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNR------FEIVAP 398 (486)
Q Consensus 341 ~~~~~~~~sr~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~------~~~~~~ 398 (486)
+-+. ...++-.+++.+-.+.-.++.++..++++++++.|+++++ |+++.+
T Consensus 400 --------Spsy~~~AsldaA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~ 456 (715)
T 3n75_A 400 --------SPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQP 456 (715)
T ss_dssp --------SCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSC
T ss_pred --------CchHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCc
Confidence 0011 1122333444443222245789999999999999987753 677654
No 165
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.84 E-value=1.6e-19 Score=180.86 Aligned_cols=297 Identities=13% Similarity=0.065 Sum_probs=183.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHc
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIA 192 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 192 (486)
....++.+++++++|. + ..++++|||+|+..++.+++.......+.. .++..|++...+|++....+..+
T Consensus 78 ~~~~~l~~~la~~~g~--~-------~v~~~~~gt~a~~~al~~~~~~~~~~~~~~-~~~~~vi~~~~~~~~~~~~~~~~ 147 (392)
T 3ruy_A 78 DQLGPWYEKVAKLTNK--E-------MVLPMNTGAEAVETAIKTARRWAYDVKKVE-ANRAEIIVCEDNFHGRTMGAVSM 147 (392)
T ss_dssp TTHHHHHHHHHHHHTC--S-------EEEEESSHHHHHHHHHHHHHHHHHHTSCCC-TTCCEEEEETTCCCCSSHHHHHT
T ss_pred HHHHHHHHHHHHhcCC--C-------EEEEeCcHHHHHHHHHHHHHHhhhhccCCC-CCCcEEEEEcCCcCCCCHhhhhc
Confidence 3445667888998882 2 589999999999999988765421111110 13456777767776544444333
Q ss_pred CCC-C---------CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHHHHHH
Q 038818 193 GID-P---------KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCDIAKR 258 (486)
Q Consensus 193 G~g-~---------~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~i~~~ 258 (486)
+.. . ..+..++. .|+++|+++|+++ +.+|+++.++|++|.+.| +++|+++|++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~ 214 (392)
T 3ruy_A 148 SSNEEYKRGFGPMLPGIIVIPY-------GDLEALKAAITPN------TAAFILEPIQGEAGINIPPAGFLKEALEVCKK 214 (392)
T ss_dssp CSCTTTTTTCCSCCSSEEEECT-------TCHHHHHHHCCTT------EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHT
T ss_pred cCChhhccccCCCCCCCeeeCc-------ccHHHHHHHhccC------eEEEEEeCccCCCCCccCCHHHHHHHHHHHHH
Confidence 221 0 02334432 2899999998732 457888889999999998 9999999999
Q ss_pred hCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCCCCC
Q 038818 259 YSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQ 337 (486)
Q Consensus 259 ~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 337 (486)
||+++|+|++|+++............++ ..|.++++ |++++. ..+|+++.+++ .. +.+.. ...
T Consensus 215 ~~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~~~S--K~l~gG~~~~G~~~~~~~-~~-~~~~~---~~~-------- 278 (392)
T 3ruy_A 215 ENVLFVADEIQTGLGRTGKVFACDWDNV-TPDMYILG--KALGGGVFPISCAAANRD-IL-GVFEP---GSH-------- 278 (392)
T ss_dssp TTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTTSCCEEEEECHH-HH-TTCCT---TSS--------
T ss_pred cCCEEEEeechhCCCccccchhhhccCC-CCCEEEEc--hhhhCChhhhEEEEECHH-HH-hhhcc---CCc--------
Confidence 9999999999965322111111111122 46777775 987764 45888877542 22 11110 000
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC--CCeEEecCCCeeEEEEEeecCCCCC
Q 038818 338 VVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGD--NRFEIVAPRNFAVVCFRVLPSASGL 415 (486)
Q Consensus 338 ~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~v~f~~~~~~~~~ 415 (486)
..+.....+.+.++...+..-..++..++..++++++.+.|+++ +.+... ++..+++.+.+...
T Consensus 279 ---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~g~~~~~~~~~~---- 344 (392)
T 3ruy_A 279 ---------GSTFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEIDNPMITEV-RGKGLFIGIELNEP---- 344 (392)
T ss_dssp ---------CCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCCCTTEEEE-EEETTEEEEEESSC----
T ss_pred ---------CCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhcCCCceEE-EeeeeEEEEEEcch----
Confidence 00001233333333333211112567788889999999999887 334433 33456667765431
Q ss_pred CCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 416 GDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 416 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
..++.+.|.++|+. +.+. +..++|+++. ..++++|++++++.|++++
T Consensus 345 ------------~~~l~~~l~~~gi~-v~~~---~~~~iRi~~~-~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 345 ------------ARPYCEQLKAAGLL-CKET---HENVIRIAPP-LVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp ------------SHHHHHHHHTTTEE-CCCB---TTTEEEECCC-TTCCHHHHHHHHHHHHHHH
T ss_pred ------------HHHHHHHHHHCCcE-EecC---CCCEEEEECC-CCCCHHHHHHHHHHHHHHh
Confidence 23566777777864 3332 3568999974 5778889999999998865
No 166
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.84 E-value=6.7e-20 Score=186.08 Aligned_cols=307 Identities=12% Similarity=0.060 Sum_probs=197.5
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCch
Q 038818 104 NWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHS 183 (486)
Q Consensus 104 ~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~ 183 (486)
.|...+...++++.+.+|+.+.++.+++ ..++|+|+++++.. +..... +++.|+++..+|.
T Consensus 93 ~y~~~~g~~~l~~~ia~~~~~~~~~~~~-------~i~~t~G~~~al~~-l~~l~~-----------~gd~Vl~~~p~y~ 153 (432)
T 3ei9_A 93 GYGAEQGAKPLRAAIAKTFYGGLGIGDD-------DVFVSDGAKCDISR-LQVMFG-----------SNVTIAVQDPSYP 153 (432)
T ss_dssp CCCCTTCCHHHHHHHHHHHHTTTTCCGG-------GEEEESCHHHHHHH-HHHHHC-----------TTCCEEEEESCCT
T ss_pred CCCCCCCCHHHHHHHHHHHHccCCCCcc-------eEEECCChHHHHHH-HHHHcC-----------CCCEEEEeCCCCH
Confidence 4544456688999999998875565554 78999999887754 332221 5667888999999
Q ss_pred HHHHHHHHcCCCC---------CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chH
Q 038818 184 ALQKAAQIAGIDP---------KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGP 251 (486)
Q Consensus 184 s~~~a~~~~G~g~---------~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~ 251 (486)
++..+++..|... .+++.+|++..+++..|++. ...+.+|+++.++|++|.+-+ +++
T Consensus 154 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------~~~~~~v~l~~p~NPtG~~~~~~~l~~ 222 (432)
T 3ei9_A 154 AYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST-----------VGRTDIIFFCSPNNPTGAAATREQLTQ 222 (432)
T ss_dssp HHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-----------CCCCSEEEEESSCTTTCCCCCHHHHHH
T ss_pred HHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh-----------CCCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 9999999888421 26888998753334455332 012346777899999998854 777
Q ss_pred HHHHHHHhCceEEeeccccchhccCccchhh--hcCCCCCCceeeccccccC-CCCcceEEEeeCchH------HHHHhc
Q 038818 252 LCDIAKRYSIWVHVDAAYAGSACICPEFRHF--IDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNA------LIKALS 322 (486)
Q Consensus 252 I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~------~~~~~~ 322 (486)
|+++|++||+++++|++|+.+.... ..... +.+....+.+..+++|+++ ....+|+++.+++.. +...+.
T Consensus 223 l~~la~~~~~~li~Dea~~~~~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~ 301 (432)
T 3ei9_A 223 LVEFAKKNGSIIVYDSAYAMYMSDD-NPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFN 301 (432)
T ss_dssp HHHHHHHHTCEEEEECTTGGGCCSS-CCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHH
T ss_pred HHHHHHHcCcEEEEccchHhhccCC-CCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHH
Confidence 7888999999999999998754321 11111 1122245577889999998 555689888876541 011111
Q ss_pred CCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC
Q 038818 323 TNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF---GVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR 399 (486)
Q Consensus 323 ~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 399 (486)
....+.. .....+...+++..+ +.+.+.++.++..++++++.+.|+++ ++++..+.
T Consensus 302 ~~~~~~~--------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 360 (432)
T 3ei9_A 302 RIICTCF--------------------NGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL-GYDVYGGK 360 (432)
T ss_dssp HHHHHSC--------------------CCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEECS
T ss_pred HHhcccc--------------------CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC-CceecCCC
Confidence 0000000 011234444444444 33567788888999999999999987 78877555
Q ss_pred CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHh-cCcEEEeeeeE--CCEeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 400 NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINA-SGQLYVSHGMV--AGIYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 400 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~--~~~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
....+.+.+.... ..++.+.+.+ .|+.+.++..+ .+.+++|+++. +++++|+++++.|+
T Consensus 361 ~~~~~~~~~~~~~---------------~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~---~~~e~l~~~l~rl~ 422 (432)
T 3ei9_A 361 NAPYVWVHFPNQS---------------SWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAF---GHRENILEACRRFK 422 (432)
T ss_dssp SSSEEEEECTTSC---------------HHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC---SCHHHHHHHHHHHH
T ss_pred cceEEEEECCCCC---------------HHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEec---CCHHHHHHHHHHHH
Confidence 5556666654211 2344555554 47754443322 23678999973 47889999999998
Q ss_pred HHHH
Q 038818 477 EKLD 480 (486)
Q Consensus 477 ~~~~ 480 (486)
+.-.
T Consensus 423 ~~~~ 426 (432)
T 3ei9_A 423 QLYK 426 (432)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 7543
No 167
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.84 E-value=4.9e-20 Score=185.41 Aligned_cols=284 Identities=12% Similarity=0.086 Sum_probs=188.4
Q ss_pred HHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHH----H
Q 038818 115 ENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAA----Q 190 (486)
Q Consensus 115 e~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~----~ 190 (486)
..++++.+++++|.+ ..++++||++|+..++.+... +++.|+++...|.+....+ +
T Consensus 84 ~~~le~~lA~l~g~~---------~~i~~ssGt~Ai~~al~~l~~-----------~Gd~Vi~~~~~y~~~~~~~~~~l~ 143 (415)
T 2fq6_A 84 HFSLQQAMCELEGGA---------GCVLFPCGAAAVANSILAFIE-----------QGDHVLMTNTAYEPSQDFCSKILS 143 (415)
T ss_dssp HHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHTTCC-----------TTCEEEEETTSCHHHHHHHHHTGG
T ss_pred HHHHHHHHHHHhCCC---------eEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHHHHHHHHHH
Confidence 334556678888864 357778999999877765422 5677888889998876554 3
Q ss_pred HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHH--hCceEEeecc
Q 038818 191 IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKR--YSIWVHVDAA 268 (486)
Q Consensus 191 ~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~--~g~~lhvD~a 268 (486)
..|+ +++.++.+ |+++|+++|+++ +.+|+++.++|++|.+.|+++|+++|++ +|+++|+|++
T Consensus 144 ~~G~---~v~~v~~~-------d~~~le~ai~~~------tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a 207 (415)
T 2fq6_A 144 KLGV---TTSWFDPL-------IGADIVKHLQPN------TKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNT 207 (415)
T ss_dssp GGTC---EEEEECTT-------CGGGGGGGCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECT
T ss_pred HcCc---EEEEECCC-------CHHHHHHhhccC------CcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECC
Confidence 4577 88888653 788999988754 3578889999999999999999999999 9999999999
Q ss_pred ccchhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccc
Q 038818 269 YAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQI 346 (486)
Q Consensus 269 ~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 346 (486)
|+.+....+ .. .++|.++.++||+++++.+ .|+++.+++ .+...... ...
T Consensus 208 ~a~~~~~~p-~~------~g~Div~~S~sK~lg~~g~~~~G~l~~~~~-~~~~l~~~-~~~------------------- 259 (415)
T 2fq6_A 208 WAAGVLFKA-LD------FGIDVSIQAATKYLVGHSDAMIGTAVCNAR-CWEQLREN-AYL------------------- 259 (415)
T ss_dssp TTTTTSSCG-GG------GTCSEEEEETTTTTTCSSSCCCEEEEECTT-THHHHHHH-HHH-------------------
T ss_pred CcccccCCc-cc------cCCeEEEEeCccccCCCCCceEEEEEeCHH-HHHHHHHH-HHh-------------------
Confidence 976533222 11 1689999999999998754 677777654 32221110 000
Q ss_pred cCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe-cC----------------CCeeEEEEEee
Q 038818 347 TLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIV-AP----------------RNFAVVCFRVL 409 (486)
Q Consensus 347 ~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~----------------~~~~~v~f~~~ 409 (486)
.+-.......|..++. .+.+..++++..+++..+++.|++.|.++-+ .+ ...++++|.+.
T Consensus 260 -~G~~~~~~~a~~~~~~--l~~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~ 336 (415)
T 2fq6_A 260 -MGQMVDADTAYITSRG--LRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLK 336 (415)
T ss_dssp -TTCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEES
T ss_pred -cCCCCCHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC
Confidence 0101123445555443 4667778888889999999999988776532 22 13578899886
Q ss_pred cCCCCCCCCCCccchHHHHHHHHHHHHh------cCc---EEEe--ee----eE----CC--EeEEEEEecCCCCcHHHH
Q 038818 410 PSASGLGDGKANEGANELNRKLLESINA------SGQ---LYVS--HG----MV----AG--IYFIRFAVGATLTEDRHV 468 (486)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~------~g~---~~~~--~~----~~----~~--~~~lR~~~~~~~tt~~di 468 (486)
+... .+...++.+.+.. .|. .... +. .. .+ .+.+|+|++ ..+++++|
T Consensus 337 g~~~-----------~~~~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G-~e~~~d~i 404 (415)
T 2fq6_A 337 KKLN-----------NEELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIG-LEDVDDLI 404 (415)
T ss_dssp SCCC-----------HHHHHHHHTTCSSCEECSCCCSSSCEEEEECHHHHHTTCTTCCCCCCSCEEEEECC-SSCHHHHH
T ss_pred CCCC-----------HHHHHHHHHhCCcCeEeccCCCCceeEEecCCCccccccchhhcCCCCCEEEEEec-CCCHHHHH
Confidence 4100 1223444444321 121 1111 10 00 12 468999995 67788899
Q ss_pred HHHHHHHHH
Q 038818 469 IAAWKVVQE 477 (486)
Q Consensus 469 d~~i~~l~~ 477 (486)
+.+.++|++
T Consensus 405 ~~l~~al~~ 413 (415)
T 2fq6_A 405 ADLDAGFAR 413 (415)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999888864
No 168
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.84 E-value=4.3e-20 Score=185.04 Aligned_cols=284 Identities=14% Similarity=0.121 Sum_probs=186.4
Q ss_pred HHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH----HH
Q 038818 114 LENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK----AA 189 (486)
Q Consensus 114 le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~----a~ 189 (486)
...++++.+++++|.+. .+++++||+|+..++. ... +++.|+++...|.+... .+
T Consensus 56 ~~~~lr~~la~~~g~~~---------~i~~~sGt~a~~~al~-~~~-----------~gd~Vi~~~~~y~~~~~~~~~~~ 114 (393)
T 1n8p_A 56 NRENLERAVAALENAQY---------GLAFSSGSATTATILQ-SLP-----------QGSHAVSIGDVYGGTHRYFTKVA 114 (393)
T ss_dssp HHHHHHHHHHHHTTCSE---------EEEESCHHHHHHHHHH-TSC-----------SSCEEEEESSCCHHHHHHHHHTS
T ss_pred hHHHHHHHHHHHhCCCc---------EEEECChHHHHHHHHH-HcC-----------CCCEEEEeCCCchHHHHHHHHHH
Confidence 34456778889988752 4666667999987776 322 55677788888876554 34
Q ss_pred HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh----CceEEe
Q 038818 190 QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY----SIWVHV 265 (486)
Q Consensus 190 ~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~----g~~lhv 265 (486)
+..|+ +++.+|++ | ++|+++|+++ +.+|+++.++|++|.+.|+++|+++|+++ |+++|+
T Consensus 115 ~~~G~---~v~~v~~~-------d-~~l~~~i~~~------t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~liv 177 (393)
T 1n8p_A 115 NAHGV---ETSFTNDL-------L-NDLPQLIKEN------TKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVV 177 (393)
T ss_dssp TTTCS---CCEEESSH-------H-HHHHHHSCSS------EEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEE
T ss_pred HHcCc---EEEEeCCC-------h-HHHHHhcccC------ceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEE
Confidence 45677 88888863 6 8888887642 45788899999999999999999999999 999999
Q ss_pred eccccchhccCccchhhhcCCCCCCceeeccccccCCCC-cc-eEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCC
Q 038818 266 DAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DC-CCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKD 343 (486)
Q Consensus 266 D~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~-g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 343 (486)
|++|+.+.... ... + ++|.++.++||+++++. .. |+++.+++.......... .
T Consensus 178 D~a~~~~~~~~--~~~----~-~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~-----~------------- 232 (393)
T 1n8p_A 178 DNTFLSPYISN--PLN----F-GADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQ-----N------------- 232 (393)
T ss_dssp ECTTTHHHHCC--GGG----G-TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHH-----H-------------
T ss_pred eCCccccccCC--HHH----c-CCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHH-----H-------------
Confidence 99998765431 111 1 68999999999988553 14 777776554433221100 0
Q ss_pred ccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCC-eEEe-cC-----C------------C-eeE
Q 038818 344 WQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNR-FEIV-AP-----R------------N-FAV 403 (486)
Q Consensus 344 ~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~-~~~~-~~-----~------------~-~~~ 403 (486)
..+........|..++.+ +.+...+++..++++.+.+.|++.+. +.-+ .+ + . .++
T Consensus 233 ---~~g~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i 307 (393)
T 1n8p_A 233 ---AIGAIPSPFDAWLTHRGL--KTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGM 307 (393)
T ss_dssp ---HHCCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSE
T ss_pred ---hcCCCCCHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccE
Confidence 001112334455544433 44666777788889999999988866 5432 22 1 2 568
Q ss_pred EEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcE---------EEeee--eE----------CC--EeEEEEEecC
Q 038818 404 VCFRVLPSASGLGDGKANEGANELNRKLLESINASGQL---------YVSHG--MV----------AG--IYFIRFAVGA 460 (486)
Q Consensus 404 v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~---------~~~~~--~~----------~~--~~~lR~~~~~ 460 (486)
++|.+.+. .....++.+.+...++. ...+. .. .| .+.+|+|++
T Consensus 308 ~~~~l~~~-------------~~~~~~~l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g- 373 (393)
T 1n8p_A 308 ISFRIKGG-------------AEAASKFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVG- 373 (393)
T ss_dssp EEEEESSC-------------HHHHHHHHHHCSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECC-
T ss_pred EEEEeCCc-------------HHHHHHHHhhCCcceECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEc-
Confidence 88888642 22344555554322211 01110 00 02 468999995
Q ss_pred CCCcHHHHHHHHHHHHHHH
Q 038818 461 TLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 461 ~~tt~~did~~i~~l~~~~ 479 (486)
..+++++|+.+.++|+++.
T Consensus 374 ~~~~~~~i~~l~~al~~~~ 392 (393)
T 1n8p_A 374 IEDTDDLLEDIKQALKQAT 392 (393)
T ss_dssp SSCHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhh
Confidence 6788889999999998753
No 169
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.84 E-value=4.8e-20 Score=186.47 Aligned_cols=326 Identities=11% Similarity=0.032 Sum_probs=201.3
Q ss_pred HHHHHHHhhcCC-CccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCc--ceEEcCCchHHHHHHHHHHHHHHHHHc
Q 038818 89 FLGEMLSSGFNV-VGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTG--GGVIQGTTCEAILCTLAAARDQILNEI 165 (486)
Q Consensus 89 ~~~~~l~~~~n~-~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~--~~~~t~ggt~a~~~al~~a~~~~~~~~ 165 (486)
.+.+.+...+.. ....|....+..++.+.+.+++....+.+.. .. ..++|+|||+|+..++......
T Consensus 71 ~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-----~~~~~i~~t~G~t~al~~~~~~~~~~----- 140 (420)
T 4f4e_A 71 AVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIA-----AGRVVTAQALGGTGALKIGADFLRTL----- 140 (420)
T ss_dssp HHHHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH-----TTCEEEEEEEHHHHHHHHHHHHHHHH-----
T ss_pred HHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccc-----cCceEEEECCccHHHHHHHHHHHHHh-----
Confidence 344444444433 2345555556678888888887665442101 12 5799999999998775432211
Q ss_pred cccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 166 GRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 166 ~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
.+++.|+++..+|.++...++..|. +++.+|+..++++.+|+++|++++++. .....+++.+.++|+||.
T Consensus 141 ----~~gd~Vlv~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~NPtG~ 210 (420)
T 4f4e_A 141 ----NPKAKVAISDPSWENHRALFDMAGF---EVVAYPYYDAKTNGVNFDGMLAALNGY---EPGTIVVLHACCHNPTGV 210 (420)
T ss_dssp ----CTTCCEEEEESCCHHHHHHHHHTTC---CEEEEECEETTTTEECHHHHHHHHTTC---CTTCEEEEECSSCTTTCC
T ss_pred ----CCCCEEEEeCCCcHhHHHHHHHcCC---eEEEeeeeccccCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCC
Confidence 0566788899999999999999999 999999832235799999999998732 122467888999999999
Q ss_pred c---CCchHHHHHHHHhCceEEeeccccchhccCc-cchh--hhcCCCCCCceeeccccccCC-CCcceEEEe--eCchH
Q 038818 246 V---DPLGPLCDIAKRYSIWVHVDAAYAGSACICP-EFRH--FIDGIEGADSFSLNAHKWFFT-TLDCCCLWV--KNPNA 316 (486)
Q Consensus 246 i---dpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~-~~~~--~~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~--~~~~~ 316 (486)
+ +++++|+++|++||+++++|++|+++....+ .... .+.+....+.+..+++|.++. ...+|++++ .++..
T Consensus 211 ~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~ 290 (420)
T 4f4e_A 211 DLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDSKDE 290 (420)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSHHH
T ss_pred CCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCHHH
Confidence 8 4577999999999999999999976554211 1111 111222445777889999984 455788764 34433
Q ss_pred HHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhc--------hHHHHHHHHHHHHHHHHHHHHHh
Q 038818 317 LIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFG--------VANLRNFLRSHVRMAQLFQELVG 388 (486)
Q Consensus 317 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g--------~~g~~~~~~~~~~~a~~l~~~L~ 388 (486)
............... .. ....+..+++...+. .+.++++.++..++++++.+.|+
T Consensus 291 ~~~~~~~~~~~~~~~--------------~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 353 (420)
T 4f4e_A 291 AARVLSQLKRVIRTN--------------YS---NPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLK 353 (420)
T ss_dssp HHHHHHHHHHHHHTT--------------TS---SCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcc--------------cC---CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 221111000000000 00 011222222222221 34467788888899999999998
Q ss_pred CC---CCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcH
Q 038818 389 GD---NRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTED 465 (486)
Q Consensus 389 ~~---~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~ 465 (486)
++ +++++.. +..+++.|.-.+ . +.+.+.+.+.|+. +.+. .|+++. ..++
T Consensus 354 ~~~~~~~~~~~~-~~~g~~~~~~~~--------------~---~~~~~~l~~~gI~-v~~~-------~Ris~~--~~~~ 405 (420)
T 4f4e_A 354 AAGIERDFSFIN-AQRGMFSYSGLT--------------S---AQVDRLREEFGIY-AVST-------GRICVA--ALNT 405 (420)
T ss_dssp HTTCSSCCTHHH-HSCSSEEECCCC--------------H---HHHHHHHHHHCEE-CCTT-------SEEEGG--GCCT
T ss_pred hcCCCCCceeEC-CCccEEEEeCCC--------------H---HHHHHHHHhCCEE-ecCC-------CeEEEe--cCCH
Confidence 76 3565443 334454442111 1 2344455566864 3332 299985 3345
Q ss_pred HHHHHHHHHHHHHH
Q 038818 466 RHVIAAWKVVQEKL 479 (486)
Q Consensus 466 ~did~~i~~l~~~~ 479 (486)
++|+++++.|++++
T Consensus 406 ~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 406 RNLDVVANAIAAVL 419 (420)
T ss_dssp TTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 57999999998875
No 170
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.84 E-value=1e-19 Score=183.64 Aligned_cols=338 Identities=13% Similarity=0.071 Sum_probs=196.4
Q ss_pred HHHHHHHHhhcCCCc-----cccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHH
Q 038818 88 GFLGEMLSSGFNVVG-----FNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQIL 162 (486)
Q Consensus 88 ~~~~~~l~~~~n~~~-----~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~ 162 (486)
..+.+.+...+..+. ..|...+...++.+.+.+|+.+.+|++.. ...+++|+|||+|+..++.+....
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~-----~~~i~~t~G~t~al~~~~~~l~~~-- 121 (417)
T 3g7q_A 49 DYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIE-----PQNIALTNGSQSAFFYLFNLFAGR-- 121 (417)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCC-----GGGEEEESCHHHHHHHHHHHHSBC--
T ss_pred HHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCC-----cccEEEeCCcHHHHHHHHHHHcCC--
Confidence 445555555442221 24555556678999999999888876532 137999999999998887776431
Q ss_pred HHccccCCCCeEEEec-CCCchHHHHHHHHc----CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEee
Q 038818 163 NEIGRENISRLVVYGS-DQTHSALQKAAQIA----GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCAT 237 (486)
Q Consensus 163 ~~~~~~~~~~~~v~~s-~~~H~s~~~a~~~~----G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~ 237 (486)
|.++ .+..|+++ ..+|..+...+... +.+. .+..++.+. ..+.+|+++|+ +.+ .+.+|+++
T Consensus 122 ---gd~~-~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~d~~~l~--~~~------~~~~v~~~ 187 (417)
T 3g7q_A 122 ---RADG-STKKVLFPLAPEYIGYADSGLEDDLFVSARP-NIELLPEGQ-FKYHVDFEHLH--IGE------ETGMICVS 187 (417)
T ss_dssp --------CCBEEEESSCCCHHHHHC-----CCEEECCC-EEEEEGGGE-EEEECCGGGCC--CCT------TEEEEEEE
T ss_pred ---CccC-CcceEEEeCCCccccchhhccchhhhccccC-cccccCCcc-cccccCHHHhc--ccc------CceEEEEC
Confidence 0000 11166676 66777766555322 2211 333444321 13578999998 332 24578889
Q ss_pred cCCccccccCC---chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCc
Q 038818 238 VGTTAITTVDP---LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNP 314 (486)
Q Consensus 238 ~gtt~~G~idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~ 314 (486)
.++|++|.+-| +++|+++|++||+++++|++|+.+.... .+..........+.+..+++|++.....+|+++.+ +
T Consensus 188 ~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~-~ 265 (417)
T 3g7q_A 188 RPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGI-IFSEARPLWNPNIILCMSLSKLGLPGSRCGIIIAN-D 265 (417)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCC-BCSCCCCCCCTTEEEEEESGGGTCTTSCCEEEECC-H
T ss_pred CCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccc-cccccccCCCCCEEEEEechhccCCCcceEEEEeC-H
Confidence 99999999988 8999999999999999999997532111 11111111234567788999975555668877664 3
Q ss_pred hHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHH----HHH-HHHHHHHHHHHHHHHHhC
Q 038818 315 NALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVAN----LRN-FLRSHVRMAQLFQELVGG 389 (486)
Q Consensus 315 ~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g----~~~-~~~~~~~~a~~l~~~L~~ 389 (486)
............+. .....+...++...+.... ..+ +.++..++.+++.+.|.+
T Consensus 266 ~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 324 (417)
T 3g7q_A 266 KTITAIANMNGIIS---------------------LAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRR 324 (417)
T ss_dssp HHHHHHHHHHHHHC---------------------CCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccee---------------------eCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33222111000000 0112233333333321111 222 444556666677777755
Q ss_pred -CC--CeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeEC-C--------EeEEEEE
Q 038818 390 -DN--RFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVA-G--------IYFIRFA 457 (486)
Q Consensus 390 -~~--~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-~--------~~~lR~~ 457 (486)
++ ++++..+.....+.+.+.... . ...++.+.+.++|+.+.++..+. + ..++|++
T Consensus 325 ~l~~~~~~~~~~~~g~~~~~~~~~~~---------~----~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis 391 (417)
T 3g7q_A 325 YLSEERCLIHKPEGAIFLWLWFKDLP---------I----TTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMN 391 (417)
T ss_dssp HCCTTTCEEECCCBSSEEEEECTTCS---------S----CHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEE
T ss_pred hcccCCceeeCCCcceEEEEEcCCCC---------C----CHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEE
Confidence 44 467664444445555554311 0 12356667777787544433221 1 4689999
Q ss_pred ecCCCCcHHHHHHHHHHHHHHHHHHhhc
Q 038818 458 VGATLTEDRHVIAAWKVVQEKLDGILAT 485 (486)
Q Consensus 458 ~~~~~tt~~did~~i~~l~~~~~~l~~~ 485 (486)
+. . ++++|+++++.|.++++++.++
T Consensus 392 ~~--~-~~~~i~~~~~~l~~~l~~~~~~ 416 (417)
T 3g7q_A 392 YV--P-EPDKIEAGVKILAEEIERAWRE 416 (417)
T ss_dssp SC--S-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred ec--C-CHHHHHHHHHHHHHHHHHHHhc
Confidence 85 2 7889999999999999887653
No 171
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.83 E-value=6.7e-20 Score=184.81 Aligned_cols=327 Identities=13% Similarity=0.068 Sum_probs=203.1
Q ss_pred HHHHHHHHhhc-C-CCccccccChhhHHHHHHHHHHHHHHcCC--CCCCccCCCcceEE--cCCchHHHHHHHHHHHHHH
Q 038818 88 GFLGEMLSSGF-N-VVGFNWMSSPAATELENIVMDWLGEMLKL--PKSFLFSGTGGGVI--QGTTCEAILCTLAAARDQI 161 (486)
Q Consensus 88 ~~~~~~l~~~~-n-~~~~~~~~~~~~~~le~~~~~~l~~l~g~--~~~~~~~~~~~~~~--t~ggt~a~~~al~~a~~~~ 161 (486)
..+.+.+.... + .....|...+...++++.+.+++....|. +.+ ..++ |+||++|+..++..++..
T Consensus 51 ~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~-------~v~~~~t~gg~~a~~~~~~~~~~~- 122 (412)
T 1ajs_A 51 PVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEK-------RVGGVQSLGGTGALRIGAEFLARW- 122 (412)
T ss_dssp HHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTT-------CEEEEEEEHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHHhcCCCCccCCC-------cEEEEECCCcHHHHHHHHHHHHHh-
Confidence 34555555554 2 12334544555677887777777554443 222 6888 999999998876543321
Q ss_pred HHHccccCCCC-----eEEEecCCCchHHHHHHHHcCCCCCC-eEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEE
Q 038818 162 LNEIGRENISR-----LVVYGSDQTHSALQKAAQIAGIDPKN-FRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLC 235 (486)
Q Consensus 162 ~~~~~~~~~~~-----~~v~~s~~~H~s~~~a~~~~G~g~~~-v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv 235 (486)
. ++ +.|+++..+|.++...++..|. + ++.+|.++.+++.+|+++|++++++. +....+|+
T Consensus 123 -~-------~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~ 188 (412)
T 1ajs_A 123 -Y-------NGTNNKDTPVYVSSPTWENHNGVFTTAGF---KDIRSYRYWDTEKRGLDLQGFLSDLENA---PEFSIFVL 188 (412)
T ss_dssp -S-------SSSSCCCSCEEEEESCCTHHHHHHHHTTC---SCEEEEECEETTTTEECHHHHHHHHHHS---CTTCEEEE
T ss_pred -C-------cCcCCCCCeEEEcCCCcHHHHHHHHHcCC---ceeEEEeeecCCCCccCHHHHHHHHHhC---CCCcEEEE
Confidence 0 34 5677888899999999999999 9 99999853235789999999999752 11245677
Q ss_pred eecCCccccccC---CchHHHHHHHHhCceEEeeccccchhccC---c--cchhhhcCCCCCCceeeccccccCC-CCcc
Q 038818 236 ATVGTTAITTVD---PLGPLCDIAKRYSIWVHVDAAYAGSACIC---P--EFRHFIDGIEGADSFSLNAHKWFFT-TLDC 306 (486)
Q Consensus 236 ~~~gtt~~G~id---pl~~I~~i~~~~g~~lhvD~a~g~~~~~~---~--~~~~~~~~~~~aDsi~~~~hK~l~~-p~~~ 306 (486)
.+.++|++|.+- ++++|+++|++||+++++|++|.++.... + .... +.....-+.+..+++|.++. ...+
T Consensus 189 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~ri 267 (412)
T 1ajs_A 189 HACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRY-FVSEGFELFCAQSFSKNFGLYNERV 267 (412)
T ss_dssp ESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHH-HHHTTCCEEEEEECTTTSCCGGGCE
T ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHH-HhccCCcEEEEEecccccCCCCcce
Confidence 899999999984 46789999999999999999987654321 1 1111 11111123668899998875 3347
Q ss_pred eEEEe--eCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhc--------hHHHHHHHHHH
Q 038818 307 CCLWV--KNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFG--------VANLRNFLRSH 376 (486)
Q Consensus 307 g~~~~--~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g--------~~g~~~~~~~~ 376 (486)
|++++ ++++.+.........+... +..+ ...+..+++...+. .+.++++.++.
T Consensus 268 G~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 330 (412)
T 1ajs_A 268 GNLTVVAKEPDSILRVLSQMQKIVRV--------------TWSN---PPAQGARIVARTLSDPELFHEWTGNVKTMADRI 330 (412)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHHT--------------TTSS---CCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCHHHHHHHHHHHHHHHhc--------------ccCC---CChHHHHHHHHHHcCcchhHHHHHHHHHHHHHH
Confidence 88888 2443211111000000000 0000 12233333333331 23667788888
Q ss_pred HHHHHHHHHHHhCCC---CeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeE
Q 038818 377 VRMAQLFQELVGGDN---RFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYF 453 (486)
Q Consensus 377 ~~~a~~l~~~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~ 453 (486)
.++++++.+.|++++ ++++.. +..+.+.|. .. . ...+...+.+.|+. +.+ .
T Consensus 331 ~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~~--~~-------------~--~~~~~~~l~~~gv~-v~~-------~ 384 (412)
T 1ajs_A 331 LSMRSELRARLEALKTPGTWNHIT-DQIGMFSFT--GL-------------N--PKQVEYLINQKHIY-LLP-------S 384 (412)
T ss_dssp HHHHHHHHHHHHHTTCSSCCHHHH-HCCSSEEEC--CC-------------C--HHHHHHHHHTTCEE-CCT-------T
T ss_pred HHHHHHHHHHHHhhCCCCCeeEEc-CCCceEEEe--CC-------------C--HHHHHHHHHhCCEE-ecC-------C
Confidence 899999999998874 365543 333444442 11 1 12334444566764 333 2
Q ss_pred EEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 454 IRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 454 lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
+|++++. .++++++++++.|+++++++
T Consensus 385 ~Ris~~~--~~~~~i~~~~~~l~~~l~~~ 411 (412)
T 1ajs_A 385 GRINMCG--LTTKNLDYVATSIHEAVTKI 411 (412)
T ss_dssp SEEEGGG--CCTTTHHHHHHHHHHHHHHC
T ss_pred cEEEeee--CCHHHHHHHHHHHHHHHHhc
Confidence 6999862 46779999999999988653
No 172
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.83 E-value=2.7e-19 Score=181.98 Aligned_cols=327 Identities=10% Similarity=0.059 Sum_probs=189.6
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchH
Q 038818 105 WMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSA 184 (486)
Q Consensus 105 ~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s 184 (486)
|..++...+ +++.+++++|.+ ..+++++||+|+..++.+.+...+.... -.++..|+++..+|.+
T Consensus 58 ~~~~~~~~~----l~~~la~~~g~~---------~~i~~~sGt~a~~~al~~l~~~~~~~~~--~~~gd~Vi~~~~~~~~ 122 (437)
T 3bb8_A 58 LTTGRFNDA----FEKKLGEYLGVP---------YVLTTTSGSSANLLALTALTSPKLGVRA--LKPGDEVITVAAGFPT 122 (437)
T ss_dssp CBSCHHHHH----HHHHHHHHHTCS---------EEEEESCHHHHHHHHHHHTTCGGGGGGS--CCTTCEEEECSSSCHH
T ss_pred cCCChHHHH----HHHHHHHHHCCC---------cEEEeCCHHHHHHHHHHHhhhccccccc--CCCcCEEEECCCCcHH
Confidence 334454444 445677777765 3688899999998887765210000000 0156788899999999
Q ss_pred HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEE
Q 038818 185 LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVH 264 (486)
Q Consensus 185 ~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lh 264 (486)
+..++...|+ +++.+|++++ ++.+|+++|++++++. +.+|++++ ++|...|+++|.++|+++|+++|
T Consensus 123 ~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~i~~~------~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li 189 (437)
T 3bb8_A 123 TVNPTIQNGL---IPVFVDVDIP-TYNVNASLIEAAVSDK------TKAIMIAH---TLGNLFDLAEVRRVADKYNLWLI 189 (437)
T ss_dssp HHHHHHHTTC---EEEECCEETT-TTEECGGGHHHHCCTT------EEEEEEEC---GGGCCCCHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHcCC---EEEEEeccCc-cCCcCHHHHHHhcCCC------CeEEEEeC---CCCChhcHHHHHHHHHHcCCEEE
Confidence 9999999999 9999998752 5799999999988643 34566654 46888999999999999999999
Q ss_pred eeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcc-eEEEeeCchHHHHHhcCCcccccC----ccCC-----
Q 038818 265 VDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDC-CCLWVKNPNALIKALSTNPEFLRN----KASD----- 334 (486)
Q Consensus 265 vD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~-g~~~~~~~~~~~~~~~~~~~y~~~----~~~~----- 334 (486)
+|+||+.+.... .+. + + ...|.++.+++|....|.+. |+++.+++ .+...+....++-.. ...+
T Consensus 190 ~D~a~~~g~~~~--~~~-~-~-~~~d~~~~s~~~~k~l~~g~gg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (437)
T 3bb8_A 190 EDCCDALGSTYD--GKM-A-G-TFGDIGTVSFYPAKHITMGEGGAVFTQSA-ELKSIIESFRDWGRDCYCAPGCDNTCKK 263 (437)
T ss_dssp EECTTCTTCEET--TEE-T-T-SSSSEEEEECSTTSSSCCSSCEEEEESCH-HHHHHHHHHHBTTBCC------------
T ss_pred EECccccCceEC--Cee-c-c-cccCEEEEECcCCcCCCCCCeEEEEeCCH-HHHHHHHHHHHhCccccccccccccccc
Confidence 999998554331 111 1 1 13677666643322223333 55554434 322221110001000 0000
Q ss_pred -----CCCcc-CC-CCcc---ccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC-----
Q 038818 335 -----SKQVV-DY-KDWQ---ITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR----- 399 (486)
Q Consensus 335 -----~~~~~-~~-~~~~---~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~----- 399 (486)
..... .+ ..++ ....-+...+...+++..+ +.+.+.+++..++++++.+.|++++++.++...
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~ 341 (437)
T 3bb8_A 264 RFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQL--ERIEEFVEKRKANFKYLKDALQSCADFIELPEATENSD 341 (437)
T ss_dssp ----CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHGGGGTTTEECCCCCTTEE
T ss_pred ccccccccccccccccccccccCcccCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCCCCc
Confidence 00000 00 0000 0011112233333344433 445677777889999999999998887665321
Q ss_pred -CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeee--------EC----------------CEeEE
Q 038818 400 -NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGM--------VA----------------GIYFI 454 (486)
Q Consensus 400 -~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------~~----------------~~~~l 454 (486)
....+.+.+.... +.....+.+.|.++|+..-.... +. ....+
T Consensus 342 ~~~~~~~~~~~~~~------------~~~~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l 409 (437)
T 3bb8_A 342 PSWFGFPITLKEDS------------GVSRIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTF 409 (437)
T ss_dssp CCCSSEEEEECGGG------------SSCHHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEE
T ss_pred eeeEEEEEEECCcC------------cCcHHHHHHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEE
Confidence 1112333333210 00124567777777874211100 00 02359
Q ss_pred EEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 455 RFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 455 R~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
|+++ ++.+|++|||+++++|+++++
T Consensus 410 rl~~-~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 410 WIGI-YPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp EECC-STTCCHHHHHHHHHHHHHHTT
T ss_pred EecC-CCCCCHHHHHHHHHHHHHHHc
Confidence 9987 688999999999999988753
No 173
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.83 E-value=1.9e-19 Score=180.57 Aligned_cols=296 Identities=14% Similarity=0.054 Sum_probs=185.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.....++.+++++++|. + ..++|+|||+|+..++.+++..... +..+ ++.+|+.+...|.+...+++.
T Consensus 81 ~~~~~~l~~~la~~~g~--~-------~v~~~~gg~~a~~~al~~~~~~~~~--~~~~-~~~vi~~~~~yh~~~~~~~~~ 148 (397)
T 2ord_A 81 NRPQMELAELLSKNTFG--G-------KVFFANTGTEANEAAIKIARKYGKK--KSEK-KYRILSAHNSFHGRTLGSLTA 148 (397)
T ss_dssp EHHHHHHHHHHHHTTTS--C-------EEEEESSHHHHHHHHHHHHHHHHHH--HCTT-CCEEEEEBTCCCCSSHHHHHH
T ss_pred CHHHHHHHHHHHHhcCC--C-------eEEEeCCHHHHHHHHHHHHHHHhhc--CCCC-CceEEEEcCCcCCCchhhhhc
Confidence 34556677888888873 2 5899999999999988877642111 0000 234555555667777767777
Q ss_pred cCCC---------CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc----cCCchHHHHHHHH
Q 038818 192 AGID---------PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT----VDPLGPLCDIAKR 258 (486)
Q Consensus 192 ~G~g---------~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~----idpl~~I~~i~~~ 258 (486)
.|.. ...++.+|. .|+++|++++++. +.+|+++.++|++|. .+++++|+++|++
T Consensus 149 ~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~ 215 (397)
T 2ord_A 149 TGQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRKMSED------VCAVFLEPIQGESGIVPATKEFLEEARKLCDE 215 (397)
T ss_dssp SBCHHHHGGGCSCCTTEEEECT-------TCHHHHHHHCCTT------EEEEEECSEECTTTCEECCHHHHHHHHHHHHH
T ss_pred cCChhhccccCCCCCCeeEecC-------CCHHHHHHHhhcC------eEEEEEecccCCCCcccCCHHHHHHHHHHHHH
Confidence 7761 001666664 2899999988642 457888889999998 3789999999999
Q ss_pred hCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCc
Q 038818 259 YSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQV 338 (486)
Q Consensus 259 ~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~ 338 (486)
||+++++|++|+++...........-+. ..|.+++ +|+++++.++|+++++++- . .+. .. ..
T Consensus 216 ~~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~s~--sK~~~~G~r~G~~~~~~~~-~--~l~--~~--~~-------- 277 (397)
T 2ord_A 216 YDALLVFDEVQCGMGRTGKLFAYQKYGV-VPDVLTT--AKGLGGGVPIGAVIVNERA-N--VLE--PG--DH-------- 277 (397)
T ss_dssp HTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECSTT-C--CCC--TT--SS--------
T ss_pred cCCEEEEEecccCCccCccchhhhhhCC-CCCeeee--ccccCCCcCeEEEEEchHh-c--ccC--CC--Cc--------
Confidence 9999999999975322111111001122 3676655 7999977789999887652 1 111 00 00
Q ss_pred cCCCCccccCCCCCCchH---HHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC----CCeEEecCCCeeEEEEEeecC
Q 038818 339 VDYKDWQITLSRRFRALK---LWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGD----NRFEIVAPRNFAVVCFRVLPS 411 (486)
Q Consensus 339 ~~~~~~~~~~sr~~~~l~---~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~~~~~ 411 (486)
.. +. ....+. +..+++.+.. +++.++..++++++.+.|+++ +.+... ++..+++.|.+...
T Consensus 278 --~~--~~----~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~~~~~~~ 345 (397)
T 2ord_A 278 --GT--TF----GGNPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKEEYDVVADV-RGMGLMIGIQFREE 345 (397)
T ss_dssp --CC--SS----TTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEECTT
T ss_pred --CC--CC----CCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCCceEEE-EEEeEEEEEEECCh
Confidence 00 00 112233 3333443332 356677778888888888654 322222 23345667766432
Q ss_pred CCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 412 ASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
. ...++.+.|.++|+.+. +. +..++|+++ ...+++++++++++.|++++++
T Consensus 346 ~--------------~~~~l~~~l~~~gi~v~-~~---~~~~iRis~-~~~~~~e~i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 346 V--------------SNREVATKCFENKLLVV-PA---GNNTIRFLP-PLTVEYGEIDLAVETLKKVLQG 396 (397)
T ss_dssp S--------------CHHHHHHHHHHTTEECE-EE---TTTEEEECC-CTTCCHHHHHHHHHHHHHHHHT
T ss_pred H--------------HHHHHHHHHHHCCCEEc-cC---CCCEEEEEC-CcCCCHHHHHHHHHHHHHHHhh
Confidence 1 12456677777787433 32 346899997 3577889999999999998764
No 174
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.83 E-value=7e-19 Score=178.04 Aligned_cols=302 Identities=10% Similarity=0.007 Sum_probs=187.1
Q ss_pred HHHHHHHHcCCCCCCccCCCcceEEcCCchHHHH--HHHHHHHHHHHHHccccCCC--------CeEEEecCCCchHHHH
Q 038818 118 VMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAIL--CTLAAARDQILNEIGRENIS--------RLVVYGSDQTHSALQK 187 (486)
Q Consensus 118 ~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~--~al~~a~~~~~~~~~~~~~~--------~~~v~~s~~~H~s~~~ 187 (486)
+++.++++++.+++ ..++|+|+++++. .++.+..... . + ++.|+++..+|..+..
T Consensus 75 lr~~ia~~~~~~~~-------~i~~t~G~~~al~~~~~~~~l~~~~--~------g~~~~~~~~gd~Vlv~~p~y~~~~~ 139 (423)
T 3ez1_A 75 ARALFAGYLDVKAE-------NVLVWNNSSLELQGLVLTFALLHGV--R------GSTGPWLSQTPKMIVTVPGYDRHFL 139 (423)
T ss_dssp HHHHHHHHTTSCGG-------GEEECSSCHHHHHHHHHHHHHHTCC--T------TCSSCGGGGCCEEEEEESCCHHHHH
T ss_pred HHHHHHHHhCCChh-------hEEEeCCcHHHHHHHHHHHHHhccC--C------CccccccCCCCEEEEcCCCcHHHHH
Confidence 34556666787665 7899999999986 5555443200 0 1 4678889999999999
Q ss_pred HHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEe-ecCCccccccCCch---HHHHHH-HHhCce
Q 038818 188 AAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCA-TVGTTAITTVDPLG---PLCDIA-KRYSIW 262 (486)
Q Consensus 188 a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~-~~gtt~~G~idpl~---~I~~i~-~~~g~~ 262 (486)
.++..|. +++.+|+++ + .+|+++|++++++ ...+.+|++ ..++|++|.+-|.+ +|+++| ++||++
T Consensus 140 ~~~~~g~---~~~~v~~~~--~-g~d~~~l~~~l~~----~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~ 209 (423)
T 3ez1_A 140 LLQTLGF---ELLTVDMQS--D-GPDVDAVERLAGT----DPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFT 209 (423)
T ss_dssp HHHHHTC---EEEEEEEET--T-EECHHHHHHHHHS----CTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCE
T ss_pred HHHHcCC---EEEeccCCC--C-CCCHHHHHHHHhh----CCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCE
Confidence 9999999 999999985 2 4999999999952 112445654 47899999998876 888888 999999
Q ss_pred EEeeccccchhccC---ccchhhh-----cCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCC
Q 038818 263 VHVDAAYAGSACIC---PEFRHFI-----DGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASD 334 (486)
Q Consensus 263 lhvD~a~g~~~~~~---~~~~~~~-----~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~ 334 (486)
+++|++|+...+.. +.....+ .+....+.+..+++|++..+.++|+++.+++ .... +.....+.
T Consensus 210 li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~-~~~~-~~~~~~~~------ 281 (423)
T 3ez1_A 210 IFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSED-NIRW-LSKYLGAQ------ 281 (423)
T ss_dssp EEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECHH-HHHH-HHHHHHHS------
T ss_pred EEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCHH-HHHH-HHHHHhhh------
Confidence 99999997432211 1111111 0122455778889998777778888777543 3221 11000000
Q ss_pred CCCccCCCCccccCCCCCCchHHHHHHHHhch------HHHHHHHHHHHH----HHHHHHHHHhCCC-CeEEecCCCeeE
Q 038818 335 SKQVVDYKDWQITLSRRFRALKLWLVLRSFGV------ANLRNFLRSHVR----MAQLFQELVGGDN-RFEIVAPRNFAV 403 (486)
Q Consensus 335 ~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~------~g~~~~~~~~~~----~a~~l~~~L~~~~-~~~~~~~~~~~~ 403 (486)
+.....+..+++...+.. +.+++..+...+ +.+.|.+.|.+++ ++++..+.....
T Consensus 282 --------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~ 347 (423)
T 3ez1_A 282 --------------SIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYF 347 (423)
T ss_dssp --------------CSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSC
T ss_pred --------------ccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEE
Confidence 001122333333333222 223333333333 3444555555564 477664544455
Q ss_pred EEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeee-E-----CCEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 038818 404 VCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGM-V-----AGIYFIRFAVGATLTEDRHVIAAWKVVQE 477 (486)
Q Consensus 404 v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~-----~~~~~lR~~~~~~~tt~~did~~i~~l~~ 477 (486)
+.+.+.... ...+.+.+.++|+.+.+... + .+..++|+++.. .++++|+++++.|.+
T Consensus 348 ~~~~~~~~~---------------~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~--~~~~~i~~~~~~l~~ 410 (423)
T 3ez1_A 348 ISLDTAEPV---------------ADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTR--PPVEEVRTAMQVVAA 410 (423)
T ss_dssp EEEEESSSC---------------HHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSS--SCHHHHHHHHHHHHH
T ss_pred EEEECCCCc---------------HHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCC--CCHHHHHHHHHHHHH
Confidence 666664311 23566667777875433121 1 235789999842 378899999999999
Q ss_pred HHHHHh
Q 038818 478 KLDGIL 483 (486)
Q Consensus 478 ~~~~l~ 483 (486)
+++++.
T Consensus 411 ~l~~~~ 416 (423)
T 3ez1_A 411 CIRLAT 416 (423)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 987654
No 175
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.83 E-value=9.2e-19 Score=172.52 Aligned_cols=280 Identities=9% Similarity=-0.044 Sum_probs=187.9
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCC
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDP 196 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~ 196 (486)
++++++++++|.+++ ..++|+|||+++..++.+.. ++.|+++..+|.++..+++..|+
T Consensus 54 ~lr~~la~~~~~~~~-------~i~~t~g~~~al~~~~~~l~-------------gd~Vi~~~p~~~~~~~~~~~~g~-- 111 (350)
T 3fkd_A 54 TLRQMLAKRNSVDNN-------AILVTNGPTAAFYQIAQAFR-------------GSRSLIAIPSFAEYEDACRMYEH-- 111 (350)
T ss_dssp HHHHHHHHHTTCCGG-------GEEEESHHHHHHHHHHHHTT-------------TCEEEEEESCCHHHHHHHHHTTC--
T ss_pred HHHHHHHHHhCcCHH-------HEEEcCCHHHHHHHHHHHHC-------------CCEEEEeCCCcHHHHHHHHHcCC--
Confidence 466788888998765 78999999999977766542 34577888999999999999999
Q ss_pred CCeEEEec-CCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhC-ceEEeeccccchhc
Q 038818 197 KNFRAIKT-TKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYS-IWVHVDAAYAGSAC 274 (486)
Q Consensus 197 ~~v~~v~~-d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g-~~lhvD~a~g~~~~ 274 (486)
+++.+|+ ++. ..+++ + .+.+|+++.++|++|.+-|+++|.++++.++ .++++|++|+.+..
T Consensus 112 -~~~~v~~~~~~--~~~~~--------~------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~ 174 (350)
T 3fkd_A 112 -EVCFYPSNEDI--GEADF--------S------NMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTT 174 (350)
T ss_dssp -EEEEEETTSCG--GGSCC--------T------TCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCS
T ss_pred -eEEEEecCCcc--ccCcc--------C------CCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhcc
Confidence 9999999 642 24454 1 2346788999999999999999999999876 79999999976432
Q ss_pred cCccchhhhcCCCCCCceeeccccccC-CCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCC
Q 038818 275 ICPEFRHFIDGIEGADSFSLNAHKWFF-TTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFR 353 (486)
Q Consensus 275 ~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~ 353 (486)
........+ .....+.++.+++|+++ .+..+|+++. +++...........+ ...
T Consensus 175 ~~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~-----------------------~~~ 229 (350)
T 3fkd_A 175 EEVIRPADI-KGRKNLVMVYSFSHAYGIPGLRIGYIVA-NKDFMKRVAAFSTPW-----------------------AVN 229 (350)
T ss_dssp SCCCCGGGG-TTCSSEEEEEESHHHHSCGGGCCEEEEC-CHHHHHHHHTTCCTT-----------------------CSC
T ss_pred CcchhhHHh-hcCCCEEEEecCchhccCcchheEeEEe-CHHHHHHHHHhCCCC-----------------------CCC
Confidence 211111111 11234477788999998 4467888887 444433222111000 112
Q ss_pred chHHHHHHHHhchHH-HHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHH
Q 038818 354 ALKLWLVLRSFGVAN-LRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLL 432 (486)
Q Consensus 354 ~l~~~~~l~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~ 432 (486)
.+..+++...+.... +.+.+++..++++++.+.|+++|++++. ++..+.+.+++... ...++.
T Consensus 230 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~---------------~~~~l~ 293 (350)
T 3fkd_A 230 ALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNRLDGVEVH-PSGTTFFLLRLKKG---------------TAAELK 293 (350)
T ss_dssp HHHHHHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHHHSTTEEEC-CCSSSEEEEEESSS---------------CHHHHH
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEC-CCCCcEEEEECCCC---------------CHHHHH
Confidence 344444444432211 3333444458899999999988899875 55556666666531 134567
Q ss_pred HHHHh-cCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 433 ESINA-SGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 433 ~~l~~-~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
+.|.+ .|+.+..+..+. +..++|+++. +++++++++++|+++.+
T Consensus 294 ~~L~~~~gi~v~~g~~f~~~~~~~iRis~~----~~~~~~~l~~al~~~~~ 340 (350)
T 3fkd_A 294 KYMLEEYNMLIRDASNFRGLDESYVRITTQ----RPAQNQLFIKALETFLE 340 (350)
T ss_dssp HHHHHTTCEECEECTTSTTCCTTEEEEECC----CHHHHHHHHHHHHHHHT
T ss_pred HHHHHHCCEEEEeCccCCCCCCCEEEEEcC----CHHHHHHHHHHHHHHHH
Confidence 77777 787544333222 2578999974 66799999999998764
No 176
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.83 E-value=6.2e-18 Score=171.13 Aligned_cols=316 Identities=13% Similarity=0.053 Sum_probs=186.8
Q ss_pred HHHHHHHHHHHHHc-CCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 113 ELENIVMDWLGEML-KLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 113 ~le~~~~~~l~~l~-g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
....++++.+++++ | +.. ..+++|+||++|+..++..++... . ++.+|+.+...|.+...++..
T Consensus 84 ~~~~~l~~~la~~~~~-~~~------~~v~~~~g~~~a~~~~~~~a~~~~--~------~~~vi~~~p~y~~~~~~~~~~ 148 (426)
T 1sff_A 84 EPYLELCEIMNQKVPG-DFA------KKTLLVTTGSEAVENAVKIARAAT--K------RSGTIAFSGAYHGRTHYTLAL 148 (426)
T ss_dssp HHHHHHHHHHHHHSSC-SSC------EEEEEESSHHHHHHHHHHHHHHHH--T------CCEEEEETTCCCCSSHHHHHH
T ss_pred HHHHHHHHHHHHhCCc-ccc------cEEEEeCchHHHHHHHHHHHHHhh--C------CCeEEEECCCcCCCchHhhhh
Confidence 34455667788888 4 221 168999999999998888654321 1 444555555566666667777
Q ss_pred cCCC----------CCCeEEEecCC---CCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHH
Q 038818 192 AGID----------PKNFRAIKTTK---SSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCD 254 (486)
Q Consensus 192 ~G~g----------~~~v~~v~~d~---~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~ 254 (486)
.|.. ...++.+|++. .+.+.+|+++|++++++.. .+..+.+|+++...+++|.+.| +++|.+
T Consensus 149 ~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~ 227 (426)
T 1sff_A 149 TGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDA-APEDIAAIVIEPVQGEGGFYASSPAFMQRLRA 227 (426)
T ss_dssp SSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTC-CGGGEEEEEECSBCTTTTSCBCCHHHHHHHHH
T ss_pred cCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhcc-CCCceEEEEEecccCCCCcccCCHHHHHHHHH
Confidence 6651 01277788753 1134689999999997410 0112446666554444997777 999999
Q ss_pred HHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCC
Q 038818 255 IAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASD 334 (486)
Q Consensus 255 i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~ 334 (486)
+|++||+++++|++|+++....+.......++ ..|.+ +++|+++....+|+++.+++ .. +.+.. .. .
T Consensus 228 l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~di~--s~sK~~~~GlriG~~~~~~~-~~-~~l~~---~~-~---- 294 (426)
T 1sff_A 228 LCDEHGIMLIADEVQSGAGRTGTLFAMEQMGV-APDLT--TFAKSIAGGFPLAGVTGRAE-VM-DAVAP---GG-L---- 294 (426)
T ss_dssp HHHHHTCEEEEECTTTTTTTTSSSSGGGGTTS-CCSEE--EECGGGGTSSCCEEEEEEHH-HH-TTSCT---TS-B----
T ss_pred HHHHcCCEEEEechhhccCcccchhhhhhcCC-CCCEE--EEcccccCCCceEEEEEcHH-HH-hhhcc---CC-c----
Confidence 99999999999999986322111111011111 36655 55699986555799988753 22 22210 00 0
Q ss_pred CCCccCCCCccccCCCCCCch---HHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhC----CCCeEEecCCCeeEEEEE
Q 038818 335 SKQVVDYKDWQITLSRRFRAL---KLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGG----DNRFEIVAPRNFAVVCFR 407 (486)
Q Consensus 335 ~~~~~~~~~~~~~~sr~~~~l---~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~ 407 (486)
..+.....+ ++..+++.+..+ +..++..++++++++.|++ ++.+... ++..+++.+.
T Consensus 295 ------------~~~~~~~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~ 358 (426)
T 1sff_A 295 ------------GGTYAGNPIACVAALEVLKVFEQE---NLLQKANDLGQKLKDGLLAIAEKHPEIGDV-RGLGAMIAIE 358 (426)
T ss_dssp ------------CCSSSSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHTCTTEEEE-EEETTEEEEE
T ss_pred ------------CcCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEE
Confidence 000011223 333344443222 3556677777777777765 4444332 2335677777
Q ss_pred eecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 408 VLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
+.+.... .........++.+.|.++|+.+..+.. ...++|+++ ...+++++++++++.|+++++++
T Consensus 359 ~~~~~~~------~~~~~~~~~~l~~~l~~~gi~v~~~~~--~~~~iRi~~-~~~~~~~~i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 359 LFEDGDH------NKPDAKLTAEIVARARDKGLILLSCGP--YYNVLRILV-PLTIEDAQIRQGLEIISQCFDEA 424 (426)
T ss_dssp EBGGGCT------TSBCHHHHHHHHHHHHHTTEECEEEST--TSCEEEECC-CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EecCccc------cCCChHHHHHHHHHHHHCCcEEecCCC--CCCEEEEEC-CccCCHHHHHHHHHHHHHHHHHH
Confidence 7431000 000022345677788888875433322 246899998 35778889999999999988765
No 177
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.83 E-value=3.3e-18 Score=174.01 Aligned_cols=318 Identities=11% Similarity=-0.028 Sum_probs=187.5
Q ss_pred hHHHHHHHHHHHHHHcCCCC-CCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHH
Q 038818 111 ATELENIVMDWLGEMLKLPK-SFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAA 189 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~-~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~ 189 (486)
......++.++++++++... + ..++|+||++|+..++.+++... .++.+|+.....|.+...++
T Consensus 84 ~~~~~~~l~~~la~~~~~~~~~-------~v~~~~ggsea~~~al~~~~~~~--------~~~~vi~~~~~yhg~~~~~~ 148 (439)
T 3dxv_A 84 SNAPAVTLAERLLASFPGEGTH-------KIWFGHSGSDANEAAYRAIVKAT--------GRSGVIAFAGAYHGCTVGSM 148 (439)
T ss_dssp EEHHHHHHHHHHHHTTTCTTTE-------EEEEESSHHHHHHHHHHHHHHHH--------SCCEEEEETTCCCCSSHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCCC-------EEEEeCCHHHHHHHHHHHHHHHh--------CCCEEEEECCCCCCCcHHHH
Confidence 45667788899999986543 3 68999999999999999876532 04556666666676666555
Q ss_pred HHcCCCC--C---------CeEEEecCCCCCccc-----CHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----c
Q 038818 190 QIAGIDP--K---------NFRAIKTTKSSSFTL-----TPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----L 249 (486)
Q Consensus 190 ~~~G~g~--~---------~v~~v~~d~~~~~~~-----d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l 249 (486)
...|... - .+..+|.+. .+.. |+++|+++|++. ....+.+|+++...+++|.+.| +
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~le~~l~~~--~~~~~~~vi~~p~~~~~G~~~~~~~~l 224 (439)
T 3dxv_A 149 AFSGHSVQADAAKADGLILLPYPDPYRP--YRNDPTGDAILTLLTEKLAAV--PAGSIGAAFIEPIQSDGGLIVPPDGFL 224 (439)
T ss_dssp CC-------------CEEEECCCCSSSC--BTTBTTSHHHHHHHHHHHHTS--CTTCEEEEEECSSBSTTTSBCCCTTHH
T ss_pred hhcCCCchhhccccCCCCCCcEEcCCCc--ccccccHHHHHHHHHHHHHhc--CCCCEEEEEEccccCCCCCccCCHHHH
Confidence 4444310 0 013344332 1122 799999998511 1223567888888888999988 9
Q ss_pred hHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCccccc
Q 038818 250 GPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLR 329 (486)
Q Consensus 250 ~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~ 329 (486)
++|+++|++||+++++|++|+++............++ ..|.+ ++.|.+++....|+++.+++ .. +.+.. ..
T Consensus 225 ~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~-~~di~--s~sK~~~~G~riG~~~~~~~-~~-~~~~~---~~- 295 (439)
T 3dxv_A 225 RKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGF-VPDIL--VLGKGLGGGLPLSAVIAPAE-IL-DCASA---FA- 295 (439)
T ss_dssp HHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTC-CCSEE--EECGGGGTTSCCEEEEEEHH-HH-TSCSS---SS-
T ss_pred HHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCC-CCCEE--EEcchhcCCcceEEEEECHH-HH-hhhcC---CC-
Confidence 9999999999999999999986321111011111122 35666 45699987667888887543 22 11110 00
Q ss_pred CccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhC----CCCeEEecCCCeeEEE
Q 038818 330 NKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGG----DNRFEIVAPRNFAVVC 405 (486)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~ 405 (486)
...+- ...+.+.+++..+..-.-+++.++..++.+++++.|.+ ++.+... ++...++.
T Consensus 296 ----------------~~~t~-~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~ 357 (439)
T 3dxv_A 296 ----------------MQTLH-GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDI-RGRGLACG 357 (439)
T ss_dssp ----------------CCTTT-TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEE
T ss_pred ----------------cCCCc-ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEE
Confidence 00111 23344444444331111134556666666666666654 4544443 23345566
Q ss_pred EEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 406 FRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 406 f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
+.+...... .........++.+.+.++|+++.... ....++|+++ +...++++++++++.|+++++++.
T Consensus 358 ~~~~~~~~~------~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~~~ 426 (439)
T 3dxv_A 358 MELVCDRQS------REPARAETAKLIYRAYQLGLVVYYVG--MNGNVLEFTP-PLTITETDIHKALDLLDRAFSELS 426 (439)
T ss_dssp EEEEEETTT------TEECHHHHHHHHHHHHHHTEECEEES--TTSCEEEECC-CTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred EEEecCccc------cCCCHHHHHHHHHHHHHCCcEEeecC--CCCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHh
Confidence 655321100 00013345567778888897543332 1246899987 457788899999999999988763
No 178
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.83 E-value=3.1e-19 Score=179.28 Aligned_cols=358 Identities=9% Similarity=0.021 Sum_probs=212.4
Q ss_pred HHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHHHHHHhhcC-CCccccccChhhHHHHHHHHHHHHHHcCCC--C
Q 038818 54 ETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGEMLSSGFN-VVGFNWMSSPAATELENIVMDWLGEMLKLP--K 130 (486)
Q Consensus 54 ~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n-~~~~~~~~~~~~~~le~~~~~~l~~l~g~~--~ 130 (486)
..+.+.+...-.+...+.....|+++...++..+. +.+.+..... .....|....+..++.+.+.+|+.+..|.+ +
T Consensus 16 ~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~-v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~ 94 (401)
T 7aat_A 16 LGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNC-VRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKS 94 (401)
T ss_dssp HHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHH-HHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHT
T ss_pred HHHHHHHhhCCCCCceeeeeeeEECCCCCEechHH-HHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCcccccc
Confidence 34444444432233333333344444433333333 3333333332 233455555566788888888887766642 3
Q ss_pred CCccCCCcceEE--cCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCC
Q 038818 131 SFLFSGTGGGVI--QGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSS 208 (486)
Q Consensus 131 ~~~~~~~~~~~~--t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~ 208 (486)
+ +.++ |+|||+|+..++.+.+... .+++.|+++..+|.++...++..|. +++.+|++..+
T Consensus 95 ~-------~i~~v~t~G~~~al~~~~~~l~~~~--------~~gd~Vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~ 156 (401)
T 7aat_A 95 G-------RYVTVQGISGTGSLRVGANFLQRFF--------KFSRDVYLPKPSWGNHTPIFRDAGL---QLQAYRYYDPK 156 (401)
T ss_dssp T-------CEEEEEEEHHHHHHHHHHHHHHHHC--------TTCCEEEEEESCCTTHHHHHHHTTC---EEEEEECEETT
T ss_pred C-------ceEEEecCcchHHHHHHHHHHHHhc--------cCCCEEEEcCCCchhHHHHHHHcCC---eeEeeeeeccc
Confidence 2 5666 9999999988876654321 1567788888999999999999999 99999986434
Q ss_pred CcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc---CCchHHHHHHHHhCceEEeeccccchhccCcc-----ch
Q 038818 209 SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV---DPLGPLCDIAKRYSIWVHVDAAYAGSACICPE-----FR 280 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i---dpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~-----~~ 280 (486)
++.+|++.+++.+++ . ...+.+|+++.++|+||.+ +++++|+++|++||+++++|.+|..+...... ..
T Consensus 157 ~~~~d~~~l~~~l~~-~--~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~ 233 (401)
T 7aat_A 157 TCSLDFTGAMEDISK-I--PEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALR 233 (401)
T ss_dssp TTEECHHHHHHHHTT-S--CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHH
T ss_pred cCccCHHHHHHHHHh-C--CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHH
Confidence 679999999988875 2 1235678889999999966 55889999999999999999999765432110 11
Q ss_pred hhhcCCCCCCceeeccccccCCC-CcceEEEe--eCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHH
Q 038818 281 HFIDGIEGADSFSLNAHKWFFTT-LDCCCLWV--KNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKL 357 (486)
Q Consensus 281 ~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~--~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~ 357 (486)
.. .....-..++.+++|.++.| ..+|++++ .++............+.... .. ...+...
T Consensus 234 ~~-~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~--------------~~---~~~~~~~ 295 (401)
T 7aat_A 234 HF-IEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPM--------------YS---NPPMNGA 295 (401)
T ss_dssp HH-HHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHH--------------HS---SCCHHHH
T ss_pred HH-HhcCCcEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhc--------------cC---CCChHHH
Confidence 11 11123446778899999744 34788776 23332111100000000000 00 0112222
Q ss_pred HHHHHHhc--------hHHHHHHHHHHHHHHHHHHHHHhCCC---CeEEecCCCeeEEEEEeecCCCCCCCCCCccchHH
Q 038818 358 WLVLRSFG--------VANLRNFLRSHVRMAQLFQELVGGDN---RFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANE 426 (486)
Q Consensus 358 ~~~l~~~g--------~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~ 426 (486)
..+...+. .+.++++.++..++++++.+.|+++. ++++. +|..+.+.|.-.+ .
T Consensus 296 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~--------------~- 359 (401)
T 7aat_A 296 RIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHI-TDQIGMFCFTGLK--------------P- 359 (401)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHH-HHCCSSEEECCCC--------------H-
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcee-cCCcceEEecCCC--------------H-
Confidence 22222221 34466777888889999999998762 34433 3344555542111 1
Q ss_pred HHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 427 LNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 427 ~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
+.+...+.+.|+. +.+ .+|++++. .+++ +|+++++.|++++
T Consensus 360 --~~~~~ll~~~gi~-v~~-------~~Ris~~~-~~~~-~i~~~~~~l~~~~ 400 (401)
T 7aat_A 360 --EQVERLTKEFSIY-MTK-------DGRISVAG-VASS-NVGYLAHAIHQVT 400 (401)
T ss_dssp --HHHHHHHHHHCEE-CCT-------TCEEEGGG-CCTT-THHHHHHHHHHHH
T ss_pred --HHHHHHHHhCCEe-ccC-------CCeEEecc-CChh-hHHHHHHHHHHHh
Confidence 1222223455764 332 27999853 4444 6999999998875
No 179
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.82 E-value=1.6e-19 Score=182.02 Aligned_cols=355 Identities=10% Similarity=-0.009 Sum_probs=213.1
Q ss_pred HHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHHHHHHh-hcCCC-ccccccChhhHHHHHHHHHHHHHHcCC--
Q 038818 53 IETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGEMLSS-GFNVV-GFNWMSSPAATELENIVMDWLGEMLKL-- 128 (486)
Q Consensus 53 ~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~-~~n~~-~~~~~~~~~~~~le~~~~~~l~~l~g~-- 128 (486)
...+.+.+.+.-.+.........|+++..... ++..+.+.+.. .+... ...|...+...++++.+.+|+.+..|.
T Consensus 16 ~~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~-~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~ 94 (412)
T 1yaa_A 16 LFGIKQRYGQDQRATKVDLGIGAYRDDNGKPW-VLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDAL 94 (412)
T ss_dssp THHHHHHHHTCCCSSCEECSSCCCBCTTSCBC-CCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHhcCCCCCeEEEeeeeeeCCCCCCC-CcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCCCC
Confidence 44566655543112233333434433332222 23345555555 55422 234544555778888888888665553
Q ss_pred CCCCccCCCcceEE--cCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEec-C
Q 038818 129 PKSFLFSGTGGGVI--QGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKT-T 205 (486)
Q Consensus 129 ~~~~~~~~~~~~~~--t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~-d 205 (486)
+++ ..++ |+||++|+..++...+.. . +++.|+++..+|.++...++..|. +++.+|. +
T Consensus 95 ~~~-------~i~~~~t~g~~~a~~~~~~~~~~~--~-------~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~ 155 (412)
T 1yaa_A 95 QED-------RVISVQSLSGTGALHISAKFFSKF--F-------PDKLVYLSKPTWANHMAIFENQGL---KTATYPYWA 155 (412)
T ss_dssp HTT-------CEEEEEEEHHHHHHHHHHHHHHHH--C-------TTCCEEEEESCCTTHHHHHHTTTC---CEEEEECEE
T ss_pred Ccc-------eEEEEeccchHhHHHHHHHHHHHh--C-------CCCEEEEeCCCCccHHHHHHHcCc---eEEEEeeec
Confidence 222 6788 999999998775443321 0 455677888899999999999999 9999998 5
Q ss_pred CCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHHHhCceEEeeccccchhccC---c--
Q 038818 206 KSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAKRYSIWVHVDAAYAGSACIC---P-- 277 (486)
Q Consensus 206 ~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~---~-- 277 (486)
+ +++.+|+++|++++++.. ....+++.+.++|++|.+-| +++|+++|++||+++++|++|+++.... +
T Consensus 156 ~-~~~~~d~~~l~~~l~~~~---~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 231 (412)
T 1yaa_A 156 N-ETKSLDLNGFLNAIQKAP---EGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAY 231 (412)
T ss_dssp T-TTTEECHHHHHHHHHHSC---TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTH
T ss_pred C-CCCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhH
Confidence 3 256899999999997531 11345566999999999854 6788999999999999999996543321 1
Q ss_pred cchhhhcCCCC---CCceeeccccccCC-CCcceEEE--e----eCch----HHHHHhcCCcccccCccCCCCCccCCCC
Q 038818 278 EFRHFIDGIEG---ADSFSLNAHKWFFT-TLDCCCLW--V----KNPN----ALIKALSTNPEFLRNKASDSKQVVDYKD 343 (486)
Q Consensus 278 ~~~~~~~~~~~---aDsi~~~~hK~l~~-p~~~g~~~--~----~~~~----~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 343 (486)
..... ..... -+.+..+++|.++. ...+|+++ . +++. ... .+.. ....
T Consensus 232 ~~~~~-~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~-~l~~---~~~~------------- 293 (412)
T 1yaa_A 232 AVRLG-VEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTS-QLAK---IIRS------------- 293 (412)
T ss_dssp HHHHH-HHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHH-HHHH---HHHT-------------
T ss_pred HHHHH-HhcCCCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHH-HHHH---HHhh-------------
Confidence 11111 11111 23567788999874 23468877 4 2443 222 1110 0000
Q ss_pred ccccCCCCCCchHHHHHHHHhc--------hHHHHHHHHHHHHHHHHHHHHHhCCC---CeEEecCCCeeEEEEEeecCC
Q 038818 344 WQITLSRRFRALKLWLVLRSFG--------VANLRNFLRSHVRMAQLFQELVGGDN---RFEIVAPRNFAVVCFRVLPSA 412 (486)
Q Consensus 344 ~~~~~sr~~~~l~~~~~l~~~g--------~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~v~f~~~~~~ 412 (486)
+.. ....+..+++.+.+. .++++++.++..++++++.+.|++++ ++++. ++..+++.|. ...
T Consensus 294 -~~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~--~~~ 366 (412)
T 1yaa_A 294 -EVS---NPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHI-VNQCGMFSFT--GLT 366 (412)
T ss_dssp -TTS---SCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHH-HHCCSSEEEC--CCC
T ss_pred -ccC---CCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeee-ccCceEEEee--CCC
Confidence 000 012233333333331 24677788888899999999998764 36654 3344454442 110
Q ss_pred CCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 413 SGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
. ..+...+.+.|+. +.+ ++|+++.. .+++++++++++|+++++.
T Consensus 367 ------------~---~~~~~~l~~~gi~-v~~-------~~Ris~~~--~~~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 367 ------------P---QMVKRLEETHAVY-LVA-------SGRASIAG--LNQGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp ------------H---HHHHHHHHHHCEE-CCT-------TSEEEGGG--CCTTTHHHHHHHHHHHHHH
T ss_pred ------------H---HHHHHHHHhCCEE-ecc-------CcEEEEcc--CCHhHHHHHHHHHHHHHHh
Confidence 1 2343334456764 333 47999853 4677999999999998764
No 180
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.82 E-value=7.5e-19 Score=178.08 Aligned_cols=317 Identities=10% Similarity=-0.020 Sum_probs=192.5
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHH--HHHHHHHHHHHHHc---cccCCCCeEEEec
Q 038818 104 NWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAIL--CTLAAARDQILNEI---GRENISRLVVYGS 178 (486)
Q Consensus 104 ~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~--~al~~a~~~~~~~~---~~~~~~~~~v~~s 178 (486)
.|.......++++ .++++++++++ ..++|+|+++++. .++.+..... .. .+...+++.|+++
T Consensus 73 ~Y~~~~g~~~lr~----~ia~~~~~~~~-------~i~~t~G~~~al~~~~~~~~l~~~~--~g~~~~~~~~~gd~V~v~ 139 (427)
T 3ppl_A 73 NYGGLDGIVDIRQ----IWADLLGVPVE-------QVLAGDASSLNIMFDVISWSYIFGN--NDSVQPWSKEETVKWICP 139 (427)
T ss_dssp SSCCSSCCHHHHH----HHHHHHTSCGG-------GEEECSSCHHHHHHHHHHHHHHHCC--TTCSSCGGGSSCCEEEEE
T ss_pred CCCCCCCcHHHHH----HHHHHhCCCcc-------eEEEeCCcHHHHHHHHHHHHHhccC--CcccccccCCCCCEEEEc
Confidence 3433334455554 45555577655 7899999999884 4444443300 00 0000016778889
Q ss_pred CCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEee-cCCccccccCCch---HHHH
Q 038818 179 DQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCAT-VGTTAITTVDPLG---PLCD 254 (486)
Q Consensus 179 ~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~-~gtt~~G~idpl~---~I~~ 254 (486)
..+|.++...++..|. +++.+|+++ + .+|+++|+++++.. .+.+|+++ .++|++|.+-|.+ +|++
T Consensus 140 ~p~y~~~~~~~~~~g~---~~~~v~~~~--~-g~d~~~l~~~l~~~-----~~~~v~~~p~~~NPtG~~~~~~~~~~l~~ 208 (427)
T 3ppl_A 140 VPGYDRHFSITERFGF---EMISVPMNE--D-GPDMDAVEELVKNP-----QVKGMWVVPVFSNPTGFTVTEDVAKRLSA 208 (427)
T ss_dssp ESCCHHHHHHHHHTTC---EEEEEEEET--T-EECHHHHHHHTTST-----TEEEEEECCSSCTTTCCCCCHHHHHHHHH
T ss_pred CCCcHHHHHHHHHcCC---EEEEeCCCC--C-CCCHHHHHHHHhcC-----CCeEEEECCCCCCCCCccCCHHHHHHHHH
Confidence 9999999999999999 999999985 3 39999999988421 23456555 7899999998877 8888
Q ss_pred HH-HHhCceEEeeccccchhccCcc-----chhhh--cCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcc
Q 038818 255 IA-KRYSIWVHVDAAYAGSACICPE-----FRHFI--DGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPE 326 (486)
Q Consensus 255 i~-~~~g~~lhvD~a~g~~~~~~~~-----~~~~~--~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~ 326 (486)
+| ++||+++|+|++|+...+.... ..... .+....+.+..+++|+++.+.++|+++.++ .... .+.....
T Consensus 209 ~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~-~l~~-~~~~~~~ 286 (427)
T 3ppl_A 209 METAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSA-ENRK-WYTGHAG 286 (427)
T ss_dssp CCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCH-HHHH-HHHHHHH
T ss_pred HHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCH-HHHH-HHHHHhh
Confidence 88 9999999999999764322111 11100 012345677889999976667788777653 3322 1110000
Q ss_pred cccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhch-----HHHHHHHHHHHHHHHHHHHHH----hCCCCeEEec
Q 038818 327 FLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGV-----ANLRNFLRSHVRMAQLFQELV----GGDNRFEIVA 397 (486)
Q Consensus 327 y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~-----~g~~~~~~~~~~~a~~l~~~L----~~~~~~~~~~ 397 (486)
+. +.....+..+++...+.. +.+++..+...+..+.+.+.| ..++++++..
T Consensus 287 ~~--------------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~ 346 (427)
T 3ppl_A 287 IR--------------------GIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTV 346 (427)
T ss_dssp HH--------------------CSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECC
T ss_pred cc--------------------cCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeC
Confidence 00 001123333444444332 223444444444555555554 4344577654
Q ss_pred CCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeee-E-----CCEeEEEEEecCCCCcHHHHHHH
Q 038818 398 PRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGM-V-----AGIYFIRFAVGATLTEDRHVIAA 471 (486)
Q Consensus 398 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~-----~~~~~lR~~~~~~~tt~~did~~ 471 (486)
+.....+.+.+... + ..++.+.+.++|+.+.++.. + .+.+++|+++.. .++++|+++
T Consensus 347 p~~g~~~~~~~~~~-------------~--~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~--~~~~~i~~~ 409 (427)
T 3ppl_A 347 PAGGYFISLDVVPG-------------T--ASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSL--PPVEELEVA 409 (427)
T ss_dssp CSBSSCEEEECSTT-------------C--HHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSS--SCHHHHHHH
T ss_pred CCccEEEEEECCcc-------------h--HHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCC--CCHHHHHHH
Confidence 44445555665431 1 24566677778875433121 1 246789999943 378899999
Q ss_pred HHHHHHHHHHHh
Q 038818 472 WKVVQEKLDGIL 483 (486)
Q Consensus 472 i~~l~~~~~~l~ 483 (486)
++.|.++++++.
T Consensus 410 ~~~l~~~l~~~~ 421 (427)
T 3ppl_A 410 MDGVATCVLLAA 421 (427)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999987664
No 181
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.82 E-value=4.1e-19 Score=178.62 Aligned_cols=304 Identities=13% Similarity=0.035 Sum_probs=183.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHc
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIA 192 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 192 (486)
....++.+++++++|.+ .+++|+|||+|+..++.+++...... +..+ ++.+|+.+...|.+...+....
T Consensus 81 ~~~~~l~~~la~~~~~~---------~v~~~~gg~~a~~~al~~~~~~~~~~-~~~g-~~~vi~~~~~y~~~~~~~~~~~ 149 (406)
T 4adb_A 81 EPVLRLAKKLIDATFAD---------RVFFCNSGAEANEAALKLARKFAHDR-YGSH-KSGIVAFKNAFHGRTLFTVSAG 149 (406)
T ss_dssp HHHHHHHHHHHHHSSCS---------EEEEESSHHHHHHHHHHHHHHHHHHH-TCTT-CCEEEEETTCCCCSSHHHHHHS
T ss_pred HHHHHHHHHHHhhCCCC---------eEEEeCcHHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCCcHHHhhcc
Confidence 44566778899998754 57999999999999998876532211 1010 2445555555565555555554
Q ss_pred CCCC---------CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc-----CCchHHHHHHHH
Q 038818 193 GIDP---------KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV-----DPLGPLCDIAKR 258 (486)
Q Consensus 193 G~g~---------~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i-----dpl~~I~~i~~~ 258 (486)
+... ..+..+|. .|+++|++++++. +.+|+++ +.+++|.+ +++++|.++|++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~ 215 (406)
T 4adb_A 150 GQPAYSQDFAPLPADIRHAAY-------NDINSASALIDDS------TCAVIVE-PIQGEGGVVPASNAFLQGLRELCNR 215 (406)
T ss_dssp SCGGGTGGGCSCCSSEEEECT-------TCHHHHHTTCSTT------EEEEEEC-SEETTTTSEECCHHHHHHHHHHHHH
T ss_pred CCccccccCCCCCCCceEeCC-------CcHHHHHHHhcCC------eEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHH
Confidence 4210 13444443 3899999988632 4567777 78888854 579999999999
Q ss_pred hCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCc
Q 038818 259 YSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQV 338 (486)
Q Consensus 259 ~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~ 338 (486)
||+++|+|++|+++......+.....++ ..|.+++ +|++++...+|+++.+++ ... .+.. ....
T Consensus 216 ~~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~t~--sK~~~~G~r~G~~~~~~~-~~~-~~~~---~~~~-------- 279 (406)
T 4adb_A 216 HNALLIFDEVQTGVGRTGELYAYMHYGV-TPDLLTT--AKALGGGFPVGALLATEE-CAR-VMTV---GTHG-------- 279 (406)
T ss_dssp TTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECHH-HHH-TCCT---TSSC--------
T ss_pred cCCEEEEeccccCCCccchhHHHHhcCC-CCCEEEe--chhhcCCCCeEEEEEcHH-HHh-hhcc---CCcC--------
Confidence 9999999999975422211111111122 4677765 999996566888776543 322 2211 0000
Q ss_pred cCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC----CCeEEecCCCeeEEEEEeecCCCC
Q 038818 339 VDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGD----NRFEIVAPRNFAVVCFRVLPSASG 414 (486)
Q Consensus 339 ~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~~~~~~~~ 414 (486)
.+.....+.+.+++..+..-..++..++..++++++.+.|+++ +.+.-. .....++.+.+....
T Consensus 280 ---------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~-- 347 (406)
T 4adb_A 280 ---------TTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRYGLFSEV-RGLGLLIGCVLNADY-- 347 (406)
T ss_dssp ---------CSSTTCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE-EEETTEEEEEECTTT--
T ss_pred ---------CCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEE-EEEEEEEEEEEeCCc--
Confidence 0001223333333333211111566777788888888888764 111111 112345666665321
Q ss_pred CCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 415 LGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 415 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
.....++.+.+.++|+.+. + .+..++|+++ +..+++++++++++.|+++++++.+
T Consensus 348 ----------~~~~~~~~~~l~~~gi~v~-~---~~~~~iRi~~-~~~~~~e~i~~~~~~l~~~l~~~~~ 402 (406)
T 4adb_A 348 ----------AGQAKQISQEAAKAGVMVL-I---AGGNVVRFAP-ALNVSEEEVTTGLDRFAAACEHFVS 402 (406)
T ss_dssp ----------TTCHHHHHHHHHHTTEECE-E---SSTTEEEECC-CTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred ----------HHHHHHHHHHHHHCCcEEe-e---cCCCeEEEEC-CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 0013466777777887533 2 2356899987 4677889999999999999987764
No 182
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.82 E-value=6.6e-19 Score=176.92 Aligned_cols=210 Identities=13% Similarity=0.088 Sum_probs=144.0
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHH----HHHc
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKA----AQIA 192 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a----~~~~ 192 (486)
++++.+++++|.+. .+++++|++|+..++. ... +++.|+++...|.+.... ++..
T Consensus 71 ~l~~~la~~~g~~~---------~i~~~sG~~ai~~~~~-l~~-----------~gd~Vl~~~~~y~~~~~~~~~~~~~~ 129 (403)
T 3cog_A 71 CLEKAVAALDGAKY---------CLAFASGLAATVTITH-LLK-----------AGDQIICMDDVYGGTNRYFRQVASEF 129 (403)
T ss_dssp HHHHHHHHHHTCSE---------EEEESCHHHHHHHHHT-TSC-----------TTCEEEEESSCCHHHHHHHHHTGGGG
T ss_pred HHHHHHHHHhCCCc---------EEEECCHHHHHHHHHH-HhC-----------CCCEEEEeCCCcchHHHHHHHHHHHc
Confidence 34455677777652 3556666788876665 321 566788888999875543 3567
Q ss_pred CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhC-ceEEeeccccc
Q 038818 193 GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYS-IWVHVDAAYAG 271 (486)
Q Consensus 193 G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g-~~lhvD~a~g~ 271 (486)
|+ +++.+|.+ |+++|+++|+++ +.+|+++.++|++|.+.|+++|+++|+++| +++++|++|+.
T Consensus 130 G~---~v~~v~~~-------d~~~l~~~i~~~------t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~ 193 (403)
T 3cog_A 130 GL---KISFVDCS-------KIKLLEAAITPE------TKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMS 193 (403)
T ss_dssp TC---EEEEECTT-------SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTC
T ss_pred CC---EEEEECCC-------CHHHHHHhcCcC------CeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcc
Confidence 88 88888763 889999888653 457888999999999999999999999999 99999999987
Q ss_pred hhccCccchhhhcCCCCCCceeeccccccCCCCc--ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCC
Q 038818 272 SACICPEFRHFIDGIEGADSFSLNAHKWFFTTLD--CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLS 349 (486)
Q Consensus 272 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~s 349 (486)
+....+ . . .++|.++.++||++++|.+ +|+++.+++............ . +
T Consensus 194 ~~~~~~-~----~--~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~-~--------------------g 245 (403)
T 3cog_A 194 PYFQRP-L----A--LGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNS-L--------------------G 245 (403)
T ss_dssp TTTCCT-T----T--TTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHH-H--------------------C
T ss_pred cccCCc-c----c--cCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHh-c--------------------C
Confidence 653222 1 1 2689999999999998876 588888765543321110000 0 0
Q ss_pred CCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCe
Q 038818 350 RRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRF 393 (486)
Q Consensus 350 r~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~ 393 (486)
-....+..|+.++.+ +.+..+.++..+++..+.+.|++.+.+
T Consensus 246 ~~~~~~~~~~~~~~l--~~l~~r~~~~~~n~~~l~~~l~~~~~v 287 (403)
T 3cog_A 246 AVPSPIDCYLCNRGL--KTLHVRMEKHFKNGMAVAQFLESNPWV 287 (403)
T ss_dssp CCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred CCCCHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 012345556665544 345556677777777777777766443
No 183
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.82 E-value=4.9e-19 Score=179.02 Aligned_cols=303 Identities=12% Similarity=0.049 Sum_probs=186.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.....++.+++++++|. + .+++++|||+|+..++.+++...... +..+ ++.+|+.+...|.+...++..
T Consensus 98 ~~~~~~l~~~la~~~g~--~-------~v~~~~ggteA~~~al~~~~~~~~~~-~~~g-~~~vi~~~~~yh~~~~~~~~~ 166 (420)
T 2pb2_A 98 NEPALRLGRKLIDATFA--E-------RVLFMNSGTEANETAFKLARHYACVR-HSPF-KTKIIAFHNAFHGRSLFTVSV 166 (420)
T ss_dssp CHHHHHHHHHHHHHSSC--S-------EEEEESSHHHHHHHHHHHHHHHHHHH-TCTT-CCEEEEETTCCCCSSHHHHHH
T ss_pred CHHHHHHHHHHHhhCCC--C-------eEEEeCCHHHHHHHHHHHHHHHhhhc-cCCC-CCEEEEEeCCcCCcCHHHHHh
Confidence 35566777888888873 2 58999999999999999887642211 1111 124444555566666666666
Q ss_pred cCCC---------CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc----cCCchHHHHHHHH
Q 038818 192 AGID---------PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT----VDPLGPLCDIAKR 258 (486)
Q Consensus 192 ~G~g---------~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~----idpl~~I~~i~~~ 258 (486)
.|.. ...+..+|. .|+++|+++|++. +.+|+++.+++++|. .+++++|+++|++
T Consensus 167 ~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i~~~------~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~ 233 (420)
T 2pb2_A 167 GGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVMDDH------TCAVVVEPIQGEGGVQAATPEFLKGLRDLCDE 233 (420)
T ss_dssp SSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHHHH
T ss_pred cCCccccccCCCCCCCeEEecC-------CCHHHHHHHhccC------ceEEEEeCCcCCCCeecCCHHHHHHHHHHHHH
Confidence 5541 012555553 2899999988642 456777777666665 3789999999999
Q ss_pred hCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCc
Q 038818 259 YSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQV 338 (486)
Q Consensus 259 ~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~ 338 (486)
||+++++|++|.++......+.....++ ..|.+++ +|+++++.++|+++++++ .. +.+.. ... .
T Consensus 234 ~gi~lI~Dev~~g~~~~g~~~~~~~~~~-~~diit~--sK~l~~G~~iG~~~~~~~-l~-~~l~~--~~~-~-------- 297 (420)
T 2pb2_A 234 HQALLVFDEVQCGMGRTGDLFAYMHYGV-TPDILTS--AKALGGGFPVSAMLTTQE-IA-SAFHV--GSH-G-------- 297 (420)
T ss_dssp TTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECHH-HH-TTCC-------C--------
T ss_pred cCCEEEEEcCCcCcccCCcHHHHHhcCC-CCCeEEe--cccccCCCceEEEEEhHH-HH-HhhcC--CCc-C--------
Confidence 9999999999965322111111111122 4677754 799997778999988754 22 22211 000 0
Q ss_pred cCCCCccccCCCCCCchH---HHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC----CCeEEecCCCeeEEEEEeecC
Q 038818 339 VDYKDWQITLSRRFRALK---LWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGD----NRFEIVAPRNFAVVCFRVLPS 411 (486)
Q Consensus 339 ~~~~~~~~~~sr~~~~l~---~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~~~~~ 411 (486)
.+. ....+. +..+++.+.. +++.++..++++++.+.|+++ |.+..+ ++...++.+.+...
T Consensus 298 -----~t~----~~~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~v~~~~~ 364 (420)
T 2pb2_A 298 -----STY----GGNPLACAVAGAAFDIINT---PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDI-RGMGLLIGAELKPK 364 (420)
T ss_dssp -----CEE----CCCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE-EEETTEEEEEECGG
T ss_pred -----ccc----CcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EecceEEEEEECCC
Confidence 011 112333 3334444433 356677788888888888664 433322 23345666766431
Q ss_pred CCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 412 ASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
. .....++.+.+.++|+++. +. +..++|+++ ...++++|++++++.|+++++++.+
T Consensus 365 ~------------~~~~~~l~~~l~~~Gi~v~-~~---~~~~iRl~~-~~~~t~eei~~~~~~l~~~l~~~~~ 420 (420)
T 2pb2_A 365 Y------------KGRARDFLYAGAEAGVMVL-NA---GADVMRFAP-SLVVEEADIHEGMQRFAQAVGKVVA 420 (420)
T ss_dssp G------------TTCHHHHHHHHHHTTEECE-ES---STTEEEECC-CTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred c------------hHHHHHHHHHHHHCCCEEE-eC---CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 0 0013456777777887433 32 246899997 3577889999999999999887753
No 184
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.82 E-value=1.1e-18 Score=176.55 Aligned_cols=319 Identities=11% Similarity=0.010 Sum_probs=191.0
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHH-HHHHHHHHHHHH-HccccC--C-CCeEEEec
Q 038818 104 NWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAIL-CTLAAARDQILN-EIGREN--I-SRLVVYGS 178 (486)
Q Consensus 104 ~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~-~al~~a~~~~~~-~~~~~~--~-~~~~v~~s 178 (486)
.|....+..++++.+ ++.+|.+++ ..++|+|++++++ ..+..+... + ..|... . .+..|++.
T Consensus 71 ~Y~~~~G~~~lr~~i----a~~~~~~~~-------~i~~t~G~~~al~l~~~~~~l~~--~~~~g~~~~~~~d~~~Vl~~ 137 (422)
T 3d6k_A 71 NYGGLLGIADIRELW----AEALGLPAD-------LVVAQDGSSLNIMFDLISWSYTW--GNNDSSRPWSAEEKVKWLCP 137 (422)
T ss_dssp SSCCSSCCHHHHHHH----HHHHTCCGG-------GEEECSSCHHHHHHHHHHHHHHH--CCTTCSSCGGGSSCCEEEEE
T ss_pred CCCCCCCCHHHHHHH----HHHhCCChh-------HEEEecchHHHHHHHHHHHHhcC--cccccccccccCCCCEEEEe
Confidence 454444455565554 455577655 7899999998873 332222211 0 000000 0 12367788
Q ss_pred CCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEE-eecCCccccccCCch---HHHH
Q 038818 179 DQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLC-ATVGTTAITTVDPLG---PLCD 254 (486)
Q Consensus 179 ~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv-~~~gtt~~G~idpl~---~I~~ 254 (486)
..+|..+..+++..|. +++.+|+++ + .+|+++|++++++. .+.+|+ .+.++|+||.+-|.+ +|++
T Consensus 138 ~p~y~~~~~~~~~~g~---~~~~v~~~~--~-g~d~~~l~~~l~~~-----~~~~v~~~~~~~NPtG~~~~~~~l~~l~~ 206 (422)
T 3d6k_A 138 VPGYDRHFTITEHFGF---EMINVPMTD--E-GPDMGVVRELVKDP-----QVKGMWTVPVFGNPTGVTFSEQTCRELAE 206 (422)
T ss_dssp ESCCHHHHHHHHHHTC---EEEEEEEET--T-EECHHHHHHHHTST-----TEEEEEECCSSCTTTCCCCCHHHHHHHHH
T ss_pred CCccHHHHHHHHHcCC---EEEecCCCC--C-CCCHHHHHHHHhcC-----CCeEEEEcCCCCCCCCCCCCHHHHHHHHH
Confidence 8999999999999999 999999975 3 39999999988641 134555 678999999998876 7888
Q ss_pred HHH-HhCceEEeeccccc-hhccCc-cchhhh-----cCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcc
Q 038818 255 IAK-RYSIWVHVDAAYAG-SACICP-EFRHFI-----DGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPE 326 (486)
Q Consensus 255 i~~-~~g~~lhvD~a~g~-~~~~~~-~~~~~~-----~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~ 326 (486)
+|+ +||+++++|++|+. .+.... ...... .+....+.+..+++|++.....+|+++.++ +... .+.....
T Consensus 207 ~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~~-~l~~-~l~~~~~ 284 (422)
T 3d6k_A 207 MSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASSK-ENIE-WYASHAN 284 (422)
T ss_dssp CCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECCH-HHHH-HHHHHHH
T ss_pred HHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEEEeCH-HHHH-HHHHHHH
Confidence 888 99999999999973 221111 111110 112234577788999954445689888763 3322 2211000
Q ss_pred cccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhch-----HHHHHHHHHHHHHHHHHHHHHh----CCCCeEEec
Q 038818 327 FLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGV-----ANLRNFLRSHVRMAQLFQELVG----GDNRFEIVA 397 (486)
Q Consensus 327 y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~-----~g~~~~~~~~~~~a~~l~~~L~----~~~~~~~~~ 397 (486)
... .....+...++...+.. +.++++.+...+..+++.+.|. +++++++..
T Consensus 285 ~~~--------------------~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~ 344 (422)
T 3d6k_A 285 VRG--------------------IGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTS 344 (422)
T ss_dssp HHC--------------------SCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECC
T ss_pred hhc--------------------CCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeC
Confidence 000 01123444444444433 2344444444555555555554 344467654
Q ss_pred CCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeee-E-----CCEeEEEEEecCCCCcHHHHHHH
Q 038818 398 PRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGM-V-----AGIYFIRFAVGATLTEDRHVIAA 471 (486)
Q Consensus 398 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~-----~~~~~lR~~~~~~~tt~~did~~ 471 (486)
+.....+.+.+... + ...+.+.+.++|+.+..... + .+..++|+++.. +++++++++
T Consensus 345 p~~g~~~~~~~~~~-------------~--~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~--~~~e~i~~~ 407 (422)
T 3d6k_A 345 PTGGYFISVDVVPG-------------T--ASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSL--PPVAELEVA 407 (422)
T ss_dssp CSBSSCEEEEESTT-------------C--HHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSS--SCHHHHHHH
T ss_pred CCcceEEEEECCCC-------------C--HHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCC--CCHHHHHHH
Confidence 44445556666421 0 23456667777875433122 2 135789999853 788899999
Q ss_pred HHHHHHHHHHHhhc
Q 038818 472 WKVVQEKLDGILAT 485 (486)
Q Consensus 472 i~~l~~~~~~l~~~ 485 (486)
++.|+++++++.++
T Consensus 408 ~~~l~~~l~~~~~~ 421 (422)
T 3d6k_A 408 MDGFATCVLMAALE 421 (422)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 99999998877653
No 185
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.82 E-value=3.4e-19 Score=177.36 Aligned_cols=299 Identities=12% Similarity=0.028 Sum_probs=181.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCC---CchHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQ---THSALQKA 188 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~---~H~s~~~a 188 (486)
..+++++.+++++++|.++. ...++++|||+|+..++.+. +++.|+++.. .|+++...
T Consensus 57 ~~~~~~~~~~~a~~~g~~~~------~~~~~~~ggt~a~~~~~~~~-------------~gd~Vl~~~~~y~~~~~~~~~ 117 (374)
T 2aeu_A 57 SYFAEKVNEYGLKHLGGDEN------DKCVGFNRTSSAILATILAL-------------KPKKVIHYLPELPGHPSIERS 117 (374)
T ss_dssp HHHHHHHHHHHHHHHTCCTT------EEEEEESSHHHHHHHHHHHH-------------CCSEEEEECSSSSCCTHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCCc------ceEEEEcChHHHHHHHHHhC-------------CCCEEEEecCCCCccHHHHHH
Confidence 35667788888999998421 15799999999998887754 2344566666 46666667
Q ss_pred HHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEE-EEeecCCcccc-ccCCchHHHHHHHHhCceEEee
Q 038818 189 AQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLF-LCATVGTTAIT-TVDPLGPLCDIAKRYSIWVHVD 266 (486)
Q Consensus 189 ~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~-vv~~~gtt~~G-~idpl~~I~~i~~~~g~~lhvD 266 (486)
++..|+ +++.+ +|+++|+++ ++ .+.+ |+++.++|++| ...|+++|.++|++||+++|+|
T Consensus 118 ~~~~g~---~~~~v---------~d~~~l~~~-~~------~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~D 178 (374)
T 2aeu_A 118 CKIVNA---KYFES---------DKVGEILNK-ID------KDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVD 178 (374)
T ss_dssp HHHTTC---EEEEE---------SCHHHHHTT-CC------TTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHcCc---EEEEe---------CCHHHHHhc-CC------CccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEE
Confidence 888888 88777 278888876 32 2457 78888999999 8999999999999999999999
Q ss_pred ccccchhccCccchh-hhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCcc
Q 038818 267 AAYAGSACICPEFRH-FIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQ 345 (486)
Q Consensus 267 ~a~g~~~~~~~~~~~-~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 345 (486)
++|+.+.. .+.... ... .+.|.++.++||++++| ++|+++.+++ .... +.....+.
T Consensus 179 e~~~~~~~-~~~~~~~~~~--~~~di~~~S~sK~l~g~-~~G~~~~~~~-~~~~-l~~~~~~~----------------- 235 (374)
T 2aeu_A 179 DASGARVR-LLFNQPPALK--LGADLVVTSTDKLMEGP-RGGLLAGKKE-LVDK-IYIEGTKF----------------- 235 (374)
T ss_dssp CTTHHHHH-HHTTCCCHHH--HTCSEEEEETTSSSSSC-SCEEEEEEHH-HHHH-HHHHHHTT-----------------
T ss_pred CCcccccc-cccccCCccc--cCCcEEEecCcccccCc-ceEEEEECHH-HHHH-HHHhhccc-----------------
Confidence 99976541 011000 111 15789999999998765 7888777653 3222 11100000
Q ss_pred ccCCCCCCchHHH---HHHHHhchHHHHHHHHHHHHH----HHHHHHHHhCC---CCeEEecCCCeeEEEEEeecCCCCC
Q 038818 346 ITLSRRFRALKLW---LVLRSFGVANLRNFLRSHVRM----AQLFQELVGGD---NRFEIVAPRNFAVVCFRVLPSASGL 415 (486)
Q Consensus 346 ~~~sr~~~~l~~~---~~l~~~g~~g~~~~~~~~~~~----a~~l~~~L~~~---~~~~~~~~~~~~~v~f~~~~~~~~~ 415 (486)
+.....+.++ .++..+..+.+++..++...+ .+.+.+.|..+ +++.+...+. +.+.+......
T Consensus 236 ---~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~-g~~~~~~~~~~--- 308 (374)
T 2aeu_A 236 ---GLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPT-GFVIKRVYKDD--- 308 (374)
T ss_dssp ---TCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSS-EEEEEEEESSH---
T ss_pred ---cCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCc-eEEEEeecccc---
Confidence 0011222333 333333222334444444444 45566666654 3566544444 33333322110
Q ss_pred CCCCCccchHHHHHHHHH-HHHhcCcEEEeeeeE-CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 416 GDGKANEGANELNRKLLE-SINASGQLYVSHGMV-AGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 416 ~~~~~~~~~~~~~~~l~~-~l~~~g~~~~~~~~~-~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
...... ..++.. .+.+.|+++.++..+ .+..++|++++....++.+++++.++|+++++++.+
T Consensus 309 -----~~~~~~-~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~~~ 373 (374)
T 2aeu_A 309 -----TINIKK-LIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAFK 373 (374)
T ss_dssp -----HHHHHH-HHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHTC
T ss_pred -----cccccc-hHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 000000 112333 334568754433222 235689999976566666799999999999988865
No 186
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.82 E-value=6.7e-18 Score=171.20 Aligned_cols=309 Identities=11% Similarity=-0.032 Sum_probs=185.3
Q ss_pred HHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecC-CCchHHHHHHHHcC
Q 038818 115 ENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSD-QTHSALQKAAQIAG 193 (486)
Q Consensus 115 e~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~-~~H~s~~~a~~~~G 193 (486)
..++.+.++++++.+.+ .+++|+|||+|+..++.+++... +.. |.++..|++.. ..|.+...++...|
T Consensus 88 ~~~l~~~la~~~~~~~~-------~v~~~~ggtea~~~ai~~~~~~~-~~~---g~~~~~vi~~~~~yh~~~~~~~~~~~ 156 (429)
T 1s0a_A 88 AIELCRKLVAMTPQPLE-------CVFLADSGSVAVEVAMKMALQYW-QAK---GEARQRFLTFRNGYHGDTFGAMSVCD 156 (429)
T ss_dssp HHHHHHHHHHHSCTTCC-------EEEEESSHHHHHHHHHHHHHHHH-HHH---TCCCCEEEEETTCCCCSSHHHHTTSC
T ss_pred HHHHHHHHHHhCCCCCC-------EEEEeCCHHHHHHHHHHHHHHHh-ccc---CCCCCeEEEECCCCCCCchhhhhhcC
Confidence 34566778898886554 78999999999999988776422 100 11244455554 45655444443333
Q ss_pred CC----------CCCeEEEecCCC----CCcccCHHHHHHHHHHHHHCCCccEEEEeecC-CccccccCC----chHHHH
Q 038818 194 ID----------PKNFRAIKTTKS----SSFTLTPESLQAAIDLDIQAGLIPLFLCATVG-TTAITTVDP----LGPLCD 254 (486)
Q Consensus 194 ~g----------~~~v~~v~~d~~----~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~g-tt~~G~idp----l~~I~~ 254 (486)
.. ...+..++++.. ..+.+|+++|+++|++.. ..+.+|+++.. ++++|.+.| +++|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~ 233 (429)
T 1s0a_A 157 PDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHR---HEIAAVIIEPIVQGAGGMRMYHPEWLKRIRK 233 (429)
T ss_dssp TTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHT---TTEEEEEECSSEECTTTCEEBCTHHHHHHHH
T ss_pred CchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCC---CCEEEEEEeecccCCCCcccCCHHHHHHHHH
Confidence 10 114566766421 123689999999997531 12446666666 688998776 999999
Q ss_pred HHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCc--ccccCc
Q 038818 255 IAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNP--EFLRNK 331 (486)
Q Consensus 255 i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~--~y~~~~ 331 (486)
+|++||+++|+|++|.++......+.....++ ..|.++++ |+++++ .++|+++.+++ ... .+.... .+..
T Consensus 234 l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~-~~d~~t~s--K~l~~G~~~iG~~~~~~~-~~~-~l~~~~~~~~~~-- 306 (429)
T 1s0a_A 234 ICDREGILLIADEIATGFGRTGKLFACEHAEI-APDILCLG--KALTGGTMTLSATLTTRE-VAE-TISNGEAGCFMH-- 306 (429)
T ss_dssp HHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTSSSCCEEEEECHH-HHH-HHHTSTTSSCSC--
T ss_pred HHHHcCCEEEEeehhhCCcccchHHHhhhcCC-CCCEEEec--ccccCCCccceEEEeCHH-HHH-HhhcCCCccccc--
Confidence 99999999999999975421111111111122 46777654 988877 78999887653 332 222110 0000
Q ss_pred cCCCCCccCCCCccccCCCCCCchHHHH---HHHHhchHHHHHHHHHHHHHHHHHHHHHhCC---CCeEEecCCCeeEEE
Q 038818 332 ASDSKQVVDYKDWQITLSRRFRALKLWL---VLRSFGVANLRNFLRSHVRMAQLFQELVGGD---NRFEIVAPRNFAVVC 405 (486)
Q Consensus 332 ~~~~~~~~~~~~~~~~~sr~~~~l~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~~~~~~~~~~v~ 405 (486)
..+-....+.+.+ +++.+..+ +..++..++++++.+.|+++ |++..+ ++..+++.
T Consensus 307 ---------------~~t~~~n~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~-~~~g~~~~ 367 (429)
T 1s0a_A 307 ---------------GPTFMGNPLACAAANASLAILESG---DWQQQVADIEVQLREQLAPARDAEMVADV-RVLGAIGV 367 (429)
T ss_dssp ---------------CCTTTTCHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHGGGGGCTTEEEE-EEETTEEE
T ss_pred ---------------CCCCCCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCEEEE-EEeeEEEE
Confidence 0011122333333 33333222 45677778899999998775 555533 22334566
Q ss_pred EEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 406 FRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 406 f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
+.+.... + ...+.+.|.++|++ +.+. + .++|+++ +..++++|++++++.|+++++++.
T Consensus 368 ~~~~~~~------------~--~~~l~~~l~~~Gi~-v~~~---~-~~iRis~-~~~~t~e~i~~~~~~l~~~~~~~~ 425 (429)
T 1s0a_A 368 VETTHPV------------N--MAALQKFFVEQGVW-IRPF---G-KLIYLMP-PYIILPQQLQRLTAAVNRAVQDET 425 (429)
T ss_dssp EEESSCB------------C--HHHHHHHHHHTTEE-CCCB---T-TEEEECC-CTTCCHHHHHHHHHHHHHHTSSGG
T ss_pred EEECCcc------------c--HHHHHHHHHHCCCE-Eecc---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHhhh
Confidence 6654210 1 23566677777864 3332 2 5899997 457788899999999999876554
No 187
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.82 E-value=2e-19 Score=180.76 Aligned_cols=306 Identities=13% Similarity=0.025 Sum_probs=182.9
Q ss_pred ccccChhhHHHHHHHHHHHHHHcC-CCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCc
Q 038818 104 NWMSSPAATELENIVMDWLGEMLK-LPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTH 182 (486)
Q Consensus 104 ~~~~~~~~~~le~~~~~~l~~l~g-~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 182 (486)
.|...+...++++.+.+++. .| .+++ ..++|+|+++++..++. ... +++.|++...+|
T Consensus 70 ~y~~~~g~~~lr~~la~~l~--~g~~~~~-------~v~~~~G~~~al~~~~~-~~~-----------~gd~Vl~~~p~y 128 (400)
T 3asa_A 70 GYGPDFGLPALRQKLSEDFY--RGFVDAK-------EIFISDGAKVDLFRLLS-FFG-----------PNQTVAIQDPSY 128 (400)
T ss_dssp CCCCTTCCHHHHHHHHHTTS--TTSSCGG-------GEEEESCHHHHHHHHHH-HHC-----------SSCEEEEEESCC
T ss_pred CCCCCCCCHHHHHHHHHHHH--cCCCCHH-------HEEEccChHHHHHHHHH-HcC-----------CCCEEEECCCCc
Confidence 34333445566655544432 46 4443 68999999988765332 211 556788888999
Q ss_pred hHHHHHHHHcCCCCCC-eEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHHH
Q 038818 183 SALQKAAQIAGIDPKN-FRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAKR 258 (486)
Q Consensus 183 ~s~~~a~~~~G~g~~~-v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~~ 258 (486)
.++..+++..|. + ++.+|+++++.+..|++ +. ..+.+|+++.++|++|.+-| +++|+++|++
T Consensus 129 ~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~l~---~~--------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~ 194 (400)
T 3asa_A 129 PAYLDIARLTGA---KEIIALPCLQENAFFPEFP---ED--------THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIE 194 (400)
T ss_dssp HHHHHHHHHTTC---SEEEEEECCGGGTTCCCCC---TT--------CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCC---cceEecccchhcCcccChh---hc--------cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHH
Confidence 999999999998 8 99999875333344432 11 12446777789999999977 6678899999
Q ss_pred hCceEEeeccccchhccCccchhhhcCCC---CCCceeeccccccC-CCCcceEEEeeCchH------HHHHhcCCcccc
Q 038818 259 YSIWVHVDAAYAGSACICPEFRHFIDGIE---GADSFSLNAHKWFF-TTLDCCCLWVKNPNA------LIKALSTNPEFL 328 (486)
Q Consensus 259 ~g~~lhvD~a~g~~~~~~~~~~~~~~~~~---~aDsi~~~~hK~l~-~p~~~g~~~~~~~~~------~~~~~~~~~~y~ 328 (486)
+|+++++|++|+.+... +.....+..+. ..+.+..+++|+++ ....+|+++++++.. +...........
T Consensus 195 ~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (400)
T 3asa_A 195 HEILILFDAAYSTFISD-PSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERFLSTT 273 (400)
T ss_dssp TTCEEEEECTTGGGCCC-TTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHH
T ss_pred cCCEEEEEchhhhhhcC-CCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchhhhHHHHHHHHhccC
Confidence 99999999999864321 11111111222 23466889999997 334589888765431 111110000000
Q ss_pred cCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEE-
Q 038818 329 RNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFR- 407 (486)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~- 407 (486)
. . ....+...++...+....++++.++..++++++.+.|++. ++++..+...+.+.+.
T Consensus 274 ~------------------~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 332 (400)
T 3asa_A 274 F------------------N--GASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKALLAT-GFEVFGGEHAPYLWVKP 332 (400)
T ss_dssp C------------------C--CCCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHT-TCEEEECSSSSEEEEEC
T ss_pred c------------------c--CCChHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCceEEEEec
Confidence 0 0 0122333333333321246677788888999999999887 7887754445566666
Q ss_pred eecCCCCCCCCCCccchHHHHHHHHHHHHh-cCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 408 VLPSASGLGDGKANEGANELNRKLLESINA-SGQLYVSHGMVA--GIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
+.... . ..++.+.+.+ .|+.+..+..+. +..++|+++ .+++++++++++.|++++++..
T Consensus 333 ~~~~~----------~----~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~---~~~~e~i~~~l~~l~~~~~~~~ 394 (400)
T 3asa_A 333 TQANI----------S----DRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSS---LGKREDILAACERLQMAPALQS 394 (400)
T ss_dssp CCTTC----------C----TTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEEC---CSCHHHHHHHHHHHHC------
T ss_pred cCCCC----------C----HHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEe---eCCHHHHHHHHHHHHHHHHhhh
Confidence 43210 0 1134445543 477544332221 356899995 4578899999999998876543
No 188
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.82 E-value=5.2e-19 Score=175.88 Aligned_cols=288 Identities=11% Similarity=0.049 Sum_probs=178.0
Q ss_pred HHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCC-eEEEecCCC-chHHHHHHHHc
Q 038818 115 ENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISR-LVVYGSDQT-HSALQKAAQIA 192 (486)
Q Consensus 115 e~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~-H~s~~~a~~~~ 192 (486)
..++++++++++|++ + .+++|+|||+|+..++.+++... .. + .++ ..|+++..+ |.+...+....
T Consensus 72 ~~~l~~~la~~~g~~-~-------~v~~~~g~t~a~~~~~~~~~~~~-~~-~---~~g~~~vl~~~~~y~~~~~~~~~~~ 138 (375)
T 2eh6_A 72 QEELAHKLVKHFWTE-G-------KVFFANSGTESVEAAIKLARKYW-RD-K---GKNKWKFISFENSFHGRTYGSLSAT 138 (375)
T ss_dssp HHHHHHHHHHTSSSC-E-------EEEEESSHHHHHHHHHHHHHHHH-HH-T---TCCCCEEEEEBTCCCCSSHHHHHHC
T ss_pred HHHHHHHHHhhcCCC-C-------eEEEeCchHHHHHHHHHHHHHHh-cc-C---CCCCCEEEEECCCcCCCchhhhhhc
Confidence 345668889999884 3 68999999999998887654321 00 0 133 556666665 54444444443
Q ss_pred CCC-----C----CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHHHHHHh
Q 038818 193 GID-----P----KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCDIAKRY 259 (486)
Q Consensus 193 G~g-----~----~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~i~~~~ 259 (486)
|.. . ..+..+|. +|+++|+++++++ +.+|+++.+++++|.+.| +++|.++|++|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~ 205 (375)
T 2eh6_A 139 GQPKFHKGFEPLVPGFSYAKL-------NDIDSVYKLLDEE------TAGIIIEVIQGEGGVNEASEDFLSKLQEICKEK 205 (375)
T ss_dssp BCGGGTTTTCSCCSSEEEECT-------TCHHHHHTTCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHHHHH
T ss_pred CCccccCCCCCCCCCceeCCC-------chHHHHHHHhcCC------eEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHh
Confidence 321 0 01333332 5899999888642 457888889999999977 99999999999
Q ss_pred CceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCcc
Q 038818 260 SIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVV 339 (486)
Q Consensus 260 g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~ 339 (486)
|+++|+|++|+++...........-+. ..|.++++ |+++++.++|+++++++ .. +.+.. ....
T Consensus 206 ~~~li~De~~~~~~~~~~~~~~~~~~~-~~d~~s~S--K~~~~g~~~G~~~~~~~-~~-~~~~~---~~~~--------- 268 (375)
T 2eh6_A 206 DVLLIIDEVQTGIGRTGEFYAYQHFNL-KPDVIALA--KGLGGGVPIGAILAREE-VA-QSFTP---GSHG--------- 268 (375)
T ss_dssp TCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTSCCEEEEEEHH-HH-TTCCT---TSCC---------
T ss_pred CCEEEEeccccCCCCCCcchhhhhcCC-CCCEEEEc--ccccCCCCeEEEEEcHH-HH-hhhcC---CCCC---------
Confidence 999999999985322111111001111 37888776 88888888999998753 22 22211 0000
Q ss_pred CCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCC
Q 038818 340 DYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGK 419 (486)
Q Consensus 340 ~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~ 419 (486)
.+. ....+...+++..+ +.+.+..++..++++++.+.|++++...+ ++..+++.+.+...
T Consensus 269 ----~~~----~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~g~~~~~~~~~~-------- 328 (375)
T 2eh6_A 269 ----STF----GGNPLACRAGTVVV--DEVEKLLPHVREVGNYFKEKLKELGKGKV--KGRGLMLGLELERE-------- 328 (375)
T ss_dssp ----CSS----TTCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTTSSEE--EEETTEEEEECSSC--------
T ss_pred ----CCC----CCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcCCc--eEEEEEEEEEEcCc--------
Confidence 000 11233333333332 11226778888899999999988754222 23345666665421
Q ss_pred CccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 420 ANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 420 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
..++.+.+.++|+.. .+. +..++|+++. ..+++++++++++.|+++
T Consensus 329 --------~~~~~~~l~~~gi~~-~~~---~~~~iRi~~~-~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 329 --------CKDYVLKALEKGLLI-NCT---AGKVLRFLPP-LIIQKEHIDRAISVLREI 374 (375)
T ss_dssp --------CHHHHHHHHHTTEEC-EEE---TTTEEEECCC-TTCCHHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHHCCCEE-ecC---CCCEEEEECC-CCCCHHHHHHHHHHHHHh
Confidence 124566666778643 322 3467999983 577888999999999875
No 189
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.82 E-value=2.7e-18 Score=172.11 Aligned_cols=300 Identities=12% Similarity=0.038 Sum_probs=179.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEe-cCCCchHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYG-SDQTHSALQKAAQ 190 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~a~~ 190 (486)
.....++.+++++++|. + ..++++|||+|+..|+.+++...... | .++..|++ +...|.+...+..
T Consensus 77 ~~~~~~l~~~la~~~~~--~-------~v~~~~gg~ea~~~al~~~~~~~~~~-g---~~~~~vi~~~~~yhg~~~~~~~ 143 (395)
T 3nx3_A 77 NENIAAAAKNLAKASAL--E-------RVFFTNSGTESIEGAMKTARKYAFNK-G---VKGGQFIAFKHSFHGRTLGALS 143 (395)
T ss_dssp CHHHHHHHHHHHHHHTC--S-------EEEEESSHHHHHHHHHHHHHHHHHHT-T---CTTCEEEEETTCCCCSSHHHHT
T ss_pred CHHHHHHHHHHHHhcCC--C-------eEEEeCCHHHHHHHHHHHHHHHhhcc-C---CCCCEEEEEcCCcCCCCHHHHh
Confidence 45566777889998873 2 68999999999999998887653221 1 13334444 4444444333332
Q ss_pred HcCC--------C-CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHHHHH
Q 038818 191 IAGI--------D-PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCDIAK 257 (486)
Q Consensus 191 ~~G~--------g-~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~i~~ 257 (486)
..+. . ...+..+|.+ |+++|++++++. +.+|+++...+++|.+.| +++|+++|+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~-------d~~~l~~~l~~~------~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~ 210 (395)
T 3nx3_A 144 LTANEKYQKPFKPLISGVKFAKYN-------DISSVEKLVNEK------TCAIILESVQGEGGINPANKDFYKALRKLCD 210 (395)
T ss_dssp TCCCHHHHGGGCSCCSCEEEECTT-------CHHHHHTTCCTT------EEEEEEESEECTTSCEECCHHHHHHHHHHHH
T ss_pred hcCCcccccccCCCCCCcEEeCCC-------CHHHHHHhccCC------eEEEEEeCccCCCCcccCCHHHHHHHHHHHH
Confidence 2220 0 1155556542 799999988632 356777778888899877 999999999
Q ss_pred HhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCC
Q 038818 258 RYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQ 337 (486)
Q Consensus 258 ~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 337 (486)
+||+++|+|++|.++......+.....++ ..|.++++ |.++++.++|+++.+++-.. +.+... ...
T Consensus 211 ~~~~~li~Dev~~~~g~~g~~~~~~~~~~-~~d~~t~s--K~~~~G~~~G~~~~~~~~~~-~~~~~~---~~~------- 276 (395)
T 3nx3_A 211 EKDILLIADEIQCGMGRSGKFFAYEHAQI-LPDIMTSA--KALGCGLSVGAFVINQKVAS-NSLEAG---DHG------- 276 (395)
T ss_dssp HHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGTTTSCCEEEEECHHHHH-HHSCTT---CCS-------
T ss_pred HcCCEEEEEecccCCCcCCcchhHHhcCC-CCCEEEec--ccccCCCceEEEEEchhhhh-hhcCCc---ccC-------
Confidence 99999999999976432111111111122 35666654 88887778898887654212 222110 000
Q ss_pred ccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHh----CCCCeEEecCCCeeEEEEEeecCCC
Q 038818 338 VVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVG----GDNRFEIVAPRNFAVVCFRVLPSAS 413 (486)
Q Consensus 338 ~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~----~~~~~~~~~~~~~~~v~f~~~~~~~ 413 (486)
.+-....+.+.+++..+..-.-++..++..++.+++++.|. ++|.+... ++..+++.+.+....
T Consensus 277 ----------~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~- 344 (395)
T 3nx3_A 277 ----------STYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKR-KGLGFMQGLSLDKSV- 344 (395)
T ss_dssp ----------SCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEECTTS-
T ss_pred ----------CCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EeEEEEEEEEeCCcc-
Confidence 00012334444444333110112344555555555555554 45545433 233456666665321
Q ss_pred CCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 414 GLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 414 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
...++.+.+.++|+++... +..++|+++ +..+++++++++++.|++++++
T Consensus 345 -------------~~~~~~~~l~~~Gi~v~~~----~~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 345 -------------KVAKVIQKCQENALLLISC----GENDLRFLP-PLILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp -------------CHHHHHHHHHHTTEECEEE----TTTEEEECC-CTTCCHHHHHHHHHHHHHHHHT
T ss_pred -------------hHHHHHHHHHHCCCEEecC----CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHh
Confidence 1345677777888754332 356899987 4677888999999999998764
No 190
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.82 E-value=1e-19 Score=185.74 Aligned_cols=160 Identities=16% Similarity=0.152 Sum_probs=123.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHH----
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKA---- 188 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a---- 188 (486)
....++.+++++++|.+ ..+++++|++|+..++. ... +++.|+++...|.+....
T Consensus 133 ~~~~~l~~~la~~~g~~---------~~i~~~sGt~al~~~l~-~~~-----------~Gd~Vi~~~~~y~~~~~~~~~~ 191 (464)
T 1ibj_A 133 PTRDALESLLAKLDKAD---------RAFCFTSGMAALSAVTH-LIK-----------NGEEIVAGDDVYGGSDRLLSQV 191 (464)
T ss_dssp HHHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHT-TSC-----------TTCEEEEESSCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCC---------eEEEECCHHHHHHHHHH-HhC-----------CCCEEEEECCCchhHHHHHHHH
Confidence 35677889999999874 35778888888765443 111 566788888899887654
Q ss_pred HHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeecc
Q 038818 189 AQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAA 268 (486)
Q Consensus 189 ~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a 268 (486)
++..|. +++.+|.+ |+++|+++|++. +.+|+++.++|++|.+.|+++|+++|++||+++++|++
T Consensus 192 ~~~~G~---~v~~v~~~-------d~~~l~~~i~~~------tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea 255 (464)
T 1ibj_A 192 VPRSGV---VVKRVNTT-------KLDEVAAAIGPQ------TKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNS 255 (464)
T ss_dssp SGGGTC---EEEEECTT-------SHHHHHHHCCSS------EEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECT
T ss_pred HHHcCC---EEEEeCCC-------CHHHHHHHhccC------ceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECC
Confidence 456687 88888753 889999988643 45888999999999999999999999999999999999
Q ss_pred ccchhccCccchhhhcCCCCCCceeeccccccCCCCcc--eEEEeeCchH
Q 038818 269 YAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDC--CCLWVKNPNA 316 (486)
Q Consensus 269 ~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~--g~~~~~~~~~ 316 (486)
|+.+....+ .. .++|.++.++||++++|.|+ |+++++++..
T Consensus 256 ~~~g~~~~~-~~------~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l 298 (464)
T 1ibj_A 256 IMSPVLSRP-LE------LGADIVMHSATKFIAGHSDVMAGVLAVKGEKL 298 (464)
T ss_dssp TTCTTTCCG-GG------TTCSEEEEETTTTTTCSSCCCCEEEEECSHHH
T ss_pred CcccccCCh-hh------cCCEEEEECCcccccCCCCCcEEEEEEChHHH
Confidence 976543222 11 16899999999999988765 8888886544
No 191
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.81 E-value=5.1e-19 Score=177.22 Aligned_cols=320 Identities=13% Similarity=0.048 Sum_probs=195.6
Q ss_pred HHHHHHHhhcCC-CccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEE--cCCchHHHHHHHHHHHHHHHHHc
Q 038818 89 FLGEMLSSGFNV-VGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVI--QGTTCEAILCTLAAARDQILNEI 165 (486)
Q Consensus 89 ~~~~~l~~~~n~-~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~--t~ggt~a~~~al~~a~~~~~~~~ 165 (486)
.+.+.+...+.. ....|.......++++.+.+++... +.+.+ ..++ |+||++|+..++.+.+...
T Consensus 48 ~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~~~~~-------~v~~~~~~g~~~a~~~~~~~~~~~~---- 115 (394)
T 2ay1_A 48 AVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGD-GLKSE-------TTATLATVGGTGALRQALELARMAN---- 115 (394)
T ss_dssp HHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGG-GCCGG-------GEEEEEEEHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCC-CCCcc-------cEEEEecCCchhHHHHHHHHHHhcC----
Confidence 344444444321 2334544445677777777776432 22333 6777 9999999988877665421
Q ss_pred cccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 166 GRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 166 ~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
+++.|+++..+|.++...++..|. +++.+|.+..+++.+|+++|++++++. .....+++.+.++|++|.
T Consensus 116 -----~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~~~~~~nptG~ 184 (394)
T 2ay1_A 116 -----PDLRVFVSDPTWPNHVSIMNFMGL---PVQTYRYFDAETRGVDFEGMKADLAAA---KKGDMVLLHGCCHNPTGA 184 (394)
T ss_dssp -----TTCCEEEEESCCHHHHHHHHHHTC---CEEEEECEETTTTEECHHHHHHHHHTC---CTTCEEEEESSSCTTTCC
T ss_pred -----CCCEEEEcCCCChhHHHHHHHcCC---ceEEEecccccCCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCC
Confidence 345577788899999999999999 999999853235789999999998752 112356777999999999
Q ss_pred cCC---chHHHHHHHHhCceEEeeccccchhccC--c--cchhhhcCCCCCC-ceeeccccccCC-CCcceEEEe--eCc
Q 038818 246 VDP---LGPLCDIAKRYSIWVHVDAAYAGSACIC--P--EFRHFIDGIEGAD-SFSLNAHKWFFT-TLDCCCLWV--KNP 314 (486)
Q Consensus 246 idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~--~--~~~~~~~~~~~aD-si~~~~hK~l~~-p~~~g~~~~--~~~ 314 (486)
+-| +++|+++|++||+++++|++|+++.... + .... +... ..+ .+..+++|+++. ...+|++++ .++
T Consensus 185 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~-~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~ 262 (394)
T 2ay1_A 185 NLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRL-IASR-IPEVLIAASCSKNFGIYRERTGCLLALCADA 262 (394)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHH-HHHH-CSSEEEEEECTTTTTCGGGCEEEEEEECSSH
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHH-Hhhc-CCCEEEEEeccCCCcCcCCccceEEEEeCCH
Confidence 865 6688999999999999999997653210 0 0111 1111 223 456688999974 345788887 344
Q ss_pred hHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhc--------hHHHHHHHHHHHHHHHHHHHH
Q 038818 315 NALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFG--------VANLRNFLRSHVRMAQLFQEL 386 (486)
Q Consensus 315 ~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g--------~~g~~~~~~~~~~~a~~l~~~ 386 (486)
+............... +..+ ...+..+++.+.+. .++++++.++..++++++.+.
T Consensus 263 ~~~~~l~~~~~~~~~~--------------~~~~---~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 325 (394)
T 2ay1_A 263 ATRELAQGAMAFLNRQ--------------TYSF---PPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGE 325 (394)
T ss_dssp HHHHHHHHHHHHHHHT--------------TTSS---CCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh--------------hcCC---CChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3221111000000000 0000 12233333333331 246777788888889999999
Q ss_pred HhCCC---CeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCC
Q 038818 387 VGGDN---RFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLT 463 (486)
Q Consensus 387 L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~t 463 (486)
|+++. ++++.. +..+.+.+. .-+ . ..+.+.+.+.|+. +.+ .+|+++. .+
T Consensus 326 L~~~~~~~~~~~~~-~~~g~~~~~-~~~-------------~---~~~~~~l~~~gi~-v~~-------~~Ris~~--~~ 377 (394)
T 2ay1_A 326 LRDLSGSDRFGFVA-EHRGMFSRL-GAT-------------P---EQVKRIKEEFGIY-MVG-------DSRINIA--GL 377 (394)
T ss_dssp HHHHHTSSTTTHHH-HCCSSEEEC-CCC-------------H---HHHHHHHHHHCEE-CCT-------TCEEEGG--GC
T ss_pred HHhcCCCCCeeEEc-CCceEEEee-CCC-------------H---HHHHHHHHhCCEE-ecC-------CCeEEee--cC
Confidence 87753 355443 333333331 111 1 2344455566864 333 2699985 46
Q ss_pred cHHHHHHHHHHHHHH
Q 038818 464 EDRHVIAAWKVVQEK 478 (486)
Q Consensus 464 t~~did~~i~~l~~~ 478 (486)
+++++++++++|+++
T Consensus 378 ~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 378 NDNTIPILARAIIEV 392 (394)
T ss_dssp CTTTHHHHHHHHHHH
T ss_pred CHhhHHHHHHHHHHc
Confidence 778999999999876
No 192
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.81 E-value=6e-18 Score=172.52 Aligned_cols=355 Identities=11% Similarity=0.051 Sum_probs=211.1
Q ss_pred CHHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHHHHHHhhc---CCCccccccChhhHHHHHHHHHHHHHHcCC
Q 038818 52 PIETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGEMLSSGF---NVVGFNWMSSPAATELENIVMDWLGEMLKL 128 (486)
Q Consensus 52 ~~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~---n~~~~~~~~~~~~~~le~~~~~~l~~l~g~ 128 (486)
....+.+.++..-.+...+.....|+++-..++..++ +.+.+.... ......|...++..++.+.+.+++ +|.
T Consensus 35 ~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a-v~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l---~g~ 110 (448)
T 3meb_A 35 AILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPA-VKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLM---FGK 110 (448)
T ss_dssp TTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHH-HHHHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHHH---HCT
T ss_pred hHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHH-HHHHHHHHhhcccCCCCCCCCCcchHHHHHHHHHHh---cCC
Confidence 4566666666554444344444455555443333344 333332222 122334554455566666666665 366
Q ss_pred C-----CCCccCCCcceEE--cCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH----HcCCCCC
Q 038818 129 P-----KSFLFSGTGGGVI--QGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ----IAGIDPK 197 (486)
Q Consensus 129 ~-----~~~~~~~~~~~~~--t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~----~~G~g~~ 197 (486)
+ ++ ..++ |+|||+|+..++...... .+++.|+++..+|.++...++ ..|+
T Consensus 111 ~~~~~~~~-------~i~~~~t~ggt~al~l~~~~~~~~---------~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~--- 171 (448)
T 3meb_A 111 DSKAAQEG-------RIASCQSLSGTGSLHIGFEFLHLW---------MPKAEFYMPSTTWPNHYGIYDKVFNKLKV--- 171 (448)
T ss_dssp TCHHHHTT-------CEEEEEESHHHHHHHHHHHHHHHH---------CTTCCEEEESSCCTHHHHHHHHHHCTTTS---
T ss_pred CccccCcC-------cEEEEECCcHHHHHHHHHHHHHHh---------CCCCEEEECCCCCHhHHHHHHhhHHhCCC---
Confidence 5 23 6788 999999997644322211 056678889999999999999 8899
Q ss_pred CeEEEec-CCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHHHhCceEEeeccccchh
Q 038818 198 NFRAIKT-TKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAKRYSIWVHVDAAYAGSA 273 (486)
Q Consensus 198 ~v~~v~~-d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~~~g~~lhvD~a~g~~~ 273 (486)
+++.+|+ ++++++.+|+++|++++++. .....+++.+.++|+||.+-+ +++|+++|++||+++++|++|.++.
T Consensus 172 ~v~~~~~~~~~~~~~~d~e~l~~~l~~~---~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~ 248 (448)
T 3meb_A 172 PYKEYTYLRKDGELEIDFSNTKKDIQSA---PEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFA 248 (448)
T ss_dssp CCEEECCBCTTSCSSBCHHHHHHHHHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTS
T ss_pred eEEEEeccccccCCCcCHHHHHHHHHhC---CCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEeccccccc
Confidence 9999998 54215799999999999752 112457788899999999866 5669999999999999999997754
Q ss_pred ccCc-----cchhhhcCCCCCC-ceeeccccccCCC-CcceEE--Ee--------eCchH---HHHHhcCCcccccCccC
Q 038818 274 CICP-----EFRHFIDGIEGAD-SFSLNAHKWFFTT-LDCCCL--WV--------KNPNA---LIKALSTNPEFLRNKAS 333 (486)
Q Consensus 274 ~~~~-----~~~~~~~~~~~aD-si~~~~hK~l~~p-~~~g~~--~~--------~~~~~---~~~~~~~~~~y~~~~~~ 333 (486)
.... ..+.... . ..+ .++.++||.++.| ..+|++ +. .++.. +...+.. .....
T Consensus 249 ~~~~~~~~~~~~~~~~-~-~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~---~~~~~-- 321 (448)
T 3meb_A 249 TGSFEADAFAVRMFVD-A-GVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTL---QIRKT-- 321 (448)
T ss_dssp SSCHHHHTHHHHHHHH-T-TCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHH---HHHTT--
T ss_pred CCCcccCchhHHHHhh-c-CCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHH---HHhcc--
Confidence 3220 0111111 1 233 5578899999844 447777 55 34311 1111110 00000
Q ss_pred CCCCccCCCCccccCCCCCCchHHHHHHHHhch--------HHHHHHHHHHHHHHHHHHHHHhCC--CC------eEEec
Q 038818 334 DSKQVVDYKDWQITLSRRFRALKLWLVLRSFGV--------ANLRNFLRSHVRMAQLFQELVGGD--NR------FEIVA 397 (486)
Q Consensus 334 ~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~--------~g~~~~~~~~~~~a~~l~~~L~~~--~~------~~~~~ 397 (486)
.-....+..+++...+.. +.++++.++..++++++.+.|+++ ++ ++..
T Consensus 322 ---------------~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~- 385 (448)
T 3meb_A 322 ---------------WSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHI- 385 (448)
T ss_dssp ---------------TSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHH-
T ss_pred ---------------cCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCccccccee-
Confidence 001122333444333322 346777788889999999999876 44 4333
Q ss_pred CCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHH-HhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 398 PRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESI-NASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 398 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
.+..++++|.-.+ .+ +...+ .+.|+. +.++. .|+++.. . ++++|+++++.|.
T Consensus 386 ~~~~g~~~~~~~~--------------~~----~~~~ll~~~gV~-v~~G~------gRis~a~-~-~~~~i~~~~~~l~ 438 (448)
T 3meb_A 386 LTAIGMFTFTGLT--------------PE----HVDYLKEKWSIY-LVKAG------GRMSMCG-L-TESNCDYVAEAIH 438 (448)
T ss_dssp HHCCSSEEECCCC--------------HH----HHHHHHHHHCEE-ECSGG------GEEEGGG-C-CTTTHHHHHHHHH
T ss_pred CCCceEEEecCCC--------------HH----HHHHHHHhCCEE-EeCCC------cEEEEec-C-CHHHHHHHHHHHH
Confidence 2334444442111 22 23333 345764 44421 2999853 2 4447999999999
Q ss_pred HHHHHH
Q 038818 477 EKLDGI 482 (486)
Q Consensus 477 ~~~~~l 482 (486)
++++++
T Consensus 439 ~~l~~~ 444 (448)
T 3meb_A 439 DAVTKL 444 (448)
T ss_dssp HHHHHS
T ss_pred HHHHhc
Confidence 988753
No 193
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.81 E-value=5.4e-18 Score=171.34 Aligned_cols=300 Identities=11% Similarity=-0.001 Sum_probs=184.4
Q ss_pred HHHHHHHHHHHHHcCCC-CCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 113 ELENIVMDWLGEMLKLP-KSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~-~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
....++.+.+++++|.+ .+ .+++|+||++|+..++.+++... ++.+|+.....|.+...++..
T Consensus 86 ~~~~~l~~~la~~~~~~~~~-------~v~~~~gg~ea~~~ai~~~~~~~---------~~~vi~~~p~yh~~~~~~~~~ 149 (419)
T 2eo5_A 86 IPQLELAKKLVTYSPGNFQK-------KVFFSNSGTEAIEASIKVVKNTG---------RKYIIAFLGGFHGRTFGSISL 149 (419)
T ss_dssp HHHHHHHHHHHHHSSCSSCE-------EEEEESSHHHHHHHHHHHHHTTS---------CCEEEEETTCCCCSSHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCcCC-------EEEEeCchHHHHHHHHHHHHHhh---------CCcEEEECCCcCCCCHhhHhh
Confidence 34456678899999986 43 68999999999999988876420 233444444566555555544
Q ss_pred cCC--------C--CCCeEEEecCCCCCcc----------------cCHHHHH-HHHHHHHHCCCccEEEEeecCCcccc
Q 038818 192 AGI--------D--PKNFRAIKTTKSSSFT----------------LTPESLQ-AAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 192 ~G~--------g--~~~v~~v~~d~~~~~~----------------~d~~~L~-~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
.|. + ...++.+|.+. +++ +|+++|+ ++|++.. ....+.+|+++..++++|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~-~~~~~~~vi~~p~~~~tG 226 (419)
T 2eo5_A 150 TASKAVQRSIVGPFMPGVIHVPYPN--PYRNPWHINGYENPSELVNRVIEFIEDYIFVNLV-PPEEVAGIFFEPIQGEGG 226 (419)
T ss_dssp CCSCGGGGCSSCCCCTTEEEECCCC--SSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTC-CGGGEEEEEECSSBTTTT
T ss_pred cCCccccccccCCCCCCCEEECCCc--cccccccccccccchhhHHHHHHHHHHHHHhhcc-CCCCEEEEEEeCccCCCC
Confidence 331 1 12578888753 232 4788999 8887420 001234566665556789
Q ss_pred ccCC----chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHH
Q 038818 245 TVDP----LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIK 319 (486)
Q Consensus 245 ~idp----l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~ 319 (486)
.+-| +++|+++|++||+++|+|++|.++......+.....++ ..|.++ +.|.++++ .++|+++.+++ ..
T Consensus 227 ~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~-~~d~~t--~sK~~~~G~~riG~~~~~~~-~~-- 300 (419)
T 2eo5_A 227 YVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNT-VPDVIT--LAKALGGGIMPIGATIFRKD-LD-- 300 (419)
T ss_dssp SBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEE--ECGGGGTTTSCCEEEEEEGG-GC--
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCC-CCCEEE--ecccccCCccceEEEEEchH-hh--
Confidence 8766 99999999999999999999976432111111011122 456665 45988877 78899988754 21
Q ss_pred HhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC
Q 038818 320 ALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR 399 (486)
Q Consensus 320 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 399 (486)
.+ .... . .+-....+...+++..+. .+++..++..+++++|.+.|+++ +..+ ++
T Consensus 301 ~~---~~~~-~-----------------~t~~~n~~~~~aa~aal~--~~~~~~~~~~~~~~~l~~~L~~~--~~~~-~~ 354 (419)
T 2eo5_A 301 FK---PGMH-S-----------------NTFGGNALACAIGSKVID--IVKDLLPHVNEIGKIFAEELQGL--ADDV-RG 354 (419)
T ss_dssp CC---------------------------CCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTS--SSEE-EE
T ss_pred cC---Cccc-C-----------------CCCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHh--hhhe-Ee
Confidence 11 0000 0 000123344444444331 12237788888999999999876 2222 23
Q ss_pred CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 400 NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 400 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
..+++.+.+.+. ..... +.+.|.++|+++... +..++|+++ +..+++++++++++.|++++
T Consensus 355 ~g~~~~i~~~~~-------------~~~~~-~~~~l~~~Gv~v~~~----~~~~lRis~-~~~~t~e~i~~~l~~l~~~l 415 (419)
T 2eo5_A 355 IGLAWGLEYNEK-------------KVRDR-IIGESFKRGLLLLPA----GRSAIRVIP-PLVISEEEAKQGLDILKKVI 415 (419)
T ss_dssp ETTEEEEECSCH-------------HHHHH-HHHHHHHTTEECEEE----TTTEEEECC-CTTCCHHHHHHHHHHHHHHH
T ss_pred eeEEEEEEEecC-------------ccHHH-HHHHHHHCCCEEecC----CCCEEEEEC-CCCCCHHHHHHHHHHHHHHH
Confidence 345666665321 12244 777777888754332 245799987 45778889999999999987
Q ss_pred HHH
Q 038818 480 DGI 482 (486)
Q Consensus 480 ~~l 482 (486)
+++
T Consensus 416 ~~~ 418 (419)
T 2eo5_A 416 KVV 418 (419)
T ss_dssp HHC
T ss_pred Hhc
Confidence 654
No 194
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.81 E-value=1.5e-18 Score=173.90 Aligned_cols=229 Identities=16% Similarity=0.113 Sum_probs=160.6
Q ss_pred HHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHH-----
Q 038818 115 ENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAA----- 189 (486)
Q Consensus 115 e~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~----- 189 (486)
..++.+.++++.|.+ ..+++++|++|+..+ ..... +++.|+++...|.+....+
T Consensus 69 ~~~l~~~la~l~g~~---------~~~~~~sG~~Ai~~~-~~l~~-----------~gd~Vi~~~~~y~~~~~~~~~~~~ 127 (400)
T 3nmy_A 69 RFAYERCVAALEGGT---------RAFAFASGMAATSTV-MELLD-----------AGSHVVAMDDLYGGTFRLFERVRR 127 (400)
T ss_dssp HHHHHHHHHHHHTCS---------EEEEESSHHHHHHHH-HTTSC-----------TTCEEEEESSCCHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHhCCC---------CEEEecCHHHHHHHH-HHHcC-----------CCCEEEEeCCCchHHHHHHHHhhH
Confidence 334445678888864 357788888887653 22111 5667888888888655543
Q ss_pred HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccc
Q 038818 190 QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 190 ~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
...|+ +++.++.+ |+++|+++|++. +.+|+++.++|++|.+.|+++|+++|++||+++++|++|
T Consensus 128 ~~~g~---~~~~v~~~-------d~~~l~~~i~~~------~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~ 191 (400)
T 3nmy_A 128 RTAGL---DFSFVDLT-------DPAAFKAAIRAD------TKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTF 191 (400)
T ss_dssp HHHCC---EEEEECTT-------SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTT
T ss_pred hhcCe---EEEEECCC-------CHHHHHHHhccC------CCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCC
Confidence 33588 88888753 899999988653 457888999999999999999999999999999999999
Q ss_pred cchhccCccchhhhcCCCCCCceeeccccccCCCC--cce-EEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccc
Q 038818 270 AGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL--DCC-CLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQI 346 (486)
Q Consensus 270 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~--~~g-~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 346 (486)
+.+....+. . .++|.++.+++|++++|. -+| ++++++++....... ...+
T Consensus 192 ~~~~~~~~~-~------~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~-~~~~------------------- 244 (400)
T 3nmy_A 192 ASPMLQRPL-S------LGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAF-LQNS------------------- 244 (400)
T ss_dssp THHHHCCGG-G------GTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHH-HHHH-------------------
T ss_pred cccccCChh-h------cCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHH-HHHh-------------------
Confidence 865543321 1 169999999999999773 345 456666554332111 0000
Q ss_pred cCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCC-----------------CeeEEEEEee
Q 038818 347 TLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPR-----------------NFAVVCFRVL 409 (486)
Q Consensus 347 ~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------------~~~~v~f~~~ 409 (486)
.+.....+..|..++. .+.+..++++..++++++.+.|++.|.++.+..| ...+++|.+.
T Consensus 245 -~g~~~~~~~a~~~l~~--l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~ 321 (400)
T 3nmy_A 245 -IGGVQGPFDSFLALRG--LKTLPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLK 321 (400)
T ss_dssp -HCCBCCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEET
T ss_pred -cCCCCCHHHHHHHHHh--HhHHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeC
Confidence 1112345666777664 4667788899999999999999999988755332 2458888885
Q ss_pred c
Q 038818 410 P 410 (486)
Q Consensus 410 ~ 410 (486)
+
T Consensus 322 ~ 322 (400)
T 3nmy_A 322 G 322 (400)
T ss_dssp T
T ss_pred C
Confidence 4
No 195
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.80 E-value=1.4e-17 Score=168.93 Aligned_cols=303 Identities=9% Similarity=-0.015 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecC-CCchHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSD-QTHSALQKAAQ 190 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~-~~H~s~~~a~~ 190 (486)
.....++.+.+++++|. + ..++++|||+||..++.+++.......|.. .++..|++.+ ..|.+...++.
T Consensus 106 ~~~~~~l~~~la~~~g~--~-------~v~~~~sGseA~~~al~~a~~~~~~~~g~~-~gr~~vi~~~~~yhg~~~~~~~ 175 (433)
T 1z7d_A 106 SVPLGICERYLTNLLGY--D-------KVLMMNTGAEANETAYKLCRKWGYEVKKIP-ENMAKIVVCKNNFSGRTLGCIS 175 (433)
T ss_dssp EHHHHHHHHHHHHHHTC--S-------EEEEESSHHHHHHHHHHHHHHHHHHTSCCC-TTCCEEEEETTC----------
T ss_pred CHHHHHHHHHHHhhcCC--C-------eEEEeCCHHHHHHHHHHHHHHHhhhccCCC-CCCCeEEEEeCCcCCcchhhhc
Confidence 34455666778888774 2 589999999999999998875321111100 0224444444 45555555555
Q ss_pred HcCC-------C--CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC----CchHHHHHHH
Q 038818 191 IAGI-------D--PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD----PLGPLCDIAK 257 (486)
Q Consensus 191 ~~G~-------g--~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id----pl~~I~~i~~ 257 (486)
..|. + ...++.+|. .|+++|+++|+. ..+.+|+++...+++|.+. ++++|.++|+
T Consensus 176 ~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le~~l~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~ 243 (433)
T 1z7d_A 176 ASTTKKCTSNFGPFAPQFSKVPY-------DDLEALEEELKD-----PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICK 243 (433)
T ss_dssp ----------------CEEEECT-------TCHHHHHHHHTS-----TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHH
T ss_pred ccCCccccccCCCCCCCeEEeCC-------CCHHHHHHHhCC-----CCEEEEEEECCCCCCCccCCCHHHHHHHHHHHH
Confidence 5441 0 014555553 289999999851 1245677776666788764 7999999999
Q ss_pred HhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCCCC
Q 038818 258 RYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASDSK 336 (486)
Q Consensus 258 ~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 336 (486)
+||++|++|++|.++......+.....++ ..|.++ ..|++++. ..+|+++.+++ .. +.+. + .. .
T Consensus 244 ~~g~llI~DEv~~g~g~~g~~~~~~~~~~-~~di~t--~sK~l~~G~~~~G~v~~~~~-~~-~~l~--~-~~-~------ 308 (433)
T 1z7d_A 244 KYNVLFVADEVQTGLGRTGKLLCVHHYNV-KPDVIL--LGKALSGGHYPISAVLANDD-IM-LVIK--P-GE-H------ 308 (433)
T ss_dssp HTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEE--ECGGGGTTSSCCEEEEECHH-HH-TTCC--T-TC-C------
T ss_pred HcCCEEEEecCccCCCcCCcchhhHhcCC-CCCEEE--ECccccCCCCCeEEEEECHH-HH-hhhc--c-cc-c------
Confidence 99999999999976322111111011122 467764 56999866 56898888653 22 2221 1 00 0
Q ss_pred CccCCCCccccCCCCCCchHHH---HHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC----CCeEEecCCCeeEEEEEee
Q 038818 337 QVVDYKDWQITLSRRFRALKLW---LVLRSFGVANLRNFLRSHVRMAQLFQELVGGD----NRFEIVAPRNFAVVCFRVL 409 (486)
Q Consensus 337 ~~~~~~~~~~~~sr~~~~l~~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~~~ 409 (486)
..++ ....+.+. .+++.+.. +++.++..++++++.+.|+++ |.+..+ ++...++.+.+.
T Consensus 309 ------~~t~----~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~-~~~g~~~~i~~~ 374 (433)
T 1z7d_A 309 ------GSTY----GGNPLAASICVEALNVLIN---EKLCENAEKLGGPFLENLKRELKDSKIVRDV-RGKGLLCAIEFK 374 (433)
T ss_dssp ------CCTT----TTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEE-EEETTEEEEEEC
T ss_pred ------cccC----CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EeeeeEEEEEEc
Confidence 0011 12233333 33433322 245677777888888888653 333222 233456667664
Q ss_pred cCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 410 PSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
... . ...++.+.|.++|++ +.+. +..++|+++ +...+++||+++++.|+++++++.
T Consensus 375 ~~~---------~----~~~~~~~~l~~~Gv~-v~~~---~~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~~~ 430 (433)
T 1z7d_A 375 NEL---------V----NVLDICLKLKENGLI-TRDV---HDKTIRLTP-PLCITKEQLDECTEIIVKTVKFFD 430 (433)
T ss_dssp TTT---------C----CHHHHHHHHHHTTEE-CCEE---TTTEEEECC-CTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred cCh---------h----HHHHHHHHHHHCCeE-EecC---CCCEEEEEC-CcCCCHHHHHHHHHHHHHHHHHHH
Confidence 320 0 134567777778874 3332 346899987 456788999999999999987764
No 196
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.80 E-value=1.4e-17 Score=168.86 Aligned_cols=331 Identities=11% Similarity=0.041 Sum_probs=178.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHH-HHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQK-AAQ 190 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~-a~~ 190 (486)
.....++.+++++.++.+.+ ..++|+||++|+..++.+++...... |.. ++..|++....++.... +..
T Consensus 71 ~~~~~~l~~~la~~~~~~~~-------~v~~~~gg~ea~~~al~~~~~~~~~~-g~~--~~~~vi~~~~~yhg~~~~~~~ 140 (430)
T 3i4j_A 71 SDVLEEYAGRLARFVGLPTF-------RFWAVSGGSEATESAVKLARQYHVER-GEP--GRFKVITRVPSYHGASLGSLA 140 (430)
T ss_dssp EHHHHHHHHHHHHHTTCTTC-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCT--TCCEEEEETTC----------
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCcHHHHHHHHHHHHHHHHHhc-CCC--CCcEEEEEeCCcCCCCccccc
Confidence 45666778899999987654 68999999999999999887653221 111 34445555444443322 222
Q ss_pred HcCCCC---------C--CeEEEecCCC-CCcccCHHHHHHHHHHHHHCCCccEEEEeecCCc-cccccCC----chHHH
Q 038818 191 IAGIDP---------K--NFRAIKTTKS-SSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTT-AITTVDP----LGPLC 253 (486)
Q Consensus 191 ~~G~g~---------~--~v~~v~~d~~-~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt-~~G~idp----l~~I~ 253 (486)
..+... . .+..+|.+.. ..+..|+++|+++|++.. ...+.+|+++..++ ++|.+.+ +++|+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~--~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~ 218 (430)
T 3i4j_A 141 ASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREG--PETVAAFMAEPVVGASDAALAPAPGYYERVR 218 (430)
T ss_dssp ---------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHC--GGGEEEEEECSSCCGGGTTCCCCTTHHHHHH
T ss_pred ccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcC--CCCEEEEEEcCcccCcCCcccCCHHHHHHHH
Confidence 222100 0 3344554321 013467899999997531 01245677777777 8888777 99999
Q ss_pred HHHHHhCceEEeeccccchhccCccchhhhc-CCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCC-cccccC
Q 038818 254 DIAKRYSIWVHVDAAYAGSACICPEFRHFID-GIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTN-PEFLRN 330 (486)
Q Consensus 254 ~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~-~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~-~~y~~~ 330 (486)
++|++||+++|+|++|.++......+..... ++ ..|.+++ .|.+++. ...|.++.++ +... .+... ..+...
T Consensus 219 ~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~-~~di~t~--sK~l~~G~~r~G~~~~~~-~i~~-~~~~~~~~~~~~ 293 (430)
T 3i4j_A 219 DICDEAGIIFIADEVMSGMGRCGSPLALSRWSGV-TPDIAVL--GKGLAAGYAPLAGLLAAP-QVYE-TVMGGSGAFMHG 293 (430)
T ss_dssp HHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTC-CCSEEEE--CGGGTTTSSCCEEEEECH-HHHH-HHHHTTCBCCCC
T ss_pred HHHHHcCCEEEEechhhCCCcccchhhhhhhcCC-CCcEEEE--cccccCCccccEEEEECH-HHHH-HHhccCCccccc
Confidence 9999999999999999765321111111111 22 3566665 4998865 5678887744 3332 22211 111110
Q ss_pred ccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHh----CCCCeEEecCCCeeEEEE
Q 038818 331 KASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVG----GDNRFEIVAPRNFAVVCF 406 (486)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~----~~~~~~~~~~~~~~~v~f 406 (486)
.+-....+.+.+++..+..-.-+++.++..++.+++++.|. ++|.+..+ ++..+++.+
T Consensus 294 -----------------~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~ 355 (430)
T 3i4j_A 294 -----------------FTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQV-RGTGLLLGV 355 (430)
T ss_dssp -----------------CTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEE
T ss_pred -----------------CCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEE
Confidence 01112334444444433210112344455555555555543 45666554 233455666
Q ss_pred EeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeee-eE--CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 407 RVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHG-MV--AGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~--~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
.+...... +.........++.+.+.++|+++.... .. .+..++|+++ ....++++++++++.|+++++++.
T Consensus 356 ~~~~~~~~-----~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~~~ 429 (430)
T 3i4j_A 356 VLGDLATG-----QAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGP-PLSITAAEVDGLLALLAGALEDVL 429 (430)
T ss_dssp EEC-----------------CHHHHHHHHHHTTEECC-----------CEEEECC-CTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred Eecccccc-----CCCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHhh
Confidence 55421100 000000113567778888897543321 11 1356899987 356788899999999999988764
No 197
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.80 E-value=6.3e-18 Score=165.51 Aligned_cols=270 Identities=12% Similarity=0.035 Sum_probs=181.0
Q ss_pred HHHHHHHHHcC---CCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcC
Q 038818 117 IVMDWLGEMLK---LPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAG 193 (486)
Q Consensus 117 ~~~~~l~~l~g---~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G 193 (486)
++++.+++++| .+.+ ..++|+||++++..++.+. ++.|+++ .+|.++...++..|
T Consensus 60 ~lr~~la~~~~~~~~~~~-------~v~~~~G~~~al~~~~~~~--------------gd~Vl~~-p~y~~~~~~~~~~g 117 (335)
T 1uu1_A 60 ELIEKILSYLDTDFLSKN-------NVSVGNGADEIIYVMMLMF--------------DRSVFFP-PTYSCYRIFAKAVG 117 (335)
T ss_dssp HHHHHHHHHHTCSSCCGG-------GEEEESSHHHHHHHHHHHS--------------SEEEECS-SSCHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCCHH-------HEEEcCChHHHHHHHHHHh--------------CCcEEEC-CCcHHHHHHHHHcC
Confidence 34455666666 5544 7899999999987766553 2457788 99999999999999
Q ss_pred CCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchh
Q 038818 194 IDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSA 273 (486)
Q Consensus 194 ~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~ 273 (486)
. +++.+|+++ ++.+|+++| + .+.+|+++.++|++|.+-|.+++.++++..| ++++|++|+.+.
T Consensus 118 ~---~~~~v~~~~--~~~~d~~~l-----~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~ 180 (335)
T 1uu1_A 118 A---KFLEVPLTK--DLRIPEVNV-----G------EGDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFH 180 (335)
T ss_dssp C---EEEECCCCT--TSCCCCCCC-----C------TTEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHH
T ss_pred C---eEEEeccCC--CCCCCHHHc-----C------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhc
Confidence 9 999999874 468888877 1 2457777889999999999999999999999 999999997643
Q ss_pred ccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCC
Q 038818 274 CICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRF 352 (486)
Q Consensus 274 ~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~ 352 (486)
. . .....+. ....+.+..+++|+++.| ..+|+++++ ++...........| ..
T Consensus 181 ~-~-~~~~~~~-~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~l~~~~~~~-----------------------~~ 233 (335)
T 1uu1_A 181 G-E-SYVDFLK-KYENLAVIRTFSKAFSLAAQRVGYVVAS-EKFIDAYNRVRLPF-----------------------NV 233 (335)
T ss_dssp C-C-CCGGGGG-TCSSEEEEEESTTTTTCGGGCCEEEEEC-HHHHHHHHHHSCTT-----------------------CS
T ss_pred c-h-hHHHHhh-hCCCEEEEecchhhcCCcccCeEEEEeC-HHHHHHHHHhcCCC-----------------------Cc
Confidence 2 1 1111111 124567788999999743 357888884 43332211111000 11
Q ss_pred CchHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHH
Q 038818 353 RALKLWLVLRSFG-VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKL 431 (486)
Q Consensus 353 ~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l 431 (486)
..+..+++.+.+. .++++++.++..++++++.+.|+++ ++++. ++..+.+.+.+.. ....++
T Consensus 234 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~---------------~~~~~~ 296 (335)
T 1uu1_A 234 SYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM-GYRIT-DSRGNFVFVFMEK---------------EEKERL 296 (335)
T ss_dssp CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCCSSEEEEECCT---------------HHHHHH
T ss_pred CHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CcEEc-CCCCeEEEEECCC---------------CCHHHH
Confidence 2333333333332 2467788888899999999999887 67653 4445555555431 113456
Q ss_pred HHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 432 LESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 432 ~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
.+.|.++|+.+ .+ +.+++|+++. +++|++++++.|+++
T Consensus 297 ~~~l~~~gi~v-~~----~~~~iRis~~----~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 297 LEHLRTKNVAV-RS----FREGVRITIG----KREENDMILRELEVF 334 (335)
T ss_dssp HHHHHHHTEEE-EE----ETTEEEEECC----CHHHHHHHHHHHHCC
T ss_pred HHHHHHCCEEE-EE----CCCeEEEEeC----CHHHHHHHHHHHHhh
Confidence 77777778754 33 2357999984 246899999988753
No 198
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.80 E-value=4.8e-19 Score=177.48 Aligned_cols=318 Identities=12% Similarity=0.059 Sum_probs=196.8
Q ss_pred HHHHHHhhcCC-CccccccChhhHHHHHHHHHHHHHHcCC--CCCCccCCCcceEE--cCCchHHHHHHHHHHHHHHHHH
Q 038818 90 LGEMLSSGFNV-VGFNWMSSPAATELENIVMDWLGEMLKL--PKSFLFSGTGGGVI--QGTTCEAILCTLAAARDQILNE 164 (486)
Q Consensus 90 ~~~~l~~~~n~-~~~~~~~~~~~~~le~~~~~~l~~l~g~--~~~~~~~~~~~~~~--t~ggt~a~~~al~~a~~~~~~~ 164 (486)
+.+.+...+.. ....|...+...++++.+.+++.+..+. +++ ..++ |+||++|+..++.+.+...
T Consensus 49 v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~-------~v~~~~~~g~~~a~~~~~~~~~~~~--- 118 (396)
T 2q7w_A 49 VKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDK-------RARTAQTPGGTGALRVAADFLAKNT--- 118 (396)
T ss_dssp HHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTT-------CEEEEEESHHHHHHHHHHHHHHHHS---
T ss_pred HHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccccc-------cEEEEecccchhhHHHHHHHHHHhC---
Confidence 44444444321 2334544555677888777777544332 222 5676 9999999988876654320
Q ss_pred ccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 165 IGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 165 ~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
+++.|++...+|.++...++..|. +++.+|.++.+++.+|+++|++++++. .....+++.+.++|++|
T Consensus 119 ------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~~~~p~nptG 186 (396)
T 2q7w_A 119 ------SVKRVWVSNPSWPNHKSVFNSAGL---EVREYAYYDAENHTLDFDALINSLNEA---QAGDVVLFHGCCHNPTG 186 (396)
T ss_dssp ------CCCEEEEEESCCTHHHHHHHHTTC---EEEEEECEETTTTEECHHHHHHHHTTC---CTTCEEEEECSSCTTTC
T ss_pred ------CCCEEEEcCCCchhHHHHHHHcCC---ceEEEecccCCCCCcCHHHHHHHHHhC---CCCCEEEEeCCCCCCCC
Confidence 566788888999999999999999 999999853235789999999998642 11235677899999999
Q ss_pred ccCC---chHHHHHHHHhCceEEeeccccchhccC--c--cchhhhcCCCCCCceeeccccccCC-CCcceEEEe--eCc
Q 038818 245 TVDP---LGPLCDIAKRYSIWVHVDAAYAGSACIC--P--EFRHFIDGIEGADSFSLNAHKWFFT-TLDCCCLWV--KNP 314 (486)
Q Consensus 245 ~idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~--~--~~~~~~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~--~~~ 314 (486)
.+-| +++|+++|++||+++++|++|+++.... + .... +.....-+.+..+++|+++. ...+|++++ .++
T Consensus 187 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~ 265 (396)
T 2q7w_A 187 IDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRA-FAAMHKELIVASSYSXNFGLYNERVGACTLVAADS 265 (396)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHH-HHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSH
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHH-HHhcCCcEEEEEeccccccccccccceEEEEcCCH
Confidence 9855 6689999999999999999997643210 0 1111 11111234667889999974 344788886 344
Q ss_pred hH---HHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhc--------hHHHHHHHHHHHHHHHHH
Q 038818 315 NA---LIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFG--------VANLRNFLRSHVRMAQLF 383 (486)
Q Consensus 315 ~~---~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g--------~~g~~~~~~~~~~~a~~l 383 (486)
+. +...+.. .... +.. ....+..+++...+. .+.++++.++..++++++
T Consensus 266 ~~~~~~~~~~~~---~~~~--------------~~~---~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l 325 (396)
T 2q7w_A 266 ETVDRAFSQMKA---AIRA--------------NYS---NPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLF 325 (396)
T ss_dssp HHHHHHHHHHHH---HHHT--------------TTS---SCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHH
T ss_pred HHHHHHHHHHHH---HHhh--------------ccC---CCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 1111110 0000 000 012333444444432 245667777888899999
Q ss_pred HHHHhCCC---CeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecC
Q 038818 384 QELVGGDN---RFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGA 460 (486)
Q Consensus 384 ~~~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~ 460 (486)
.+.|+++. ++++. ++..+++.|.-.+ . ..+.+.+.+.|+. +.+ .+|+++..
T Consensus 326 ~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~--------------~---~~~~~~l~~~gv~-v~~-------~~Ris~~~ 379 (396)
T 2q7w_A 326 VNTLQEKGANRDFSFI-IKQNGMFSFSGLT--------------K---EQVLRLREEFGVY-AVA-------SGRVNVAG 379 (396)
T ss_dssp HHHHHHTTCCSCCTHH-HHCCSSEEECCCC--------------H---HHHHHHHHHHCEE-CCT-------TCEEEGGG
T ss_pred HHHHHhcCCCCCccee-cCCCceEEEecCC--------------H---HHHHHHHHhcCee-ecC-------CceEEEee
Confidence 99998873 36544 3344444432111 1 2344455566864 333 26999853
Q ss_pred CCCcHHHHHHHHHHHHHH
Q 038818 461 TLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 461 ~~tt~~did~~i~~l~~~ 478 (486)
.++++++++++.|+++
T Consensus 380 --~~~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 380 --MTPDNMAPLCEAIVAV 395 (396)
T ss_dssp --CCTTTHHHHHHHHHHH
T ss_pred --cCHHHHHHHHHHHHhc
Confidence 3677999999999875
No 199
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.80 E-value=2.5e-18 Score=178.80 Aligned_cols=360 Identities=8% Similarity=0.016 Sum_probs=214.5
Q ss_pred HHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHc-C-CCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHH
Q 038818 86 IAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEML-K-LPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILN 163 (486)
Q Consensus 86 ~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~-g-~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~ 163 (486)
++.++.++..+.... ..+.......++++.+.+++.+.. + .+... ....++|+|||+|+..++.+.....+
T Consensus 117 ~~~~v~a~~~~~~~~--~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~----~~~i~~t~G~t~al~~~~~~l~~~~l- 189 (533)
T 3f6t_A 117 RDKVVAEWVNGAVAN--NYPVPDRCLVNTEKIINYFLQELSYKDANLAE----QTDLFPTEGGTAAIVYAFHSLAENHL- 189 (533)
T ss_dssp HHHHHHHHHHHHHTC--SCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGG----GEEEEEEEHHHHHHHHHHHHHHHTTS-
T ss_pred CcHHHHHHHHHHHhC--CCCCCcccHHHHHHHHHHHHHHhcCCCCCCCC----cceEEEECCHHHHHHHHHHHhhhhhc-
Confidence 567777666655432 122234456789999999997773 3 32210 02689999999999877765322100
Q ss_pred HccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCC--CCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCc
Q 038818 164 EIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTK--SSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTT 241 (486)
Q Consensus 164 ~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~--~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt 241 (486)
-.+++.|+++..+|.++..+++..|. +++.+|++. +.++.+|+++|++++++. +.+|+++.++|
T Consensus 190 -----~~~gd~Viv~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~d~~~l~~~l~~~------~k~v~l~~p~N 255 (533)
T 3f6t_A 190 -----LKKGDKIAINEPIFTPYLRIPELKDY---ELVEVDLHSYEKNDWEIEPNEIEKLKDPS------IKALIVVNPTN 255 (533)
T ss_dssp -----SCTTCEEEEESSCCHHHHTSGGGGGS---EEEEECCCEETTTTSEECHHHHHHHSCTT------EEEEEEESSCT
T ss_pred -----cCCcCEEEEcCCCcHHHHHHHHHcCC---eEEEEEecCCcccCCCCCHHHHHHHhCCC------CeEEEEeCCCC
Confidence 01567888999999999999999999 899999864 346899999999988643 45788889999
Q ss_pred cccccCCch---HHHHHHH-HhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchH
Q 038818 242 AITTVDPLG---PLCDIAK-RYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNA 316 (486)
Q Consensus 242 ~~G~idpl~---~I~~i~~-~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~ 316 (486)
++|.+-|.+ +|+++|+ +||+++++|++|+.+......... .....+.++.+++|.++.| ..+|+++.+++..
T Consensus 256 PtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~---~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~ 332 (533)
T 3f6t_A 256 PTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYS---VVPYNTMLVYSYSKLFGCTGWRLGVIALNEKNV 332 (533)
T ss_dssp TTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHH---HSGGGEEEEEESHHHHTCGGGCEEEEEEESSCH
T ss_pred CCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhh---cCCCCEEEEecCcccCCCcccceEEEEECcHHH
Confidence 999997765 8888888 689999999999865432211111 1124557888999999743 3489988887744
Q ss_pred HHHHhcCCcc---------cccCccCCCCCccCC--------CCccccCCCCCCchHHHH----HHHHh--------chH
Q 038818 317 LIKALSTNPE---------FLRNKASDSKQVVDY--------KDWQITLSRRFRALKLWL----VLRSF--------GVA 367 (486)
Q Consensus 317 ~~~~~~~~~~---------y~~~~~~~~~~~~~~--------~~~~~~~sr~~~~l~~~~----~l~~~--------g~~ 367 (486)
+.+....-++ |-.... ......+ .......+.........+ ++..+ ..+
T Consensus 333 ~~~li~~l~~~~~~~~~~~~~~~~~--~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~~ 410 (533)
T 3f6t_A 333 FDDNIAHLDKVELRQLHKRYSSVVL--DPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDP 410 (533)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHTTCS--CGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCH
T ss_pred HHHHHHhcchhhHHHHHhhhhcccc--CcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchHH
Confidence 3322211110 000000 0000000 000000000111222221 23333 235
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCeeEEEE-EeecCCCCCCCCCCccchHH---------HHHHHHHHH-H
Q 038818 368 NLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFAVVCF-RVLPSASGLGDGKANEGANE---------LNRKLLESI-N 436 (486)
Q Consensus 368 g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~---------~~~~l~~~l-~ 436 (486)
.++++.++..++++++.+.|. + ++.+. ++..+.+.+ .+..... ...... ...++..++ .
T Consensus 411 ~~~~~~~~~~~r~~~l~~~L~-~-~~~~~-~~~~g~~~~~~l~~~~~-------~~~g~~~~~~~~~~~~~~~~~~~ll~ 480 (533)
T 3f6t_A 411 YIDIARKLVSERYDQLHDAMQ-A-PKDET-DTNTHYYSLIDIYRLAE-------KIYGKEFRDYLTNNFEQVDFLLKLAE 480 (533)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-C-CCCCS-TTBCCSEEEEEHHHHHH-------HHHCHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcC-C-Ccccc-CCCceEEEEEehHhhhh-------hccchHHHHHhhccCCHHHHHHHHHH
Confidence 677778888889999999997 5 45543 444444443 2221000 000000 012333333 4
Q ss_pred hcCcEEEeeeeEC-CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 437 ASGQLYVSHGMVA-GIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 437 ~~g~~~~~~~~~~-~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
+.|+.+.++..+. +.+++|+++.+ .++++|+++++.|.++++++.
T Consensus 481 ~~GV~v~pg~~f~~~~~~iRls~a~--~~~e~i~~~i~~L~~~l~~~~ 526 (533)
T 3f6t_A 481 KNGVVLVDGVGFGAKPGELRVSQAN--LPTEDYALIGKQVLELLKEYY 526 (533)
T ss_dssp HTTSSSCTTEEECSSTTEEEEESSS--SCHHHHHHHHHHHHHHHHHHH
T ss_pred hCCEEEeCCcccCCCCCEEEEEEee--CCHHHHHHHHHHHHHHHHHHH
Confidence 5687543333222 25689999853 467799999999999987764
No 200
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.80 E-value=3.2e-17 Score=167.20 Aligned_cols=329 Identities=11% Similarity=0.070 Sum_probs=187.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.....++.+.++++++...+ ..++|+|||+|+..++.+++.... ..|..+ ++.+|+.+...|.+...++..
T Consensus 92 ~~~~~~l~~~la~~~~~~~~-------~v~~~~ggsea~~~al~~~~~~~~-~~g~~~-~~~vi~~~~~yhg~~~~~~~~ 162 (449)
T 3a8u_X 92 HPLSFQLAEKITDLTPGNLN-------HVFFTDSGSECALTAVKMVRAYWR-LKGQAT-KTKMIGRARGYHGVNIAGTSL 162 (449)
T ss_dssp CHHHHHHHHHHHTTSSTTEE-------EEEEESSHHHHHHHHHHHHHHHHH-HTTCTT-CCEEEEETTCCCCSSHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEcCcHHHHHHHHHHHHHHHHH-hcCCCC-CCEEEEECCCcCCCChhhhhc
Confidence 34555677888888875443 689999999999999988875321 111110 233444465666665656665
Q ss_pred cCC-------C--CCCeEEEecCCC--CC-cccC--------HHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---
Q 038818 192 AGI-------D--PKNFRAIKTTKS--SS-FTLT--------PESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP--- 248 (486)
Q Consensus 192 ~G~-------g--~~~v~~v~~d~~--~~-~~~d--------~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp--- 248 (486)
.|. + ...+..++++.. .+ ..+| +++|+++|++.. ...+.+|+++...+++|.+.|
T Consensus 163 ~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~--~~~~~~vi~~p~~~~tG~~~~~~~ 240 (449)
T 3a8u_X 163 GGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHD--ASNIAAVFVEPLAGSAGVLVPPEG 240 (449)
T ss_dssp CCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTCBCCCTT
T ss_pred cCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcC--CCCEEEEEEcCccCCCCCccCCHH
Confidence 542 1 114566665421 00 0246 999999997531 012456666666677998888
Q ss_pred -chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcc
Q 038818 249 -LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPE 326 (486)
Q Consensus 249 -l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~ 326 (486)
+++|.++|++||+++++|++|.++......+.....++ ..|.+++ .|++++. ...|++++++ +... .+.....
T Consensus 241 ~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~-~~di~s~--sK~l~~G~~~~G~~~~~~-~~~~-~l~~~~~ 315 (449)
T 3a8u_X 241 YLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGV-TPDLMCI--AKQVTNGAIPMGAVIAST-EIYQ-TFMNQPT 315 (449)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSSCCEEEEEEH-HHHH-HHHTCSS
T ss_pred HHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCC-CCCEEEE--cccccCCCCceEEEEECH-HHHH-HhhccCc
Confidence 99999999999999999999965422111111111122 3576644 5998854 4588888875 3332 3321100
Q ss_pred cccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe--cCCCeeEE
Q 038818 327 FLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIV--APRNFAVV 404 (486)
Q Consensus 327 y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~--~~~~~~~v 404 (486)
... ... + ....+-....+.+.+++..+..-.-+++.++..++.+++++.|++++.+.++ .++...++
T Consensus 316 ---~~~---~~~--~---~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~ 384 (449)
T 3a8u_X 316 ---PEY---AVE--F---PHGYTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAG 384 (449)
T ss_dssp ---CTT---SCS--S---CCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEE
T ss_pred ---ccc---ccc--c---cccCCCcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEE
Confidence 000 000 0 0001111233333333333211000246677888889999998774322211 12334566
Q ss_pred EEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 405 CFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 405 ~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
.+.+.... ... ......+.+.|.++|+++ .+. + .++|+++. ..+++++++++++.|+++++++
T Consensus 385 ~i~~~~~~--------~~~-~~~~~~~~~~l~~~Gv~v-~~~---g-~~iRis~~-~~~t~~~i~~~l~~l~~~l~~~ 447 (449)
T 3a8u_X 385 AIQIAPRD--------GDA-IVRPFEAGMALWKAGFYV-RFG---G-DTLQFGPT-FNSKPQDLDRLFDAVGEVLNKL 447 (449)
T ss_dssp EEEECCBT--------TBS-SHHHHHHHHHHHHHTEEC-EEE---T-TEEEECCC-TTCCHHHHHHHHHHHHHHHHHC
T ss_pred EEEEecCc--------ccc-cccHHHHHHHHHHCCcEE-ecC---C-CEEEEECC-CcCCHHHHHHHHHHHHHHHHHH
Confidence 66665321 000 001124666777778753 332 3 68999973 4778889999999999988765
No 201
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.79 E-value=3e-18 Score=172.25 Aligned_cols=235 Identities=12% Similarity=0.069 Sum_probs=160.8
Q ss_pred HHHHHHHHHcCCCCCCccCCCcceEE---cCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecC-CCchHHH------
Q 038818 117 IVMDWLGEMLKLPKSFLFSGTGGGVI---QGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSD-QTHSALQ------ 186 (486)
Q Consensus 117 ~~~~~l~~l~g~~~~~~~~~~~~~~~---t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~-~~H~s~~------ 186 (486)
++.+.+++++|.+. .++ ++|||+||..++.+... +++.|+++. ..|....
T Consensus 77 ~Le~~lA~l~g~e~---------alv~p~~~sGt~Ai~~al~all~-----------pGD~Vl~~~~~~y~~~~~~~g~~ 136 (427)
T 3i16_A 77 SLDAVYARVFNTES---------ALVRPHFVNGTHALGAALFGNLR-----------PGNTMLSVCGEPYDTLHDVIGIT 136 (427)
T ss_dssp HHHHHHHHHHTCSE---------EEEETTCCSHHHHHHHHHHHHCC-----------TTCEEEESSSSCCGGGHHHHTCS
T ss_pred HHHHHHHHHhCCcc---------eEEeCCCccHHHHHHHHHHHHhC-----------CCCEEEEeCCCccHHHHHHHhcc
Confidence 34467899999864 355 89999999877766533 667788887 7776655
Q ss_pred -----HHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeec----CCccccccCCchHHHHHHH
Q 038818 187 -----KAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATV----GTTAITTVDPLGPLCDIAK 257 (486)
Q Consensus 187 -----~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~----gtt~~G~idpl~~I~~i~~ 257 (486)
..++..|+ +++.+|+++ ++.+|+++|++++++. ..+.+|+++. ++|++|.+.|+++|+++|+
T Consensus 137 ~~~~~~~l~~~G~---~~~~v~~~~--~g~~D~e~l~~~l~~~----~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~ 207 (427)
T 3i16_A 137 ENSNMGSLKEFGI---NYKQVDLKE--DGKPNLEEIEKVLKED----ESITLVHIQRSTGYGWRRALLIEDIKSIVDCVK 207 (427)
T ss_dssp CCCSSCCTGGGTC---EEEECCCCT--TSSCCHHHHHHHHHTC----TTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHH
T ss_pred ccchHHHHHHcCC---EEEEecCcc--CCCcCHHHHHHHhhCC----CCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHH
Confidence 33455688 888888875 5689999999999731 1245788887 8999999999999999999
Q ss_pred H--hCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC--cceEEEeeCchHHHHHhcC-CcccccCcc
Q 038818 258 R--YSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL--DCCCLWVKNPNALIKALST-NPEFLRNKA 332 (486)
Q Consensus 258 ~--~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~--~~g~~~~~~~~~~~~~~~~-~~~y~~~~~ 332 (486)
+ +|+++|||++|+.+........ .++|.++.++||+++++. .+|+++.+ ++...+.... ....+.
T Consensus 208 ~~~~g~~livD~a~~~~~~~~~p~~------~gaDiv~~S~sK~lgg~g~~~gG~i~~~-~~li~~l~~~~~~~~~g--- 277 (427)
T 3i16_A 208 NIRKDIICFVDNCYGEFMDTKEPTD------VGADLIAGSLIKNIGGGIAPTGGYLAGT-KDCIEKTSYRLTVPGIG--- 277 (427)
T ss_dssp HHCTTSEEEEECTTTTTSSSSCGGG------GTCSEEEEETTSGGGTTTCCSCEEEEEC-HHHHHHHHHHHSCTTTG---
T ss_pred HhCCCCEEEEECCCccccccCCccc------cCCeEEEecCcccCCCCCCceEEEEEEC-HHHHHHHHHhcccCccC---
Confidence 9 9999999999986553221111 268999999999998742 24666654 4443322110 111110
Q ss_pred CCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCee-----EEEEE
Q 038818 333 SDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFA-----VVCFR 407 (486)
Q Consensus 333 ~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~-----~v~f~ 407 (486)
...+-.+. ..|..++ |......++++..+++.++++.|+++ ++++. |.... +++|.
T Consensus 278 -------------~~~~~~~~--~a~~~l~--gl~~~~~r~~~~~~~a~~la~~L~~~-g~~V~-p~~~~~~~~~i~~i~ 338 (427)
T 3i16_A 278 -------------GECGSTFG--VVRSMYQ--GLFLAPHISMEALKGAILCSRIMELA-GFEVM-PKYDEKRSDIIQSIK 338 (427)
T ss_dssp -------------GGCCCCTT--CHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEE-SCTTSCCSSSCEEEE
T ss_pred -------------ccCCccHH--HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhC-CCeec-CCCCCCCccEEEEEE
Confidence 01110011 1355554 34556778899999999999999998 56774 33334 77887
Q ss_pred ee
Q 038818 408 VL 409 (486)
Q Consensus 408 ~~ 409 (486)
+.
T Consensus 339 l~ 340 (427)
T 3i16_A 339 FN 340 (427)
T ss_dssp CS
T ss_pred EC
Confidence 75
No 202
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.79 E-value=7.7e-18 Score=171.20 Aligned_cols=301 Identities=10% Similarity=0.019 Sum_probs=181.2
Q ss_pred HHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcC
Q 038818 114 LENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAG 193 (486)
Q Consensus 114 le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G 193 (486)
...++.+++++++|. + ..++++||++|+..++.+++.......|....++.+|+.....|.+...++...|
T Consensus 119 ~~~~l~~~la~~~g~--~-------~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g 189 (439)
T 2oat_A 119 VLGEYEEYITKLFNY--H-------KVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSST 189 (439)
T ss_dssp SHHHHHHHHHHHHTC--S-------EEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCC
T ss_pred HHHHHHHHHHHhcCC--C-------EEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCC
Confidence 344555667777773 2 5899999999999999988753211111000013455555556666666655554
Q ss_pred C-------C--CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC----CchHHHHHHHHhC
Q 038818 194 I-------D--PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD----PLGPLCDIAKRYS 260 (486)
Q Consensus 194 ~-------g--~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id----pl~~I~~i~~~~g 260 (486)
. + ...++.+|.+ |+++|+++|+. ..+.+|+++...+++|.+. ++++|.++|++||
T Consensus 190 ~~~~~~~~~p~~~~v~~~~~~-------d~~~le~~l~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g 257 (439)
T 2oat_A 190 DPTSYDGFGPFMPGFDIIPYN-------DLPALERALQD-----PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQ 257 (439)
T ss_dssp CHHHHTTSCSCCTTEEEECSS-------CHHHHHHHTTS-----TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTT
T ss_pred ChhcccCCCCCCCCeEEeCCC-------CHHHHHHHhCC-----CCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 1 1 0256667642 89999998851 1245677766666788765 7999999999999
Q ss_pred ceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCCCCCcc
Q 038818 261 IWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVV 339 (486)
Q Consensus 261 ~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~ 339 (486)
+++++|++|.++......+.....++ ..|.+ +.+|++++. ...|+++++++ .. +.+.. ....
T Consensus 258 illI~DEv~~g~g~~g~~~~~~~~~~-~~Di~--t~sK~l~~G~~~~G~v~~~~~-~~-~~l~~---~~~~--------- 320 (439)
T 2oat_A 258 VLFIADEIQTGLARTGRWLAVDYENV-RPDIV--LLGKALSGGLYPVSAVLCDDD-IM-LTIKP---GEHG--------- 320 (439)
T ss_dssp CEEEEECTTTTTTTTSSSSGGGGGTC-CCSEE--EECGGGGTTSSCCEEEEECHH-HH-TTSCT---TSSC---------
T ss_pred CEEEEeccccCCccCCcchhHHHhCC-CCcEE--EecccccCCCCCeEEEEECHH-HH-hccCC---CCcc---------
Confidence 99999999965321111111011122 46766 456999876 56898888753 22 22211 0000
Q ss_pred CCCCccccCCCCCCchHH---HHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEe--cCCCeeEEEEEeecCCCC
Q 038818 340 DYKDWQITLSRRFRALKL---WLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIV--APRNFAVVCFRVLPSASG 414 (486)
Q Consensus 340 ~~~~~~~~~sr~~~~l~~---~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~--~~~~~~~v~f~~~~~~~~ 414 (486)
.++ ....+.+ ..+++.+.. ++..++..++++++++.|+++ ++.++ .++...++.+.+....
T Consensus 321 ----~t~----~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~g~~~~v~l~~~~-- 386 (439)
T 2oat_A 321 ----STY----GGNPLGCRVAIAALEVLEE---ENLAENADKLGIILRNELMKL-PSDVVTAVRGKGLLNAIVIKETK-- 386 (439)
T ss_dssp ----CSS----TTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHTTS-CTTTEEEEEEETTEEEEEECCCS--
T ss_pred ----cCC----CcCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHh-cCCCcEEEEeeeeEEEEEEecCc--
Confidence 011 1123333 334443322 246778888999999999876 33221 1223456666664320
Q ss_pred CCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 415 LGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 415 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
.. ...++.+.+.++|++ +.+ .+..++|+++ +...+++|++++++.|++++++
T Consensus 387 ------~~----~~~~l~~~l~~~Gv~-v~~---~~~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 387 ------DW----DAWKVCLRLRDNGLL-AKP---THGDIIRFAP-PLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp ------SC----CHHHHHHHHHHTTEE-CCB---SSSSEEEECC-CTTCCHHHHHHHHHHHHHHHHT
T ss_pred ------cH----HHHHHHHHHHHCCeE-Eec---CCCCEEEEEC-ccCCCHHHHHHHHHHHHHHHHh
Confidence 00 123567777778874 333 2356899987 4577889999999999998764
No 203
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.79 E-value=2.7e-18 Score=171.98 Aligned_cols=234 Identities=10% Similarity=-0.008 Sum_probs=160.2
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEE---cCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecC-CCchHHHHH---
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVI---QGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSD-QTHSALQKA--- 188 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~---t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~-~~H~s~~~a--- 188 (486)
.++.+.+++++|.+. .++ ++|||+||..++.+... +++.|+++. ..|......
T Consensus 62 ~~Le~~lA~l~g~e~---------alv~p~~~sGt~Ai~~al~all~-----------~GD~Vl~~~~~~y~~~~~~~~~ 121 (409)
T 3jzl_A 62 DTLERVYATVFKTEA---------ALVRPQIISGTHAISTVLFGILR-----------PDDELLYITGQPYDTLEEIVGI 121 (409)
T ss_dssp HHHHHHHHHHHTCSE---------EEEETTSCSHHHHHHHHHHHHCC-----------TTCEEEECSSSCCTTHHHHHTS
T ss_pred HHHHHHHHHHhCCCc---------EEEECCCccHHHHHHHHHHHhcC-----------CCCEEEEeCCCCcHhHHHHHhc
Confidence 344467889999764 355 89999999877766533 667788887 777776643
Q ss_pred -------HHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeec----CCccccccCCchHHHHHHH
Q 038818 189 -------AQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATV----GTTAITTVDPLGPLCDIAK 257 (486)
Q Consensus 189 -------~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~----gtt~~G~idpl~~I~~i~~ 257 (486)
++..|+ +++.+|+++ ++.+|+++|++++++. +.+|+++. ++|++|.+.|+++|+++|+
T Consensus 122 ~g~~~~~l~~~G~---~~~~v~~~~--~g~~d~e~l~~ai~~~------tklV~i~~s~g~p~nptg~v~~l~~I~~la~ 190 (409)
T 3jzl_A 122 RKQGQGSLKDFHI---GYSSVPLLE--NGDVDFPRIAKKMTPK------TKMIGIQRSRGYADRPSFTIEKIKEMIVFVK 190 (409)
T ss_dssp SSSSSSCTGGGTC---EEEECCCCT--TSCCCHHHHHHHCCTT------EEEEEEECSCTTSSSCCCCHHHHHHHHHHHH
T ss_pred ccchhhHHHHcCC---EEEEeCCCC--CCCcCHHHHHHhccCC------CeEEEEECCCCCCCCCcCccccHHHHHHHHH
Confidence 355677 888898875 5799999999998653 45788888 9999999999999999999
Q ss_pred H--hCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC--cceEEEeeCchHHHHHhc-CCcccccCcc
Q 038818 258 R--YSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL--DCCCLWVKNPNALIKALS-TNPEFLRNKA 332 (486)
Q Consensus 258 ~--~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~--~~g~~~~~~~~~~~~~~~-~~~~y~~~~~ 332 (486)
+ +|+++|||++|+.+........ .++|.++.++||+++++. ..|+++. +++....... ...+++..
T Consensus 191 ~~~~~~~livD~a~~~~~~~~~p~~------~g~Div~~S~sK~lgg~~~~~GG~v~~-~~~li~~l~~~~~~~~~g~-- 261 (409)
T 3jzl_A 191 NINPEVIVFVDNCYGEFVEYQEPPE------VGADIIAGSLIKNPGGGLAKTGGYIAG-KEALVDLCGYRLTTPGIGR-- 261 (409)
T ss_dssp HHCTTCEEEEECTTCTTTSSCCSGG------GTCSEEEEETTSGGGTTTCSSCEEEEE-CHHHHHHHHHHHSCTTTGG--
T ss_pred hhCCCCEEEEeCCcccccccCCccc------cCCeEEEECccccCCccCCceEEEEEe-CHHHHHHHHHHhccccccc--
Confidence 9 9999999999986543221111 268999999999998753 2355555 4544433221 01111110
Q ss_pred CCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCee-----EEEEE
Q 038818 333 SDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFA-----VVCFR 407 (486)
Q Consensus 333 ~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~-----~v~f~ 407 (486)
..+-... ..|..++ |.+....++++..+++.++++.|+++ ++++. +.... +++|.
T Consensus 262 --------------~~g~~~~--~~~~~l~--gl~~~~~r~~~~~~~a~~la~~L~~~-g~~v~-p~~~~~~~~~i~~i~ 321 (409)
T 3jzl_A 262 --------------EAGASLY--SLLEMYQ--GFFLAPHVTAQAIKGARFTAAMLAEF-GVEAD-PVWDAPRTDLIQSVS 321 (409)
T ss_dssp --------------GCCCCTT--CHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEE-SCTTSCCSSSCCEEE
T ss_pred --------------cccccHH--HHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHhC-CCccc-CCCCCCCccEEEEEE
Confidence 0110111 1233443 33556678888999999999999998 67874 32333 67777
Q ss_pred ee
Q 038818 408 VL 409 (486)
Q Consensus 408 ~~ 409 (486)
+.
T Consensus 322 l~ 323 (409)
T 3jzl_A 322 FH 323 (409)
T ss_dssp CS
T ss_pred eC
Confidence 75
No 204
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.79 E-value=3.4e-17 Score=167.19 Aligned_cols=316 Identities=9% Similarity=-0.044 Sum_probs=188.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCC-eEEEecCCCchHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISR-LVVYGSDQTHSALQKAAQ 190 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~a~~ 190 (486)
.....++.++++++++...+ ..++++|||+||..|+.+++...... +.. ++ .+|......|-+...+..
T Consensus 117 ~~~~~~L~e~la~~~~~~~~-------~v~~~~sGseA~~~Alk~a~~~~~~~-g~~--g~~~ii~~~~~yhg~~~~~~~ 186 (457)
T 3tfu_A 117 HEPAARLAKLLVDITPAGLD-------TVFFSDSGSVSVEVAAKMALQYWRGR-GLP--GKRRLMTWRGGYHGDTFLAMS 186 (457)
T ss_dssp CHHHHHHHHHHHHHSSTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCT--TCCEEEEETTCCCCSSHHHHT
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCcHHHHHHHHHHHHHHHHHhc-CCC--CCceEEEEcCCcCCccHHhhc
Confidence 34555778889999876544 68999999999999999988753221 111 23 344444455544333322
Q ss_pred HcC-C---------CCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeec-CCccccccCC----chHHHHH
Q 038818 191 IAG-I---------DPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATV-GTTAITTVDP----LGPLCDI 255 (486)
Q Consensus 191 ~~G-~---------g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~-gtt~~G~idp----l~~I~~i 255 (486)
..+ . ....+..+|....+....|+++|+++|++... .+.+|+++. .++++|.+-| +++|+++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~---~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l 263 (457)
T 3tfu_A 187 ICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAG---ELAAVVVEPVVQGAGGMRFHDPRYLHDLRDI 263 (457)
T ss_dssp TSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGG---GEEEEEECSSEECTTTCEECCTHHHHHHHHH
T ss_pred ccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCC---CEEEEEEeCCCcCCCCcccCCHHHHHHHHHH
Confidence 211 0 01134555554322234689999999986421 345677777 7888898866 9999999
Q ss_pred HHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcC-Ccc-cccCcc
Q 038818 256 AKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALST-NPE-FLRNKA 332 (486)
Q Consensus 256 ~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~-~~~-y~~~~~ 332 (486)
|++||++|++|++|.++......+.....++ ..|.+++ .|.+++++ +.|.++.+++ .. +.+.. .+. +...
T Consensus 264 ~~~~gillI~DEv~~g~gr~G~~~a~~~~~~-~pdiit~--sK~l~gG~~~lG~v~~~~~-i~-~~~~~~~~~~~~~~-- 336 (457)
T 3tfu_A 264 CRRYEVLLIFDEIATGFGRTGALFAADHAGV-SPDIMCV--GKALTGGYLSLAATLCTAD-VA-HTISAGAAGALMHG-- 336 (457)
T ss_dssp HHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEE--CGGGGTTSSCCEEEEEEHH-HH-HHHHHSSSCSCCCC--
T ss_pred HHHcCCEEEEEcCccCCccccchhHhHhcCC-CceEEEE--ChhhhCCCcceEEEEEcHH-HH-HHhhccCCCceeEe--
Confidence 9999999999999976432111111111122 4677755 59888764 7888888754 22 22311 111 1100
Q ss_pred CCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC---CCeEEecCCCeeEEEEEee
Q 038818 333 SDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGD---NRFEIVAPRNFAVVCFRVL 409 (486)
Q Consensus 333 ~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~~~~~~~~~~v~f~~~ 409 (486)
.+-....+.+.+++..+..-.-+++.++..++.+++++.|+++ |.+..+ .....++.+.+.
T Consensus 337 ---------------~t~~~n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-r~~G~~~~i~l~ 400 (457)
T 3tfu_A 337 ---------------PTFMANPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTARALPAVTDV-RVCGAIGVIECD 400 (457)
T ss_dssp ---------------CTTTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGGGSTTEEEE-EECSSCEEEEES
T ss_pred ---------------cCCCcCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCeeee-ecCCeEEEEEEC
Confidence 1112234444444443321011245677777888888888764 444433 223456666664
Q ss_pred cCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 410 PSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
... + ..++.+.+.++|++ +.+. ..++|+++ ....|++||++++++|+++++++.
T Consensus 401 ~~~------------~--~~~~~~~l~~~Gv~-v~~~----~~~lRi~p-~~~~t~eei~~~l~~L~~~l~~~~ 454 (457)
T 3tfu_A 401 RPV------------D--LAVATPAALDRGVW-LRPF----RNLVYAMP-PYICTPAEITQITSAMVEVARLVG 454 (457)
T ss_dssp SCC------------C--HHHHHHHHHHTTEE-CCCB----TTEEEECC-CTTCCHHHHHHHHHHHHHHHHHC-
T ss_pred Ccc------------c--HHHHHHHHHHCCeE-EEec----CCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHhc
Confidence 321 1 34567777788874 3331 25799886 356688899999999999988764
No 205
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.79 E-value=1.6e-17 Score=168.53 Aligned_cols=319 Identities=11% Similarity=-0.002 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHc
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIA 192 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 192 (486)
....++.+.+++++|.+.+ ..++|+||++|+..++.+++... + ++.+|+.....|.+...+....
T Consensus 85 ~~~~~l~~~la~~~~~~~~-------~v~~~~gg~ea~~~a~~~~~~~~-------~-~~~vi~~~~~yhg~~~~~~~~~ 149 (433)
T 1zod_A 85 RPVVDLATRLANITPPGLD-------RALLLSTGAESNEAAIRMAKLVT-------G-KYEIVGFAQSWHGMTGAAASAT 149 (433)
T ss_dssp HHHHHHHHHHHHHSCTTCC-------EEEEESCHHHHHHHHHHHHHHHH-------T-CCEEEEETTCCCCSSHHHHHTC
T ss_pred HHHHHHHHHHHHhCCCCcC-------EEEEeCchHHHHHHHHHHHHHhh-------C-CCeEEEECCCcCCCChhHHhhc
Confidence 4555677888999887544 68999999999999998776421 0 2334444445565554444332
Q ss_pred CC--------CCCCeEEEecCCC--C--------CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----ch
Q 038818 193 GI--------DPKNFRAIKTTKS--S--------SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LG 250 (486)
Q Consensus 193 G~--------g~~~v~~v~~d~~--~--------~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~ 250 (486)
+. -...+..++++.. . .+.+|+++|+++|++. ....+.+|+++...+++|.+-| ++
T Consensus 150 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~~~~vi~~p~~~~~G~~~~~~~~l~ 227 (433)
T 1zod_A 150 YSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQ--SSGNLAAFIAEPILSSGGIIELPDGYMA 227 (433)
T ss_dssp CSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHH--CCSCEEEEEECSEETTTTCEECCTTHHH
T ss_pred CCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhc--CCCCeEEEEEccccCCCCcccCCHHHHH
Confidence 21 0124566665320 0 1135799999999753 1123455666655677897665 99
Q ss_pred HHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccC
Q 038818 251 PLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRN 330 (486)
Q Consensus 251 ~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~ 330 (486)
+|+++|++||+++++|++|+++......+.....++ ..|.++ +.|+++.+.++|+++.+++ ... .+... .+...
T Consensus 228 ~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~-~~di~s--~sK~~~~G~~ig~~~~~~~-~~~-~~~~~-~~~~~ 301 (433)
T 1zod_A 228 ALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGV-TPDILT--LSKTLGAGLPLAAIVTSAA-IEE-RAHEL-GYLFY 301 (433)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEE--ECHHHHTTSSCEEEEECHH-HHH-HHHHT-TCCCC
T ss_pred HHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCC-CCCEEE--ecccccCCCCeeEEEEhHH-HHH-hhccC-CCCCC
Confidence 999999999999999999986432111111011122 356655 4599987778899988753 322 22110 01100
Q ss_pred ccCCCCCccCCCCccccCCCCCCchHHHH---HHHHhchHHHHHHHHHHHHHHHHHHHHHhC----CCCeEEecCCCeeE
Q 038818 331 KASDSKQVVDYKDWQITLSRRFRALKLWL---VLRSFGVANLRNFLRSHVRMAQLFQELVGG----DNRFEIVAPRNFAV 403 (486)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~sr~~~~l~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~ 403 (486)
.+-....+.+.+ +++.+..+ ++.++..++++++++.|++ .+.+... ++...+
T Consensus 302 -----------------~t~~~~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~~g~~ 360 (433)
T 1zod_A 302 -----------------TTHVSDPLPAAVGLRVLDVVQRD---GLVARANVMGDRLRRGLLDLMERFDCIGDV-RGRGLL 360 (433)
T ss_dssp -----------------CTTTTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTE
T ss_pred -----------------CCCCcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEE
Confidence 000112333333 33332222 3456667777777777765 3444333 233455
Q ss_pred EEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 404 VCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 404 v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
+.+.+...... .........++.+.+.++|+++.....+.+..++|+++ +...++++|+++++.|+++++++
T Consensus 361 ~~i~~~~~~~~------~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~~-~~~~t~~~i~~~l~~l~~~l~~~ 432 (433)
T 1zod_A 361 LGVEIVKDRRT------KEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAP-PLTVSEDEIDLGLSLLGQAIERA 432 (433)
T ss_dssp EEEEEEEETTT------TEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECC-CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCccc------cCCChHHHHHHHHHHHHCCCeEeccCCCCCCCEEEEEC-CcCCCHHHHHHHHHHHHHHHHHh
Confidence 66655431000 00001123467777778887543332222246899987 45778889999999999988765
No 206
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.78 E-value=8.8e-17 Score=164.08 Aligned_cols=329 Identities=11% Similarity=0.058 Sum_probs=183.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH
Q 038818 111 ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ 190 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 190 (486)
......++.++++++++.+. ..++|+|||+||..|+.+++...... +.. .++.+|+.....|.....+..
T Consensus 89 ~~~~~~~la~~l~~~~~~~~--------~v~~~~ggseA~~~al~~~~~~~~~~-g~~-~~~~vi~~~~~yhg~~~~~~~ 158 (452)
T 3n5m_A 89 SHEPAIKLAEKLNEWLGGEY--------VIFFSNSGSEANETAFKIARQYYAQK-GEP-HRYKFMSRYRGYHGNTMATMA 158 (452)
T ss_dssp EEHHHHHHHHHHHHHHTSCE--------EEEEESSHHHHHHHHHHHHHHHHHTT-TCT-TCCEEEEETTCCCCSSHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCc--------eEEEeCchHHHHHHHHHHHHHHHHhc-CCC-CCCEEEEECCCcCCCCHHHHh
Confidence 35666778899999987543 37999999999999999988542211 100 033444445555544433333
Q ss_pred HcCCC---------CCCeEEEecCCCCC----------cccCHHHHHHHHHHHHHCCCccEEEEeecC-CccccccCC--
Q 038818 191 IAGID---------PKNFRAIKTTKSSS----------FTLTPESLQAAIDLDIQAGLIPLFLCATVG-TTAITTVDP-- 248 (486)
Q Consensus 191 ~~G~g---------~~~v~~v~~d~~~~----------~~~d~~~L~~~l~~~~~~g~~p~~vv~~~g-tt~~G~idp-- 248 (486)
..|.. ...+..++....-. +..++++|+++|++. ....+.+|+++.. ++ +|.+-|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~~~vi~ep~~~n-~G~~~~~~ 235 (452)
T 3n5m_A 159 ATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWE--LSETIAAFIMEPIITG-GGILMAPQ 235 (452)
T ss_dssp SCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHH--CGGGEEEEEECSSBTT-TTCBCCCT
T ss_pred cCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhc--CCCCEEEEEEccccCC-CCeeeCCH
Confidence 33321 11345555421000 111289999999732 1123456777777 78 998876
Q ss_pred --chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcC--
Q 038818 249 --LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALST-- 323 (486)
Q Consensus 249 --l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~-- 323 (486)
+++|+++|++||++|++|++|.++......+.....++ ..|.+++ .|.++.+ .+.|+++.+++ . .+.+..
T Consensus 236 ~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~-~~di~t~--sK~l~~G~~~ig~~~~~~~-i-~~~~~~~~ 310 (452)
T 3n5m_A 236 DYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDV-KPDIITM--AKGITSAYLPLSATAVKRE-I-YEAFKGKG 310 (452)
T ss_dssp THHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-CCSEEEE--CGGGGTTSSCCEEEEEEHH-H-HGGGCSSS
T ss_pred HHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCC-CCCEEee--cccccCCCcceEEEEECHH-H-HHHHhhcc
Confidence 99999999999999999999976432111111111122 3666665 5888866 67888887543 2 223321
Q ss_pred -CcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEecC
Q 038818 324 -NPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELV----GGDNRFEIVAP 398 (486)
Q Consensus 324 -~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L----~~~~~~~~~~~ 398 (486)
...++. ..+-....+.+.+++..+..-.-+++.++..++.+++++.| .++|.+..+ +
T Consensus 311 ~~~~~~~-----------------~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~ 372 (452)
T 3n5m_A 311 EYEFFRH-----------------INTFGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEEIGEHPLVGDI-R 372 (452)
T ss_dssp TTCSCCC-----------------CCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEE-E
T ss_pred CCCCccc-----------------cCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-E
Confidence 011110 01112234444444443321111234455555555555555 445555443 2
Q ss_pred CCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeee--ECCEeEEEEEecCCCCcHHHHHHHHHHHH
Q 038818 399 RNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGM--VAGIYFIRFAVGATLTEDRHVIAAWKVVQ 476 (486)
Q Consensus 399 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--~~~~~~lR~~~~~~~tt~~did~~i~~l~ 476 (486)
+...++.+.+...... ..........++.+.+.++|+++..... .....++|+++ +...++++|+++++.|+
T Consensus 373 ~~g~~~~i~~~~~~~~-----~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~-~~~~t~e~i~~~l~~l~ 446 (452)
T 3n5m_A 373 GKGLLVGIELVNDKET-----KEPIDNDKIASVVNACKEKGLIIGRNGMTTAGYNNILTLAP-PLVISSEEIAFVIGTLK 446 (452)
T ss_dssp ESSSCEEEEEEEETTT-----TEECCHHHHHHHHHHHHHTTEECEECTTSSTTCCCEEEECC-CTTCCHHHHHHHHHHHH
T ss_pred EEEEEEEEEEecCCcc-----cCCCCHHHHHHHHHHHHHCCcEEeecCcccCCCCCEEEEEC-CCCCCHHHHHHHHHHHH
Confidence 2334445544321100 0000022345677788888975443321 11257899987 35678889999999999
Q ss_pred HHHHH
Q 038818 477 EKLDG 481 (486)
Q Consensus 477 ~~~~~ 481 (486)
+++++
T Consensus 447 ~~l~~ 451 (452)
T 3n5m_A 447 TAMER 451 (452)
T ss_dssp HHHTT
T ss_pred HHHHh
Confidence 88754
No 207
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.78 E-value=1.5e-16 Score=163.20 Aligned_cols=331 Identities=11% Similarity=0.040 Sum_probs=194.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH
Q 038818 111 ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ 190 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 190 (486)
......++.++++++++...+ ..++++||++||..|+.+++.....+ |..+ +..+|+.....|.+...+..
T Consensus 95 ~~~~~~~la~~l~~~~~~~~~-------~v~~~~sGseA~~~Aik~a~~~~~~~-g~~~-~~~vi~~~~~yHg~~~~~~~ 165 (476)
T 3i5t_A 95 ATSPAARLAEKIATLTPGDLN-------RIFFTTGGSTAVDSALRFSEFYNNVL-GRPQ-KKRIIVRYDGYHGSTALTAA 165 (476)
T ss_dssp BCHHHHHHHHHHHTTSSTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCTT-CCEEEEETTCCCCSSHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCCcC-------EEEEeCchHHHHHHHHHHHHHHHHhc-CCCC-CCEEEEEcCCcCcCChhhcc
Confidence 356667788999999875443 68999999999999999998764322 2111 23445455556655444444
Q ss_pred HcCCC---------CCCeEEEecCCC-CCcccC--------HHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----
Q 038818 191 IAGID---------PKNFRAIKTTKS-SSFTLT--------PESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---- 248 (486)
Q Consensus 191 ~~G~g---------~~~v~~v~~d~~-~~~~~d--------~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---- 248 (486)
..|.. ...+..++.... ..+..| +++|+++|++.. ...+.+|++....++.|.+-|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~--~~~~aavi~ep~~~~~G~~~~~~~~ 243 (476)
T 3i5t_A 166 CTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLG--PDTIAAFLAEPILASGGVIIPPAGY 243 (476)
T ss_dssp TCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTSBCCCTTH
T ss_pred ccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCcccCCHHH
Confidence 33321 123455553210 001222 789999887531 123567888888888887665
Q ss_pred chHHHHHHHHhCceEEeeccccchhccCccchhh-hcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCc-
Q 038818 249 LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHF-IDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNP- 325 (486)
Q Consensus 249 l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~-~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~- 325 (486)
+++|+++|++||++|++|++|.++......+... ..++ ..|.++++ |.+++. .+.|.++.+++ .. +.+....
T Consensus 244 L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v-~pdi~t~s--K~l~~G~~plg~v~~~~~-i~-~~~~~~~~ 318 (476)
T 3i5t_A 244 HARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGV-VPDIITFA--KGVTSGYVPLGGLAISEA-VL-ARISGENA 318 (476)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCC-CCSEEEEC--GGGGTTSSCCEEEEECHH-HH-HTTSGGGC
T ss_pred HHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCC-Ccchhhhh--hhhcCCCcCeEEEEECHH-HH-HHHhcCCc
Confidence 9999999999999999999998753222111111 1122 46777764 998876 67888887543 32 2222110
Q ss_pred ---ccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC---CCeEEecCC
Q 038818 326 ---EFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGD---NRFEIVAPR 399 (486)
Q Consensus 326 ---~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~~~~~~ 399 (486)
.+.. ..+-....+++.+++..+..-.-+++.++..++.+++++.|+++ |.+..+ .+
T Consensus 319 ~~~~~~~-----------------~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-~~ 380 (476)
T 3i5t_A 319 KGSWFTN-----------------GYTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAALASLRDLPGVAET-RS 380 (476)
T ss_dssp TTCEECC-----------------CCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTTTSTTEEEE-EE
T ss_pred ccccccc-----------------cCCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-Ee
Confidence 0110 01112234444444444321111356677778888888888754 334333 22
Q ss_pred CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 400 NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 400 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
...++.+.+....... ...........++.+.+.++|+++.. . + .++|++. ....++++|+++++.|++++
T Consensus 381 ~G~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~Gv~v~~-~---g-~~iRi~p-~l~~t~e~i~~~l~~l~~~l 451 (476)
T 3i5t_A 381 VGLVGCVQCLLDPTRA---DGTAEDKAFTLKIDERCFELGLIVRP-L---G-DLCVISP-PLIISRAQIDEMVAIMRQAI 451 (476)
T ss_dssp ETTEEEEEECCC--------CCHHHHHHHHHHHHHHHHTTEECEE-E---T-TEEEECC-CTTCCHHHHHHHHHHHHHHH
T ss_pred cCceeEEEEecCcccc---ccccchhHHHHHHHHHHHHCCCEEEe-c---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHH
Confidence 3345566554321000 00000112355778888888975433 2 3 6899986 35778899999999999998
Q ss_pred HHHhh
Q 038818 480 DGILA 484 (486)
Q Consensus 480 ~~l~~ 484 (486)
+++.+
T Consensus 452 ~~~~~ 456 (476)
T 3i5t_A 452 TEVSA 456 (476)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77653
No 208
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.78 E-value=1.2e-17 Score=168.30 Aligned_cols=351 Identities=12% Similarity=0.049 Sum_probs=203.6
Q ss_pred HHHHHHHHHhhhcCCCcCCCCCCcceecCCCCCHHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCC---
Q 038818 53 IETILQDVQQHIVPGITHWQSPYYFAYFPSSGSIAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLP--- 129 (486)
Q Consensus 53 ~~~il~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~--- 129 (486)
.-.+.+.+++.-.+...+.....|+++...+. +.+.+..........|...++..++++.+.+|+. |..
T Consensus 28 i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~-----v~~a~~~a~~~~~~~y~~~~g~~~lr~~ia~~~~---~~~~~~ 99 (409)
T 4eu1_A 28 ILGLGQDFRMDPAKRKVNLSIGVYRDDADQPF-----VLECVKQATLGTNMDYAPVTGIASFVEEAQKLCF---GPTCAA 99 (409)
T ss_dssp HHHHHHHHHHCCCSSCEECCCSSCCCTTSCCC-----CCHHHHTCCCCSCCCCCCTTCCHHHHHHHHHHHH---CSSCHH
T ss_pred HHHHHHHHhhCCCcCceeeeeeEEECCCCCEe-----ecHHHHhcCccccccCCCCCCcHHHHHHHHHHHc---CCCchh
Confidence 34555555544333333333333333322221 2233333333334455555556788887777763 433
Q ss_pred --CCCccCCCcce--EEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecC
Q 038818 130 --KSFLFSGTGGG--VIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTT 205 (486)
Q Consensus 130 --~~~~~~~~~~~--~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d 205 (486)
++ .. ..|.||++++..+...++.. ..+++.|+++..+|.++...++..|. +++.+|++
T Consensus 100 ~~~~-------~i~~~~~~~g~ga~~~~~~~~~~~--------~~~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~ 161 (409)
T 4eu1_A 100 LRDG-------RIASCQTLGGTGALRIGGDLLNRF--------VANCNRIYGPDVGYPNHESIFAKAGM---ELTPYSYY 161 (409)
T ss_dssp HHTT-------CEEEEEESHHHHHHHHHHHHGGGT--------SSSCCEEEEESSCCTHHHHHHHHTTC---EEEEECCE
T ss_pred hccC-------ceeeeecccchHHHHHHHHHHHHh--------cCCCCEEEEeCCCcHhHHHHHHHcCC---eEEEEEee
Confidence 22 33 34888898886554433221 01557888999999999999999999 99999984
Q ss_pred CCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHHHHhCceEEeeccccchhccCc--cch
Q 038818 206 KSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIAKRYSIWVHVDAAYAGSACICP--EFR 280 (486)
Q Consensus 206 ~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~~--~~~ 280 (486)
.++++.+|+++|++++++.. ..+.+++.+.++|++|.+-+ +++|+++|++||+++++|++|+.+..... ...
T Consensus 162 ~~~~~~~d~~~l~~~l~~~~---~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~ 238 (409)
T 4eu1_A 162 DPATKGLNLAGMLECLDKAP---EGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAF 238 (409)
T ss_dssp ETTTTEECHHHHHHHHHHSC---TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTH
T ss_pred cCcCCcCcHHHHHHHHHhCC---CCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchH
Confidence 33467999999999997521 12456777889999999976 55699999999999999999977543221 011
Q ss_pred h--hhcCCCCCC-ceeeccccccCCC-CcceEE--EeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCc
Q 038818 281 H--FIDGIEGAD-SFSLNAHKWFFTT-LDCCCL--WVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRA 354 (486)
Q Consensus 281 ~--~~~~~~~aD-si~~~~hK~l~~p-~~~g~~--~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~ 354 (486)
. .+.+. ..+ .+..+++|.++.| ..+|++ ++.++............+.... .. ....
T Consensus 239 ~~~~~~~~-~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~--------------~~---~~~~ 300 (409)
T 4eu1_A 239 VPRHLVDM-VPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPM--------------YN---NPPL 300 (409)
T ss_dssp HHHHHHTT-SSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHH--------------HS---SCCH
T ss_pred HHHHHHhh-CCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhh--------------cC---CCCh
Confidence 1 11111 233 4456788999844 457876 6666552111110000000000 00 0122
Q ss_pred hHHHHHHHHhc--------hHHHHHHHHHHHHHHHHHHHHHhCCC--C-eEEecCCCeeEEEEEeecCCCCCCCCCCccc
Q 038818 355 LKLWLVLRSFG--------VANLRNFLRSHVRMAQLFQELVGGDN--R-FEIVAPRNFAVVCFRVLPSASGLGDGKANEG 423 (486)
Q Consensus 355 l~~~~~l~~~g--------~~g~~~~~~~~~~~a~~l~~~L~~~~--~-~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~ 423 (486)
+..+++...+. .+.++++.++..++++++.+.|++++ + +++. ++..+++.|. +..
T Consensus 301 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~~~~~~~--~~~----------- 366 (409)
T 4eu1_A 301 YGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHI-ERQVGMMAYT--GLT----------- 366 (409)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHH-HHSCSSEEEC--CCC-----------
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccee-cCCceEEEEe--CCC-----------
Confidence 33333333332 23466778888899999999998862 1 5443 3444555551 110
Q ss_pred hHHHHHHHHHHHH-hcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 424 ANELNRKLLESIN-ASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 424 ~~~~~~~l~~~l~-~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
.+ +..++. +.|+. +.+. .|++++. . ++++|++++++|++++
T Consensus 367 -~~----~~~~ll~~~gv~-v~p~-------~Ri~~~~-~-~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 367 -RE----QVELLRSEYHIY-MTLN-------GRAAVSG-L-NSTNVEYVSQAIHNVT 408 (409)
T ss_dssp -HH----HHHHHHHHHCEE-CCTT-------CEEEGGG-C-CTTTHHHHHHHHHHHH
T ss_pred -HH----HHHHHHHcCCEE-EcCC-------CEEEEEe-c-CHhhHHHHHHHHHHHh
Confidence 12 233333 45764 4332 4888853 3 4457999999998865
No 209
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.77 E-value=7.6e-17 Score=165.18 Aligned_cols=328 Identities=12% Similarity=0.040 Sum_probs=190.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.....++.++++++++.+.+ ..++++||++||..|+.+++...... |..+ ++.+|......|-....+...
T Consensus 98 ~~~~~~lae~l~~~~~~~~~-------~v~~~~sGseA~~~aik~a~~~~~~~-g~~~-~~~ii~~~~~yHg~t~~~~~~ 168 (472)
T 3hmu_A 98 HVPAIALAQKLAELAPGDLN-------HVFFAGGGSEANDTNIRMVRTYWQNK-GQPE-KTVIISRKNAYHGSTVASSAL 168 (472)
T ss_dssp CHHHHHHHHHHHHHSCTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCTT-CCEEEEETTCCCCSSHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCCHHHHHHHHHHHHHHHHHhc-CCCC-CCEEEEEcCcCCCccHHhhhc
Confidence 45556677888888865443 68999999999999999998753221 1111 234444455556443333333
Q ss_pred cCC--------CCCCeEEEecCC--C-CCcccC--------HHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----
Q 038818 192 AGI--------DPKNFRAIKTTK--S-SSFTLT--------PESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---- 248 (486)
Q Consensus 192 ~G~--------g~~~v~~v~~d~--~-~~~~~d--------~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---- 248 (486)
.|. ....+..+|... . .++ +| +++|+++|++.. ...+.+|++....++.|.+-|
T Consensus 169 ~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~--~~~~aavi~epv~~~gG~~~~~~~~ 245 (472)
T 3hmu_A 169 GGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARARELEEAILELG--ENRVAAFIAEPVQGAGGVIVAPDSY 245 (472)
T ss_dssp SCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTCBCCCTTH
T ss_pred cCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHhcC--CCCEEEEEEcCccCCCCcccCCHHH
Confidence 221 112456666431 0 011 34 788998887531 123567777777888888877
Q ss_pred chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCccc
Q 038818 249 LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEF 327 (486)
Q Consensus 249 l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y 327 (486)
+++|+++|++||++|++|++|.++......+.....++ ..|.++++ |.+++. .+.|.++.+++ .. +.+.. ..+
T Consensus 246 l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v-~pdi~t~s--K~l~gg~~plG~v~~~~~-i~-~~~~~-~~~ 319 (472)
T 3hmu_A 246 WPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGI-RPHIMTIA--KGLSSGYAPIGGSIVCDE-VA-HVIGK-DEF 319 (472)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTC-CCSEEEEC--GGGTTTSSCCEEEEEEHH-HH-HHHTT-SCB
T ss_pred HHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCC-CCceeeec--hhhhcCCcceEEEEECHH-HH-Hhccc-CCc
Confidence 99999999999999999999987532221111111133 46777765 988876 47888888644 32 23311 111
Q ss_pred ccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHH-HHHHHHHHHHhCC---CCeEEecCCCeeE
Q 038818 328 LRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHV-RMAQLFQELVGGD---NRFEIVAPRNFAV 403 (486)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~-~~a~~l~~~L~~~---~~~~~~~~~~~~~ 403 (486)
.. ..+-....+++.+++..+..-.-+++.++.. ++.+++++.|+++ |.+..+ .+...+
T Consensus 320 ~~-----------------~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-r~~G~~ 381 (472)
T 3hmu_A 320 NH-----------------GYTYSGHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALTDHPLVGEA-KIVGMM 381 (472)
T ss_dssp CC-----------------CCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGGGSTTEEEE-EEETTE
T ss_pred cc-----------------cCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EecCce
Confidence 10 0111223444444444432111134556666 6777777777554 444433 233446
Q ss_pred EEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 404 VCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 404 v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
+.|.+....... .+. ..........+.+.+.++|+++... + .++|++. ....++++|++++++|+++++++.
T Consensus 382 ~~i~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~~Gv~v~~~----g-~~iRi~p-~~~~t~e~i~~~l~~l~~~l~~~~ 453 (472)
T 3hmu_A 382 ASIALTPNKASR-AKF-ASEPGTIGYICRERCFANNLIMRHV----G-DRMIISP-PLVITPAEIDEMFVRIRKSLDEAQ 453 (472)
T ss_dssp EEEEECSCGGGT-CCB-SSCTTHHHHHHHHHHHHTTBCCEEE----T-TEEEECC-CTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCcccc-ccc-cchhHHHHHHHHHHHHHCCcEEEec----C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 666664321000 000 0000233556778888889854332 2 6899986 457788899999999999887654
No 210
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.77 E-value=1.6e-16 Score=162.51 Aligned_cols=333 Identities=11% Similarity=0.050 Sum_probs=187.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.....++.++++++++.+.+ ..++|+||++||..|+.+++..... .|..+ +..+|......|.+...+...
T Consensus 94 ~~~~~~la~~l~~~~~~~~~-------~v~~~~gGseA~~~al~~~~~~~~~-~g~~~-~~~vi~~~~~yhg~~~~~~~~ 164 (460)
T 3gju_A 94 TEASITLAKMIIDRAPKGMS-------RVYFGLSGSDANETNIKLIWYYNNV-LGRPE-KKKIISRWRGYHGSGVMTGSL 164 (460)
T ss_dssp CHHHHHHHHHHHHHSCTTEE-------EEEEESSHHHHHHHHHHHHHHHHHH-TTCTT-CCEEEEETTCCCCSSHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCcC-------EEEEeCchHHHHHHHHHHHHHHHHh-cCCCC-CCEEEEECCCcCCCCHHHhhc
Confidence 45666778889998765443 6899999999999999998864321 11111 233444444555554444444
Q ss_pred cCC---------CCCCeEEEecCCC---CCcccC--------HHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---
Q 038818 192 AGI---------DPKNFRAIKTTKS---SSFTLT--------PESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP--- 248 (486)
Q Consensus 192 ~G~---------g~~~v~~v~~d~~---~~~~~d--------~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp--- 248 (486)
.|. ....+..+|.... .+..++ +++|+++|++.. ...+.+|+++...+++|.+-|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~--~~~~aaii~ep~~~~~G~~~~~~~ 242 (460)
T 3gju_A 165 TGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEG--PETIAAFIGEPILGTGGIVPPPAG 242 (460)
T ss_dssp CCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTSBCCCTT
T ss_pred cCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCCccCCHH
Confidence 332 1124566664320 011223 688999887521 123557777777777888666
Q ss_pred -chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCC--
Q 038818 249 -LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTN-- 324 (486)
Q Consensus 249 -l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~-- 324 (486)
+++|+++|++||++|++|++|.++......+.....++ ..|.++++ |.+++. .+.|.++.+++ .. +.+...
T Consensus 243 ~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~-~pdi~t~s--K~l~gG~~~lg~v~~~~~-i~-~~~~~~~~ 317 (460)
T 3gju_A 243 YWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGI-KPDLITIA--KGLTSAYAPLSGVIVADR-VW-QVLVQGSD 317 (460)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTC-CCSEEEEC--GGGTTTSSCCEEEEEEHH-HH-HHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCC-CCCeeeee--hhhcCCCCCeEEEEECHH-HH-HHHhcccc
Confidence 99999999999999999999986532211111111122 46777654 998876 47888887654 22 222100
Q ss_pred -cccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh---chHH-HHHHHHHHHHHHHHHHHHHhCCCCeEEecCC
Q 038818 325 -PEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF---GVAN-LRNFLRSHVRMAQLFQELVGGDNRFEIVAPR 399 (486)
Q Consensus 325 -~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~---g~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 399 (486)
...+.. ..+-....+.+.+++..+ ..+. +++..+....+.+.|.+.+++++.+..+ .+
T Consensus 318 ~~~~~~~----------------~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~ 380 (460)
T 3gju_A 318 KLGSLGH----------------GWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVGEV-RG 380 (460)
T ss_dssp HHCSCSC----------------CCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEE-EE
T ss_pred ccccccc----------------CCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-ee
Confidence 000000 001112334444444433 2222 2333333334445555555666655544 23
Q ss_pred CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 400 NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 400 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
...++.+.+....... ...........++.+.+.++|+++.... +..++|+++ ....++++|+++++.|++++
T Consensus 381 ~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~Gv~v~~~~---~~~~iRi~~-~~~~t~e~i~~~l~~l~~~l 453 (460)
T 3gju_A 381 DGMLAAVEFVADKDDR---VFFDASQKIGPQVATALAASGVIGRAMP---QGDILGFAP-PLCLTREQADIVVSKTADAV 453 (460)
T ss_dssp ETTEEEEEECSBTTTT---BCCCGGGCHHHHHHHHHHHTTEECEECS---SSCEEEECC-CTTCCHHHHHHHHHHHHHHH
T ss_pred eeEEEEEEEccCcccc---ccccchHHHHHHHHHHHHHCCeEEecCC---CCCEEEEEC-CCCCCHHHHHHHHHHHHHHH
Confidence 3445666654321000 0000012234567788888897543322 346899987 35678889999999999999
Q ss_pred HHHhh
Q 038818 480 DGILA 484 (486)
Q Consensus 480 ~~l~~ 484 (486)
+++.+
T Consensus 454 ~~~~~ 458 (460)
T 3gju_A 454 KSVFA 458 (460)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 87653
No 211
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.77 E-value=2.8e-16 Score=160.21 Aligned_cols=331 Identities=11% Similarity=0.044 Sum_probs=178.1
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCC-chHHHHHH
Q 038818 111 ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQT-HSALQKAA 189 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~-H~s~~~a~ 189 (486)
......++.++++++++...+ ..++|+|||+|+..|+.+++...... |.. .+..|++...+ |.+...+.
T Consensus 85 ~~~~~~~la~~l~~~~~~~~~-------~v~~~~sGseA~~~al~~~~~~~~~~-G~~--~~~~vi~~~~~yhg~~~~~~ 154 (448)
T 3dod_A 85 TNVPATQLAETLIDISPKKLT-------RVFYSDSGAEAMEIALKMAFQYWKNI-GKP--EKQKFIAMKNGYHGDTIGAV 154 (448)
T ss_dssp EEHHHHHHHHHHHHHSCTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCT--TCCEEEEEC-----------
T ss_pred CCHHHHHHHHHHHHhCCCCCC-------EEEEeCchHHHHHHHHHHHHHHHHhh-CCC--CCCEEEEECCCCCCccHHHH
Confidence 345666788999999865433 68999999999999999998753221 100 13455555444 43333333
Q ss_pred HHcCCC---------CCCeEEEecCCCCCccc-----------CHHHHHHHHHHHHHCCCccEEEEeecCC-ccccccCC
Q 038818 190 QIAGID---------PKNFRAIKTTKSSSFTL-----------TPESLQAAIDLDIQAGLIPLFLCATVGT-TAITTVDP 248 (486)
Q Consensus 190 ~~~G~g---------~~~v~~v~~d~~~~~~~-----------d~~~L~~~l~~~~~~g~~p~~vv~~~gt-t~~G~idp 248 (486)
...|.. ...+..+|.+. .++. |+++|+++|+... ..+.+|+++... ++.|.+-|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~a~vi~ep~~~~~~G~~~~ 229 (448)
T 3dod_A 155 SVGSIELFHHVYGPLMFESYKAPIPY--VYRSESGDPDECRDQCLRELAQLLEEHH---EEIAALSIESMVQGASGMIVM 229 (448)
T ss_dssp ------------------CEEECCCC--CTTSSSCCHHHHHHHHHHHHHHHHHHHG---GGEEEEEEESSEESTTTCEEC
T ss_pred HhcCCccccccccCCCCCceEeCCCc--cccCCccchhhhhHHHHHHHHHHHHhCC---CCEEEEEEeCcccCCCCeecC
Confidence 332211 11345555532 2332 5899999998422 124566666666 77887765
Q ss_pred ----chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCC-cceEEEeeCchHHHHHhcC
Q 038818 249 ----LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTL-DCCCLWVKNPNALIKALST 323 (486)
Q Consensus 249 ----l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~~~~~~~~~~~~~ 323 (486)
+++|+++|++||++|++|++|.++......+.....++ ..|.+++ .|.+++++ +.|+++.+++ . .+.+..
T Consensus 230 ~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~-~~di~t~--sK~l~~G~~~ig~v~~~~~-~-~~~~~~ 304 (448)
T 3dod_A 230 PEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENV-QPDLMAA--GKGITGGYLPIAVTFATED-I-YKAFYD 304 (448)
T ss_dssp CTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEE--CGGGGTTSSCCEEEEEEHH-H-HHTTCS
T ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCC-CCCEEEe--cccccCCcCceEEEEECHH-H-HHHhhh
Confidence 99999999999999999999986432211111111122 3566665 49998774 7888887654 2 222321
Q ss_pred CcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEecCCC
Q 038818 324 NPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVG---GDNRFEIVAPRN 400 (486)
Q Consensus 324 ~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~---~~~~~~~~~~~~ 400 (486)
. +..... .....+-....+.+.+++..+..-.-+++.++..++.+++++.|. .+|.+..+ .+.
T Consensus 305 ~--~~~~~~-----------~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~-~~~ 370 (448)
T 3dod_A 305 D--YENLKT-----------FFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQDLHALPHVGDI-RQL 370 (448)
T ss_dssp C--GGGCCC-----------CCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEEE-EEE
T ss_pred c--cccCCc-----------ccccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcCCCeEEE-Eee
Confidence 0 000000 000011122334444444433110012344555555555555554 44444332 223
Q ss_pred eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 401 FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 401 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
..++.+.+....... . ..........++.+.+.++|+++ .+. + .++|+++ +...++++|+++++.|+++++
T Consensus 371 g~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~l~~~Gv~~-~~~---~-~~iRi~~-~~~~t~e~i~~~l~~l~~~l~ 441 (448)
T 3dod_A 371 GFMCGAELVRSKETK-E--PYPADRRIGYKVSLKMRELGMLT-RPL---G-DVIAFLP-PLASTAEELSEMVAIMKQAIH 441 (448)
T ss_dssp TTEEEEEECSBTTTT-B--CCCGGGCHHHHHHHHHHHTTEEC-CEE---T-TEEEECC-CTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEccCcccc-c--ccchhhHHHHHHHHHHHHCCcEE-ecc---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHH
Confidence 345566554321000 0 00000011346777788888753 332 2 6899987 467788899999999999998
Q ss_pred HHhh
Q 038818 481 GILA 484 (486)
Q Consensus 481 ~l~~ 484 (486)
++..
T Consensus 442 ~~~~ 445 (448)
T 3dod_A 442 EVTS 445 (448)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 7753
No 212
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.77 E-value=2.6e-16 Score=160.86 Aligned_cols=329 Identities=12% Similarity=0.050 Sum_probs=185.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH
Q 038818 111 ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ 190 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 190 (486)
......++.++++++++.+.+ ..++++||++||..|+.+++...... |..+ ++.+|......|....-+..
T Consensus 92 ~~~~~~~la~~l~~~~~~~~~-------~v~~~~ggseA~~~al~~~~~~~~~~-g~~~-~~~vi~~~~~yhg~~~~~~~ 162 (459)
T 4a6r_A 92 THPAVVELSSLLAEVTPAGFD-------RVFYTNSGSESVDTMIRMVRRYWDVQ-GKPE-KKTLIGRWNGYHGSTIGGAS 162 (459)
T ss_dssp CCHHHHHHHHHHHHHSCTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCTT-CCEEEEETTCCCCSSHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCC-------EEEEeCchHHHHHHHHHHHHHHHHhc-CCCC-CCEEEEECCCcCCccHHHHh
Confidence 345667788999999876544 68999999999999999998753221 1110 23344444445544433333
Q ss_pred HcCCC---------CCCeEEEecCC--C-CCcccC--------HHHHHHHHHHHHHCCCccEEEEeecCCccccccCC--
Q 038818 191 IAGID---------PKNFRAIKTTK--S-SSFTLT--------PESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP-- 248 (486)
Q Consensus 191 ~~G~g---------~~~v~~v~~d~--~-~~~~~d--------~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp-- 248 (486)
..|.. ...+..++... . .++ +| +++|+++|++.. ...+.+|+++...++.|.+.|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~--~~~~~~vi~ep~~~~~G~~~~~~ 239 (459)
T 4a6r_A 163 LGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIG--ADKVAAFVGEPIQGAGGVIVPPA 239 (459)
T ss_dssp HSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTCBCCCT
T ss_pred hcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcC--CCCEEEEEECCccCCCCcccCCH
Confidence 33321 11345555321 0 112 45 788999887531 112456777777777788877
Q ss_pred --chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCc
Q 038818 249 --LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNP 325 (486)
Q Consensus 249 --l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~ 325 (486)
+++|+++|++||++|++|++|.++......+.....++ ..|.++++ |.++++ .+.|.++.+++ ... .+....
T Consensus 240 ~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~-~pdi~t~s--K~l~gg~~~lg~v~~~~~-i~~-~~~~~~ 314 (459)
T 4a6r_A 240 TYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGF-QPDLFTAA--KGLSSGYLPIGAVFVGKR-VAE-GLIAGG 314 (459)
T ss_dssp THHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEEC--GGGGTTSSCCEEEEECHH-HHH-HHHHHC
T ss_pred HHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCC-CCCeeehh--hhhcCCCCCccceeeCHH-HHH-HhhcCC
Confidence 99999999999999999999976432211111111122 46777764 988766 57888887544 322 221000
Q ss_pred ccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHH-HHHHHHH----HHHhCCCCeEEecCCC
Q 038818 326 EFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHV-RMAQLFQ----ELVGGDNRFEIVAPRN 400 (486)
Q Consensus 326 ~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~-~~a~~l~----~~L~~~~~~~~~~~~~ 400 (486)
.+... .+-....+.+.+++..+..-.-+++.++.. ++.++++ +.|.+++.+..+ ++.
T Consensus 315 ~~~~~-----------------~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~ 376 (459)
T 4a6r_A 315 DFNHG-----------------FTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFEHVDDV-RGV 376 (459)
T ss_dssp TTHHH-----------------HHHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEE-EEE
T ss_pred CcccC-----------------CCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EEE
Confidence 00000 000112344444444332100122334444 4444444 444556655544 233
Q ss_pred eeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 401 FAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 401 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
..++.+.+....... . ..........++.+.+.++|+++... + .++|+++ +...++++++++++.|+++++
T Consensus 377 g~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~l~~~Gv~v~~~----g-~~iRi~~-~~~~t~e~i~~~l~~l~~~l~ 447 (459)
T 4a6r_A 377 GMVQAFTLVKNKAKR-E--LFPDFGEIGTLCRDIFFRNNLIMRAC----G-DHIVSAP-PLVMTRAEVDEMLAVAERCLE 447 (459)
T ss_dssp TTEEEEEECSBTTTT-B--CCSSTTHHHHHHHHHHHHTTEECEEE----T-TEEEECC-CTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEecCcccc-c--cccchHHHHHHHHHHHHHCCeEEecC----C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHH
Confidence 445666654321000 0 00001233556778888889754332 2 6899987 457788899999999999887
Q ss_pred HHh
Q 038818 481 GIL 483 (486)
Q Consensus 481 ~l~ 483 (486)
++.
T Consensus 448 ~~~ 450 (459)
T 4a6r_A 448 EFE 450 (459)
T ss_dssp HHH
T ss_pred HHH
Confidence 664
No 213
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.76 E-value=2e-17 Score=166.26 Aligned_cols=235 Identities=10% Similarity=0.045 Sum_probs=158.5
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEE---cCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecC-CCchHHH-----
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVI---QGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSD-QTHSALQ----- 186 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~---t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~-~~H~s~~----- 186 (486)
.++.+.+++++|.+. .++ ++|||+||..++.+... +++.|+++. ..|....
T Consensus 77 ~~Le~~lA~l~g~e~---------alv~p~~~sGt~A~~~al~all~-----------pGD~Vl~~~~~~y~~~~~~~g~ 136 (427)
T 3hvy_A 77 DSLDRVYANIFNTES---------AFVRPHFVNGTHAIGAALFGNLR-----------PNDTMMSICGMPYDTLHDIIGM 136 (427)
T ss_dssp HHHHHHHHHHHTCSE---------EEEETTCCSHHHHHHHHHHHTCC-----------TTCEEEECSSSCCGGGHHHHTC
T ss_pred HHHHHHHHHHhCCCc---------eEEeCCCCcHHHHHHHHHHHhcC-----------CCCEEEEeCCCCchhHHHHhcc
Confidence 344467899998764 356 78999999877765433 677788887 6666544
Q ss_pred ------HHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeec----CCccccccCCchHHHHHH
Q 038818 187 ------KAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATV----GTTAITTVDPLGPLCDIA 256 (486)
Q Consensus 187 ------~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~----gtt~~G~idpl~~I~~i~ 256 (486)
..++..|+ +++.+|.+ ++.+|+++|++++++. ..+.+|+++. +++++|.+.|+++|+++|
T Consensus 137 ~~~~~~~~l~~~G~---~~~~v~~~---~~~~d~e~l~~~i~~~----~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia 206 (427)
T 3hvy_A 137 DDSKKVGSLREYGV---KYKMVDLK---DGKVDINTVKEELKKD----DSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSI 206 (427)
T ss_dssp CTTCCSCCTGGGTC---EEEECCCB---TTBCCHHHHHHHHHHC----TTEEEEEEESSCCSSSSCCCCHHHHHHHHHHH
T ss_pred ccchhhhHHHHcCC---EEEEecCC---CCCcCHHHHHHHhhCC----CCCEEEEEECCCCCCCCccccHHHHHHHHHHH
Confidence 33455687 88888873 5699999999999741 1245788888 899999999999999999
Q ss_pred HH--hCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC--CcceEEEeeCchHHHHHhcC-CcccccCc
Q 038818 257 KR--YSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT--LDCCCLWVKNPNALIKALST-NPEFLRNK 331 (486)
Q Consensus 257 ~~--~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p--~~~g~~~~~~~~~~~~~~~~-~~~y~~~~ 331 (486)
++ +|++++||+||+.+........ .++|.++.++||+++++ ...|+++.+ ++...+.... ..+.+.
T Consensus 207 ~~~~~g~~livD~a~~~~~~~~~p~~------~gaDiv~~S~sK~lgg~g~~~GG~i~~~-~~li~~l~~~~~~~~~g-- 277 (427)
T 3hvy_A 207 REVNENVIVFVDNCYGEFVEEKEPTD------VGADIIAGSLIKNIGGGIATTGGYIAGK-EEYVTQATFRVTVPGIG-- 277 (427)
T ss_dssp HHHCSSSEEEEECTTCTTTSSSCGGG------GTCSEEEEETTSGGGTTTCCSCEEEEEC-HHHHHHHHHHHSCTTTG--
T ss_pred HHhCCCCEEEEECCccccccCCCCcc------cCCeEEEECCcccccccccceEEEEEEC-HHHHHHHHHHhhcCCcc--
Confidence 99 8999999999977653221111 16899999999999873 223666654 4443322110 111110
Q ss_pred cCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCee-----EEEE
Q 038818 332 ASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFA-----VVCF 406 (486)
Q Consensus 332 ~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~-----~v~f 406 (486)
...+-.+. ..|..++ |......++++..+++.++++.|+++ ++++. +.... +++|
T Consensus 278 --------------~~~~~~~~--~a~~~~~--gl~~~~~r~~~~~~~a~~la~~L~~~-g~~V~-p~~~~~~~~li~~~ 337 (427)
T 3hvy_A 278 --------------GECGSTFG--VMRSLYE--GLFMAPHVTIEAVKGAVFCARIMELA-GFDVL-PKYNDKRTDIIQAI 337 (427)
T ss_dssp --------------GGCCCCTT--CHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEE-SCTTSCCSSSEEEE
T ss_pred --------------cccCCCHH--HHHHHHH--hHhHHHHHHHHHHHHHHHHHHHHHhC-CCeec-CCCCCCCceEEEEE
Confidence 01111111 1344444 33555678889999999999999998 57774 32333 7777
Q ss_pred Eee
Q 038818 407 RVL 409 (486)
Q Consensus 407 ~~~ 409 (486)
.+.
T Consensus 338 ~l~ 340 (427)
T 3hvy_A 338 KFN 340 (427)
T ss_dssp ECS
T ss_pred eCC
Confidence 775
No 214
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.76 E-value=2.8e-16 Score=160.25 Aligned_cols=342 Identities=14% Similarity=0.089 Sum_probs=189.6
Q ss_pred HHHHHHHHHHhhcCCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHc
Q 038818 86 IAGFLGEMLSSGFNVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEI 165 (486)
Q Consensus 86 ~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~ 165 (486)
.|. +.+.+...+.... .+.......+...++.++++++++.+.. ...+||+|||+||..|+.+++...
T Consensus 79 ~p~-v~~A~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~~~~~~------~~v~~~~sGseA~~~Alk~a~~~~---- 146 (451)
T 3oks_A 79 APK-VVEAVRSQVGDFT-HTCFMVTPYEGYVAVCEQLNRLTPVRGD------KRSALFNSGSEAVENAVKIARSHT---- 146 (451)
T ss_dssp CHH-HHHHHHHHHTTCS-CCTTTTSCCHHHHHHHHHHHHHSSCCSS------EEEEEESSHHHHHHHHHHHHHHHH----
T ss_pred CHH-HHHHHHHHHHhcc-cccCCccCCHHHHHHHHHHHHhCCcCCC------CEEEEeCcHHHHHHHHHHHHHHhc----
Confidence 444 3444444443322 2222223345666788999999864321 268999999999999999888642
Q ss_pred cccCCC-CeEEEecCCCchHHHHHHHHcCCC----------CCCeEEEecCCC--------CC---cccCHHHHHHHHHH
Q 038818 166 GRENIS-RLVVYGSDQTHSALQKAAQIAGID----------PKNFRAIKTTKS--------SS---FTLTPESLQAAIDL 223 (486)
Q Consensus 166 ~~~~~~-~~~v~~s~~~H~s~~~a~~~~G~g----------~~~v~~v~~d~~--------~~---~~~d~~~L~~~l~~ 223 (486)
+ +.+|......|-...-+....|-. ...+..+|.... +. ..-+++.++++|++
T Consensus 147 -----g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~ 221 (451)
T 3oks_A 147 -----HKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDK 221 (451)
T ss_dssp -----CCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHH
T ss_pred -----CCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHh
Confidence 3 334444445554444443332210 114667776410 00 01235555566654
Q ss_pred HHHCCCccEEEEeecCCccccccCC----chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccc
Q 038818 224 DIQAGLIPLFLCATVGTTAITTVDP----LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKW 299 (486)
Q Consensus 224 ~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~ 299 (486)
.. ....+.+|+++...+..|.+-| +++|+++|++||++|++|++|.++......+.....++ ..|.+++ .|.
T Consensus 222 ~~-~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~-~pdi~t~--sK~ 297 (451)
T 3oks_A 222 QI-GADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGI-DPDLIVT--AKG 297 (451)
T ss_dssp HT-CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEE--CGG
T ss_pred hc-CCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCC-CCCeeee--hhh
Confidence 32 1123556666666666677766 99999999999999999999976432211111111122 4566655 599
Q ss_pred cCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHH
Q 038818 300 FFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRM 379 (486)
Q Consensus 300 l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~ 379 (486)
++.+...|.++.+++ .. +.+.. .. ...+-....+.+.+++..+..-.-+++.++..++
T Consensus 298 l~~G~~iG~v~~~~~-~~-~~~~~---~~-----------------~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~ 355 (451)
T 3oks_A 298 IAGGLPLSAVTGRAE-IM-DSPHV---SG-----------------LGGTYGGNPIACAAALATIETIESEGLVARAQQI 355 (451)
T ss_dssp GGTTSSCEEEEEEHH-HH-TCSCT---TS-----------------BCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred hhCCcceEEEEECHH-HH-hhhcC---CC-----------------cCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 988778898877543 22 11110 00 0011122344444444443210012345555555
Q ss_pred HHHHHHHHh----CCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEE
Q 038818 380 AQLFQELVG----GDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIR 455 (486)
Q Consensus 380 a~~l~~~L~----~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR 455 (486)
.+++++.|. +++.+..+ .+...++.+.+..... .........++.+.+.++|+++..... ...++|
T Consensus 356 ~~~l~~~L~~~~~~~~~~~~~-~~~G~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iR 425 (451)
T 3oks_A 356 EKIMKDRLGRLQAEDDRIGDV-RGRGAMIAMELVKAGT-------TEPDADLTKALCAGAHAAGVIVLSCGT--YGNVVR 425 (451)
T ss_dssp HHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEEBSTTS-------CCBCHHHHHHHHHHHHHTTEECEEECT--TSCEEE
T ss_pred HHHHHHHHHHHHhhCCCeEEE-EEeeEEEEEEEecCcc-------CCCCHHHHHHHHHHHHhCCcEEecCCC--CCCEEE
Confidence 666655554 45555433 2233466666543110 000134456788888889976444322 135799
Q ss_pred EEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 456 FAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 456 ~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
+++ +...++++|+++++.|++++++
T Consensus 426 i~~-~~~~t~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 426 FLP-PLSIGDDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp ECC-CTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEC-CCCCCHHHHHHHHHHHHHHHhh
Confidence 987 4567888999999999988753
No 215
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.75 E-value=4.2e-16 Score=159.00 Aligned_cols=325 Identities=12% Similarity=0.031 Sum_probs=179.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH
Q 038818 111 ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ 190 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 190 (486)
..+...++.++++++++.+.. ...+||+|||+||..|+.+++... + ++.+|......|-....+..
T Consensus 105 ~~~~~~~la~~l~~~~~~~~~------~~v~~~~sGseA~~~alk~a~~~~-------g-~~~ii~~~~~yhg~~~~~~~ 170 (453)
T 4ffc_A 105 PYEQYVQVAELLNALTPGDHD------KRTALFNSGAEAVENAIKVARLAT-------G-RPAVVAFDNAYHGRTNLTMA 170 (453)
T ss_dssp CCHHHHHHHHHHHHHSSCSSC------EEEEEESSHHHHHHHHHHHHHHHH-------C-CCEEEEETTCCCCSSHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCC------cEEEEeCcHHHHHHHHHHHHHHhc-------C-CCEEEEEcCccCCcchHHHh
Confidence 355666788999999875421 268999999999999999887642 0 23444445555544444444
Q ss_pred HcCCC----------CCCeEEEecCCC--CCcccC-HHHHHHHHHHHHH--CCCccEEEEeecCCccccccCC----chH
Q 038818 191 IAGID----------PKNFRAIKTTKS--SSFTLT-PESLQAAIDLDIQ--AGLIPLFLCATVGTTAITTVDP----LGP 251 (486)
Q Consensus 191 ~~G~g----------~~~v~~v~~d~~--~~~~~d-~~~L~~~l~~~~~--~g~~p~~vv~~~gtt~~G~idp----l~~ 251 (486)
..|.. ...+..+|+... +.+.++ .+.++..++.-.+ ....+.+|+++...+..|.+-| +++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~ 250 (453)
T 4ffc_A 171 LTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLAT 250 (453)
T ss_dssp HCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHH
T ss_pred hcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHH
Confidence 43321 114666776410 011222 2333322221111 1123455666655555667755 999
Q ss_pred HHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCc
Q 038818 252 LCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNK 331 (486)
Q Consensus 252 I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~ 331 (486)
|+++|++||++|++|++|.++......+.....++ ..|.+++ .|.++.....|.++.+++ .. +.+.. ...
T Consensus 251 l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~-~pdi~t~--sK~~~~G~~~G~~~~~~~-i~-~~~~~---~~~-- 320 (453)
T 4ffc_A 251 LTAWASENGVVFIADEVQTGFARTGAWFASEHEGI-VPDIVTM--AKGIAGGMPLSAVTGRAE-LM-DAVYA---GGL-- 320 (453)
T ss_dssp HHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEE--CGGGGTTSSCEEEEEEHH-HH-TTSCT---TSS--
T ss_pred HHHHHHHcCCEEEEecCccCCCcccccchhhhcCC-CcchHhh--hhhhcCCcCeEEEEECHH-HH-hhhcc---cCc--
Confidence 99999999999999999976532211111111122 4566665 499987778898877543 22 11110 000
Q ss_pred cCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEecCCCeeEEEEE
Q 038818 332 ASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELV----GGDNRFEIVAPRNFAVVCFR 407 (486)
Q Consensus 332 ~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L----~~~~~~~~~~~~~~~~v~f~ 407 (486)
..+-....+.+.+++..+..-.-+++.++..++.+++++.| .++|.+..+ .....++.+.
T Consensus 321 ---------------~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~ 384 (453)
T 4ffc_A 321 ---------------GGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGEV-RGRGAMLAIE 384 (453)
T ss_dssp ---------------CCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEE-EEETTEEEEE
T ss_pred ---------------CCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEE-EeeceEEEEE
Confidence 01111234444444443321111234455555555555555 445555433 2233456665
Q ss_pred eecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhhc
Q 038818 408 VLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILAT 485 (486)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~~ 485 (486)
+..... .........++.+.+.++|+++..... ...++|+++ +...++++|+++++.|+++++++.++
T Consensus 385 ~~~~~~-------~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~~~~~ 452 (453)
T 4ffc_A 385 IVKPGT-------LEPDAALTKSIAAEALSQGVLILTCGT--FGNVIRLLP-PLVIGDDLLDEGITALSDIIRAKASH 452 (453)
T ss_dssp EBCTTS-------CCBCHHHHHHHHHHHHHTTEECCEECT--TSCEEEECC-CTTCCHHHHHHHHHHHHHHHHHHC--
T ss_pred EecCcc-------cCCCHHHHHHHHHHHHhCCCEEecCCC--CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 543110 001134456788888888975433321 135799987 45678889999999999999887643
No 216
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.75 E-value=2.2e-16 Score=160.99 Aligned_cols=317 Identities=10% Similarity=-0.011 Sum_probs=180.8
Q ss_pred HHHHHHHHHHHHHHcC-CCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHH---ccccCCCCeEEEecCC-CchHHH
Q 038818 112 TELENIVMDWLGEMLK-LPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNE---IGRENISRLVVYGSDQ-THSALQ 186 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g-~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~---~~~~~~~~~~v~~s~~-~H~s~~ 186 (486)
.+...++.+.++++++ .+.+ ..++++|||+||..|+.+++.....+ .+..+.++..|++... .|.+..
T Consensus 100 ~~~~~~la~~la~~~~~~~~~-------~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~ 172 (449)
T 2cjg_A 100 SVAMARFVETFARVLGDPALP-------HLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSG 172 (449)
T ss_dssp CHHHHHHHHHHHHHHCCTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSST
T ss_pred CHHHHHHHHHHHHhcCCCCCC-------EEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCccc
Confidence 3444566677888876 2222 68999999999999998877432111 0000111445555554 443322
Q ss_pred HHHHH--------cCCC--CCCeEEEecCC--CCC------cccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC
Q 038818 187 KAAQI--------AGID--PKNFRAIKTTK--SSS------FTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP 248 (486)
Q Consensus 187 ~a~~~--------~G~g--~~~v~~v~~d~--~~~------~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp 248 (486)
.+... .+.. ...++.+|.+. ... ...++++|+++|++. +..+.+|+++..++++|.+-|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~---~~~~~~vi~ep~~~~~G~~~~ 249 (449)
T 2cjg_A 173 YTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETR---PHDIACFVAEPIQGEGGDRHF 249 (449)
T ss_dssp TGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHS---TTTEEEEEECSEETTTTCEEC
T ss_pred chhhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhc---CCceEEEEEeCcCCCCCCccC
Confidence 21111 2221 12566677642 110 135677798888642 123456777776788897777
Q ss_pred ----chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCC
Q 038818 249 ----LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTN 324 (486)
Q Consensus 249 ----l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~ 324 (486)
+++|+++|++||+++++|++|.++......+.....++ ..|.+++ .|++ | +|+++.+++ ... .+ .
T Consensus 250 ~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~-~~di~t~--sK~l--~--iG~~~~~~~-~~~-~l--~ 318 (449)
T 2cjg_A 250 RPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDV-APDIVAF--GKKT--Q--VCGVMAGRR-VDE-VA--D 318 (449)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEE--CGGG--S--SEEEEECGG-GGG-ST--T
T ss_pred CHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCC-CceEEEe--cCcc--c--EEEEEECHH-Hhh-hh--h
Confidence 99999999999999999999986432111111111122 4677765 4988 4 788887653 221 11 0
Q ss_pred cccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhC----CCC-eEEecCC
Q 038818 325 PEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGG----DNR-FEIVAPR 399 (486)
Q Consensus 325 ~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~-~~~~~~~ 399 (486)
+.+.... .. ..+-....+.+.+++..+..-.-+++.++..++.+++++.|++ .|. +..+ ++
T Consensus 319 ~~~~~~~---------~~----~~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~-~~ 384 (449)
T 2cjg_A 319 NVFAVPS---------RL----NSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDP-RG 384 (449)
T ss_dssp CTTTSTT---------SS----CCSSSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEE-EE
T ss_pred hcccCCc---------cc----ccCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE-ee
Confidence 0011000 00 0011123344444333331100134567777888888888865 354 5433 23
Q ss_pred CeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 038818 400 NFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKL 479 (486)
Q Consensus 400 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~ 479 (486)
...++.+.+.. .....++.+.|.++|+++... +..++|+++ +..+++++|+++++.|++++
T Consensus 385 ~g~~~~~~~~~--------------~~~~~~~~~~l~~~Gv~v~~~----g~~~iRi~~-~~~~t~e~i~~~l~~l~~~l 445 (449)
T 2cjg_A 385 RGLMCAFSLPT--------------TADRDELIRQLWQRAVIVLPA----GADTVRFRP-PLTVSTAEIDAAIAAVRSAL 445 (449)
T ss_dssp ETTEEEEECSS--------------HHHHHHHHHHHHHTTEECEEE----TTTEEEECC-CTTCCHHHHHHHHHHHHHHH
T ss_pred ccEEEEEEECC--------------hHHHHHHHHHHHHCCeEEecC----CCCEEEEEC-CCCCCHHHHHHHHHHHHHHH
Confidence 34566665532 122456777787888754332 346899987 46778999999999999988
Q ss_pred HHH
Q 038818 480 DGI 482 (486)
Q Consensus 480 ~~l 482 (486)
+++
T Consensus 446 ~~~ 448 (449)
T 2cjg_A 446 PVV 448 (449)
T ss_dssp HHH
T ss_pred HHh
Confidence 765
No 217
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.74 E-value=6.3e-17 Score=163.99 Aligned_cols=310 Identities=12% Similarity=0.016 Sum_probs=177.8
Q ss_pred HHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcC
Q 038818 114 LENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAG 193 (486)
Q Consensus 114 le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G 193 (486)
...++.+.+++.++ ..+ ..++++|||+||..|+.+++... . ++.+|+.....|.+...++...|
T Consensus 94 ~~~~l~~~la~~~~-~~~-------~v~~~~~Gsea~~~ai~~a~~~~--~------~~~vi~~~~~yhg~~~~~~~~~g 157 (429)
T 3k28_A 94 IENKLAKLVIERVP-SIE-------IVRMVNSGTEATMSALRLARGYT--G------RNKILKFIGCYHGHGDSLLIKAG 157 (429)
T ss_dssp HHHHHHHHHHHHST-TCS-------EEEEESSHHHHHHHHHHHHHHHH--T------CCEEEEEETCCCCSCGGGCSSCC
T ss_pred HHHHHHHHHHHhCC-CCC-------EEEEeCChHHHHHHHHHHHHHhh--C------CCEEEEECCCcCCCcHHHHHhcC
Confidence 44455677888775 222 68999999999999999887641 0 23444445555544333322223
Q ss_pred CCCC----------------CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHH
Q 038818 194 IDPK----------------NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLC 253 (486)
Q Consensus 194 ~g~~----------------~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~ 253 (486)
.+.. .++.+|. -|+++|++++++... .+.+|+++...+++|.+.| +++|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~---~~~~vi~ep~~~~~G~~~~~~~~l~~l~ 227 (429)
T 3k28_A 158 SGVATLGLPDSPGVPEGVAKNTITVAY-------NDLESVKYAFEQFGD---DIACVIVEPVAGNMGVVPPQPGFLEGLR 227 (429)
T ss_dssp TTC-----CCCTTCCHHHHTTEEEEET-------TCHHHHHHHHHHHGG---GEEEEEECSSBCTTSCBCCCTTHHHHHH
T ss_pred CcccccCCCCcCCCCCcccCceeecCC-------CCHHHHHHHHHhCCC---CEEEEEEcCCCCCCCcccCCHHHHHHHH
Confidence 2100 1222222 189999999986421 2456777777777888888 99999
Q ss_pred HHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccC
Q 038818 254 DIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKAS 333 (486)
Q Consensus 254 ~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~ 333 (486)
++|++||+++|+|++|.++ ...........++ ..|.+++ .|.++++.++|+++.+++ .. +.+.......
T Consensus 228 ~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~-~~di~t~--sK~~~~G~~iG~~~~~~~-~~-~~~~~~~~~~----- 296 (429)
T 3k28_A 228 EVTEQNGALLIFDEVMTGF-RVAYNCGQGYYGV-TPDLTCL--GKVIGGGLPVGAYGGKAE-IM-RQVAPSGPIY----- 296 (429)
T ss_dssp HHHHHHTCEEEEECTTTTT-TSSTTHHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECHH-HH-TTBTTTSSBC-----
T ss_pred HHHHHcCCEEEEecccccc-ccCcchHHHHhCC-CCceehh--hhhhcCCCCeEEEEEcHH-HH-hhhccCCCcc-----
Confidence 9999999999999999765 2211111111122 3566654 599887778898877543 32 2221100000
Q ss_pred CCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC----CCeEEecCCCeeEEEEEee
Q 038818 334 DSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGD----NRFEIVAPRNFAVVCFRVL 409 (486)
Q Consensus 334 ~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~~~ 409 (486)
...+.....+.+.+++..+.... +++.++..++.+++++.|+++ +.+..+ +....++.|.+.
T Consensus 297 ------------~~~t~~~~~~a~aaa~aal~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~~~~~ 362 (429)
T 3k28_A 297 ------------QAGTLSGNPLAMAAGYETLVQLT-PESYVEFERKAEMLEAGLRKAAEKHGIPHHI-NRAGSMIGIFFT 362 (429)
T ss_dssp ------------CCCTTTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEE-EEETTEEEEESS
T ss_pred ------------ccCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEE-EeeccEEEEEEe
Confidence 00111223455455444432111 566777777788887777653 322222 223345566554
Q ss_pred cCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 410 PSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
......-. ...........++.+.+.++|++ +.+. +...+|++ ...++++++++++.|+++++++
T Consensus 363 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~Gv~-v~~~---~~~~~r~~---~~~t~e~i~~~l~~l~~~l~~~ 427 (429)
T 3k28_A 363 DEPVINYD-AAKSSNLQFFAAYYREMVEQGVF-LPPS---QFEGLFLS---TVHSDADIEATIAAAEIAMSKL 427 (429)
T ss_dssp SSCCCSHH-HHTTSCHHHHHHHHHHHHHTTEE-CCSS---TTSCBCCC---TTCCHHHHHHHHHHHHHHHHTC
T ss_pred cCCccccc-ccccccHHHHHHHHHHHHHCCeE-EecC---CCCCEEEE---CCCCHHHHHHHHHHHHHHHHHH
Confidence 22100000 00000023446777888888874 3332 23457764 4668889999999999998765
No 218
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.74 E-value=1.1e-16 Score=162.22 Aligned_cols=310 Identities=10% Similarity=-0.009 Sum_probs=174.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH
Q 038818 111 ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ 190 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 190 (486)
......++.+++++.++ ..+ ..++++|||+|+..|+..++... + ++.+|+.....|.....+..
T Consensus 90 ~~~~~~~la~~l~~~~~-~~~-------~v~~~~ggsea~~~al~~a~~~~-------~-~~~vi~~~~~yhg~~~~~~~ 153 (427)
T 3fq8_A 90 PCALENVLAEMVNDAVP-SIE-------MVRFVNSGTEACMAVLRIMRAYT-------G-RDKIIKFEGCYHGHADMFLV 153 (427)
T ss_dssp CCHHHHHHHHHHHHHST-TCS-------EEEEESSHHHHHHHHHHHHHHHH-------C-CCEEEEEETCCCCSCGGGCS
T ss_pred CCHHHHHHHHHHHHhCC-CCC-------EEEEeCCHHHHHHHHHHHHHHhh-------C-CCEEEEECCCcCCCCHHHHH
Confidence 34566778899999987 333 68999999999999998877541 0 23444444444533221111
Q ss_pred HcCC-------CC---------CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----ch
Q 038818 191 IAGI-------DP---------KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LG 250 (486)
Q Consensus 191 ~~G~-------g~---------~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~ 250 (486)
..|. .. ..+..+|.+ |+++|++++++.. ..+.+|+++...+++|.+.| ++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------d~~~le~~l~~~~---~~~~~vi~~p~~~~~G~~~~~~~~l~ 223 (427)
T 3fq8_A 154 KAGSGVATLGLPSSPGVPKKTTANTLTTPYN-------DLEAVKALFAENP---GEIAGVILEPIVGNSGFIVPDAGFLE 223 (427)
T ss_dssp SCCTHHHHHTCCSCSSSCHHHHTTEEEEETT-------CHHHHHHHHHHST---TTEEEEEECSSBCTTSCBCCCTTHHH
T ss_pred hcCCcccccCCCCCCCCCCcccCceeecCCC-------CHHHHHHHHHhCC---CCEEEEEEcCCcCCCCCcCCCHHHHH
Confidence 1111 00 024444432 8999999997631 23567888888888899988 99
Q ss_pred HHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccC
Q 038818 251 PLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRN 330 (486)
Q Consensus 251 ~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~ 330 (486)
+|.++|++||+++++|++|+++ .....+.....++ ..|.++++ |.+++...+|+++.++ +.. +.+.....+..
T Consensus 224 ~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~-~~di~t~s--K~~~~G~~~G~~~~~~-~~~-~~~~~~~~~~~- 296 (427)
T 3fq8_A 224 GLREITLEHDALLVFDEVITGF-RIAYGGVQEKFGV-TPDLTTLG--KIIGGGLPVGAYGGKR-EIM-QLVAPAGPMYQ- 296 (427)
T ss_dssp HHHHHHHHTTCEEEEECTTTBT-TTBTTHHHHHTTC-CCSEEEEC--GGGGTTSSCEEEEECH-HHH-TTBTTTSSBCC-
T ss_pred HHHHHHHHcCCEEEEecccccc-ccCcchhhHhcCC-CCChhhhh--hhhhCCcceEEEEEcH-HHH-HhhccCCCccc-
Confidence 9999999999999999999865 2211111111122 35666665 9998666788887643 332 22211100100
Q ss_pred ccCCCCCccCCCCccccCCCCCCchHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHhCCC---CeEEecCCCeeEE
Q 038818 331 KASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF---GVANLRNFLRSHVRMAQLFQELVGGDN---RFEIVAPRNFAVV 404 (486)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~v 404 (486)
..+-....+.+.+++..+ .. +++.++..++.+++++.|+++. ++....+....++
T Consensus 297 ----------------~~t~~~~~~~~aa~~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~ 357 (427)
T 3fq8_A 297 ----------------AGTLSGNPLAMTAGIKTLELLRQ---PGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMF 357 (427)
T ss_dssp ----------------CCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEE
T ss_pred ----------------cCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeeEE
Confidence 011112334444444333 22 3445666666666666665420 1211112223455
Q ss_pred EEEeecCCCCCCCCCC-ccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 405 CFRVLPSASGLGDGKA-NEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 405 ~f~~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
.|.+...... +-.. .........++.+.+.++|+++ .+.. .. |+++ +...++++++++++.|++++++
T Consensus 358 ~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~Gi~v-~~~~---~~--r~~~-~~~~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 358 GFFFTEGPVH--NYEDAKKSDLQKFSRFHRGMLEQGIYL-APSQ---FE--AGFT-SLAHTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp EEESSSCCCC--SHHHHTTSCHHHHHHHHHHHHHTTEEC-CSST---TS--CEEC-CTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCccc--cccccccccHHHHHHHHHHHHHCCcEE-ecCC---CC--CEEe-eCcCCHHHHHHHHHHHHHHHHh
Confidence 6655432100 0000 0000233456788888888743 3321 11 4554 3567888999999999998765
No 219
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.74 E-value=3.3e-17 Score=165.38 Aligned_cols=237 Identities=12% Similarity=0.016 Sum_probs=158.2
Q ss_pred HHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecC-CCchHHHHHHHH--
Q 038818 115 ENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSD-QTHSALQKAAQI-- 191 (486)
Q Consensus 115 e~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~-~~H~s~~~a~~~-- 191 (486)
..++.+++++++|.+... .-++++|||+||..++.+... +++.|+++. ..|.+....+.+
T Consensus 67 ~~~l~~~la~~~g~~~~~------~~i~~~sGt~Ai~~al~al~~-----------~Gd~Vl~~~~~~y~~~~~~~~l~g 129 (431)
T 3ht4_A 67 RDTLEKVYADVFGAEAGL------VRPQIISGTHAISTALFGILR-----------PGDELLYITGKPYDTLEEIVGVRG 129 (431)
T ss_dssp HHHHHHHHHHHTTCSEEC------CBTTSCSHHHHHHHHHHTTCC-----------TTCEEEECSSSCCTTHHHHTTSSS
T ss_pred HHHHHHHHHHHhCCCccc------ccceeeCHHHHHHHHHHHhCC-----------CCCEEEEeCCCCchhHHHHHhhcc
Confidence 566778899999987542 112245789999887765432 566777776 788888766543
Q ss_pred --------cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeec----CCccccccCCchHHHHHHHH-
Q 038818 192 --------AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATV----GTTAITTVDPLGPLCDIAKR- 258 (486)
Q Consensus 192 --------~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~----gtt~~G~idpl~~I~~i~~~- 258 (486)
.|+ +++.+|.++ ++.+|+++|+++|++. +.+|+++. +++.+|.++|+++|+++|++
T Consensus 130 ~~~~~~~~~G~---~~~~v~~~~--~~~~d~e~l~~~l~~~------tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~ 198 (431)
T 3ht4_A 130 KGVGSFKEYNI---GYNAVPLTE--GGLVDFEAVAAAIHSN------TKMIGIQRSKGYATRPSFTISQIKEMIAFVKEI 198 (431)
T ss_dssp CSSSCSGGGTC---EEEECCBCT--TSSBCHHHHHHHCCTT------EEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHH
T ss_pred cccchHHHcCC---EEEEeCCCC--CCCcCHHHHHhhcCCC------CeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhh
Confidence 677 889999875 5799999999998753 45777776 77788888999999999999
Q ss_pred -hCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCC---CCcceEEEeeCchHHHHHhc-CCcccccCccC
Q 038818 259 -YSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFT---TLDCCCLWVKNPNALIKALS-TNPEFLRNKAS 333 (486)
Q Consensus 259 -~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~---p~~~g~~~~~~~~~~~~~~~-~~~~y~~~~~~ 333 (486)
+|+++++|++|+.+....... . -++|.++.++||++++ |.| |+++.+ ++....... .....+.
T Consensus 199 ~~~~~livDea~~~~~~~~~~~-~-----~g~Di~~~S~sK~lgg~~~~~G-G~v~~~-~~li~~l~~~~~~~~~g---- 266 (431)
T 3ht4_A 199 KPDVVVFVDNCYGEFIEEQEPC-H-----VGADLMAGSLIKNPGGGIVKTG-GYIVGK-EQYVEACAYRLTSPGIG---- 266 (431)
T ss_dssp CTTCEEEEECTTCTTSSSCCGG-G-----TTCSEEEEETTSGGGTTTCSSC-EEEEEC-HHHHHHHHHHHSCTTTT----
T ss_pred CCCCEEEEeCCChhhccCCCcc-c-----cCCeEEEcCccccCCCCCCCce-EEEEec-HHHHHHHHHHhccCCcc----
Confidence 999999999998765322211 1 1689999999999775 444 766665 433332211 0111110
Q ss_pred CCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCee-----EEEEEe
Q 038818 334 DSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAPRNFA-----VVCFRV 408 (486)
Q Consensus 334 ~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~-----~v~f~~ 408 (486)
...+-.+.. .|..++ +.+.+..++++..+++.++++.|+++ ++++... ... ++.+.+
T Consensus 267 ------------~~~~~~~~~--~~~~~~--~l~~~~~~~~~~~~~a~~l~~~L~~~-g~~v~p~-~~~~~~~li~~i~l 328 (431)
T 3ht4_A 267 ------------AEAGASLYS--LQEMYQ--GFFLAPHVAGQALKGAIFTAAFLEKL-GMNTSPA-WNAPRTDLIQSVQF 328 (431)
T ss_dssp ------------TSCSCCCSC--SHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH-TCCEESC-TTSCCSSSCCEEEC
T ss_pred ------------cccCccHHH--HHHHHh--HhhhHHHHHHHHHHHHHHHHHHHHhC-cCEecCC-CCCCCccEEEEEEe
Confidence 011111111 123333 33455678888999999999999987 5666422 222 566666
Q ss_pred e
Q 038818 409 L 409 (486)
Q Consensus 409 ~ 409 (486)
.
T Consensus 329 ~ 329 (431)
T 3ht4_A 329 D 329 (431)
T ss_dssp C
T ss_pred C
Confidence 4
No 220
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.74 E-value=2.7e-16 Score=159.55 Aligned_cols=313 Identities=12% Similarity=0.025 Sum_probs=174.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEec-CCCchHHHHHHHH
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGS-DQTHSALQKAAQI 191 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s-~~~H~s~~~a~~~ 191 (486)
....++.+++++.++ ..+ ..++++|||+|+..|+.+++... ++..|++. ...|.+...+...
T Consensus 95 ~~~~~l~~~la~~~~-~~~-------~v~~~~sGsea~~~ai~~a~~~~---------~~~~vi~~~~~yhg~~~~~~~~ 157 (434)
T 3l44_A 95 ALEVKFAKMLKEAMP-ALD-------KVRFVNSGTEAVMTTIRVARAYT---------GRTKIMKFAGCYHGHSDLVLVA 157 (434)
T ss_dssp HHHHHHHHHHHHHCT-TCS-------EEEEESSHHHHHHHHHHHHHHHH---------CCCEEEEETTCCCCSSGGGGBC
T ss_pred HHHHHHHHHHHHhCC-CCC-------EEEEeCchHHHHHHHHHHHHHhh---------CCCEEEEEcCccCCCcHHHHhh
Confidence 344556677888876 333 68999999999999999887642 34444444 3444333222222
Q ss_pred cCCCC----------------CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chH
Q 038818 192 AGIDP----------------KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGP 251 (486)
Q Consensus 192 ~G~g~----------------~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~ 251 (486)
.|.+. ..+..+|. -|+++|+++|++... .+.+|+++...+++|.+.| +++
T Consensus 158 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~---~~~~vi~ep~~~~~G~~~~~~~~l~~ 227 (434)
T 3l44_A 158 AGSGPSTLGTPDSAGVPQSIAQEVITVPF-------NNVETLKEALDKWGH---EVAAILVEPIVGNFGIVEPKPGFLEK 227 (434)
T ss_dssp -------CCCBSSTTCCHHHHTTEEEECT-------TCHHHHHHHHHHHGG---GEEEEEECSSBCTTSCBCCCTTHHHH
T ss_pred cCCcccccCCCCcCCCCCcCCCceEecCc-------ccHHHHHHHHHhCCC---CEEEEEEcCCCCCCCCccCCHHHHHH
Confidence 22110 02333332 189999999986421 2456777777777888887 999
Q ss_pred HHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCc
Q 038818 252 LCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNK 331 (486)
Q Consensus 252 I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~ 331 (486)
|.++|++||++||+|++|.++ ...........++ ..|.+++ .|.++++.++|.++.++ +.. +.+.......
T Consensus 228 l~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~-~~di~t~--sK~~~~G~~iG~~~~~~-~i~-~~~~~~~~~~--- 298 (434)
T 3l44_A 228 VNELVHEAGALVIYDEVITAF-RFMYGGAQDLLGV-TPDLTAL--GKVIGGGLPIGAYGGKK-EIM-EQVAPLGPAY--- 298 (434)
T ss_dssp HHHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTC-CCSEEEE--EGGGGTTSSCEEEEECH-HHH-TTBTTTSSBC---
T ss_pred HHHHHHHcCCEEEEeccccce-eccccHHHHHcCC-CCCeeeh--hhhhcCCcCeeeEEEcH-HHH-HhhccCCCcc---
Confidence 999999999999999999875 2211111111122 3566655 59888888899886654 332 2221100000
Q ss_pred cCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhC----CCCeEEecCCCeeEEEEE
Q 038818 332 ASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGG----DNRFEIVAPRNFAVVCFR 407 (486)
Q Consensus 332 ~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~ 407 (486)
...+.....+.+.+++..+..-.-+++.++..++.+++++.|++ .+.+..+ ++..+++.+.
T Consensus 299 --------------~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~~~ 363 (434)
T 3l44_A 299 --------------QAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAKHNIDITL-NRLKGALTVY 363 (434)
T ss_dssp --------------CCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEE-EEETTEEEEE
T ss_pred --------------cCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEE-EeeccEEEEE
Confidence 00111223344444433331100034556666666666666654 3322222 2334566666
Q ss_pred eecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 408 VLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
+......... ...........++.+.|.++|++ +.+. +...+|++ ...+++|++++++.|+++++++.+
T Consensus 364 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~Gv~-v~~~---~~~~~rl~---~~~t~e~i~~~l~~l~~~l~~~~~ 432 (434)
T 3l44_A 364 FTTNTIEDYD-AAQDTDGEMFGKFFKLMLQEGVN-LAPS---KYEAWFLT---TEHTKEDIEYTIEAVGRAFAALAD 432 (434)
T ss_dssp ESSSCCCSHH-HHHHSCHHHHHHHHHHHHHTTEE-CCSS---TTCCEECC---TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCcccchh-hccccCHHHHHHHHHHHHHCCeE-Eeec---CCCcEEEe---cccCHHHHHHHHHHHHHHHHHHHh
Confidence 6432100000 00000023345677888888874 3332 22457774 466888999999999999887653
No 221
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.73 E-value=8.6e-16 Score=156.76 Aligned_cols=314 Identities=12% Similarity=0.015 Sum_probs=174.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHH
Q 038818 111 ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQ 190 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 190 (486)
..+++.++.+|++++++ ..+ ..++++||++|+..++.++|... . ++.+|+.....|.....+..
T Consensus 95 ~~~~~~~la~~l~~~~~-~~~-------~v~~~~gg~eA~~~al~~ar~~~--~------~~~vi~~~~~yhg~~~~~~~ 158 (453)
T 2cy8_A 95 SHPLEVRWAERIVAAFP-SIR-------KLRFTGSGTETTLLALRVARAFT--G------RRMILRFEGHYHGWHDFSAS 158 (453)
T ss_dssp SCHHHHHHHHHHHHHCT-TCS-------EEEEESCHHHHHHHHHHHHHHHH--C------CCEEEEECC-----------
T ss_pred CCHHHHHHHHHHHhhCC-CCC-------EEEEeCCHHHHHHHHHHHHHHhh--C------CCEEEEEcCCcCCCchhhHh
Confidence 46788899999999986 333 68999999999999999876431 0 34445444344432222211
Q ss_pred H----------cCCCC---CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHH
Q 038818 191 I----------AGIDP---KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLC 253 (486)
Q Consensus 191 ~----------~G~g~---~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~ 253 (486)
. .|+.. ..+..+|. .|+++|+++|++.. ..+.+|+++...+++|.+.| +++|.
T Consensus 159 ~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~---~~~~~vi~ep~~~~tG~~~~~~~~l~~l~ 228 (453)
T 2cy8_A 159 GYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVFANHG---SDIAAFIAEPVGSHFGVTPVSDSFLREGA 228 (453)
T ss_dssp -----------------CGGGEEEECT-------TCHHHHHHHHHHHG---GGEEEEEECSSEHHHHTEECCHHHHHHHH
T ss_pred hcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHHHhcC---CCEEEEEECCCCCCCCCcCCCHHHHHHHH
Confidence 1 23310 12333432 38999999998531 12456776666677898877 99999
Q ss_pred HHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccC
Q 038818 254 DIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKAS 333 (486)
Q Consensus 254 ~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~ 333 (486)
++|++||++|++|++|+++ ...+.+.....++ ..|.++ +.|+++++.++|+++.+++ .. +.+... . ..
T Consensus 229 ~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~s--~sK~l~~G~~~G~v~~~~~-~~-~~l~~~--~--~~-- 296 (453)
T 2cy8_A 229 ELARQYGALFILDEVISGF-RVGNHGMQALLDV-QPDLTC--LAKASAGGLPGGILGGRED-VM-GVLSRG--S--DR-- 296 (453)
T ss_dssp HHHHHTTCEEEEECTTTTT-TTCTTHHHHHHTC-CCSEEE--EEGGGGTTSSCEEEEECHH-HH-TTSSSC--C------
T ss_pred HHHHHcCCEEEEecCcccc-ccCchhhhHHhCC-CCcEEE--EChhhhCCcceEEEechHH-HH-HHhccc--c--CC--
Confidence 9999999999999999864 2221111111122 357654 5699997778899888743 22 222110 0 00
Q ss_pred CCCCccCCCCccccCCCCCCchHHHHHHHHhch-HHHHHHHHHHHHHHHHHHHHHhCC----CCeEEecCCCeeEEEEEe
Q 038818 334 DSKQVVDYKDWQITLSRRFRALKLWLVLRSFGV-ANLRNFLRSHVRMAQLFQELVGGD----NRFEIVAPRNFAVVCFRV 408 (486)
Q Consensus 334 ~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~~ 408 (486)
. . ....+-....+.+.+++..+.. - .+++.++..++++++++.|+++ +....+ ++...++.+.+
T Consensus 297 ---~---~---~~~~t~~~n~~~~aa~~aal~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~i~~ 365 (453)
T 2cy8_A 297 ---K---V---LHQGTFTGNPITAAAAIAAIDTIL-EDDVCAKINDLGQFAREAMNHLFARKGLNWLA-YGRFSGFHLMP 365 (453)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEE-ECCTTEEEEEE
T ss_pred ---C---c---eeCCCCCCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHhhCCCcEEE-EEeeeEEEEEE
Confidence 0 0 0000111233434443333321 1 2345667777888888877653 322222 34445677766
Q ss_pred ec-----CC-C-CCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 409 LP-----SA-S-GLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 409 ~~-----~~-~-~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
.. .. . ...+. .........++.+.|.++|+++ .+. + .+|+ +...++++|+++++.|++++++
T Consensus 366 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~l~~~Gv~v-~~~---~--~~~l---~~~~t~~~i~~~l~~l~~~l~~ 434 (453)
T 2cy8_A 366 GLPPNTTDTGSITRAEV--ARPDVKMIAAMRMALILEGVDI-GGR---G--SVFL---SAQHEREHVEHLVTTFDRVLDR 434 (453)
T ss_dssp TSCTTCCCCHHHHTTCS--CCCCHHHHHHHHHHHHHTTEEC-BTT---T--EEEC---CTTCCHHHHHHHHHHHHHHHHH
T ss_pred ecccccccccccccccc--ccccHHHHHHHHHHHHHCCeEE-eCC---C--CEEe---eccCCHHHHHHHHHHHHHHHHH
Confidence 53 10 0 00000 0000223456777788888743 321 2 2454 3577888999999999999877
Q ss_pred Hhh
Q 038818 482 ILA 484 (486)
Q Consensus 482 l~~ 484 (486)
+.+
T Consensus 435 ~~~ 437 (453)
T 2cy8_A 435 LAD 437 (453)
T ss_dssp HHH
T ss_pred HHh
Confidence 643
No 222
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.73 E-value=3.5e-16 Score=158.74 Aligned_cols=315 Identities=11% Similarity=0.023 Sum_probs=176.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
.....++.++++++++ ..+ ..++++|||+|+..++.++|... . ++.+|+.....|.....+...
T Consensus 95 ~~~~~~l~~~la~~~~-~~~-------~v~~~~sgseA~~~al~~ar~~~--~------~~~vi~~~~~yhg~~~~~~~~ 158 (434)
T 2epj_A 95 GEAEVLLAEKILGYVK-RGG-------MIRFVNSGTEATMTAIRLARGYT--G------RDLILKFDGCYHGSHDAVLVA 158 (434)
T ss_dssp CHHHHHHHHHHHHHHC-TTC-------EEEEESSHHHHHHHHHHHHHHHH--C------CCEEEEEETCCCCSSGGGSEE
T ss_pred CHHHHHHHHHHHHhCC-CCC-------EEEEeCCHHHHHHHHHHHHHHhh--C------CCeEEEEcCCcCCCCHHHHHh
Confidence 4556667788888884 222 68999999999999999876431 0 344454444444322211111
Q ss_pred -------------cCCC---CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chH
Q 038818 192 -------------AGID---PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGP 251 (486)
Q Consensus 192 -------------~G~g---~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~ 251 (486)
.|+. ...+..+|. .|+++|+++|++.. ..+.+|+++...+++|.+.| +++
T Consensus 159 ~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~ 228 (434)
T 2epj_A 159 AGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERVFAEYG---DRIAGVIVEPVIANAGVIPPRREFLAA 228 (434)
T ss_dssp CC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHHHHHHG---GGEEEEEECSSBCSSSCBCCCHHHHHH
T ss_pred cCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHHHHhCC---CCEEEEEEeCCcCCCCccCCCHHHHHH
Confidence 1221 013555553 28999999997631 12456777766677899888 999
Q ss_pred HHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCc
Q 038818 252 LCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNK 331 (486)
Q Consensus 252 I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~ 331 (486)
|.++|++||++|++|++|+++ ...+.+.....++ ..|.+++ +|+++....+|+++.++ +.. +.+.......
T Consensus 229 l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~s~--sK~l~~G~~~G~v~~~~-~~~-~~l~~~~~~~--- 299 (434)
T 2epj_A 229 LQRLSRESGALLILDEVVTGF-RLGLEGAQGYFNI-EGDIIVL--GKIIGGGFPVGAVAGSR-EVM-SLLTPQGKVF--- 299 (434)
T ss_dssp HHHHHHHHTCEEEEEETTTTT-TSSTTHHHHHHTC-CCSEEEE--EGGGGTTSSCEEEEECH-HHH-TTBTTTSSBC---
T ss_pred HHHHHHHcCCEEEEEcchhce-eCCcchhhHHhCC-CCCeeee--cchhcCCcceeeeeecH-HHH-HhhccCCCcc---
Confidence 999999999999999999865 2211111111122 4676544 69998766789888864 332 2221100000
Q ss_pred cCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC---CeEEecCCCeeEEEEEe
Q 038818 332 ASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDN---RFEIVAPRNFAVVCFRV 408 (486)
Q Consensus 332 ~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~v~f~~ 408 (486)
...+-....+.+.+++..+..-.-+++.++..++++++++.|+++. ++....++...++.+.+
T Consensus 300 --------------~~~t~~~~~~~~aa~~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~ 365 (434)
T 2epj_A 300 --------------NAGTFNAHPITMAAGLATLKALEEEPVYSVSREAAKALEEAASEVLDRTGLPYTINRVESMMQLFI 365 (434)
T ss_dssp --------------CCCTTTTCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEE
T ss_pred --------------cCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEE
Confidence 0001112333333333322110003456777778888888886541 23211123345666666
Q ss_pred ecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 409 LPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
.....+.-. ...........++.+.|.++|+. +.+.. ...+|++ ...+++|++++++.|+++++++.
T Consensus 366 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~Gv~-v~~~~---~~~~~~~---~~~t~e~i~~~l~~l~~~l~~~~ 432 (434)
T 2epj_A 366 GVEEVSNAA-QARKADKKFYVKLHEEMLRRGVF-IAPSN---LEAVFTG---LPHQGEALEIAVEGLRSSLKTVL 432 (434)
T ss_dssp TCSCCSSHH-HHTTSCHHHHHHHHHHHHHTTEE-CCSST---TSCEECC---TTCSHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCcccch-hccccCHHHHHHHHHHHHHCCeE-EeccC---CCcEEEe---ccCCHHHHHHHHHHHHHHHHHHh
Confidence 431000000 00000012345677788888874 33321 1234443 46788899999999999988765
No 223
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.73 E-value=6.4e-16 Score=158.36 Aligned_cols=311 Identities=11% Similarity=0.010 Sum_probs=178.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHH-cc----------------ccCC-CC
Q 038818 111 ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNE-IG----------------RENI-SR 172 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~-~~----------------~~~~-~~ 172 (486)
..++++++.+.++++++...+ ..+|++|||+||..|+.+++.....+ .+ ..|. +.
T Consensus 108 ~~~l~~~la~~l~~~~~~~~~-------~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~ 180 (472)
T 1ohv_A 108 PENFVEKLRESLLSVAPKGMS-------QLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDY 180 (472)
T ss_dssp BTTHHHHHHHTGGGGCCTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCC
T ss_pred HHHHHHHHHHHHHHhCCCCcC-------EEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCC
Confidence 356777777777777643322 68999999999999999997543210 00 0111 13
Q ss_pred eEEEecCCCchHHHHHHHHcCC--------CCCCeEEEecCCCCCc-------------ccCHHHHHHHHHHHHHCCCcc
Q 038818 173 LVVYGSDQTHSALQKAAQIAGI--------DPKNFRAIKTTKSSSF-------------TLTPESLQAAIDLDIQAGLIP 231 (486)
Q Consensus 173 ~~v~~s~~~H~s~~~a~~~~G~--------g~~~v~~v~~d~~~~~-------------~~d~~~L~~~l~~~~~~g~~p 231 (486)
.+|......|-+...+....|. +...+..+++... .+ ..|+++|+++|++....+..+
T Consensus 181 ~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 259 (472)
T 1ohv_A 181 SILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRL-KYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTV 259 (472)
T ss_dssp EEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCC-CSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred eEEEECCCcccccHHHHhcCCCccccccCCCCCCCcccCCCcc-cCccccccccchhHHHHHHHHHHHHHHhcCCCCCCE
Confidence 4444555566555555555442 1111122333210 00 237899999998643222235
Q ss_pred EEEEeecCCccccccCC----chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCC-CCCceeecccccc-CCCCc
Q 038818 232 LFLCATVGTTAITTVDP----LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIE-GADSFSLNAHKWF-FTTLD 305 (486)
Q Consensus 232 ~~vv~~~gtt~~G~idp----l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~-~aDsi~~~~hK~l-~~p~~ 305 (486)
.+|+++...+++|.+.| +++|+++|++||++||+|++|.++......+.....++. ..|.++++ |++ +
T Consensus 260 ~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~s--K~~l~---- 333 (472)
T 1ohv_A 260 AGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFS--KKMMT---- 333 (472)
T ss_dssp EEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEEEEC--GGGSS----
T ss_pred EEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEEEEc--ccccc----
Confidence 67788777888998877 999999999999999999999753211110011111221 27877765 984 3
Q ss_pred ceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHH---HHHHHhchHHHHHHHHHHHHHHHH
Q 038818 306 CCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLW---LVLRSFGVANLRNFLRSHVRMAQL 382 (486)
Q Consensus 306 ~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~---~~l~~~g~~g~~~~~~~~~~~a~~ 382 (486)
.|+++ + +.. . ...+... ..+-....+.+. .++..+-. .++.++..+++++
T Consensus 334 GG~~~-~-~~~-~---~~~~~~~------------------~~T~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~ 386 (472)
T 1ohv_A 334 GGFFH-K-EEF-R---PNAPYRI------------------FNTWLGDPSKNLLLAEVINIIKR---EDLLSNAAHAGKV 386 (472)
T ss_dssp EEEEE-C-GGG-S---CSSSSSS------------------CCSSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHH
T ss_pred CCccC-c-hhh-c---ccccccc------------------cCccCccHHHHHHHHHHHHHHHh---CCHHHHHHHHHHH
Confidence 25443 2 221 0 0000000 011112233333 33433322 2356777788888
Q ss_pred HHHHHhCC----CC-eEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEE
Q 038818 383 FQELVGGD----NR-FEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFA 457 (486)
Q Consensus 383 l~~~L~~~----~~-~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~ 457 (486)
|++.|+++ |. +..+ .+...++.|.+.. ......+.+.|.++|+.+... +..++|++
T Consensus 387 l~~~L~~l~~~~~~~v~~~-~~~g~~~~~~~~~--------------~~~~~~~~~~l~~~Gv~~~~~----g~~~iRi~ 447 (472)
T 1ohv_A 387 LLTGLLDLQARYPQFISRV-RGRGTFCSFDTPD--------------ESIRNKLISIARNKGVMLGGC----GDKSIRFR 447 (472)
T ss_dssp HHHHHHHHHHHCTTTCEEE-EEETTEEEEECSS--------------HHHHHHHHHHHHHTTEECEEE----TTTEEEEC
T ss_pred HHHHHHHHHhhCCCcEEee-cCCceEEEEEeCC--------------hhHHHHHHHHHHHCCeEEecC----CCCEEEEE
Confidence 88887653 43 3322 2233455554431 223456777888888754321 34689998
Q ss_pred ecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 458 VGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 458 ~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
+ +..++++|||++++.|+++++++
T Consensus 448 ~-~~~~t~e~i~~~~~~l~~~l~~~ 471 (472)
T 1ohv_A 448 P-TLVFRDHHAHLFLNIFSDILADF 471 (472)
T ss_dssp C-CTTCCHHHHHHHHHHHHHHHHTC
T ss_pred C-CCCCCHHHHHHHHHHHHHHHHhc
Confidence 8 46788899999999999987654
No 224
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.72 E-value=5.9e-16 Score=151.67 Aligned_cols=313 Identities=11% Similarity=0.056 Sum_probs=192.6
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcc--eEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCC--
Q 038818 105 WMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGG--GVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQ-- 180 (486)
Q Consensus 105 ~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~--~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~-- 180 (486)
|.......++|.-+++..+++||++... + -+=..+|+.||+.+..+..+ |++.|+.-+.
T Consensus 92 YgGce~vD~iE~la~~rak~lF~a~~A~------w~VNVQP~SGs~AN~avy~All~-----------PGD~ilg~~l~~ 154 (490)
T 3ou5_A 92 YGGAEVVDEIELLCQRRALEAFDLDPAQ------WGVNVQPYSGSPANLAVYTALLQ-----------PHDRIMGLDLPD 154 (490)
T ss_dssp ----CHHHHHHHHHHHHHHHHTTCCTTT------EEEECCCSSHHHHHHHHHHHHCC------------CCCEECBC---
T ss_pred cCCChHHHHHHHHHHHHHHHHhCCCccc------cCCCCCcCCHHHHHHHHHHHHcC-----------CCCEEEecccCC
Confidence 3445557899999999999999998642 2 24466889999877776654 5666664443
Q ss_pred -CchHHHH-----HHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHH
Q 038818 181 -THSALQK-----AAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCD 254 (486)
Q Consensus 181 -~H~s~~~-----a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~ 254 (486)
.|.+... .....|... +.+..++|+ +++.+|.+.+++...+.+ |.+|++- .+..-..-|++++++
T Consensus 155 GGHltHg~~~~~~~v~~sg~~~-~~~~Y~vd~-~t~~IDyd~~~~~A~~~k-----PklIi~G--~SaY~r~id~~~~re 225 (490)
T 3ou5_A 155 GGHLTHGYMSDVKRISATSIFF-ESMPYKLNP-KTGLIDYNQLALTARLFR-----PRLIIAG--TSAYARLIDYARMRE 225 (490)
T ss_dssp --------------------------CBCEET-TTTEECHHHHHHHHHHHC-----CSEEEEC--CSSCCSCCCHHHHHH
T ss_pred CCcccccccCCCcccccccccc-cccccccCC-CCCcccHHHHHHHHhhcC-----CCeEEEC--CccCccccCHHHHHH
Confidence 4544432 222333311 345556665 367999999999888763 6665553 344456789999999
Q ss_pred HHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchH-------------HHHHh
Q 038818 255 IAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNA-------------LIKAL 321 (486)
Q Consensus 255 i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~-------------~~~~~ 321 (486)
||++.|++|++|.||-.+++....+..-+ +.||.+|.+.||+|.+|. +|++++++... +.+.+
T Consensus 226 IAd~vGA~Lm~DmAHiaGLVA~g~~psP~---~~ADvVTtTTHKTLrGPr-GG~Il~~~~~~~~~~k~~~~~~~~~~kki 301 (490)
T 3ou5_A 226 VCDEVKAHLLADMAHISGLVAAKVIPSPF---KHADIVTTTTHKTLRGAR-SGLIFYRKGVKAVDPKTGREIPYTFEDRI 301 (490)
T ss_dssp HHHHHTCEEEEECGGGHHHHHTTSSCCGG---GTCSEEEEESSSTTCSCS-CEEEEEECSEEEECC--CCEEECCCHHHH
T ss_pred HHhhcccEEEechhhhhhhhcccccCCcc---ccceEEeccccccccCCC-ceEEEeccccccccccccchhHHHHHHHH
Confidence 99999999999999977766544443333 479999999999999997 58888876310 00000
Q ss_pred --cCCcccccCccCCCCCccCCCCccccCCCCCCc-hHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC
Q 038818 322 --STNPEFLRNKASDSKQVVDYKDWQITLSRRFRA-LKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP 398 (486)
Q Consensus 322 --~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~-l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 398 (486)
...| +++++-.... .+...+++..-...+++..++..++|+.|.+.|.+. |++++..
T Consensus 302 n~aVFP-------------------g~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~-G~~vvsG 361 (490)
T 3ou5_A 302 NFAVFP-------------------SLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVSG 361 (490)
T ss_dssp HHHHTT-------------------TTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGG
T ss_pred HhhcCc-------------------cccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhC-CCeeecC
Confidence 0011 1222222222 233334444334567889999999999999999987 9999853
Q ss_pred -CCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeEC-----CEeEEEEEe---cCCCCcHHHHH
Q 038818 399 -RNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVA-----GIYFIRFAV---GATLTEDRHVI 469 (486)
Q Consensus 399 -~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-----~~~~lR~~~---~~~~tt~~did 469 (486)
.+.+.+.+.+.+... .. ++..+.|.+.|+.+-.-+... ....||+.. +.....++|++
T Consensus 362 gTdnHlvLvDl~~~g~----------tG---~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~ 428 (490)
T 3ou5_A 362 GTDNHLVLVDLRPKGL----------DG---ARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFR 428 (490)
T ss_dssp SCSSSEEEEECGGGTC----------CH---HHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHH
T ss_pred CCCceEEEEeccccCC----------CH---HHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHH
Confidence 456777777765321 02 233344445576432211111 134699987 34456778999
Q ss_pred HHHHHHHHHHH
Q 038818 470 AAWKVVQEKLD 480 (486)
Q Consensus 470 ~~i~~l~~~~~ 480 (486)
++.+.|.+++.
T Consensus 429 ~IA~~I~~~l~ 439 (490)
T 3ou5_A 429 RVVDFIDEGVN 439 (490)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99998887653
No 225
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.72 E-value=1.1e-15 Score=154.75 Aligned_cols=311 Identities=8% Similarity=0.001 Sum_probs=166.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHc
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIA 192 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 192 (486)
....++.++++++++ ..+ ..++++|||+|+..|+.+++... . ++.+|......|.....++...
T Consensus 93 ~~~~~la~~l~~~~~-~~~-------~v~~~~sGsea~~~al~~a~~~~--~------~~~ii~~~~~yhg~~~~~~~~~ 156 (429)
T 4e77_A 93 EMEVKMAQLVTDLVP-TMD-------MVRMVNSGTEATMSAIRLARGYT--G------RDKIIKFEGCYHGHADCLLVKA 156 (429)
T ss_dssp HHHHHHHHHHHHHST-TCS-------EEEEESSHHHHHHHHHHHHHHHH--C------CCEEEEETTCCCC---------
T ss_pred HHHHHHHHHHHhhCC-CCC-------EEEEeCcHHHHHHHHHHHHHHhh--C------CCEEEEEcCccCCCChhhhhhc
Confidence 455667788888886 232 68999999999999999887531 0 3344545555555444332222
Q ss_pred CCCCC----------------CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHH
Q 038818 193 GIDPK----------------NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPL 252 (486)
Q Consensus 193 G~g~~----------------~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I 252 (486)
|.+.. .+..+|. .|+++|++++++. +..+.+|+++...+..|.+.| +++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~---~~~~~~vi~ep~~~~~g~~~~~~~~l~~l 226 (429)
T 4e77_A 157 GSGALTLGQPNSPGVPTDFAKHTLTCTY-------NDLASVRQAFEQY---PQEVACIIVEPVAGNMNCIPPLPEFLPGL 226 (429)
T ss_dssp ---------CCCTTSCGGGGTTEEEECT-------TCHHHHHHHHHHS---TTTEEEEEECSSBCTTSCBCCCTTHHHHH
T ss_pred CCcccccCCCCcCCCCCccCCceeecCC-------CCHHHHHHHHHhc---CCCEEEEEECCccCCCCCcCCCHHHHHHH
Confidence 21100 1222221 2899999999752 122456666666666788887 9999
Q ss_pred HHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCcc
Q 038818 253 CDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKA 332 (486)
Q Consensus 253 ~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~ 332 (486)
.++|++||++|++|++|+++ .....+.....++ ..|.+++ .|.++++.+.|+++.++ +.. +.+.......
T Consensus 227 ~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~-~pdi~t~--sK~~~~G~~~G~~~~~~-~~~-~~l~~~~~~~---- 296 (429)
T 4e77_A 227 RALCDEFGALLIIDEVMTGF-RVALAGAQDYYHV-IPDLTCL--GKIIGGGMPVGAFGGRR-EVM-NALAPTGPVY---- 296 (429)
T ss_dssp HHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTC-CCSEEEE--EGGGGTTSCCEEEEECH-HHH-TTBTTTSSBC----
T ss_pred HHHHHHcCCEEEEeccccCc-ccCcchHHHhcCC-CCCeeee--cccccCCCCeEEEEECH-HHH-HHhccCCCcc----
Confidence 99999999999999999865 2211111111122 3466654 59998777788777653 332 2221100000
Q ss_pred CCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhC----CCCeEEecCCCeeEEEEEe
Q 038818 333 SDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGG----DNRFEIVAPRNFAVVCFRV 408 (486)
Q Consensus 333 ~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~ 408 (486)
...+-....+.+.+++..+..-.-+++.++..++.+++++.|++ .+ +....+....++.+.+
T Consensus 297 -------------~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~g~~~~~~~ 362 (429)
T 4e77_A 297 -------------QAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEEN-IPLVVNHVGGMFGLFF 362 (429)
T ss_dssp -------------C--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTT-CCCEEEEETTEEEEEC
T ss_pred -------------ccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC-CceEEEEeeeEEEEEE
Confidence 00011123344444333321100134455566666666666644 32 2111122334566665
Q ss_pred ecCCCCCCCCC-CccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 409 LPSASGLGDGK-ANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 409 ~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
...... .+-. ..........++.+.|.++|++ +.+. +...+|+ +...+++|++++++.|++++++
T Consensus 363 ~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~Gi~-v~~~---~~~~~~~---~~~~t~e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 363 TNADTV-TCYQDVMNCDVERFKRFFHLMLEEGVY-LAPS---AFEAGFM---SLAHSNEDIQKTVNAARRCFAK 428 (429)
T ss_dssp CSSSCC-CSHHHHHTSCHHHHHHHHHHHHHTTEE-CCSS---TTSCEEC---CTTCCHHHHHHHHHHHHHHHTT
T ss_pred ccCccc-ccccccccccHHHHHHHHHHHHHCCeE-Eeec---CCCCEEE---eccCCHHHHHHHHHHHHHHHHh
Confidence 432100 0000 0000023346778888888874 3332 1223444 3567889999999999998754
No 226
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.68 E-value=9.7e-16 Score=153.55 Aligned_cols=326 Identities=11% Similarity=0.019 Sum_probs=198.5
Q ss_pred HHHHHHHHHhhc--CCCccccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHH
Q 038818 87 AGFLGEMLSSGF--NVVGFNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNE 164 (486)
Q Consensus 87 ~~~~~~~l~~~~--n~~~~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~ 164 (486)
+..+.++.. .. +.....|....+..++.+.+.+|+.+..+.+... +.-.+++|.||++|+..++.+....
T Consensus 49 ~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~---~~i~i~~t~G~~~al~~~~~~l~~~---- 120 (405)
T 3k7y_A 49 FDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNLIFGNNSKYIED---KKICTIQCIGGTGAIFVLLEFLKML---- 120 (405)
T ss_dssp CHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHHHHCSSCTTTTT---TCEEEEEEEHHHHHHHHHHHHHHTT----
T ss_pred cHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHHHcCCCCccccc---cceEEEEcCchHHHHHHHHHHHHhc----
Confidence 444555544 32 2234567766778899999999986655433110 0003588999998887776655431
Q ss_pred ccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecC-Cccc
Q 038818 165 IGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVG-TTAI 243 (486)
Q Consensus 165 ~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~g-tt~~ 243 (486)
.+ +.|+++..++.....+++..|. +++.+|+...+++.+|+++|++++++.. ...+|+++.+ +|||
T Consensus 121 -----~~-d~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~----~~~~i~l~~~~~NPT 187 (405)
T 3k7y_A 121 -----NV-ETLYVTNPPYINHVNMIESRGF---NLKYINFFDYNLIDINYDLFLNDLRNIP----NGSSVILQISCYNPC 187 (405)
T ss_dssp -----TC-CEEEEESSCCHHHHHHHHTTTC---EEEEECCEETTTTEECHHHHHHHHHHSC----SSCEEEECCSSCTTT
T ss_pred -----CC-CEEEEeCCCCHhHHHHHHHcCC---eEEEEeccccccCCcCHHHHHHHHHhCC----CCeEEEEeCCCCCCC
Confidence 15 7889999999999999999999 9999998322357999999999997521 1235666554 8999
Q ss_pred cccCC---chHHHHHHHHhCceEEeeccccchhccC-c-c---chhhhcCCCCCC-ceeeccccccC-CCCcceEEEe--
Q 038818 244 TTVDP---LGPLCDIAKRYSIWVHVDAAYAGSACIC-P-E---FRHFIDGIEGAD-SFSLNAHKWFF-TTLDCCCLWV-- 311 (486)
Q Consensus 244 G~idp---l~~I~~i~~~~g~~lhvD~a~g~~~~~~-~-~---~~~~~~~~~~aD-si~~~~hK~l~-~p~~~g~~~~-- 311 (486)
|.+-+ +++|+++|++||+++++|.+|....... + . .+... .. .-. .+..++.|.++ ...-+|++++
T Consensus 188 G~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~-~~-~~~~i~~~S~SK~~~l~GlRiG~~~~~~ 265 (405)
T 3k7y_A 188 SVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFE-EK-NIAFSVCQSFSKNMSLYGERAGALHIVC 265 (405)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHH-TT-TCCEEEEEECTTTSCCTTTTEEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHH-hc-CCcEEEEeeCCccCCCccccceEEEEEe
Confidence 99844 7788899999999999999997654211 0 0 11111 11 112 44567899998 5567888754
Q ss_pred eCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhc--------hHHHHHHHHHHHHHHHHH
Q 038818 312 KNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFG--------VANLRNFLRSHVRMAQLF 383 (486)
Q Consensus 312 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g--------~~g~~~~~~~~~~~a~~l 383 (486)
.+++...+..... ..+... . .+ ....+...++...+. .+.+.++.++..+.++++
T Consensus 266 ~~~~~~~~~~~~l-~~~~~~-------------~--~~-~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l 328 (405)
T 3k7y_A 266 KNQEEKKIVFNNL-CFIVRK-------------F--YS-SPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILF 328 (405)
T ss_dssp SSHHHHHHHHHHH-HHHHHT-------------T--TS-SCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH-HHHHhc-------------c--cC-CCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4554322111000 000000 0 00 011222222222221 123455566678888999
Q ss_pred HHHHh----CCC---CeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEE
Q 038818 384 QELVG----GDN---RFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRF 456 (486)
Q Consensus 384 ~~~L~----~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~ 456 (486)
.+.|+ ++. ++++. +|..+++.|.-.+ . .+.++|.+.|+. +.+. + |+
T Consensus 329 ~~~L~~~~~~~g~~~~~~~~-~p~gg~f~~~~l~--------------~----~~~~~L~~~gV~-v~p~---~----Ri 381 (405)
T 3k7y_A 329 FNKLETYQKKYNLNYDWNVY-KKQRGLFSFVPLL--------------A----KIAEHLKTHHIY-IINN---G----RI 381 (405)
T ss_dssp HHHHHHHGGGGTCCCCGGGG-SSCCSSEEECGGG--------------G----GGTTTTTTTTEE-CCTT---S----EE
T ss_pred HHHHHhhhhhcCCCCCCccc-cCCceEEEecCCC--------------H----HHHHHHHHCCEe-ecCC---C----eE
Confidence 99998 762 14443 5666766653211 1 112344455653 4432 1 99
Q ss_pred EecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 457 AVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 457 ~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
++. ..++++|++++++|++++++
T Consensus 382 s~a--~~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 382 NVS--GITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp EGG--GCCTTHHHHHHHHHHHHHHC
T ss_pred EEe--ccCHHHHHHHHHHHHHHHhh
Confidence 985 44566899999999998865
No 227
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.67 E-value=7.4e-15 Score=146.87 Aligned_cols=292 Identities=9% Similarity=-0.037 Sum_probs=181.6
Q ss_pred cccccChhh-----HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCe----
Q 038818 103 FNWMSSPAA-----TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRL---- 173 (486)
Q Consensus 103 ~~~~~~~~~-----~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~---- 173 (486)
..|....+. .++++.+.+|+. ..|.+... ....++|+|+++++..++.+..+ +++
T Consensus 57 ~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~----~~~i~~t~G~~~al~~~~~~l~~-----------~Gd~~~~ 120 (391)
T 3bwn_A 57 SYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATE----DRYIVVGTGSTQLCQAAVHALSS-----------LARSQPV 120 (391)
T ss_dssp SSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCS----SSEEEEEEHHHHHHHHHHHHHHH-----------TSSSSSE
T ss_pred hcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCC----CCeEEEeCChHHHHHHHHHHhcC-----------CCCCCcc
Confidence 345554454 788888888877 45653210 12689999999998877776644 455
Q ss_pred EEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHH
Q 038818 174 VVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLC 253 (486)
Q Consensus 174 ~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~ 253 (486)
.|+++..+|.++...++..|. +++.+++|.+ .++ . ..+.+|+++.++|+||.+-+ +|+
T Consensus 121 ~Vlv~~P~y~~~~~~~~~~g~---~~~~~~~d~~---~l~--------~------~~~k~v~l~~p~NPtG~~~~--~l~ 178 (391)
T 3bwn_A 121 SVVAAAPFYSTYVEETTYVRS---GMYKWEGDAW---GFD--------K------KGPYIELVTSPNNPDGTIRE--TVV 178 (391)
T ss_dssp EEEECSSCCTHHHHHHHTTCB---TTEEEEEEST---TCC--------C------CSCEEEEEESSCTTTCCCCC--CCC
T ss_pred eEEEcCCCchhHHHHHHHcCC---eEEEecCCHH---HcC--------C------CCCEEEEECCCCCCCchhHH--HHH
Confidence 788999999999999999999 8999998752 222 0 12457778999999999975 554
Q ss_pred HHHHHhC--ceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccC
Q 038818 254 DIAKRYS--IWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRN 330 (486)
Q Consensus 254 ~i~~~~g--~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~ 330 (486)
+ ++++ +++++|++|+.. ... .+......+.+..+++|.++.| ..+|++++.++......... ..+...
T Consensus 179 ~--~~~~~~~~ii~De~y~~~-----~~~-~l~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~-~~~~~~ 249 (391)
T 3bwn_A 179 N--RPDDDEAKVIHDFAYYWP-----HYT-PITRRQDHDIMLFTFSKITGHAGSRIGWALVKDKEVAKKMVEY-IIVNSI 249 (391)
T ss_dssp -------CCCEEEEECTTCST-----TTS-CCCCCBCCSEEEEEHHHHHSCGGGCEEEEEECCHHHHHHHHHH-HHHHHS
T ss_pred H--HhhcCCCEEEEeCCCCCC-----CCC-ccccCCCCeEEEEechhhcCCCccceEEEEecCHHHHHHHHHH-hccccc
Confidence 4 2255 999999999631 111 1111224567888999998744 34688887555443322111 011000
Q ss_pred ccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--c----------hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEecC
Q 038818 331 KASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--G----------VANLRNFLRSHVRMAQLFQELVGGDNRFEIVAP 398 (486)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g----------~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 398 (486)
....+..+++...+ + .+.++++.++..++++++.+.|++++++++..+
T Consensus 250 --------------------~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p 309 (391)
T 3bwn_A 250 --------------------GVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKY 309 (391)
T ss_dssp --------------------SCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCC
T ss_pred --------------------CCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccC
Confidence 01222222222222 1 345777888888999999999999887776533
Q ss_pred CCe------------e-EEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeEC-CEeEEEEEecCCCCc
Q 038818 399 RNF------------A-VVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVA-GIYFIRFAVGATLTE 464 (486)
Q Consensus 399 ~~~------------~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-~~~~lR~~~~~~~tt 464 (486)
... + .+.+.+... ..+.+.+.+.|+.+..+..+. +.+++|+++. ++
T Consensus 310 ~~~~~~f~~~~~~~~g~~~~~~~~~~-----------------~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~---~~ 369 (391)
T 3bwn_A 310 PEAFCNYFGKSLESYPAFAWLGTKEE-----------------TDLVSELRRHKVMSRAGERCGSDKKHVRVSML---SR 369 (391)
T ss_dssp CCEEETTTTEEECCCCSEEEEEESSS-----------------CCHHHHHHHTTEECEEGGGGTCCTTEEEEESC---SC
T ss_pred CccccccccccCCCcceEEEecCCcH-----------------HHHHHHHHHCCEEEccCCCCCCCCCEEEEEec---CC
Confidence 211 1 234444321 123444556787654443332 2568999985 37
Q ss_pred HHHHHHHHHHHHHHHHH
Q 038818 465 DRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 465 ~~did~~i~~l~~~~~~ 481 (486)
+++++++++.|++++++
T Consensus 370 ~e~i~~~~~~L~~~~~~ 386 (391)
T 3bwn_A 370 EDVFNVFLERLANMKLI 386 (391)
T ss_dssp HHHHHHHHHHHHSCC--
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 77999999999877643
No 228
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.66 E-value=2.5e-15 Score=156.30 Aligned_cols=349 Identities=10% Similarity=0.006 Sum_probs=194.4
Q ss_pred ccccChhhHHHHHH-HHHHHHHHcCC--CC-CCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecC
Q 038818 104 NWMSSPAATELENI-VMDWLGEMLKL--PK-SFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSD 179 (486)
Q Consensus 104 ~~~~~~~~~~le~~-~~~~l~~l~g~--~~-~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~ 179 (486)
.|...++...+.++ +..|+.+.++. +. . ...+++|+|+++++..++.+...+.+ ..+++.|+++.
T Consensus 133 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~-----~~~I~~t~G~~eal~~~~~~l~~~~l------~~~Gd~Vlv~~ 201 (546)
T 2zy4_A 133 NYPVPPRMLNISEKIVRQYIIREMGADAIPSE-----SVNLFAVEGGTAAMAYIFESLKLNGL------LKAGDKVAIGM 201 (546)
T ss_dssp SCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGG-----GEEEEEEEHHHHHHHHHHHHHHHTTS------SCTTCEEEEEE
T ss_pred CCCCCcCCHHHHHHHHHHHHHHhccCCCCCCC-----cceEEEECCHHHHHHHHHHHhhhhhc------CCCCCEEEEeC
Confidence 45444344445444 45566666543 11 1 12789999999998777665321100 01567788888
Q ss_pred CCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC---chHHHHHH
Q 038818 180 QTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---LGPLCDIA 256 (486)
Q Consensus 180 ~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---l~~I~~i~ 256 (486)
.+|+....++...+.|. +++.+|++++++|.+|+++|++++.. .+.+|+++.++|++|.+-+ +++|+++|
T Consensus 202 P~y~~~~~~~~~~~~g~-~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a 274 (546)
T 2zy4_A 202 PVFTPYIEIPELAQYAL-EEVAINADPSLNWQYPDSELDKLKDP------AIKIFFCVNPSNPPSVKMDQRSLERVRNIV 274 (546)
T ss_dssp SCCHHHHHHHHSTTSCC-EEEEEECBGGGTTBCCHHHHGGGGST------TEEEEEEESSCSSSCBCCCHHHHHHHHHHH
T ss_pred CCCccHHHHHHHcCCCc-EEEEEecCcccCCCCCHHHHHHhhCC------CCeEEEEECCCCCCCccCCHHHHHHHHHHH
Confidence 99999888877654322 78889987655678999999887632 2457777899999999866 66788888
Q ss_pred --HHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCc--------
Q 038818 257 --KRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNP-------- 325 (486)
Q Consensus 257 --~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~-------- 325 (486)
+++|+++++|++|+.+.......... ....+.+..+++|+++.| ..+|+++..++..........+
T Consensus 275 ~~~~~~~~ii~De~y~~~~~~~~s~~~~---~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~p~~~~~~l~ 351 (546)
T 2zy4_A 275 AEHRPDLMILTDDVYGTFADDFQSLFAI---CPENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVALD 351 (546)
T ss_dssp HHTCTTCEEEEECTTGGGSTTCCCHHHH---CGGGEEEEEESTTTTTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHH
T ss_pred HhccCCcEEEEeCcchhhcccCcCHHHh---CCCCEEEEEeCccccCCCCcceEEEEECCHHHHHHHHhhcchhhhHHHH
Confidence 78999999999998654211111111 123456788999999744 4589988877533322211100
Q ss_pred -ccccCccCCCCCccCC--------CCccccCCCCCCchHHHH----HH-HHh--chHHHHHHHHHHHHHHHHHHHHHhC
Q 038818 326 -EFLRNKASDSKQVVDY--------KDWQITLSRRFRALKLWL----VL-RSF--GVANLRNFLRSHVRMAQLFQELVGG 389 (486)
Q Consensus 326 -~y~~~~~~~~~~~~~~--------~~~~~~~sr~~~~l~~~~----~l-~~~--g~~g~~~~~~~~~~~a~~l~~~L~~ 389 (486)
.|-.... ......+ .......+.....+.... ++ ..+ +....+++.+...++.+.+.+.|.
T Consensus 352 ~~~~~~~~--~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~~~~~~~~~~r~~~~~r~~~l~~~L~- 428 (546)
T 2zy4_A 352 HRYRSLLP--DVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMDEADEYKHTLKQLIRRRETTLYRELG- 428 (546)
T ss_dssp HHHTTTCS--CGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHGGGT-
T ss_pred HHhhhccc--cccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 0000000 0000000 000000000111111111 11 222 234455666666677777888875
Q ss_pred CCCeEEecCCCeeEE-EEEeecCCCCCCCCCCcc---ch--H-HHHHHHHHHHHhcCcEEEeeeeEC-CEeEEEEEecCC
Q 038818 390 DNRFEIVAPRNFAVV-CFRVLPSASGLGDGKANE---GA--N-ELNRKLLESINASGQLYVSHGMVA-GIYFIRFAVGAT 461 (486)
Q Consensus 390 ~~~~~~~~~~~~~~v-~f~~~~~~~~~~~~~~~~---~~--~-~~~~~l~~~l~~~g~~~~~~~~~~-~~~~lR~~~~~~ 461 (486)
. ++.+ .++..+.+ .+.+..-.....+ .. .. + .....+.+.+.+.|+.+.++..+. +..++|+++.
T Consensus 429 ~-~~~~-~~~~~~~~l~~~l~~~~~~~~~---~~~~~wl~~~~~~~~~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~-- 501 (546)
T 2zy4_A 429 M-PPLR-DENAVDYYTLIDLQDVTAKLYG---EAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASLA-- 501 (546)
T ss_dssp S-SCCC-CTTBCCSEEEEEHHHHHHHHHC---HHHHHHHHHHCCHHHHHHHHHHHHSCCCEESSCTTCSSCEEEEESS--
T ss_pred C-Cccc-CCCCeeEEEEEEHHHhhccccc---HHHHHHhhccCCHHHHHHHHHHHCCEEEeCccccCCCCCeEEEEec--
Confidence 3 3332 24455544 3443210000000 00 00 0 011235566677898655544332 3568999995
Q ss_pred CCcHHHHHHHHHHHHHHHHHHh
Q 038818 462 LTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 462 ~tt~~did~~i~~l~~~~~~l~ 483 (486)
..++++++++++.|+++++++.
T Consensus 502 ~~~~e~i~~~~~~l~~~l~~~~ 523 (546)
T 2zy4_A 502 NLNEYEYAAIGRALRKMADELY 523 (546)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHH
Confidence 3467899999999999887665
No 229
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.65 E-value=1.3e-14 Score=146.72 Aligned_cols=309 Identities=11% Similarity=0.024 Sum_probs=171.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
..++.++.++++++++ ..+ ..++++||++|+..++.++|... . ++.+|+.....|.....+...
T Consensus 91 ~~~~~~l~~~l~~~~~-~~~-------~v~~~~~g~ea~~~al~~ar~~~--~------~~~vi~~~~~yhg~~~~~~~~ 154 (424)
T 2e7u_A 91 SPLEVALAKKVKRAYP-FVD-------LVRFVNSGTEATMSALRLARGYT--G------RPYIVKFRGNYHGHADGLLVE 154 (424)
T ss_dssp CHHHHHHHHHHHHHCT-TCC-------EEEEESSHHHHHHHHHHHHHHHH--C------CCEEEEETTCCCCCCGGGSEE
T ss_pred CHHHHHHHHHHHHhCC-CCC-------EEEEeCCHHHHHHHHHHHHHHhh--C------CCEEEEECCCcCCCcHHHHHh
Confidence 4566677788888885 333 68999999999999999876432 0 344555554445322222111
Q ss_pred c-------------CCC---CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chH
Q 038818 192 A-------------GID---PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGP 251 (486)
Q Consensus 192 ~-------------G~g---~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~ 251 (486)
. |+. ...++.+|. .|+++|++++++.. ..+.+|+++...+++|.+-| +++
T Consensus 155 ~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~ 224 (424)
T 2e7u_A 155 AGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREVLKRRG---EEIAAIIFEPVVGNAGVLVPTEDFLKA 224 (424)
T ss_dssp CCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHHHHHHG---GGEEEEEECSSBCTTSCBCCCHHHHHH
T ss_pred cCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHHHHhCC---CCEEEEEEeCCCCCCCCcCCCHHHHHH
Confidence 1 210 013445543 38999999997531 12455666655556898877 999
Q ss_pred HHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCc
Q 038818 252 LCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNK 331 (486)
Q Consensus 252 I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~ 331 (486)
|.++ ++||++|++|++|+++ .....+.....++ ..|.+ +++|+++++..+|+++.+++ .. +.+.......
T Consensus 225 l~~l-~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~--s~sK~l~~G~~~G~~~~~~~-~~-~~~~~~~~~~--- 294 (424)
T 2e7u_A 225 LHEA-KAYGVLLIADEVMTGF-RLAFGGATELLGL-KPDLV--TLGKILGGGLPAAAYAGRRE-IM-EKVAPLGPVY--- 294 (424)
T ss_dssp HHHG-GGGTCEEEEECTTTTT-TSSTTHHHHHHTC-CCSEE--EECGGGGTTSSCEEEEECHH-HH-TTBTTTSSBC---
T ss_pred HHHH-HHcCCEEEEecCcccc-ccchhHHHHHhCC-Ccchh--hhhhhhhCCcceEEEEEcHH-HH-hhhcccCCcc---
Confidence 9999 9999999999999865 3221111111122 35665 55799997677898887653 32 2221100000
Q ss_pred cCCCCCccCCCCccccCCCCCCchHHHHHHHHhch-HHHHHHHHHHHHHHHHHHHHHhCC---CCeEEecCCCeeEEEEE
Q 038818 332 ASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGV-ANLRNFLRSHVRMAQLFQELVGGD---NRFEIVAPRNFAVVCFR 407 (486)
Q Consensus 332 ~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~---~~~~~~~~~~~~~v~f~ 407 (486)
...+-....+.+.+++..+.. +..+++.++..++.+++++.|+++ .++....++...++.+.
T Consensus 295 --------------~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~ 360 (424)
T 2e7u_A 295 --------------QAGTLSGNPLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGSMITVF 360 (424)
T ss_dssp --------------CCCTTCSCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEE
T ss_pred --------------cCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeeceEEEEE
Confidence 000111233433333333311 111456777788888888888653 12311112334566666
Q ss_pred eecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 408 VLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
+.......-. ...........++.+.|.++|++ +.+.. ...+|++ ...++++++++++.|+++
T Consensus 361 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~Gv~-v~~~~---~~~~~~~---~~~t~~~i~~~l~~l~~~ 423 (424)
T 2e7u_A 361 FTEGPVVTFQ-DARRTDTELFKRFFHGLLDRGIY-WPPSN---FEAAFLS---VAHREEDVEKTLEALRKA 423 (424)
T ss_dssp SSSSCCCSHH-HHTTSCHHHHHHHHHHHHTTTEE-CCSSS---SSCEECC---TTCCHHHHHHHHHHHHHH
T ss_pred EeCCCCcchh-hhcccCHHHHHHHHHHHHHCCeE-EeccC---CCceEee---ccCCHHHHHHHHHHHHHh
Confidence 5431000000 00000023345678888888874 33321 1234443 467888999999999875
No 230
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.56 E-value=2.3e-14 Score=144.96 Aligned_cols=306 Identities=7% Similarity=-0.074 Sum_probs=188.3
Q ss_pred HHHHHHHHHhhc-CCC--ccccccCh-h---hHHHHHHHHHHHHHHcCC--CCCCccCCCcceEEcCCchHHHHHHHHHH
Q 038818 87 AGFLGEMLSSGF-NVV--GFNWMSSP-A---ATELENIVMDWLGEMLKL--PKSFLFSGTGGGVIQGTTCEAILCTLAAA 157 (486)
Q Consensus 87 ~~~~~~~l~~~~-n~~--~~~~~~~~-~---~~~le~~~~~~l~~l~g~--~~~~~~~~~~~~~~t~ggt~a~~~al~~a 157 (486)
+..+.+.+...+ ..+ ...|.... + ..++++.+.+++.+..+. +++ .+++|+|+++++..++.+.
T Consensus 71 ~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~-------~iv~t~G~~~al~~~~~~l 143 (427)
T 2hox_A 71 EYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDR-------YIVFGVGVTQLIHGLVISL 143 (427)
T ss_dssp HHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTC-------EEEEESHHHHHHHHHHHHH
T ss_pred CHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCC-------EEEEeCCHHHHHHHHHHHH
Confidence 344455555444 122 12254444 4 678999888888876543 333 6899999999987776655
Q ss_pred --------HHHHHHHccccCCCCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCC
Q 038818 158 --------RDQILNEIGRENISRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGL 229 (486)
Q Consensus 158 --------~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~ 229 (486)
.. +++.|+++...|.++...++..|. +++.+ .+|+++|++++++.
T Consensus 144 ~~~~~~~~~~-----------~Gd~Vlv~~P~y~~~~~~~~~~g~---~~~~~--------~~d~~~l~~~~~~~----- 196 (427)
T 2hox_A 144 SPNMTATPDA-----------PESKVVAHAPFYPVFREQTKYFDK---KGYVW--------AGNAANYVNVSNPE----- 196 (427)
T ss_dssp SCCTTTCTTS-----------CCEEEEECSSCCHHHHHHHHHSCB---TTEEE--------EEEGGGGTTCSCGG-----
T ss_pred hhccccccCC-----------CCCEEEEeCCCcccHHHHHHHcCC---eeeee--------cCCHHHHHHhhcCC-----
Confidence 22 678899999999999999999998 76533 46777888777543
Q ss_pred ccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceE
Q 038818 230 IPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCC 308 (486)
Q Consensus 230 ~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~ 308 (486)
+.+|+++.++|++|.+-+ + +++ +++.+.|.++.... ..... + ....+.+..+++|.++.| .-+|+
T Consensus 197 -~k~v~l~~p~NPtG~~~~-~----~l~--~~~~i~d~~~~~~~---~s~~~-~--~~~~~i~~~S~SK~~g~~G~RiG~ 262 (427)
T 2hox_A 197 -QYIEMVTSPNNPEGLLRH-A----VIK--GCKSIYDMVYYWPH---YTPIK-Y--KADEDILLFTMSKFTGHSGSRFGW 262 (427)
T ss_dssp -GEEEEEESSCTTTCCCCC-C----SST--TCEEEEECTTCSTT---TSCCC-S--CBCCSEEEEEHHHHTSCGGGCCEE
T ss_pred -ceEEEEcCCCCCcccccH-H----HHc--CCCEEEeecccCCC---CCccc-c--CCCceEEEEeChhcCCCCCceEEE
Confidence 347788899999999988 4 233 56788887663210 01111 1 135688999999998744 34798
Q ss_pred EEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHh--c-----------hHHHHHHHHH
Q 038818 309 LWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSF--G-----------VANLRNFLRS 375 (486)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g-----------~~g~~~~~~~ 375 (486)
++++++.......... .+... ....+..+++...+ + .+.+++..++
T Consensus 263 ~~~~~~~l~~~l~~~~-~~~~~--------------------~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~ 321 (427)
T 2hox_A 263 ALIKDESVYNNLLNYM-TKNTE--------------------GTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKK 321 (427)
T ss_dssp EEECCHHHHHHHHHHH-HHHTS--------------------SCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHH
T ss_pred EEECCHHHHHHHHHHH-HhcCC--------------------CCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHH
Confidence 8887665543222111 01000 01222222222222 1 1234556677
Q ss_pred HHHHHHHHHHHHhCCCCeEE--ec-----------CCCeeE-EEEEeecCCCCCCCCCCccchHHHHHHHHHHHH-hcCc
Q 038818 376 HVRMAQLFQELVGGDNRFEI--VA-----------PRNFAV-VCFRVLPSASGLGDGKANEGANELNRKLLESIN-ASGQ 440 (486)
Q Consensus 376 ~~~~a~~l~~~L~~~~~~~~--~~-----------~~~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~ 440 (486)
..++.+++.+.|++++++++ +. .|..+. +.+.+... ..++.+.+. +.|+
T Consensus 322 ~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~~----------------~~~~~~~ll~~~gI 385 (427)
T 2hox_A 322 LRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWE----------------EDKDCYQTFQNGRI 385 (427)
T ss_dssp HHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECSG----------------GGCSHHHHHHHTTE
T ss_pred HHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECCCc----------------HHHHHHHHHHHCCE
Confidence 78889999999999888875 21 122233 34455321 112344443 5677
Q ss_pred EEEeeeeEC-CEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 038818 441 LYVSHGMVA-GIYFIRFAVGATLTEDRHVIAAWKVVQEKLD 480 (486)
Q Consensus 441 ~~~~~~~~~-~~~~lR~~~~~~~tt~~did~~i~~l~~~~~ 480 (486)
.+..+..+. +.+++|+++.+ ++++++++++.|.++++
T Consensus 386 ~v~pg~~f~~~~~~~Ris~~~---~~e~l~~~l~~l~~~~~ 423 (427)
T 2hox_A 386 NTQNGVGFEASSRYVRLSLIK---TQDDFDQLMYYLKDMVK 423 (427)
T ss_dssp ECEEGGGGTSCTTEEEEECSS---CHHHHHHHHHHHHHHHT
T ss_pred EEcCCCccCCCCCEEEEEecC---CHHHHHHHHHHHHHHHh
Confidence 544433332 35789999953 67799999999988763
No 231
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.56 E-value=3.5e-13 Score=135.85 Aligned_cols=307 Identities=12% Similarity=0.034 Sum_probs=173.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHc
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIA 192 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 192 (486)
.+|.++.+.+++++..-+ ...|+++|||||..|+.++|... + ++.+|......|-.........
T Consensus 127 ~~~~~lae~l~~~~p~~~--------~v~f~~SGsEA~e~AiklAr~~t-------g-r~~ii~~~~~yHG~t~~~~~~~ 190 (454)
T 4ao9_A 127 LLEGRLARLICERFPQIE--------QLRFTNSGTEANLMALTAALHFT-------G-RRKIVVFSGGYHGGVLGFGARP 190 (454)
T ss_dssp SSHHHHHHHHHHHSTTCS--------EEEEESSHHHHHHHHHHHHHHHH-------T-CCEEEEETTCBCSTTCBBSSSB
T ss_pred HHHHHHHHHHHHhCCCCC--------EEEEeCchHHHHHHHHHHHHhcc-------c-CCeEEEEeCCcCCccccccccc
Confidence 345566677888774322 57899999999999999999763 1 2334445555564321111111
Q ss_pred CCC--CCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHHHHHHhCceEEee
Q 038818 193 GID--PKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCDIAKRYSIWVHVD 266 (486)
Q Consensus 193 G~g--~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~i~~~~g~~lhvD 266 (486)
+-. ......+|. -|++++++.|++.. ....+|++.......|.+-| +++|.++|++||++|++|
T Consensus 191 ~~~~~~~~~~~~p~-------nd~~~l~~~l~~~~---~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~D 260 (454)
T 4ao9_A 191 SPTTVPFDFLVLPY-------NDAQTARAQIERHG---PEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFD 260 (454)
T ss_dssp CTTSCCSEEEEECT-------TCHHHHHHHHHHTG---GGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEE
T ss_pred cCccCCCCcccCCC-------chHHHHHHHHhhcC---CceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEE
Confidence 110 012233332 38999999998643 23556777777777888877 999999999999999999
Q ss_pred ccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccc
Q 038818 267 AAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQI 346 (486)
Q Consensus 267 ~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 346 (486)
+++.|- ....+....-++ ..|.+++ .|.+++.++.|.+..+++ . .+.+......+..
T Consensus 261 EV~tGR--~G~~~a~e~~gv-~PDi~t~--gK~lggG~Piga~~~~~e-i-~~~~~~~~~~~~h---------------- 317 (454)
T 4ao9_A 261 EVMTSR--LAPHGLANKLGI-RSDLTTL--GKYIGGGMSFGAFGGRAD-V-MALFDPRTGPLAH---------------- 317 (454)
T ss_dssp CTTGGG--GSTTCHHHHHTC-CCSEEEE--EGGGGTTSSCEEEEECHH-H-HGGGCTTTCSCCC----------------
T ss_pred CCCcCC--CccccchhccCC-CCcEEEe--ccccCCCCcceeeeeHHH-H-HHHHhhccCCccc----------------
Confidence 998651 111111112234 4688765 588887778898888764 2 2233211111100
Q ss_pred cCCCCCCchHHH---HHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC----CC-eEEecCCCeeEEEEEeecCCCCCCCC
Q 038818 347 TLSRRFRALKLW---LVLRSFGVANLRNFLRSHVRMAQLFQELVGGD----NR-FEIVAPRNFAVVCFRVLPSASGLGDG 418 (486)
Q Consensus 347 ~~sr~~~~l~~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~-~~~~~~~~~~~v~f~~~~~~~~~~~~ 418 (486)
..+-....+++. ++|+.+-.+ +..++..++.++|++.|+++ +- .++.+. ..++.+.+.....+....
T Consensus 318 ~~T~~gnPla~AAala~L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~--G~m~gi~f~~~~~~~~~~ 392 (454)
T 4ao9_A 318 SGTFNNNVMTMAAGYAGLTKLFTP---EAAGALAERGEALRARLNALCANEGVAMQFTGI--GSLMNAHFVQGDVRSSED 392 (454)
T ss_dssp CCTTTTCHHHHHHHHHHHHHTSCH---HHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEE--TTEEEEESCCSCCCSGGG
T ss_pred cCCCCCCHHHHHHHHHHHHHHhcc---ChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeee--ceEEEEEEecCCCCCHHH
Confidence 111122344443 444444333 34566666777777776543 21 122211 234455443221110000
Q ss_pred CCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 419 KANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 419 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
. ..........+...|.++|++ +.+. + . +.+ ..-.|++|||+++++|++++.++.
T Consensus 393 ~-~~~d~~~~~~~~~~ll~~Gv~-~~p~---~--~--~~~-s~~~T~~dId~~l~al~~~l~~~~ 447 (454)
T 4ao9_A 393 L-AAVDGRLRQLLFFHLLNEDIY-SSPR---G--F--VVL-SLPLTDADIDRYVAAIGSFIGGHG 447 (454)
T ss_dssp G-TTCCHHHHHHHHHHHHHTTEE-CCTT---C--E--EEC-CTTCCHHHHHHHHHHHHHHHHHSG
T ss_pred H-HhhhHHHHHHHHHHHHHCCEE-EcCC---C--C--EEE-eCCCCHHHHHHHHHHHHHHHHhcc
Confidence 0 011134556777888899973 4332 1 2 233 234577899999999999987653
No 232
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.51 E-value=2.4e-12 Score=130.70 Aligned_cols=335 Identities=12% Similarity=0.089 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHH
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQI 191 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 191 (486)
++.+.++.+.|.++...+-+ ..+|+++|||||..|+.+||....++ |..+ ...+|......|-...-++..
T Consensus 110 ~~~~~~lAe~L~~~~p~~~~-------~v~f~~sGsEA~e~AiKlAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~~a~s~ 180 (473)
T 4e3q_A 110 SDQTVMLSEKLVEVSPFDSG-------RVFYTNSGSEANDTMVKMLWFLHAAE-GKPQ-KRKILTRWNAYHGVTAVSASM 180 (473)
T ss_dssp EHHHHHHHHHHHHHSSCSSC-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCTT-CCEEEEETTCCCCSSHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCcc-------EEEEeCchHHHHHHHHHHHHHHHHhc-CCCC-cceEEEeeceECCCccccccc
Confidence 34455677888888765433 57999999999999999998754332 2111 223344444556444444444
Q ss_pred cC--------CCCCCeEEEecCC----CCCccc-------CHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----
Q 038818 192 AG--------IDPKNFRAIKTTK----SSSFTL-------TPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP---- 248 (486)
Q Consensus 192 ~G--------~g~~~v~~v~~d~----~~~~~~-------d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp---- 248 (486)
.| .....+..++... ...+.. ..++|++.|.+.. ...+.+|++.-.....|.+-|
T Consensus 181 tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--~~~iAavi~EPiqg~gG~~~p~~~f 258 (473)
T 4e3q_A 181 TGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREG--ADTIAGFFAEPVMGAGGVIPPAKGY 258 (473)
T ss_dssp SCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTSBCCCTTH
T ss_pred cccccccccCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhC--CCceEEEEeCCccCCCCceeCCHHH
Confidence 33 2222445554321 000111 1345555554431 223556777776667787754
Q ss_pred chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCC-CcceEEEeeCchHHHHHhcCCccc
Q 038818 249 LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEF 327 (486)
Q Consensus 249 l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y 327 (486)
+++|.++|++||+.|++|+++.|+.-...-+....-++ ..|.+++ -|.+++. ++.|.++++++-. +.+......
T Consensus 259 l~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv-~PDi~t~--~K~l~gG~~Pl~av~~~~~i~--~~~~~~~~~ 333 (473)
T 4e3q_A 259 FQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDF-TPDAIIS--SKNLTAGFFPMGAVILGPELS--KRLETAIEA 333 (473)
T ss_dssp HHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTC-CCSEEEE--CGGGGTTSSCCEEEEECHHHH--HHHHHHHHH
T ss_pred HHHHHHHhcccceEEeccCccccCCcccchhHHHhcCC-CCChHHh--cccccCCCCCcccccccHHHH--HHhcccccc
Confidence 89999999999999999999987643222222222233 5788776 4877765 6789998887521 122110000
Q ss_pred ccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCC---CCeEEecCCCeeEE
Q 038818 328 LRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGD---NRFEIVAPRNFAVV 404 (486)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~~~~~~~~~~v 404 (486)
... +....+-....+++.+++..+..-.-+++.++..++..+|.+.|+++ |.+.=+.. ...++
T Consensus 334 ~~~-------------~~hg~T~~Gnpla~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vRG-~Gl~~ 399 (473)
T 4e3q_A 334 IEE-------------FPHGFTASGHPVGCAIALKAIDVVMNEGLAENVRRLAPRFEERLKHIAERPNIGEYRG-IGFMW 399 (473)
T ss_dssp HSC-------------CCCCCTTTTCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTTSTTEEEEEE-ETTEE
T ss_pred ccc-------------cccCCCCCCCcchhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHHHhcCCCeeEEee-cceEE
Confidence 000 00011112344544444444321111234556666777777777543 44321100 11244
Q ss_pred EEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHhh
Q 038818 405 CFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGILA 484 (486)
Q Consensus 405 ~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~~ 484 (486)
.+.+..+.... ...........++.+.+.++|.++ .+. + ..+|++. ....|++|||++++.|+++++++.+
T Consensus 400 gielv~~~~~~---~~~~~~~~~~~~~~~~~~~~Gll~-~~~---g-~~i~l~P-PL~it~~eid~~~~~l~~al~~v~a 470 (473)
T 4e3q_A 400 ALEAVKDKASK---TPFDGNLSVSERIANTCTDLGLIC-RPL---G-QSVVLCP-PFILTEAQMDEMFDKLEKALDKVFA 470 (473)
T ss_dssp EEEECSBTTTT---BCCCGGGCHHHHHHHHHHHTTEEC-EEE---T-TEEEECC-CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCcccc---ccccccHHHHHHHHHHHHHCCcEE-Eec---C-CEEEEeC-CCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 45443221100 000111234567888888899753 221 2 3688875 3467899999999999999998876
Q ss_pred c
Q 038818 485 T 485 (486)
Q Consensus 485 ~ 485 (486)
+
T Consensus 471 e 471 (473)
T 4e3q_A 471 E 471 (473)
T ss_dssp H
T ss_pred H
Confidence 4
No 233
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.51 E-value=6e-11 Score=120.00 Aligned_cols=317 Identities=15% Similarity=0.069 Sum_probs=182.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHHHHc
Q 038818 113 ELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAAQIA 192 (486)
Q Consensus 113 ~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 192 (486)
+.+.++.+.|.+++..+.. ...+|+++|||||..|+..||... + +..+|......|-...-+....
T Consensus 107 ~~~~~lae~L~~~~p~~~~------~~v~f~~sGsEA~e~AlklAr~~t-------~-r~~ii~~~~~yHG~t~~als~t 172 (456)
T 4atq_A 107 EGYVAVTEQLNRLTPGDHA------KRTVLFNSGAEAVENAVKVARLAT-------G-RDAVVAFDHAYHGRTNLTMALT 172 (456)
T ss_dssp HHHHHHHHHHHHHSSCSSC------EEEEEESSHHHHHHHHHHHHHHHH-------C-CCEEEEETTCCCCSSHHHHHHC
T ss_pred HHHHHHHHHHHHhCCCCCC------cEEEEeCChHHHHHHHHHHHhhhh-------c-CCeEEEEecccCCccccccccc
Confidence 3344566778888753321 146889999999999999998763 1 2334444445564444444433
Q ss_pred CCC----------CCCeEEEecCCC----CCcccCHHHHHHHHHHHHH--CCCccEEEEeecCCccccccCC----chHH
Q 038818 193 GID----------PKNFRAIKTTKS----SSFTLTPESLQAAIDLDIQ--AGLIPLFLCATVGTTAITTVDP----LGPL 252 (486)
Q Consensus 193 G~g----------~~~v~~v~~d~~----~~~~~d~~~L~~~l~~~~~--~g~~p~~vv~~~gtt~~G~idp----l~~I 252 (486)
+-. ...+..+|.... .....+.+.+++.++...+ .+..+..|++.-.....|.+-| +++|
T Consensus 173 ~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~l 252 (456)
T 4atq_A 173 AKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPAL 252 (456)
T ss_dssp CCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHH
T ss_pred cCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHH
Confidence 321 124666665310 0112345666665553221 2334667777776667787755 8999
Q ss_pred HHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCCcccccCcc
Q 038818 253 CDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTNPEFLRNKA 332 (486)
Q Consensus 253 ~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~~~y~~~~~ 332 (486)
.++|++||+.|++|+++.|+.-...-+....-++ ..|.+++. |.+++.++.|.++.+++-. +.+ .+...
T Consensus 253 r~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~g--K~lggg~P~~av~~~~~i~--~~~--~~~~~---- 321 (456)
T 4atq_A 253 SEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGV-VPDIITMA--KGIAGGLPLSAITGRADLL--DAV--HPGGL---- 321 (456)
T ss_dssp HHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-CCSEEEEC--GGGGTTSSCEEEEEEHHHH--TTS--CTTSS----
T ss_pred HHHHhhcCCceEecccccccCCccccccccccCC-CCchhhhh--hcccCcCCceeeEecHHHH--hcc--cccCC----
Confidence 9999999999999999987543222222222234 57888875 7777777889988886521 111 11110
Q ss_pred CCCCCccCCCCccccCCCCCCchHHHHHHH---HhchHHHHHHHHHHHHHHHHHHHHHhCC----CC--eEEecCCC--e
Q 038818 333 SDSKQVVDYKDWQITLSRRFRALKLWLVLR---SFGVANLRNFLRSHVRMAQLFQELVGGD----NR--FEIVAPRN--F 401 (486)
Q Consensus 333 ~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~---~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~--~~~~~~~~--~ 401 (486)
..+-....+++.+++. .+-.++ +.++..++.++|.+.|+++ +. ..++.+.+ .
T Consensus 322 --------------~~Tf~gnpla~aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~G 384 (456)
T 4atq_A 322 --------------GGTYGGNPVACAAALAAIDTMEQHD---LNGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRG 384 (456)
T ss_dssp --------------CCSSSSCHHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEET
T ss_pred --------------CCCCCCChHHHHhhHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecc
Confidence 1111224444444444 443333 4455566666666666442 21 11121111 2
Q ss_pred eEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 038818 402 AVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDG 481 (486)
Q Consensus 402 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~ 481 (486)
.++.+.+..+.. .....+...++.+.+.++|.++..... ....+|++. ....|+++||++++.|+++++.
T Consensus 385 l~~giel~~~~~-------~~~~~~~~~~v~~~~~~~Gvl~~~~g~--~~~~irl~P-pL~it~~~id~~l~~l~~al~a 454 (456)
T 4atq_A 385 AMLAIELVQPGS-------KEPNAELTKAVAAACLKEGVIILTCGT--YGNVIRLLP-PLVISDELLIDGLEVLAAAIKA 454 (456)
T ss_dssp TEEEEEEBCTTS-------CCBCHHHHHHHHHHHHHTTEECEEECT--TSCEEEECC-CTTCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEecCCC-------CCcCHHHHHHHHHHHHHCCCEEEecCC--CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHh
Confidence 244555543221 111245677888899999985433221 235689886 3467889999999999998764
No 234
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.49 E-value=1.1e-12 Score=131.39 Aligned_cols=331 Identities=10% Similarity=0.008 Sum_probs=189.1
Q ss_pred HHHHHHhhcCCCc-cccccChhhHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcccc
Q 038818 90 LGEMLSSGFNVVG-FNWMSSPAATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRE 168 (486)
Q Consensus 90 ~~~~l~~~~n~~~-~~~~~~~~~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~ 168 (486)
+.++.......+. ..|....+..++.+.+.+++ +|-.... +....+-|.|||.|...++......+.
T Consensus 67 Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~~~---~g~~~~~---~~~~~~qt~ggtga~~~a~~~l~~~~~------ 134 (420)
T 4h51_A 67 VRKAEQLLLDMNLDYEYLPISGYQPFIDEAVKII---YGNTVEL---ENLVAVQTLSGTGAVSLGAKLLTRVFD------ 134 (420)
T ss_dssp HHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHH---HC---CG---GGEEEEEEEHHHHHHHHHHHHHTTTSC------
T ss_pred HHHHHHHHhcCCCCCCCCCcCChHHHHHHHHHHh---cCCCccc---cccceeeecCchHHHHHHHHHHHHhcC------
Confidence 4444444443332 34776667788877776654 3321110 011345688999888777665443211
Q ss_pred CCCCeEEEecCCCchHHHHHHHHcCCCCCCe-EEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc-
Q 038818 169 NISRLVVYGSDQTHSALQKAAQIAGIDPKNF-RAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV- 246 (486)
Q Consensus 169 ~~~~~~v~~s~~~H~s~~~a~~~~G~g~~~v-~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i- 246 (486)
.+++.|++++.++.+....++..|. +. ...+....+++.+|.+.+.+.++..++ ...+++.+.++||||..
T Consensus 135 -~pgd~V~ip~P~w~~y~~i~~~aG~---~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~---~~~vll~~~p~NPtG~~~ 207 (420)
T 4h51_A 135 -AETTPIYLSDPTWPNHYGVVKAAGW---KNICTYAYYDPKTVSLNFEGMKKDILAAPD---GSVFILHQCAHNPTGVDP 207 (420)
T ss_dssp -TTTSCEEEEESCCTHHHHHHHHTTC---CCEEEEECEEGGGTEECHHHHHHHHHHSCS---SCEEEEESSSCTTTCCCC
T ss_pred -CCCCEEEEecCCchhHHHHHHHcCC---eEEEeeccccccccCCCHHHHHHHHhccCC---CcEEEEeCCCCCCCCCCC
Confidence 1677788999999999999999998 64 444443334678899999988875432 34567778899999988
Q ss_pred --CCchHHHHHHHHhCceEEeeccccchhccCccchh-hh-cCCC-CCC-ceeeccccccCCC-CcceEEEeeCchH--H
Q 038818 247 --DPLGPLCDIAKRYSIWVHVDAAYAGSACICPEFRH-FI-DGIE-GAD-SFSLNAHKWFFTT-LDCCCLWVKNPNA--L 317 (486)
Q Consensus 247 --dpl~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~-~~-~~~~-~aD-si~~~~hK~l~~p-~~~g~~~~~~~~~--~ 317 (486)
+.+++|+++|++++++++.|.+|.++......... .. ...+ ... .++.++.|.++.+ .-+|.+.+..+.. .
T Consensus 208 ~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~ 287 (420)
T 4h51_A 208 SQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKR 287 (420)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHH
T ss_pred CHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCHHHH
Confidence 55889999999999999999999775432211100 00 0001 112 3455789987744 4588877654421 1
Q ss_pred HHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHHhc--------hHHHHHHHHHHHHHHHHHHHHHhC
Q 038818 318 IKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRSFG--------VANLRNFLRSHVRMAQLFQELVGG 389 (486)
Q Consensus 318 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g--------~~g~~~~~~~~~~~a~~l~~~L~~ 389 (486)
.+.... -..+.... .+ .............+. .+-++.+.++..++++.|.+.|++
T Consensus 288 ~~~~~~-l~~~~r~~---------------~s-~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~ 350 (420)
T 4h51_A 288 ADVKSV-MDSLIREE---------------YT-CPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELLR 350 (420)
T ss_dssp HHHHHH-HHHHHHTT---------------TS-SCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HHHhhhcc---------------cC-cchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111100 00000000 00 011222222222222 234566777788888999999987
Q ss_pred CC---CeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHH
Q 038818 390 DN---RFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDR 466 (486)
Q Consensus 390 ~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~ 466 (486)
.. .|..+ .++.++++|. +-. .+. .+.|.+.|++ +.+. | |+++. ..+++
T Consensus 351 ~g~~~~~~~i-~~q~GmF~~~--gls------------~e~----v~~L~e~~Vy-~~~~---g----Ris~A--gl~~~ 401 (420)
T 4h51_A 351 LQTPGSWEHV-INQIGMFSFL--GLS------------KAQ----CEYCQNHNIF-ITVS---G----RANMA--GLTHE 401 (420)
T ss_dssp TTCSSCCTHH-HHCCSSEEEC--CCC------------HHH----HHHHHHTTEE-CCTT---C----EEEGG--GCCHH
T ss_pred hCCCCCCCee-cCCCceEEec--CcC------------HHH----HHHHHhCCEE-EcCC---C----EEEec--cCCHH
Confidence 52 12222 2334666652 211 122 2345556753 3332 2 99985 45777
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q 038818 467 HVIAAWKVVQEKLDGILAT 485 (486)
Q Consensus 467 did~~i~~l~~~~~~l~~~ 485 (486)
.|+++.++|.++++++-++
T Consensus 402 ni~~~a~aI~~vvr~i~re 420 (420)
T 4h51_A 402 TALMLAQTINDAVRNVNRE 420 (420)
T ss_dssp HHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHhhcC
Confidence 9999999999999887653
No 235
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.19 E-value=4.9e-15 Score=150.35 Aligned_cols=310 Identities=11% Similarity=-0.052 Sum_probs=169.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEEecCCCchHHHHHH--
Q 038818 112 TELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVYGSDQTHSALQKAA-- 189 (486)
Q Consensus 112 ~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~-- 189 (486)
...+.++.+.|+++++ ..+ ..++++|||+||..|+.++|... + ++.+|......|-+...+.
T Consensus 139 ~~~~~~Lae~L~~~~p-~~~-------~v~~~nSGseA~~~Aik~ar~~t-------g-r~~ii~~~~~yHG~~~~~~sg 202 (465)
T 2yky_A 139 TENEALFAEAVCDRFP-SID-------LVRFTNSGTEANLMALATATAIT-------G-RKTVLAFDGGYHGGLLNFASG 202 (465)
Confidence 4455666677788774 122 57899999999999999887531 0 2333444444554433332
Q ss_pred -HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC----chHHHHHHHHhCceEE
Q 038818 190 -QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP----LGPLCDIAKRYSIWVH 264 (486)
Q Consensus 190 -~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp----l~~I~~i~~~~g~~lh 264 (486)
...|++. .++.+|. .|+++|+++|++.. ..+.+|++....+++|.+-| +++|+++|++||++|+
T Consensus 203 ~~~~g~~~-~~~~~~~-------~d~~~l~~~l~~~~---~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI 271 (465)
T 2yky_A 203 HAPTNAPY-HVVLGVY-------NDVEGTADLLKRHG---HDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLI 271 (465)
Confidence 1122211 2223332 37899999997421 12345666665666897766 9999999999999999
Q ss_pred eeccccchhccCccchhhhcCCCCCCceeeccccccCCCCcceEEEeeCchHHHHHhcCC-cc--cccCccCCCCCccCC
Q 038818 265 VDAAYAGSACICPEFRHFIDGIEGADSFSLNAHKWFFTTLDCCCLWVKNPNALIKALSTN-PE--FLRNKASDSKQVVDY 341 (486)
Q Consensus 265 vD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~~~~~~~~~~~~~~-~~--y~~~~~~~~~~~~~~ 341 (486)
+|++|. + ...+.+.....++ ..|.++ ..|++++..+.|+++.+++ .. +.+... .+ +...
T Consensus 272 ~DEv~~-~-r~g~~~a~~~~gv-~pDi~t--~sK~lg~G~piG~v~~~~~-i~-~~l~~~~~g~~~~~~----------- 333 (465)
T 2yky_A 272 FDEVMT-S-RLSGGGAQEMLGI-SADLTT--LGKYIGGGMSFGAFGGRRD-LM-ERFDPARDGAFAHAG----------- 333 (465)
Confidence 999998 4 2111100001122 356654 5699998777888777654 22 122110 00 1100
Q ss_pred CCccccCCCCCCchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEe--cCCCeeEEEEEeecCCCCCCCC
Q 038818 342 KDWQITLSRRFRALKLWLVLRSFGVANLRNFLRSHVRMAQLFQELVGGDN-RFEIV--APRNFAVVCFRVLPSASGLGDG 418 (486)
Q Consensus 342 ~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~--~~~~~~~v~f~~~~~~~~~~~~ 418 (486)
++ ++.+....+..+++..+-.+ ++.++..++.+++++.|+++. ...+. .+....++.+.+.....+.-.
T Consensus 334 ---T~-~~npla~aAa~aaL~~l~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~- 405 (465)
T 2yky_A 334 ---TF-NNNILTMSAGHAALTQIYTR---QAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAG- 405 (465)
Confidence 11 11111222223344444222 456777788888888887641 12221 123345666655421000000
Q ss_pred CCccchHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHh
Q 038818 419 KANEGANELNRKLLESINASGQLYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGIL 483 (486)
Q Consensus 419 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l~ 483 (486)
.......+...++.+.|.++|+++ .+..+. . ++ ...+++|||+++++|+++++++.
T Consensus 406 ~~~~~d~~~~~~~~~~ll~~GV~v-~p~~~~---~--~s---~~~t~edid~~l~~l~~~l~~~~ 461 (465)
T 2yky_A 406 DVRAADQQLKELFFFHMLRKGIYL-APRGMY---A--LS---LEIADAGRDAFAEALADFIGEQR 461 (465)
Confidence 000000123456777888889754 332221 1 33 35678899999999999887653
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.27 E-value=1.6e-10 Score=125.29 Aligned_cols=329 Identities=12% Similarity=-0.001 Sum_probs=170.9
Q ss_pred HHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHccccC-------CCCeEEEecCCCchHHHHH
Q 038818 116 NIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIGREN-------ISRLVVYGSDQTHSALQKA 188 (486)
Q Consensus 116 ~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~-------~~~~~v~~s~~~H~s~~~a 188 (486)
.++.+.|+++++-+.. ...+|+++||+||..|+.+|+.++....|..+ .+..+|......|-+..-+
T Consensus 427 ~~Lae~L~~~~p~~~l------~~vff~~SGSeA~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~ga 500 (831)
T 4a0g_A 427 LKCAELLLDGVGKGWA------SRVYFSDNGSTAIEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGA 500 (831)
T ss_dssp HHHHHHHHHTTTTTTC------CEEEEESSHHHHHHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHH
T ss_pred HHHHHHHHHhCCCCCC------CEEEECCChhHHHHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceee
Confidence 3455677777753211 15799999999999999999543333222210 1224454566677777777
Q ss_pred HHHcCCCC-----------C--------------CeEEEecCCC------CC-cccC------------------HHHHH
Q 038818 189 AQIAGIDP-----------K--------------NFRAIKTTKS------SS-FTLT------------------PESLQ 218 (486)
Q Consensus 189 ~~~~G~g~-----------~--------------~v~~v~~d~~------~~-~~~d------------------~~~L~ 218 (486)
+...|... . .+..++.... +. -.-| .++|+
T Consensus 501 ls~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le 580 (831)
T 4a0g_A 501 MEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLS 580 (831)
T ss_dssp HHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHH
T ss_pred eeccCccccccccccccccCCccccCCccccccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHH
Confidence 77665310 0 1112222110 00 0001 25677
Q ss_pred HHHHHHH--HCCCccEEEEeecC-CccccccCC----chHHHHHHHHhCceEEeeccccchhccCccchhhhcCCCCCCc
Q 038818 219 AAIDLDI--QAGLIPLFLCATVG-TTAITTVDP----LGPLCDIAKRYSIWVHVDAAYAGSACICPEFRHFIDGIEGADS 291 (486)
Q Consensus 219 ~~l~~~~--~~g~~p~~vv~~~g-tt~~G~idp----l~~I~~i~~~~g~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDs 291 (486)
+.|++.. ..+..+.+|++.-. ....|.+-| +++|.++|++||++|++|+++.|+......+.....++ ..|.
T Consensus 581 ~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv-~PDi 659 (831)
T 4a0g_A 581 KHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGC-KPDI 659 (831)
T ss_dssp HHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSS-CCSE
T ss_pred HHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCC-CCcE
Confidence 7776421 12234556666654 566676654 99999999999999999999876533222221111233 4677
Q ss_pred eeeccccccCCC-CcceEEEeeCchHHHHHhcCCcccccCccCCCCCccCCCCccccCCCCCCchHHHHHHHH---hchH
Q 038818 292 FSLNAHKWFFTT-LDCCCLWVKNPNALIKALSTNPEFLRNKASDSKQVVDYKDWQITLSRRFRALKLWLVLRS---FGVA 367 (486)
Q Consensus 292 i~~~~hK~l~~p-~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~---~g~~ 367 (486)
+| ..|.+++. .+.|.++++++ . .+.+...... ..+....+.....+++.+++.. +-.+
T Consensus 660 it--lsK~L~gG~~Plgav~~~~~-i-~~~~~~~~~~--------------~~~~hg~T~~g~Pla~Aaala~L~~i~~~ 721 (831)
T 4a0g_A 660 AC--FAKLLTGGMVPLAVTLATDA-V-FDSFSGDSKL--------------KALLHGHSYSAHAMGCATAAKAIQWFKDP 721 (831)
T ss_dssp EE--ECGGGGTTSSCCEEEEECHH-H-HHTTCSSCGG--------------GSCCCCCTTTTCHHHHHHHHHHHHHHHCT
T ss_pred EE--EecccccCccCcEEEEECHH-H-HHHHhccccc--------------ccceeecCCcccHHHHHHHHHHHHHHHhh
Confidence 76 46888765 36788888754 2 2233211100 0000011222334444444443 3222
Q ss_pred HHHHHHHHH-HHH----HHHHHHHHhCCCCeEEecCCCeeEEEEEeecCCCCCCCCCCccchHHHHHHHHHHHHhcCcEE
Q 038818 368 NLRNFLRSH-VRM----AQLFQELVGGDNRFEIVAPRNFAVVCFRVLPSASGLGDGKANEGANELNRKLLESINASGQLY 442 (486)
Q Consensus 368 g~~~~~~~~-~~~----a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~ 442 (486)
.+.+.+.+. ..+ .+.+.+.+.+.|.+.-+. ....++.+.+.....+ .........++.+.+.++|+++
T Consensus 722 ~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vr-g~Gl~~~iel~~~~~~------~~~~~~~a~~~~~~l~e~Gv~v 794 (831)
T 4a0g_A 722 ETNHNITSQGKTLRELWDEELVQQISSHSAVQRVV-VIGTLFALELKADASN------SGYASLYAKSLLIMLREDGIFT 794 (831)
T ss_dssp TTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEE-EETTEEEEEEC---------------CHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEe-ecccEEEEEEecCccc------cccchHHHHHHHHHHHHCCcEE
Confidence 221111100 111 223455566666554332 2223455554322100 0000233557788888889743
Q ss_pred EeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 038818 443 VSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEKLDGI 482 (486)
Q Consensus 443 ~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~~~~l 482 (486)
.+. ...+|++. .+.+|++|||++++.|.++++++
T Consensus 795 -~p~----g~~lrl~p-p~~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 795 -RPL----GNVIYLMC-GPCTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp -CCB----TTEEEEEC-CTTCCHHHHHHHHHHHHHHHTTT
T ss_pred -Eec----CCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHh
Confidence 322 25799987 46779999999999999988765
No 237
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=77.71 E-value=10 Score=33.25 Aligned_cols=70 Identities=7% Similarity=0.030 Sum_probs=51.7
Q ss_pred HHHHHHHHc-CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc--CCchHHHHHHHHhC
Q 038818 184 ALQKAAQIA-GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV--DPLGPLCDIAKRYS 260 (486)
Q Consensus 184 s~~~a~~~~-G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i--dpl~~I~~i~~~~g 260 (486)
+++.++.++ .+|...+.++|.. |.-..|+|+..-+.+.++|. .+ -|||.| |.+++|.++|.+.|
T Consensus 146 ~vetAiaml~dmG~~SvKffPm~----Gl~~l~E~~avAka~a~~g~-----~l----EPTGGIdl~N~~~I~~i~l~aG 212 (249)
T 3m0z_A 146 PLETAIALLKDMGGSSIKYFPMG----GLKHRAEFEAVAKACAAHDF-----WL----EPTGGIDLENYSEILKIALDAG 212 (249)
T ss_dssp EHHHHHHHHHHTTCCEEEECCCT----TTTTHHHHHHHHHHHHHTTC-----EE----EEBSSCCTTTHHHHHHHHHHHT
T ss_pred eHHHHHHHHHHcCCCeeeEeecC----CcccHHHHHHHHHHHHHcCc-----eE----CCCCCccHhhHHHHHHHHHHcC
Confidence 466666554 4666688899985 35588999988888888773 22 267877 68999999999998
Q ss_pred ceEEee
Q 038818 261 IWVHVD 266 (486)
Q Consensus 261 ~~lhvD 266 (486)
+..++=
T Consensus 213 v~~viP 218 (249)
T 3m0z_A 213 VSKIIP 218 (249)
T ss_dssp CSCBCC
T ss_pred CCeecc
Confidence 766543
No 238
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=74.76 E-value=17 Score=33.19 Aligned_cols=67 Identities=12% Similarity=0.048 Sum_probs=42.7
Q ss_pred EEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC
Q 038818 174 VVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP 248 (486)
Q Consensus 174 ~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp 248 (486)
.|++....-....+.++-+|- ++..++.| --|.+++++++++..++-..+-++|-++|....+.+.+
T Consensus 55 ~V~i~~r~~~~l~~~~~~~g~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~ 121 (273)
T 4fgs_A 55 RVFITGRRKDVLDAAIAEIGG---GAVGIQAD-----SANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGE 121 (273)
T ss_dssp EEEEEESCHHHHHHHHHHHCT---TCEEEECC-----TTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTS
T ss_pred EEEEEECCHHHHHHHHHHcCC---CeEEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhh
Confidence 344443444456777777776 78888887 34788888888776543223445777777666665544
No 239
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=70.12 E-value=32 Score=30.94 Aligned_cols=68 Identities=13% Similarity=0.061 Sum_probs=42.7
Q ss_pred CeEEEecCCCchHHHHHHH---HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC
Q 038818 172 RLVVYGSDQTHSALQKAAQ---IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD 247 (486)
Q Consensus 172 ~~~v~~s~~~H~s~~~a~~---~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id 247 (486)
+..|++.+..-....+.++ ..|. ++..+++| --|.+++++++++..++...+-++|-++|....+.+.
T Consensus 33 Ga~Vvi~~~~~~~~~~~~~~l~~~g~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~ 103 (255)
T 4g81_D 33 GARVILNDIRATLLAESVDTLTRKGY---DAHGVAFD-----VTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMV 103 (255)
T ss_dssp TCEEEECCSCHHHHHHHHHHHHHTTC---CEEECCCC-----TTCHHHHHHHHHHHHHTTCCCCEEEECCCCCCCCCGG
T ss_pred CCEEEEEECCHHHHHHHHHHHHhcCC---cEEEEEee-----CCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCChh
Confidence 3445555444334444433 3355 78888877 4488999999988776654555677777766655543
No 240
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=66.89 E-value=9.2 Score=33.08 Aligned_cols=53 Identities=19% Similarity=0.122 Sum_probs=43.8
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEe
Q 038818 213 TPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHV 265 (486)
Q Consensus 213 d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhv 265 (486)
..-+-|..++=.+-.|..|..|++..-.+..|.....+++.+++++||+.++.
T Consensus 142 R~GHTEAavdLarLAGl~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 142 RRGHTEAAVQLSTLAGLQPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp CCCHHHHHHHHHHHTTSCSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEEE
T ss_pred CCCcHHHHHHHHHHcCCCceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 44456777777777899999898887767789999999999999999998753
No 241
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=61.84 E-value=46 Score=29.29 Aligned_cols=69 Identities=16% Similarity=0.092 Sum_probs=47.0
Q ss_pred CCeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCch
Q 038818 171 SRLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLG 250 (486)
Q Consensus 171 ~~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~ 250 (486)
++..++.....-+.+...+.++|+ ++.....+ +.++++..+++..++|... |+.. .
T Consensus 107 ~kIavVg~~~~~~~~~~i~~ll~~---~i~~~~~~-------~~ee~~~~i~~l~~~G~~v--VVG~--~---------- 162 (225)
T 2pju_A 107 SSIGVVTYQETIPALVAFQKTFNL---RLDQRSYI-------TEEDARGQINELKANGTEA--VVGA--G---------- 162 (225)
T ss_dssp SCEEEEEESSCCHHHHHHHHHHTC---CEEEEEES-------SHHHHHHHHHHHHHTTCCE--EEES--H----------
T ss_pred CcEEEEeCchhhhHHHHHHHHhCC---ceEEEEeC-------CHHHHHHHHHHHHHCCCCE--EECC--H----------
Confidence 344444444555667888999999 88877764 5778889998888887432 3221 1
Q ss_pred HHHHHHHHhCceE
Q 038818 251 PLCDIAKRYSIWV 263 (486)
Q Consensus 251 ~I~~i~~~~g~~l 263 (486)
-.+++|+++|+.-
T Consensus 163 ~~~~~A~~~Gl~~ 175 (225)
T 2pju_A 163 LITDLAEEAGMTG 175 (225)
T ss_dssp HHHHHHHHTTSEE
T ss_pred HHHHHHHHcCCcE
Confidence 1278999999763
No 242
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=59.93 E-value=52 Score=29.52 Aligned_cols=65 Identities=12% Similarity=-0.022 Sum_probs=36.4
Q ss_pred EEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC
Q 038818 175 VYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD 247 (486)
Q Consensus 175 v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id 247 (486)
|++.........+.++.+|. ++..+..| --|.+.++++++...+....+-+|+-++|....+.+.
T Consensus 54 V~~~~r~~~~~~~~~~~~~~---~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~ 118 (266)
T 3grp_A 54 VGLHGTREDKLKEIAADLGK---DVFVFSAN-----LSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFV 118 (266)
T ss_dssp EEEEESCHHHHHHHHHHHCS---SEEEEECC-----TTSHHHHHHHHHHHHHHHTSCCEEEECCCCC-----C
T ss_pred EEEEeCCHHHHHHHHHHhCC---ceEEEEee-----cCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc
Confidence 33333333445556666676 78888887 3478888888776544322344677777766555443
No 243
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=59.27 E-value=19 Score=31.19 Aligned_cols=53 Identities=21% Similarity=0.166 Sum_probs=43.7
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeecC-CccccccCCchHHHHHHHHhCceEEe
Q 038818 213 TPESLQAAIDLDIQAGLIPLFLCATVG-TTAITTVDPLGPLCDIAKRYSIWVHV 265 (486)
Q Consensus 213 d~~~L~~~l~~~~~~g~~p~~vv~~~g-tt~~G~idpl~~I~~i~~~~g~~lhv 265 (486)
...+-|..++=.+-.|..|..|++... .+..|.....+++.+++++||+.++.
T Consensus 141 R~GhTEaavdLarlAGl~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 141 RPGHTEAAVDLARMAGLQPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALIT 194 (206)
T ss_dssp CCCHHHHHHHHHHHTTSCSBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEEE
T ss_pred CCChHHHHHHHHHHcCCCceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 345677788877788999998888773 56789999999999999999998853
No 244
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=56.26 E-value=36 Score=29.22 Aligned_cols=68 Identities=9% Similarity=0.158 Sum_probs=41.4
Q ss_pred CeEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchH
Q 038818 172 RLVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGP 251 (486)
Q Consensus 172 ~~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~ 251 (486)
+..++.....-+.+...+.++|+ ++.....+ +.++++..+++..++|... |+.. ..
T Consensus 96 kIavvg~~~~~~~~~~~~~ll~~---~i~~~~~~-------~~~e~~~~i~~l~~~G~~v--vVG~--~~---------- 151 (196)
T 2q5c_A 96 ELALIAYKHSIVDKHEIEAMLGV---KIKEFLFS-------SEDEITTLISKVKTENIKI--VVSG--KT---------- 151 (196)
T ss_dssp EEEEEEESSCSSCHHHHHHHHTC---EEEEEEEC-------SGGGHHHHHHHHHHTTCCE--EEEC--HH----------
T ss_pred cEEEEeCcchhhHHHHHHHHhCC---ceEEEEeC-------CHHHHHHHHHHHHHCCCeE--EECC--HH----------
Confidence 33333334444567778888998 77777664 3455677777777776432 2221 11
Q ss_pred HHHHHHHhCceE
Q 038818 252 LCDIAKRYSIWV 263 (486)
Q Consensus 252 I~~i~~~~g~~l 263 (486)
.+++|+++|+.-
T Consensus 152 ~~~~A~~~Gl~~ 163 (196)
T 2q5c_A 152 VTDEAIKQGLYG 163 (196)
T ss_dssp HHHHHHHTTCEE
T ss_pred HHHHHHHcCCcE
Confidence 278888988763
No 245
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=56.05 E-value=62 Score=29.22 Aligned_cols=64 Identities=13% Similarity=0.074 Sum_probs=38.7
Q ss_pred EEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 174 VVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 174 ~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++++. .......+.+..++. ++..++.| --|.+.+++++++..+....+-+++-++|....+.+
T Consensus 54 V~~~~-r~~~~~~~~~~~~~~---~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~ 117 (277)
T 4dqx_A 54 VVVAD-VNEDAAVRVANEIGS---KAFGVRVD-----VSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNV 117 (277)
T ss_dssp EEEEE-SSHHHHHHHHHHHCT---TEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCT
T ss_pred EEEEe-CCHHHHHHHHHHhCC---ceEEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCc
Confidence 34433 334445555555666 78888887 347888888887654432234467777776555544
No 246
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=56.00 E-value=50 Score=29.16 Aligned_cols=65 Identities=20% Similarity=0.056 Sum_probs=38.9
Q ss_pred EEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 174 VVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 174 ~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
.|++.........+.+..+|. ++..+..| --|.+.+++++++..+....+-+++-++|....+.+
T Consensus 32 ~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 96 (247)
T 3rwb_A 32 TVIVSDINAEGAKAAAASIGK---KARAIAAD-----ISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAW 96 (247)
T ss_dssp EEEEECSCHHHHHHHHHHHCT---TEEECCCC-----TTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCG
T ss_pred EEEEEeCCHHHHHHHHHHhCC---ceEEEEcC-----CCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCc
Confidence 344443444455566666666 78888877 347888888887654332234457777776555544
No 247
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=55.60 E-value=8.4 Score=35.91 Aligned_cols=57 Identities=18% Similarity=0.293 Sum_probs=42.7
Q ss_pred CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 209 SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
++.+|.+.+++.++...++|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 26 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 85 (303)
T 2wkj_A 26 QQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIA 85 (303)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 579999999999999888886666666666666666667777777777653 366665
No 248
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=55.24 E-value=59 Score=29.37 Aligned_cols=64 Identities=20% Similarity=0.116 Sum_probs=38.0
Q ss_pred EEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 175 VYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 175 v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
|++.........+.+..+|. ++..++.| --|.+.+++++++..+....+-+++-++|....+.+
T Consensus 56 V~~~~r~~~~~~~~~~~~~~---~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 119 (277)
T 3gvc_A 56 VLCADIDGDAADAAATKIGC---GAAACRVD-----VSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASL 119 (277)
T ss_dssp EEEEESSHHHHHHHHHHHCS---SCEEEECC-----TTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCBCT
T ss_pred EEEEeCCHHHHHHHHHHcCC---cceEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 33333333445555666666 77888877 347888888887654432234467777776555544
No 249
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=54.74 E-value=15 Score=34.24 Aligned_cols=58 Identities=16% Similarity=0.038 Sum_probs=43.0
Q ss_pred CCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 208 SSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 208 ~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
+++.+|.+.+++.++...+.|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 29 ~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 89 (304)
T 3l21_A 29 GDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIA 89 (304)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 3569999999999998888886666666666766666677777777777664 466655
No 250
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=53.01 E-value=79 Score=28.00 Aligned_cols=64 Identities=16% Similarity=0.108 Sum_probs=38.8
Q ss_pred EEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 174 VVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 174 ~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++++. .......+.+..++- ++..++.| --|.+.+++++++..++...+-+|+-++|....+.+
T Consensus 35 V~~~~-r~~~~~~~~~~~~~~---~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~ 98 (259)
T 4e6p_A 35 VAIAD-IDIERARQAAAEIGP---AAYAVQMD-----VTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPI 98 (259)
T ss_dssp EEEEE-SCHHHHHHHHHHHCT---TEEEEECC-----TTCHHHHHHHHHHHHHHSSSCCEEEECCCCCCCBCG
T ss_pred EEEEe-CCHHHHHHHHHHhCC---CceEEEee-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCc
Confidence 34433 334445555566665 77888877 448888888887665443344567777776544433
No 251
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=52.70 E-value=15 Score=32.57 Aligned_cols=70 Identities=9% Similarity=0.120 Sum_probs=50.6
Q ss_pred HHHHHHHHc-CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc--CCchHHHHHHHHhC
Q 038818 184 ALQKAAQIA-GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV--DPLGPLCDIAKRYS 260 (486)
Q Consensus 184 s~~~a~~~~-G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i--dpl~~I~~i~~~~g 260 (486)
+++.++.++ .+|...+.++|.. |.-..|+|+..-+.+.++|. .+ -|||.| |.+++|.++|.+.|
T Consensus 169 ~vetAiaml~dmG~~SvKffPM~----Gl~~leEl~avAkAca~~g~-----~l----EPTGGIdl~Nf~~I~~i~l~aG 235 (275)
T 3m6y_A 169 PIKTAIALVRDMGGNSLKYFPMK----GLAHEEEYRAVAKACAEEGF-----AL----EPTGGIDKENFETIVRIALEAN 235 (275)
T ss_dssp EHHHHHHHHHHHTCCEEEECCCT----TTTTHHHHHHHHHHHHHHTC-----EE----EEBSSCCTTTHHHHHHHHHHTT
T ss_pred eHHHHHHHHHHcCCCeeeEeecC----CcccHHHHHHHHHHHHHcCc-----eE----CCCCCccHhHHHHHHHHHHHcC
Confidence 466666554 3555578889985 35588899888888877763 22 267877 68999999999998
Q ss_pred ceEEee
Q 038818 261 IWVHVD 266 (486)
Q Consensus 261 ~~lhvD 266 (486)
+..++=
T Consensus 236 v~~viP 241 (275)
T 3m6y_A 236 VEQVIP 241 (275)
T ss_dssp CSCBCC
T ss_pred CCeecc
Confidence 766443
No 252
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=52.45 E-value=74 Score=24.14 Aligned_cols=72 Identities=10% Similarity=0.147 Sum_probs=45.9
Q ss_pred CCeEEEecCCCchH--HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC
Q 038818 171 SRLVVYGSDQTHSA--LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP 248 (486)
Q Consensus 171 ~~~~v~~s~~~H~s--~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp 248 (486)
.+.+||....+.+| ........|+ ....+.++.. -|.+++++.+.+.......|.+.+ +....|..|+
T Consensus 17 ~~v~vy~~~~Cp~C~~ak~~L~~~~i---~~~~~dvd~~----~~~~~~~~~l~~~~g~~tvP~vfi---~g~~igG~d~ 86 (114)
T 3h8q_A 17 SRVVIFSKSYCPHSTRVKELFSSLGV---ECNVLELDQV----DDGARVQEVLSEITNQKTVPNIFV---NKVHVGGCDQ 86 (114)
T ss_dssp CSEEEEECTTCHHHHHHHHHHHHTTC---CCEEEETTTS----TTHHHHHHHHHHHHSCCSSCEEEE---TTEEEESHHH
T ss_pred CCEEEEEcCCCCcHHHHHHHHHHcCC---CcEEEEecCC----CChHHHHHHHHHHhCCCccCEEEE---CCEEEeCHHH
Confidence 67788887777777 4555666788 7888888742 256677777766554455675433 3344566666
Q ss_pred chHH
Q 038818 249 LGPL 252 (486)
Q Consensus 249 l~~I 252 (486)
+.++
T Consensus 87 l~~l 90 (114)
T 3h8q_A 87 TFQA 90 (114)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 253
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=51.93 E-value=1.2e+02 Score=26.39 Aligned_cols=44 Identities=18% Similarity=0.051 Sum_probs=30.6
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..+..| --|.+.+++.+++..+....+-+|+-++|....+.+
T Consensus 55 ~~~~~~~D-----~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~ 98 (247)
T 3lyl_A 55 KARGLVLN-----ISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLM 98 (247)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHTTCCCSEEEECCCCCCCCCG
T ss_pred ceEEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCch
Confidence 78888887 348889998888766554445567777776555443
No 254
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=51.86 E-value=18 Score=33.47 Aligned_cols=57 Identities=18% Similarity=0.210 Sum_probs=42.9
Q ss_pred CcccCHHHHHHHHHHHHH-CCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 209 SFTLTPESLQAAIDLDIQ-AGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~-~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
++.+|.+.+++.++...+ .|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 18 dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 78 (293)
T 1f6k_A 18 DGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIA 78 (293)
T ss_dssp TSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 579999999999999888 886666666677777766777777777777653 356554
No 255
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=51.74 E-value=27 Score=30.52 Aligned_cols=52 Identities=17% Similarity=0.123 Sum_probs=41.7
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEe
Q 038818 213 TPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHV 265 (486)
Q Consensus 213 d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhv 265 (486)
...+-|.+++=.+-.|..|..|++..- +..|.....+++.+++++||+.++.
T Consensus 150 R~GhTEAavdLarLAGl~Pa~vicEi~-~~dG~mar~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 150 RGGHTEATIDLMTLAGFKPAGVLCELT-NDDGTMARAPECIEFANKHNMALVT 201 (217)
T ss_dssp CCSHHHHHHHHHHHTTSCSCEEEEEBB-CTTSSBCCHHHHHHHHHHTTCEEEE
T ss_pred CCCcHHHHHHHHHHcCCCceEEEEEEe-CCCCCccCHHHHHHHHHHcCCCEEE
Confidence 345567777777778999988887765 5679999999999999999997753
No 256
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=51.67 E-value=6.6 Score=36.59 Aligned_cols=57 Identities=12% Similarity=0.068 Sum_probs=41.0
Q ss_pred CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 209 SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
++.+|.+.+++.++...+.|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 86 (301)
T 1xky_A 27 NGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIA 86 (301)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEe
Confidence 579999999999998888886655566666666666667777777776653 355554
No 257
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=51.16 E-value=20 Score=33.41 Aligned_cols=58 Identities=12% Similarity=0.068 Sum_probs=45.5
Q ss_pred CCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh--CceEEe
Q 038818 208 SSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY--SIWVHV 265 (486)
Q Consensus 208 ~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~--g~~lhv 265 (486)
.++.+|.+.+++.++...++|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 22 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpVia 81 (313)
T 3dz1_A 22 DDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIV 81 (313)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 3579999999999999988887666666777777777777778888877765 466666
No 258
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=50.98 E-value=13 Score=34.68 Aligned_cols=61 Identities=23% Similarity=0.103 Sum_probs=47.1
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 203 KTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 203 ~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
|.++ ++.+|.+.+++.++...++|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 19 Pf~~--dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 82 (309)
T 3fkr_A 19 TFAD--TGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIV 82 (309)
T ss_dssp CBCT--TSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCc--CCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 5554 569999999999999888887777777777877777778888888887664 355554
No 259
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=50.16 E-value=62 Score=28.73 Aligned_cols=64 Identities=11% Similarity=0.076 Sum_probs=37.6
Q ss_pred EEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 174 VVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 174 ~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
+++++ .......+....+|. ++..++.| --|.+.++++++...+....+-+++-++|....+.+
T Consensus 35 V~~~~-r~~~~~~~~~~~~~~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 98 (255)
T 4eso_A 35 VLLTG-RNESNIARIREEFGP---RVHALRSD-----IADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPF 98 (255)
T ss_dssp EEEEE-SCHHHHHHHHHHHGG---GEEEEECC-----TTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCBCG
T ss_pred EEEEe-CCHHHHHHHHHHhCC---cceEEEcc-----CCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCh
Confidence 44443 334445555555665 78888887 347888887776654332234456667766554433
No 260
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=49.19 E-value=1.2e+02 Score=27.06 Aligned_cols=65 Identities=12% Similarity=0.071 Sum_probs=37.3
Q ss_pred EEEecCCCchHHHHHHHH---cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 174 VVYGSDQTHSALQKAAQI---AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 174 ~v~~s~~~H~s~~~a~~~---~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
.|++....-....+.++. .|. ++..+..| --|.+.+++++++..+....+-+|+-++|....+.+
T Consensus 52 ~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~ 119 (271)
T 4ibo_A 52 RILINGTDPSRVAQTVQEFRNVGH---DAEAVAFD-----VTSESEIIEAFARLDEQGIDVDILVNNAGIQFRKPM 119 (271)
T ss_dssp EEEECCSCHHHHHHHHHHHHHTTC---CEEECCCC-----TTCHHHHHHHHHHHHHHTCCCCEEEECCCCCCCCCG
T ss_pred EEEEEeCCHHHHHHHHHHHHhcCC---ceEEEEcC-----CCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCc
Confidence 344443333334443332 354 77888776 448888888887765443345567777775544433
No 261
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=49.16 E-value=31 Score=30.32 Aligned_cols=52 Identities=10% Similarity=0.013 Sum_probs=42.5
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEe
Q 038818 213 TPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHV 265 (486)
Q Consensus 213 d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhv 265 (486)
..-+-|..++=.+-.|..|..|++..- +..|.....+++.+++++||+.++.
T Consensus 161 R~GHTEaaVdLarlAGl~Pa~VicEi~-~ddG~mar~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 161 RQGHTEMTVALAELANLVPITTICEMM-GDDGNAMSKNETKRYAEKHNLIYLS 212 (227)
T ss_dssp CCSHHHHHHHHHHHTTSCSEEEEEEEB-CTTSSBCCHHHHHHHHHHHTCCEEE
T ss_pred CCCchHHHHHHHHHcCCCceEEEEEEe-CCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 445677777777778999988888776 4569999999999999999998854
No 262
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=48.82 E-value=18 Score=33.70 Aligned_cols=61 Identities=7% Similarity=-0.061 Sum_probs=45.4
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 203 KTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 203 ~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
|.++ ++.+|.+.+++.++...+.|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 25 Pf~~--dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 88 (307)
T 3s5o_A 25 PFTA--TAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLA 88 (307)
T ss_dssp CBCT--TSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEE
T ss_pred cCCC--CCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEE
Confidence 4443 569999999999998888876666666777777777777788888888775 356555
No 263
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=47.98 E-value=97 Score=27.43 Aligned_cols=45 Identities=18% Similarity=0.133 Sum_probs=28.6
Q ss_pred CCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 197 KNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 197 ~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
.++..++.|- -|.+.+++++++..++...+-+|+.++|....+.+
T Consensus 73 ~~~~~~~~Dl-----~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~ 117 (266)
T 3o38_A 73 GRVEAVVCDV-----TSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPV 117 (266)
T ss_dssp SCEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred CceEEEEeCC-----CCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCc
Confidence 3788888873 47888888887654432234467777775554443
No 264
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=47.79 E-value=16 Score=33.94 Aligned_cols=57 Identities=19% Similarity=0.212 Sum_probs=42.0
Q ss_pred CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 209 SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
++.+|.+.+++.++...+.|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 22 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 81 (297)
T 3flu_A 22 DGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIA 81 (297)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 579999999999998888886666666666666666667777777777653 356655
No 265
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=47.58 E-value=22 Score=33.87 Aligned_cols=58 Identities=19% Similarity=0.135 Sum_probs=42.7
Q ss_pred CCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 208 SSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 208 ~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
.++.+|.+.+++.++...++|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 73 ~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 133 (360)
T 4dpp_A 73 PDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIG 133 (360)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 3679999999999998888886666666666766666667777777766553 366665
No 266
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=47.01 E-value=19 Score=34.04 Aligned_cols=57 Identities=12% Similarity=-0.046 Sum_probs=41.4
Q ss_pred CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 209 SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
++.+|.+.+++.++...+.|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 49 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 108 (332)
T 2r8w_A 49 AGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMA 108 (332)
T ss_dssp TCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 569999999999998888776655566666666666667777777776654 366655
No 267
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=46.70 E-value=17 Score=33.64 Aligned_cols=51 Identities=12% Similarity=-0.010 Sum_probs=39.8
Q ss_pred CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh
Q 038818 209 SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY 259 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~ 259 (486)
++.+|.+.+++.++...+.|..-+++..+.|...+-+.+.-.++.+.+.+.
T Consensus 18 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~ 68 (294)
T 3b4u_A 18 DGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAA 68 (294)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHT
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 579999999999999888886666666666666666667777888877764
No 268
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=45.82 E-value=70 Score=27.94 Aligned_cols=64 Identities=19% Similarity=0.193 Sum_probs=34.4
Q ss_pred EEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 174 VVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 174 ~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
+++++. .-....+....++- .+..+..| --|.+.+++++++..+....+-+++-++|....+.+
T Consensus 30 V~~~~r-~~~~~~~~~~~~~~---~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~ 93 (235)
T 3l6e_A 30 VSMMGR-RYQRLQQQELLLGN---AVIGIVAD-----LAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPV 93 (235)
T ss_dssp EEEEES-CHHHHHHHHHHHGG---GEEEEECC-----TTSHHHHHHHHHHHHHHHCSCSEEEEECCCC-----
T ss_pred EEEEEC-CHHHHHHHHHHhcC---CceEEECC-----CCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCh
Confidence 444443 33345555555554 67788876 347888888877654432234467777776554443
No 269
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=45.70 E-value=14 Score=34.52 Aligned_cols=58 Identities=10% Similarity=0.130 Sum_probs=43.4
Q ss_pred CCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 208 SSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 208 ~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
+++.+|.+.+++.++...+.|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 36 ~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 96 (315)
T 3si9_A 36 DNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVA 96 (315)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3679999999999999888886666666666766666677777788877664 355555
No 270
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=45.58 E-value=1e+02 Score=27.61 Aligned_cols=44 Identities=11% Similarity=-0.010 Sum_probs=27.7
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..+..| --|.+.++++++...+....+-+++-++|....+.+
T Consensus 54 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~ 97 (264)
T 3tfo_A 54 TALAQVLD-----VTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPL 97 (264)
T ss_dssp EEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred cEEEEEcC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 67778776 347888888877654432234467777776555443
No 271
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=45.42 E-value=1.3e+02 Score=26.40 Aligned_cols=66 Identities=15% Similarity=0.037 Sum_probs=35.1
Q ss_pred EEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 174 VVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 174 ~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
+++++. .-....+....+.-...++..+..| --|.+.+++++++..+....+-+++-++|....+.
T Consensus 33 V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~ 98 (257)
T 3imf_A 33 VVITGR-TKEKLEEAKLEIEQFPGQILTVQMD-----VRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICP 98 (257)
T ss_dssp EEEEES-CHHHHHHHHHHHCCSTTCEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred EEEEeC-CHHHHHHHHHHHHhcCCcEEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 444442 3333444444432212278888877 34788888888765443223445666666544443
No 272
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=45.27 E-value=1.1e+02 Score=26.87 Aligned_cols=43 Identities=9% Similarity=-0.025 Sum_probs=28.9
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..++.| --|.+.++++++...+. ..+-+++-++|....+.+
T Consensus 57 ~~~~~~~D-----v~~~~~v~~~~~~~~~~-g~id~lv~nAg~~~~~~~ 99 (252)
T 3h7a_A 57 RIVARSLD-----ARNEDEVTAFLNAADAH-APLEVTIFNVGANVNFPI 99 (252)
T ss_dssp EEEEEECC-----TTCHHHHHHHHHHHHHH-SCEEEEEECCCCCCCCCG
T ss_pred eEEEEECc-----CCCHHHHHHHHHHHHhh-CCceEEEECCCcCCCCCc
Confidence 78888887 34788888888776554 345567777776554443
No 273
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=45.04 E-value=15 Score=33.93 Aligned_cols=51 Identities=12% Similarity=0.104 Sum_probs=39.4
Q ss_pred CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh
Q 038818 209 SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY 259 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~ 259 (486)
++.+|.+.+++.++...++|..-+++..+.|...+-+.+.-.++.+.+.+.
T Consensus 14 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~ 64 (288)
T 2nuw_A 14 QGKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDV 64 (288)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTT
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 579999999999999888886655566666666666667777888877764
No 274
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=44.71 E-value=15 Score=33.87 Aligned_cols=57 Identities=14% Similarity=0.145 Sum_probs=41.8
Q ss_pred CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 209 SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
++.+|.+.+++.++...+.|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 16 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (291)
T 3tak_A 16 DGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIA 75 (291)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 579999999999998888776656666666666666667777777777654 355555
No 275
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=44.11 E-value=89 Score=27.48 Aligned_cols=64 Identities=20% Similarity=0.159 Sum_probs=36.1
Q ss_pred EEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 175 VYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 175 v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
|++.........+....++- ++..+++| --|.+.+++++++..++...+-+++-++|....+.+
T Consensus 36 V~~~~r~~~~~~~~~~~~~~---~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~ 99 (248)
T 3op4_A 36 VIGTATSESGAQAISDYLGD---NGKGMALN-----VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLL 99 (248)
T ss_dssp EEEEESSHHHHHHHHHHHGG---GEEEEECC-----TTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCG
T ss_pred EEEEeCCHHHHHHHHHHhcc---cceEEEEe-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 33333333445555555555 56777776 347888888887654432223456667765554433
No 276
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=44.04 E-value=1.6e+02 Score=25.70 Aligned_cols=64 Identities=11% Similarity=-0.020 Sum_probs=35.6
Q ss_pred EEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 174 VVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 174 ~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++++.. .-....+....+|. ++..++.| --|.+.++++++...+....+-+|+-++|....+.+
T Consensus 33 V~~~~r-~~~~~~~~~~~~~~---~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~ 96 (253)
T 1hxh_A 33 VAFSDI-NEAAGQQLAAELGE---RSMFVRHD-----VSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDM 96 (253)
T ss_dssp EEEECS-CHHHHHHHHHHHCT---TEEEECCC-----TTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCT
T ss_pred EEEEeC-CHHHHHHHHHHcCC---ceEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 444443 22334444444455 78888776 347888888887654322223456666665544433
No 277
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=43.62 E-value=16 Score=34.15 Aligned_cols=58 Identities=21% Similarity=0.158 Sum_probs=42.8
Q ss_pred CCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 208 SSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 208 ~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
.++.+|.+.+++.++...+.|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 37 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 97 (314)
T 3qze_A 37 AQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIA 97 (314)
T ss_dssp TTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3579999999999998888776666666677777766777777777776654 356655
No 278
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=43.55 E-value=19 Score=33.61 Aligned_cols=58 Identities=16% Similarity=0.118 Sum_probs=44.0
Q ss_pred CCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 208 SSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 208 ~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
+++.+|.+.+++.++...+.|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 38 ~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 98 (315)
T 3na8_A 38 ADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIV 98 (315)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3679999999999999888887666666677777766777777888877664 355555
No 279
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=43.44 E-value=24 Score=32.77 Aligned_cols=57 Identities=18% Similarity=0.094 Sum_probs=41.6
Q ss_pred CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 209 SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
++.+|.+.+++.++...+.|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 31 dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 90 (304)
T 3cpr_A 31 SGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIA 90 (304)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEe
Confidence 579999999999998888886655566666666666667777777777653 356554
No 280
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=43.23 E-value=27 Score=33.14 Aligned_cols=57 Identities=18% Similarity=0.089 Sum_probs=39.6
Q ss_pred CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEe
Q 038818 209 SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHV 265 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhv 265 (486)
++.+|.+.+++.++...+.|..-+++..+.|...+-+.+.-.++.+.+-.-.+.+++
T Consensus 41 dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpVia 97 (344)
T 2hmc_A 41 DRTPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVIV 97 (344)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEEE
Confidence 579999999999998888886666666666666666666666666662223455544
No 281
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=42.86 E-value=1.2e+02 Score=27.02 Aligned_cols=58 Identities=14% Similarity=-0.003 Sum_probs=35.3
Q ss_pred CchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 181 THSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 181 ~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
......+.....+- ++..+..| --|.+.+++++++..+....+-+|+-++|....+.+
T Consensus 38 ~~~~~~~~~~~~~~---~~~~~~~D-----v~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~ 95 (281)
T 3m1a_A 38 RTEALDDLVAAYPD---RAEAISLD-----VTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAF 95 (281)
T ss_dssp SGGGGHHHHHHCTT---TEEEEECC-----TTCHHHHHHHHHHHHHHHSCCSEEEECCCCEEECCT
T ss_pred CHHHHHHHHHhccC---CceEEEee-----CCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCh
Confidence 33345555555555 78888876 347888888877654332234467777776655544
No 282
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=42.79 E-value=1.2e+02 Score=27.21 Aligned_cols=59 Identities=22% Similarity=0.192 Sum_probs=35.0
Q ss_pred EEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCc
Q 038818 174 VVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTT 241 (486)
Q Consensus 174 ~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt 241 (486)
++++. .......+.+..++. ++..++.| --|.+.+++++++..+....+-+++-++|..
T Consensus 55 V~~~~-r~~~~~~~~~~~~~~---~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~ 113 (272)
T 4dyv_A 55 VALAG-RRLDALQETAAEIGD---DALCVPTD-----VTDPDSVRALFTATVEKFGRVDVLFNNAGTG 113 (272)
T ss_dssp EEEEE-SCHHHHHHHHHHHTS---CCEEEECC-----TTSHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred EEEEE-CCHHHHHHHHHHhCC---CeEEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 44443 333445566666665 77888877 3478888888776543322344566666654
No 283
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=42.77 E-value=21 Score=33.88 Aligned_cols=61 Identities=21% Similarity=0.126 Sum_probs=42.8
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 203 KTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 203 ~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
|.++ ++.+|.+.+++.++...+.|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 42 PF~~--dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 105 (343)
T 2v9d_A 42 IFTA--DGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLI 105 (343)
T ss_dssp CBCT--TSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCC--CCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4443 569999999999998888876666666666666666667777777776653 355544
No 284
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=42.16 E-value=1.2e+02 Score=26.76 Aligned_cols=59 Identities=15% Similarity=0.086 Sum_probs=35.4
Q ss_pred EEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCc
Q 038818 174 VVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTT 241 (486)
Q Consensus 174 ~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt 241 (486)
+++++ .......+.+..++. ++..+..|- -|.+.+++++++..+....+-+|+-++|..
T Consensus 36 V~~~~-r~~~~~~~~~~~~~~---~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~id~li~~Ag~~ 94 (261)
T 3n74_A 36 VVIVD-RDKAGAERVAGEIGD---AALAVAADI-----SKEADVDAAVEAALSKFGKVDILVNNAGIG 94 (261)
T ss_dssp EEEEE-SCHHHHHHHHHHHCT---TEEEEECCT-----TSHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred EEEEc-CCHHHHHHHHHHhCC---ceEEEEecC-----CCHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 44443 334455666666666 788888873 477888887776543322344566666644
No 285
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=41.43 E-value=22 Score=32.82 Aligned_cols=57 Identities=16% Similarity=0.153 Sum_probs=40.5
Q ss_pred CCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 208 SSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 208 ~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
+++ +|.+.+++.++...++|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 16 ~dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~ 75 (291)
T 3a5f_A 16 NTG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIA 75 (291)
T ss_dssp SSS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 367 999999999998888876655666666666666667777777776653 355543
No 286
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=41.02 E-value=1.2e+02 Score=27.20 Aligned_cols=44 Identities=9% Similarity=0.045 Sum_probs=28.2
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..+..| --|.+.+++++++..+....+-+|+-++|....+.+
T Consensus 74 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 117 (279)
T 3sju_A 74 DVDGSSCD-----VTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGET 117 (279)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCSCG
T ss_pred cEEEEECC-----CCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCh
Confidence 78888877 347888888887654432234467777776555444
No 287
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=40.88 E-value=23 Score=32.71 Aligned_cols=57 Identities=19% Similarity=0.185 Sum_probs=40.5
Q ss_pred CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 209 SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
++.+|.+.+++.++...+.|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 16 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (292)
T 2ojp_A 16 KGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIA 75 (292)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 569999999999998887776555566666666666667777777776653 355544
No 288
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=40.76 E-value=1.8e+02 Score=26.29 Aligned_cols=68 Identities=16% Similarity=0.138 Sum_probs=37.2
Q ss_pred EEEecCCCchHHHHHHHHc-CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC
Q 038818 174 VVYGSDQTHSALQKAAQIA-GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD 247 (486)
Q Consensus 174 ~v~~s~~~H~s~~~a~~~~-G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id 247 (486)
++++... -....+.+..+ ..+..++..+..| --|.+.+++++++..++-..+-+|+-++|....+.+.
T Consensus 68 V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~ 136 (293)
T 3rih_A 68 VAVAARS-PRELSSVTAELGELGAGNVIGVRLD-----VSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLD 136 (293)
T ss_dssp EEEEESS-GGGGHHHHHHHTTSSSSCEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTT
T ss_pred EEEEECC-HHHHHHHHHHHHhhCCCcEEEEEEe-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc
Confidence 4444433 33344444333 2232378888877 3478888888776544322344577777766555443
No 289
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=40.63 E-value=25 Score=32.38 Aligned_cols=51 Identities=16% Similarity=0.094 Sum_probs=39.1
Q ss_pred CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh
Q 038818 209 SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY 259 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~ 259 (486)
++.+|.+.+++.++...+.|..-+++..+.|...+-+.+.-.++.+.+.+.
T Consensus 14 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~ 64 (293)
T 1w3i_A 14 DNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDV 64 (293)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTT
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 579999999999999888886555566666666666667777888877764
No 290
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=40.08 E-value=98 Score=29.70 Aligned_cols=60 Identities=15% Similarity=0.098 Sum_probs=43.3
Q ss_pred cCHHHHHHHHHHHHHCCCccEEEEeecCCccccc----cCCchHHHHHHHHhCceEEeeccccch
Q 038818 212 LTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT----VDPLGPLCDIAKRYSIWVHVDAAYAGS 272 (486)
Q Consensus 212 ~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~----idpl~~I~~i~~~~g~~lhvD~a~g~~ 272 (486)
.++++++.+++.-...|...+ +++-.|++..-. .-++..|..+.+.+++.+++|.+|+++
T Consensus 260 ~t~~e~~~Ave~i~~~Gn~~i-~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~G 323 (385)
T 3nvt_A 260 ATIEEFIGAAEYIMSQGNGKI-ILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTG 323 (385)
T ss_dssp CCHHHHHHHHHHHHTTTCCCE-EEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHHC
T ss_pred CCHHHHHHHHHHHHHcCCCeE-EEEECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCCC
Confidence 799999999988777776553 444443332211 237888888888899999999999764
No 291
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=39.65 E-value=1e+02 Score=27.57 Aligned_cols=38 Identities=11% Similarity=0.153 Sum_probs=25.2
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCC
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGT 240 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gt 240 (486)
++..+++| --|.+++++++++..++-..+-++|-++|.
T Consensus 57 ~~~~~~~D-----vt~~~~v~~~~~~~~~~~G~iDiLVNNAGi 94 (254)
T 4fn4_A 57 EVLGVKAD-----VSKKKDVEEFVRRTFETYSRIDVLCNNAGI 94 (254)
T ss_dssp CEEEEECC-----TTSHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred cEEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence 88888887 348888888887765442233356666663
No 292
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=39.37 E-value=20 Score=33.49 Aligned_cols=57 Identities=11% Similarity=0.110 Sum_probs=39.0
Q ss_pred CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 209 SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
++.+|.+.+++.++...+.|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpVia 86 (314)
T 3d0c_A 27 TREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVA 86 (314)
T ss_dssp TCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEe
Confidence 569999999999998888775544444555555555556666777766653 356655
No 293
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=39.32 E-value=1.5e+02 Score=26.26 Aligned_cols=81 Identities=15% Similarity=0.040 Sum_probs=54.0
Q ss_pred eEEEecCCCchH-HHHHHHHcCCCCCCeEEEecCCC------CCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 173 LVVYGSDQTHSA-LQKAAQIAGIDPKNFRAIKTTKS------SSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 173 ~~v~~s~~~H~s-~~~a~~~~G~g~~~v~~v~~d~~------~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
.+.+..+..+.. +....+..+. .+..+|+... +.+.|++++..++++.-. |..++.++-.+..-.
T Consensus 162 ~i~~~GDt~~~~~~~~~~~~~~~---Dv~il~~g~~~~~~~~~~~hm~~~ea~~~~~~l~-----~~~vi~~H~~~~~~~ 233 (264)
T 3rpc_A 162 TVYLVGDTVWTSDVEKALLRFDP---NVIIMNTGYAQILGFEDSIIMGTKDIGRMVVRKP-----EAKIIAVHMDTVNHT 233 (264)
T ss_dssp CEEECCSCCSCHHHHHHHHHHCC---SEEEEECSCBCBTTCSSCSSCCHHHHHHHHHHCT-----TSEEEEESCSSSTTB
T ss_pred EEEEECCcCchHHHHHHHHHhCC---CEEEEecCccccccccCCcccCHHHHHHHHHhCC-----cCeEEEEcccccccc
Confidence 344455555543 5555666777 8888887621 257999998888875432 346888876554334
Q ss_pred cCCchHHHHHHHHhCc
Q 038818 246 VDPLGPLCDIAKRYSI 261 (486)
Q Consensus 246 idpl~~I~~i~~~~g~ 261 (486)
-.+.+++.+.+++.|+
T Consensus 234 ~~~~~~l~~~~~~~g~ 249 (264)
T 3rpc_A 234 ATSRKDVRKFIKGNNI 249 (264)
T ss_dssp CSCHHHHHHHHHHTTC
T ss_pred ccCHHHHHHHHHHcCC
Confidence 4678899999988775
No 294
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=39.16 E-value=24 Score=32.74 Aligned_cols=57 Identities=19% Similarity=0.172 Sum_probs=42.3
Q ss_pred CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh----CceEEe
Q 038818 209 SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY----SIWVHV 265 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~----g~~lhv 265 (486)
++.+|.+.+++.++...+.|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 22 dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpvia 82 (301)
T 3m5v_A 22 NGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLA 82 (301)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 569999999999998888886655566666666666667777777777654 467766
No 295
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=38.83 E-value=1.3e+02 Score=27.32 Aligned_cols=44 Identities=5% Similarity=-0.062 Sum_probs=28.3
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..+.+| --|.+.+++++++..+....+-+|+-++|....+.+
T Consensus 81 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~ 124 (301)
T 3tjr_A 81 DAHGVVCD-----VRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPL 124 (301)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCG
T ss_pred ceEEEEcc-----CCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCc
Confidence 78888887 347888888887654332234467777776655544
No 296
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=38.79 E-value=1.8e+02 Score=25.64 Aligned_cols=43 Identities=5% Similarity=-0.029 Sum_probs=27.7
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
++..+..| --|.+.++++++...+....+-+++-++|....+.
T Consensus 55 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~ 97 (258)
T 3oid_A 55 KVLVVKAN-----VGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRP 97 (258)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSC
T ss_pred cEEEEEcC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 78888887 34788888888765443223446777776544443
No 297
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=38.52 E-value=18 Score=33.90 Aligned_cols=57 Identities=18% Similarity=0.114 Sum_probs=43.7
Q ss_pred CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 209 SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
++.+|.+.+++.++...+.|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 26 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 85 (318)
T 3qfe_A 26 TDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMA 85 (318)
T ss_dssp TTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 569999999999998888887666677777777777777777888877664 356655
No 298
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=38.45 E-value=23 Score=33.07 Aligned_cols=57 Identities=12% Similarity=0.066 Sum_probs=42.4
Q ss_pred CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 209 SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
++.+|.+.+++.++...+.|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 22 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpVia 81 (311)
T 3h5d_A 22 DGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIA 81 (311)
T ss_dssp TSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 568999999999988888886666666777777776777777788877665 355554
No 299
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=38.40 E-value=1.9e+02 Score=25.92 Aligned_cols=62 Identities=11% Similarity=-0.061 Sum_probs=33.7
Q ss_pred EEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCc
Q 038818 174 VVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTT 241 (486)
Q Consensus 174 ~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt 241 (486)
++++. ..-....+.+..+.-...++..++.| --|.+.+++++++..+....+-+++-++|..
T Consensus 55 V~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~ 116 (283)
T 3v8b_A 55 VGALG-RTRTEVEEVADEIVGAGGQAIALEAD-----VSDELQMRNAVRDLVLKFGHLDIVVANAGIN 116 (283)
T ss_dssp EEEEE-SSHHHHHHHHHHHTTTTCCEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred EEEEe-CCHHHHHHHHHHHHhcCCcEEEEEcc-----CCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 44443 33334444444432111278888887 3478888888876544322344566666643
No 300
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=37.78 E-value=13 Score=36.86 Aligned_cols=31 Identities=16% Similarity=0.116 Sum_probs=28.0
Q ss_pred CCccccccCCchHHHHHHHHhCceEEeeccc
Q 038818 239 GTTAITTVDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 239 gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
..+..|..++++++++-|+++|+.+++|.++
T Consensus 69 i~~~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 99 (496)
T 4gqr_A 69 LCTRSGNEDEFRNMVTRCNNVGVRIYVDAVI 99 (496)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred eCCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 4567899999999999999999999999875
No 301
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=37.49 E-value=49 Score=29.15 Aligned_cols=52 Identities=15% Similarity=0.141 Sum_probs=41.2
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeecCCcc-----------ccccCCchHHHHHHHHhCceEEe
Q 038818 213 TPESLQAAIDLDIQAGLIPLFLCATVGTTA-----------ITTVDPLGPLCDIAKRYSIWVHV 265 (486)
Q Consensus 213 d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~-----------~G~idpl~~I~~i~~~~g~~lhv 265 (486)
..-+-|.+++=.+-.|..|..|++..- +. .|.....+++.+++++||+.++.
T Consensus 150 R~GHTEAaVDLarLAGl~PagVicEi~-~~~~~~~~~~~~~dG~mar~~~l~~fA~~h~L~iit 212 (233)
T 1k4i_A 150 RRGHTEAGVELCRLAGKRPVAVISEIV-DDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVCT 212 (233)
T ss_dssp CCSHHHHHHHHHHHTTCCSBEEEEEBE-ECCEECTTSSCEESCEECCHHHHHHHHHHTTCEEEE
T ss_pred cCChHHHHHHHHHHcCCCceEEEEEeC-CCcccccccccCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 344567777777778999988887665 33 68999999999999999998854
No 302
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=37.30 E-value=15 Score=34.09 Aligned_cols=57 Identities=16% Similarity=0.031 Sum_probs=41.5
Q ss_pred CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 209 SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
++.+|.+.+++.++...++|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 19 dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 78 (300)
T 3eb2_A 19 EGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVA 78 (300)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 569999999999999888886555566666666666667777777777664 355554
No 303
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=36.66 E-value=22 Score=33.22 Aligned_cols=50 Identities=6% Similarity=0.066 Sum_probs=29.9
Q ss_pred CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHH
Q 038818 209 SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKR 258 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~ 258 (486)
++.+|.+.+++.++...+.|..-+++..+.|..++-+.+.-.++.+.+.+
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~ 76 (316)
T 3e96_A 27 DGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVE 76 (316)
T ss_dssp TCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHH
Confidence 45777777777777776666544444444454454455555566665554
No 304
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=36.16 E-value=2.2e+02 Score=25.00 Aligned_cols=62 Identities=3% Similarity=-0.055 Sum_probs=31.7
Q ss_pred eEEEecCCCchHHHHHHHHc-CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCC
Q 038818 173 LVVYGSDQTHSALQKAAQIA-GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGT 240 (486)
Q Consensus 173 ~~v~~s~~~H~s~~~a~~~~-G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gt 240 (486)
.++++.. .-....+..+.+ ..+..++..+++| --|.+++++++++..++-..+-.++-++|.
T Consensus 34 ~Vvi~~r-~~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~G~iD~lvnnAg~ 96 (256)
T 4fs3_A 34 KLVFTYR-KERSRKELEKLLEQLNQPEAHLYQID-----VQSDEEVINGFEQIGKDVGNIDGVYHSIAF 96 (256)
T ss_dssp EEEEEES-SGGGHHHHHHHHGGGTCSSCEEEECC-----TTCHHHHHHHHHHHHHHHCCCSEEEECCCC
T ss_pred EEEEEEC-CHHHHHHHHHHHHhcCCCcEEEEEcc-----CCCHHHHHHHHHHHHHHhCCCCEEEecccc
Confidence 3444443 333344443332 2233367888887 347888888887654432222245555553
No 305
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=35.95 E-value=1.5e+02 Score=23.02 Aligned_cols=72 Identities=14% Similarity=0.042 Sum_probs=40.5
Q ss_pred CCeEEEecCCCchHH---HHHHHHcC---CCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 171 SRLVVYGSDQTHSAL---QKAAQIAG---IDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 171 ~~~~v~~s~~~H~s~---~~a~~~~G---~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
.+.++|....+.+|. .......| + .+..++++.+. +-.++.+.+.+.......|.+ ...| ...|
T Consensus 37 ~~Vvvy~~~~Cp~C~~a~k~~L~~~~~~~i---~~~~vdvd~~~----~~~~~~~~L~~~~g~~tVP~v--fi~g-~~ig 106 (129)
T 3ctg_A 37 KEVFVAAKTYCPYCKATLSTLFQELNVPKS---KALVLELDEMS----NGSEIQDALEEISGQKTVPNV--YING-KHIG 106 (129)
T ss_dssp SSEEEEECTTCHHHHHHHHHHHTTSCCCGG---GEEEEEGGGST----THHHHHHHHHHHHSCCSSCEE--EETT-EEEE
T ss_pred CCEEEEECCCCCchHHHHHHHHHhcCccCC---CcEEEEccccC----CHHHHHHHHHHHhCCCCCCEE--EECC-EEEc
Confidence 567888887777774 33344445 5 67788876422 334555666655544456753 2223 3345
Q ss_pred ccCCchHH
Q 038818 245 TVDPLGPL 252 (486)
Q Consensus 245 ~idpl~~I 252 (486)
..|++.++
T Consensus 107 G~d~l~~l 114 (129)
T 3ctg_A 107 GNSDLETL 114 (129)
T ss_dssp SHHHHHHH
T ss_pred CHHHHHHH
Confidence 55555443
No 306
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=35.37 E-value=2.3e+02 Score=24.82 Aligned_cols=42 Identities=10% Similarity=-0.020 Sum_probs=25.3
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
++..++.| --|.+.+++++++..+....+-+++-++|....+
T Consensus 56 ~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~ 97 (260)
T 1x1t_A 56 KVLYDGAD-----LSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTA 97 (260)
T ss_dssp CEEEECCC-----TTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCC
T ss_pred cEEEEECC-----CCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 77788776 3478888888776433211233566666654433
No 307
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=35.31 E-value=1.1e+02 Score=27.62 Aligned_cols=62 Identities=16% Similarity=0.065 Sum_probs=41.4
Q ss_pred cCHHHHHHHHHHHHHCCCccEEEEeecCCcccc-cc--CCchHHHHHHHHhCceEEeeccccchh
Q 038818 212 LTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT-TV--DPLGPLCDIAKRYSIWVHVDAAYAGSA 273 (486)
Q Consensus 212 ~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G-~i--dpl~~I~~i~~~~g~~lhvD~a~g~~~ 273 (486)
.+++++..+++.....|...+.++--.+++..+ .. -++..|..+.+.+++.+++|..|+.+.
T Consensus 141 ~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~ 205 (262)
T 1zco_A 141 NTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGR 205 (262)
T ss_dssp CCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCS
T ss_pred CCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCc
Confidence 489999999987777675444333321111111 22 357788888888899999999998653
No 308
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=35.24 E-value=2e+02 Score=24.96 Aligned_cols=44 Identities=14% Similarity=0.114 Sum_probs=27.0
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..++.| --|.+.+++++++..+....+-+++-++|....+.+
T Consensus 57 ~~~~~~~D-----v~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 100 (247)
T 2jah_A 57 KVHVLELD-----VADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPV 100 (247)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCS
T ss_pred cEEEEECC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCch
Confidence 78888877 347888888887654321223356667765554444
No 309
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=34.68 E-value=2.3e+02 Score=25.08 Aligned_cols=48 Identities=15% Similarity=0.070 Sum_probs=29.5
Q ss_pred HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 191 IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 191 ~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
..|. ++..+..| --|.+.+++++++..+.-..+-+++-++|....+.+
T Consensus 74 ~~~~---~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 121 (270)
T 3ftp_A 74 QAGL---EGRGAVLN-----VNDATAVDALVESTLKEFGALNVLVNNAGITQDQLA 121 (270)
T ss_dssp HHTC---CCEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCT
T ss_pred hcCC---cEEEEEEe-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 3465 67777776 347888888887654332234467777776555544
No 310
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=34.18 E-value=1.5e+02 Score=26.40 Aligned_cols=42 Identities=12% Similarity=0.056 Sum_probs=26.6
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
++..+..| --|.+.+++++++..++...+-+++-++|....+
T Consensus 78 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~ 119 (277)
T 4fc7_A 78 RCLPLSMD-----VRAPPAVMAAVDQALKEFGRIDILINCAAGNFLC 119 (277)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred cEEEEEcC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCC
Confidence 78888887 3478888888876544322344566666654443
No 311
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=34.15 E-value=96 Score=24.14 Aligned_cols=49 Identities=14% Similarity=0.165 Sum_probs=33.1
Q ss_pred cCHHHHHHHHHHHHHCC-----CccEEEEeecCCccccccCCchHHHHHHHHhCceEE
Q 038818 212 LTPESLQAAIDLDIQAG-----LIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVH 264 (486)
Q Consensus 212 ~d~~~L~~~l~~~~~~g-----~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lh 264 (486)
.|++.+.+.|++..++. ..|+++-+..-. ...++.+|.++|+++|+.++
T Consensus 25 ~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~----~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 25 AEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLE----SPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECC----SSCCHHHHHHHHHTTTCEEE
T ss_pred CCHHHHHHHHHHHHHhChHhhCCCcEEEEccccC----ChHHHHHHHHHHHHcCCEEE
Confidence 48888888888766543 345443333221 23579999999999998773
No 312
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=34.02 E-value=2.3e+02 Score=24.66 Aligned_cols=63 Identities=13% Similarity=0.021 Sum_probs=34.1
Q ss_pred EEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 174 VVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 174 ~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
+++++........+.++..|. ++..++.| --|.+.+++++++..+.-..+-+|+-++|....+
T Consensus 34 V~~~~r~~~~~~~~~~~~~~~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~ 96 (249)
T 2ew8_A 34 IAIADLVPAPEAEAAIRNLGR---RVLTVKCD-----VSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLI 96 (249)
T ss_dssp EEEEESSCCHHHHHHHHHTTC---CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred EEEEcCCchhHHHHHHHhcCC---cEEEEEee-----cCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 444443331333333344454 78888876 3478888888776543212234566666655444
No 313
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=33.61 E-value=1.8e+02 Score=23.03 Aligned_cols=67 Identities=13% Similarity=0.160 Sum_probs=38.2
Q ss_pred CCeEEEec-----CCCchH--HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccc
Q 038818 171 SRLVVYGS-----DQTHSA--LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAI 243 (486)
Q Consensus 171 ~~~~v~~s-----~~~H~s--~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~ 243 (486)
.+.+||.. ..+.+| ..+.....|+ ....+.++. |. .+++.|.+.......|.+ ...| ...
T Consensus 35 ~~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~gv---~y~~vdI~~------d~-~~~~~L~~~~G~~tvP~V--fI~G-~~i 101 (135)
T 2wci_A 35 NPILLYMKGSPKLPSCGFSAQAVQALAACGE---RFAYVDILQ------NP-DIRAELPKYANWPTFPQL--WVDG-ELV 101 (135)
T ss_dssp CSEEEEESBCSSSBSSHHHHHHHHHHHTTCS---CCEEEEGGG------CH-HHHHHHHHHHTCCSSCEE--EETT-EEE
T ss_pred CCEEEEEEecCCCCCCccHHHHHHHHHHcCC---ceEEEECCC------CH-HHHHHHHHHHCCCCcCEE--EECC-EEE
Confidence 56777766 456666 4455566677 788888763 33 355555554443445643 2233 345
Q ss_pred cccCCch
Q 038818 244 TTVDPLG 250 (486)
Q Consensus 244 G~idpl~ 250 (486)
|..|++.
T Consensus 102 GG~d~l~ 108 (135)
T 2wci_A 102 GGCDIVI 108 (135)
T ss_dssp ESHHHHH
T ss_pred EChHHHH
Confidence 6666664
No 314
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=33.16 E-value=1.6e+02 Score=26.18 Aligned_cols=46 Identities=9% Similarity=0.033 Sum_probs=30.1
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP 248 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp 248 (486)
++..+..| --|.+++++++++..++-..+-++|-++|.+..+.+.+
T Consensus 48 ~~~~~~~D-----v~~~~~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~ 93 (247)
T 3ged_A 48 NLFYFHGD-----VADPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSS 93 (247)
T ss_dssp TEEEEECC-----TTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGT
T ss_pred CEEEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCccc
Confidence 67788877 34788888888766544223445667777666665544
No 315
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=33.14 E-value=1.7e+02 Score=25.91 Aligned_cols=62 Identities=11% Similarity=0.014 Sum_probs=34.6
Q ss_pred EEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 174 VVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 174 ~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
++++.. ......+..+.++. ++..++.| --|.+.+++++++..+....+-+++-++|....+
T Consensus 33 V~~~~r-~~~~~~~~~~~~~~---~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~ 94 (263)
T 2a4k_A 33 LVAVDR-EERLLAEAVAALEA---EAIAVVAD-----VSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSA 94 (263)
T ss_dssp EEEEES-CHHHHHHHHHTCCS---SEEEEECC-----TTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTT
T ss_pred EEEEeC-CHHHHHHHHHHhcC---ceEEEEcC-----CCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC
Confidence 444442 23334445554543 67788876 3478888888876543322234566666654444
No 316
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=32.95 E-value=14 Score=34.03 Aligned_cols=59 Identities=10% Similarity=-0.055 Sum_probs=40.3
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEe
Q 038818 203 KTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHV 265 (486)
Q Consensus 203 ~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhv 265 (486)
|.++ ++.+|.+.+++.++...++ ..-+++..+.|...+-+.+.-.++.+.+.+ .+.+++
T Consensus 9 Pf~~--dg~iD~~~l~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~-rvpvia 67 (283)
T 2pcq_A 9 PFDR--EGRLDEEAFRELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP-RKPFLV 67 (283)
T ss_dssp CBCT--TCCBCHHHHHHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC-SSCCEE
T ss_pred CCCC--CCCcCHHHHHHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh-CCcEEE
Confidence 4443 5699999999999887665 444455566666666666667777777766 665554
No 317
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=32.79 E-value=2.3e+02 Score=24.92 Aligned_cols=44 Identities=11% Similarity=0.037 Sum_probs=27.5
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..+..| --|.+.+++++++..++...+-+++-++|....+.+
T Consensus 61 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~ 104 (262)
T 3pk0_A 61 KVIGVQTD-----VSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPL 104 (262)
T ss_dssp CEEEEECC-----TTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCT
T ss_pred cEEEEEcC-----CCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCh
Confidence 78888877 347888888877654332234456667765554444
No 318
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=32.66 E-value=2.5e+02 Score=24.96 Aligned_cols=42 Identities=7% Similarity=-0.070 Sum_probs=26.3
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
++..++.| --|.+.+++++++..+.-..+-+|+-++|....+
T Consensus 72 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~ 113 (277)
T 2rhc_B 72 EADGRTCD-----VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGG 113 (277)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCS
T ss_pred ceEEEECC-----CCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 77788876 3478888888876543322344566666654443
No 319
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=32.60 E-value=2.7e+02 Score=24.84 Aligned_cols=62 Identities=11% Similarity=-0.053 Sum_probs=32.5
Q ss_pred EEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCC
Q 038818 174 VVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGT 240 (486)
Q Consensus 174 ~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gt 240 (486)
.|++....-....+.+..+.-...++..+..| --|.+.++++++...++...+-+++-++|.
T Consensus 34 ~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~iD~lvnnAg~ 95 (280)
T 3tox_A 34 KVVVTARNGNALAELTDEIAGGGGEAAALAGD-----VGDEALHEALVELAVRRFGGLDTAFNNAGA 95 (280)
T ss_dssp EEEECCSCHHHHHHHHHHHTTTTCCEEECCCC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred EEEEEECCHHHHHHHHHHHHhcCCcEEEEECC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 34444333334444444432212277888776 347788888877654332223356666664
No 320
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=32.26 E-value=2.2e+02 Score=25.23 Aligned_cols=42 Identities=7% Similarity=-0.083 Sum_probs=25.5
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
++..++.| --|.+.+++++++..+.-..+-+|+-++|....+
T Consensus 72 ~~~~~~~D-----l~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~ 113 (267)
T 1vl8_A 72 ETMAFRCD-----VSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRH 113 (267)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred eEEEEEcC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC
Confidence 77888876 3478888888776543211233566666654444
No 321
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=32.20 E-value=2.4e+02 Score=25.01 Aligned_cols=44 Identities=14% Similarity=0.062 Sum_probs=28.4
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..+..| --|.+.+++++++..+....+-+++-++|....+.+
T Consensus 78 ~~~~~~~D-----l~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~ 121 (267)
T 3u5t_A 78 KALTAQAD-----VSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTI 121 (267)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCG
T ss_pred eEEEEEcC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 78888887 347888888887654432234567777776554443
No 322
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=31.91 E-value=19 Score=35.49 Aligned_cols=30 Identities=7% Similarity=-0.036 Sum_probs=25.8
Q ss_pred CccccccCCchHHHHHHHHhCceEEeeccc
Q 038818 240 TTAITTVDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 240 tt~~G~idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
....|..++++++++-|+++|+.+++|.++
T Consensus 58 dp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 87 (448)
T 1g94_A 58 QSRGGNRAQFIDMVNRCSAAGVDIYVDTLI 87 (448)
T ss_dssp CBTTBCHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEee
Confidence 456788899999999999999999999875
No 323
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=31.87 E-value=1.7e+02 Score=26.03 Aligned_cols=44 Identities=18% Similarity=0.027 Sum_probs=28.0
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..++.| --|.+.+++++++..+....+-+++-++|....+.+
T Consensus 79 ~~~~~~~D-----~~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 122 (269)
T 4dmm_A 79 EAFAVKAD-----VSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLL 122 (269)
T ss_dssp CEEEEECC-----TTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred cEEEEECC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 78888887 347888888887654432234467777776554433
No 324
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=31.72 E-value=1.4e+02 Score=25.94 Aligned_cols=89 Identities=13% Similarity=0.050 Sum_probs=51.7
Q ss_pred HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhC----
Q 038818 185 LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYS---- 260 (486)
Q Consensus 185 ~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g---- 260 (486)
+....+..|. +|+.+..+ +.++++.+++.+.. |-+|.++.....+...+.+.++.+.+++.|
T Consensus 112 v~~~l~~~G~---~Vi~LG~~------vp~e~iv~~~~~~~-----~d~v~l~~S~l~~~~~~~~~~~i~~l~~~~~~~~ 177 (215)
T 3ezx_A 112 VTTMLGANGF---QIVDLGVD------VLNENVVEEAAKHK-----GEKVLLVGSALMTTSMLGQKDLMDRLNEEKLRDS 177 (215)
T ss_dssp HHHHHHHTSC---EEEECCSS------CCHHHHHHHHHHTT-----TSCEEEEEECSSHHHHTHHHHHHHHHHHTTCGGG
T ss_pred HHHHHHHCCC---eEEEcCCC------CCHHHHHHHHHHcC-----CCEEEEEchhcccCcHHHHHHHHHHHHHcCCCCC
Confidence 4445666788 88877553 46788876666543 334555222233346677899999988876
Q ss_pred ceEEeeccccchhccCccchhhhcCCCCCCceeecc
Q 038818 261 IWVHVDAAYAGSACICPEFRHFIDGIEGADSFSLNA 296 (486)
Q Consensus 261 ~~lhvD~a~g~~~~~~~~~~~~~~~~~~aDsi~~~~ 296 (486)
+.+.+=| ..+.+++...+ ++|.++-|+
T Consensus 178 v~v~vGG-----~~~~~~~a~~i----Gad~~~~dA 204 (215)
T 3ezx_A 178 VKCMFGG-----APVSDKWIEEI----GADATAENA 204 (215)
T ss_dssp SEEEEES-----SSCCHHHHHHH----TCCBCCSSH
T ss_pred CEEEEEC-----CCCCHHHHHHh----CCeEEECCH
Confidence 4565533 33334433322 567665443
No 325
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=31.58 E-value=2.4e+02 Score=24.58 Aligned_cols=42 Identities=14% Similarity=0.029 Sum_probs=26.6
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
++..++.| --|.+.+++++++..+....+-+|+-++|....+
T Consensus 52 ~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~ 93 (256)
T 1geg_A 52 HAVAVKVD-----VSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPST 93 (256)
T ss_dssp CEEEEECC-----TTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCB
T ss_pred cEEEEEec-----CCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 67888876 3478888888876544322344566666655444
No 326
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=31.43 E-value=33 Score=31.56 Aligned_cols=57 Identities=12% Similarity=0.163 Sum_probs=38.7
Q ss_pred CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 209 SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
++.+|.+.+++.++...++|..-+++..+.|..++-+.+.-.++.+.+.+. .+.+++
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 74 (289)
T 2yxg_A 15 NKEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIA 74 (289)
T ss_dssp TTEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 358899999998888887776555555666666666666667777766553 355544
No 327
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=31.22 E-value=17 Score=31.19 Aligned_cols=48 Identities=19% Similarity=0.320 Sum_probs=34.7
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhC--ceEEeeccccc
Q 038818 213 TPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYS--IWVHVDAAYAG 271 (486)
Q Consensus 213 d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g--~~lhvD~a~g~ 271 (486)
|++.|+++++...+ .|++. .|.+..++++.+.+|++| +.+|+|-..|.
T Consensus 18 ~~~~l~~al~s~~~------~ifll-----~g~i~~l~~~v~~lk~~~K~v~Vh~Dli~Gl 67 (192)
T 3kts_A 18 NQKDMEKILELDLT------YMVML-----ETHVAQLKALVKYAQAGGKKVLLHADLVNGL 67 (192)
T ss_dssp SSHHHHHHTTSSCC------EEEEC-----SEETTTHHHHHHHHHHTTCEEEEEGGGEETC
T ss_pred CHHHHHHHHcCCCC------EEEEe-----cCcHHHHHHHHHHHHHcCCeEEEecCchhcc
Confidence 67889988864321 23332 478899999999999998 56788866543
No 328
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=31.19 E-value=1.4e+02 Score=26.25 Aligned_cols=51 Identities=18% Similarity=0.001 Sum_probs=24.9
Q ss_pred HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccc
Q 038818 185 LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAI 243 (486)
Q Consensus 185 ~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~ 243 (486)
..+.+..++. ++..++.| --|.+.++++++...+....+-+++-++|....
T Consensus 44 ~~~~~~~~~~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~ 94 (257)
T 3tpc_A 44 GEEPAAELGA---AVRFRNAD-----VTNEADATAALAFAKQEFGHVHGLVNCAGTAPG 94 (257)
T ss_dssp --------------CEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred HHHHHHHhCC---ceEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 3444444454 67788776 347888888887654332234456666665543
No 329
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=30.98 E-value=2.7e+02 Score=24.37 Aligned_cols=44 Identities=23% Similarity=0.057 Sum_probs=26.9
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCc-ccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTT-AITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt-~~G~i 246 (486)
++..++.| --|.+.+++++++..++...+-+++-++|.. ..+.+
T Consensus 59 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~ 103 (259)
T 3edm_A 59 SALAIKAD-----LTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTI 103 (259)
T ss_dssp CCEEEECC-----TTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCT
T ss_pred ceEEEEcC-----CCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCCCCh
Confidence 67888877 3478888888876544322344566666543 33443
No 330
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=30.90 E-value=2.7e+02 Score=24.33 Aligned_cols=48 Identities=21% Similarity=0.050 Sum_probs=31.1
Q ss_pred HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 191 IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 191 ~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
..|. ++..+++| --|.+.+++++++..+....+-+|+-++|....+.+
T Consensus 70 ~~~~---~~~~~~~D-----l~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~ 117 (267)
T 3gdg_A 70 TYGI---KAKAYKCQ-----VDSYESCEKLVKDVVADFGQIDAFIANAGATADSGI 117 (267)
T ss_dssp HHCC---CEECCBCC-----TTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCCSCT
T ss_pred hcCC---ceeEEecC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCc
Confidence 3466 78888877 348888888887765443334467777776555444
No 331
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=30.72 E-value=1.5e+02 Score=25.41 Aligned_cols=45 Identities=9% Similarity=-0.081 Sum_probs=27.7
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD 247 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id 247 (486)
++..++.| --|.+.+++++++..+....+-+++-++|....+.+.
T Consensus 53 ~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~ 97 (235)
T 3l77_A 53 EVFYHHLD-----VSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLE 97 (235)
T ss_dssp CEEEEECC-----TTCHHHHHHHCC-HHHHHSSCSEEEECCCCCCCCCTT
T ss_pred eEEEEEec-----cCCHHHHHHHHHHHHHhcCCCCEEEECCccccccCcc
Confidence 78888887 3478888887765443322344677777765555443
No 332
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=30.49 E-value=2.6e+02 Score=24.45 Aligned_cols=43 Identities=19% Similarity=0.118 Sum_probs=25.9
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
++..++.| --|.+.++++++...+.-..+-+|+-++|....+.
T Consensus 58 ~~~~~~~D-----~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~ 100 (263)
T 3ai3_A 58 RVLEVAVD-----VATPEGVDAVVESVRSSFGGADILVNNAGTGSNET 100 (263)
T ss_dssp CEEEEECC-----TTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCC
T ss_pred ceEEEEcC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 78888876 34788888887754332112335666666554443
No 333
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=30.42 E-value=33 Score=31.47 Aligned_cols=51 Identities=20% Similarity=0.193 Sum_probs=38.4
Q ss_pred CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh
Q 038818 209 SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY 259 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~ 259 (486)
++.+|.+.+++.++...++|..-+++..+.|...+-+.+.-.++.+.+.+.
T Consensus 13 dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~ 63 (286)
T 2r91_A 13 GGRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSA 63 (286)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 459999999999998888876555566666666666667777787777664
No 334
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=30.38 E-value=2e+02 Score=25.71 Aligned_cols=59 Identities=14% Similarity=-0.035 Sum_probs=34.7
Q ss_pred EEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCc
Q 038818 174 VVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTT 241 (486)
Q Consensus 174 ~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt 241 (486)
+++++ ..-....+.....+. ++..+..| --|.+.+++++++..+....+-+++-++|..
T Consensus 32 V~~~~-r~~~~~~~~~~~~~~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 90 (281)
T 3zv4_A 32 VAVLD-KSAERLRELEVAHGG---NAVGVVGD-----VRSLQDQKRAAERCLAAFGKIDTLIPNAGIW 90 (281)
T ss_dssp EEEEE-SCHHHHHHHHHHTBT---TEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEECCCCCC
T ss_pred EEEEe-CCHHHHHHHHHHcCC---cEEEEEcC-----CCCHHHHHHHHHHHHHhcCCCCEEEECCCcC
Confidence 44443 333445555555665 78888887 3478888888876544322344566666543
No 335
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=30.08 E-value=1.7e+02 Score=25.70 Aligned_cols=62 Identities=15% Similarity=-0.063 Sum_probs=33.1
Q ss_pred EEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 174 VVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 174 ~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
+++++.. .....+.+..+|. ++..++.|- -|.+.+++++++..+....+-+|+-++|....+
T Consensus 32 V~~~~r~-~~~~~~~~~~~~~---~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~iD~lv~nAg~~~~~ 93 (254)
T 1hdc_A 32 VVLADVL-DEEGAATARELGD---AARYQHLDV-----TIEEDWQRVVAYAREEFGSVDGLVNNAGISTGM 93 (254)
T ss_dssp EEEEESC-HHHHHHHHHTTGG---GEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCS
T ss_pred EEEEeCC-HHHHHHHHHHhCC---ceeEEEecC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 4444432 2334444444444 677777763 377888887775443211234566666654433
No 336
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=30.07 E-value=71 Score=29.23 Aligned_cols=77 Identities=16% Similarity=0.103 Sum_probs=48.8
Q ss_pred hHHHHHHHHcCCCCCCeEEEecCCCCCcc-cCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC---CchHHHHHHHH
Q 038818 183 SALQKAAQIAGIDPKNFRAIKTTKSSSFT-LTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD---PLGPLCDIAKR 258 (486)
Q Consensus 183 ~s~~~a~~~~G~g~~~v~~v~~d~~~~~~-~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id---pl~~I~~i~~~ 258 (486)
..+.+.+..+|. .+.+.. |. +++++++.+++...+.|... ++++..|++ ++.-+ ++..|..+.+.
T Consensus 124 ~~LLr~va~~gk----PVilK~-----G~~~t~~ei~~ave~i~~~Gn~~-i~L~erg~~-y~~~~~~vdl~~i~~lk~~ 192 (285)
T 3sz8_A 124 TDLVVAIAKAGK----PVNVKK-----PQFMSPTQLKHVVSKCGEVGNDR-VMLCERGSS-FGYDNLVVDMLGFRQMAET 192 (285)
T ss_dssp HHHHHHHHHTSS----CEEEEC-----CTTSCGGGTHHHHHHHHHTTCCC-EEEEECCEE-CSSSCEECCTTHHHHHHHH
T ss_pred HHHHHHHHccCC----cEEEeC-----CCCCCHHHHHHHHHHHHHcCCCc-EEEEeCCCC-CCCCcCccCHHHHHHHHHh
Confidence 334444444444 455553 23 57778888877766666544 344444443 35444 68888888888
Q ss_pred h-CceEEeecccc
Q 038818 259 Y-SIWVHVDAAYA 270 (486)
Q Consensus 259 ~-g~~lhvD~a~g 270 (486)
+ |+.+.+|..|+
T Consensus 193 ~~~~pV~~D~sHs 205 (285)
T 3sz8_A 193 TGGCPVIFDVTHS 205 (285)
T ss_dssp TTSCCEEEETTTT
T ss_pred CCCCCEEEeCCCc
Confidence 7 79999999986
No 337
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=30.02 E-value=2.7e+02 Score=24.42 Aligned_cols=45 Identities=13% Similarity=0.039 Sum_probs=28.2
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD 247 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id 247 (486)
++..+..| --|.+.++++++...+....+-+++-++|....+.+.
T Consensus 60 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~ 104 (265)
T 3lf2_A 60 RLFASVCD-----VLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFA 104 (265)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHCSCSEEEECCCCCCCBCTT
T ss_pred eEEEEeCC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc
Confidence 58888877 3478888887776544322344577777766555443
No 338
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=29.87 E-value=3e+02 Score=24.50 Aligned_cols=44 Identities=7% Similarity=0.024 Sum_probs=28.9
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..++.| --|.+.+++++++..++...+-+++-++|....+.+
T Consensus 77 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~ 120 (281)
T 3v2h_A 77 TVLHHPAD-----MTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKI 120 (281)
T ss_dssp CEEEECCC-----TTCHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCCG
T ss_pred cEEEEeCC-----CCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCc
Confidence 78888876 347888888887655433234467777776555544
No 339
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=29.72 E-value=2.3e+02 Score=25.92 Aligned_cols=45 Identities=22% Similarity=0.087 Sum_probs=29.1
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD 247 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id 247 (486)
++..+..| --|.+.+++++++..+....+-++|-++|....+.+.
T Consensus 108 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~ 152 (317)
T 3oec_A 108 RIIARQAD-----VRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVV 152 (317)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTT
T ss_pred eEEEEECC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc
Confidence 78888887 3478888888876544322344677777766555543
No 340
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=29.71 E-value=1.7e+02 Score=27.56 Aligned_cols=60 Identities=15% Similarity=0.110 Sum_probs=42.2
Q ss_pred cCHHHHHHHHHHHHHCCCccEEEEeecCCc-ccc---ccCCchHHHHHHHHhCceEEeeccccch
Q 038818 212 LTPESLQAAIDLDIQAGLIPLFLCATVGTT-AIT---TVDPLGPLCDIAKRYSIWVHVDAAYAGS 272 (486)
Q Consensus 212 ~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt-~~G---~idpl~~I~~i~~~~g~~lhvD~a~g~~ 272 (486)
.++++++.+++.-...|...+ +++..|++ ..+ ..-++..|..+.+.+++.+.+|..|+.+
T Consensus 224 ~tl~ei~~Ave~i~~~GN~~v-iLceRG~~typ~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~G 287 (350)
T 1vr6_A 224 NTIEEFLLSAEYIANSGNTKI-ILCERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSGG 287 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCCCE-EEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHHC
T ss_pred CCHHHHHHHHHHHHHCCCCeE-EEEeCCCCCCCCcChhhhhHHHHHHHHHhhCCCEEEeCCCCCc
Confidence 489999999988777776543 33433432 212 2246778888888889999999999765
No 341
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=29.67 E-value=2e+02 Score=25.38 Aligned_cols=44 Identities=11% Similarity=0.001 Sum_probs=28.6
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..+..| --|.+.+++++++..++...+-+++-++|....+.+
T Consensus 69 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~ 112 (270)
T 3is3_A 69 DAIAIKAD-----IRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHL 112 (270)
T ss_dssp CEEEEECC-----TTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCG
T ss_pred cEEEEEcC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 78888887 347888888887654432234467777776555544
No 342
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=29.64 E-value=1.5e+02 Score=26.48 Aligned_cols=44 Identities=9% Similarity=0.077 Sum_probs=27.5
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..+..| --|.+.+++++++..++-..+-+++-++|....+.+
T Consensus 82 ~~~~~~~D-----l~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 125 (276)
T 3r1i_A 82 KALPIRCD-----VTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAM 125 (276)
T ss_dssp CCEEEECC-----TTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCG
T ss_pred eEEEEEcC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 77788877 347888888887654332234456667766554443
No 343
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=29.55 E-value=2.8e+02 Score=24.73 Aligned_cols=42 Identities=17% Similarity=0.211 Sum_probs=26.8
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
++..++.| --|.+.++++++...+....+-+|+-++|....+
T Consensus 77 ~~~~~~~D-----l~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~ 118 (302)
T 1w6u_A 77 KVHAIQCD-----VRDPDMVQNTVSELIKVAGHPNIVINNAAGNFIS 118 (302)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCS
T ss_pred ceEEEEeC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 78888876 3478889888876544333344566666644333
No 344
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=29.48 E-value=2.1e+02 Score=25.29 Aligned_cols=46 Identities=11% Similarity=0.013 Sum_probs=25.8
Q ss_pred cCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 192 AGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 192 ~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
.|. ++..+..|- -|.+.++++++...+....+-+++-++|....+.
T Consensus 68 ~~~---~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~ 113 (266)
T 4egf_A 68 FGT---DVHTVAIDL-----AEPDAPAELARRAAEAFGGLDVLVNNAGISHPQP 113 (266)
T ss_dssp HCC---CEEEEECCT-----TSTTHHHHHHHHHHHHHTSCSEEEEECCCCCCCC
T ss_pred cCC---cEEEEEecC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence 455 788888874 3556666666544332122335666666554443
No 345
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=29.46 E-value=37 Score=31.53 Aligned_cols=57 Identities=21% Similarity=0.212 Sum_probs=41.6
Q ss_pred CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 209 SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
++.+|.+.+++.++...+.|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpVia 86 (306)
T 1o5k_A 27 NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIV 86 (306)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 459999999999998888886666666666666666667777777777654 355554
No 346
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=29.45 E-value=2.9e+02 Score=24.81 Aligned_cols=42 Identities=14% Similarity=0.007 Sum_probs=26.3
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
++..++.| --|.+.++++++...+.-..+-+|+-++|....+
T Consensus 84 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~ 125 (291)
T 3cxt_A 84 NAHGYVCD-----VTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRV 125 (291)
T ss_dssp CCEEEECC-----TTCHHHHHHHHHHHHHHTCCCCEEEECCCCCCCC
T ss_pred eEEEEEec-----CCCHHHHHHHHHHHHHHcCCCcEEEECCCcCCCC
Confidence 67777776 3478888888876543322344566666654443
No 347
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=29.38 E-value=2.8e+02 Score=24.56 Aligned_cols=44 Identities=18% Similarity=0.100 Sum_probs=27.9
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..+..| --|.+.+++++++..+....+-+++-++|....+.+
T Consensus 82 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 125 (271)
T 3v2g_A 82 RAVAIRAD-----NRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPL 125 (271)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred cEEEEECC-----CCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCh
Confidence 78888887 347888888887654432234456667765544433
No 348
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=29.28 E-value=35 Score=31.48 Aligned_cols=57 Identities=19% Similarity=0.300 Sum_probs=39.1
Q ss_pred CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 209 SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
++.+|.+.+++.++...+.|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 74 (294)
T 2ehh_A 15 EGEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIA 74 (294)
T ss_dssp TTEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 458999999999988887776555555666666665666667777776653 355554
No 349
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=29.19 E-value=2.7e+02 Score=24.76 Aligned_cols=44 Identities=11% Similarity=0.004 Sum_probs=28.0
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..++.| --|.+.+++++++..+....+-+|+-++|....+.+
T Consensus 94 ~~~~~~~D-----l~d~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~ 137 (285)
T 2c07_A 94 ESSGYAGD-----VSKKEEISEVINKILTEHKNVDILVNNAGITRDNLF 137 (285)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCT
T ss_pred ceeEEECC-----CCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCch
Confidence 78888876 347888888887654432234467777765554443
No 350
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=29.14 E-value=66 Score=27.84 Aligned_cols=27 Identities=7% Similarity=0.126 Sum_probs=21.3
Q ss_pred ccCCchHHHHHHHHhCceEEee-ccccc
Q 038818 245 TVDPLGPLCDIAKRYSIWVHVD-AAYAG 271 (486)
Q Consensus 245 ~idpl~~I~~i~~~~g~~lhvD-~a~g~ 271 (486)
++.+..++.++|++||+++++. +||..
T Consensus 145 ~~~~~~~il~l~k~~g~~ivisSDAh~~ 172 (212)
T 1v77_A 145 LLRFMMKAWKLVEKYKVRRFLTSSAQEK 172 (212)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCCSSG
T ss_pred HHHHHHHHHHHHHhcCCCEEEeCCCCCh
Confidence 3678889999999999998886 35533
No 351
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.01 E-value=2e+02 Score=22.24 Aligned_cols=57 Identities=11% Similarity=0.169 Sum_probs=34.9
Q ss_pred CCeEEEecCCCchH--HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEE
Q 038818 171 SRLVVYGSDQTHSA--LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFL 234 (486)
Q Consensus 171 ~~~~v~~s~~~H~s--~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~v 234 (486)
...++|....+.+| +.......++ .+..++++.+. +-.++.+.+.+.......|.++
T Consensus 27 ~~vvvf~~~~Cp~C~~~~~~L~~~~i---~~~~vdid~~~----~~~~~~~~l~~~~g~~~vP~l~ 85 (130)
T 2cq9_A 27 NCVVIFSKTSCSYCTMAKKLFHDMNV---NYKVVELDLLE----YGNQFQDALYKMTGERTVPRIF 85 (130)
T ss_dssp SSEEEEECSSCSHHHHHHHHHHHHTC---CCEEEETTTST----THHHHHHHHHHHHSSCCSSEEE
T ss_pred CcEEEEEcCCChHHHHHHHHHHHcCC---CcEEEECcCCc----CcHHHHHHHHHHhCCCCcCEEE
Confidence 56777777777777 4455666788 88888887421 3344445555444444567643
No 352
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=28.99 E-value=23 Score=35.20 Aligned_cols=31 Identities=16% Similarity=0.007 Sum_probs=26.7
Q ss_pred CccccccCCchHHHHHHHHhCceEEeecccc
Q 038818 240 TTAITTVDPLGPLCDIAKRYSIWVHVDAAYA 270 (486)
Q Consensus 240 tt~~G~idpl~~I~~i~~~~g~~lhvD~a~g 270 (486)
.+..|..++++++++-|+++|+.+++|.+..
T Consensus 72 d~~~Gt~~df~~lv~~aH~~Gi~VilD~V~N 102 (483)
T 3bh4_A 72 RTKYGTKSELQDAIGSLHSRNVQVYGDVVLN 102 (483)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 4456888999999999999999999998753
No 353
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=28.75 E-value=2.9e+02 Score=24.16 Aligned_cols=43 Identities=9% Similarity=0.003 Sum_probs=27.3
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
++..+..| --|.+.+++++++..+....+-+++-++|....+.
T Consensus 62 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~ 104 (256)
T 3gaf_A 62 KAIGLECN-----VTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKP 104 (256)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred cEEEEECC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 78888887 34788888887765443223445677776554443
No 354
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=28.69 E-value=2.4e+02 Score=24.99 Aligned_cols=44 Identities=9% Similarity=-0.071 Sum_probs=27.5
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..+..| --|.+.+++++++..++...+-+++-++|....+.+
T Consensus 78 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~ 121 (280)
T 3pgx_A 78 KALTRVLD-----VRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRV 121 (280)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCG
T ss_pred eEEEEEcC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 78888876 347888888877654332234456667766554443
No 355
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=28.68 E-value=2.8e+02 Score=24.12 Aligned_cols=44 Identities=7% Similarity=-0.197 Sum_probs=28.7
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..++.| --|.+.+++++++..+....+-+++-++|....+.+
T Consensus 60 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 103 (250)
T 3nyw_A 60 EPIVLPLD-----ITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSL 103 (250)
T ss_dssp CCEEEECC-----TTCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC
T ss_pred cceEEecc-----CCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCC
Confidence 67788877 347888888887654432335567777776555544
No 356
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=28.64 E-value=24 Score=34.67 Aligned_cols=30 Identities=27% Similarity=0.261 Sum_probs=22.6
Q ss_pred CccccccCCchHHHHHHHHhCceEEeeccc
Q 038818 240 TTAITTVDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 240 tt~~G~idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
.+..|..++++++++-|+++|+.+++|.+.
T Consensus 80 d~~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 109 (435)
T 1mxg_A 80 ETRFGSKEELVRLIQTAHAYGIKVIADVVI 109 (435)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 344577777888888888888888888764
No 357
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=28.58 E-value=1.7e+02 Score=22.90 Aligned_cols=72 Identities=19% Similarity=0.226 Sum_probs=43.0
Q ss_pred CCeEEEecCCCchHH--HHHHHHc---CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 171 SRLVVYGSDQTHSAL--QKAAQIA---GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 171 ~~~~v~~s~~~H~s~--~~a~~~~---G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
.+.+||....+-+|. .+..... |+ ....+.+|. .-|.+++++.+.+.+.....|.+. ..| ...|.
T Consensus 14 ~~Vvvysk~~Cp~C~~ak~lL~~~~~~~v---~~~~idid~----~~d~~~~~~~l~~~~G~~tVP~If--I~G-~~IGG 83 (127)
T 3l4n_A 14 SPIIIFSKSTCSYSKGMKELLENEYQFIP---NYYIIELDK----HGHGEELQEYIKLVTGRGTVPNLL--VNG-VSRGG 83 (127)
T ss_dssp CSEEEEECTTCHHHHHHHHHHHHHEEEES---CCEEEEGGG----STTHHHHHHHHHHHHSCCSSCEEE--ETT-EECCC
T ss_pred CCEEEEEcCCCccHHHHHHHHHHhcccCC---CcEEEEecC----CCCHHHHHHHHHHHcCCCCcceEE--ECC-EEEcC
Confidence 567777777777773 3334332 55 677777764 236778888887765555567532 233 34566
Q ss_pred cCCchHH
Q 038818 246 VDPLGPL 252 (486)
Q Consensus 246 idpl~~I 252 (486)
.|++.++
T Consensus 84 ~ddl~~l 90 (127)
T 3l4n_A 84 NEEIKKL 90 (127)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665543
No 358
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=28.56 E-value=2.4e+02 Score=25.47 Aligned_cols=84 Identities=18% Similarity=0.075 Sum_probs=52.9
Q ss_pred CCCchHHHHHHHHcCCCCCCeEEEecCCCCCcc-cCHHHHHHHHHHHHHCCCccEEEEeecCC-cccc-cc--CCchHHH
Q 038818 179 DQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFT-LTPESLQAAIDLDIQAGLIPLFLCATVGT-TAIT-TV--DPLGPLC 253 (486)
Q Consensus 179 ~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~-~d~~~L~~~l~~~~~~g~~p~~vv~~~gt-t~~G-~i--dpl~~I~ 253 (486)
...+..+.+.+.-+|. .+.+.. |. .++++++.+++.-...|...+ +++--|+ +..+ .. -++..|.
T Consensus 131 ~~~n~~ll~~~a~~~k----PV~lk~-----G~~~t~~ei~~Ave~i~~~Gn~~i-~L~~Rg~~~yp~y~~~~vdl~~i~ 200 (276)
T 1vs1_A 131 NMQNFPLLREVGRSGK----PVLLKR-----GFGNTVEELLAAAEYILLEGNWQV-VLVERGIRTFEPSTRFTLDVAAVA 200 (276)
T ss_dssp GTTCHHHHHHHHHHTC----CEEEEC-----CTTCCHHHHHHHHHHHHHTTCCCE-EEEECCBCCSCCSSSSBCBHHHHH
T ss_pred cccCHHHHHHHHccCC----eEEEcC-----CCCCCHHHHHHHHHHHHHcCCCeE-EEEeCCcCCCCCcCcchhCHHHHH
Confidence 3345555555555564 455553 34 599999999998777776443 3333133 3223 22 3567777
Q ss_pred HHHHHhCceEEeeccccch
Q 038818 254 DIAKRYSIWVHVDAAYAGS 272 (486)
Q Consensus 254 ~i~~~~g~~lhvD~a~g~~ 272 (486)
.+.+.+++.+++|..|+.+
T Consensus 201 ~lk~~~~lpVi~dssH~~g 219 (276)
T 1vs1_A 201 VLKEATHLPVIVDPSHPAG 219 (276)
T ss_dssp HHHHHBSSCEEECCHHHHC
T ss_pred HHHHHhCCCEEEeCCCCCC
Confidence 7777789999999999765
No 359
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=28.49 E-value=24 Score=35.13 Aligned_cols=31 Identities=23% Similarity=0.027 Sum_probs=26.6
Q ss_pred CccccccCCchHHHHHHHHhCceEEeecccc
Q 038818 240 TTAITTVDPLGPLCDIAKRYSIWVHVDAAYA 270 (486)
Q Consensus 240 tt~~G~idpl~~I~~i~~~~g~~lhvD~a~g 270 (486)
....|..++++++++-|+++|+.+++|.+..
T Consensus 74 dp~~Gt~~df~~lv~~aH~~Gi~VilD~V~N 104 (480)
T 1ud2_A 74 RTKYGTKAQLERAIGSLKSNDINVYGDVVMN 104 (480)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 3457888999999999999999999998753
No 360
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=28.02 E-value=2.7e+02 Score=24.70 Aligned_cols=89 Identities=11% Similarity=0.123 Sum_probs=52.7
Q ss_pred EecCCCchH-HHHHHHHcCCCCCC-eEEEecCCCC-------C----cccCHHHHHHHHHHHHHCCCccEEEEeecCCcc
Q 038818 176 YGSDQTHSA-LQKAAQIAGIDPKN-FRAIKTTKSS-------S----FTLTPESLQAAIDLDIQAGLIPLFLCATVGTTA 242 (486)
Q Consensus 176 ~~s~~~H~s-~~~a~~~~G~g~~~-v~~v~~d~~~-------~----~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~ 242 (486)
+.+...|.. +.+.++..|. + ++.+|..+.+ . -.|+.+++++.|+...+.-..-..|.--.|+-.
T Consensus 34 i~P~~p~~~~~a~~A~~~G~---EvllHlPMep~~~~~~~~gp~~L~~~~s~~ei~~~l~~al~~vP~a~GvnNHmGS~~ 110 (245)
T 2nly_A 34 VMPFLEHSTKQAEIAQAAGL---EVIVHMPLEPKKGKISWLGPSGITSNLSVGEVKSRVRKAFDDIPYAVGLNNHMGSKI 110 (245)
T ss_dssp ECSSSTTHHHHHHHHHHTTC---EEEEEEEECCC--------CCCBCTTCCHHHHHHHHHHHHHHSTTCCEEEEEECTTG
T ss_pred ECCCCCCHHHHHHHHHHCCC---EEEEEcCCCCCCCCCCCCCcccCcCCCCHHHHHHHHHHHHHHCCCcEEEecccccch
Confidence 344444432 4455666665 4 4456653321 0 157889999999887654222222333346666
Q ss_pred ccccCCchHHHHHHHHhCceEEeec
Q 038818 243 ITTVDPLGPLCDIAKRYSIWVHVDA 267 (486)
Q Consensus 243 ~G~idpl~~I~~i~~~~g~~lhvD~ 267 (486)
|..-..++.+.+.++++|++++=+.
T Consensus 111 T~~~~~m~~vm~~l~~~gL~fvDS~ 135 (245)
T 2nly_A 111 VENEKIMRAILEVVKEKNAFIIDSG 135 (245)
T ss_dssp GGCHHHHHHHHHHHHHTTCEEEECC
T ss_pred hcCHHHHHHHHHHHHHCCCEEEcCC
Confidence 6666778999999999996554433
No 361
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=27.96 E-value=1.9e+02 Score=25.47 Aligned_cols=38 Identities=11% Similarity=-0.060 Sum_probs=24.0
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCC
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGT 240 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gt 240 (486)
++..+..| --|.+.++++++...+....+-+|+-++|.
T Consensus 79 ~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 79 EAESHACD-----LSHSDAIAAFATGVLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp EEEEEECC-----TTCHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred ceeEEEec-----CCCHHHHHHHHHHHHHhcCCCCEEEECCCc
Confidence 67788776 347888888877654332234456666664
No 362
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=27.90 E-value=24 Score=35.44 Aligned_cols=31 Identities=16% Similarity=0.056 Sum_probs=26.6
Q ss_pred CccccccCCchHHHHHHHHhCceEEeecccc
Q 038818 240 TTAITTVDPLGPLCDIAKRYSIWVHVDAAYA 270 (486)
Q Consensus 240 tt~~G~idpl~~I~~i~~~~g~~lhvD~a~g 270 (486)
.+..|..++++++++-|+++|+.+++|.+..
T Consensus 75 dp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~N 105 (515)
T 1hvx_A 75 RTKYGTKAQYLQAIQAAHAAGMQVYADVVFD 105 (515)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEecC
Confidence 3456888999999999999999999998753
No 363
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=27.85 E-value=54 Score=29.98 Aligned_cols=23 Identities=35% Similarity=0.439 Sum_probs=19.1
Q ss_pred ccCCchHHHHHHHHhCceEEeec
Q 038818 245 TVDPLGPLCDIAKRYSIWVHVDA 267 (486)
Q Consensus 245 ~idpl~~I~~i~~~~g~~lhvD~ 267 (486)
..+.++++.++|+++|+.+++|-
T Consensus 88 ~~~~~d~~~~~a~~~Gi~vil~~ 110 (351)
T 3vup_A 88 MLDDMKDLLDTAKKYNILVFPCL 110 (351)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCeEEEEe
Confidence 34567899999999999998774
No 364
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=27.80 E-value=25 Score=34.94 Aligned_cols=31 Identities=23% Similarity=0.068 Sum_probs=26.8
Q ss_pred CccccccCCchHHHHHHHHhCceEEeecccc
Q 038818 240 TTAITTVDPLGPLCDIAKRYSIWVHVDAAYA 270 (486)
Q Consensus 240 tt~~G~idpl~~I~~i~~~~g~~lhvD~a~g 270 (486)
....|..++++++++-|+++|+.+++|.+..
T Consensus 76 dp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~N 106 (485)
T 1wpc_A 76 RTKYGTRSQLQAAVTSLKNNGIQVYGDVVMN 106 (485)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4557888999999999999999999998753
No 365
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=27.71 E-value=2.3e+02 Score=25.13 Aligned_cols=59 Identities=19% Similarity=0.063 Sum_probs=33.9
Q ss_pred EEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCc
Q 038818 174 VVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTT 241 (486)
Q Consensus 174 ~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt 241 (486)
+++++ .......+.+..+|. ++..+..| --|.+.++++++...+.-..+-+++-++|..
T Consensus 38 V~~~~-r~~~~~~~~~~~~~~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 38 VVLAD-LPETDLAGAAASVGR---GAVHHVVD-----LTNEVSVRALIDFTIDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp EEEEE-CTTSCHHHHHHHHCT---TCEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred EEEEc-CCHHHHHHHHHHhCC---CeEEEECC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 44444 333445555555666 77788876 3478888888776543322233566666544
No 366
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=27.66 E-value=2e+02 Score=25.49 Aligned_cols=44 Identities=18% Similarity=0.055 Sum_probs=27.5
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..+..| --|.+.+++++++..+....+-+++-++|....+.+
T Consensus 74 ~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~ 117 (277)
T 3tsc_A 74 RIVAAVVD-----TRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAW 117 (277)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred eEEEEECC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 78888877 347888888887654432234456667765554433
No 367
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=27.61 E-value=34 Score=31.57 Aligned_cols=50 Identities=16% Similarity=0.210 Sum_probs=33.4
Q ss_pred CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHH
Q 038818 209 SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKR 258 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~ 258 (486)
++.+|.+.+++.++...+.|..-+++..+.|...+-+.+.-.++.+.+.+
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~ 64 (297)
T 2rfg_A 15 NGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAE 64 (297)
T ss_dssp TTEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHH
Confidence 45888888888888777777555555555555555555666666666654
No 368
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=27.55 E-value=37 Score=31.25 Aligned_cols=56 Identities=13% Similarity=0.148 Sum_probs=40.7
Q ss_pred CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh---CceEEe
Q 038818 209 SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY---SIWVHV 265 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~---g~~lhv 265 (486)
+ .+|.+.+++.++...+.|..-+++..+.|...+-+.+.-.++.+.+.+. .+.+++
T Consensus 18 d-~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 76 (292)
T 3daq_A 18 N-KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIA 76 (292)
T ss_dssp T-EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred C-CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 5 8999999999988888876666666666766666667777777777654 355555
No 369
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=27.47 E-value=24 Score=34.63 Aligned_cols=29 Identities=10% Similarity=0.059 Sum_probs=18.1
Q ss_pred ccccccCCchHHHHHHHHhCceEEeeccc
Q 038818 241 TAITTVDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 241 t~~G~idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
...|..++++++++-|+++|+.+++|.+.
T Consensus 64 p~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 92 (441)
T 1lwj_A 64 AEYGSEREFKEMIEAFHDSGIKVVLDLPI 92 (441)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 33455666666666666666666666553
No 370
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=27.32 E-value=25 Score=34.61 Aligned_cols=29 Identities=24% Similarity=0.313 Sum_probs=20.1
Q ss_pred ccccccCCchHHHHHHHHhCceEEeeccc
Q 038818 241 TAITTVDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 241 t~~G~idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
+..|..++++++++-|+++|+.+++|.+.
T Consensus 78 ~~~Gt~~~~~~lv~~~h~~Gi~vi~D~V~ 106 (449)
T 3dhu_A 78 PEYGTLADFKALTDRAHELGMKVMLDIVY 106 (449)
T ss_dssp GGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 34566677777777777777777777653
No 371
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=27.18 E-value=3.1e+02 Score=23.84 Aligned_cols=60 Identities=20% Similarity=0.217 Sum_probs=35.2
Q ss_pred eEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCC
Q 038818 173 LVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGT 240 (486)
Q Consensus 173 ~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gt 240 (486)
..|+..........+....+|. ++..+..| --|.+.+++++++..+....+-+++-++|.
T Consensus 29 ~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lvnnAg~ 88 (254)
T 3kzv_A 29 TVVYGVARSEAPLKKLKEKYGD---RFFYVVGD-----ITEDSVLKQLVNAAVKGHGKIDSLVANAGV 88 (254)
T ss_dssp CEEEEEESCHHHHHHHHHHHGG---GEEEEESC-----TTSHHHHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred eEEEEecCCHHHHHHHHHHhCC---ceEEEECC-----CCCHHHHHHHHHHHHHhcCCccEEEECCcc
Confidence 3444333333445555555565 78888887 347888888887654432234456666665
No 372
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=27.08 E-value=2.8e+02 Score=24.37 Aligned_cols=39 Identities=5% Similarity=-0.125 Sum_probs=23.9
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTT 241 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt 241 (486)
++..++.| --|.+.+++++++..+....+-+|+-++|..
T Consensus 65 ~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 103 (267)
T 1iy8_A 65 EVLTTVAD-----VSDEAQVEAYVTATTERFGRIDGFFNNAGIE 103 (267)
T ss_dssp CEEEEECC-----TTSHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred eEEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 78888876 3478888888876543211233566666644
No 373
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=27.01 E-value=2.3e+02 Score=24.62 Aligned_cols=38 Identities=16% Similarity=0.053 Sum_probs=23.8
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCC
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGT 240 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gt 240 (486)
++..++.| --|.+.+++++++..+....+-+|+-++|.
T Consensus 59 ~~~~~~~D-----~~~~~~~~~~~~~~~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 59 TAISVAVD-----VSDPESAKAMADRTLAEFGGIDYLVNNAAI 96 (253)
T ss_dssp EEEEEECC-----TTSHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred cEEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 67788876 347888888877654332234456666654
No 374
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=26.89 E-value=2.8e+02 Score=24.42 Aligned_cols=44 Identities=18% Similarity=0.038 Sum_probs=27.8
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..+..|- -|.+.++++++...+....+-+|+.++|....+.+
T Consensus 76 ~~~~~~~Dl-----~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~ 119 (269)
T 3gk3_A 76 DFKAYAVDV-----ADFESCERCAEKVLADFGKVDVLINNAGITRDATF 119 (269)
T ss_dssp CCEEEECCT-----TCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCBCT
T ss_pred ceEEEEecC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcch
Confidence 788888773 47888888777654332234467777776655544
No 375
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=26.83 E-value=3e+02 Score=23.88 Aligned_cols=61 Identities=15% Similarity=-0.018 Sum_probs=34.0
Q ss_pred EEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccc
Q 038818 174 VVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAI 243 (486)
Q Consensus 174 ~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~ 243 (486)
++++... .....+..+.++. ++..++.| --|.+.++++++...+....+-+|+-++|....
T Consensus 39 V~~~~r~-~~~~~~~~~~~~~---~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~ 99 (265)
T 2o23_A 39 AVLLDLP-NSGGEAQAKKLGN---NCVFAPAD-----VTSEKDVQTALALAKGKFGRVDVAVNCAGIAVA 99 (265)
T ss_dssp EEEEECT-TSSHHHHHHHHCT---TEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred EEEEeCC-cHhHHHHHHHhCC---ceEEEEcC-----CCCHHHHHHHHHHHHHHCCCCCEEEECCccCCC
Confidence 4444432 2334445555565 78888877 347888888877544322223456666665443
No 376
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=26.70 E-value=3.5e+02 Score=24.50 Aligned_cols=58 Identities=9% Similarity=0.036 Sum_probs=31.7
Q ss_pred ccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc-cCCchHHHHHHHHhCceEEeeccc
Q 038818 211 TLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT-VDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 211 ~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~-idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
.++.+.+.+.++.....-...-+|++ .|..+.+. .+-+.++.+.++++|+.+.+|-..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~v~~-~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 172 (320)
T 3ie7_A 114 TVSQTNKDNLLKQIAKKVKKEDMVVI-AGSPPPHYTLSDFKELLRTVKATGAFLGCDNSG 172 (320)
T ss_dssp CCCHHHHHHHHHHHHHHCCTTCEEEE-ESCCCTTCCHHHHHHHHHHHHHHTCEEEEECCH
T ss_pred CCCHHHHHHHHHHHHHHhcCCCEEEE-eCCCCCCCCHHHHHHHHHHHHhcCCEEEEECCh
Confidence 45677776655432111111123333 33333221 133678888889999999999753
No 377
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=26.38 E-value=2.8e+02 Score=23.96 Aligned_cols=48 Identities=17% Similarity=0.102 Sum_probs=30.1
Q ss_pred HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 191 IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 191 ~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
..|. ++..++.| --|.+.+++++++..++...+-+++-++|....+.+
T Consensus 51 ~~~~---~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 98 (246)
T 3osu_A 51 AKGV---DSFAIQAN-----VADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLL 98 (246)
T ss_dssp HTTS---CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCT
T ss_pred hcCC---cEEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 3455 78888877 347888888887654432234467777776555544
No 378
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=26.36 E-value=1.8e+02 Score=26.68 Aligned_cols=44 Identities=14% Similarity=0.132 Sum_probs=29.3
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..+..| --|.+.++++++...+....+-+|+-++|....+.+
T Consensus 60 ~~~~~~~D-----l~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 103 (319)
T 3ioy_A 60 EVMGVQLD-----VASREGFKMAADEVEARFGPVSILCNNAGVNLFQPI 103 (319)
T ss_dssp GEEEEECC-----TTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCG
T ss_pred eEEEEECC-----CCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCc
Confidence 57777776 347888888888765543345567777776554443
No 379
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=26.01 E-value=3.2e+02 Score=23.91 Aligned_cols=39 Identities=15% Similarity=0.095 Sum_probs=24.0
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTT 241 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt 241 (486)
++..++.| --|.+.++++++...+.-..+-+|+-++|..
T Consensus 57 ~~~~~~~D-----~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~ 95 (262)
T 1zem_A 57 EARSYVCD-----VTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQ 95 (262)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred cEEEEEec-----CCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 67888876 3478888888776543211233566666644
No 380
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=26.00 E-value=26 Score=35.31 Aligned_cols=28 Identities=11% Similarity=-0.042 Sum_probs=15.4
Q ss_pred ccccccCCchHHHHHHHHhCceEEeecc
Q 038818 241 TAITTVDPLGPLCDIAKRYSIWVHVDAA 268 (486)
Q Consensus 241 t~~G~idpl~~I~~i~~~~g~~lhvD~a 268 (486)
...|..++++++++-||++|+.+++|.+
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 114 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVV 114 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3345555555555555555555555543
No 381
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=25.89 E-value=1.6e+02 Score=22.00 Aligned_cols=81 Identities=10% Similarity=0.120 Sum_probs=43.2
Q ss_pred CCeEEEecCCCchHH--HHHHHHcCCCCCC---eEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 171 SRLVVYGSDQTHSAL--QKAAQIAGIDPKN---FRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 171 ~~~~v~~s~~~H~s~--~~a~~~~G~g~~~---v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
...++|......++- .......|+ . +..++++.+. +.+...+.+.+.......|.+++ .|. ..|.
T Consensus 19 ~~vv~f~~~~Cp~C~~~~~~L~~~~~---~~~~~~~vdi~~~~----~~~~~~~~l~~~~g~~~vP~v~i--~g~-~igg 88 (114)
T 2hze_A 19 NKVTIFVKYTCPFCRNALDILNKFSF---KRGAYEIVDIKEFK----PENELRDYFEQITGGKTVPRIFF--GKT-SIGG 88 (114)
T ss_dssp TCEEEEECTTCHHHHHHHHHHTTSCB---CTTSEEEEEGGGSS----SHHHHHHHHHHHHSCCSSCEEEE--TTE-EEES
T ss_pred CCEEEEEeCCChhHHHHHHHHHHcCC---CcCceEEEEccCCC----ChHHHHHHHHHHhCCCCcCEEEE--CCE-EEeC
Confidence 456677766667763 333444456 5 8888887421 33455555555444445675433 333 3444
Q ss_pred cCCc------hHHHHHHHHhCc
Q 038818 246 VDPL------GPLCDIAKRYSI 261 (486)
Q Consensus 246 idpl------~~I~~i~~~~g~ 261 (486)
.+++ .+|.++.++.|+
T Consensus 89 ~~~~~~~~~~~~L~~~L~~~g~ 110 (114)
T 2hze_A 89 YSDLLEIDNMDALGDILSSIGV 110 (114)
T ss_dssp HHHHHHHHHTTCHHHHHHHTTC
T ss_pred cHHHHHHHHCChHHHHHHHcCC
Confidence 4443 245556665554
No 382
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar}
Probab=25.68 E-value=3.7e+02 Score=24.17 Aligned_cols=63 Identities=11% Similarity=0.084 Sum_probs=39.3
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchh
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSA 273 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~ 273 (486)
.++.|-+. ..+++.|+++++.. +..|.++-+. .++ .++-.++.+.|+++|+-++.=+..+++.
T Consensus 155 kir~iGvS-----n~~~~~l~~~~~~~---~~~p~~~Q~~--~~~---~~~~~~l~~~~~~~gi~v~a~spL~~G~ 217 (283)
T 3o0k_A 155 RVKSIGVS-----NFRTADLERLIKES---GVTPVLNQIE--LHP---QFQQDELRLFHGKHDIATEAWSPLGQGK 217 (283)
T ss_dssp SEEEEEEE-----SCCHHHHHHHHHHH---SCCCSEEEEE--CBT---TBCCHHHHHHHHHTTCEEEEESTTCCC-
T ss_pred CcceEEec-----cCcHHHHHHHHHhC---CCCeEEEEee--cCc---ccCcHHHHHHHHHCCcEEEEecCCCCCc
Confidence 58888775 34788898887653 2234322121 222 2234689999999999998776665543
No 383
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=25.65 E-value=2.9e+02 Score=24.54 Aligned_cols=42 Identities=14% Similarity=0.064 Sum_probs=26.2
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
++..++.| --|.+.+++++++..+....+-+++-++|....+
T Consensus 77 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~ 118 (286)
T 3uve_A 77 RIVTAEVD-----VRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGG 118 (286)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred ceEEEEcC-----CCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCC
Confidence 78888877 3478888888776544322344566666654433
No 384
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=25.63 E-value=27 Score=34.65 Aligned_cols=30 Identities=20% Similarity=0.263 Sum_probs=22.7
Q ss_pred CccccccCCchHHHHHHHHhCceEEeeccc
Q 038818 240 TTAITTVDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 240 tt~~G~idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
....|..++++++++-|+++|+.+++|.+.
T Consensus 91 dp~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 120 (478)
T 2guy_A 91 NENYGTADDLKALSSALHERGMYLMVDVVA 120 (478)
T ss_dssp CTTSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CccCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 345677777888888888888888888764
No 385
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=25.63 E-value=26 Score=33.90 Aligned_cols=29 Identities=10% Similarity=0.037 Sum_probs=22.3
Q ss_pred ccccccCCchHHHHHHHHhCceEEeeccc
Q 038818 241 TAITTVDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 241 t~~G~idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
...|..++++++++-|+++|+.+++|.+.
T Consensus 63 ~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~ 91 (405)
T 1ht6_A 63 SKYGNAAELKSLIGALHGKGVQAIADIVI 91 (405)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 44577778888888888888888888765
No 386
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=25.58 E-value=3.4e+02 Score=23.81 Aligned_cols=42 Identities=7% Similarity=-0.059 Sum_probs=26.5
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
++..+..| -.|.+.+++++++..+....+-+|+-++|....+
T Consensus 81 ~~~~~~~D-----l~~~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~ 122 (272)
T 1yb1_A 81 KVHTFVVD-----CSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTS 122 (272)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCC
T ss_pred eEEEEEee-----CCCHHHHHHHHHHHHHHCCCCcEEEECCCcCCCc
Confidence 77888876 3478888888876543322344566666655444
No 387
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=25.48 E-value=2.9e+02 Score=24.17 Aligned_cols=44 Identities=23% Similarity=0.192 Sum_probs=25.5
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
.+..+..| --|.+.+++++++..++-..+-+|+-++|....+.+
T Consensus 54 ~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~ 97 (260)
T 1nff_A 54 AARYVHLD-----VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTI 97 (260)
T ss_dssp GEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCT
T ss_pred CceEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 46667776 347888888877544321123456666665544433
No 388
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=25.38 E-value=3.3e+02 Score=23.48 Aligned_cols=42 Identities=12% Similarity=0.084 Sum_probs=25.8
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
++..++.| --|.+.+++++++..+....+-+++-++|....+
T Consensus 55 ~~~~~~~D-----~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~ 96 (246)
T 2uvd_A 55 DAIAVRAD-----VANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDN 96 (246)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCB
T ss_pred cEEEEEcC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 77788876 3478888888876543222234566666655444
No 389
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=25.33 E-value=2.8e+02 Score=24.56 Aligned_cols=45 Identities=9% Similarity=-0.040 Sum_probs=28.3
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD 247 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id 247 (486)
++..++.| --|.+.+++++++..+....+-+++-++|....+.+.
T Consensus 72 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~ 116 (281)
T 3s55_A 72 RCISAKVD-----VKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLP 116 (281)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTT
T ss_pred eEEEEeCC-----CCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcc
Confidence 78888887 3478888888876543322344566777765555443
No 390
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=25.32 E-value=2.3e+02 Score=25.86 Aligned_cols=44 Identities=9% Similarity=-0.093 Sum_probs=27.6
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..+..| --|.+.+++++++..+....+-+++-++|....+.+
T Consensus 87 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~ 130 (322)
T 3qlj_A 87 EAVADGSN-----VADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMI 130 (322)
T ss_dssp EEEEECCC-----TTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCG
T ss_pred cEEEEECC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 67777776 347888888887654432234467777776555443
No 391
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=25.21 E-value=2.6e+02 Score=22.26 Aligned_cols=57 Identities=11% Similarity=0.169 Sum_probs=34.7
Q ss_pred CCeEEEecCCCchH--HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEE
Q 038818 171 SRLVVYGSDQTHSA--LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFL 234 (486)
Q Consensus 171 ~~~~v~~s~~~H~s--~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~v 234 (486)
...++|....+.+| +.......|+ .+..++++.+. +-..+.+.+.+.......|.++
T Consensus 49 ~~Vvvf~~~~Cp~C~~~k~~L~~~~i---~~~~vdId~~~----~~~~~~~~L~~~~g~~tvP~if 107 (146)
T 2ht9_A 49 NCVVIFSKTSCSYCTMAKKLFHDMNV---NYKVVELDLLE----YGNQFQDALYKMTGERTVPRIF 107 (146)
T ss_dssp CSEEEEECTTCHHHHHHHHHHHHHTC---CCEEEEGGGCT----THHHHHHHHHHHHSCCCSCEEE
T ss_pred CCEEEEECCCChhHHHHHHHHHHcCC---CeEEEECccCc----CCHHHHHHHHHHhCCCCcCeEE
Confidence 56777777777776 4455666788 78888887421 3344555555444444567643
No 392
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=25.06 E-value=2e+02 Score=20.99 Aligned_cols=69 Identities=13% Similarity=0.157 Sum_probs=39.0
Q ss_pred CCeEEEecCCCchH--HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHH-HCCCccEEEEeecCCccccccC
Q 038818 171 SRLVVYGSDQTHSA--LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDI-QAGLIPLFLCATVGTTAITTVD 247 (486)
Q Consensus 171 ~~~~v~~s~~~H~s--~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~-~~g~~p~~vv~~~gtt~~G~id 247 (486)
.+.+||....+.+| ..+.....|+ ....+.++. +.+ +++.+.+.. .....|.++ ..| ...|..+
T Consensus 16 ~~v~vy~~~~Cp~C~~ak~~L~~~~i---~y~~idI~~------~~~-~~~~l~~~~~g~~~vP~if--i~g-~~igG~d 82 (99)
T 3qmx_A 16 AKIEIYTWSTCPFCMRALALLKRKGV---EFQEYCIDG------DNE-AREAMAARANGKRSLPQIF--IDD-QHIGGCD 82 (99)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHHTC---CCEEEECTT------CHH-HHHHHHHHTTTCCCSCEEE--ETT-EEEESHH
T ss_pred CCEEEEEcCCChhHHHHHHHHHHCCC---CCEEEEcCC------CHH-HHHHHHHHhCCCCCCCEEE--ECC-EEEeChH
Confidence 56677777777777 4456677788 888888864 333 344444433 344567542 223 3345455
Q ss_pred CchHH
Q 038818 248 PLGPL 252 (486)
Q Consensus 248 pl~~I 252 (486)
++.++
T Consensus 83 ~l~~~ 87 (99)
T 3qmx_A 83 DIYAL 87 (99)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44433
No 393
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=24.69 E-value=3e+02 Score=24.00 Aligned_cols=42 Identities=24% Similarity=0.200 Sum_probs=24.4
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
++..++.| --|.+.+++++++..+....+-+|+-++|....+
T Consensus 59 ~~~~~~~D-----~~d~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~ 100 (263)
T 3ak4_A 59 GGFAVEVD-----VTKRASVDAAMQKAIDALGGFDLLCANAGVSTMR 100 (263)
T ss_dssp CCEEEECC-----TTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCC
T ss_pred CCeEEEEe-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC
Confidence 56667766 3478888888775443222234566666654433
No 394
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=24.69 E-value=3.7e+02 Score=24.56 Aligned_cols=48 Identities=17% Similarity=0.124 Sum_probs=30.9
Q ss_pred HcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 191 IAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 191 ~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
..|. ++..++.| --|.+.+++++++..++...+-+|+-++|....|.+
T Consensus 56 ~~~~---~~~~~~~D-----vtd~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~ 103 (324)
T 3u9l_A 56 DNDV---DLRTLELD-----VQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPA 103 (324)
T ss_dssp HHTC---CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCSEEEECCCCCBCSCG
T ss_pred hcCC---cEEEEEee-----cCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCh
Confidence 3455 78888887 347888888887654432234467777776655544
No 395
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=24.68 E-value=2.8e+02 Score=24.92 Aligned_cols=42 Identities=14% Similarity=0.001 Sum_probs=26.8
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
++..+++| --|.+.+++++++..+....+-+++.++|....+
T Consensus 90 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~ 131 (299)
T 3t7c_A 90 RIIASQVD-----VRDFDAMQAAVDDGVTQLGRLDIVLANAALASEG 131 (299)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred ceEEEECC-----CCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 78888887 3478888888876544322344566666655444
No 396
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=24.64 E-value=2.9e+02 Score=24.24 Aligned_cols=61 Identities=10% Similarity=-0.063 Sum_probs=32.8
Q ss_pred eEEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCC---ccEEEEeecCCc
Q 038818 173 LVVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGL---IPLFLCATVGTT 241 (486)
Q Consensus 173 ~~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~---~p~~vv~~~gtt 241 (486)
.++++.........+....++. ++..++.| --|.+.+++++++..+.-. .+-+++-++|..
T Consensus 35 ~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~ 98 (269)
T 2h7i_A 35 QLVLTGFDRLRLIQRITDRLPA---KAPLLELD-----VQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFM 98 (269)
T ss_dssp EEEEEECSCHHHHHHHHTTSSS---CCCEEECC-----TTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCC
T ss_pred EEEEEecChHHHHHHHHHhcCC---CceEEEcc-----CCCHHHHHHHHHHHHHHhCCCCCceEEEECCccC
Confidence 3444443332223444444443 56677776 3478888888876543211 344566666644
No 397
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=24.55 E-value=35 Score=31.39 Aligned_cols=51 Identities=16% Similarity=0.289 Sum_probs=35.8
Q ss_pred CcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHh
Q 038818 209 SFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRY 259 (486)
Q Consensus 209 ~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~ 259 (486)
++.+|.+.+++.++...+.|..-+++..+.|...+-+.+.-.++.+.+.+.
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~ 65 (292)
T 2vc6_A 15 DDRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKT 65 (292)
T ss_dssp TTEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 468999999999988888776555555555555555566666777766653
No 398
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=24.51 E-value=79 Score=30.28 Aligned_cols=60 Identities=23% Similarity=0.175 Sum_probs=39.7
Q ss_pred cCHHHHHHHHHHHHHCCCccEEEEeecCCc-cccccCCchHHHHHHHHhCceEEeeccccc
Q 038818 212 LTPESLQAAIDLDIQAGLIPLFLCATVGTT-AITTVDPLGPLCDIAKRYSIWVHVDAAYAG 271 (486)
Q Consensus 212 ~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt-~~G~idpl~~I~~i~~~~g~~lhvD~a~g~ 271 (486)
-+.+..++-|+...+.|..-++-++-.+.. ..-....+++|.++|+++|+.+++|-.-..
T Consensus 38 ~~~~~~~~Yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DVsp~~ 98 (385)
T 1x7f_A 38 STKEKDMAYISAAARHGFSRIFTCLLSVNRPKEEIVAEFKEIINHAKDNNMEVILDVAPAV 98 (385)
T ss_dssp SCHHHHHHHHHHHHTTTEEEEEEEECCC--------HHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHH
Confidence 366777788888877887655544433322 223456789999999999999999976533
No 399
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=24.34 E-value=2.7e+02 Score=24.79 Aligned_cols=51 Identities=10% Similarity=0.001 Sum_probs=31.7
Q ss_pred HHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC
Q 038818 189 AQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD 247 (486)
Q Consensus 189 ~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id 247 (486)
....|. ++..+..| --|.+.+++++++..+....+-+++-++|....+.+.
T Consensus 60 ~~~~~~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~ 110 (285)
T 3sc4_A 60 IEEAGG---QALPIVGD-----IRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIE 110 (285)
T ss_dssp HHHHTS---EEEEEECC-----TTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTT
T ss_pred HHhcCC---cEEEEECC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc
Confidence 344465 78888877 3478888888876544322344677777766555443
No 400
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=24.21 E-value=3.7e+02 Score=23.75 Aligned_cols=47 Identities=11% Similarity=-0.107 Sum_probs=28.8
Q ss_pred HHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcc
Q 038818 188 AAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTA 242 (486)
Q Consensus 188 a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~ 242 (486)
.....|. ++..+++| --|.+++++++++..++-...-++|-++|.+.
T Consensus 49 ~~~~~~~---~~~~~~~D-----v~~~~~v~~~v~~~~~~~G~iDiLVNnAGi~~ 95 (258)
T 4gkb_A 49 ALAQRQP---RATYLPVE-----LQDDAQCRDAVAQTIATFGRLDGLVNNAGVND 95 (258)
T ss_dssp HHHHHCT---TCEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHhcCC---CEEEEEee-----cCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 3344455 78888887 34788888888765543223335666666543
No 401
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=24.08 E-value=3e+02 Score=23.91 Aligned_cols=42 Identities=14% Similarity=0.004 Sum_probs=25.4
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
++..++.| --|.+.+++++++..+.-..+-+|+-++|....+
T Consensus 54 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~ 95 (258)
T 3a28_C 54 KAVFVGLD-----VTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIK 95 (258)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCC
T ss_pred cEEEEEcc-----CCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 78888877 3478888887775443212233566666654443
No 402
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=23.87 E-value=1.9e+02 Score=20.30 Aligned_cols=74 Identities=14% Similarity=0.181 Sum_probs=41.9
Q ss_pred CCeEEEecCCCchH--HHHHHHHcCCCCCCeEEEecCCCCCcccCHHH---HHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 171 SRLVVYGSDQTHSA--LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPES---LQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 171 ~~~~v~~s~~~H~s--~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~---L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
.+.++|....+.++ +.......|+ ....++++. .+.+. +...+.+.......|.+++ .+....|
T Consensus 12 ~~v~ly~~~~Cp~C~~~~~~L~~~gi---~~~~~~v~~-----~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~~i~G- 80 (92)
T 3ic4_A 12 AEVLMYGLSTCPHCKRTLEFLKREGV---DFEVIWIDK-----LEGEERKKVIEKVHSISGSYSVPVVVK--GDKHVLG- 80 (92)
T ss_dssp SSSEEEECTTCHHHHHHHHHHHHHTC---CCEEEEGGG-----CCHHHHHHHHHHHHHHHSSSCSCEEEE--TTEEEES-
T ss_pred ceEEEEECCCChHHHHHHHHHHHcCC---CcEEEEeee-----CCccchHHHHHHHHHhcCCCCcCEEEE--CCEEEeC-
Confidence 56788877777777 4456667788 788888763 23322 2233333333456786554 3443333
Q ss_pred cCCchHHHHHH
Q 038818 246 VDPLGPLCDIA 256 (486)
Q Consensus 246 idpl~~I~~i~ 256 (486)
. +-++|.++.
T Consensus 81 ~-~~~~l~~~l 90 (92)
T 3ic4_A 81 Y-NEEKLKELI 90 (92)
T ss_dssp C-CHHHHHHHH
T ss_pred C-CHHHHHHHh
Confidence 3 446665543
No 403
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=23.86 E-value=31 Score=34.38 Aligned_cols=27 Identities=22% Similarity=0.271 Sum_probs=15.8
Q ss_pred cccccCCchHHHHHHHHhCceEEeecc
Q 038818 242 AITTVDPLGPLCDIAKRYSIWVHVDAA 268 (486)
Q Consensus 242 ~~G~idpl~~I~~i~~~~g~~lhvD~a 268 (486)
..|..++++++++-|+++|+.+++|.+
T Consensus 77 ~~Gt~~d~~~Lv~~aH~~Gi~VilD~V 103 (488)
T 1wza_A 77 DYGTLEDFHKLVEAAHQRGIKVIIDLP 103 (488)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 345555566666666666666666654
No 404
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=23.86 E-value=1.7e+02 Score=19.80 Aligned_cols=32 Identities=9% Similarity=0.261 Sum_probs=21.3
Q ss_pred CeEEEecCCCchH--HHHHHHHcCCCCCCeEEEecCC
Q 038818 172 RLVVYGSDQTHSA--LQKAAQIAGIDPKNFRAIKTTK 206 (486)
Q Consensus 172 ~~~v~~s~~~H~s--~~~a~~~~G~g~~~v~~v~~d~ 206 (486)
+.++|....+.++ +.......|+ .+..++++.
T Consensus 2 ~i~~y~~~~C~~C~~~~~~l~~~~i---~~~~~~i~~ 35 (82)
T 1fov_A 2 NVEIYTKETCPYCHRAKALLSSKGV---SFQELPIDG 35 (82)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHTC---CCEEEECTT
T ss_pred cEEEEECCCChhHHHHHHHHHHCCC---CcEEEECCC
Confidence 3566766666666 3455666788 888888874
No 405
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=23.81 E-value=82 Score=28.99 Aligned_cols=65 Identities=17% Similarity=0.118 Sum_probs=43.7
Q ss_pred CeEEEecCCCCCcc-cCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC---CchHHHHHHHHhCceEEeecccc
Q 038818 198 NFRAIKTTKSSSFT-LTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD---PLGPLCDIAKRYSIWVHVDAAYA 270 (486)
Q Consensus 198 ~v~~v~~d~~~~~~-~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id---pl~~I~~i~~~~g~~lhvD~a~g 270 (486)
..+.+.. |. +++++++.+++...+.|... ++++..|++ ++.-+ ++..|..+.+ +++.+.+|..|+
T Consensus 156 kPVilK~-----Gms~t~~ei~~ave~i~~~Gn~~-iiL~erg~~-y~~~~~~vdl~~i~~lk~-~~~PV~~D~sHs 224 (298)
T 3fs2_A 156 RVVNVKK-----GQFLAPWDMKNVLAKITESGNPN-VLATERGVS-FGYNTLVSDMRALPIMAG-LGAPVIFDATHS 224 (298)
T ss_dssp SEEEEEC-----CTTCCGGGHHHHHHHHHTTTCCC-EEEEECCEE-CSSSCEECCTTHHHHHHT-TTSCEEEEHHHH
T ss_pred CcEEEeC-----CCCCCHHHHHHHHHHHHHcCCCe-EEEEECCCC-CCCCCCccCHHHHHHHHH-cCCcEEEcCCCc
Confidence 3555653 23 58888888888776666544 344444443 35444 6888888877 999999999886
No 406
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=23.75 E-value=3.1e+02 Score=24.35 Aligned_cols=43 Identities=7% Similarity=-0.066 Sum_probs=24.7
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..+..|- -|.+.++++++...+.| .+-+++.++|....+.+
T Consensus 83 ~~~~~~~Dv-----~~~~~~~~~~~~~~~~g-~iD~lvnnAg~~~~~~~ 125 (275)
T 4imr_A 83 TAQELAGDL-----SEAGAGTDLIERAEAIA-PVDILVINASAQINATL 125 (275)
T ss_dssp CEEEEECCT-----TSTTHHHHHHHHHHHHS-CCCEEEECCCCCCCBCG
T ss_pred eEEEEEecC-----CCHHHHHHHHHHHHHhC-CCCEEEECCCCCCCCCc
Confidence 788888773 35566666665544333 23456666665544443
No 407
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=23.69 E-value=3.7e+02 Score=23.58 Aligned_cols=44 Identities=14% Similarity=-0.075 Sum_probs=24.8
Q ss_pred CeEEEecCCCCCcccCH----HHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTP----ESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~----~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..+..|- -|. +.++++++...+....+-+|+-++|....+.+
T Consensus 63 ~~~~~~~Dl-----~~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 110 (276)
T 1mxh_A 63 SAVLCKGDL-----SLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPL 110 (276)
T ss_dssp CEEEEECCC-----SSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCS
T ss_pred ceEEEeccC-----CCccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCc
Confidence 777887763 245 77777776543321223456667665544433
No 408
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=23.59 E-value=29 Score=34.98 Aligned_cols=30 Identities=20% Similarity=0.160 Sum_probs=20.8
Q ss_pred CccccccCCchHHHHHHHHhCceEEeeccc
Q 038818 240 TTAITTVDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 240 tt~~G~idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
....|..++++++++-|+++|+.+++|.++
T Consensus 73 dp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 102 (549)
T 4aie_A 73 DPQYGTMADMDELISKAKEHHIKIVMDLVV 102 (549)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 334566677777777777777777777654
No 409
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=23.54 E-value=3.8e+02 Score=23.57 Aligned_cols=44 Identities=9% Similarity=-0.050 Sum_probs=27.2
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCC-CccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAG-LIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g-~~p~~vv~~~gtt~~G~i 246 (486)
++..+..| --|.+.++++++...+.- ..+-+++-++|....+.+
T Consensus 71 ~~~~~~~D-----~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 115 (273)
T 1ae1_A 71 NVEGSVCD-----LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEA 115 (273)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCT
T ss_pred ceEEEECC-----CCCHHHHHHHHHHHHHHcCCCCcEEEECCCCCCCCCh
Confidence 77788876 347888888887654432 234456666665544433
No 410
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=23.51 E-value=66 Score=28.61 Aligned_cols=37 Identities=32% Similarity=0.335 Sum_probs=28.1
Q ss_pred ccEEEEeecCCccccccCCchHHHHHHHHhCceEEeecc
Q 038818 230 IPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAA 268 (486)
Q Consensus 230 ~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a 268 (486)
...+|++|-|.+..|. +|+ +.+++++++|+.+|+=|.
T Consensus 10 ~k~iillTDG~~~~g~-~p~-~aa~~a~~~gi~v~tIGi 46 (242)
T 3rag_A 10 IRQILVITDGCSNIGP-DPV-EAARRAHRHGIVVNVIGI 46 (242)
T ss_dssp EEEEEEEESSCCCSSS-CHH-HHHHHHHHTTCEEEEEEE
T ss_pred ccEEEEEccCCCCCCC-CHH-HHHHHHHHCCCEEEEEEe
Confidence 3457888889888886 777 456789999999887544
No 411
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=23.43 E-value=3.4e+02 Score=23.81 Aligned_cols=49 Identities=16% Similarity=0.105 Sum_probs=30.3
Q ss_pred HHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 190 QIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 190 ~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
+..|. ++..++.| --|.+.+++++++..+....+-+|+-++|....+.+
T Consensus 75 ~~~~~---~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~ 123 (271)
T 4iin_A 75 EEKGY---KAAVIKFD-----AASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLA 123 (271)
T ss_dssp HHTTC---CEEEEECC-----TTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCG
T ss_pred HhcCC---ceEEEECC-----CCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCccc
Confidence 33455 78888887 347888888877654432234467777776554443
No 412
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=23.43 E-value=2.5e+02 Score=23.79 Aligned_cols=68 Identities=15% Similarity=0.113 Sum_probs=43.4
Q ss_pred HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhC----
Q 038818 185 LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYS---- 260 (486)
Q Consensus 185 ~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g---- 260 (486)
+....+..|. +++.+.. ...++++.+++.+.. |-+|.+++-. +.....+.++.+.+++.+
T Consensus 108 va~~l~~~G~---~v~~LG~------~vp~~~l~~~~~~~~-----~d~v~lS~~~--~~~~~~~~~~i~~l~~~~~~~~ 171 (210)
T 1y80_A 108 VAMMLESGGF---TVYNLGV------DIEPGKFVEAVKKYQ-----PDIVGMSALL--TTTMMNMKSTIDALIAAGLRDR 171 (210)
T ss_dssp HHHHHHHTTC---EEEECCS------SBCHHHHHHHHHHHC-----CSEEEEECCS--GGGTHHHHHHHHHHHHTTCGGG
T ss_pred HHHHHHHCCC---EEEECCC------CCCHHHHHHHHHHcC-----CCEEEEeccc--cccHHHHHHHHHHHHhcCCCCC
Confidence 3444556688 7777654 457888888876652 3345555432 235677888888888865
Q ss_pred ceEEeecc
Q 038818 261 IWVHVDAA 268 (486)
Q Consensus 261 ~~lhvD~a 268 (486)
+.+.+=|+
T Consensus 172 ~~v~vGG~ 179 (210)
T 1y80_A 172 VKVIVGGA 179 (210)
T ss_dssp CEEEEEST
T ss_pred CeEEEECC
Confidence 67777543
No 413
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=23.30 E-value=26 Score=34.75 Aligned_cols=30 Identities=13% Similarity=0.110 Sum_probs=25.5
Q ss_pred CccccccCCchHHHHHHHHhCceEEeeccc
Q 038818 240 TTAITTVDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 240 tt~~G~idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
.+..|..++++++++-|+++|+.+++|.++
T Consensus 68 dp~~Gt~~d~~~lv~~~h~~Gi~VilD~V~ 97 (471)
T 1jae_A 68 NTRSGDESAFTDMTRRCNDAGVRIYVDAVI 97 (471)
T ss_dssp EETTEEHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 345788899999999999999999999765
No 414
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=23.06 E-value=30 Score=34.28 Aligned_cols=29 Identities=10% Similarity=0.047 Sum_probs=15.6
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 213 TPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 213 d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
+.+++++++++..++|. -|++-...|-++
T Consensus 95 t~~df~~lv~~~h~~Gi---~VilD~V~NH~~ 123 (475)
T 2z1k_A 95 GNEALRHLLEVAHAHGV---RVILDGVFNHTG 123 (475)
T ss_dssp CHHHHHHHHHHHHHTTC---EEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCC---EEEEEEeccccc
Confidence 35677777776666653 234444434344
No 415
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=23.05 E-value=33 Score=33.51 Aligned_cols=30 Identities=23% Similarity=0.229 Sum_probs=19.0
Q ss_pred CccccccCCchHHHHHHHHhCceEEeeccc
Q 038818 240 TTAITTVDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 240 tt~~G~idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
....|..++++++++-|+++|+.+++|.++
T Consensus 75 dp~~Gt~~d~~~lv~~ah~~Gi~vilD~V~ 104 (424)
T 2dh2_A 75 DPNFGSKEDFDSLLQSAKKKSIRVILDLTP 104 (424)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CccCCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 334566666666666666666666666654
No 416
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=22.99 E-value=3.7e+02 Score=23.20 Aligned_cols=40 Identities=18% Similarity=0.095 Sum_probs=24.4
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTA 242 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~ 242 (486)
++..++.| --|.+.+++++++..+....+-+|+-+++...
T Consensus 63 ~~~~~~~D-----~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~ 102 (260)
T 3awd_A 63 DVSSVVMD-----VTNTESVQNAVRSVHEQEGRVDILVACAGICI 102 (260)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred ceEEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 78888876 34788888887754332222345666666443
No 417
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=22.88 E-value=2.3e+02 Score=24.89 Aligned_cols=44 Identities=11% Similarity=0.014 Sum_probs=28.5
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..++.| --|.+.+++++++..++...+-+++-++|....+.+
T Consensus 64 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 107 (262)
T 3ksu_A 64 KVALYQSD-----LSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPI 107 (262)
T ss_dssp EEEEEECC-----CCSHHHHHHHHHHHHHHHCSEEEEEECCCCCCSSCG
T ss_pred cEEEEECC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 78888887 347888888887654432234467777775554443
No 418
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=22.72 E-value=1.2e+02 Score=23.70 Aligned_cols=47 Identities=13% Similarity=0.015 Sum_probs=31.9
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccc
Q 038818 213 TPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 213 d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
..+.+...+++..+.|.+ .|+++.|. .+ +++.++|+++|+.++ ..+.
T Consensus 67 p~~~v~~~v~e~~~~g~k--~v~~~~G~-----~~--~e~~~~a~~~Girvv-~nC~ 113 (122)
T 3ff4_A 67 NPQNQLSEYNYILSLKPK--RVIFNPGT-----EN--EELEEILSENGIEPV-IGCT 113 (122)
T ss_dssp CHHHHGGGHHHHHHHCCS--EEEECTTC-----CC--HHHHHHHHHTTCEEE-ESCH
T ss_pred CHHHHHHHHHHHHhcCCC--EEEECCCC-----Ch--HHHHHHHHHcCCeEE-CCcC
Confidence 456666667766666643 36666553 22 699999999999987 3444
No 419
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=22.68 E-value=3.6e+02 Score=23.59 Aligned_cols=44 Identities=11% Similarity=0.042 Sum_probs=27.6
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
++..+..| --|.+.+++++++..+....+-.|+-++|....+.+
T Consensus 77 ~~~~~~~D-----l~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~ 120 (267)
T 4iiu_A 77 NGRLLSFD-----VANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAF 120 (267)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCG
T ss_pred ceEEEEec-----CCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCcc
Confidence 78888876 347888888887654332234456667765554443
No 420
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=22.63 E-value=3.9e+02 Score=23.35 Aligned_cols=38 Identities=8% Similarity=-0.093 Sum_probs=24.5
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCC
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGT 240 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gt 240 (486)
++..++.| --|.+.+++++++..+....+-+++-++|.
T Consensus 61 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 98 (264)
T 3ucx_A 61 RALSVGTD-----ITDDAQVAHLVDETMKAYGRVDVVINNAFR 98 (264)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHTSCCSEEEECCCS
T ss_pred cEEEEEcC-----CCCHHHHHHHHHHHHHHcCCCcEEEECCCC
Confidence 78888887 347888888887655432234456666554
No 421
>2pw9_A Putative formate dehydrogenase accessory protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Desulfotalea psychrophila LSV54} SCOP: c.97.1.5
Probab=22.20 E-value=1.8e+02 Score=26.27 Aligned_cols=65 Identities=17% Similarity=0.164 Sum_probs=44.5
Q ss_pred CchHHHHHHHHc---CCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHH
Q 038818 181 THSALQKAAQIA---GIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAK 257 (486)
Q Consensus 181 ~H~s~~~a~~~~---G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~ 257 (486)
=|.+++|.+..+ |+...+-. += .+|+..|-+.|+..-. +|+++..+++|+.. .++|+
T Consensus 175 RHNAlDKliG~~l~~g~~~~~~~-~~-----SgR~S~EmV~Kaa~aG-----IpvlvS~SApTslA---------V~lA~ 234 (268)
T 2pw9_A 175 RHNAVDKVLGSILLGRASNNSAV-YT-----TGRLTSDMVLKCARIG-----IPIIMSRTSPSSLG---------LALAK 234 (268)
T ss_dssp HHHHHHHHHHHHHTTSSCSSSEE-EE-----SSCBCHHHHHHHHHHT-----CCEEEESSCBCHHH---------HHHHH
T ss_pred hhHHHHHHHHHHHHcCCCcCCcE-EE-----ecCchHHHHHHHHHcC-----CCEEEEcccccHHH---------HHHHH
Confidence 488999976544 55433333 32 4599999999887653 47666666665543 89999
Q ss_pred HhCceEEe
Q 038818 258 RYSIWVHV 265 (486)
Q Consensus 258 ~~g~~lhv 265 (486)
++|+-|+-
T Consensus 235 ~~giTLiG 242 (268)
T 2pw9_A 235 RSGATLVA 242 (268)
T ss_dssp HHTCEEEE
T ss_pred HcCCEEEE
Confidence 99998853
No 422
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=22.19 E-value=30 Score=34.44 Aligned_cols=30 Identities=23% Similarity=0.324 Sum_probs=21.6
Q ss_pred CccccccCCchHHHHHHHHhCceEEeeccc
Q 038818 240 TTAITTVDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 240 tt~~G~idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
....|..++++++++-|+++|+.+++|.++
T Consensus 91 d~~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 120 (484)
T 2aaa_A 91 NSNFGTADNLKSLSDALHARGMYLMVDVVP 120 (484)
T ss_dssp CTTTCCHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 345666777777777777778877777654
No 423
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=22.16 E-value=3.8e+02 Score=24.85 Aligned_cols=50 Identities=12% Similarity=0.023 Sum_probs=31.1
Q ss_pred HHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 189 AQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 189 ~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
....|. ++..+.+| --|.+.+++++++..++...+-+||-++|....+.+
T Consensus 96 ~~~~g~---~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~ 145 (346)
T 3kvo_A 96 IEAVGG---KALPCIVD-----VRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNT 145 (346)
T ss_dssp HHHTTC---EEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCT
T ss_pred HHhcCC---eEEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 344455 78888877 347888888887665432234467777765554444
No 424
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=22.08 E-value=32 Score=35.22 Aligned_cols=28 Identities=25% Similarity=0.321 Sum_probs=15.5
Q ss_pred cccccCCchHHHHHHHHhCceEEeeccc
Q 038818 242 AITTVDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 242 ~~G~idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
..|..++++++++-|+++|+.+++|.++
T Consensus 218 ~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 245 (588)
T 1j0h_A 218 HFGDKETLKTLIDRCHEKGIRVMLDAVF 245 (588)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 3445555555555555556655555543
No 425
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=21.94 E-value=4.1e+02 Score=23.38 Aligned_cols=42 Identities=5% Similarity=-0.048 Sum_probs=27.4
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAIT 244 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G 244 (486)
++..+++| --|.+.+++++++..+....+-+|+-++|....+
T Consensus 72 ~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~ 113 (287)
T 3pxx_A 72 KAYTAEVD-----VRDRAAVSRELANAVAEFGKLDVVVANAGICPLG 113 (287)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred ceEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCccc
Confidence 78888887 3478888888876544322344677777765544
No 426
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=21.71 E-value=2.1e+02 Score=26.32 Aligned_cols=69 Identities=14% Similarity=0.060 Sum_probs=42.1
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchh
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSA 273 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~ 273 (486)
.++.|-+. ..+.+.|+++++.....|..+..+ .....++. ..++-.++.+.|+++|+-++.=...+++.
T Consensus 132 kir~iGvS-----n~~~~~l~~~~~~~~~~g~~~~~~-~Q~~~~~~-~~~~e~~l~~~~~~~gi~v~a~spL~~G~ 200 (327)
T 1gve_A 132 KFVELGLS-----NYVSWEVAEICTLCKKNGWIMPTV-YQGMYNAI-TRQVETELFPCLRHFGLRFYAFNPLAGGL 200 (327)
T ss_dssp SEEEEEEE-----SCCHHHHHHHHHHHHHHTCCCEEE-EEEECBTT-BCGGGTTHHHHHHHHTCEEEEECTTGGGG
T ss_pred ceeEEEec-----CCCHHHHHHHHHHHHHcCCCCeEE-EeccCcce-ecccHHHHHHHHHHcCCeEEEeccccccc
Confidence 58888775 456788888877655455433322 22222221 11223589999999999998766655543
No 427
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=21.62 E-value=2.4e+02 Score=20.88 Aligned_cols=71 Identities=11% Similarity=0.121 Sum_probs=41.3
Q ss_pred CCeEEEecCCCchH--HHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCC
Q 038818 171 SRLVVYGSDQTHSA--LQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDP 248 (486)
Q Consensus 171 ~~~~v~~s~~~H~s--~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idp 248 (486)
.+.++|....+.+| ..+.....|+ ....+.++.. .-+-+++++.+.+.......|.+. ..| ...|..|+
T Consensus 19 ~~v~vy~~~~Cp~C~~~~~~L~~~~i---~~~~~di~~~---~~~~~~~~~~l~~~~g~~tvP~if--i~g-~~igG~~~ 89 (113)
T 3rhb_A 19 NTVVIYSKTWCSYCTEVKTLFKRLGV---QPLVVELDQL---GPQGPQLQKVLERLTGQHTVPNVF--VCG-KHIGGCTD 89 (113)
T ss_dssp SSEEEEECTTCHHHHHHHHHHHHTTC---CCEEEEGGGS---TTHHHHHHHHHHHHHSCCSSCEEE--ETT-EEEESHHH
T ss_pred CCEEEEECCCChhHHHHHHHHHHcCC---CCeEEEeecC---CCChHHHHHHHHHHhCCCCcCEEE--ECC-EEEcCcHH
Confidence 56777777777777 4455666788 7778877631 113456666676654445567542 223 33455555
Q ss_pred ch
Q 038818 249 LG 250 (486)
Q Consensus 249 l~ 250 (486)
+.
T Consensus 90 ~~ 91 (113)
T 3rhb_A 90 TV 91 (113)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 428
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=21.57 E-value=1.1e+02 Score=29.27 Aligned_cols=57 Identities=18% Similarity=0.064 Sum_probs=39.3
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeecCCcc-ccccCCchHHHHHHHHhCceEEeeccc
Q 038818 213 TPESLQAAIDLDIQAGLIPLFLCATVGTTA-ITTVDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 213 d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~-~G~idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
..++.++-|+...+.|..-++-.+-.+... .-....+++|.++|+++|+.+++|-..
T Consensus 15 ~~~~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DIsp 72 (372)
T 2p0o_A 15 ITNDTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIAKAEKMKIMVDISG 72 (372)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHHHHHTCEEEEEECH
T ss_pred CHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCH
Confidence 455566778777788877665555444322 223467899999999999999999754
No 429
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=21.44 E-value=3.9e+02 Score=22.92 Aligned_cols=54 Identities=22% Similarity=0.212 Sum_probs=30.6
Q ss_pred HHHHHHHHcCCCCCCe-EEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc
Q 038818 184 ALQKAAQIAGIDPKNF-RAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV 246 (486)
Q Consensus 184 s~~~a~~~~G~g~~~v-~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i 246 (486)
...+....++. ++ ..+..| --|.+.++++++...+.+ .+-+|+-++|....+.+
T Consensus 47 ~~~~~~~~~~~---~~~~~~~~D-----~~~~~~~~~~~~~~~~~~-~id~li~~Ag~~~~~~~ 101 (254)
T 2wsb_A 47 ALDRAAQELGA---AVAARIVAD-----VTDAEAMTAAAAEAEAVA-PVSILVNSAGIARLHDA 101 (254)
T ss_dssp HHHHHHHHHGG---GEEEEEECC-----TTCHHHHHHHHHHHHHHS-CCCEEEECCCCCCCBCS
T ss_pred HHHHHHHHhcc---cceeEEEEe-----cCCHHHHHHHHHHHHhhC-CCcEEEECCccCCCCCc
Confidence 34444444454 56 667766 347888888877644312 23456666665544433
No 430
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=21.13 E-value=34 Score=34.07 Aligned_cols=29 Identities=10% Similarity=0.036 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 214 PESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 214 ~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
.+++++++++..++|. -|++-...|-+|.
T Consensus 102 ~~df~~Lv~~aH~~Gi---~VilD~V~NH~s~ 130 (488)
T 2wc7_A 102 NEAFKELLDAAHQRNI---KVVLDGVFNHSSR 130 (488)
T ss_dssp HHHHHHHHHHHHHTTC---EEEEEECCSBCCS
T ss_pred HHHHHHHHHHHHHCCC---EEEEEeCCCcCCC
Confidence 4666666666666552 3445555555543
No 431
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=21.09 E-value=1.1e+02 Score=21.52 Aligned_cols=47 Identities=4% Similarity=0.052 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhcCc-EEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 038818 427 LNRKLLESINASGQ-LYVSHGMVAGIYFIRFAVGATLTEDRHVIAAWKVVQEK 478 (486)
Q Consensus 427 ~~~~l~~~l~~~g~-~~~~~~~~~~~~~lR~~~~~~~tt~~did~~i~~l~~~ 478 (486)
..+++.++|...|. ..+. .+..+.|+.+ .|..++++.+++.+.|++.
T Consensus 22 ~A~~l~~~L~~~G~~a~i~----~~~~~yRV~v-Gpf~s~~~A~~~~~~L~~~ 69 (81)
T 1uta_A 22 QAETVRAQLAFEGFDSKIT----TNNGWNRVVI-GPVKGKENADSTLNRLKMA 69 (81)
T ss_dssp HHHHHHHHHHHHTCCEEEE----ECSSSEEEEE-SSCBTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCeEEE----eCCcEEEEEE-CCcCCHHHHHHHHHHHHHc
Confidence 34567777777775 2222 3455778877 5788888999999988873
No 432
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=20.98 E-value=3.3e+02 Score=24.05 Aligned_cols=38 Identities=13% Similarity=-0.072 Sum_probs=23.7
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCC
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGT 240 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gt 240 (486)
++..++.| --|.+.+++++++..+....+-+++-++|.
T Consensus 64 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 101 (281)
T 3svt_A 64 AIRYEPTD-----ITNEDETARAVDAVTAWHGRLHGVVHCAGG 101 (281)
T ss_dssp EEEEEECC-----TTSHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred eEEEEeCC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 56777776 347888888887654432233456666664
No 433
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=20.95 E-value=2.8e+02 Score=24.17 Aligned_cols=37 Identities=14% Similarity=0.147 Sum_probs=24.2
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecC
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVG 239 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~g 239 (486)
++..+..| --|.+.+++++++..+....+-+|+-++|
T Consensus 58 ~~~~~~~D-----l~~~~~v~~~~~~~~~~~g~id~lv~~Ag 94 (264)
T 3i4f_A 58 RLQFVQAD-----VTKKEDLHKIVEEAMSHFGKIDFLINNAG 94 (264)
T ss_dssp GEEEEECC-----TTSHHHHHHHHHHHHHHHSCCCEEECCCC
T ss_pred ceEEEEec-----CCCHHHHHHHHHHHHHHhCCCCEEEECCc
Confidence 67888877 34788888888765443223445666666
No 434
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=20.93 E-value=35 Score=34.79 Aligned_cols=30 Identities=13% Similarity=0.060 Sum_probs=17.5
Q ss_pred CHHHHHHHHHHHHHCCCccEEEEeecCCccccc
Q 038818 213 TPESLQAAIDLDIQAGLIPLFLCATVGTTAITT 245 (486)
Q Consensus 213 d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~ 245 (486)
+++++++++++..++|. -|++-...|-++.
T Consensus 91 t~~df~~lv~~aH~~Gi---~VilD~V~NH~s~ 120 (570)
T 1m53_A 91 TMEDFDSLVAEMKKRNM---RLMIDVVINHTSD 120 (570)
T ss_dssp CHHHHHHHHHHHHHTTC---EEEEEECCSBCCT
T ss_pred CHHHHHHHHHHHHHCCC---EEEEEEecccccc
Confidence 46777777777766663 3444444444443
No 435
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=20.87 E-value=27 Score=34.09 Aligned_cols=14 Identities=43% Similarity=0.624 Sum_probs=7.9
Q ss_pred CCCceeeccccccC
Q 038818 288 GADSFSLNAHKWFF 301 (486)
Q Consensus 288 ~aDsi~~~~hK~l~ 301 (486)
++|-+=+|.-|.+.
T Consensus 166 gvDGfR~D~~~~~~ 179 (422)
T 1ua7_A 166 GADGFRFDAAKHIE 179 (422)
T ss_dssp TCCEEEETTGGGSC
T ss_pred CCCEEEEEhhhhcC
Confidence 45666666555543
No 436
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1
Probab=20.84 E-value=3e+02 Score=27.67 Aligned_cols=133 Identities=16% Similarity=0.054 Sum_probs=64.8
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCccCCCcceEEcCCchHHHHHHHHHHHHHHHHHcc-ccCC---CCeEEEecCCCc----
Q 038818 111 ATELENIVMDWLGEMLKLPKSFLFSGTGGGVIQGTTCEAILCTLAAARDQILNEIG-RENI---SRLVVYGSDQTH---- 182 (486)
Q Consensus 111 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~-~~~~---~~~~v~~s~~~H---- 182 (486)
..+++..+.+-+.+.+..+.. -|++.|||-.+-+.+..+++.......+ .... ++...+.-....
T Consensus 208 ~~~lr~~L~~aV~~rl~sdvp-------vgv~LSGGlDSS~iaala~~~~~~~~~~~~~~~a~~~~l~tfsig~~~~~E~ 280 (553)
T 1ct9_A 208 KNELRQALEDSVKSHLMSDVP-------YGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPGSPDL 280 (553)
T ss_dssp HHHHHHHHHHHHHHHTCCSSC-------EEEECCSSHHHHHHHHHHHHHC----------------CEEEEEESTTCHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCc-------eEEeCCCCccHHHHHHHHHHhhccccccccccccccCceeEEEecCCCCcHH
Confidence 345666666677776654443 6899999998877665554431100000 0000 112222211111
Q ss_pred hHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCce
Q 038818 183 SALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIW 262 (486)
Q Consensus 183 ~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~ 262 (486)
....+.|+.+|. ..+.+.++ .+++.+.+.+....-..|. .+..-..-++-.+.+.+++.|+.
T Consensus 281 ~~A~~vA~~lg~---~h~~i~~~--------~~~~~~~l~~~i~~~~~~~-------~~~~~~~~~~~~l~~~a~~~g~~ 342 (553)
T 1ct9_A 281 KAAQEVANHLGT---VHHEIHFT--------VQEGLDAIRDVIYHIETYD-------VTTIRASTPMYLMSRKIKAMGIK 342 (553)
T ss_dssp HHHHHHHHHHTC---EEEEEECC--------HHHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCC---CCEEEECC--------HHHHHHHHHHHHHHhcCCC-------cccchHHHHHHHHHHHHHHcCCe
Confidence 124567788898 77777654 3333333333221000000 00000112345667778889999
Q ss_pred EEeecc
Q 038818 263 VHVDAA 268 (486)
Q Consensus 263 lhvD~a 268 (486)
++.+|-
T Consensus 343 vvLsG~ 348 (553)
T 1ct9_A 343 MVLSGE 348 (553)
T ss_dssp EEECCT
T ss_pred EEEECC
Confidence 988874
No 437
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=20.83 E-value=4.3e+02 Score=23.22 Aligned_cols=60 Identities=17% Similarity=0.056 Sum_probs=34.6
Q ss_pred EEEecCCCchHHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEee-cCCccc
Q 038818 174 VVYGSDQTHSALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCAT-VGTTAI 243 (486)
Q Consensus 174 ~v~~s~~~H~s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~-~gtt~~ 243 (486)
++++. ..-....+.+..++. ++..+..| --|.+.++++++.. ++-..+-+++.+ ++....
T Consensus 57 Vi~~~-r~~~~~~~~~~~~~~---~~~~~~~D-----l~~~~~v~~~~~~~-~~~~~id~lv~~aag~~~~ 117 (281)
T 3ppi_A 57 VVIAD-LAAEKGKALADELGN---RAEFVSTN-----VTSEDSVLAAIEAA-NQLGRLRYAVVAHGGFGVA 117 (281)
T ss_dssp EEEEE-SCHHHHHHHHHHHCT---TEEEEECC-----TTCHHHHHHHHHHH-TTSSEEEEEEECCCCCCCC
T ss_pred EEEEe-CChHHHHHHHHHhCC---ceEEEEcC-----CCCHHHHHHHHHHH-HHhCCCCeEEEccCccccc
Confidence 44443 333445566666666 78888887 44888999888765 332233344444 443333
No 438
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=20.66 E-value=1.8e+02 Score=26.21 Aligned_cols=65 Identities=17% Similarity=0.064 Sum_probs=40.1
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCcccccc---CCchHHHHHHHHhCceEEeecccc
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTV---DPLGPLCDIAKRYSIWVHVDAAYA 270 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~i---dpl~~I~~i~~~~g~~lhvD~a~g 270 (486)
..+.+...- ..+++++..+++.-...|..-+ +++-.|++. +.- -++..|..+.+. + .+++|+.|+
T Consensus 119 ~PV~lK~G~----~~t~~e~~~Av~~i~~~GN~~i-~L~~rG~~~-~y~~~~~dl~~i~~lk~~-~-pVivD~sH~ 186 (267)
T 2nwr_A 119 RAVNVKKGQ----FLAPWDTKNVVEKLKFGGAKEI-YLTERGTTF-GYNNLVVDFRSLPIMKQW-A-KVIYDATHS 186 (267)
T ss_dssp SEEEEECCT----TCCGGGGHHHHHHHHHTTCSSE-EEEECCEEC-SSSCEECCTTHHHHHTTT-S-EEEEETTGG
T ss_pred CcEEEeCCC----CCCHHHHHHHHHHHHHcCCCeE-EEEECCCCC-CCCccccCHHHHHHHHHc-C-CEEEcCCcc
Confidence 456665421 1466677777776666665443 444444433 433 377777776554 7 999999997
No 439
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=20.56 E-value=3.6e+02 Score=23.67 Aligned_cols=99 Identities=12% Similarity=-0.029 Sum_probs=51.4
Q ss_pred ceEEcCCchHHHHHHHHHHHHHHHHHccccCCCCeEEE---ecC---------CCchHHHHHHHHcCCCCCCeEEEecCC
Q 038818 139 GGVIQGTTCEAILCTLAAARDQILNEIGRENISRLVVY---GSD---------QTHSALQKAAQIAGIDPKNFRAIKTTK 206 (486)
Q Consensus 139 ~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~---~s~---------~~H~s~~~a~~~~G~g~~~v~~v~~d~ 206 (486)
.++..|||..+.+.+..+ +.. | -+.+.+ .+. ..+..+.+.|+.+|+ .+..+++..
T Consensus 7 vvvl~SGGkDSs~al~~l-~~~-----G----~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGI---pl~~v~~~g 73 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWA-IKN-----R----FSVKFLVTMVSENEESYMYHTINANLTDLQARALGI---PLVKGFTQG 73 (237)
T ss_dssp EEEECCSSHHHHHHHHHH-HHT-----T----CEEEEEEEEECC--------CCSSSHHHHHHHHHTC---CEEEEEC--
T ss_pred EEEEecCcHHHHHHHHHH-HHc-----C----CeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCC---CEEEEECCC
Confidence 468889999998655443 321 1 111111 111 123456778899999 888887753
Q ss_pred CCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccC--C-chHHHHHHHHhCceEE
Q 038818 207 SSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVD--P-LGPLCDIAKRYSIWVH 264 (486)
Q Consensus 207 ~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~id--p-l~~I~~i~~~~g~~lh 264 (486)
. ..--.++|.+++++. |. - .| .+|.++ . -..+-.+|.+.|+...
T Consensus 74 ~--~~~e~e~l~~~l~~~---~i-~-~v-------v~Gdi~s~yqr~r~e~vc~~~gl~~~ 120 (237)
T 3rjz_A 74 E--KEKEVEDLKRVLSGL---KI-Q-GI-------VAGALASKYQRKRIEKVAKELGLEVY 120 (237)
T ss_dssp ------CHHHHHHHHTTS---CC-S-EE-------ECC---CCSHHHHHHHHHHHTTCEEE
T ss_pred C--chHHHHHHHHHHHhc---CC-c-EE-------EECCcchHHHHHHHHHHHHHcCCEEE
Confidence 1 122356677666532 11 1 11 246653 2 3456678888777654
No 440
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto reductase family 7, SSA reductase, barrel; HET: FLC NDP; 2.4A {Homo sapiens}
Probab=20.42 E-value=2.3e+02 Score=26.61 Aligned_cols=69 Identities=14% Similarity=0.067 Sum_probs=41.9
Q ss_pred CeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccccccCCchHHHHHHHHhCceEEeeccccchh
Q 038818 198 NFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAITTVDPLGPLCDIAKRYSIWVHVDAAYAGSA 273 (486)
Q Consensus 198 ~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~G~idpl~~I~~i~~~~g~~lhvD~a~g~~~ 273 (486)
.++.|-+. ..+.+.|+++++.....|..+..++ ....+. ...++-.++.+.|+++|+-++.=...+++.
T Consensus 165 kir~iGvS-----n~~~~~l~~~~~~~~~~g~~~~~~~-Q~~yn~-~~~~~e~~l~~~~~~~gi~v~a~spL~~G~ 233 (360)
T 2bp1_A 165 KFVELGLS-----NYASWEVAEICTLCKSNGWILPTVY-QGMYNA-TTRQVETELFPCLRHFGLRFYAYNPLAGGL 233 (360)
T ss_dssp SEEEEEEE-----SCCHHHHHHHHHHHHHHTCCCEEEE-EEECBT-TBCGGGTTHHHHHHHHTCEEEEECTTGGGG
T ss_pred CccEEEEe-----CCCHHHHHHHHHHHHHcCCCCceEE-eeccch-hhccchhhHHHHHHHcCCeEEEecccccCc
Confidence 58888775 4567888888776554554333222 222222 112233589999999999988765555543
No 441
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=20.32 E-value=4.6e+02 Score=23.29 Aligned_cols=76 Identities=12% Similarity=0.075 Sum_probs=51.8
Q ss_pred HHHHHHHHcCCCCCCeEEEecCCCCCcccCHHHHHHHHHHHHHCCCccEEEEeecCCccc--cccCCchHHHHHHHH---
Q 038818 184 ALQKAAQIAGIDPKNFRAIKTTKSSSFTLTPESLQAAIDLDIQAGLIPLFLCATVGTTAI--TTVDPLGPLCDIAKR--- 258 (486)
Q Consensus 184 s~~~a~~~~G~g~~~v~~v~~d~~~~~~~d~~~L~~~l~~~~~~g~~p~~vv~~~gtt~~--G~idpl~~I~~i~~~--- 258 (486)
...+.|+-+|+ ..+.|.. +...|+.+...++|+...+.|.. |....|.-.. ....+..++.+.+++
T Consensus 89 ~yl~~~k~lGf---~~iEiS~---G~i~l~~~~~~~~I~~~~~~G~~---v~~EvG~k~~~~~~~~~~~~~I~~~~~~Le 159 (251)
T 1qwg_A 89 EFLNECEKLGF---EAVEISD---GSSDISLEERNNAIKRAKDNGFM---VLTEVGKKMPDKDKQLTIDDRIKLINFDLD 159 (251)
T ss_dssp HHHHHHHHHTC---CEEEECC---SSSCCCHHHHHHHHHHHHHTTCE---EEEEECCSSHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCC---CEEEECC---CcccCCHHHHHHHHHHHHHCCCE---EeeeccccCCcccCCCCHHHHHHHHHHHHH
Confidence 45677888999 8888853 45688999999999998888853 3444454333 445566667666664
Q ss_pred hCceEEeecc
Q 038818 259 YSIWVHVDAA 268 (486)
Q Consensus 259 ~g~~lhvD~a 268 (486)
.|+|.++=.+
T Consensus 160 AGA~~ViiEa 169 (251)
T 1qwg_A 160 AGADYVIIEG 169 (251)
T ss_dssp HTCSEEEECC
T ss_pred CCCcEEEEee
Confidence 5876654444
No 442
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=20.10 E-value=36 Score=34.78 Aligned_cols=29 Identities=28% Similarity=0.401 Sum_probs=18.5
Q ss_pred ccccccCCchHHHHHHHHhCceEEeeccc
Q 038818 241 TAITTVDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 241 t~~G~idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
...|..++++++++-|+++|+.+++|.++
T Consensus 213 p~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 241 (583)
T 1ea9_C 213 PQFGDKDTLKKLVDLCHERGIRVLLDAVF 241 (583)
T ss_dssp TTTCCHHHHHHHHHHHTTTTCEEEEECCC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 33455566666666677777777777654
No 443
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=20.07 E-value=34 Score=35.00 Aligned_cols=26 Identities=27% Similarity=0.308 Sum_probs=13.5
Q ss_pred ccccCCchHHHHHHHHhCceEEeecc
Q 038818 243 ITTVDPLGPLCDIAKRYSIWVHVDAA 268 (486)
Q Consensus 243 ~G~idpl~~I~~i~~~~g~~lhvD~a 268 (486)
.|..++++++++-|+++|+.+++|.+
T Consensus 216 ~Gt~~dfk~lv~~~H~~Gi~VilD~V 241 (585)
T 1wzl_A 216 FGDLPTFRRLVDEAHRRGIKIILDAV 241 (585)
T ss_dssp TCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 34444555555555555555555544
No 444
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=20.04 E-value=44 Score=34.35 Aligned_cols=30 Identities=27% Similarity=0.138 Sum_probs=25.9
Q ss_pred CccccccCCchHHHHHHHHhCceEEeeccc
Q 038818 240 TTAITTVDPLGPLCDIAKRYSIWVHVDAAY 269 (486)
Q Consensus 240 tt~~G~idpl~~I~~i~~~~g~~lhvD~a~ 269 (486)
.+..|..++++++++-|+++|+.+++|.+.
T Consensus 202 dp~~Gt~~dfk~Lv~~aH~~GI~VilD~V~ 231 (599)
T 3bc9_A 202 RTKYGTKGELENAIDALHNNDIKVYFDAVL 231 (599)
T ss_dssp SBTTBCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 345688899999999999999999999875
No 445
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=20.01 E-value=4.7e+02 Score=23.33 Aligned_cols=94 Identities=7% Similarity=-0.031 Sum_probs=57.0
Q ss_pred CeEEEecCCCch-HHHHHHHHcCCCCCCe-EEEecCCCC-------Cc----ccCHHHHHHHHHHHHHCCCccEEEEeec
Q 038818 172 RLVVYGSDQTHS-ALQKAAQIAGIDPKNF-RAIKTTKSS-------SF----TLTPESLQAAIDLDIQAGLIPLFLCATV 238 (486)
Q Consensus 172 ~~~v~~s~~~H~-s~~~a~~~~G~g~~~v-~~v~~d~~~-------~~----~~d~~~L~~~l~~~~~~g~~p~~vv~~~ 238 (486)
=...+.+...|. .+.+.++..|. +| +.+|..+.+ .+ .|+.+++++.|+...+.-..-+.|.=-.
T Consensus 57 vT~Ai~P~~p~~~~~a~~A~~~G~---EvllHlPMep~~~p~~~~gp~~L~~~~s~~ei~~~l~~al~~vP~a~GvnNHm 133 (261)
T 2qv5_A 57 VTLGFAASGNSLQRWMQDARREGH---EILLQIPLEPFGYPGTNPGPDTLLAGDPAKVNIDRLHRSMAKITNYTGVMNYL 133 (261)
T ss_dssp SEEEEETTCSSHHHHHHHHHHHTC---CEEEEEEECCTTTTTSCCCTTCBCTTSCHHHHHHHHHHHHTTCCCCSEEEEEE
T ss_pred eEEEECCCCCCHHHHHHHHHHCCC---EEEEECCCCCCCCCCCCCCcCcCcCCCCHHHHHHHHHHHHHHCCCcEEEeccc
Confidence 344555655553 35666677776 54 455654321 11 3789999999998765422112222223
Q ss_pred CCccccccCCchHHHHHHHHhCceEEeecc
Q 038818 239 GTTAITTVDPLGPLCDIAKRYSIWVHVDAA 268 (486)
Q Consensus 239 gtt~~G~idpl~~I~~i~~~~g~~lhvD~a 268 (486)
|+-.|..-..++.+.+.++++|++++=+.+
T Consensus 134 GS~~T~~~~~M~~vm~~L~~~gL~FlDS~T 163 (261)
T 2qv5_A 134 GGRFLAEQSALEPVMRDIGKRGLLFLDDGS 163 (261)
T ss_dssp CTTGGGCHHHHHHHHHHHHHTTCEEEECSC
T ss_pred ccchhcCHHHHHHHHHHHHHCCCEEEcCCC
Confidence 555566667789999999999987764443
Done!