BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038821
(136 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q38836|AGL11_ARATH Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana
GN=AGL11 PE=1 SV=1
Length = 230
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/142 (59%), Positives = 108/142 (76%), Gaps = 12/142 (8%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
ES KLRQQIQ NSNR+LMGDSLSSL+VKELKQ+ENRLE+ I+R R KKHE+ L EIE
Sbjct: 93 ESAKLRQQIQTIQNSNRNLMGDSLSSLSVKELKQVENRLEKAISRIRSKKHELLLVEIEN 152
Query: 61 LQKREIELENESVCLRSKVCKSVRSEMERFQQAN--TVTGQELSAIHALASRNFFSPAII 118
QKREIEL+NE++ LR+KV +E+ER+QQ + V+G E++AI ALASRN+F+ +I+
Sbjct: 153 AQKREIELDNENIYLRTKV-----AEVERYQQHHHQMVSGSEINAIEALASRNYFAHSIM 207
Query: 119 EG-----GGTAYSHPDKKILYL 135
G +YS PDKKIL+L
Sbjct: 208 TAGSGSGNGGSYSDPDKKILHL 229
>sp|Q8RU31|MAD21_ORYSJ MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica
GN=MADS21 PE=2 SV=1
Length = 265
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 87/130 (66%), Gaps = 14/130 (10%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E+ K+R QIQ N+NRHL+G+S+ ++T KELK LENRLE+GI+R R KKHE+ +EIE+
Sbjct: 95 EAAKMRHQIQTLQNANRHLIGESIGNMTAKELKSLENRLEKGISRIRSKKHELLFSEIEY 154
Query: 61 LQKREIELENESVCLRSKVCKSVRSEMERFQQA-------------NTVTGQELSAIHA- 106
+QKRE +L+NE++ LR+KV ++ R+E + Q A + +G EL A+ A
Sbjct: 155 MQKREADLQNENMFLRAKVAEAERAEHDDQQAAEDDEMAPAPAVGGGSSSGTELEALPAT 214
Query: 107 LASRNFFSPA 116
+R ++ PA
Sbjct: 215 FDTREYYQPA 224
>sp|P29385|AGL5_ARATH Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5
PE=1 SV=1
Length = 246
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 75/105 (71%), Gaps = 11/105 (10%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E+ KLR+QI+ N NRH++G+SL SL KELK LE+RLE+GI+R R KKHEM +AEIE+
Sbjct: 108 EASKLRRQIRDIQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEY 167
Query: 61 LQKREIELENESVCLRSKVCKSVRSEMERFQQANTVTGQELSAIH 105
+QKREIEL+N+++ LRSK+ +E QQ QE S IH
Sbjct: 168 MQKREIELQNDNMYLRSKI-----TERTGLQQ------QESSVIH 201
>sp|Q2QW53|MAD13_ORYSJ MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica
GN=MADS13 PE=1 SV=2
Length = 270
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 68/79 (86%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
ES KLR QIQM N+N+HL+GD++S+L++KELKQLE+RLE+GI++ R +K+E+ +EI +
Sbjct: 96 ESAKLRHQIQMLQNTNKHLVGDNVSNLSLKELKQLESRLEKGISKIRARKNELLASEINY 155
Query: 61 LQKREIELENESVCLRSKV 79
+ KREIEL+N+++ LR+K+
Sbjct: 156 MAKREIELQNDNMDLRTKI 174
>sp|P29381|AGL1_ARATH Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1
PE=1 SV=1
Length = 248
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 67/84 (79%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E+ KLR+QI+ NSNRH++G+SL SL KELK LE RLE+GI+R R KK+E+ +AEIE+
Sbjct: 108 EASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEY 167
Query: 61 LQKREIELENESVCLRSKVCKSVR 84
+QKRE+EL++ ++ LR+K+ + R
Sbjct: 168 MQKREMELQHNNMYLRAKIAEGAR 191
>sp|Q40704|MADS3_ORYSJ MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica
GN=MADS3 PE=2 SV=1
Length = 236
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 84/126 (66%), Gaps = 12/126 (9%)
Query: 1 ESVKLRQQIQMSLNSN-RHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIE 59
ES KLRQQI N+N R ++GDS++++++++LKQ+ENRLE+GI + R +K+E+ AE+E
Sbjct: 93 ESSKLRQQISSLQNANSRTIVGDSINTMSLRDLKQVENRLEKGIAKIRARKNELLYAEVE 152
Query: 60 FLQKREIELENESVCLRSKVCKSVRSEMERFQQANTVTGQELSAIH------ALASRNFF 113
++QKRE+EL+N+++ LRSKV E ER QQ + G ++ + SRNF
Sbjct: 153 YMQKREVELQNDNMYLRSKVV-----ENERGQQPLNMMGAASTSEYDHMVNNPYDSRNFL 207
Query: 114 SPAIIE 119
I++
Sbjct: 208 QVNIMQ 213
>sp|P17839|AG_ARATH Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1
SV=2
Length = 252
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 78/131 (59%), Gaps = 5/131 (3%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
ES KLRQQI NSNR LMG+++ S++ KEL+ LE RLER ITR R KK+E+ +EI++
Sbjct: 109 ESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDY 168
Query: 61 LQKREIELENESVCLRSKVCKSVRSE-----MERFQQANTVTGQELSAIHALASRNFFSP 115
+QKRE++L N++ LR+K+ ++ R+ M + + SRN+F
Sbjct: 169 MQKREVDLHNDNQILRAKIAENERNNPSISLMPGGSNYEQLMPPPQTQSQPFDSRNYFQV 228
Query: 116 AIIEGGGTAYS 126
A ++ YS
Sbjct: 229 AALQPNNHHYS 239
>sp|Q40872|AG_PANGI Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1
Length = 242
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 78/116 (67%), Gaps = 7/116 (6%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E+ KLRQ+I +NR++MG+SL SLTV++LK LE +LE+GI+R R KK+E+ AEIE+
Sbjct: 109 EASKLRQEISSIQKNNRNMMGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEIEY 168
Query: 61 LQKREIELENESVCLRSKVCKSVRSEMERFQQANTVTGQ---ELSAIHALASRNFF 113
+QK+EI+L N + LR+K+ ++ R++ Q N + G EL+ + RN+
Sbjct: 169 MQKKEIDLHNNNQYLRAKIAENERAQ----QHMNLMPGSSDYELAPPQSFDGRNYI 220
>sp|Q01540|AG_BRANA Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1
Length = 252
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 77/131 (58%), Gaps = 5/131 (3%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
ES KLRQQI NSNR LMG+++ S++ KEL+ LE RL+R + R R KK+E+ AEI++
Sbjct: 109 ESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLDRSVNRIRSKKNELLFAEIDY 168
Query: 61 LQKREIELENESVCLRSKVCKSVRSE-----MERFQQANTVTGQELSAIHALASRNFFSP 115
+QKRE++L N++ LR+K+ ++ R+ M + + SRN+F
Sbjct: 169 MQKREVDLHNDNQLLRAKIAENERNNPSMSLMPGGSNYEQIMPPPQTQPQPFDSRNYFQV 228
Query: 116 AIIEGGGTAYS 126
A ++ YS
Sbjct: 229 AALQPNNHHYS 239
>sp|Q40168|AG_SOLLC Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2
SV=1
Length = 248
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 72/98 (73%), Gaps = 1/98 (1%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E+ KLR QI +N NR++MG++L+ + +KELK LE R+E+GI++ R KK+E+ AEIE+
Sbjct: 109 EASKLRAQIGNLMNQNRNMMGEALAGMKLKELKNLEQRIEKGISKIRSKKNELLFAEIEY 168
Query: 61 LQKREIELENESVCLRSKVCKSVRSEMERFQQANTVTG 98
+QKRE++L N + LR+K+ ++ R++ + QQ N + G
Sbjct: 169 MQKREVDLHNNNQYLRAKIAETERAQ-HQHQQMNLMPG 205
>sp|Q2V0P1|MAD58_ORYSJ MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica
GN=MADS58 PE=2 SV=1
Length = 272
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 66/84 (78%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E+ KL+QQI NSNR L+GD+++++ +ELKQLE RL++G+ + R +K+E+ AEIE+
Sbjct: 135 EAAKLKQQITNLQNSNRTLVGDNITTMNHRELKQLEGRLDKGLGKIRARKNELLCAEIEY 194
Query: 61 LQKREIELENESVCLRSKVCKSVR 84
+Q+RE EL+N+++ L+SKV +S R
Sbjct: 195 MQRRETELQNDNMYLKSKVAESER 218
>sp|Q40885|AG_PETHY Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=1 SV=1
Length = 242
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 69/98 (70%), Gaps = 5/98 (5%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E+ KLR QI N NR+ +G+SL++L +++L+ LE ++E+GI++ R KK+E+ AEIE+
Sbjct: 109 EASKLRAQIGNLQNQNRNFLGESLAALNLRDLRNLEQKIEKGISKIRAKKNELLFAEIEY 168
Query: 61 LQKREIELENESVCLRSKVCKSVRSEMERFQQANTVTG 98
+QKREI+L N + LR+K+ +E ER QQ N + G
Sbjct: 169 MQKREIDLHNNNQYLRAKI-----AETERSQQMNLMPG 201
>sp|Q43585|AG_TOBAC Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2
SV=1
Length = 248
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 66/85 (77%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E+ KLR QI N NR+++G+SL++L++++LK LE ++E+GI++ R KK+E+ AEIE+
Sbjct: 109 EASKLRAQIGNLQNQNRNMLGESLAALSLRDLKNLEQKIEKGISKIRSKKNELLFAEIEY 168
Query: 61 LQKREIELENESVCLRSKVCKSVRS 85
+QKREI+L N + LR+K+ ++ R+
Sbjct: 169 MQKREIDLHNNNQYLRAKIAETERA 193
>sp|Q2QQA3|MAD20_ORYSJ MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica
GN=MADS20 PE=2 SV=2
Length = 233
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 51/83 (61%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
+ +KLR +I+ S R+LMG L SLT+++++QLEN+++ + R +K ++ + +
Sbjct: 97 DHIKLRGRIEALKKSQRNLMGQELDSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTI 156
Query: 61 LQKREIELENESVCLRSKVCKSV 83
L+K+ ELE C+R+ K+
Sbjct: 157 LEKKITELETLHTCIRASPTKAA 179
>sp|Q9SAR1|MADS8_ORYSJ MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica
GN=MADS8 PE=1 SV=1
Length = 248
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E +KL+ +++ + R+L+G+ L +L +KEL+QLE +L+ + R + + L ++
Sbjct: 96 EYLKLKARVENLQRTQRNLLGEDLGTLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLTD 155
Query: 61 LQKREIELENESVCLRSKVCKSVRSEMERFQQANTVTGQELSAIHALASRNFFSPAIIEG 120
LQ+RE L + CLR K+ +S + + ++ T+ G E + HA+ +
Sbjct: 156 LQRREQMLCEANKCLRRKLEESNQLHGQVWEHGATLLGYERQSPHAVQQ-------VPPH 208
Query: 121 GGTAYSH 127
GG + H
Sbjct: 209 GGNGFFH 215
>sp|Q0D4T4|MAD18_ORYSJ MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica
GN=MADS18 PE=1 SV=1
Length = 249
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 42/62 (67%)
Query: 15 SNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEFLQKREIELENESVC 74
S R L+G+ L +LT+KEL+QLE++LE + R KK+++ I LQK+E L+N++
Sbjct: 108 SQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNV 167
Query: 75 LR 76
L+
Sbjct: 168 LQ 169
>sp|A2YNI2|MAD18_ORYSI MADS-box transcription factor 18 OS=Oryza sativa subsp. indica
GN=MADS18 PE=2 SV=2
Length = 249
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 42/62 (67%)
Query: 15 SNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEFLQKREIELENESVC 74
S R L+G+ L +LT+KEL+QLE++LE + R KK+++ I LQK+E L+N++
Sbjct: 108 SQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNV 167
Query: 75 LR 76
L+
Sbjct: 168 LQ 169
>sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica
GN=MADS27 PE=2 SV=2
Length = 240
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E+ LRQQ+ ++R LMG+ LS L VKEL+ LEN+LE + R KK + + EI
Sbjct: 92 EAASLRQQLHNLQENHRQLMGEDLSGLNVKELQSLENQLEISLRSVRTKKDHVLIDEIHE 151
Query: 61 LQKREIELENESVCLRSKVC 80
L ++ + E++ L K+
Sbjct: 152 LNRKGSLVHQENMELYKKIS 171
>sp|A2RVQ5|AGL16_ARATH Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana
GN=AGL16 PE=1 SV=1
Length = 240
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 61/107 (57%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E+ L++Q+ ++R +MG+ LS L+V+ L+ LEN+LE + R KK +M + EI+
Sbjct: 92 EAAILKRQLHNLQENHRQMMGEELSGLSVEALQNLENQLELSLRGVRMKKDQMLIEEIQV 151
Query: 61 LQKREIELENESVCLRSKVCKSVRSEMERFQQANTVTGQELSAIHAL 107
L + + E++ L KV + ME ++ + V G +++ ++L
Sbjct: 152 LNREGNLVHQENLDLHKKVNLMHQQNMELHEKVSEVEGVKIANKNSL 198
>sp|O82743|AGL19_ARATH Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana
GN=AGL19 PE=1 SV=1
Length = 219
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 50/78 (64%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E+ L ++I+ S R L+G+ + + +++EL+QLEN+L+R ++R R KK+++ EIE
Sbjct: 92 ETSGLTKKIEQLEISKRKLLGEGIDACSIEELQQLENQLDRSLSRIRAKKYQLLREEIEK 151
Query: 61 LQKREIELENESVCLRSK 78
L+ E L E+ L+ K
Sbjct: 152 LKAEERNLVKENKDLKEK 169
>sp|Q6EU39|MADS6_ORYSJ MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica
GN=MADS6 PE=1 SV=1
Length = 250
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 19/129 (14%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E KL+ + + + RHL+G+ L L+VKEL+QLE +LE +++ R +K ++ + ++E
Sbjct: 92 EMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEE 151
Query: 61 LQKREIELENESVCLRSKV-CKSVRSEMERFQQANTVTGQELSAIHALASRNFFSPAIIE 119
L+++E +L + L+ K+ + S QQA+ G A++E
Sbjct: 152 LRRKERQLGEINRQLKHKLEVEGSTSNYRAMQQASWAQG-----------------AVVE 194
Query: 120 GGGTAYSHP 128
G AY P
Sbjct: 195 -NGAAYVQP 202
>sp|Q42429|AGL8_SOLTU Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum
PE=2 SV=1
Length = 250
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 12/136 (8%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E KL+ ++++ + +H +G+ L SL +KEL+ LE++L+ + R +K+++ I
Sbjct: 94 EHAKLKARLEVLQRNQKHYVGEDLESLNMKELQNLEHQLDSALKHIRSRKNQLMHESISV 153
Query: 61 LQKREIELENESVCLRSKVC---KSVRSEMERFQQANTVTG------QELSAIH---ALA 108
LQK++ L+ ++ L KV K V + + QQ + + Q+L + H A
Sbjct: 154 LQKQDRALQEQNNQLSKKVKEREKEVAQQNQWDQQNHEINSSTFVLPQQLDSPHLGEAYQ 213
Query: 109 SRNFFSPAIIEGGGTA 124
+ N +EGG ++
Sbjct: 214 NTNVVDNGEVEGGNSS 229
>sp|Q6Z6W2|MAD57_ORYSJ MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica
GN=MADS57 PE=2 SV=2
Length = 241
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E+ LRQQ+ S++ LMG+ LS L V++L+ LENRLE + R +K + +EIE
Sbjct: 91 EAASLRQQLHNLQESHKQLMGEELSGLGVRDLQGLENRLEISLRNIRMRKDNLLKSEIEE 150
Query: 61 L 61
L
Sbjct: 151 L 151
>sp|P29386|AGL6_ARATH Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6
PE=1 SV=2
Length = 252
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 45/68 (66%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E KL+ + + + +NR+L+G+ L + VKEL+ LE +LE +T R +K ++ + E+E
Sbjct: 92 EVTKLKSKYESLVRTNRNLLGEDLGEMGVKELQALERQLEAALTATRQRKTQVMMEEMED 151
Query: 61 LQKREIEL 68
L+K+E +L
Sbjct: 152 LRKKERQL 159
>sp|Q38876|AGL8_ARATH Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8
PE=1 SV=1
Length = 242
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 48/79 (60%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E KL+ ++++ + R+ MG+ L SL++KEL+ LE++L+ I R +K++ I
Sbjct: 94 EHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISA 153
Query: 61 LQKREIELENESVCLRSKV 79
LQK++ L++ + L K+
Sbjct: 154 LQKKDKALQDHNNSLLKKI 172
>sp|Q38694|AGL9_ARADE Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2
SV=1
Length = 250
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E +KL+ +++ S R+L+G+ L L KEL+QLE +L+ + + R + + L ++
Sbjct: 93 EYLKLKNRVEALQRSQRNLLGEDLGPLGSKELEQLERQLDSSLRQIRSTRTQFMLDQLAD 152
Query: 61 LQKREIELENESVCLRSKVCKSVRSEMERFQQANTVTGQELSAIHALASRNFFSPAIIEG 120
LQ+RE + +C + K+++ E QAN + S HA+ + +
Sbjct: 153 LQRRE-----QMLC---EANKTLKRRFEESSQANQQQVWDPSNTHAVG----YGRQPAQH 200
Query: 121 GGTAYSHP 128
G A+ HP
Sbjct: 201 HGEAFYHP 208
>sp|Q9XJ66|MAD22_ORYSJ MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica
GN=MADS22 PE=2 SV=1
Length = 228
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 17 RHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEFLQKREIELENESVCLR 76
R + G+ L L++ EL+QLE LE G+ R K + + +I LQ++ +L E++ LR
Sbjct: 108 RQMRGEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLR 167
Query: 77 SKVCKSVRSEMERFQQANTVT-GQE----LSAIHALASRN 111
++V + +E + N VT GQ ++A+H+ +S++
Sbjct: 168 NQVSQISPAEKQVVDTENFVTEGQSSESVMTALHSGSSQS 207
>sp|Q39685|CMB1_DIACA MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1
Length = 233
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E +KL+ ++ + S+R+L+G+ L L+ KEL+QLE++L++ + + R K + L ++
Sbjct: 93 EYLKLKAKVDVLQRSHRNLLGEDLGELSTKELEQLEHQLDKSLRQIRSIKTQHMLDQLAD 152
Query: 61 LQKREIELENESVCLRSKV---CKSVRSEME 88
LQK+E L + L++K+ C S R +
Sbjct: 153 LQKKEEMLFESNRALKTKLEESCASFRPNWD 183
>sp|Q10PZ9|MADS1_ORYSJ MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica
GN=MADS1 PE=1 SV=1
Length = 257
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 53/79 (67%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E +KL+ +++ + R+++G+ L L++KEL+QLEN++E + + R +K++ L ++
Sbjct: 91 EYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFD 150
Query: 61 LQKREIELENESVCLRSKV 79
L+ +E +L++ + LR K+
Sbjct: 151 LKSKEQQLQDLNKDLRKKL 169
>sp|A2XDY1|MADS1_ORYSI MADS-box transcription factor 1 OS=Oryza sativa subsp. indica
GN=MADS1 PE=2 SV=2
Length = 257
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 53/79 (67%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E +KL+ +++ + R+++G+ L L++KEL+QLEN++E + + R +K++ L ++
Sbjct: 91 EYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFD 150
Query: 61 LQKREIELENESVCLRSKV 79
L+ +E +L++ + LR K+
Sbjct: 151 LKSKEQQLQDLNKDLRKKL 169
>sp|Q7XUN2|MAD17_ORYSJ MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica
GN=MADS17 PE=1 SV=2
Length = 249
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 47/68 (69%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E +L+ +++ S RH++G+ L L++KEL+QLE +LE +++ R +K ++ + +++
Sbjct: 94 EMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDD 153
Query: 61 LQKREIEL 68
L+++E +L
Sbjct: 154 LRRKERQL 161
>sp|Q40170|AGL8_SOLLC Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum
GN=TDR4 PE=2 SV=1
Length = 227
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 68/126 (53%), Gaps = 14/126 (11%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E KL+ ++++ + +H +G+ L SL++KEL+ LE++L+ + R +K+++ I
Sbjct: 94 EHRKLKARLEVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISV 153
Query: 61 LQKREIELENESVCLRSKVCKSVRSEMERFQQANTVTGQELSAIHALASRNFF-----SP 115
LQK++ L+ ++ L KV ER + A ++G S++ A +F+ S
Sbjct: 154 LQKKDRALQEQNNQLSKKV-------KEREKSAQQISGINSSSL--FAHTDFYLGTYQST 204
Query: 116 AIIEGG 121
+I+ G
Sbjct: 205 NVIDNG 210
>sp|Q0DEB8|MADS5_ORYSJ MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica
GN=MADS5 PE=1 SV=1
Length = 225
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 52/79 (65%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E +KL+ +++ + R+L+G+ L L++KEL+QLEN++E + R K++ L ++
Sbjct: 95 EYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFE 154
Query: 61 LQKREIELENESVCLRSKV 79
L+++E +L++ + L+ K+
Sbjct: 155 LKRKEQQLQDANKDLKRKI 173
>sp|A2Y9P0|MADS5_ORYSI MADS-box transcription factor 5 OS=Oryza sativa subsp. indica
GN=MADS5 PE=2 SV=1
Length = 225
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 52/79 (65%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E +KL+ +++ + R+L+G+ L L++KEL+QLEN++E + R K++ L ++
Sbjct: 95 EYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFE 154
Query: 61 LQKREIELENESVCLRSKV 79
L+++E +L++ + L+ K+
Sbjct: 155 LKRKEQQLQDANKDLKRKI 173
>sp|Q41274|AGL8_SINAL Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8
PE=2 SV=1
Length = 241
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E KL+ ++++ + R+ MG+ L SL++KEL+ LE++L I R +K++ I
Sbjct: 94 EHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISA 153
Query: 61 LQKREIELENESVCLRSKV 79
LQK++ L++ + L K+
Sbjct: 154 LQKKDKVLQDHNNALLKKI 172
>sp|Q9SBK9|CAL_BRARP Transcription factor CAULIFLOWER OS=Brassica rapa subsp. pekinensis
GN=CAL PE=2 SV=1
Length = 254
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 68/127 (53%), Gaps = 6/127 (4%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E +L+ +I++ + RH +G+ L S+++KEL+ LE +L+ + R +K+++ +
Sbjct: 96 EYSRLKAKIELLERNQRHYLGEDLESISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNH 155
Query: 61 LQKREIELENESVCL------RSKVCKSVRSEMERFQQANTVTGQELSAIHALASRNFFS 114
LQ++E E+ E+ L R + ++ +++ E+ +++ V Q ++ + S
Sbjct: 156 LQRKEKEILEENSMLTKQIKERESILRTHQNQSEQQNRSHHVAPQPQPQLNPYMISHQAS 215
Query: 115 PAIIEGG 121
P + GG
Sbjct: 216 PFLSMGG 222
>sp|Q6H711|MAD29_ORYSJ MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica
GN=MADS29 PE=2 SV=1
Length = 260
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 61/108 (56%), Gaps = 8/108 (7%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E ++R +++ R GD LS+LT+ ++ LE +LE +T+ R +KH++ +++
Sbjct: 91 EMTRMRNEMEKLDGGIRRFTGDDLSNLTLADINDLEQQLEFSVTKVRARKHQLLNQQLDN 150
Query: 61 LQKREIELENESVCLRSKVCKSVRSEMERFQQANTVTGQELSAIHALA 108
L+++E LE+++ S +C+ + E QA V G ++ A+ +A
Sbjct: 151 LRRKEHILEDQN----SFLCRMIN---ENHHQA-AVGGGDVKAMVEMA 190
>sp|Q6R4S6|CAL_BRARC Transcription factor CAULIFLOWER OS=Brassica rapa subsp. chinensis
GN=CAL PE=2 SV=1
Length = 254
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 68/127 (53%), Gaps = 6/127 (4%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E +L+ +I++ + RH +G+ L S+++KEL+ LE +L+ + R +K+++ +
Sbjct: 96 EYSRLKAKIELLERNQRHYLGEDLESISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNH 155
Query: 61 LQKREIELENESVCL------RSKVCKSVRSEMERFQQANTVTGQELSAIHALASRNFFS 114
LQ++E E+ E+ L R + ++ +++ E+ +++ V Q ++ + S
Sbjct: 156 LQRKEKEILEENSMLTKQIKERESILRTHQNQSEQQNRSHHVAPQPQPQLNPYMISHQAS 215
Query: 115 PAIIEGG 121
P + GG
Sbjct: 216 PFLNMGG 222
>sp|Q6R4S3|CAL_BRARA Transcription factor CAULIFLOWER OS=Brassica rapa GN=CAL PE=2 SV=1
Length = 254
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 68/127 (53%), Gaps = 6/127 (4%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E +L+ +I++ + RH +G+ L S+++KEL+ LE +L+ + R +K+++ +
Sbjct: 96 EYSRLKAKIELLERNQRHYLGEDLESISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNH 155
Query: 61 LQKREIELENESVCL------RSKVCKSVRSEMERFQQANTVTGQELSAIHALASRNFFS 114
LQ++E E+ E+ L R + ++ +++ E+ +++ V Q ++ + S
Sbjct: 156 LQRKEKEILEENSMLTKQIKERESILRTHQNQSEQQNRSHHVAPQPQPQLNPYMISHQAS 215
Query: 115 PAIIEGG 121
P + GG
Sbjct: 216 PFLNMGG 222
>sp|Q9SZJ6|AGL21_ARATH Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana
GN=AGL21 PE=1 SV=1
Length = 228
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 54/93 (58%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E+ LRQ++ ++R +MG+ L+ L+V EL LEN++E + R +K ++ EI+
Sbjct: 92 EAAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIEISLRGIRMRKEQLLTQEIQE 151
Query: 61 LQKREIELENESVCLRSKVCKSVRSEMERFQQA 93
L ++ + E++ L KV + + +E +++A
Sbjct: 152 LSQKRNLIHQENLDLSRKVQRIHQENVELYKKA 184
>sp|Q84NC5|MAD25_ORYSJ MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica
GN=MADS25 PE=2 SV=2
Length = 227
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E LRQQ+Q ++NR L+G+ +S+ TV++L+ L+N++E + R KK ++ EI
Sbjct: 92 EVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILK 151
Query: 61 LQKREIELENESVCLRSK 78
L ++ ++ E+ LR K
Sbjct: 152 LNEKGSLVQKENSELRKK 169
>sp|D7KWY6|AP1_ARALL Floral homeotic protein APETALA 1 OS=Arabidopsis lyrata subsp.
lyrata GN=AP1 PE=3 SV=1
Length = 256
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E +L+ +I++ + RH +G+ L++++ KEL+ LE +L+ + R +K+++ I
Sbjct: 94 EYNRLKAKIELLERNQRHYLGEDLNAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINE 153
Query: 61 LQKREIELENESVCLRSKVC---KSVRSEMERFQQAN 94
LQ++E ++ ++ L ++ K +R++ E++ Q N
Sbjct: 154 LQRKEKAIQEQNSMLSKQIKEREKILRAQQEQWDQQN 190
>sp|D7KQR8|CAL_ARALL Transcription factor CAULIFLOWER OS=Arabidopsis lyrata subsp.
lyrata GN=CAL PE=3 SV=1
Length = 256
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 48/79 (60%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E +L+ +I++ + RH +G+ L +++K+L+ LE +LE + R +K+++ +
Sbjct: 96 EYSRLKAKIELLERNQRHYLGEDLEPMSLKDLQNLEQQLETALKHIRSRKNQLMYESLNH 155
Query: 61 LQKREIELENESVCLRSKV 79
LQ++E E++ E+ L ++
Sbjct: 156 LQRKENEIQEENSMLTKQI 174
>sp|Q9FVC1|SVP_ARATH MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1
Length = 240
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 9/111 (8%)
Query: 17 RHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEFLQKREIELENESVCLR 76
R + G+ L L ++EL+QLE LE G+TR K + ++EI LQK+ ++L +E+
Sbjct: 109 RQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDEN---- 164
Query: 77 SKVCKSVRSEMERFQQANTVTGQEL-SAIHALASRNFFSPAIIEGGGTAYS 126
K +R + + + N G ++ + +HA + A+ E G ++ S
Sbjct: 165 ----KRLRQQGTQLTEENERLGMQICNNVHAHGGAESENAAVYEEGQSSES 211
>sp|P0DI14|AP1_BRARP Floral homeotic protein APETALA 1 OS=Brassica rapa subsp.
pekinensis GN=AP1 PE=3 SV=1
Length = 256
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E +L+ +I++ + RH +G+ L +++ KEL+ LE +L+ + R +K+++ +
Sbjct: 94 EYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDSVNE 153
Query: 61 LQKREIELENESVCLRSKVC---KSVRSEMERFQQAN 94
LQ++E ++ ++ L ++ K +R++ E++ Q N
Sbjct: 154 LQRKEKAIQEQNSMLSKQIKEREKVLRAQQEQWDQQN 190
>sp|Q39375|CAL_BRAOT Transcription factor CAULIFLOWER OS=Brassica oleracea var. italica
GN=CAL PE=2 SV=1
Length = 251
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 70/134 (52%), Gaps = 9/134 (6%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E +L+ +I++ + RH +G+ L S+++KEL+ LE +L+ + R +K+++ +
Sbjct: 96 EYSRLKAKIELLERNQRHYLGEDLESISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNH 155
Query: 61 LQKREIELENESVCL------RSKVCKSVRSEMERFQQANTVTGQELSAIHALASRNFFS 114
LQ++E E+ E+ L R + ++ +++ E+ +++ V Q ++ + S
Sbjct: 156 LQRKEKEILEENSMLAKQIRERESILRTHQNQSEQQNRSHHVAPQPQPQLNPYMAS---S 212
Query: 115 PAIIEGGGTAYSHP 128
P + GG +P
Sbjct: 213 PFLNMGGMYQGEYP 226
>sp|Q6Q9H6|MAD34_ORYSJ MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica
GN=MADS34 PE=2 SV=2
Length = 239
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 50/79 (63%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E V L+ +++ S R+L+G+ L+ L EL+QLE+++ R + + R +K ++ L E+
Sbjct: 94 EYVNLKAHVEILQQSQRNLLGEDLAPLATNELEQLESQVVRTLKQIRSRKTQVLLDELCD 153
Query: 61 LQKREIELENESVCLRSKV 79
L+++E L++ + L+ K+
Sbjct: 154 LKRKEQMLQDANRVLKRKL 172
>sp|Q69TG5|MAD55_ORYSJ MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica
GN=MADS55 PE=2 SV=2
Length = 245
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 17 RHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEFLQKREIELENESVCLR 76
R + G+ L L+V+EL+Q+E LE G+ R K + + EI LQ++ I+L E++ LR
Sbjct: 131 RQMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKGIQLAEENMRLR 190
Query: 77 SKV 79
++
Sbjct: 191 DQM 193
>sp|Q8VWM8|M17_MAIZE MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1
Length = 259
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 39/59 (66%)
Query: 17 RHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEFLQKREIELENESVCL 75
R GD LSSLT+ ++ LE +LE +++ R +KH++ +++ L+++E LE+++ L
Sbjct: 107 RRYTGDDLSSLTLDDVSDLEQQLEYSVSKVRARKHQLLNQQLDNLRRKEQILEDQNTFL 165
>sp|Q41276|AP1_SINAL Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1
Length = 254
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 1 ESVKLRQQIQMSLNSNRHLMGDSLSSLTVKELKQLENRLERGITRFRFKKHEMPLAEIEF 60
E +L+ +I++ + RH +G+ L +++ KEL+ LE +L+ + R +K+++ I
Sbjct: 94 EYNRLKAKIELLERNQRHYLGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSINE 153
Query: 61 LQKREIELENESVCLRSKVC---KSVRSEMERFQQAN 94
LQ++E ++ ++ L ++ K +R++ E++ Q N
Sbjct: 154 LQRKEKAIQEQNSMLSKQIKEREKILRAQQEQWDQQN 190
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.354
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,884,534
Number of Sequences: 539616
Number of extensions: 1474309
Number of successful extensions: 5191
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 5032
Number of HSP's gapped (non-prelim): 199
length of query: 136
length of database: 191,569,459
effective HSP length: 101
effective length of query: 35
effective length of database: 137,068,243
effective search space: 4797388505
effective search space used: 4797388505
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)