Query 038822
Match_columns 162
No_of_seqs 120 out of 1206
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 05:32:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038822.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038822hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g2e_A Peroxiredoxin; redox pr 100.0 1.2E-38 4E-43 223.9 13.1 148 3-160 3-151 (157)
2 4gqc_A Thiol peroxidase, perox 100.0 4.4E-39 1.5E-43 227.7 10.0 151 1-161 1-154 (164)
3 3uma_A Hypothetical peroxiredo 100.0 1.8E-38 6.1E-43 228.5 13.3 154 1-162 23-184 (184)
4 1tp9_A Peroxiredoxin, PRX D (t 100.0 1.1E-35 3.9E-40 209.5 16.8 157 1-162 1-162 (162)
5 4f82_A Thioredoxin reductase; 100.0 7.8E-36 2.7E-40 212.4 15.9 157 3-162 9-174 (176)
6 3mng_A Peroxiredoxin-5, mitoch 100.0 5.8E-36 2E-40 213.5 15.3 153 2-162 13-173 (173)
7 3sbc_A Peroxiredoxin TSA1; alp 100.0 2E-36 6.9E-41 221.6 12.7 148 4-162 23-176 (216)
8 3tue_A Tryparedoxin peroxidase 100.0 1.6E-35 5.6E-40 217.2 16.4 150 3-162 25-180 (219)
9 2xhf_A Peroxiredoxin 5; oxidor 100.0 2.2E-35 7.4E-40 209.6 14.2 155 2-162 12-169 (171)
10 2pwj_A Mitochondrial peroxired 100.0 1.4E-34 4.9E-39 205.8 14.9 153 5-162 8-171 (171)
11 2wfc_A Peroxiredoxin 5, PRDX5; 100.0 7.3E-34 2.5E-38 201.5 13.4 153 3-162 2-159 (167)
12 1xiy_A Peroxiredoxin, pfaop; a 100.0 9.1E-34 3.1E-38 203.4 12.9 152 4-162 1-177 (182)
13 3gkn_A Bacterioferritin comigr 100.0 1.6E-33 5.4E-38 197.9 10.3 148 1-160 4-155 (163)
14 2c0d_A Thioredoxin peroxidase 100.0 1.7E-32 5.9E-37 202.5 15.3 144 1-160 22-177 (221)
15 3tjj_A Peroxiredoxin-4; thiore 100.0 3.1E-32 1.1E-36 204.9 15.4 147 2-161 60-214 (254)
16 3drn_A Peroxiredoxin, bacterio 100.0 1.6E-32 5.6E-37 192.8 11.9 140 3-161 1-143 (161)
17 3ixr_A Bacterioferritin comigr 100.0 2.9E-33 1E-37 200.2 8.1 148 2-161 19-172 (179)
18 2v2g_A Peroxiredoxin 6; oxidor 100.0 1.5E-32 5.2E-37 204.2 12.1 148 1-161 1-159 (233)
19 1nm3_A Protein HI0572; hybrid, 100.0 6.7E-32 2.3E-36 201.2 14.9 150 4-161 3-161 (241)
20 1q98_A Thiol peroxidase, TPX; 100.0 9.1E-32 3.1E-36 189.8 14.2 147 3-162 16-164 (165)
21 1prx_A HORF6; peroxiredoxin, h 100.0 4.1E-32 1.4E-36 200.8 12.9 148 1-161 1-163 (224)
22 3qpm_A Peroxiredoxin; oxidored 100.0 4.8E-32 1.6E-36 202.4 13.3 146 3-161 47-200 (240)
23 1xcc_A 1-Cys peroxiredoxin; un 100.0 4.6E-32 1.6E-36 200.0 11.9 148 1-161 1-160 (220)
24 2pn8_A Peroxiredoxin-4; thiore 100.0 1.1E-31 3.7E-36 196.8 12.1 146 3-161 18-171 (211)
25 1n8j_A AHPC, alkyl hydroperoxi 100.0 2E-31 6.8E-36 191.8 12.9 140 5-160 2-149 (186)
26 3zrd_A Thiol peroxidase; oxido 100.0 2.2E-31 7.5E-36 193.8 13.0 147 3-162 51-199 (200)
27 3p7x_A Probable thiol peroxida 100.0 1.9E-31 6.5E-36 188.3 10.7 142 3-161 19-162 (166)
28 3keb_A Probable thiol peroxida 100.0 1.3E-30 4.6E-35 191.9 14.6 143 3-161 21-170 (224)
29 1zye_A Thioredoxin-dependent p 100.0 2.1E-30 7.1E-35 191.1 15.5 145 3-160 26-178 (220)
30 2bmx_A Alkyl hydroperoxidase C 100.0 1.3E-30 4.6E-35 188.4 14.1 143 1-160 1-163 (195)
31 2i81_A 2-Cys peroxiredoxin; st 100.0 7E-31 2.4E-35 192.8 12.8 142 3-160 20-173 (213)
32 1psq_A Probable thiol peroxida 100.0 5E-31 1.7E-35 185.6 11.3 143 3-161 15-159 (163)
33 1uul_A Tryparedoxin peroxidase 100.0 8.1E-31 2.8E-35 190.6 12.6 143 2-160 4-158 (202)
34 3ztl_A Thioredoxin peroxidase; 100.0 2.1E-30 7E-35 191.3 13.6 146 3-161 39-192 (222)
35 2h01_A 2-Cys peroxiredoxin; th 100.0 2.1E-30 7.1E-35 186.9 13.3 128 5-146 1-140 (192)
36 2a4v_A Peroxiredoxin DOT5; yea 100.0 7.8E-31 2.7E-35 183.7 9.4 129 3-146 6-136 (159)
37 1we0_A Alkyl hydroperoxide red 100.0 6.7E-30 2.3E-34 183.5 14.1 129 4-146 1-138 (187)
38 1qmv_A Human thioredoxin perox 100.0 2.8E-30 9.7E-35 187.0 12.2 144 2-161 3-157 (197)
39 2yzh_A Probable thiol peroxida 100.0 1.5E-30 5.1E-35 184.4 10.2 144 3-160 20-165 (171)
40 3a2v_A Probable peroxiredoxin; 100.0 4.3E-30 1.5E-34 192.4 12.4 144 3-161 4-156 (249)
41 1xvw_A Hypothetical protein RV 100.0 4.2E-30 1.4E-34 179.7 10.9 143 3-161 8-154 (160)
42 1zof_A Alkyl hydroperoxide-red 100.0 1.9E-29 6.4E-34 182.7 12.6 129 4-146 1-142 (198)
43 4eo3_A Bacterioferritin comigr 100.0 5.6E-30 1.9E-34 198.5 8.7 130 9-161 3-133 (322)
44 1xvq_A Thiol peroxidase; thior 100.0 2.4E-28 8.3E-33 173.8 13.4 145 3-161 17-162 (175)
45 3u5r_E Uncharacterized protein 100.0 7.9E-29 2.7E-33 182.3 10.6 138 3-161 31-184 (218)
46 3gl3_A Putative thiol:disulfid 100.0 4.6E-28 1.6E-32 167.6 13.1 137 1-161 1-139 (152)
47 1xzo_A BSSCO, hypothetical pro 100.0 1.3E-27 4.4E-32 168.9 13.6 135 3-147 6-156 (174)
48 3ewl_A Uncharacterized conserv 100.0 5.7E-28 2E-32 165.5 11.0 130 5-161 2-138 (142)
49 3kcm_A Thioredoxin family prot 100.0 8.2E-28 2.8E-32 166.6 11.6 137 4-162 2-141 (154)
50 2lrn_A Thiol:disulfide interch 100.0 1.1E-27 3.8E-32 166.1 12.0 122 1-144 1-127 (152)
51 2jsy_A Probable thiol peroxida 99.9 6.3E-28 2.2E-32 169.9 10.3 142 3-160 17-160 (167)
52 3fw2_A Thiol-disulfide oxidore 99.9 7E-28 2.4E-32 166.8 10.1 122 2-144 3-134 (150)
53 3hcz_A Possible thiol-disulfid 99.9 2.9E-27 9.8E-32 162.4 11.4 124 2-146 3-131 (148)
54 3eyt_A Uncharacterized protein 99.9 1E-27 3.6E-32 166.9 9.1 132 5-160 1-148 (158)
55 2gs3_A PHGPX, GPX-4, phospholi 99.9 1.3E-27 4.3E-32 171.5 9.6 147 1-160 20-182 (185)
56 3lor_A Thiol-disulfide isomera 99.9 1.2E-27 4E-32 166.8 8.9 135 1-160 1-151 (160)
57 3eur_A Uncharacterized protein 99.9 2.1E-27 7E-32 163.0 9.5 131 3-160 4-141 (142)
58 2f9s_A Thiol-disulfide oxidore 99.9 3.3E-27 1.1E-31 163.3 10.4 133 5-161 1-135 (151)
59 2v1m_A Glutathione peroxidase; 99.9 2.3E-27 8E-32 166.7 9.5 139 3-160 4-163 (169)
60 2obi_A PHGPX, GPX-4, phospholi 99.9 2.8E-27 9.7E-32 169.2 9.2 140 3-161 20-181 (183)
61 2l5o_A Putative thioredoxin; s 99.9 1.2E-26 4E-31 160.6 11.9 122 4-146 2-126 (153)
62 2p5q_A Glutathione peroxidase 99.9 2.8E-27 9.6E-32 166.4 8.5 139 3-160 5-164 (170)
63 2cvb_A Probable thiol-disulfid 99.9 9.3E-27 3.2E-31 166.9 10.7 118 3-142 6-132 (188)
64 3fkf_A Thiol-disulfide oxidore 99.9 9.6E-27 3.3E-31 159.8 10.4 122 2-144 3-132 (148)
65 3kh7_A Thiol:disulfide interch 99.9 1.4E-26 4.8E-31 164.8 11.3 121 2-147 28-153 (176)
66 3lwa_A Secreted thiol-disulfid 99.9 1.3E-26 4.6E-31 165.4 11.1 138 3-160 30-177 (183)
67 4fo5_A Thioredoxin-like protei 99.9 1.3E-27 4.4E-32 164.2 5.2 132 3-162 6-143 (143)
68 2p31_A CL683, glutathione pero 99.9 1.9E-27 6.5E-32 170.0 6.2 139 3-162 22-179 (181)
69 2vup_A Glutathione peroxidase- 99.9 2.2E-27 7.5E-32 170.9 6.4 128 1-146 19-170 (190)
70 3hdc_A Thioredoxin family prot 99.9 7.2E-27 2.5E-31 163.1 8.8 124 2-148 13-137 (158)
71 1jfu_A Thiol:disulfide interch 99.9 8.9E-27 3E-31 166.6 9.3 142 3-161 33-177 (186)
72 3dwv_A Glutathione peroxidase- 99.9 3.2E-27 1.1E-31 169.7 5.9 137 3-160 19-179 (187)
73 2lja_A Putative thiol-disulfid 99.9 5.7E-26 2E-30 157.0 11.9 137 1-161 1-140 (152)
74 2b5x_A YKUV protein, TRXY; thi 99.9 2.4E-26 8.1E-31 157.7 9.4 134 4-160 1-141 (148)
75 3ia1_A THIO-disulfide isomeras 99.9 1.5E-26 5.1E-31 160.4 8.3 133 1-161 1-141 (154)
76 3me7_A Putative uncharacterize 99.9 2.2E-26 7.5E-31 163.1 8.8 133 4-146 1-146 (170)
77 3or5_A Thiol:disulfide interch 99.9 5.9E-26 2E-30 158.8 10.4 139 3-160 7-147 (165)
78 3erw_A Sporulation thiol-disul 99.9 4.5E-26 1.6E-30 155.8 9.1 132 3-159 8-144 (145)
79 2ywi_A Hypothetical conserved 99.9 5.6E-26 1.9E-30 163.6 9.9 123 3-145 17-149 (196)
80 4h86_A Peroxiredoxin type-2; o 99.9 5.6E-25 1.9E-29 157.8 15.0 157 4-162 26-199 (199)
81 2lrt_A Uncharacterized protein 99.9 1.1E-25 3.7E-30 156.6 10.9 121 3-146 8-133 (152)
82 2b7k_A SCO1 protein; metalloch 99.9 1.5E-25 5.1E-30 162.7 11.7 149 3-161 12-180 (200)
83 2ls5_A Uncharacterized protein 99.9 1.1E-27 3.7E-32 167.3 0.0 136 3-161 6-145 (159)
84 2k6v_A Putative cytochrome C o 99.9 1.9E-26 6.4E-31 162.5 5.0 147 4-162 10-171 (172)
85 2ggt_A SCO1 protein homolog, m 99.9 3.4E-25 1.2E-29 154.9 11.1 128 9-146 2-146 (164)
86 3cmi_A Peroxiredoxin HYR1; thi 99.9 3.1E-26 1.1E-30 162.0 5.4 132 7-160 9-164 (171)
87 2f8a_A Glutathione peroxidase 99.9 2.7E-25 9.1E-30 162.5 10.2 144 4-160 20-203 (208)
88 3raz_A Thioredoxin-related pro 99.9 9.6E-26 3.3E-30 156.2 7.2 129 10-161 3-137 (151)
89 4hde_A SCO1/SENC family lipopr 99.9 3.7E-24 1.3E-28 151.7 15.2 134 4-146 6-153 (170)
90 2hyx_A Protein DIPZ; thioredox 99.9 2E-25 6.8E-30 174.7 9.0 134 3-160 50-195 (352)
91 3kij_A Probable glutathione pe 99.9 1.5E-25 5.2E-30 159.9 7.0 144 4-160 12-170 (180)
92 2rli_A SCO2 protein homolog, m 99.9 1.7E-24 5.7E-29 152.4 12.1 127 11-147 7-150 (171)
93 3ha9_A Uncharacterized thiored 99.9 2E-25 7E-30 156.5 6.6 132 4-162 11-162 (165)
94 2i3y_A Epididymal secretory gl 99.9 2.9E-24 1E-28 157.8 13.0 132 4-146 29-196 (215)
95 2b1k_A Thiol:disulfide interch 99.9 9.7E-25 3.3E-29 153.5 9.5 121 2-146 20-145 (168)
96 1lu4_A Soluble secreted antige 99.9 1.5E-24 5.1E-29 146.8 9.9 130 8-161 2-133 (136)
97 4evm_A Thioredoxin family prot 99.9 1.7E-24 5.7E-29 146.1 10.1 130 9-162 1-137 (138)
98 2r37_A Glutathione peroxidase 99.9 3.7E-24 1.3E-28 156.4 12.0 131 5-146 12-178 (207)
99 1zzo_A RV1677; thioredoxin fol 99.9 5.8E-24 2E-28 143.6 10.6 129 6-160 1-131 (136)
100 1kng_A Thiol:disulfide interch 99.9 4.4E-24 1.5E-28 147.9 7.0 120 3-146 7-137 (156)
101 1i5g_A Tryparedoxin II; electr 99.9 1.7E-23 5.8E-28 143.6 6.0 121 5-145 2-128 (144)
102 2h30_A Thioredoxin, peptide me 99.9 6.8E-24 2.3E-28 148.2 3.9 129 7-161 17-153 (164)
103 1o8x_A Tryparedoxin, TRYX, TXN 99.9 4.4E-23 1.5E-27 141.9 5.9 121 5-146 3-129 (146)
104 1o73_A Tryparedoxin; electron 99.9 1.2E-22 4.2E-27 139.1 4.9 120 5-145 3-128 (144)
105 3s9f_A Tryparedoxin; thioredox 99.9 1.6E-23 5.6E-28 147.5 0.2 122 3-145 21-148 (165)
106 2lus_A Thioredoxion; CR-Trp16, 99.8 5.8E-23 2E-27 140.3 0.0 117 8-145 2-127 (143)
107 2l57_A Uncharacterized protein 99.5 3.5E-15 1.2E-19 99.8 3.3 109 8-160 4-113 (126)
108 2fwh_A Thiol:disulfide interch 99.5 4.4E-16 1.5E-20 105.6 -1.4 115 4-161 4-125 (134)
109 2ju5_A Thioredoxin disulfide i 99.5 3.5E-15 1.2E-19 103.6 -0.1 108 5-147 25-136 (154)
110 3ul3_B Thioredoxin, thioredoxi 99.4 9.4E-14 3.2E-18 93.2 5.3 108 6-161 20-127 (128)
111 3hxs_A Thioredoxin, TRXP; elec 99.4 8.4E-13 2.9E-17 89.6 6.6 98 21-161 38-136 (141)
112 2voc_A Thioredoxin; electron t 99.4 4.3E-12 1.5E-16 83.0 8.8 87 34-161 16-102 (112)
113 3fk8_A Disulphide isomerase; A 99.4 5.3E-13 1.8E-17 89.8 4.4 96 34-161 28-130 (133)
114 3p2a_A Thioredoxin 2, putative 99.3 1.8E-12 6.2E-17 88.9 5.2 109 6-160 31-139 (148)
115 3die_A Thioredoxin, TRX; elect 99.3 6.4E-12 2.2E-16 80.8 6.5 88 33-161 17-104 (106)
116 3qfa_C Thioredoxin; protein-pr 99.3 2.2E-12 7.6E-17 85.1 4.0 85 34-161 30-114 (116)
117 2kuc_A Putative disulphide-iso 99.3 2.7E-12 9.1E-17 85.9 3.8 97 24-160 17-117 (130)
118 1nsw_A Thioredoxin, TRX; therm 99.3 9.4E-12 3.2E-16 80.0 6.1 87 34-161 16-102 (105)
119 1t00_A Thioredoxin, TRX; redox 99.3 7.3E-12 2.5E-16 81.5 5.5 86 34-160 22-107 (112)
120 3d6i_A Monothiol glutaredoxin- 99.3 9E-12 3.1E-16 81.2 5.9 86 34-160 20-105 (112)
121 1dby_A Chloroplast thioredoxin 99.2 8.3E-12 2.8E-16 80.5 5.4 87 34-161 18-104 (107)
122 2vlu_A Thioredoxin, thioredoxi 99.2 4E-12 1.4E-16 84.1 3.7 110 4-160 6-116 (122)
123 2pu9_C TRX-F, thioredoxin F-ty 99.2 8.1E-12 2.8E-16 81.3 4.8 86 34-161 23-108 (111)
124 3f3q_A Thioredoxin-1; His TAG, 99.2 7.9E-12 2.7E-16 81.4 4.7 85 34-161 23-107 (109)
125 1xfl_A Thioredoxin H1; AT3G510 99.2 9.2E-12 3.1E-16 83.1 4.9 85 34-161 37-121 (124)
126 2j23_A Thioredoxin; immune pro 99.2 9.3E-12 3.2E-16 82.6 4.9 87 34-161 32-118 (121)
127 2oe3_A Thioredoxin-3; electron 99.2 2.4E-11 8.4E-16 79.9 6.7 86 34-162 29-114 (114)
128 2o8v_B Thioredoxin 1; disulfid 99.2 6.9E-12 2.4E-16 84.2 4.1 87 34-161 39-125 (128)
129 3d22_A TRXH4, thioredoxin H-ty 99.2 4E-12 1.4E-16 86.1 2.8 84 34-160 45-128 (139)
130 1ep7_A Thioredoxin CH1, H-type 99.2 1.2E-11 4.3E-16 80.3 5.1 85 35-161 24-108 (112)
131 1thx_A Thioredoxin, thioredoxi 99.2 3.2E-11 1.1E-15 78.5 7.0 86 34-160 24-109 (115)
132 1w4v_A Thioredoxin, mitochondr 99.2 1.9E-11 6.5E-16 80.8 5.7 87 34-161 30-116 (119)
133 2i4a_A Thioredoxin; acidophIle 99.2 3.4E-11 1.2E-15 77.4 6.8 87 34-161 19-105 (107)
134 1faa_A Thioredoxin F; electron 99.2 1.8E-11 6E-16 81.2 5.4 85 34-160 36-120 (124)
135 3zzx_A Thioredoxin; oxidoreduc 99.2 2.2E-11 7.5E-16 79.3 5.6 88 29-160 15-102 (105)
136 1fb6_A Thioredoxin M; electron 99.2 1.8E-11 6E-16 78.5 5.0 87 34-161 17-103 (105)
137 1xwb_A Thioredoxin; dimerizati 99.2 3.9E-11 1.3E-15 77.0 6.4 90 29-161 15-104 (106)
138 4euy_A Uncharacterized protein 99.2 1.6E-11 5.6E-16 79.2 4.6 86 34-161 17-102 (105)
139 3qou_A Protein YBBN; thioredox 99.2 7.9E-11 2.7E-15 88.9 9.1 77 34-148 25-101 (287)
140 2trx_A Thioredoxin; electron t 99.2 3E-11 1E-15 78.0 5.4 87 34-161 19-105 (108)
141 2vim_A Thioredoxin, TRX; thior 99.2 3.3E-11 1.1E-15 77.1 5.4 85 34-161 18-102 (104)
142 1x5d_A Protein disulfide-isome 99.2 4.8E-11 1.6E-15 79.8 6.3 87 34-160 24-113 (133)
143 2e0q_A Thioredoxin; electron t 99.2 3.5E-11 1.2E-15 76.7 5.3 85 34-160 15-99 (104)
144 2xc2_A Thioredoxinn; oxidoredu 99.2 2.4E-11 8.3E-16 79.8 4.6 88 29-161 28-115 (117)
145 3tco_A Thioredoxin (TRXA-1); d 99.2 4.2E-11 1.5E-15 77.1 5.7 86 34-160 20-105 (109)
146 3f9u_A Putative exported cytoc 99.2 4.8E-12 1.7E-16 88.8 1.1 106 26-147 39-151 (172)
147 3m9j_A Thioredoxin; oxidoreduc 99.2 3.9E-11 1.3E-15 77.0 5.3 89 29-161 15-103 (105)
148 1syr_A Thioredoxin; SGPP, stru 99.2 5.9E-11 2E-15 77.4 6.1 85 34-161 25-109 (112)
149 3gix_A Thioredoxin-like protei 99.1 1.4E-11 4.7E-16 85.0 2.9 74 34-145 22-95 (149)
150 2ppt_A Thioredoxin-2; thiredox 99.1 7.1E-11 2.4E-15 81.9 6.4 86 34-160 63-148 (155)
151 2l5l_A Thioredoxin; structural 99.1 3.4E-11 1.2E-15 81.4 4.6 85 34-160 37-122 (136)
152 2yzu_A Thioredoxin; redox prot 99.1 8.3E-11 2.8E-15 75.6 6.2 87 34-161 17-103 (109)
153 2i1u_A Thioredoxin, TRX, MPT46 99.1 9.8E-11 3.4E-15 77.0 6.2 87 34-161 29-115 (121)
154 1r26_A Thioredoxin; redox-acti 99.1 9.2E-11 3.1E-15 78.4 6.1 85 34-161 36-120 (125)
155 3emx_A Thioredoxin; structural 99.1 2.1E-11 7E-16 82.5 2.9 93 33-160 30-122 (135)
156 1ti3_A Thioredoxin H, PTTRXH1; 99.1 5.4E-11 1.9E-15 77.3 4.8 85 34-161 25-109 (113)
157 1x5e_A Thioredoxin domain cont 99.1 8.7E-11 3E-15 78.1 5.8 89 31-161 19-107 (126)
158 3gnj_A Thioredoxin domain prot 99.1 8.8E-11 3E-15 76.0 5.5 86 34-160 21-106 (111)
159 2dj1_A Protein disulfide-isome 99.1 7.1E-11 2.4E-15 79.8 5.2 86 34-160 33-120 (140)
160 2f51_A Thioredoxin; electron t 99.1 6.2E-11 2.1E-15 78.3 4.8 95 23-160 9-109 (118)
161 3cxg_A Putative thioredoxin; m 99.1 2.7E-11 9.1E-16 81.9 2.9 88 28-160 34-125 (133)
162 2l6c_A Thioredoxin; oxidoreduc 99.1 1E-10 3.6E-15 76.2 5.7 90 30-161 14-103 (110)
163 1gh2_A Thioredoxin-like protei 99.1 1.1E-10 3.6E-15 75.5 5.5 85 34-161 20-104 (107)
164 3dxb_A Thioredoxin N-terminall 99.1 5.3E-11 1.8E-15 87.1 4.2 86 34-160 29-114 (222)
165 2vm1_A Thioredoxin, thioredoxi 99.1 1.1E-10 3.6E-15 76.5 5.2 84 34-160 27-110 (118)
166 2wz9_A Glutaredoxin-3; protein 99.1 1E-10 3.5E-15 80.7 5.3 74 34-146 31-104 (153)
167 3hz4_A Thioredoxin; NYSGXRC, P 99.1 1.2E-10 4E-15 79.2 5.4 86 34-160 23-108 (140)
168 2dj0_A Thioredoxin-related tra 99.1 3E-10 1E-14 76.7 7.2 82 34-146 25-106 (137)
169 2lst_A Thioredoxin; structural 98.7 1.2E-11 4E-16 82.8 0.0 97 24-160 9-112 (130)
170 1zma_A Bacterocin transport ac 99.1 1.5E-10 5.2E-15 76.1 5.4 90 34-160 28-117 (118)
171 2dml_A Protein disulfide-isome 99.1 3.3E-10 1.1E-14 75.5 6.8 74 34-145 34-108 (130)
172 2yj7_A LPBCA thioredoxin; oxid 98.6 1.6E-11 5.3E-16 78.6 0.0 87 34-161 18-104 (106)
173 1oaz_A Thioredoxin 1; immune s 99.1 4.7E-10 1.6E-14 74.7 7.1 87 34-161 20-120 (123)
174 1mek_A Protein disulfide isome 99.0 1.4E-10 4.7E-15 75.9 4.3 88 34-161 23-114 (120)
175 3uvt_A Thioredoxin domain-cont 99.0 8.3E-11 2.8E-15 76.1 2.9 87 34-160 20-108 (111)
176 2dj3_A Protein disulfide-isome 99.0 4.9E-11 1.7E-15 79.9 0.9 43 34-79 24-67 (133)
177 3apq_A DNAJ homolog subfamily 99.0 5.4E-11 1.9E-15 86.2 0.9 97 22-160 102-198 (210)
178 1qgv_A Spliceosomal protein U5 99.0 2.4E-10 8.1E-15 78.1 3.7 74 34-145 22-95 (142)
179 1z6n_A Hypothetical protein PA 99.0 3E-10 1E-14 79.9 4.2 47 28-80 48-94 (167)
180 1v98_A Thioredoxin; oxidoreduc 99.0 7.2E-10 2.5E-14 75.0 5.5 85 35-160 50-134 (140)
181 1wmj_A Thioredoxin H-type; str 99.0 1E-10 3.6E-15 77.9 1.2 85 34-161 35-119 (130)
182 1nho_A Probable thioredoxin; b 98.9 1.2E-09 4.1E-14 67.2 5.5 78 38-160 4-81 (85)
183 1fo5_A Thioredoxin; disulfide 98.9 1.2E-09 4.1E-14 67.3 5.2 80 37-161 4-83 (85)
184 3h79_A Thioredoxin-like protei 98.9 4.8E-10 1.7E-14 74.7 3.3 69 34-139 32-105 (127)
185 3idv_A Protein disulfide-isome 98.9 1.8E-09 6.1E-14 79.1 6.3 71 34-141 31-103 (241)
186 1sen_A Thioredoxin-like protei 98.9 3.3E-11 1.1E-15 84.4 -3.9 86 25-146 37-123 (164)
187 3aps_A DNAJ homolog subfamily 98.9 1.1E-09 3.7E-14 72.2 3.1 67 34-138 20-87 (122)
188 2djj_A PDI, protein disulfide- 98.9 7.6E-10 2.6E-14 72.8 2.1 44 34-80 24-71 (121)
189 1a8l_A Protein disulfide oxido 98.8 6E-09 2.1E-13 75.8 6.9 86 35-160 133-222 (226)
190 2qgv_A Hydrogenase-1 operon pr 98.8 1.8E-09 6.3E-14 73.5 3.8 87 34-160 33-121 (140)
191 1a0r_P Phosducin, MEKA, PP33; 98.8 2.9E-09 9.8E-14 79.2 3.6 88 34-161 132-223 (245)
192 2es7_A Q8ZP25_salty, putative 98.8 2.1E-09 7.2E-14 73.5 2.6 83 36-160 35-121 (142)
193 1wou_A Thioredoxin -related pr 98.8 6E-09 2.1E-13 69.1 4.1 72 34-136 23-101 (123)
194 2av4_A Thioredoxin-like protei 98.8 5.5E-09 1.9E-13 72.4 3.8 72 34-143 40-111 (160)
195 2qsi_A Putative hydrogenase ex 98.7 6.6E-09 2.2E-13 70.5 4.1 84 36-160 34-119 (137)
196 3idv_A Protein disulfide-isome 98.7 5.9E-08 2E-12 70.9 8.9 71 34-141 146-218 (241)
197 2dbc_A PDCL2, unnamed protein 98.7 2.8E-09 9.7E-14 72.0 1.3 70 35-146 30-99 (135)
198 3t58_A Sulfhydryl oxidase 1; o 98.7 5.8E-09 2E-13 85.3 3.3 77 34-145 29-111 (519)
199 3ed3_A Protein disulfide-isome 98.7 1.6E-08 5.6E-13 77.1 5.4 71 34-140 34-104 (298)
200 1ilo_A Conserved hypothetical 98.6 7.5E-08 2.6E-12 58.0 6.3 61 39-142 3-63 (77)
201 3kp8_A Vkorc1/thioredoxin doma 98.6 8.1E-10 2.8E-14 71.9 -3.0 74 25-139 3-76 (106)
202 3q6o_A Sulfhydryl oxidase 1; p 98.6 3.7E-08 1.3E-12 72.7 5.2 68 34-136 29-98 (244)
203 2hls_A Protein disulfide oxido 98.6 1.1E-07 3.9E-12 70.3 7.9 68 34-140 137-207 (243)
204 1sji_A Calsequestrin 2, calseq 98.6 1.8E-07 6.2E-12 72.6 9.4 68 34-139 27-101 (350)
205 3ph9_A Anterior gradient prote 98.6 2.8E-09 9.5E-14 73.7 -0.9 92 34-161 43-139 (151)
206 2trc_P Phosducin, MEKA, PP33; 98.6 1.5E-08 5.2E-13 74.0 2.4 87 35-161 120-210 (217)
207 3ira_A Conserved protein; meth 98.6 1.1E-07 3.7E-12 67.1 6.3 105 25-161 30-141 (173)
208 3evi_A Phosducin-like protein 98.6 4.2E-08 1.4E-12 65.0 3.8 85 35-161 23-111 (118)
209 3iv4_A Putative oxidoreductase 98.5 1.2E-07 4.2E-12 61.9 5.5 77 35-146 24-100 (112)
210 2r2j_A Thioredoxin domain-cont 98.5 9.6E-08 3.3E-12 75.0 5.5 72 34-142 21-97 (382)
211 2b5e_A Protein disulfide-isome 98.5 7.1E-08 2.4E-12 78.2 4.3 75 34-145 30-106 (504)
212 1eej_A Thiol:disulfide interch 98.5 4.9E-08 1.7E-12 71.0 2.0 86 34-138 85-191 (216)
213 3f8u_A Protein disulfide-isome 98.4 2.3E-07 8E-12 74.7 5.0 73 36-146 22-94 (481)
214 3gyk_A 27KDA outer membrane pr 98.4 1.2E-07 4E-12 66.3 1.9 49 23-77 11-59 (175)
215 3apo_A DNAJ homolog subfamily 98.3 3E-07 1E-11 78.2 4.6 76 29-144 450-525 (780)
216 3f8u_A Protein disulfide-isome 98.3 9.7E-08 3.3E-12 76.9 1.2 44 34-80 369-413 (481)
217 2ywm_A Glutaredoxin-like prote 98.3 5E-07 1.7E-11 65.7 4.1 69 35-145 135-204 (229)
218 3apo_A DNAJ homolog subfamily 98.3 2.1E-07 7.3E-12 79.2 1.7 74 34-145 674-747 (780)
219 2znm_A Thiol:disulfide interch 98.2 2.4E-06 8.2E-11 60.6 5.1 42 34-79 21-62 (195)
220 3hd5_A Thiol:disulfide interch 98.1 8.4E-07 2.9E-11 63.1 2.2 43 34-80 24-66 (195)
221 3h93_A Thiol:disulfide interch 98.1 3.5E-07 1.2E-11 65.0 0.1 41 34-78 24-64 (192)
222 3qcp_A QSOX from trypanosoma b 98.1 1.4E-06 4.8E-11 70.2 3.2 64 35-135 42-112 (470)
223 3uem_A Protein disulfide-isome 98.1 7.1E-07 2.4E-11 69.3 1.4 43 34-79 266-309 (361)
224 3dml_A Putative uncharacterize 98.1 3.4E-07 1.2E-11 60.3 -0.4 81 34-149 17-98 (116)
225 3us3_A Calsequestrin-1; calciu 98.0 1.3E-05 4.4E-10 62.7 6.8 69 35-140 30-104 (367)
226 2b5e_A Protein disulfide-isome 98.0 8.4E-07 2.9E-11 71.9 0.0 43 34-79 375-419 (504)
227 2e7p_A Glutaredoxin; thioredox 97.9 1.7E-06 5.8E-11 56.2 0.8 91 31-161 15-105 (116)
228 2dlx_A UBX domain-containing p 97.9 3.8E-05 1.3E-09 52.9 7.4 73 34-143 41-119 (153)
229 1t3b_A Thiol:disulfide interch 97.8 2.7E-06 9.4E-11 61.5 0.6 36 35-77 86-121 (211)
230 3ga4_A Dolichyl-diphosphooligo 97.8 2.9E-05 9.9E-10 54.8 5.6 32 35-67 37-74 (178)
231 1a8l_A Protein disulfide oxido 97.8 3.7E-05 1.3E-09 55.5 5.4 67 36-138 22-89 (226)
232 1z6m_A Conserved hypothetical 97.7 3.7E-05 1.3E-09 53.5 5.0 51 25-79 18-69 (175)
233 1v58_A Thiol:disulfide interch 97.7 2.2E-05 7.4E-10 57.9 4.0 39 34-78 96-134 (241)
234 2ywm_A Glutaredoxin-like prote 97.6 4.6E-05 1.6E-09 55.2 4.3 76 35-146 20-100 (229)
235 2rem_A Disulfide oxidoreductas 97.5 3.9E-05 1.3E-09 54.1 2.2 40 35-78 25-64 (193)
236 2k8s_A Thioredoxin; dimer, str 97.5 8.4E-05 2.9E-09 45.0 3.1 64 39-142 4-68 (80)
237 1hyu_A AHPF, alkyl hydroperoxi 97.4 0.00034 1.2E-08 57.0 6.6 67 36-142 117-183 (521)
238 2djk_A PDI, protein disulfide- 97.2 9.5E-05 3.3E-09 49.2 1.6 42 34-80 22-63 (133)
239 2fgx_A Putative thioredoxin; N 97.1 0.00078 2.7E-08 43.5 5.0 37 38-80 31-67 (107)
240 1wjk_A C330018D20RIK protein; 97.0 0.0001 3.4E-09 46.9 0.2 49 24-80 4-52 (100)
241 1ttz_A Conserved hypothetical 97.0 6.8E-05 2.3E-09 46.6 -0.8 22 39-62 3-24 (87)
242 1h75_A Glutaredoxin-like prote 96.7 0.0011 3.7E-08 39.7 2.7 30 43-81 6-35 (81)
243 1ego_A Glutaredoxin; electron 96.6 0.00056 1.9E-08 41.4 1.1 37 39-80 3-39 (85)
244 3uem_A Protein disulfide-isome 96.6 0.0021 7.2E-08 49.5 4.6 40 37-80 137-176 (361)
245 1r7h_A NRDH-redoxin; thioredox 96.6 0.0014 4.9E-08 38.5 2.7 30 43-81 6-35 (75)
246 3kp9_A Vkorc1/thioredoxin doma 96.4 0.00033 1.1E-08 53.1 -1.2 37 25-64 188-224 (291)
247 3gv1_A Disulfide interchange p 96.2 0.0012 4E-08 45.0 0.7 27 34-62 13-39 (147)
248 2hls_A Protein disulfide oxido 95.8 0.011 3.8E-07 43.3 4.6 30 35-66 25-56 (243)
249 2klx_A Glutaredoxin; thioredox 95.8 0.015 5.2E-07 35.3 4.5 40 43-92 11-50 (89)
250 2c0g_A ERP29 homolog, windbeut 95.6 0.02 6.7E-07 42.3 5.3 42 34-81 32-76 (248)
251 2lqo_A Putative glutaredoxin R 95.6 0.0082 2.8E-07 37.4 2.7 39 43-90 9-48 (92)
252 3hz8_A Thiol:disulfide interch 95.5 0.0028 9.7E-08 44.8 0.4 42 34-79 23-64 (193)
253 2qc7_A ERP31, ERP28, endoplasm 95.4 0.0087 3E-07 44.0 2.9 40 34-80 21-63 (240)
254 1un2_A DSBA, thiol-disulfide i 95.2 0.0014 4.7E-08 46.8 -2.0 43 34-80 112-157 (197)
255 2yan_A Glutaredoxin-3; oxidore 94.7 0.02 7E-07 36.1 2.7 41 31-80 12-55 (105)
256 1wik_A Thioredoxin-like protei 94.4 0.033 1.1E-06 35.4 3.2 61 30-101 9-74 (109)
257 1kte_A Thioltransferase; redox 94.3 0.0032 1.1E-07 39.6 -1.7 30 30-62 6-35 (105)
258 1fov_A Glutaredoxin 3, GRX3; a 94.2 0.022 7.4E-07 33.8 2.0 29 43-80 6-34 (82)
259 3feu_A Putative lipoprotein; a 94.1 0.014 4.7E-07 40.9 1.0 30 35-66 22-51 (185)
260 2ct6_A SH3 domain-binding glut 94.0 0.15 5.3E-06 32.4 5.8 45 44-91 14-59 (111)
261 2khp_A Glutaredoxin; thioredox 93.8 0.043 1.5E-06 33.4 2.8 30 43-81 11-40 (92)
262 3q6o_A Sulfhydryl oxidase 1; p 93.6 0.13 4.4E-06 37.2 5.5 52 97-162 186-238 (244)
263 3ic4_A Glutaredoxin (GRX-1); s 93.5 0.026 9E-07 34.4 1.4 18 43-61 17-34 (92)
264 3qmx_A Glutaredoxin A, glutare 93.4 0.032 1.1E-06 35.0 1.7 28 45-81 23-50 (99)
265 2cq9_A GLRX2 protein, glutared 93.0 0.058 2E-06 35.5 2.6 35 35-80 26-60 (130)
266 3l9v_A Putative thiol-disulfid 93.0 0.011 3.7E-07 41.6 -1.1 42 34-79 13-57 (189)
267 3rhb_A ATGRXC5, glutaredoxin-C 92.7 0.046 1.6E-06 34.8 1.7 24 35-61 18-41 (113)
268 3c1r_A Glutaredoxin-1; oxidize 92.6 0.057 1.9E-06 34.9 2.1 33 39-80 27-62 (118)
269 2hze_A Glutaredoxin-1; thiored 92.6 0.036 1.2E-06 35.5 1.0 20 38-59 20-39 (114)
270 2ec4_A FAS-associated factor 1 92.3 0.43 1.5E-05 33.2 6.4 90 34-146 54-153 (178)
271 2ht9_A Glutaredoxin-2; thiored 91.8 0.069 2.4E-06 36.0 1.7 24 35-61 48-71 (146)
272 3h8q_A Thioredoxin reductase 3 91.4 0.09 3.1E-06 33.6 1.9 36 34-80 15-50 (114)
273 3l78_A Regulatory protein SPX; 91.4 0.11 3.7E-06 33.8 2.3 65 40-115 2-70 (120)
274 3msz_A Glutaredoxin 1; alpha-b 91.0 0.24 8.1E-06 29.5 3.5 19 40-59 6-24 (89)
275 1aba_A Glutaredoxin; electron 90.8 0.2 6.9E-06 30.1 3.0 44 42-94 4-57 (87)
276 3nzn_A Glutaredoxin; structura 90.1 0.048 1.6E-06 34.2 -0.3 21 39-61 24-44 (103)
277 1t1v_A SH3BGRL3, SH3 domain-bi 89.9 0.53 1.8E-05 28.6 4.5 47 44-93 8-55 (93)
278 1u6t_A SH3 domain-binding glut 89.7 1.9 6.5E-05 28.0 7.1 50 40-92 2-52 (121)
279 3fz4_A Putative arsenate reduc 89.5 0.17 5.9E-06 32.9 2.1 65 40-115 5-73 (120)
280 2jvx_A NF-kappa-B essential mo 89.2 0.16 5.5E-06 24.3 1.3 21 47-68 5-25 (28)
281 3zyw_A Glutaredoxin-3; metal b 89.2 0.11 3.6E-06 33.3 0.8 62 29-100 9-74 (111)
282 3ihg_A RDME; flavoenzyme, anth 89.1 4.2 0.00014 32.7 10.4 110 4-160 420-530 (535)
283 2dkh_A 3-hydroxybenzoate hydro 89.1 1.5 5.3E-05 36.3 7.9 125 4-144 467-622 (639)
284 3ctg_A Glutaredoxin-2; reduced 89.0 0.21 7.1E-06 32.8 2.1 10 44-53 43-52 (129)
285 1z3e_A Regulatory protein SPX; 88.7 0.24 8.3E-06 32.6 2.4 64 41-115 4-71 (132)
286 3l9s_A Thiol:disulfide interch 88.1 0.1 3.5E-06 36.6 0.2 47 28-78 14-63 (191)
287 3gkx_A Putative ARSC family re 87.6 0.14 4.9E-06 33.3 0.6 65 40-115 6-74 (120)
288 3fhk_A UPF0403 protein YPHP; d 87.4 4.2 0.00014 27.1 7.6 57 98-161 82-138 (147)
289 3ipz_A Monothiol glutaredoxin- 86.9 0.18 6.2E-06 32.0 0.8 41 30-80 12-56 (109)
290 2wci_A Glutaredoxin-4; redox-a 86.0 0.27 9.2E-06 32.7 1.3 55 35-100 34-93 (135)
291 3gx8_A Monothiol glutaredoxin- 85.9 0.32 1.1E-05 31.6 1.6 23 31-54 11-37 (121)
292 1s3c_A Arsenate reductase; ARS 83.7 0.2 6.9E-06 33.6 -0.1 65 41-116 5-73 (141)
293 3ghf_A Septum site-determining 83.6 4.1 0.00014 26.3 6.2 55 31-94 43-97 (120)
294 4f9z_D Endoplasmic reticulum r 83.1 1.8 6.3E-05 30.7 4.8 43 35-80 130-172 (227)
295 4dvc_A Thiol:disulfide interch 83.0 0.21 7.1E-06 34.1 -0.3 40 34-77 20-59 (184)
296 3f0i_A Arsenate reductase; str 82.1 0.27 9.1E-06 31.9 -0.0 66 40-116 6-76 (119)
297 2wem_A Glutaredoxin-related pr 81.2 0.65 2.2E-05 30.0 1.6 26 28-54 12-41 (118)
298 3tdg_A DSBG, putative uncharac 80.6 0.59 2E-05 34.9 1.4 38 35-78 147-184 (273)
299 1rw1_A Conserved hypothetical 79.8 1.2 3.9E-05 28.4 2.4 61 41-114 3-67 (114)
300 3c7m_A Thiol:disulfide interch 79.5 0.71 2.4E-05 31.7 1.5 41 35-79 17-58 (195)
301 3mjh_B Early endosome antigen 79.5 0.69 2.4E-05 23.1 1.0 20 48-68 8-27 (34)
302 2axo_A Hypothetical protein AT 79.4 5.4 0.00018 29.6 6.2 52 38-94 44-110 (270)
303 2kok_A Arsenate reductase; bru 74.3 2.2 7.7E-05 27.3 2.7 61 41-114 8-72 (120)
304 3t58_A Sulfhydryl oxidase 1; o 73.7 2.3 7.9E-05 34.5 3.2 38 97-145 186-224 (519)
305 3l4n_A Monothiol glutaredoxin- 73.5 0.58 2E-05 30.7 -0.4 63 31-101 9-74 (127)
306 1nm3_A Protein HI0572; hybrid, 70.1 1.9 6.4E-05 30.9 1.7 8 46-53 178-185 (241)
307 3ga8_A HTH-type transcriptiona 69.7 2.6 9E-05 24.9 2.0 34 34-67 25-63 (78)
308 3gn3_A Putative protein-disulf 69.3 1.2 4.2E-05 30.8 0.5 38 37-76 15-52 (182)
309 1pn0_A Phenol 2-monooxygenase; 67.8 7.2 0.00025 32.5 5.0 122 4-144 479-630 (665)
310 3ktb_A Arsenical resistance op 64.4 7.2 0.00024 24.7 3.3 39 39-79 7-51 (106)
311 3rdw_A Putative arsenate reduc 63.9 3.1 0.00011 26.8 1.6 66 40-115 7-76 (121)
312 3o9x_A Uncharacterized HTH-typ 63.6 17 0.00057 23.2 5.3 66 34-115 25-97 (133)
313 3kzq_A Putative uncharacterize 62.5 5.2 0.00018 27.8 2.7 35 40-77 5-39 (208)
314 3fmw_A Oxygenase; mithramycin, 61.2 4.6 0.00016 33.1 2.5 35 4-42 445-480 (570)
315 3bci_A Disulfide bond protein 61.2 3.3 0.00011 28.2 1.5 40 35-77 11-52 (186)
316 2in3_A Hypothetical protein; D 53.5 9.1 0.00031 26.5 2.7 36 39-77 9-44 (216)
317 3gha_A Disulfide bond formatio 52.6 3.3 0.00011 29.0 0.3 42 34-78 28-71 (202)
318 2wm8_A MDP-1, magnesium-depend 52.2 49 0.0017 22.0 7.7 59 56-115 70-136 (187)
319 3vhs_A ATPase wrnip1; zinc fin 52.1 3 0.0001 19.2 -0.0 11 47-58 8-18 (29)
320 1xhj_A Nitrogen fixation prote 51.4 18 0.0006 22.0 3.4 35 22-60 25-59 (88)
321 2qa2_A CABE, polyketide oxygen 51.0 17 0.00058 29.0 4.3 34 4-42 395-429 (499)
322 2qa1_A PGAE, polyketide oxygen 46.9 17 0.00058 29.0 3.6 34 4-42 394-428 (500)
323 2in3_A Hypothetical protein; D 46.0 11 0.00036 26.1 2.1 19 124-145 176-194 (216)
324 3ib6_A Uncharacterized protein 45.7 64 0.0022 21.5 6.2 44 56-100 36-82 (189)
325 3fvv_A Uncharacterized protein 45.0 59 0.002 22.1 6.0 38 56-94 94-131 (232)
326 3gmf_A Protein-disulfide isome 44.3 7.1 0.00024 27.4 0.9 46 27-76 8-55 (205)
327 1o22_A Orphan protein TM0875; 43.1 9.7 0.00033 24.8 1.3 30 3-32 65-94 (170)
328 2z1d_A Hydrogenase expression/ 43.1 67 0.0023 24.9 6.2 27 40-67 58-84 (372)
329 2obb_A Hypothetical protein; s 41.5 39 0.0013 22.3 4.2 45 56-103 26-73 (142)
330 3e58_A Putative beta-phosphogl 41.4 64 0.0022 21.1 5.6 39 56-95 91-129 (214)
331 2fpr_A Histidine biosynthesis 39.9 63 0.0022 21.4 5.3 43 56-101 44-101 (176)
332 1nnl_A L-3-phosphoserine phosp 39.7 43 0.0015 22.7 4.5 38 56-94 88-125 (225)
333 3f4s_A Alpha-DSBA1, putative u 39.6 8.1 0.00028 27.6 0.6 41 34-77 38-80 (226)
334 2p9j_A Hypothetical protein AQ 38.8 76 0.0026 20.3 5.8 35 59-94 41-75 (162)
335 3ir9_A Peptide chain release f 38.6 48 0.0016 22.5 4.4 44 47-93 105-154 (166)
336 3j21_Z 50S ribosomal protein L 37.8 67 0.0023 19.4 5.7 54 59-115 20-77 (99)
337 3brc_A Conserved protein of un 37.5 58 0.002 21.7 4.4 30 130-159 111-141 (156)
338 4gxt_A A conserved functionall 37.1 45 0.0015 25.8 4.6 38 56-94 223-260 (385)
339 1l6r_A Hypothetical protein TA 36.9 65 0.0022 22.4 5.1 37 57-94 25-61 (227)
340 4e6z_A Apicoplast TIC22, putat 36.5 42 0.0014 24.9 4.1 63 8-85 75-141 (279)
341 2pib_A Phosphorylated carbohyd 36.0 72 0.0025 20.9 5.1 39 56-95 86-124 (216)
342 3kgk_A Arsenical resistance op 35.1 47 0.0016 21.0 3.6 39 39-79 4-48 (110)
343 4ev1_A Anabena TIC22; TIC22 fo 35.0 1.3E+02 0.0045 21.9 6.6 83 8-105 12-111 (252)
344 3m9l_A Hydrolase, haloacid deh 34.6 78 0.0027 21.0 5.1 38 57-95 73-110 (205)
345 4as2_A Phosphorylcholine phosp 34.6 51 0.0017 24.9 4.4 38 53-92 143-180 (327)
346 1sji_A Calsequestrin 2, calseq 34.1 25 0.00085 26.4 2.6 23 45-68 254-276 (350)
347 4hoj_A REGF protein; GST, glut 33.9 6.3 0.00022 27.1 -0.7 56 40-105 4-59 (210)
348 2ftc_P Mitochondrial ribosomal 33.5 12 0.00042 20.3 0.6 8 47-55 38-45 (52)
349 1w41_A 50S ribosomal protein L 32.7 84 0.0029 19.0 5.2 53 60-115 22-78 (101)
350 2no4_A (S)-2-haloacid dehaloge 32.5 1E+02 0.0035 20.9 5.6 37 57-94 108-144 (240)
351 2nyv_A Pgpase, PGP, phosphogly 32.0 89 0.003 21.1 5.1 38 56-94 85-122 (222)
352 1zrn_A L-2-haloacid dehalogena 31.1 1.1E+02 0.0039 20.5 5.6 37 57-94 98-134 (232)
353 3s6j_A Hydrolase, haloacid deh 30.8 81 0.0028 21.1 4.8 39 56-95 93-131 (233)
354 2wul_A Glutaredoxin related pr 30.6 25 0.00086 22.4 1.8 25 29-53 13-40 (118)
355 2gmw_A D,D-heptose 1,7-bisphos 30.0 1.1E+02 0.0036 20.8 5.2 38 56-94 52-104 (211)
356 3kzx_A HAD-superfamily hydrola 29.9 77 0.0026 21.4 4.5 59 56-115 105-175 (231)
357 3um9_A Haloacid dehalogenase, 29.0 96 0.0033 20.7 4.9 38 56-94 98-135 (230)
358 3bbo_3 Ribosomal protein L33; 28.6 20 0.00067 20.6 0.9 8 47-55 51-58 (66)
359 3e20_C Eukaryotic peptide chai 28.6 47 0.0016 26.3 3.4 44 47-93 365-414 (441)
360 2hsz_A Novel predicted phospha 28.4 1.1E+02 0.0037 21.1 5.1 37 57-94 117-153 (243)
361 2lnd_A De novo designed protei 28.1 99 0.0034 18.4 6.4 28 57-85 64-91 (112)
362 3umb_A Dehalogenase-like hydro 27.8 1.1E+02 0.0038 20.5 5.0 39 56-95 101-139 (233)
363 2zjr_1 50S ribosomal protein L 27.2 18 0.00062 19.9 0.6 8 47-55 40-47 (55)
364 2pr7_A Haloacid dehalogenase/e 27.1 40 0.0014 20.7 2.4 37 56-93 20-56 (137)
365 1kcq_A Gelsolin, brevin, ADF, 26.3 25 0.00087 21.6 1.2 19 130-148 30-48 (104)
366 3sd7_A Putative phosphatase; s 25.9 99 0.0034 21.0 4.5 58 57-115 113-182 (240)
367 3vk8_A Probable formamidopyrim 25.6 17 0.00059 27.2 0.4 10 45-54 279-288 (295)
368 1vjq_A Designed protein; struc 25.6 58 0.002 18.6 2.7 28 75-104 43-70 (79)
369 3us3_A Calsequestrin-1; calciu 24.9 19 0.00063 27.5 0.5 30 38-69 250-279 (367)
370 3bby_A Uncharacterized GST-lik 24.7 25 0.00087 24.0 1.1 60 38-105 7-67 (215)
371 2gjf_A Designed protein; proca 24.7 84 0.0029 17.8 3.3 27 75-103 51-77 (78)
372 3kbb_A Phosphorylated carbohyd 23.9 1.5E+02 0.0052 19.6 5.1 39 56-95 86-124 (216)
373 3m1y_A Phosphoserine phosphata 23.9 61 0.0021 21.6 3.0 38 56-94 77-114 (217)
374 2r0c_A REBC; flavin adenine di 23.6 59 0.002 26.2 3.2 31 4-42 450-480 (549)
375 2jad_A Yellow fluorescent prot 23.1 12 0.00043 28.9 -0.8 18 35-54 260-277 (362)
376 2o2x_A Hypothetical protein; s 23.0 96 0.0033 21.1 3.9 38 56-94 58-110 (218)
377 3a1c_A Probable copper-exporti 22.8 1.1E+02 0.0039 21.9 4.4 59 56-115 165-224 (287)
378 2hoq_A Putative HAD-hydrolase 22.7 1.6E+02 0.0055 19.9 5.1 38 56-94 96-133 (241)
379 3kd3_A Phosphoserine phosphohy 22.5 96 0.0033 20.3 3.8 37 57-94 85-121 (219)
380 2r47_A Uncharacterized protein 22.2 1.9E+02 0.0064 19.5 5.4 57 36-94 84-140 (157)
381 1k1e_A Deoxy-D-mannose-octulos 21.8 1.8E+02 0.006 19.1 5.3 33 61-94 42-74 (180)
382 3mc1_A Predicted phosphatase, 21.8 1.1E+02 0.0038 20.3 4.1 59 56-115 88-158 (226)
383 4eek_A Beta-phosphoglucomutase 21.7 1.3E+02 0.0043 20.7 4.4 38 56-94 112-149 (259)
384 2j07_A Deoxyribodipyrimidine p 21.7 1.5E+02 0.0051 23.1 5.1 38 56-94 51-88 (420)
385 2jya_A AGR_C_3324P, uncharacte 21.3 92 0.0032 19.5 3.1 39 75-115 54-93 (106)
386 1t6c_A Exopolyphosphatase; alp 21.3 1.2E+02 0.0042 22.6 4.4 55 59-115 70-131 (315)
387 2x8g_A Thioredoxin glutathione 21.2 18 0.0006 29.5 -0.4 18 35-54 17-34 (598)
388 3nvb_A Uncharacterized protein 21.2 2.9E+02 0.01 21.4 8.3 36 56-92 258-293 (387)
389 4ex6_A ALNB; modified rossman 21.1 95 0.0033 20.9 3.6 37 57-94 107-143 (237)
390 3cpq_A 50S ribosomal protein L 20.6 1.6E+02 0.0054 18.1 4.8 53 60-115 27-83 (110)
391 3twl_A Formamidopyrimidine-DNA 20.6 25 0.00085 26.5 0.4 17 44-61 268-284 (310)
392 2lju_A Putative oxidoreductase 20.6 1.2E+02 0.0042 19.0 3.6 28 76-105 63-90 (108)
393 3ebl_A Gibberellin receptor GI 20.5 2E+02 0.007 21.4 5.6 42 35-79 111-153 (365)
394 3f6d_A Adgstd4-4, glutathione 20.4 24 0.00082 24.1 0.3 55 43-105 4-59 (219)
395 3cwf_A Alkaline phosphatase sy 20.3 65 0.0022 19.8 2.3 15 129-143 50-64 (122)
396 3op6_A Uncharacterized protein 20.2 1.9E+02 0.0064 18.8 6.5 32 82-115 4-39 (152)
No 1
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=100.00 E-value=1.2e-38 Score=223.90 Aligned_cols=148 Identities=23% Similarity=0.329 Sum_probs=120.6
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCH
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDP 82 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~ 82 (162)
++++|+++|+|+|+ +.+|++++|+++ +||++||+||+++|||+|+.| ++.|+++++++++.++ ++++||.|++
T Consensus 3 ~l~vG~~aPdF~l~----~~~G~~~~l~d~-~Gk~vvl~f~~~~~c~~C~~e-~~~l~~~~~~~~~~~~-~~v~vs~d~~ 75 (157)
T 4g2e_A 3 MVEIGELAPDFELP----DTELKKVKLSAL-KGKVVVLAFYPAAFTQVCTKE-MCTFRDSMAKFNQVNA-VVLGISVDPP 75 (157)
T ss_dssp CCCTTSBCCCCEEE----BTTSCEEEGGGG-TTSCEEEEECSCTTCCC-------CCSCGGGGGGGCSS-EEEEEESSCH
T ss_pred cCCCCCCCcCeEeE----CCCCCEEeHHHH-CCCeEEEEecCCCCCCccccc-hhhcccccccccccCc-eEeeecccch
Confidence 68999999999999 999999999998 999999999999999999998 9999999999999999 9999999999
Q ss_pred HHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHHHh
Q 038822 83 FVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
+.+++|.+++++ +||+++|++++++++||+............+.|++|||| +|+|+|.++++... ...+++++++
T Consensus 76 ~~~~~~~~~~~~--~~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~-~~~~~~eil~ 151 (157)
T 4g2e_A 76 FSNKAFKEHNKL--NFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPT-KEPPYDEIEK 151 (157)
T ss_dssp HHHHHHHHHTTC--CSEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEESSTT-CCCCHHHHHH
T ss_pred hHHHHHHHHcCC--cEEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEECCCCC-CCCCHHHHHH
Confidence 999999999999 999999999999999999764322111112357799999 99999999885221 2244555544
No 2
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=100.00 E-value=4.4e-39 Score=227.73 Aligned_cols=151 Identities=22% Similarity=0.379 Sum_probs=128.8
Q ss_pred CC-CCCCCCCCCCeeeeeeecCCCceeEehhhhc-CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEE
Q 038822 1 MA-PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLA-AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCIS 78 (162)
Q Consensus 1 m~-~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~-~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is 78 (162)
|. ++++|+++|+|+|+ +.+|++++|+++. +||++||+|||++|||+|+.| ++.|++++++|++.|+ ++++||
T Consensus 1 m~gml~vG~~aPdF~l~----~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e-~~~l~~~~~~~~~~~v-~vv~is 74 (164)
T 4gqc_A 1 MKGLVELGEKAPDFTLP----NQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKE-LCTFRDKMAQLEKANA-EVLAIS 74 (164)
T ss_dssp ---CCCTTSBCCCCEEE----BTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSS-CEESCCCGGGGGGSSS-EEEEEE
T ss_pred CCCcccCCCCCcCcEeE----CCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccc-hhhhhhhHHHhhccCc-eEEEec
Confidence 44 68999999999999 8999999999974 789999999999999999998 9999999999999999 999999
Q ss_pred cCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHH
Q 038822 79 VNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADD 157 (162)
Q Consensus 79 ~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~ 157 (162)
.|+++.+++|.+++++ +||+++|++++++++||+..+... +......|++|||| +|+|+|.+++.... ...++++
T Consensus 75 ~d~~~~~~~~~~~~~~--~fp~l~D~~~~v~~~ygv~~~~~~-~~~~~~~p~tflID~~G~I~~~~~~~~~~-~~~~~~e 150 (164)
T 4gqc_A 75 VDSPWCLKKFKDENRL--AFNLLSDYNREVIKLYNVYHEDLK-GLKMVAKRAVFIVKPDGTVAYKWVTDNPL-NEPDYDE 150 (164)
T ss_dssp SSCHHHHHHHHHHTTC--CSEEEECTTSHHHHHTTCEEEEET-TEEEEECCEEEEECTTSBEEEEEECSCTT-CCCCHHH
T ss_pred CCCHHHHHHHHHhcCc--ccceeecCchHHHHHcCCcccccc-cCcCCeeeEEEEECCCCEEEEEEEeCCCC-CCCCHHH
Confidence 9999999999999999 999999999999999999753211 11112346799999 99999999876321 3467788
Q ss_pred HHhc
Q 038822 158 ILKS 161 (162)
Q Consensus 158 il~~ 161 (162)
+|+.
T Consensus 151 il~~ 154 (164)
T 4gqc_A 151 VVRE 154 (164)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8765
No 3
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.8e-38 Score=228.53 Aligned_cols=154 Identities=45% Similarity=0.758 Sum_probs=137.5
Q ss_pred CCCCCCCCCCCCeeeeeeecCC--Cc-eeEehhhhcCCCeEEEEEeeCCCCCCCCc-CCHhHHHHhHHHHHhCCCCe-EE
Q 038822 1 MAPIAVGDPLPDGTLVYFDEQD--QL-QQVSVHSLAAGKKVILFGVPGDFTPTCSL-KHVPGFIEKADELQSKGVDE-IL 75 (162)
Q Consensus 1 m~~l~~G~~~P~f~l~~~~~~~--~g-~~~~l~~~~~gk~vvl~f~~~~~cp~C~~-~~~~~l~~~~~~~~~~~~~~-v~ 75 (162)
|.++++|+++|+|+++ +. +| ++++|+++++||++||+|||++|||+|+. | ++.|++++++|+++|+ + |+
T Consensus 23 ~~~l~vG~~aPdf~l~----~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e-~p~l~~~~~~~~~~gv-~~vv 96 (184)
T 3uma_A 23 MMTIAVGDKLPNATFK----EKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNH-LPGYLENRDAILARGV-DDIA 96 (184)
T ss_dssp SSCCCTTCBCCCCEEE----EEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTH-HHHHHHTHHHHHTTTC-CEEE
T ss_pred cCcCCCCCCCCCcEee----cccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHH-HHHHHHHHHHHHHcCC-CEEE
Confidence 4468999999999999 65 88 99999993399999999999999999999 8 9999999999999999 8 99
Q ss_pred EEEcCCHHHHHHHHHhCCCCCc--eEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEcCCeEEEEEeec-CCccee
Q 038822 76 CISVNDPFVMKAWAKTFPKNKS--VKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVDDLKVKAANVES-GGDFTV 152 (162)
Q Consensus 76 ~is~d~~~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~-~~~~~~ 152 (162)
+||.|+++.+++|.+++++ + ||+++|++++++++||+..+.+..+.+.++.|++|||+||+|+++++++ ++..+.
T Consensus 97 ~Is~d~~~~~~~f~~~~~~--~~~fp~l~D~~~~va~~yGv~~~~~~~g~g~~~~r~tfiIddG~I~~~~~~~~~g~~~~ 174 (184)
T 3uma_A 97 VVAVNDLHVMGAWATHSGG--MGKIHFLSDWNAAFTKAIGMEIDLSAGTLGIRSKRYSMLVEDGVVKALNIEESPGQATA 174 (184)
T ss_dssp EEESSCHHHHHHHHHHHTC--TTTSEEEECTTCHHHHHTTCEEEEGGGTCEEEECCEEEEEETTEEEEEEECSSTTCCST
T ss_pred EEECCCHHHHHHHHHHhCC--CCceEEEEcCchHHHHHcCCceeccccCCcccceeEEEEECCCEEEEEEEeCCCCCCcC
Confidence 9999999999999999998 7 9999999999999999986544344445556789999999999999997 566678
Q ss_pred CCHHHHHhcC
Q 038822 153 SSADDILKSL 162 (162)
Q Consensus 153 ~~~~~il~~l 162 (162)
+.++++|++|
T Consensus 175 ~~~~~vL~~L 184 (184)
T 3uma_A 175 SGAAAMLELL 184 (184)
T ss_dssp TSHHHHHHHC
T ss_pred CCHHHHHhhC
Confidence 9999999986
No 4
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=100.00 E-value=1.1e-35 Score=209.52 Aligned_cols=157 Identities=83% Similarity=1.281 Sum_probs=131.7
Q ss_pred CCCCCCCCCCCCeeeeeeecCCCc--eeEehhh-hcCCCeEEEEEeeCCCCCCCC-cCCHhHHHHhHHHHHhCCCCe-EE
Q 038822 1 MAPIAVGDPLPDGTLVYFDEQDQL--QQVSVHS-LAAGKKVILFGVPGDFTPTCS-LKHVPGFIEKADELQSKGVDE-IL 75 (162)
Q Consensus 1 m~~l~~G~~~P~f~l~~~~~~~~g--~~~~l~~-~~~gk~vvl~f~~~~~cp~C~-~~~~~~l~~~~~~~~~~~~~~-v~ 75 (162)
|-++++|+++|+|+++.. +.+| ++++|++ + +||++||+||+++|||+|+ .| ++.|++++++++++|+ + |+
T Consensus 1 mm~~~~G~~aP~f~l~~~--~~~G~~~~~~l~~~~-~gk~vvl~f~~~~~c~~C~~~e-~~~l~~~~~~~~~~~v-~~vv 75 (162)
T 1tp9_A 1 MAPIAVGDVLPDGKLAYF--DEQDQLQEVSVHSLV-AGKKVILFGVPGAFTPTCSLKH-VPGFIEKAGELKSKGV-TEIL 75 (162)
T ss_dssp CCCCCTTCBCCCCEEEEE--CTTSCEEEEESHHHH-TTSEEEEEEESCTTCHHHHHTH-HHHHHHHHHHHHHTTC-CCEE
T ss_pred CCcCCCCCCCCCeEEEee--cCCCCceeEeHHHHh-CCCcEEEEEeCCCCCCCCCHHH-HHHHHHHHHHHHHCCC-CEEE
Confidence 556999999999998532 6789 9999999 6 9999999999999999999 97 9999999999999999 9 99
Q ss_pred EEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCH
Q 038822 76 CISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSA 155 (162)
Q Consensus 76 ~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~ 155 (162)
+||.|+++.+++|.+++++..+|++++|++++++++||+..+....|.+..+.|++||+|+|+|++.+++++.....+.+
T Consensus 76 ~Is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~~~vid~G~i~~~~~~~~~~~~~~~~ 155 (162)
T 1tp9_A 76 CISVNDPFVMKAWAKSYPENKHVKFLADGSATYTHALGLELDLQEKGLGTRSRRFALLVDDLKVKAANIEGGGEFTVSSA 155 (162)
T ss_dssp EEESSCHHHHHHHHHTCTTCSSEEEEECTTSHHHHHTTCEEEETTTTSEEEECCEEEEEETTEEEEEEECSSSCCSSCSH
T ss_pred EEECCCHHHHHHHHHhcCCCCCeEEEECCCchHHHHcCcccccccCCCCccceeEEEEEECCEEEEEEeeCCCCCccCCH
Confidence 99999999999999999862259999999999999999985422223222234668888899999999887433334589
Q ss_pred HHHHhcC
Q 038822 156 DDILKSL 162 (162)
Q Consensus 156 ~~il~~l 162 (162)
+++|++|
T Consensus 156 ~~vl~~l 162 (162)
T 1tp9_A 156 EDILKDL 162 (162)
T ss_dssp HHHHTTC
T ss_pred HHHHhhC
Confidence 9999986
No 5
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=100.00 E-value=7.8e-36 Score=212.42 Aligned_cols=157 Identities=49% Similarity=0.866 Sum_probs=137.0
Q ss_pred CCCCCCCCCCeeeeeeecC------CCceeEehhhhcCCCeEEEEEeeCCCCCCCCc-CCHhHHHHhHHHHHhCCCCeEE
Q 038822 3 PIAVGDPLPDGTLVYFDEQ------DQLQQVSVHSLAAGKKVILFGVPGDFTPTCSL-KHVPGFIEKADELQSKGVDEIL 75 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~------~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~-~~~~~l~~~~~~~~~~~~~~v~ 75 (162)
++++|+++|++++..++.+ ...++++|+++++||++||+|||++|||+|.. | ++.|++++++|+++|+.+|+
T Consensus 9 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~E-l~~f~~~~~ef~~~g~d~Vi 87 (176)
T 4f82_A 9 MIQVGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQH-VPGYVEHAEQLRAAGIDEIW 87 (176)
T ss_dssp CCCTTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTH-HHHHHHHHHHHHHTTCCEEE
T ss_pred hhhcCCcCCceEEEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHH-HHHHHHHHHHHHhCCCCEEE
Confidence 6899999999999877531 23489999997689999999999999999999 8 99999999999999975799
Q ss_pred EEEcCCHHHHHHHHHhCCCCCc--eEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeC
Q 038822 76 CISVNDPFVMKAWAKTFPKNKS--VKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVS 153 (162)
Q Consensus 76 ~is~d~~~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~ 153 (162)
+||.|+++.+++|.+++++ + |++++|++++++++||+..+....|.+..+.|++|||+||+|+++++++.+..+.+
T Consensus 88 gIS~D~~~~~~~f~~~~~l--~~~f~lLsD~~~~va~ayGv~~~~~~~G~g~~s~R~tfII~dG~I~~~~~~~~~~~~~~ 165 (176)
T 4f82_A 88 CVSVNDAFVMGAWGRDLHT--AGKVRMMADGSAAFTHALGLTQDLSARGMGIRSLRYAMVIDGGVVKTLAVEAPGKFEVS 165 (176)
T ss_dssp EEESSCHHHHHHHHHHTTC--TTTSEEEECTTCHHHHHHTCEEECGGGTCCEEECCEEEEEETTEEEEEEECCTTCCSSS
T ss_pred EEeCCCHHHHHHHHHHhCC--CCCceEEEcCchHHHHHhCCCccccccCCCcccccEEEEEcCCEEEEEEEcCCCCcchh
Confidence 9999999999999999998 6 99999999999999999865333344444567888889999999999886666788
Q ss_pred CHHHHHhcC
Q 038822 154 SADDILKSL 162 (162)
Q Consensus 154 ~~~~il~~l 162 (162)
.++++|++|
T Consensus 166 ~a~~vL~~L 174 (176)
T 4f82_A 166 DAASVLATL 174 (176)
T ss_dssp SHHHHHHTC
T ss_pred hHHHHHHHh
Confidence 999999976
No 6
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=100.00 E-value=5.8e-36 Score=213.45 Aligned_cols=153 Identities=42% Similarity=0.700 Sum_probs=131.8
Q ss_pred CCCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCC-cCCHhHHHHhHHHHHhCCCCeEEE-EEc
Q 038822 2 APIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCS-LKHVPGFIEKADELQSKGVDEILC-ISV 79 (162)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~-~~~~~~l~~~~~~~~~~~~~~v~~-is~ 79 (162)
+++++|+++|+|+|+. +.+|++++|+++++||++||+|||++|||+|+ .| ++.|++++++|+++|+ +|++ ||.
T Consensus 13 ~~~~vG~~aPdf~l~~---~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e-~p~l~~~~~~~~~~gv-~vv~~iS~ 87 (173)
T 3mng_A 13 APIKVGDAIPAVEVFE---GEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTH-LPGFVEQAEALKAKGV-QVVACLSV 87 (173)
T ss_dssp CCCCTTCBCCCCEEEC---SSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTH-HHHHHHTHHHHHTTTC-CEEEEEES
T ss_pred CCCCCCCCCCCeEeee---CCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHH-HHHHHHHHHHHHhCCC-EEEEEEcC
Confidence 4689999999999982 57899999999558999999999999999999 67 9999999999999999 9997 999
Q ss_pred CCHHHHHHHHHhCCCCCc--eEEEEcCCchHHHHcCCccccc---cCCCCccceeEEEEEcCCeEEEEEeec-CCcceeC
Q 038822 80 NDPFVMKAWAKTFPKNKS--VKFLADGSAKYTHALGLELDLS---EKGLGTQSRRFALLVDDLKVKAANVES-GGDFTVS 153 (162)
Q Consensus 80 d~~~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~~gv~~~~~---~~~~~~~~~~~~~ii~~g~i~~~~~~~-~~~~~~~ 153 (162)
|+++.+++|.+++++ + ||+++|++++++++||+..+.. ..| +..+.|++||||||+|+++++++ +...+.+
T Consensus 88 D~~~~~~~f~~~~~~--~~~fp~l~D~~~~va~~yGv~~~~~~~~~~g-~~~~~r~tfvIDdG~I~~~~v~~~~~g~~~~ 164 (173)
T 3mng_A 88 NDAFVTGEWGRAHKA--EGKVRLLADPTGAFGKETDLLLDDSLVSIFG-NRRLKRFSMVVQDGIVKALNVEPDGTGLTCS 164 (173)
T ss_dssp SCHHHHHHHHHHTTC--TTTCEEEECTTCHHHHHHTCBCCSTTHHHHS-SCCBCCEEEEEETTEEEEEEECTTSSCSSTT
T ss_pred CCHHHHHHHHHHhCC--CCceEEEECCChHHHHHhCCCcccccccccC-CcceEEEEEEEECCEEEEEEEeCCCCCcchH
Confidence 999999999999998 6 9999999999999999985311 001 12245778888899999999996 3344689
Q ss_pred CHHHHHhcC
Q 038822 154 SADDILKSL 162 (162)
Q Consensus 154 ~~~~il~~l 162 (162)
+++++|++|
T Consensus 165 ~~~~vl~~l 173 (173)
T 3mng_A 165 LAPNIISQL 173 (173)
T ss_dssp SHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999999986
No 7
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-36 Score=221.60 Aligned_cols=148 Identities=19% Similarity=0.288 Sum_probs=129.1
Q ss_pred CCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHH
Q 038822 4 IAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPF 83 (162)
Q Consensus 4 l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~ 83 (162)
+++|++||||+++++. |.++++++|++| +|||+||+|||++|||+|..| ++.+++++++|++.|+ +|++||.|+++
T Consensus 23 ~~VG~~APdF~l~a~~-d~~~~~vsLsd~-~GK~vVL~FyP~d~TpvCt~E-~~~f~~~~~~f~~~g~-~vigiS~Ds~~ 98 (216)
T 3sbc_A 23 AQVQKQAPTFKKTAVV-DGVFDEVSLDKY-KGKYVVLAFIPLAFTFVSPTE-IIAFSEAAKKFEEQGA-QVLFASTDSEY 98 (216)
T ss_dssp CCTTSBCCCCCEEEEE-TTEEEEECGGGG-TTSEEEEEECSCTTSSHHHHH-HHHHHHHHHHHHHTTE-EEEEEESSCHH
T ss_pred hhcCCcCCCCCCcceE-CCCCcEEehHHh-CCCeEEEEEEcCCCCCcCchh-hhHHHHhHHhhccCCc-eEEEeecCchh
Confidence 7999999999998554 678899999998 999999999999999999998 9999999999999999 99999999999
Q ss_pred HHHHHHHhCC----C-CCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHH
Q 038822 84 VMKAWAKTFP----K-NKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADD 157 (162)
Q Consensus 84 ~~~~~~~~~~----~-~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~ 157 (162)
.+++|.+... . ..+||+++|++++++++||+..+. .+. +.|.+|||| +|+|+++.+++.. ..++++|
T Consensus 99 sh~aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~~~~----~g~-~~R~tFiID~~G~Ir~~~v~~~~--~grn~dE 171 (216)
T 3sbc_A 99 SLLAWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEE----EGV-ALRGLFIIDPKGVIRHITINDLP--VGRNVDE 171 (216)
T ss_dssp HHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCEETT----TTE-ECEEEEEECTTSBEEEEEEECTT--BCCCHHH
T ss_pred hHHHHHHHHHHhCCccCcccceEeCCCCHHHHHcCCeecc----CCc-eeeEEEEECCCCeEEEEEEcCCC--CCCCHHH
Confidence 9999998762 1 128999999999999999998542 234 347899999 9999999998744 3588998
Q ss_pred HHhcC
Q 038822 158 ILKSL 162 (162)
Q Consensus 158 il~~l 162 (162)
+|+.|
T Consensus 172 iLr~l 176 (216)
T 3sbc_A 172 ALRLV 176 (216)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88753
No 8
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=100.00 E-value=1.6e-35 Score=217.18 Aligned_cols=150 Identities=22% Similarity=0.355 Sum_probs=128.9
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCH
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDP 82 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~ 82 (162)
.+++|++||+|++++...|.+|++++|++| +|||+||+|||++|||+|..| +..+++++++|++.|+ +|++||.|+.
T Consensus 25 ~~~vG~~APdF~~~a~l~d~~g~~vsLsd~-~GK~vVL~FyP~d~TpvCt~E-~~~f~~~~~eF~~~g~-~vigiS~Ds~ 101 (219)
T 3tue_A 25 NAKINSPAPSFEEVALMPNGSFKKISLSSY-KGKWVVLFFYPLDFTFVCPTE-VIAFSDSVSRFNELNC-EVLACSIDSE 101 (219)
T ss_dssp CCCTTSBCCCCEEEEECTTSCEEEEEGGGG-TTSEEEEEECSCTTCSSCCHH-HHHHHTTHHHHHTTTE-EEEEEESSCH
T ss_pred ccccCCcCCCCcccccccCCCCcEEehHHh-CCCEEEEEEecccCCCCCchh-HhhHHHHHhhhccCCc-EEEEeeCCch
Confidence 368999999999765444789999999998 999999999999999999999 9999999999999999 9999999999
Q ss_pred HHHHHHHHhCCC-----CCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHH
Q 038822 83 FVMKAWAKTFPK-----NKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSAD 156 (162)
Q Consensus 83 ~~~~~~~~~~~~-----~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~ 156 (162)
+.+++|.+++.. ..+||+++|++++++++||+..+ ..+. +.|.+|||| +|+|+++++++.. ..+.++
T Consensus 102 ~sh~~w~~~~~~~~~~~~l~fpllsD~~~~va~~yGv~~~----~~g~-~~R~tFiIDp~g~Ir~~~~~~~~--~gr~~~ 174 (219)
T 3tue_A 102 YAHLQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLEE----SQGV-AYRGLFIIDPHGMLRQITVNDMP--VGRSVE 174 (219)
T ss_dssp HHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEET----TTTE-ECEEEEEECTTSBEEEEEEECTT--CCCCHH
T ss_pred hhHHHHhhhhHHhcCccccccccccCcccHHHHHcCCccc----CCCe-eEEEEEEECCCCeEEEEEEecCC--CCCCHH
Confidence 999999987521 12899999999999999999854 2234 347899999 9999999987633 247888
Q ss_pred HHHhcC
Q 038822 157 DILKSL 162 (162)
Q Consensus 157 ~il~~l 162 (162)
|+|+.|
T Consensus 175 EvLr~l 180 (219)
T 3tue_A 175 EVLRLL 180 (219)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888753
No 9
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=100.00 E-value=2.2e-35 Score=209.63 Aligned_cols=155 Identities=36% Similarity=0.604 Sum_probs=129.8
Q ss_pred CCCCCCCCCCCeeeeeeecCCC-ceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCe-EEEEEc
Q 038822 2 APIAVGDPLPDGTLVYFDEQDQ-LQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDE-ILCISV 79 (162)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~~~-g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~-v~~is~ 79 (162)
+++++|+++|+|+|+ +.+ +++++|+++++|||+||+|||+.|||+|..| ++.+++.+++|+++|+ + |++||.
T Consensus 12 ~~~~vGd~aPdf~l~----~~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e-~~~f~~~~~ef~~~gv-~~VigIS~ 85 (171)
T 2xhf_A 12 SPIKVGDIIPDVLVY----EDVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNH-IPEYLSLYDKFKEEGY-HTIACIAV 85 (171)
T ss_dssp CCCCTTCBCCCCEEE----CSSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSS-HHHHHHTHHHHHHTTC-CEEEEEES
T ss_pred CcccCcCCCCCeEEe----cCCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHH-HHHHHHHHHHHHHCCC-CEEEEEeC
Confidence 478999999999999 444 3899999955899999999999999999998 9999999999999999 7 999999
Q ss_pred CCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEcCCeEEEEEeec-CCcceeCCHHHH
Q 038822 80 NDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVDDLKVKAANVES-GGDFTVSSADDI 158 (162)
Q Consensus 80 d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~-~~~~~~~~~~~i 158 (162)
|+++.+++|.+++++..+|++++|++++++++||+..+....+.+..+.|++||||||+|+++++.+ +.....+.++++
T Consensus 86 D~~~~~~~w~~~~~~~~~f~lLSD~~~~~a~ayGv~~~~~~~g~g~~~~R~tfvIddG~V~~~~v~~~~~~~~~s~a~~v 165 (171)
T 2xhf_A 86 NDPFVMAAWGKTVDPEHKIRMLADMHGEFTRALGTELDSSKMLGNNRSRRYAMLIDDNKIRSVSTEPDITGLACLLSIQR 165 (171)
T ss_dssp SCHHHHHHHHHHHCTTCCSEEEECTTSHHHHHHTCBCCCHHHHSSCCBCCEEEEEETTEEEEEEETTSCSHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCCCCeEEEEeCCchHHHHhCCceeccccCCCcceEEEEEEEeCCEEEEEEEeCCCCcccCCCHHHH
Confidence 9999999999999864479999999999999999986432112233456889999999999999976 443346788998
Q ss_pred HhcC
Q 038822 159 LKSL 162 (162)
Q Consensus 159 l~~l 162 (162)
|+++
T Consensus 166 L~~~ 169 (171)
T 2xhf_A 166 QKEN 169 (171)
T ss_dssp C---
T ss_pred HHHh
Confidence 8764
No 10
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=100.00 E-value=1.4e-34 Score=205.83 Aligned_cols=153 Identities=35% Similarity=0.628 Sum_probs=125.1
Q ss_pred CCCCCCCCeeeeeeecCC----Cc-----eeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCe-E
Q 038822 5 AVGDPLPDGTLVYFDEQD----QL-----QQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDE-I 74 (162)
Q Consensus 5 ~~G~~~P~f~l~~~~~~~----~g-----~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~-v 74 (162)
.+|+++|+|+++ +. +| ++++|+++++||++||+|||++|||+|+.||++.|++++++|+++|+ + |
T Consensus 8 ~~g~~aP~f~l~----~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~-~~v 82 (171)
T 2pwj_A 8 DILSAASNVSLQ----KARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGV-DSV 82 (171)
T ss_dssp --CCCSSSBCCC----SCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTC-SEE
T ss_pred cccCcCCCeEEe----cccccccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCC-CEE
Confidence 345599999999 65 46 89999995489889999999999999999669999999999999999 8 9
Q ss_pred EEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEcCCeEEEEEeec-CCcceeC
Q 038822 75 LCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVDDLKVKAANVES-GGDFTVS 153 (162)
Q Consensus 75 ~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~-~~~~~~~ 153 (162)
++||.|+++.+++|.+++++..+||+++|++++++++||+..+....+.|....|.+++++||+|++.+++. +.....+
T Consensus 83 v~Is~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~~~~~g~~~~~~t~~I~~G~I~~~~~~~~~~~~~~~ 162 (171)
T 2pwj_A 83 ICVAINDPYTVNAWAEKIQAKDAIEFYGDFDGSFHKSLELTTDLSAGLLGIRSERWSAYVVDGKVKALNVEESPSDVKVS 162 (171)
T ss_dssp EEEESSCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECTTTTCCEEECCEEEEEETTEEEEEEECSSTTCCSSS
T ss_pred EEEeCCCHHHHHHHHHHhCCCCceEEEECCccHHHHHhCCccccccccCCcccceeEEEEECCEEEEEEeecCCCCCccc
Confidence 999999999999999999942279999999999999999985432222233223445555599999999986 4445678
Q ss_pred CHHHHHhcC
Q 038822 154 SADDILKSL 162 (162)
Q Consensus 154 ~~~~il~~l 162 (162)
+++++|++|
T Consensus 163 ~~~~il~~l 171 (171)
T 2pwj_A 163 GAETILGQI 171 (171)
T ss_dssp SHHHHHHHC
T ss_pred CHHHHHhcC
Confidence 999999876
No 11
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=100.00 E-value=7.3e-34 Score=201.50 Aligned_cols=153 Identities=44% Similarity=0.721 Sum_probs=128.4
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCc-CCHhHHHHhHHHHHhCCCCeEEEEEcCC
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSL-KHVPGFIEKADELQSKGVDEILCISVND 81 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~-~~~~~l~~~~~~~~~~~~~~v~~is~d~ 81 (162)
++++|+++|+|+++. +.+|++++|+++++||++||+|||++|||+|+. | +|.|++++++|+++|+.+|++||.|+
T Consensus 2 ~l~~G~~aP~f~l~~---~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e-~p~l~~~~~~~~~~gv~~vv~Is~d~ 77 (167)
T 2wfc_A 2 PIKEGDKLPAVTVFG---ATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTH-LPGYVEQAAAIHGKGVDIIACMAVND 77 (167)
T ss_dssp CCCTTCBCCCCEEES---SSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTH-HHHHHHTHHHHHHTTCCEEEEEESSC
T ss_pred CCCCCCcCCCcEeec---CCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHH-HHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 389999999999971 578999999997689999999999999999999 9 99999999999988864699999999
Q ss_pred HHHHHHHHHhCCCCCc--eEEEEcCCchHHHHcCCcccccc-CCCCccceeEEEEEcCCeEEEEEeec-CCcceeCCHHH
Q 038822 82 PFVMKAWAKTFPKNKS--VKFLADGSAKYTHALGLELDLSE-KGLGTQSRRFALLVDDLKVKAANVES-GGDFTVSSADD 157 (162)
Q Consensus 82 ~~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~~gv~~~~~~-~~~~~~~~~~~~ii~~g~i~~~~~~~-~~~~~~~~~~~ 157 (162)
++.+++|.+++++ + ||+++|++++++++||+...... .+. ..+.|++||+++|+|++.++++ +...+.+.++.
T Consensus 78 ~~~~~~~~~~~~~--~~~fp~l~D~~~~~~~~~gv~~~~~~~~g~-~~~~p~t~lI~~G~I~~~~~~~~~~~~~~~~~~~ 154 (167)
T 2wfc_A 78 SFVMDAWGKAHGA--DDKVQMLADPGGAFTKAVDMELDLSAVLGN-VRSKRYSLVIEDGVVTKVNVEPDGKGLTCSLAPN 154 (167)
T ss_dssp HHHHHHHHHHTTC--TTTSEEEECTTSHHHHHTTCEECCHHHHSS-CEECCEEEEEETTEEEEEEECTTSSSSSTTSHHH
T ss_pred HHHHHHHHHhcCC--CcceEEEECCCCcHHHHcCCccccccccCc-ccceEEEEEEeCCEEEEEEecCCCCcceeccHHH
Confidence 9999999999998 7 99999999999999999742100 010 1123567777999999999986 44446789999
Q ss_pred HHhcC
Q 038822 158 ILKSL 162 (162)
Q Consensus 158 il~~l 162 (162)
+|++|
T Consensus 155 ~~~~~ 159 (167)
T 2wfc_A 155 ILSQL 159 (167)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98864
No 12
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=100.00 E-value=9.1e-34 Score=203.36 Aligned_cols=152 Identities=27% Similarity=0.560 Sum_probs=128.2
Q ss_pred CCCCCCCCCeeeeeeecC--C---------Cc----eeEehhhhcCCCeEEEEEeeCCCCCCCC-cCCHhHHHHhHHHH-
Q 038822 4 IAVGDPLPDGTLVYFDEQ--D---------QL----QQVSVHSLAAGKKVILFGVPGDFTPTCS-LKHVPGFIEKADEL- 66 (162)
Q Consensus 4 l~~G~~~P~f~l~~~~~~--~---------~g----~~~~l~~~~~gk~vvl~f~~~~~cp~C~-~~~~~~l~~~~~~~- 66 (162)
+++|+++|+|+|+ + . +| ++++|+++++|||+||+|||+.|||+|. .| ++.+++.+++|
T Consensus 1 l~vGd~aPdf~l~----~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e-~~~f~~~~~~f~ 75 (182)
T 1xiy_A 1 MKENDLIPNVKVM----IDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKM-IPGYEEEYDYFI 75 (182)
T ss_dssp CCTTCBCCCCEEE----EEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTH-HHHHHHTHHHHH
T ss_pred CCCCCCCCCeEEE----cccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHH-HHHHHHHHHHHH
Confidence 5789999999999 4 2 56 7999999658999999999999999999 87 99999999999
Q ss_pred HhCCCCe-EEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEcCCeEEEEEee
Q 038822 67 QSKGVDE-ILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVDDLKVKAANVE 145 (162)
Q Consensus 67 ~~~~~~~-v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~ 145 (162)
++.|+ + |++||.|+++.+++|.+++++. +|++++|++++++++||+..+....|.+..+.|++|||++|+|+++++.
T Consensus 76 ~~~g~-~~V~gvS~D~~~~~~~~~~~~~~~-~f~lLsD~~~~~a~~yGv~~~~~~~G~g~~~~R~tfvIddG~V~~~~v~ 153 (182)
T 1xiy_A 76 KENNF-DDIYCITNNDIYVLKSWFKSMDIK-KIKYISDGNSSFTDSMNMLVDKSNFFMGMRPWRFVAIVENNILVKMFQE 153 (182)
T ss_dssp TTSCC-SEEEEEESSCHHHHHHHHHHTTCC-SSEEEECTTSHHHHHTTCEEECGGGTCCEEECCEEEEEETTEEEEEEEC
T ss_pred HhCCC-cEEEEEeCCCHHHHHHHHHHcCCC-CceEEEeCchHHHHHhCCceeccccCCCCceEEEEEEEcCCEEEEEEEe
Confidence 99999 6 9999999999999999999872 5999999999999999998654333444446788999999999999987
Q ss_pred c-CC------cceeCCHHHHHhcC
Q 038822 146 S-GG------DFTVSSADDILKSL 162 (162)
Q Consensus 146 ~-~~------~~~~~~~~~il~~l 162 (162)
. .. +.+.+.++++|+.|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~vL~~L 177 (182)
T 1xiy_A 154 KDKQHNIQTDPYDISTVNNVKEFL 177 (182)
T ss_dssp SSCCTTCSSCCCSTTSHHHHHHHH
T ss_pred CCcccccccCcccCCCHHHHHHHH
Confidence 5 22 12357888888764
No 13
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=100.00 E-value=1.6e-33 Score=197.88 Aligned_cols=148 Identities=18% Similarity=0.182 Sum_probs=124.9
Q ss_pred CCCCCCCCCCCCee--eeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEE
Q 038822 1 MAPIAVGDPLPDGT--LVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCIS 78 (162)
Q Consensus 1 m~~l~~G~~~P~f~--l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is 78 (162)
|+.+++|+++|+|+ ++ +.+|++++|+++ +||++||+||+++|||+|+.+ ++.|++++++++++|+ +|++||
T Consensus 4 m~~l~~G~~~P~f~~~l~----~~~G~~~~l~~~-~gk~~vl~F~~~~~c~~C~~~-~~~l~~~~~~~~~~~~-~vv~vs 76 (163)
T 3gkn_A 4 MTDAVLELPAATFDLPLS----LSGGTQTTLRAH-AGHWLVIYFYPKDSTPGATTE-GLDFNALLPEFDKAGA-KILGVS 76 (163)
T ss_dssp CCCCCCCCCGGGGGCCEE----CSTTCEECSGGG-TTSCEEEEECSCTTSHHHHHH-HHHHHHHHHHHHHTTC-EEEEEE
T ss_pred ccccccCCcCCCcccccc----CCCCCEEEHHHh-CCCcEEEEEeCCCCCCcHHHH-HHHHHHHHHHHHHCCC-EEEEEe
Confidence 66799999999999 99 899999999998 899999999988999999998 9999999999999999 999999
Q ss_pred cCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCC-ccceeEEEEEc-CCeEEEEEeecCCcceeCCHH
Q 038822 79 VNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLG-TQSRRFALLVD-DLKVKAANVESGGDFTVSSAD 156 (162)
Q Consensus 79 ~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~-~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~ 156 (162)
.|+++.+++|.+++++ +|++++|+++++++.||+.......+.. ....|++||+| +|+|++.+.+.... ..++
T Consensus 77 ~d~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~---~~~~ 151 (163)
T 3gkn_A 77 RDSVKSHDNFCAKQGF--AFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVA---GHAD 151 (163)
T ss_dssp SSCHHHHHHHHHHHCC--SSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEECSCCST---THHH
T ss_pred CCCHHHHHHHHHHhCC--CceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEEcCCCcc---cCHH
Confidence 9999999999999998 9999999999999999997532111110 00146699999 99999999543332 4455
Q ss_pred HHHh
Q 038822 157 DILK 160 (162)
Q Consensus 157 ~il~ 160 (162)
++++
T Consensus 152 ~il~ 155 (163)
T 3gkn_A 152 AVLA 155 (163)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 14
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=100.00 E-value=1.7e-32 Score=202.48 Aligned_cols=144 Identities=18% Similarity=0.184 Sum_probs=120.5
Q ss_pred CCCCCCCCCCCCeeeeeeecCC--Cc--eeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEE
Q 038822 1 MAPIAVGDPLPDGTLVYFDEQD--QL--QQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILC 76 (162)
Q Consensus 1 m~~l~~G~~~P~f~l~~~~~~~--~g--~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~ 76 (162)
|+.+++|+++|+|+++ +. +| ++++|+++++||++||+||+++|||+|+.+ ++.|++++++|+++++ +|++
T Consensus 22 M~~l~~G~~aP~F~l~----~~~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e-~p~l~~l~~~~~~~~v-~vv~ 95 (221)
T 2c0d_A 22 MKLSLVTKKAYNFTAQ----GLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTE-IIEFNKHIKDFENKNV-ELLG 95 (221)
T ss_dssp ----CTTSBCCCCEEE----EECTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHH-HHHHHHTHHHHHHTTE-EEEE
T ss_pred cccCCCCCCCCCeEEe----ccccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHH-HHHHHHHHHHHHHCCC-EEEE
Confidence 6678999999999999 66 88 999999965899999999999999999998 9999999999999999 9999
Q ss_pred EEcCCHHHHHHHHHhC-------CCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCC
Q 038822 77 ISVNDPFVMKAWAKTF-------PKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGG 148 (162)
Q Consensus 77 is~d~~~~~~~~~~~~-------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~ 148 (162)
||.|+++.+++|.+++ ++ +|++++|+++++++.||+. +. . +. ..|.+||+| +|+|++.+.+...
T Consensus 96 Is~D~~~~~~~~~~~~~~~~g~~~~--~fp~l~D~~~~~~~~ygv~-~~--~--g~-~~P~~~lID~~G~I~~~~~g~~~ 167 (221)
T 2c0d_A 96 ISVDSVYSHLAWKNMPIEKGGIGNV--EFTLVSDINKDISKNYNVL-YD--N--SF-ALRGLFIIDKNGCVRHQTVNDLP 167 (221)
T ss_dssp EESSCHHHHHHHHHSCGGGTCCCSC--SSEEEECTTSHHHHHTTCE-ET--T--TE-ECEEEEEECTTSBEEEEEEECTT
T ss_pred EeCCCHHHHHHHHHHhhhhcCccCC--ceEEEECCchHHHHHcCCc-cc--C--CC-ccceEEEECCCCeEEEEEecCCC
Confidence 9999999999999998 66 8999999999999999996 31 1 22 245699999 9999999987532
Q ss_pred cceeCCHHHHHh
Q 038822 149 DFTVSSADDILK 160 (162)
Q Consensus 149 ~~~~~~~~~il~ 160 (162)
. ..+++++++
T Consensus 168 ~--~~~~~ell~ 177 (221)
T 2c0d_A 168 I--GRNVQEVLR 177 (221)
T ss_dssp C--CCCHHHHHH
T ss_pred C--CCCHHHHHH
Confidence 1 245555554
No 15
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=100.00 E-value=3.1e-32 Score=204.85 Aligned_cols=147 Identities=21% Similarity=0.350 Sum_probs=125.9
Q ss_pred CCCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCC
Q 038822 2 APIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVND 81 (162)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~ 81 (162)
..+.+|+++|+|+++.+. +.+|++++|+++ +||++||+||+++|||+|+.+ ++.|++++++|+++|+ +|++||.|+
T Consensus 60 ~~l~vG~~aPdF~l~~l~-d~~G~~vsLsd~-kGK~vvL~F~~a~~cp~C~~e-l~~l~~l~~~~~~~gv-~vv~IS~D~ 135 (254)
T 3tjj_A 60 SKAKISKPAPYWEGTAVI-DGEFKELKLTDY-RGKYLVFFFYPLDFTFVCPTE-IIAFGDRLEEFRSINT-EVVACSVDS 135 (254)
T ss_dssp CCCCTTSBCCCCEEEEEE-TTEEEEEEGGGG-TTSEEEEEECSCTTCSSCCHH-HHHHHHTHHHHHTTTE-EEEEEESSC
T ss_pred cccCCCCCCCCcEeeeec-CCCCcEEeHHHH-CCCeEEEEEECCCCCCchHHH-HHHHHHHHHHHHHcCC-EEEEEcCCC
Confidence 468899999999988443 567899999998 999999999999999999998 9999999999999999 999999999
Q ss_pred HHHHHHHHHhC-------CCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeC
Q 038822 82 PFVMKAWAKTF-------PKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVS 153 (162)
Q Consensus 82 ~~~~~~~~~~~-------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~ 153 (162)
.+.+++|++++ ++ +||+++|+++++++.||+..+. . +. ..|.+|||| +|+|++++.++.. ..+
T Consensus 136 ~~~~~~~~~~~~~~~g~~~~--~fp~l~D~~~~va~~ygv~~~~--~--g~-~~p~tflID~~G~I~~~~~~~~~--~~~ 206 (254)
T 3tjj_A 136 QFTHLAWINTPRRQGGLGPI--RIPLLSDLTHQISKDYGVYLED--S--GH-TLRGLFIIDDKGILRQITLNDLP--VGR 206 (254)
T ss_dssp HHHHHHHHTSCGGGTSCCSC--SSCEEECTTSHHHHHHTCEETT--T--TE-ECEEEEEECTTSBEEEEEEECTT--CCC
T ss_pred HHHHHHHHHHHHHhcCCccc--ccceeeCcHHHHHHHcCCcccc--C--CC-ccceEEEECCCCeEEEEEecCCC--CCC
Confidence 99999999987 66 9999999999999999997531 1 22 246699999 9999999998633 235
Q ss_pred CHHHHHhc
Q 038822 154 SADDILKS 161 (162)
Q Consensus 154 ~~~~il~~ 161 (162)
.++++++.
T Consensus 207 ~~~eil~~ 214 (254)
T 3tjj_A 207 SVDETLRL 214 (254)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 67777654
No 16
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=100.00 E-value=1.6e-32 Score=192.77 Aligned_cols=140 Identities=19% Similarity=0.280 Sum_probs=121.8
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCe-EEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCC
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKK-VILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVND 81 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~-vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~ 81 (162)
++++|+++|+|+++ +.+|++++|+++ +||+ +||+||+++|||+|+.+ ++.|++++++++++|+ +|++|+.|+
T Consensus 1 ml~~G~~~P~f~l~----~~~G~~~~l~~~-~gk~~vvl~F~~a~~C~~C~~~-~~~l~~~~~~~~~~~v-~vv~vs~d~ 73 (161)
T 3drn_A 1 MVKVGDKAPLFEGI----ADNGEKISLSDY-IGKHNIVLYFYPKDDTPGSTRE-ASAFRDNWDLLKDYDV-VVIGVSSDD 73 (161)
T ss_dssp -CCTTSBCCCCEEE----ETTSCEEEGGGT-TTTSEEEEEECSCTTCHHHHHH-HHHHHHTHHHHHTTCE-EEEEEESCC
T ss_pred CCCCCCcCCCeEee----cCCCCEEEHHHh-cCCCCEEEEEEcCCCCCchHHH-HHHHHHHHHHHHHcCC-EEEEEeCCC
Confidence 47999999999999 899999999997 8997 99999999999999998 9999999999999999 999999999
Q ss_pred HHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeec-CCcceeCCHHHHH
Q 038822 82 PFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVES-GGDFTVSSADDIL 159 (162)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~-~~~~~~~~~~~il 159 (162)
++..++|.+++++ +|++++|+++++++.||+.. ... ..|.+||+| +|+|++.+.+. ... +.+++++
T Consensus 74 ~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~v~~------~~~-~~P~~~lid~~G~i~~~~~g~~~~~---~~~~~il 141 (161)
T 3drn_A 74 INSHKRFKEKYKL--PFILVSDPDKKIRELYGAKG------FIL-PARITFVIDKKGIIRHIYNSQMNPA---NHVNEAL 141 (161)
T ss_dssp HHHHHHHHHHTTC--CSEEEECTTSHHHHHTTCCC------SSS-CCCEEEEECTTSBEEEEEECSSCTT---HHHHHHH
T ss_pred HHHHHHHHHHhCC--CceEEECCcHHHHHHcCCCC------cCc-ccceEEEECCCCEEEEEEecCCCCC---cCHHHHH
Confidence 9999999999999 99999999999999999971 111 134599999 99999999984 332 4555555
Q ss_pred hc
Q 038822 160 KS 161 (162)
Q Consensus 160 ~~ 161 (162)
+.
T Consensus 142 ~~ 143 (161)
T 3drn_A 142 KA 143 (161)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 17
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=100.00 E-value=2.9e-33 Score=200.18 Aligned_cols=148 Identities=15% Similarity=0.175 Sum_probs=124.7
Q ss_pred CCCCCCCC----CCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEE
Q 038822 2 APIAVGDP----LPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCI 77 (162)
Q Consensus 2 ~~l~~G~~----~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~i 77 (162)
.++++|+. +|+|+++ +.+|++++|+++ +||++||+||+++|||+|+.+ ++.|++++++++++++ +|++|
T Consensus 19 ~~l~~Gd~ig~~aP~f~l~----~~~G~~v~l~d~-~Gk~vvl~f~~~~~c~~C~~e-l~~l~~l~~~~~~~~~-~vv~V 91 (179)
T 3ixr_A 19 SHMNIGDTLNHSLLNHPLM----LSGSTCKTLSDY-TNQWLVLYFYPKDNTPGSSTE-GLEFNLLLPQFEQINA-TVLGV 91 (179)
T ss_dssp CSSCTTCBCCHHHHHCCEE----EGGGEEECGGGG-TTSEEEEEECSCTTSHHHHHH-HHHHHHHHHHHHTTTE-EEEEE
T ss_pred cccCcCcccCCcCCCeeEE----CCCCCEEeHHHH-CCCCEEEEEEcCCCCCchHHH-HHHHHHHHHHHHHCCC-EEEEE
Confidence 36889999 9999999 899999999998 999999999999999999998 9999999999999999 99999
Q ss_pred EcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCC-ccceeEEEEEc-CCeEEEEEeecCCcceeCCH
Q 038822 78 SVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLG-TQSRRFALLVD-DLKVKAANVESGGDFTVSSA 155 (162)
Q Consensus 78 s~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~-~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~ 155 (162)
|.|+++.+++|.+++++ +|++++|+++++++.||+.......+.. ....|++||+| +|+|++++.+.... ..+
T Consensus 92 s~D~~~~~~~~~~~~~~--~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~---~~~ 166 (179)
T 3ixr_A 92 SRDSVKSHDSFCAKQGF--TFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVP---GHA 166 (179)
T ss_dssp ESCCHHHHHHHHHHHTC--CSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEECSCCST---THH
T ss_pred cCCCHHHHHHHHHHcCC--ceEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEEcCCCCC---CCH
Confidence 99999999999999998 9999999999999999997543211111 01246799999 99999999543332 455
Q ss_pred HHHHhc
Q 038822 156 DDILKS 161 (162)
Q Consensus 156 ~~il~~ 161 (162)
+++++.
T Consensus 167 ~~il~~ 172 (179)
T 3ixr_A 167 EEVLNK 172 (179)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 565543
No 18
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=100.00 E-value=1.5e-32 Score=204.17 Aligned_cols=148 Identities=21% Similarity=0.355 Sum_probs=123.8
Q ss_pred CCCCCCCCCCCCeeeeeeecCCCceeEehhhhcCCC-eEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEc
Q 038822 1 MAPIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGK-KVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISV 79 (162)
Q Consensus 1 m~~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk-~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~ 79 (162)
|+ +.+|+++|+|+++ +.+| +++|+++ +|+ |+||+||+++|||+|+.| ++.|++++++|+++|+ +|++||.
T Consensus 1 M~-l~iG~~aPdF~l~----~~~G-~v~l~d~-~Gk~~vvL~f~pa~~cpvC~~e-l~~l~~l~~ef~~~~v-~vigIS~ 71 (233)
T 2v2g_A 1 MG-ITLGEVFPNFEAD----STIG-KLKFHDW-LGNSWGVLFSHPRDFTPVSTTE-LGRVIQLEGDFKKRGV-KLIALSC 71 (233)
T ss_dssp -C-CCTTCBCCCCEEE----ETTC-CEEHHHH-HCSSEEEEEECSCSSCHHHHHH-HHHHHHTHHHHHHTTE-EEEEEES
T ss_pred CC-CCCCCCCCCcEEe----cCCC-CEEHHHH-CCCCeEEEEEECCCCCCCcHHH-HHHHHHHHHHHHHcCC-EEEEEcC
Confidence 55 8999999999999 7888 9999998 677 999999999999999998 9999999999999999 9999999
Q ss_pred CCHHHHHHHHH------hC--CCCCceEEEEcCCchHHHHcCCccccccCCCC-ccceeEEEEEc-CCeEEEEEeecCCc
Q 038822 80 NDPFVMKAWAK------TF--PKNKSVKFLADGSAKYTHALGLELDLSEKGLG-TQSRRFALLVD-DLKVKAANVESGGD 149 (162)
Q Consensus 80 d~~~~~~~~~~------~~--~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~-~~~~~~~~ii~-~g~i~~~~~~~~~~ 149 (162)
|+.+.+++|.+ ++ ++ +||+++|+++++++.||+..+.+..+.+ ..+.|.+|||| +|+|++++.++..
T Consensus 72 D~~~~~~~~~~~i~~~~~~~~~~--~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~- 148 (233)
T 2v2g_A 72 DNVADHKEWSEDVKCLSGVKGDM--PYPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPAT- 148 (233)
T ss_dssp SCHHHHHHHHHHHHHHHTCCSSC--SSCEEECTTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTT-
T ss_pred CCHHHHHHHHHHHHHhhCcccCC--ceEEEECChHHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCC-
Confidence 99999999998 56 77 9999999999999999997532111111 12357799999 9999999987632
Q ss_pred ceeCCHHHHHhc
Q 038822 150 FTVSSADDILKS 161 (162)
Q Consensus 150 ~~~~~~~~il~~ 161 (162)
..++++++++.
T Consensus 149 -~gr~~~eilr~ 159 (233)
T 2v2g_A 149 -TGRNFSEILRV 159 (233)
T ss_dssp -BCCCHHHHHHH
T ss_pred -CCCCHHHHHHH
Confidence 13567777664
No 19
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.98 E-value=6.7e-32 Score=201.22 Aligned_cols=150 Identities=35% Similarity=0.630 Sum_probs=124.5
Q ss_pred CCCCCCCCCeeeeeeecCC-Cce--eEehhh-hcCCCeEEEEEeeCCCCCCCC-cCCHhHHHHhHHHHHhCCCCeEEEEE
Q 038822 4 IAVGDPLPDGTLVYFDEQD-QLQ--QVSVHS-LAAGKKVILFGVPGDFTPTCS-LKHVPGFIEKADELQSKGVDEILCIS 78 (162)
Q Consensus 4 l~~G~~~P~f~l~~~~~~~-~g~--~~~l~~-~~~gk~vvl~f~~~~~cp~C~-~~~~~~l~~~~~~~~~~~~~~v~~is 78 (162)
+++|+++|+|+++ +. +|+ +++|++ + +||++||+|||++|||+|+ .| ++.|++++++|+++|+.+|++||
T Consensus 3 ~~~G~~aP~f~l~----~~~~g~~~~v~l~~~~-~gk~vvl~f~~a~~cp~C~~~e-~~~l~~~~~~~~~~~~~~vv~is 76 (241)
T 1nm3_A 3 SMEGKKVPQVTFR----TRQGDKWVDVTTSELF-DNKTVIVFSLPGAFTPTCSSSH-LPRYNELAPVFKKYGVDDILVVS 76 (241)
T ss_dssp CCTTSBCCCCEEE----EEETTEEEEEEHHHHH-TTSEEEEEEESCSSCHHHHHTH-HHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ccCCCCCCCeEEE----cccCCCceeecHHHHh-CCCeEEEEEeCCCCCCCCCHHH-HHHHHHHHHHHHHCCCCEEEEEE
Confidence 8999999999999 64 676 999999 7 9999999999999999999 98 99999999999988863599999
Q ss_pred cCCHHHHHHHHHhCCCCCc-eEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEcCCeEEEEEeecCCc---ceeCC
Q 038822 79 VNDPFVMKAWAKTFPKNKS-VKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGD---FTVSS 154 (162)
Q Consensus 79 ~d~~~~~~~~~~~~~~~~~-~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~---~~~~~ 154 (162)
.|+++.+++|.+++++ + |++++|++++++++||+..+....|.+..+.|++||+++|+|++.+.+.... .+..+
T Consensus 77 ~d~~~~~~~~~~~~~~--~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~t~li~~G~i~~~~~~~~~~~~~~~~~~ 154 (241)
T 1nm3_A 77 VNDTFVMNAWKEDEKS--ENISFIPDGNGEFTEGMGMLVGKEDLGFGKRSWRYSMLVKNGVVEKMFIEPNEPGDPFKVSD 154 (241)
T ss_dssp SSCHHHHHHHHHHTTC--TTSEEEECTTSHHHHHTTCEEECTTTTCCEEECCEEEEEETTEEEEEEECCSCSSCCCSSSS
T ss_pred cCCHHHHHHHHHhcCC--CceEEEECCCcHHHHHhCceeecccccCcccceeEEEEEECCEEEEEEEeccCCCccceecC
Confidence 9999999999999997 6 9999999999999999985432222221233557777999999999986321 12367
Q ss_pred HHHHHhc
Q 038822 155 ADDILKS 161 (162)
Q Consensus 155 ~~~il~~ 161 (162)
++++|+.
T Consensus 155 ~~~il~~ 161 (241)
T 1nm3_A 155 ADTMLKY 161 (241)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8888765
No 20
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.98 E-value=9.1e-32 Score=189.85 Aligned_cols=147 Identities=21% Similarity=0.281 Sum_probs=124.4
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCH
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDP 82 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~ 82 (162)
.+++|+++|+|+++ +.+|++++|+++ +||++||+||+++|||+|+.+ ++.|+++++++ .++ +|++||.|++
T Consensus 16 ~~~~G~~~P~f~l~----~~~G~~v~l~~~-~gk~vvl~f~~~~~c~~C~~e-~~~l~~~~~~~--~~v-~vv~Is~d~~ 86 (165)
T 1q98_A 16 FPQVGEIVENFILV----GNDLADVALNDF-ASKRKVLNIFPSIDTGVCATS-VRKFNQQAAKL--SNT-IVLCISADLP 86 (165)
T ss_dssp CCCTTCBCCCCEEE----CTTSCEEEGGGG-TTSEEEEEECSCSCSSCCCHH-HHHHHHHHHHS--TTE-EEEEEESSCH
T ss_pred cCCCCCCCCCeEEE----CCCCCEEehHHh-CCCeEEEEEECCCCCCccHHH-HHHHHHHHHHc--CCC-EEEEEeCCCH
Confidence 47899999999999 899999999997 999999999999999999998 99999999999 688 9999999999
Q ss_pred HHHHHHHHhCCCCCceEEEEcC-CchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHHHh
Q 038822 83 FVMKAWAKTFPKNKSVKFLADG-SAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~D~-~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
+.+++|.+++++ .+|++++|+ ++++++.||+..... ...+. ..|.+||+| +|+|++.+.+.... +..+++++|+
T Consensus 87 ~~~~~~~~~~~~-~~~~~l~D~~~~~~~~~~gv~~~~~-~~~g~-~~p~~~liD~~G~i~~~~~~~~~~-~~~~~~~~l~ 162 (165)
T 1q98_A 87 FAQARFCGAEGI-ENAKTVSTFRNHALHSQLGVDIQTG-PLAGL-TSRAVIVLDEQNNVLHSQLVEEIK-EEPNYEAALA 162 (165)
T ss_dssp HHHTTCTTTTTC-TTEEEEECTTCTHHHHHTTCEECSS-TTTTS-BCCEEEEECTTSBEEEEEECSBTT-SCCCHHHHHH
T ss_pred HHHHHHHHHcCC-CceEEeeccccchHHHHhCceeccc-ccCCc-cceeEEEEcCCCEEEEEEeCCCCC-CCCCHHHHHH
Confidence 999999999986 149999998 899999999974310 01122 236699999 99999999864221 3478999988
Q ss_pred cC
Q 038822 161 SL 162 (162)
Q Consensus 161 ~l 162 (162)
.|
T Consensus 163 ~l 164 (165)
T 1q98_A 163 VL 164 (165)
T ss_dssp TT
T ss_pred hh
Confidence 65
No 21
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.98 E-value=4.1e-32 Score=200.81 Aligned_cols=148 Identities=24% Similarity=0.362 Sum_probs=122.7
Q ss_pred CC-CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCC-eEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEE
Q 038822 1 MA-PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGK-KVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCIS 78 (162)
Q Consensus 1 m~-~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk-~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is 78 (162)
|+ .+.+|+++|+|+++ +.+| +++|+++ +|+ |+||+||+++|||+|+.| ++.|++++++|+++|+ +|++||
T Consensus 1 M~~~l~~G~~aP~F~l~----~~~G-~v~l~d~-~Gk~~vvL~~~~a~~cp~C~~e-l~~l~~l~~~f~~~~v-~vi~IS 72 (224)
T 1prx_A 1 MPGGLLLGDVAPNFEAN----TTVG-RIRFHDF-LGDSWGILFSHPRDFTPVCTTE-LGRAAKLAPEFAKRNV-KLIALS 72 (224)
T ss_dssp ----CCTTCBCCCCEEE----ETTE-EEEHHHH-HTTSEEEEEEESCSSCHHHHHH-HHHHHHHHHHHHTTTE-EEEEEE
T ss_pred CCCcCCCcCCCCCcEEe----cCCC-CEEHHHH-cCCCeEEEEEECCCCCCCcHHH-HHHHHHHHHHHHHCCC-EEEEEc
Confidence 45 58999999999999 7888 9999998 676 999999999999999998 9999999999999999 999999
Q ss_pred cCCHHHHHHHHHh----------CCCCCceEEEEcCCchHHHHcCCcccccc--CCCCccceeEEEEEc-CCeEEEEEee
Q 038822 79 VNDPFVMKAWAKT----------FPKNKSVKFLADGSAKYTHALGLELDLSE--KGLGTQSRRFALLVD-DLKVKAANVE 145 (162)
Q Consensus 79 ~d~~~~~~~~~~~----------~~~~~~~~~l~D~~~~~~~~~gv~~~~~~--~~~~~~~~~~~~ii~-~g~i~~~~~~ 145 (162)
.|+.+.+++|.++ +++ +||+++|+++++++.||+..+.+. .+... +.|.+|||| +|+|++++.+
T Consensus 73 ~D~~~~~~~~~~~i~~~~~~~~~~~~--~fpil~D~~~~va~~ygv~~~~~~~~~g~~~-~~p~~fiID~~G~I~~~~~~ 149 (224)
T 1prx_A 73 IDSVEDHLAWSKDINAYNSEEPTEKL--PFPIIDDRNRELAILLGMLDPAEKDEKGMPV-TARVVFVFGPDKKLKLSILY 149 (224)
T ss_dssp SSCHHHHHHHHHHHHHHTTSCCCSCC--SSCEEECTTCHHHHHTTSSCSCTTCSSSCCT-TCCEEEEECTTSBEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHhhCcccccCc--CcceeecCchHHHHHhCCCCcccccCCCccc-cceEEEEECCCCEEEEEEec
Confidence 9999999999987 777 999999999999999999753211 12112 346799999 9999999987
Q ss_pred cCCcceeCCHHHHHhc
Q 038822 146 SGGDFTVSSADDILKS 161 (162)
Q Consensus 146 ~~~~~~~~~~~~il~~ 161 (162)
+.. ..++++++++.
T Consensus 150 ~~~--~gr~~~eil~~ 163 (224)
T 1prx_A 150 PAT--TGRNFDEILRV 163 (224)
T ss_dssp CTT--BCCCHHHHHHH
T ss_pred CCC--CCCCHHHHHHH
Confidence 632 13567777654
No 22
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.98 E-value=4.8e-32 Score=202.38 Aligned_cols=146 Identities=21% Similarity=0.359 Sum_probs=124.7
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCH
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDP 82 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~ 82 (162)
.+.+|+++|+|+++.+. +.+|++++|+++ +||++||+||+++|||+|+.+ ++.|++++++|+++|+ +|++||.|++
T Consensus 47 ~l~vG~~aPdF~l~~~~-d~~G~~vsLsd~-~Gk~vvL~F~~~~~cp~C~~e-l~~l~~l~~~~~~~gv-~vv~Is~D~~ 122 (240)
T 3qpm_A 47 KAKISKPAPQWEGTAVI-NGEFKELKLSDY-RGKYLVFFFYPLDFTFVCPTE-IIAFSDRVHEFRAINT-EVVACSVDSQ 122 (240)
T ss_dssp SCCTTSBCCCCEEEEEE-TTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHH-HHHHHHHHHHHHTTTE-EEEEEESSCH
T ss_pred cCCCCCCCCCcEeeeee-CCCCcEEEHHHh-CCCEEEEEEECCCCCCchHHH-HHHHHHHHHHHHHCCC-EEEEEECCCH
Confidence 57899999999988432 566889999998 999999999988999999998 9999999999999999 9999999999
Q ss_pred HHHHHHHHhC-------CCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCC
Q 038822 83 FVMKAWAKTF-------PKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSS 154 (162)
Q Consensus 83 ~~~~~~~~~~-------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~ 154 (162)
+.+++|.+++ ++ +||+++|+++++++.||+..+. . +. ..|.+|||| +|+|++++.+... ..+.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~--~fp~l~D~~~~v~~~ygv~~~~--~--g~-~~p~~flID~~G~I~~~~~~~~~--~~~~ 193 (240)
T 3qpm_A 123 FTHLAWIITPRKQGGLGPM--KIPLLSDLTHQISKDYGVYLED--Q--GH-TLRGLFIIDEKGVLRQITMNDLP--VGRS 193 (240)
T ss_dssp HHHHHHHHSCGGGTCCCSC--SSCEEECTTSHHHHHTTCEETT--T--TE-ECEEEEEECTTSBEEEEEEECTT--BCCC
T ss_pred HHHHHHHHHHHhhcCCCCC--ceeEEeCchHHHHHHhCCcccc--C--CC-ccceEEEEcCCCeEEEEEecCCC--CCCC
Confidence 9999999987 66 9999999999999999997532 1 22 246699999 9999999988633 2356
Q ss_pred HHHHHhc
Q 038822 155 ADDILKS 161 (162)
Q Consensus 155 ~~~il~~ 161 (162)
++++++.
T Consensus 194 ~~eil~~ 200 (240)
T 3qpm_A 194 VDETLRL 200 (240)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6776654
No 23
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.97 E-value=4.6e-32 Score=200.05 Aligned_cols=148 Identities=19% Similarity=0.298 Sum_probs=122.8
Q ss_pred CCCCCCCCCCCCeeeeeeecCC--CceeEehhhhcCCC-eEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEE
Q 038822 1 MAPIAVGDPLPDGTLVYFDEQD--QLQQVSVHSLAAGK-KVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCI 77 (162)
Q Consensus 1 m~~l~~G~~~P~f~l~~~~~~~--~g~~~~l~~~~~gk-~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~i 77 (162)
|. +.+|+++|+|+++ +. +| +++|+++ +|+ |+||+|||++|||+|+.| ++.|++++++|+++|+ +|++|
T Consensus 1 m~-l~iG~~aP~F~l~----~~~~~G-~v~l~d~-~Gk~~vvL~f~~a~~cp~C~~e-l~~l~~l~~~f~~~~v-~vi~v 71 (220)
T 1xcc_A 1 MG-YHLGATFPNFTAK----ASGIDG-DFELYKY-IENSWAILFSHPNDFTPVCTTE-LAELGKMHEDFLKLNC-KLIGF 71 (220)
T ss_dssp -C-CCTTCBCCCCEEC----BTTCSS-CEEHHHH-TTTSEEEEECCSCTTCHHHHHH-HHHHHHTHHHHHTTTE-EEEEE
T ss_pred CC-CCCCCCCCCcEee----cccCCC-cEeHHHH-cCCCeEEEEEECCCCCCCCHHH-HHHHHHHHHHHHHcCC-EEEEE
Confidence 54 8999999999999 77 88 9999998 787 899999999999999998 9999999999999999 99999
Q ss_pred EcCCHHHHHHHHH-------hCCCCCceEEEEcCCchHHHHcCCccccccCCCC-ccceeEEEEEc-CCeEEEEEeecCC
Q 038822 78 SVNDPFVMKAWAK-------TFPKNKSVKFLADGSAKYTHALGLELDLSEKGLG-TQSRRFALLVD-DLKVKAANVESGG 148 (162)
Q Consensus 78 s~d~~~~~~~~~~-------~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~-~~~~~~~~ii~-~g~i~~~~~~~~~ 148 (162)
|.|+.+.+++|.+ ++++ +||+++|+++++++.||+..+....+.+ ..+.|.+|||| +|+|++++.++..
T Consensus 72 S~D~~~~~~~~~~~i~~~~~~~~~--~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~ 149 (220)
T 1xcc_A 72 SCNSKESHDKWIEDIKYYGKLNKW--EIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPAT 149 (220)
T ss_dssp ESSCHHHHHHHHHHHHHHHTCSCC--CCCEEECTTSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTT
T ss_pred eCCCHHHHHHHHHHHHHHhcCCCC--cceeEECchhHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEEecCCC
Confidence 9999999999988 4666 9999999999999999997532111112 12357799999 9999999987632
Q ss_pred cceeCCHHHHHhc
Q 038822 149 DFTVSSADDILKS 161 (162)
Q Consensus 149 ~~~~~~~~~il~~ 161 (162)
..++++++++.
T Consensus 150 --~g~~~~ell~~ 160 (220)
T 1xcc_A 150 --TGRNAHEILRV 160 (220)
T ss_dssp --BCCCHHHHHHH
T ss_pred --CCCCHHHHHHH
Confidence 13566666653
No 24
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.1e-31 Score=196.83 Aligned_cols=146 Identities=21% Similarity=0.317 Sum_probs=121.6
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCH
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDP 82 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~ 82 (162)
.+.+|+++|+|+++.+. +.+|++++|+++ +||++||+|||++|||+|+.+ ++.|++++++|+++++ +|++||.|++
T Consensus 18 ~~~~G~~aP~f~l~~~~-~~~g~~v~l~d~-~Gk~vvl~F~pat~C~~C~~e-~~~l~~l~~~~~~~~v-~vv~Is~D~~ 93 (211)
T 2pn8_A 18 LYFQSMPAPYWEGTAVI-DGEFKELKLTDY-RGKYLVFFFYPLDFTFVCPTE-IIAFGDRLEEFRSINT-EVVACSVDSQ 93 (211)
T ss_dssp -CCSSCBCCCCEEEEEE-TTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHH-HHHHHHTHHHHHTTTE-EEEEEESSCH
T ss_pred cCCCCCcCCCeEeeccc-CCCCcEEEHHHh-CCCeEEEEEECCCCCCCCHHH-HHHHHHHHHHHHHCCC-EEEEEECCCH
Confidence 57899999999999221 246799999998 899999999999999999998 9999999999999899 9999999999
Q ss_pred HHHHHHHHhC-------CCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCC
Q 038822 83 FVMKAWAKTF-------PKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSS 154 (162)
Q Consensus 83 ~~~~~~~~~~-------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~ 154 (162)
+.+++|.+++ ++ +||+++|+++++++.||+..+. . +. ..|.+||+| +|+|++.+.+.... .+.
T Consensus 94 ~~~~~~~~~~~~~~g~~~~--~fp~l~D~~~~~~~~ygv~~~~--~--g~-~~p~~~lID~~G~I~~~~~g~~~~--~~~ 164 (211)
T 2pn8_A 94 FTHLAWINTPRRQGGLGPI--RIPLLSDLTHQISKDYGVYLED--S--GH-TLRGLFIIDDKGILRQITLNDLPV--GRS 164 (211)
T ss_dssp HHHHHHHTSCGGGTCCCSC--SSCEEECTTSHHHHHTTCEETT--T--TE-ECEEEEEECTTSBEEEEEEECTTB--CCC
T ss_pred HHHHHHHHHhhhccCccCC--ceEEEECCchHHHHHcCCcccC--C--Cc-ccceEEEECCCCEEEEEEecCCCC--CCC
Confidence 9999999988 66 8999999999999999997431 1 21 246699999 99999999875321 245
Q ss_pred HHHHHhc
Q 038822 155 ADDILKS 161 (162)
Q Consensus 155 ~~~il~~ 161 (162)
++++++.
T Consensus 165 ~~ell~~ 171 (211)
T 2pn8_A 165 VDETLRL 171 (211)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666553
No 25
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.97 E-value=2e-31 Score=191.76 Aligned_cols=140 Identities=21% Similarity=0.289 Sum_probs=119.9
Q ss_pred CCCCCCCCeeeeeeecCC-Cc--eeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCC
Q 038822 5 AVGDPLPDGTLVYFDEQD-QL--QQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVND 81 (162)
Q Consensus 5 ~~G~~~P~f~l~~~~~~~-~g--~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~ 81 (162)
++|+++|+|+++ +. +| ++++|+++ +||++||+||+++|||+|+.+ ++.|++++++|+++++ +|++||.|+
T Consensus 2 ~~G~~aP~f~l~----~~~~G~~~~v~l~~~-~Gk~vvl~F~~~~~Cp~C~~e-~~~l~~~~~~~~~~~v-~vv~Is~d~ 74 (186)
T 1n8j_A 2 LINTKIKPFKNQ----AFKNGEFIEVTEKDT-EGRWSVFFFYPADFTFVSPTE-LGDVADHYEELQKLGV-DVYSVSTDT 74 (186)
T ss_dssp CTTCBCCCCEEE----EEETTEEEEEEHHHH-TTSEEEEEECSCTTCSHHHHH-HHHHHHHHHHHHHTTE-EEEEEESSC
T ss_pred CCCCcCCCcEee----cccCCcceEEEHHHH-CCCeEEEEEECCCCCCccHHH-HHHHHHHHHHHHHCCC-EEEEEECCC
Confidence 689999999999 66 48 89999998 899999999988999999998 9999999999999999 999999999
Q ss_pred HHHHHHHHHhC----CCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHH
Q 038822 82 PFVMKAWAKTF----PKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSAD 156 (162)
Q Consensus 82 ~~~~~~~~~~~----~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~ 156 (162)
++.+++|.+++ ++ +|++++|+++++++.||+.... . +. ..|.+||+| +|+|++.+.+.... .++.+
T Consensus 75 ~~~~~~~~~~~~~~~~~--~fp~l~D~~~~~~~~ygv~~~~--~--g~-~~p~~~lID~~G~i~~~~~~~~~~--~~~~~ 145 (186)
T 1n8j_A 75 HFTHKAWHSSSETIAKI--KYAMIGDPTGALTRNFDNMRED--E--GL-ADRATFVVDPQGIIQAIEVTAEGI--GRDAS 145 (186)
T ss_dssp HHHHHHHHHHCTTGGGC--CSEEEECTTSHHHHHTTCEETT--T--TE-ECEEEEEECTTSBEEEEEEECTTB--CCCHH
T ss_pred HHHHHHHHHHcCcccCC--ceeEEECCchHHHHHhCCccCC--C--Cc-eeeEEEEECCCCeEEEEEecCCCC--CCCHH
Confidence 99999999999 77 9999999999999999997431 1 22 246799999 99999999875321 13455
Q ss_pred HHHh
Q 038822 157 DILK 160 (162)
Q Consensus 157 ~il~ 160 (162)
++++
T Consensus 146 ~l~~ 149 (186)
T 1n8j_A 146 DLLR 149 (186)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 26
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.97 E-value=2.2e-31 Score=193.75 Aligned_cols=147 Identities=27% Similarity=0.330 Sum_probs=125.7
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCH
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDP 82 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~ 82 (162)
.+++|+++|+|+++ +.+|++++|+++ +||++||+||+++|||+|+.+ ++.|+++++++ .++ +|++||.|++
T Consensus 51 ~l~~G~~aPdf~l~----d~~G~~v~L~d~-~Gk~vvl~F~~~~~c~~C~~e-~~~l~~l~~~~--~~v-~vv~Is~D~~ 121 (200)
T 3zrd_A 51 LPQIGDKAKDFTLV----AKDLSDVALSSF-AGKRKVLNIFPSIDTGVCAAS-VRKFNQLAGEL--ENT-VVLCISSDLP 121 (200)
T ss_dssp CCCTTCBCCCCEEE----CTTSCEEEGGGG-TTSEEEEEECSCCCCSCCCHH-HHHHHHHHHTS--TTE-EEEEEESSCH
T ss_pred cCCCCCCCCCeEEE----CCCCCEEcHHHh-CCCcEEEEEECCCCCchhHHH-HHHHHHHHHHh--CCC-EEEEEECCCH
Confidence 58999999999999 999999999998 999999999999999999998 99999999999 688 9999999999
Q ss_pred HHHHHHHHhCCCCCceEEEEcC-CchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHHHh
Q 038822 83 FVMKAWAKTFPKNKSVKFLADG-SAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~D~-~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
+.+++|.+++++ .+|++++|+ ++++++.||+...... ..+. ..|++||+| +|+|++.+++.... +..+++++|+
T Consensus 122 ~~~~~~~~~~~~-~~f~~l~D~~~~~~~~~ygv~~~~~~-~~g~-~~p~~~lID~~G~I~~~~~~~~~~-~~~~~~~~l~ 197 (200)
T 3zrd_A 122 FAQSRFCGAEGL-SNVITLSTLRGADFKQAYGVAITEGP-LAGL-TARAVVVLDGQDNVIYSELVNEIT-TEPNYDAALA 197 (200)
T ss_dssp HHHTTCTTTTTC-TTEEEEETTSCTHHHHHTTCEECSST-TTTS-BCCEEEEECTTSBEEEEEECSBTT-SCCCHHHHHH
T ss_pred HHHHHHHHHcCC-CCceEEecCchHHHHHHhCceeeccc-CCCc-cccEEEEECCCCeEEEEEecCCcc-cCCCHHHHHH
Confidence 999999999875 379999999 9999999999753210 1132 246699999 99999999875221 3578899887
Q ss_pred cC
Q 038822 161 SL 162 (162)
Q Consensus 161 ~l 162 (162)
.|
T Consensus 198 ~L 199 (200)
T 3zrd_A 198 AL 199 (200)
T ss_dssp HH
T ss_pred hh
Confidence 64
No 27
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.97 E-value=1.9e-31 Score=188.31 Aligned_cols=142 Identities=28% Similarity=0.379 Sum_probs=121.3
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCH
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDP 82 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~ 82 (162)
.+++|+++|+|+++ +.+|++++|+++ +||++||+||+++|||+|+.+ ++.|++++++ .++ +|++||.|++
T Consensus 19 ~l~~G~~aP~f~l~----~~~G~~~~l~~~-~Gk~vvl~f~~~~~c~~C~~~-~~~l~~~~~~---~~~-~vv~is~d~~ 88 (166)
T 3p7x_A 19 QINEGDFAPDFTVL----DNDLNQVTLADY-AGKKKLISVVPSIDTGVCDQQ-TRKFNSDASK---EEG-IVLTISADLP 88 (166)
T ss_dssp CCCTTSBCCCCEEE----CTTSCEEEGGGG-TTSCEEEEECSCTTSHHHHHH-HHHHHHHSCT---TTS-EEEEEESSCH
T ss_pred cCCCCCCCCCeEEE----cCCCCEEeHHHh-CCCcEEEEEECCCCCCccHHH-HHHHHHHhhc---CCC-EEEEEECCCH
Confidence 58899999999999 999999999998 999999999999999999998 9999999988 688 9999999999
Q ss_pred HHHHHHHHhCCCCCceEEEEcC-CchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHHHh
Q 038822 83 FVMKAWAKTFPKNKSVKFLADG-SAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~D~-~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
+.+++|.+++++ .+|++++|+ ++++++.||+.... .+. ..|.+||+| +|+|++.+.+.... ...+++++++
T Consensus 89 ~~~~~~~~~~~~-~~~~~l~D~~~~~~~~~~gv~~~~----~g~-~~p~~~liD~~G~i~~~~~~~~~~-~~~~~~~il~ 161 (166)
T 3p7x_A 89 FAQKRWCASAGL-DNVITLSDHRDLSFGENYGVVMEE----LRL-LARAVFVLDADNKVVYKEIVSEGT-DFPDFDAALA 161 (166)
T ss_dssp HHHHHHHHHHTC-SSCEEEECTTTCHHHHHHTCEETT----TTE-ECCEEEEECTTCBEEEEEECSBTT-SCCCHHHHHH
T ss_pred HHHHHHHHHcCC-CceEEccCCchhHHHHHhCCcccc----CCc-eeeEEEEECCCCeEEEEEEcCCcc-cCCCHHHHHH
Confidence 999999999986 259999999 89999999998431 122 246699999 99999998865221 2356677765
Q ss_pred c
Q 038822 161 S 161 (162)
Q Consensus 161 ~ 161 (162)
.
T Consensus 162 ~ 162 (166)
T 3p7x_A 162 A 162 (166)
T ss_dssp H
T ss_pred H
Confidence 4
No 28
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.97 E-value=1.3e-30 Score=191.89 Aligned_cols=143 Identities=15% Similarity=0.154 Sum_probs=118.9
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCC-----cCCHhHHHHhHHHHHhCCCCeEEEE
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCS-----LKHVPGFIEKADELQSKGVDEILCI 77 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~-----~~~~~~l~~~~~~~~~~~~~~v~~i 77 (162)
++++|+++|+|+|+ +.+|++++|+++ +||++||+||++.|||+|. .| ++.|+++ + .|+ +|++|
T Consensus 21 ~l~vG~~APdFtL~----d~~G~~vsLsd~-~Gk~vVL~F~ps~~cp~C~~~~~~~E-l~~~~~~---~--~gv-~VvgI 88 (224)
T 3keb_A 21 FPRKGDYLPSFMLV----DDQKHDAALESF-SHTPKLIVTLLSVDEDEHAGLLLLRE-TRRFLDS---W--PHL-KLIVI 88 (224)
T ss_dssp CCCTTCBCCCCEEE----ETTSCEEEGGGG-TTCCEEEEECSCTTCSTTTSHHHHHH-HHHHHTT---C--TTS-EEEEE
T ss_pred cCCCCCCCCCeEEE----CCCCCEEeHHHh-CCCcEEEEEEeCCCCCCCCCCccHHH-HHHHHHH---c--CCC-EEEEE
Confidence 58999999999999 889999999997 8999999999998899999 87 9998888 4 689 99999
Q ss_pred EcCCHHHHHHHHHhCCCCCceEEEEcC-CchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCH
Q 038822 78 SVNDPFVMKAWAKTFPKNKSVKFLADG-SAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSA 155 (162)
Q Consensus 78 s~d~~~~~~~~~~~~~~~~~~~~l~D~-~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~ 155 (162)
|.|+++.+++|.+++++ .+|++++|+ +++++++||+..+... ..|. ..|++|||| +|+|+|.++..... ...+.
T Consensus 89 S~Ds~~~~~~f~~~~gl-~~fplLsD~~~~~vak~yGv~~~~~~-~~G~-~~p~tfvID~dG~I~~~~~~~~~~-~~pd~ 164 (224)
T 3keb_A 89 TVDSPSSLARARHEHGL-PNIALLSTLRGRDFHKRYGVLITEYP-LSGY-TSPAIILADAANVVHYSERLANTR-DFFDF 164 (224)
T ss_dssp ESSCHHHHHHHHHHHCC-TTCEEEESTTCTTHHHHTTCBCCSTT-STTC-BCCEEEEECTTCBEEEEEECSBTT-CCCCH
T ss_pred ECCCHHHHHHHHHHcCC-CCceEEEcCCchHHHHHhCCcccccc-ccCC-ccCEEEEEcCCCEEEEEEecCCCC-CCCCH
Confidence 99999999999999997 249999999 6999999999853211 1233 246799999 99999999875211 23566
Q ss_pred HHHHhc
Q 038822 156 DDILKS 161 (162)
Q Consensus 156 ~~il~~ 161 (162)
+++++.
T Consensus 165 ~evl~~ 170 (224)
T 3keb_A 165 DAIEKL 170 (224)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776654
No 29
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.97 E-value=2.1e-30 Score=191.10 Aligned_cols=145 Identities=25% Similarity=0.361 Sum_probs=122.4
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCH
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDP 82 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~ 82 (162)
.+.+|+++|+|+++.+. +.+|++++|+++ +||++||+||+++|||+|+.+ ++.|++++++|+++++ +|++||.|+.
T Consensus 26 ~l~~G~~aP~f~l~~~~-~~~g~~v~l~d~-~Gk~vll~F~pa~~Cp~C~~~-~~~l~~l~~~~~~~~v-~vv~Is~D~~ 101 (220)
T 1zye_A 26 APAVTQHAPYFKGTAVV-SGEFKEISLDDF-KGKYLVLFFYPLDFTFVCPTE-IIAFSDKASEFHDVNC-EVVAVSVDSH 101 (220)
T ss_dssp -CCTTSBCCCCEEEEEC-SSSEEEEEGGGG-TTSEEEEEECSCTTCSSSHHH-HHHHHHHHHHHHHTTE-EEEEEESSCH
T ss_pred cccCCCCCCCcEEEeee-CCCCcEEEHHHh-CCCeEEEEEECCCCCCCCHHH-HHHHHHHHHHHHHCCC-EEEEEECCCH
Confidence 47899999999998443 567899999998 899999999999999999998 9999999999999999 9999999999
Q ss_pred HHHHHHHHhC-------CCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCC
Q 038822 83 FVMKAWAKTF-------PKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSS 154 (162)
Q Consensus 83 ~~~~~~~~~~-------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~ 154 (162)
+.+++|.+++ ++ +|++++|+++++++.||+..+. .+. ..|.+||+| +|+|++.+.+.... ...
T Consensus 102 ~~~~~~~~~~~~~~g~~~~--~fp~l~D~~~~i~~~ygv~~~~--~g~---~~P~~~liD~~G~I~~~~~g~~~~--~~~ 172 (220)
T 1zye_A 102 FSHLAWINTPRKNGGLGHM--NIALLSDLTKQISRDYGVLLEG--PGL---ALRGLFIIDPNGVIKHLSVNDLPV--GRS 172 (220)
T ss_dssp HHHHHHHTSCGGGTCCCSC--SSEEEECTTSHHHHHTTCEETT--TTE---ECEEEEEECTTSBEEEEEEECTTC--CCC
T ss_pred HHHHHHHHHHHHhCCCcCC--ceEEEECCcHHHHHHhCCeecC--CCc---ccceEEEECCCCEEEEEEecCCCC--CCC
Confidence 9999999988 66 9999999999999999997531 122 235699998 99999999886221 245
Q ss_pred HHHHHh
Q 038822 155 ADDILK 160 (162)
Q Consensus 155 ~~~il~ 160 (162)
.+++++
T Consensus 173 ~~ell~ 178 (220)
T 1zye_A 173 VEETLR 178 (220)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555554
No 30
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.97 E-value=1.3e-30 Score=188.44 Aligned_cols=143 Identities=22% Similarity=0.418 Sum_probs=121.9
Q ss_pred CCCCCCCCCCCCeeeeeeecCCC-------------c--eeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHH
Q 038822 1 MAPIAVGDPLPDGTLVYFDEQDQ-------------L--QQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADE 65 (162)
Q Consensus 1 m~~l~~G~~~P~f~l~~~~~~~~-------------g--~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~ 65 (162)
|+.+++|+++|+|+++ +.+ | ++++|+++ +||++||+||+++|||+|+.+ ++.|++++++
T Consensus 1 m~~l~~G~~~P~f~l~----~~~~~~~~~~~~~~~~G~~~~v~l~~~-~gk~vvl~F~~a~~C~~C~~~-~~~l~~l~~~ 74 (195)
T 2bmx_A 1 MPLLTIGDQFPAYQLT----ALIGGDLSKVDAKQPGDYFTTITSDEH-PGKWRVVFFWPKDFTFVCPTE-IAAFSKLNDE 74 (195)
T ss_dssp -CBCCTTCBCCCCEEE----EECSSCGGGSCCSSGGGGEEEEETTSS-TTCEEEEEECSCTTSCCCHHH-HHHHHHTHHH
T ss_pred CCcCCCCCcCCCcCcc----cccccccccccccccCCCccEeeHHHh-CCCcEEEEEEcCCCCCCcHHH-HHHHHHHHHH
Confidence 8889999999999999 444 6 89999997 899999999999999999998 9999999999
Q ss_pred HHhCCCCeEEEEEcCCHHHHHHHHHhC----CCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEE
Q 038822 66 LQSKGVDEILCISVNDPFVMKAWAKTF----PKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVK 140 (162)
Q Consensus 66 ~~~~~~~~v~~is~d~~~~~~~~~~~~----~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~ 140 (162)
++++++ +|++|+.|+++.+++|.+++ ++ +|++++|+++.+++.|++... .+.+. |++||+| +|+|+
T Consensus 75 ~~~~~v-~vv~Vs~d~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~v~~~---~g~~~---P~~~lid~~G~i~ 145 (195)
T 2bmx_A 75 FEDRDA-QILGVSIDSEFAHFQWRAQHNDLKTL--PFPMLSDIKRELSQAAGVLNA---DGVAD---RVTFIVDPNNEIQ 145 (195)
T ss_dssp HHTTTE-EEEEEESSCHHHHHHHHHHCTTGGGC--CSCEEECTTSHHHHHHTCBCT---TSSBC---EEEEEECTTSBEE
T ss_pred HHHCCC-EEEEEECCCHHHHHHHHHHhccccCC--ceeEEeCCchHHHHHhCCccc---CCCcc---ceEEEEcCCCeEE
Confidence 998899 99999999999999999999 77 999999999999999999753 22233 5699998 99999
Q ss_pred EEEeecCCcceeCCHHHHHh
Q 038822 141 AANVESGGDFTVSSADDILK 160 (162)
Q Consensus 141 ~~~~~~~~~~~~~~~~~il~ 160 (162)
+.+.+.... ....+++++
T Consensus 146 ~~~~g~~~~--~~~~~~l~~ 163 (195)
T 2bmx_A 146 FVSATAGSV--GRNVDEVLR 163 (195)
T ss_dssp EEEEECTTC--CCCHHHHHH
T ss_pred EEEecCCCC--CCCHHHHHH
Confidence 999886321 134555544
No 31
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.97 E-value=7e-31 Score=192.81 Aligned_cols=142 Identities=25% Similarity=0.304 Sum_probs=122.0
Q ss_pred CCCCCCCCCCeeeeeeecCC--Cc--eeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEE
Q 038822 3 PIAVGDPLPDGTLVYFDEQD--QL--QQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCIS 78 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~--~g--~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is 78 (162)
++.+|+++|+|+++ +. +| ++++|+++++||++||+||+++|||+|+.+ ++.|++++++|++.++ +|++||
T Consensus 20 ~l~~G~~aP~f~l~----~~~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~-~~~l~~l~~~~~~~~v-~vv~Is 93 (213)
T 2i81_A 20 PTYVGKEAPFFKAE----AVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSE-IIALDKALDAFHERNV-ELLGCS 93 (213)
T ss_dssp CCCBTSBCCCCEEE----EECTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHH-HHHHHHTHHHHHHTTE-EEEEEE
T ss_pred cccCCCcCCCeEee----ccccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHH-HHHHHHHHHHHHHCCC-EEEEEe
Confidence 57899999999999 66 78 899999965899999999999999999998 9999999999999999 999999
Q ss_pred cCCHHHHHHHHHhC-------CCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcc
Q 038822 79 VNDPFVMKAWAKTF-------PKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDF 150 (162)
Q Consensus 79 ~d~~~~~~~~~~~~-------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~ 150 (162)
.|+++.+++|.+++ ++ +||+++|++++++++||+..+ .+ . ..|.+||+| +|+|++.+.+....
T Consensus 94 ~D~~~~~~~~~~~~~~~~g~~~~--~fp~l~D~~~~~~~~ygv~~~---~g--~-~~p~~~lID~~G~i~~~~~~~~~~- 164 (213)
T 2i81_A 94 VDSKYTHLAWKKTPLAKGGIGNI--KHTLLSDITKSISKDYNVLFD---DS--V-SLRAFVLIDMNGIVQHLLVNNLAI- 164 (213)
T ss_dssp SSCHHHHHHHHSSCGGGTCCCSC--SSEEEECTTSHHHHHTTCEET---TT--E-ECEEEEEECTTSBEEEEEEECTTC-
T ss_pred CCCHHHHHHHHHHHHhhCCccCC--CceEEECCchHHHHHhCCccc---cC--C-cccEEEEECCCCEEEEEEecCCCC-
Confidence 99999999999988 66 999999999999999999751 12 2 245699999 99999999875321
Q ss_pred eeCCHHHHHh
Q 038822 151 TVSSADDILK 160 (162)
Q Consensus 151 ~~~~~~~il~ 160 (162)
.++.+++++
T Consensus 165 -~~~~~ell~ 173 (213)
T 2i81_A 165 -GRSVDEILR 173 (213)
T ss_dssp -CCCHHHHHH
T ss_pred -CCCHHHHHH
Confidence 245555554
No 32
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.97 E-value=5e-31 Score=185.60 Aligned_cols=143 Identities=22% Similarity=0.301 Sum_probs=121.0
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCH
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDP 82 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~ 82 (162)
.+++|+++|+|+++ +.+|++++|+++ +||++||+||+++|||+|+.+ ++.|+++++++ .++ +|++||.|++
T Consensus 15 ~~~~G~~~P~f~l~----~~~G~~v~l~~~-~gk~vvl~F~~~~~c~~C~~~-~~~l~~~~~~~--~~v-~vv~is~d~~ 85 (163)
T 1psq_A 15 QLQVGDKALDFSLT----TTDLSKKSLADF-DGKKKVLSVVPSIDTGICSTQ-TRRFNEELAGL--DNT-VVLTVSMDLP 85 (163)
T ss_dssp CCCTTSBCCCCEEE----CTTSCEEEGGGG-TTSEEEEEECSCTTSHHHHHH-HHHHHHHTTTC--TTE-EEEEEESSCH
T ss_pred CCCCCCCCCCEEEE----cCCCcEeeHHHh-CCCEEEEEEECCCCCCccHHH-HHHHHHHHHHc--CCc-EEEEEECCCH
Confidence 47899999999999 899999999998 999999999988999999998 99999999999 688 9999999999
Q ss_pred HHHHHHHHhCCCCCceEEEEc-CCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHHHh
Q 038822 83 FVMKAWAKTFPKNKSVKFLAD-GSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~D-~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
+.+++|.+++++. +|++++| +++++++.||+.... .+.+ .|.+||+| +|+|++.+.+.... ...+++++++
T Consensus 86 ~~~~~~~~~~~~~-~~~~l~D~~~~~~~~~~gv~~~~----~g~~-~p~~~liD~~G~i~~~~~g~~~~-~~~~~~~~l~ 158 (163)
T 1psq_A 86 FAQKRWCGAEGLD-NAIMLSDYFDHSFGRDYALLINE----WHLL-ARAVFVLDTDNTIRYVEYVDNIN-SEPNFEAAIA 158 (163)
T ss_dssp HHHHHHHHHHTCT-TSEEEECTTTCHHHHHHTCBCTT----TCSB-CCEEEEECTTCBEEEEEECSBTT-SCCCHHHHHH
T ss_pred HHHHHHHHhcCCC-CcEEecCCchhHHHHHhCCcccc----CCce-EEEEEEEcCCCeEEEEEecCCcC-CCCCHHHHHH
Confidence 9999999998752 6999999 899999999997431 1221 35699999 99999999975221 2355666665
Q ss_pred c
Q 038822 161 S 161 (162)
Q Consensus 161 ~ 161 (162)
.
T Consensus 159 ~ 159 (163)
T 1psq_A 159 A 159 (163)
T ss_dssp H
T ss_pred H
Confidence 3
No 33
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.97 E-value=8.1e-31 Score=190.63 Aligned_cols=143 Identities=22% Similarity=0.335 Sum_probs=122.1
Q ss_pred CCCCCCCCCCCeeeeeeecCC--Cc--eeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEE
Q 038822 2 APIAVGDPLPDGTLVYFDEQD--QL--QQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCI 77 (162)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~~--~g--~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~i 77 (162)
.++.+|+++|+|+++ +. +| ++++|+++ +||++||+||+++|||+|+.+ ++.|+++++++++.++ +|++|
T Consensus 4 ~~~~~G~~aP~f~l~----~~~~~g~~~~v~l~~~-~gk~vvl~F~~~~~C~~C~~~-~~~l~~l~~~~~~~~v-~vi~I 76 (202)
T 1uul_A 4 GEAEDLHPAPDFNET----ALMPNGTFKKVALTSY-KGKWLVLFFYPMDFTFVCPTE-ICQFSDRVKEFSDIGC-EVLAC 76 (202)
T ss_dssp CCCCTTSBCCCCEEE----EECTTSCEEEEEGGGG-TTSEEEEEECSCTTCSHHHHH-HHHHHHTHHHHHTTTE-EEEEE
T ss_pred ccccCCCcCCCcEee----eeecCCCccEEEHHHh-CCCeEEEEEECCCCCCcCHHH-HHHHHHHHHHHHHCCC-EEEEE
Confidence 368999999999999 54 56 89999998 899999999999999999998 9999999999998899 99999
Q ss_pred EcCCHHHHHHHHHhC-------CCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCc
Q 038822 78 SVNDPFVMKAWAKTF-------PKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGD 149 (162)
Q Consensus 78 s~d~~~~~~~~~~~~-------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~ 149 (162)
|.|+.+.+++|.+++ ++ +|++++|+++++++.||+.... .+. ..|.+||+| +|+|++.+.+....
T Consensus 77 s~D~~~~~~~~~~~~~~~~~~~~~--~~p~l~D~~~~~~~~ygv~~~~--~g~---~~P~~~lid~~G~i~~~~~g~~~~ 149 (202)
T 1uul_A 77 SMDSEYSHLAWTSIERKRGGLGQM--NIPILADKTKCIMKSYGVLKEE--DGV---AYRGLFIIDPKQNLRQITVNDLPV 149 (202)
T ss_dssp ESSCHHHHHHHHHSCGGGTCCCSC--SSCEEECTTCHHHHHHTCEETT--TTE---ECEEEEEECTTSBEEEEEEECTTB
T ss_pred eCCCHHHHHHHHHHHHhhCCCCCC--ceeEEECCchHHHHHcCCccCC--CCc---eeeEEEEECCCCEEEEEEeCCCCC
Confidence 999999999999998 66 9999999999999999997432 122 345699999 99999999876321
Q ss_pred ceeCCHHHHHh
Q 038822 150 FTVSSADDILK 160 (162)
Q Consensus 150 ~~~~~~~~il~ 160 (162)
.+..+++++
T Consensus 150 --~~~~~ell~ 158 (202)
T 1uul_A 150 --GRDVDEALR 158 (202)
T ss_dssp --CCCHHHHHH
T ss_pred --CCCHHHHHH
Confidence 245555554
No 34
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.97 E-value=2.1e-30 Score=191.33 Aligned_cols=146 Identities=20% Similarity=0.338 Sum_probs=123.3
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCH
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDP 82 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~ 82 (162)
.+++|+++|+|+++.+. +.+|++++|+++ +||++||+||+++|||+|+.+ ++.|++++++++++++ +|++||.|++
T Consensus 39 ~l~~G~~aP~f~l~~~~-d~~G~~v~l~~~-~Gk~vll~F~a~~wC~~C~~~-~p~l~~l~~~~~~~~v-~vv~Is~D~~ 114 (222)
T 3ztl_A 39 VLLPNRPAPEFKGQAVI-NGEFKEICLKDY-RGKYVVLFFYPADFTFVCPTE-IIAFSDQVEEFNSRNC-QVIACSTDSQ 114 (222)
T ss_dssp -CCSSEECCCCEEEEEE-TTEEEEEEGGGG-TTSEEEEEECSCSSCSHHHHH-HHHHHHTHHHHHTTTE-EEEEEESSCH
T ss_pred cccCCCCCCCeEEeccc-CCCCcEEeHHHh-CCCeEEEEEECCCCCCchHHH-HHHHHHHHHHHHHCCC-EEEEEECCCH
Confidence 58999999999998332 346699999998 999999999988999999998 9999999999999999 9999999999
Q ss_pred HHHHHHHHhC-------CCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCC
Q 038822 83 FVMKAWAKTF-------PKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSS 154 (162)
Q Consensus 83 ~~~~~~~~~~-------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~ 154 (162)
+...+|.+.+ ++ +|++++|+++.+++.||+.... .+.. .|.+||+| +|+|++.+.+.... .+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~--~~~~l~D~~~~~~~~ygv~~~~--~g~~---~P~~~lID~~G~I~~~~~g~~~~--~~~ 185 (222)
T 3ztl_A 115 YSHLAWDNLDRKSGGLGHM--KIPLLADRKQEISKAYGVFDEE--DGNA---FRGLFIIDPNGILRQITINDKPV--GRS 185 (222)
T ss_dssp HHHHHHHHSCGGGTSCCSC--SSCEEECSSSHHHHHTTCBCTT--TSSB---CEEEEEECTTSEEEEEEEECTTB--CCC
T ss_pred HHHHHHHHHhhhhcccccc--ceeEEeCCchHHHHHcCCeecC--CCCc---cceEEEECCCCeEEEEEecCCCC--CCC
Confidence 9999999987 77 9999999999999999997532 2222 35699999 99999999986432 345
Q ss_pred HHHHHhc
Q 038822 155 ADDILKS 161 (162)
Q Consensus 155 ~~~il~~ 161 (162)
++++++.
T Consensus 186 ~~~il~~ 192 (222)
T 3ztl_A 186 VDETLRL 192 (222)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777654
No 35
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.97 E-value=2.1e-30 Score=186.92 Aligned_cols=128 Identities=23% Similarity=0.295 Sum_probs=114.6
Q ss_pred CCCCCCCCeeeeeeecCC--Cc--eeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC
Q 038822 5 AVGDPLPDGTLVYFDEQD--QL--QQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN 80 (162)
Q Consensus 5 ~~G~~~P~f~l~~~~~~~--~g--~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d 80 (162)
++|+++|+|+++ +. +| ++++|+++++||++||+||+++|||+|+.+ ++.|++++++++++++ +|++||.|
T Consensus 1 ~~G~~aP~f~l~----~~~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~-~~~l~~~~~~~~~~~v-~vv~Is~d 74 (192)
T 2h01_A 1 AFQGQAPSFKAE----AVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSE-IIALDKALDSFKERNV-ELLGCSVD 74 (192)
T ss_dssp CCSSBCCCCEEE----EECTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHH-HHHHHHTHHHHHHTTE-EEEEEESS
T ss_pred CCCCcCCCcEeE----eeecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHH-HHHHHHHHHHHHHCCC-EEEEEEeC
Confidence 579999999999 66 88 999999965899999999999999999998 9999999999999999 99999999
Q ss_pred CHHHHHHHHHhC-------CCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeec
Q 038822 81 DPFVMKAWAKTF-------PKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVES 146 (162)
Q Consensus 81 ~~~~~~~~~~~~-------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~ 146 (162)
+++.+++|.+++ ++ +|++++|+++++++.||+..+ .+.. .|.+||+| +|+|++.+.+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~--~~~~l~D~~~~~~~~~gv~~~---~g~~---~P~~~liD~~G~i~~~~~g~ 140 (192)
T 2h01_A 75 SKFTHLAWKKTPLSQGGIGNI--KHTLISDISKSIARSYDVLFN---ESVA---LRAFVLIDKQGVVQHLLVNN 140 (192)
T ss_dssp CHHHHHHHHTSCGGGTCCCSC--SSEEEECTTSHHHHHTTCEET---TTEE---CCEEEEECTTSBEEEEEEGG
T ss_pred CHHHHHHHHHhHHhhCCccCC--CcCeEECCcHHHHHHhCCcCc---CCce---eeEEEEEcCCCEEEEEEeCC
Confidence 999999999998 66 999999999999999999741 2222 35699998 99999999875
No 36
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.97 E-value=7.8e-31 Score=183.75 Aligned_cols=129 Identities=22% Similarity=0.366 Sum_probs=112.6
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCC--eEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGK--KVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN 80 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk--~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d 80 (162)
.+++|+++|+|+++ +.+|++++|+++ +|| ++||+||+++|||+|+.+ ++.|+++++++++++ +|++||.|
T Consensus 6 ~~~~G~~~P~f~l~----~~~G~~v~l~~~-~gk~~~vvl~f~~~~~c~~C~~~-~~~l~~~~~~~~~~~--~vv~is~d 77 (159)
T 2a4v_A 6 ELEIGDPIPDLSLL----NEDNDSISLKKI-TENNRVVVFFVYPRASTPGSTRQ-ASGFRDNYQELKEYA--AVFGLSAD 77 (159)
T ss_dssp CCCTTCBCCSCEEE----CTTSCEEEHHHH-HHHCSEEEEEECSSSSSHHHHHH-HHHHHHHHHHHTTTC--EEEEEESC
T ss_pred cCCCCCCCCCeEEE----CCCCCEEeHHHH-hCCCCeEEEEEcCCCCCCCHHHH-HHHHHHHHHHHHhCC--cEEEEeCC
Confidence 58999999999999 899999999998 776 789999999999999998 999999999999876 79999999
Q ss_pred CHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEcCCeEEEEEeec
Q 038822 81 DPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVDDLKVKAANVES 146 (162)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~ 146 (162)
+++.+++|.+++++ +|++++|+++++++.||+...+. . + ..|.+||+.+|+|++.+.+.
T Consensus 78 ~~~~~~~~~~~~~~--~~~~l~D~~~~~~~~~gv~~~p~-~--g--~~~~~~li~~G~i~~~~~g~ 136 (159)
T 2a4v_A 78 SVTSQKKFQSKQNL--PYHLLSDPKREFIGLLGAKKTPL-S--G--SIRSHFIFVDGKLKFKRVKI 136 (159)
T ss_dssp CHHHHHHHHHHHTC--SSEEEECTTCHHHHHHTCBSSSS-S--C--BCCEEEEEETTEEEEEEESC
T ss_pred CHHHHHHHHHHhCC--CceEEECCccHHHHHhCCccccc-C--C--ccceEEEEcCCEEEEEEccC
Confidence 99999999999998 99999999999999999974321 1 1 12334444999999999865
No 37
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.97 E-value=6.7e-30 Score=183.46 Aligned_cols=129 Identities=23% Similarity=0.344 Sum_probs=115.8
Q ss_pred CCCCCCCCCeeeeeeecCCCce----eEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEc
Q 038822 4 IAVGDPLPDGTLVYFDEQDQLQ----QVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISV 79 (162)
Q Consensus 4 l~~G~~~P~f~l~~~~~~~~g~----~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~ 79 (162)
+++|+++|+|+++ +.+|+ +++|+++ +||++||+||+++|||+|+.+ ++.|++++++++++++ +|++||.
T Consensus 1 ~~~G~~~P~f~l~----~~~g~~~~~~~~l~~~-~gk~vvl~F~~a~~C~~C~~~-~~~l~~~~~~~~~~~v-~vv~vs~ 73 (187)
T 1we0_A 1 SLIGTEVQPFRAQ----AFQSGKDFFEVTEADL-KGKWSIVVFYPADFSFVCPTE-LEDVQKEYAELKKLGV-EVYSVST 73 (187)
T ss_dssp CCTTCBCCCCEEE----EECSSSCCEEEETTTT-SSSEEEEEECSCTTCSSCTHH-HHHHHHHHHHHHHTTE-EEEEEES
T ss_pred CCCCCcCCCeEEe----ccCCCccceEecHHHH-CCCCEEEEEECCCCCcchHHH-HHHHHHHHHHHHHcCC-EEEEEEC
Confidence 5789999999999 77788 9999998 899999999999999999997 9999999999998899 9999999
Q ss_pred CCHHHHHHHHHhC----CCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeec
Q 038822 80 NDPFVMKAWAKTF----PKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVES 146 (162)
Q Consensus 80 d~~~~~~~~~~~~----~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~ 146 (162)
|+++.+++|.+++ ++ +|++++|+++++++.||+.... .+. ..|++||+| +|+|++.+.+.
T Consensus 74 d~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~v~~~~--~g~---~~P~~~lid~~G~i~~~~~g~ 138 (187)
T 1we0_A 74 DTHFVHKAWHENSPAVGSI--EYIMIGDPSQTISRQFDVLNEE--TGL---ADRGTFIIDPDGVIQAIEINA 138 (187)
T ss_dssp SCHHHHHHHHHSCHHHHTC--CSEEEECTTCHHHHHTTCEETT--TTE---ECEEEEEECTTSBEEEEEEEC
T ss_pred CCHHHHHHHHHHhccccCC--CceEEECCchHHHHHhCCCcCC--CCc---eeeEEEEECCCCeEEEEEecC
Confidence 9999999999999 78 9999999999999999997431 121 245699998 99999999886
No 38
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.97 E-value=2.8e-30 Score=187.01 Aligned_cols=144 Identities=26% Similarity=0.392 Sum_probs=122.6
Q ss_pred CCCCCCCCCCCeeeeeeecCC-Cc--eeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEE
Q 038822 2 APIAVGDPLPDGTLVYFDEQD-QL--QQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCIS 78 (162)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~~-~g--~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is 78 (162)
..+.+|+++|+|+++ +. +| ++++|+++ +||++||+||+++|||+|+.+ ++.|++++++++++++ +|++||
T Consensus 3 ~~l~~G~~aP~f~l~----~~~~g~~~~v~l~~~-~gk~vvl~F~~a~~C~~C~~~-~~~l~~l~~~~~~~~v-~vv~Is 75 (197)
T 1qmv_A 3 GNARIGKPAPDFKAT----AVVDGAFKEVKLSDY-KGKYVVLFFYPLDFTFVAPTE-IIAFSNRAEDFRKLGC-EVLGVS 75 (197)
T ss_dssp TTBCTTSBCCCCEEE----EEETTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHH-HHHHHHTHHHHHTTTE-EEEEEE
T ss_pred CcccCCCCCCCeEeE----eecCCCccEEEHHHH-CCCeEEEEEECCCCCCCCHHH-HHHHHHHHHHHHHCCC-EEEEEE
Confidence 368999999999999 55 66 99999998 899999999999999999998 9999999999998899 999999
Q ss_pred cCCHHHHHHHHHhC-------CCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcc
Q 038822 79 VNDPFVMKAWAKTF-------PKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDF 150 (162)
Q Consensus 79 ~d~~~~~~~~~~~~-------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~ 150 (162)
.|+.+.+++|++++ ++ +|++++|+++++++.||+.... .+. ..|.+||+| +|+|++.+.+....
T Consensus 76 ~d~~~~~~~~~~~~~~~~~~~~~--~~p~l~D~~~~~~~~~gv~~~~--~~~---~~P~~~lid~~G~i~~~~~g~~~~- 147 (197)
T 1qmv_A 76 VDSQFTHLAWINTPRKEGGLGPL--NIPLLADVTRRLSEDYGVLKTD--EGI---AYRGLFIIDGKGVLRQITVNDLPV- 147 (197)
T ss_dssp SSCHHHHHHHHTSCGGGTCCCSC--SSCEEECTTCHHHHHTTCEETT--TTE---ECEEEEEECTTSBEEEEEEECTTB-
T ss_pred CCCHHHHHHHHHHHHhhCCCCCC--ceEEEECCcHHHHHHcCCccCC--CCc---eeeEEEEECCCCcEEEEEeCCCCC-
Confidence 99999999999988 66 9999999999999999997431 122 235699999 99999999886331
Q ss_pred eeCCHHHHHhc
Q 038822 151 TVSSADDILKS 161 (162)
Q Consensus 151 ~~~~~~~il~~ 161 (162)
.++++++++.
T Consensus 148 -~~~~~e~l~~ 157 (197)
T 1qmv_A 148 -GRSVDEALRL 157 (197)
T ss_dssp -CCCHHHHHHH
T ss_pred -CCCHHHHHHH
Confidence 2556666553
No 39
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.97 E-value=1.5e-30 Score=184.43 Aligned_cols=144 Identities=22% Similarity=0.346 Sum_probs=119.1
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCH
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDP 82 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~ 82 (162)
.+++|+++|+|+++ +.+|++++++++ +||++||+||+++|||+|+.+ ++.|+++++++ .++ +|++||.|++
T Consensus 20 ~l~~g~~~P~f~l~----~~~G~~~~l~~~-~gk~vvl~f~~~~~C~~C~~~-~~~l~~~~~~~--~~v-~vv~Is~d~~ 90 (171)
T 2yzh_A 20 ELKVGDRAPEAVVV----TKDLQEKIVGGA-KDVVQVIITVPSLDTPVCETE-TKKFNEIMAGM--EGV-DVTVVSMDLP 90 (171)
T ss_dssp CCCTTSBCCCEEEE----ETTSCEEEESSC-CSSEEEEEECSCTTSHHHHHH-HHHHHHHTTTC--TTE-EEEEEESSCH
T ss_pred cCCCCCcCCceEEE----CCCCCEeeHHHh-CCCeEEEEEECCCCCCchHHH-HHHHHHHHHHc--CCc-eEEEEeCCCH
Confidence 47899999999999 899999999997 899999999999999999998 99999999999 688 9999999999
Q ss_pred HHHHHHHHhCCCCCceEEEEc-CCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHHHh
Q 038822 83 FVMKAWAKTFPKNKSVKFLAD-GSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~D-~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
+.+++|.+++++. +|++++| +++++ +.||+...... ..+. ..|.+||+| +|+|++.+.+.... ...+++++++
T Consensus 91 ~~~~~~~~~~~~~-~~~~l~D~~~~~~-~~~gv~~~~~~-~~g~-~~p~~~liD~~G~i~~~~~~~~~~-~~~~~~~ll~ 165 (171)
T 2yzh_A 91 FAQKRFCESFNIQ-NVTVASDFRYRDM-EKYGVLIGEGA-LKGI-LARAVFIIDKEGKVAYVQLVPEIT-EEPNYDEVVN 165 (171)
T ss_dssp HHHHHHHHHTTCC-SSEEEECTTTCGG-GGGTCBBCSST-TTTS-BCCEEEEECTTSBEEEEEECSBTT-SCCCCHHHHH
T ss_pred HHHHHHHHHcCCC-CeEEeecCccCcH-HHhCCEecccc-cCCc-eeeEEEEEcCCCeEEEEEeCCCcC-CCCCHHHHHH
Confidence 9999999999862 6999999 88999 99999753211 0122 235699999 99999999864211 1244555554
No 40
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.97 E-value=4.3e-30 Score=192.44 Aligned_cols=144 Identities=24% Similarity=0.384 Sum_probs=122.2
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEeh-hhhc-CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSV-HSLA-AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN 80 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l-~~~~-~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d 80 (162)
++.+|+++|+|+++ +.+| +++| ++++ +|||+||+||+++|||+|+.+ ++.|++++++|+++|+ +|++||.|
T Consensus 4 ~~~iG~~aPdF~l~----~~~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tE-l~~l~~l~~ef~~~gv-~VI~VS~D 76 (249)
T 3a2v_A 4 IPLIGERFPEMEVT----TDHG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTE-FVSFARRYEDFQRLGV-DLIGLSVD 76 (249)
T ss_dssp ECCTTSBCCCEEEE----ETTE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHH-HHHHHHTHHHHHHTTE-EEEEEESS
T ss_pred cCCCCCCCCCeEEE----cCCC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHH-HHHHHHHHHHHHhCCc-EEEEEECC
Confidence 46899999999999 6777 7999 9975 799999999999999999998 9999999999999999 99999999
Q ss_pred CHHHHHHHHHh------CCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeC
Q 038822 81 DPFVMKAWAKT------FPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVS 153 (162)
Q Consensus 81 ~~~~~~~~~~~------~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~ 153 (162)
+.+.+.+|.+. .++ +||+++|+++++++.||+..+.. +..+.|.+||+| +|+|++...++.. ..+
T Consensus 77 s~~~~~~w~~~~~~~~~~~i--~fPil~D~~~~ia~~ygv~~~~~----g~~~~p~~fIID~dG~I~~~~~~~~~--~gr 148 (249)
T 3a2v_A 77 SVFSHIKWKEWIERHIGVRI--PFPIIADPQGTVARRLGLLHAES----ATHTVRGVFIVDARGVIRTMLYYPME--LGR 148 (249)
T ss_dssp CHHHHHHHHHHHHHHTCCCC--CSCEEECTTSHHHHHHTCCCTTC----SSSCCEEEEEECTTSBEEEEEEECTT--BCC
T ss_pred CHHHHHHHHHHHHHhcCCCC--ceeEEECCchHHHHHhCCccccC----CCcccceEEEECCCCeEEEEEecCCc--ccc
Confidence 99999998885 466 99999999999999999975321 222446799999 9999999998633 235
Q ss_pred CHHHHHhc
Q 038822 154 SADDILKS 161 (162)
Q Consensus 154 ~~~~il~~ 161 (162)
+++++++.
T Consensus 149 ~~~Ellr~ 156 (249)
T 3a2v_A 149 LVDEILRI 156 (249)
T ss_dssp CHHHHHHH
T ss_pred hhHHHHHH
Confidence 66666653
No 41
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.97 E-value=4.2e-30 Score=179.71 Aligned_cols=143 Identities=24% Similarity=0.319 Sum_probs=123.2
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCC-eEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCC
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGK-KVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVND 81 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk-~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~ 81 (162)
++.+|+++|+|++. +.+|++++|+++ +|| ++||+||+++|||+|+.+ ++.|+++++++++.++ +|++|+.|+
T Consensus 8 ~~~~G~~~p~f~l~----~~~G~~~~l~~~-~gk~~vvl~F~~a~~C~~C~~~-~~~l~~~~~~~~~~~~-~vv~is~d~ 80 (160)
T 1xvw_A 8 MLNVGATAPDFTLR----DQNQQLVTLRGY-RGAKNVLLVFFPLAFTGICQGE-LDQLRDHLPEFENDDS-AALAISVGP 80 (160)
T ss_dssp CCCTTSBCCCCEEE----CTTSCEEEGGGG-TTTCEEEEEECSCTTSSHHHHH-HHHHHHTGGGTSSSSE-EEEEEESCC
T ss_pred CCCCCCCCCCeEeE----cCCCCEEeHHHh-cCCCCEEEEEECCCCCCchHHH-HHHHHHHHHHHHHCCc-EEEEEeCCC
Confidence 38999999999999 899999999998 888 899999989999999998 9999999999988889 999999999
Q ss_pred HHHHHHHHHhCCCCCceEEEEcC--CchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHH
Q 038822 82 PFVMKAWAKTFPKNKSVKFLADG--SAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDI 158 (162)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~D~--~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~i 158 (162)
++.+++|.+++++ +|+++.|. ++.+++.||+.... .++| .|.+||+| +|+|++.+.+.... .+.++++
T Consensus 81 ~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~v~~~~----~~~p-~~~~~lid~~G~i~~~~~g~~~~--~~~~~~l 151 (160)
T 1xvw_A 81 PPTHKIWATQSGF--TFPLLSDFWPHGAVSQAYGVFNEQ----AGIA-NRGTFVVDRSGIIRFAEMKQPGE--VRDQRLW 151 (160)
T ss_dssp HHHHHHHHHHHTC--CSCEEECTTTTTHHHHHTTCEETT----TTEE-CSEEEEECTTSBEEEEEECCTTC--CCCHHHH
T ss_pred HHHHHHHHHhcCC--CceEEecCCcChHHHHHcCCcccc----CCCe-eeeEEEECCCCeEEEEEecCCCC--CCCHHHH
Confidence 9999999999998 99999995 89999999997421 1344 23688998 99999999986332 3466666
Q ss_pred Hhc
Q 038822 159 LKS 161 (162)
Q Consensus 159 l~~ 161 (162)
++.
T Consensus 152 ~~~ 154 (160)
T 1xvw_A 152 TDA 154 (160)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 42
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.96 E-value=1.9e-29 Score=182.73 Aligned_cols=129 Identities=23% Similarity=0.362 Sum_probs=115.1
Q ss_pred CCCCCCCCCeeeeeeecCC--Cce---eEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEE
Q 038822 4 IAVGDPLPDGTLVYFDEQD--QLQ---QVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCIS 78 (162)
Q Consensus 4 l~~G~~~P~f~l~~~~~~~--~g~---~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is 78 (162)
+++|+++|+|+++ +. +|+ +++|+++++||++||+||+++|||+|+.+ ++.|++++++++++++ +|++||
T Consensus 1 ~~~G~~~P~f~l~----~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~-~~~l~~l~~~~~~~~v-~vv~Is 74 (198)
T 1zof_A 1 MVVTKLAPDFKAP----AVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTE-IIAFDKRVKDFHEKGF-NVIGVS 74 (198)
T ss_dssp CCTTSBCCCCEEE----EECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTH-HHHHHHTHHHHHHTTE-EEEEEE
T ss_pred CCCCCcCCceEee----cccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHH-HHHHHHHHHHHHHcCC-EEEEEE
Confidence 5789999999999 66 788 99999964899999999999999999998 9999999999999899 999999
Q ss_pred cCCHHHHHHHHHh-------CCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeec
Q 038822 79 VNDPFVMKAWAKT-------FPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVES 146 (162)
Q Consensus 79 ~d~~~~~~~~~~~-------~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~ 146 (162)
.|+++.+++|.++ +++ +|++++|+++.+++.||+..+ .+. ..|.+||+| +|+|++.+.+.
T Consensus 75 ~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~v~~~---~g~---~~P~~~lid~~G~i~~~~~g~ 142 (198)
T 1zof_A 75 IDSEQVHFAWKNTPVEKGGIGQV--SFPMVADITKSISRDYDVLFE---EAI---ALRGAFLIDKNMKVRHAVIND 142 (198)
T ss_dssp SSCHHHHHHHHTSCGGGTCCCCC--SSCEEECTTSHHHHHTTCEET---TTE---ECEEEEEEETTTEEEEEEEES
T ss_pred CCCHHHHHHHHHhhhhcccccCc--eeEEEECCchHHHHHhCCccc---CCc---ccceEEEECCCCEEEEEEecC
Confidence 9999999999999 777 999999999999999999742 122 235699998 99999999875
No 43
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.96 E-value=5.6e-30 Score=198.48 Aligned_cols=130 Identities=17% Similarity=0.165 Sum_probs=112.5
Q ss_pred CCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHH
Q 038822 9 PLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAW 88 (162)
Q Consensus 9 ~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~ 88 (162)
++|+|+|+ +.+|++++|+|| +||++||+|||++|||+|+.| ++.|++. ...++ +|++||.|+++.+++|
T Consensus 3 k~p~F~l~----~~~G~~~~Lsd~-~Gk~vvl~F~p~~~tp~C~~e-~~~~~~~----~~~~~-~v~gis~D~~~~~~~f 71 (322)
T 4eo3_A 3 RVKHFELL----TDEGKTFTHVDL-YGKYTILFFFPKAGTSGSTRE-AVEFSRE----NFEKA-QVVGISRDSVEALKRF 71 (322)
T ss_dssp BCCCCEEE----ETTSCEEEGGGT-TTSEEEEEECSSTTSHHHHHH-HHHHHHS----CCTTE-EEEEEESCCHHHHHHH
T ss_pred CCCCcEEE----CCCcCEEeHHHh-CCCeEEEEEECCCCCCCCHHH-HHHHHHH----hhCCC-EEEEEeCCCHHHHHHH
Confidence 79999999 899999999998 999999999999999999998 9988753 23578 9999999999999999
Q ss_pred HHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 89 AKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 89 ~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
.+++++ +||+++|+++++++.||+... +. +.|++|||| +|+|++++.+.... ..++++|+.
T Consensus 72 ~~~~~l--~fp~l~D~~~~v~~~ygv~~~------~~-~~r~tfiId~~G~i~~~~~~v~~~---~h~~~~l~~ 133 (322)
T 4eo3_A 72 KEKNDL--KVTLLSDPEGILHEFFNVLEN------GK-TVRSTFLIDRWGFVRKEWRRVKVE---GHVQEVKEA 133 (322)
T ss_dssp HHHHTC--CSEEEECTTCHHHHHTTCEET------TE-ECCEEEEECTTSBEEEEEESCCST---THHHHHHHH
T ss_pred HHhhCC--ceEEEEcCchHHHHhcCCCCC------Cc-CccEEEEECCCCEEEEEEeCCCcc---ccHHHHHHH
Confidence 999999 999999999999999999732 22 346799999 99999999875443 566666654
No 44
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.96 E-value=2.4e-28 Score=173.85 Aligned_cols=145 Identities=24% Similarity=0.307 Sum_probs=115.4
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCH
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDP 82 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~ 82 (162)
.+.+|+++|+|+++ +.+|++++++++ +||++||+||++.|||+|+.+ ++.|++++++ .++ +|++|+.|++
T Consensus 17 ~l~~G~~~P~f~l~----~~~G~~v~l~~~-~gk~vvl~F~~t~~C~~C~~~-~~~l~~l~~~---~~v-~vv~Is~D~~ 86 (175)
T 1xvq_A 17 LPAVGSPAPAFTLT----GGDLGVISSDQF-RGKSVLLNIFPSVDTPVCATS-VRTFDERAAA---SGA-TVLCVSKDLP 86 (175)
T ss_dssp CCCTTSBCCCCEEE----CTTSCEEEGGGG-TTSCEEEEECSCCCSSCCCHH-HHHHHHHHHH---TTC-EEEEEESSCH
T ss_pred CCCcCCcCCCeEEE----CCCCCEEeHHHc-CCCEEEEEEEeCCCCchHHHH-HHHHHHHHhh---cCC-EEEEEECCCH
Confidence 47899999999999 899999999998 999999999965559999998 9999999988 678 9999999999
Q ss_pred HHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 83 FVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+..++|.+++++ .+|++++|+++.+++.||+...... ..+. ..|.+||+| +|+|++.+.+.... ..++++++|+.
T Consensus 87 ~~~~~~~~~~~~-~~~~~l~D~~~~~~~~~gv~~~~~~-~~g~-~~p~~~lid~~G~I~~~~~g~~~~-~~~~~~~~l~~ 162 (175)
T 1xvq_A 87 FAQKRFCGAEGT-ENVMPASAFRDSFGEDYGVTIADGP-MAGL-LARAIVVIGADGNVAYTELVPEIA-QEPNYEAALAA 162 (175)
T ss_dssp HHHTTCC-------CEEEEECTTSSHHHHTTCBBCSST-TTTS-BCSEEEEECTTSBEEEEEECSBTT-CCCCHHHHHHH
T ss_pred HHHHHHHHHcCC-CCceEeeCCHHHHHHHhCCcccccc-cCCc-ccceEEEECCCCeEEEEEECCCcC-CCCCHHHHHHH
Confidence 999999999885 2699999999999999999743211 1122 235699999 99999999853211 24688888875
No 45
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.96 E-value=7.9e-29 Score=182.25 Aligned_cols=138 Identities=15% Similarity=0.160 Sum_probs=117.9
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCe-EEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEc--
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKK-VILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISV-- 79 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~-vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~-- 79 (162)
.+++|+++|+|+++ +.+|++++|+++ +||+ +||+|| ++|||+|+.+ ++.|++++++++++++ +|++|+.
T Consensus 31 ~l~~G~~aP~f~l~----~~~G~~v~l~~~-~gk~~vll~F~-a~~C~~C~~~-~~~l~~l~~~~~~~~v-~vv~Vs~d~ 102 (218)
T 3u5r_E 31 SITLGTRAADFVLP----DAGGNLFTLAEF-KDSPALLVAFI-SNRCPFVVLI-REALAKFAGDYAGQGL-AVVAINSND 102 (218)
T ss_dssp CCCTTCBCCCCCEE----CTTCCEECGGGG-TTCSEEEEEEC-CSSCHHHHTT-HHHHHHHHHHHTTTTE-EEEEEECSC
T ss_pred cCCCCCcCCCcEeE----CCCCCEEeHHHh-CCCCeEEEEEE-CCCCccHHHH-HHHHHHHHHHHHhCCc-EEEEEECCc
Confidence 58999999999999 899999999997 8997 667776 7999999998 9999999999999899 9999999
Q ss_pred ------CCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecC-----
Q 038822 80 ------NDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESG----- 147 (162)
Q Consensus 80 ------d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~----- 147 (162)
++++.+++|.+++++ +|+++.|.++.+++.|++. ++| .+||+| +|+|+|....+.
T Consensus 103 ~~~~~~d~~~~~~~~~~~~~~--~~~~l~D~~~~~~~~~~v~--------~~P---~~~liD~~G~i~~~g~~d~~~~~~ 169 (218)
T 3u5r_E 103 AQAFPEETLERVGAEVKAYGY--GFPYLKDASQSVAKAYGAA--------CTP---DFFLYDRERRLVYHGQFDDARPGN 169 (218)
T ss_dssp TTTCGGGSHHHHHHHHHHHTC--CSCEEECTTCHHHHHHTCC--------EES---EEEEECTTCBEEEEECSSSCCTTS
T ss_pred ccccccCCHHHHHHHHHHhCC--CccEEECCccHHHHHcCCC--------CCC---eEEEECCCCcEEEecccccccccc
Confidence 789999999999999 9999999999999999997 344 599998 999998765321
Q ss_pred -CcceeCCHHHHHhc
Q 038822 148 -GDFTVSSADDILKS 161 (162)
Q Consensus 148 -~~~~~~~~~~il~~ 161 (162)
+..+.+++++.|++
T Consensus 170 ~~~~~~~~l~~~i~~ 184 (218)
T 3u5r_E 170 GKDVTGADLRAAVDA 184 (218)
T ss_dssp CCCCCCHHHHHHHHH
T ss_pred ccccCHHHHHHHHHH
Confidence 12233555555543
No 46
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.96 E-value=4.6e-28 Score=167.57 Aligned_cols=137 Identities=17% Similarity=0.248 Sum_probs=119.2
Q ss_pred CCCCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC
Q 038822 1 MAPIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN 80 (162)
Q Consensus 1 m~~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d 80 (162)
|+ +++|+++|+|+++ + +|+.++++++ +||++||+|| ++|||.|..+ ++.|.++++++++.++ .+++|+.+
T Consensus 1 m~-l~~G~~~P~f~l~----~-~g~~~~l~~~-~gk~vll~f~-~~~C~~C~~~-~~~l~~l~~~~~~~~~-~~v~v~~d 70 (152)
T 3gl3_A 1 MS-LDKGDKAPDFALP----G-KTGVVKLSDK-TGSVVYLDFW-ASWCGPCRQS-FPWMNQMQAKYKAKGF-QVVAVNLD 70 (152)
T ss_dssp -C-CCTTSBCCCCEEE----B-SSSEEEGGGG-TTSEEEEEEE-CTTCTHHHHH-HHHHHHHHHHHGGGTE-EEEEEECC
T ss_pred CC-CCCCCcCCceEee----C-CCCeEeHHHh-CCCEEEEEEE-CCcCHHHHHH-HHHHHHHHHHhhcCCe-EEEEEECC
Confidence 44 8999999999999 8 9999999997 8999988888 9999999997 9999999999999899 99999987
Q ss_pred -CHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHH
Q 038822 81 -DPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDI 158 (162)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~i 158 (162)
+.+..++|.+++++ +|+++.|+++.+++.|++. ++|+ ++|+| +|+|++.+.+.... +.+++++.
T Consensus 71 ~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~v~--------~~P~---~~lid~~G~i~~~~~g~~~~-~~~~l~~~ 136 (152)
T 3gl3_A 71 AKTGDAMKFLAQVPA--EFTVAFDPKGQTPRLYGVK--------GMPT---SFLIDRNGKVLLQHVGFRPA-DKEALEQQ 136 (152)
T ss_dssp SSHHHHHHHHHHSCC--CSEEEECTTCHHHHHTTCC--------SSSE---EEEECTTSBEEEEEESCCTT-THHHHHHH
T ss_pred CCHHHHHHHHHHcCC--CCceeECCcchhHHHcCCC--------CCCe---EEEECCCCCEEEEEccCCCc-CHHHHHHH
Confidence 67889999999998 9999999999999999997 5554 89998 99999999875332 23455655
Q ss_pred Hhc
Q 038822 159 LKS 161 (162)
Q Consensus 159 l~~ 161 (162)
|++
T Consensus 137 i~~ 139 (152)
T 3gl3_A 137 ILA 139 (152)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 47
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.95 E-value=1.3e-27 Score=168.90 Aligned_cols=135 Identities=20% Similarity=0.174 Sum_probs=113.0
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCC-CCCcCCHhHHHHhHHHHHhCC--CCeEEEEEc
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTP-TCSLKHVPGFIEKADELQSKG--VDEILCISV 79 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp-~C~~~~~~~l~~~~~~~~~~~--~~~v~~is~ 79 (162)
.+++|+++|+|+++ +.+|++++|+++ +||++||+|| ++||| +|+.+ ++.|.++++++++.+ + +|++||.
T Consensus 6 ~l~~g~~~p~f~l~----~~~G~~~~l~~~-~gk~vll~f~-~~~C~~~C~~~-~~~l~~l~~~~~~~~~~~-~vv~is~ 77 (174)
T 1xzo_A 6 KDPLNYEVEPFTFQ----NQDGKNVSLESL-KGEVWLADFI-FTNCETICPPM-TAHMTDLQKKLKAENIDV-RIISFSV 77 (174)
T ss_dssp CSCCCEECCCCEEE----CTTSCEEETGGG-TTCCEEEEEE-CSCCSSCCCSH-HHHHHHHHHHHHHTTCCC-EEEEEES
T ss_pred cCccccccCCcEEE----cCCCCEEehhhc-CCCEEEEEEE-cCCCcchhHHH-HHHHHHHHHHhhhcCCcE-EEEEEEe
Confidence 58899999999999 899999999997 9999999999 89999 99998 999999999999876 9 9999998
Q ss_pred C----CHHHHHHHHHhCCCCCce---EEEEcCCchHHHHcCC-----ccccccCCCCccceeEEEEEc-CCeEEEEEeec
Q 038822 80 N----DPFVMKAWAKTFPKNKSV---KFLADGSAKYTHALGL-----ELDLSEKGLGTQSRRFALLVD-DLKVKAANVES 146 (162)
Q Consensus 80 d----~~~~~~~~~~~~~~~~~~---~~l~D~~~~~~~~~gv-----~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~ 146 (162)
| +++.+++|.+++++ +| +++.|+++++.+.|++ ........++....|.+||+| +|+|++.+.+.
T Consensus 78 d~~~d~~~~~~~~~~~~~~--~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~ 155 (174)
T 1xzo_A 78 DPENDKPKQLKKFAANYPL--SFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGV 155 (174)
T ss_dssp CTTTCCHHHHHHHHTTSCC--CGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESS
T ss_pred CCCCCCHHHHHHHHHHcCC--CCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCC
Confidence 6 78999999999998 77 9999999888877764 111111112333345689999 99999999875
Q ss_pred C
Q 038822 147 G 147 (162)
Q Consensus 147 ~ 147 (162)
.
T Consensus 156 ~ 156 (174)
T 1xzo_A 156 E 156 (174)
T ss_dssp S
T ss_pred C
Confidence 3
No 48
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.95 E-value=5.7e-28 Score=165.46 Aligned_cols=130 Identities=15% Similarity=0.114 Sum_probs=114.0
Q ss_pred CCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHH---hHHHHHhCCCCeEEEEEcC-
Q 038822 5 AVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIE---KADELQSKGVDEILCISVN- 80 (162)
Q Consensus 5 ~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~---~~~~~~~~~~~~v~~is~d- 80 (162)
++|+++|+|+++ +.+|++++|+++ +||++||+|| ++|||.|+.+ ++.+.+ +++++++.++ .+++|+.|
T Consensus 2 ~~G~~~p~f~l~----~~~g~~~~l~~~-~gk~vll~F~-a~~C~~C~~~-~~~l~~~~~l~~~~~~~~~-~~v~v~~d~ 73 (142)
T 3ewl_A 2 NAGMKAADFTYV----TVHGDNSRMSRL-KAQYTMLFFY-DPDCSNCRKF-EKLFAEIPAFVEMVENGTL-RVLAIYPDE 73 (142)
T ss_dssp CTTSBCCCCEEE----CTTCCEEEGGGC-CCSEEEEEEC-CSSCHHHHHH-HHHHHTCHHHHHHHHHTSE-EEEEEECSS
T ss_pred CCCCcCCCCEEE----CCCCCEEEhhhc-CCCEEEEEEE-CCCCccHHHH-HHHHHHhHHHHHHhccCCe-EEEEEEecC
Confidence 689999999999 899999999997 8999999888 9999999998 999998 9999998899 99999997
Q ss_pred CHHHHHHHHHhCCCCCceEEEEcCCchHHH--HcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHH
Q 038822 81 DPFVMKAWAKTFPKNKSVKFLADGSAKYTH--ALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADD 157 (162)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~--~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~ 157 (162)
+.+..++|.+++++ +|+++.|.++.+.. .|++. ++|+ ++++| +|+|++.. ...+++++
T Consensus 74 ~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~v~--------~~P~---~~lid~~G~i~~~~------~~~~~l~~ 134 (142)
T 3ewl_A 74 NREEWATKAVYMPQ--GWIVGWNKAGDIRTRQLYDIR--------ATPT---IYLLDGRKRVILKD------TSMEQLID 134 (142)
T ss_dssp CHHHHHHHHTTSCT--TCEEEECTTCHHHHTTCSCCC--------SSSE---EEEECTTCBEEECS------CCHHHHHH
T ss_pred CHHHHHHHHHHcCC--CcceeeCCccchhhHHHcCCC--------CCCe---EEEECCCCCEEecC------CCHHHHHH
Confidence 78889999999998 99999999999977 89986 4554 89998 99999832 12366777
Q ss_pred HHhc
Q 038822 158 ILKS 161 (162)
Q Consensus 158 il~~ 161 (162)
.|++
T Consensus 135 ~l~~ 138 (142)
T 3ewl_A 135 YLAT 138 (142)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 6664
No 49
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.95 E-value=8.2e-28 Score=166.64 Aligned_cols=137 Identities=18% Similarity=0.260 Sum_probs=120.8
Q ss_pred CCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCC--
Q 038822 4 IAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVND-- 81 (162)
Q Consensus 4 l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~-- 81 (162)
+++|+++|+|+++ +.+|+.++++++ +||++||+|| ++|||.|..+ ++.+.++++++++.++ .+++|+.+.
T Consensus 2 ~~~G~~~p~~~l~----~~~g~~~~l~~~-~gk~vll~f~-~~~C~~C~~~-~~~l~~~~~~~~~~~~-~~v~v~~d~~~ 73 (154)
T 3kcm_A 2 SLEENPAPDFTLN----TLNGEVVKLSDL-KGQVVIVNFW-ATWCPPCREE-IPSMMRLNAAMAGKPF-RMLCVSIDEGG 73 (154)
T ss_dssp -CTTSBCCCCEEE----CTTSCEEEGGGG-TTSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTTSSE-EEEEEECCTTH
T ss_pred CCCCCCCCCeEEE----cCCCCEEehhhc-CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHhccCCe-EEEEEEcCCcc
Confidence 5899999999999 899999999997 8999999999 8999999997 9999999999998888 999999986
Q ss_pred HHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHHHh
Q 038822 82 PFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
++..++|.+++++ +|+++.|.+..+++.|++. ++| .++|+| +|+|++.+.+.... +.+++.+.|+
T Consensus 74 ~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~v~--------~~P---~~~lid~~G~i~~~~~g~~~~-~~~~l~~~l~ 139 (154)
T 3kcm_A 74 KVAVEEFFRKTGF--TLPVLLDADKRVGKLYGTT--------GVP---ETFVIDRHGVILKKVVGAMEW-DHPEVIAFLN 139 (154)
T ss_dssp HHHHHHHHHHHCC--CCCEEECTTCHHHHHHTCC--------SBC---EEEEECTTSBEEEEEESCCCT-TSHHHHHHHH
T ss_pred hHHHHHHHHHcCC--CeeEEecCchHHHHHhCCC--------CCC---eEEEECCCCcEEEEEcCCCcc-ccHHHHHHHH
Confidence 8889999999999 9999999999999999997 455 489998 99999999876321 3467777776
Q ss_pred cC
Q 038822 161 SL 162 (162)
Q Consensus 161 ~l 162 (162)
+|
T Consensus 140 ~l 141 (154)
T 3kcm_A 140 NE 141 (154)
T ss_dssp TC
T ss_pred HH
Confidence 54
No 50
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.95 E-value=1.1e-27 Score=166.14 Aligned_cols=122 Identities=19% Similarity=0.152 Sum_probs=111.3
Q ss_pred CCCCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC
Q 038822 1 MAPIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN 80 (162)
Q Consensus 1 m~~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d 80 (162)
|. +++|+++|+|+++ +.+|++++|+++ +||++||+|| ++|||.|+.+ ++.|++++++++++++ .+++|+.|
T Consensus 1 m~-l~~g~~~p~f~l~----~~~G~~~~l~~~-~gk~vll~F~-a~~C~~C~~~-~~~l~~l~~~~~~~~~-~vv~v~~d 71 (152)
T 2lrn_A 1 MS-LATGSVAPAITGI----DLKGNSVSLNDF-KGKYVLVDFW-FAGCSWCRKE-TPYLLKTYNAFKDKGF-TIYGVSTD 71 (152)
T ss_dssp CC-SCTTEECCCCEEE----CSSSCEEESGGG-TTSEEEEEEE-CTTCTTHHHH-HHHHHHHHHHHTTTTE-EEEEEECC
T ss_pred CC-ccCCCcCCCceeE----cCCCCEEeHHHc-CCCEEEEEEE-CCCChhHHHH-HHHHHHHHHHhccCCe-EEEEEEcc
Confidence 55 8999999999999 899999999997 9999999998 8999999998 9999999999998889 99999987
Q ss_pred -CHHHHHHHHHhCCCCCceEEEEcC---CchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEe
Q 038822 81 -DPFVMKAWAKTFPKNKSVKFLADG---SAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANV 144 (162)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~~~l~D~---~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~ 144 (162)
+.+..++|.+++++ +|+++.|+ +..+++.||+. ++| +++|+| +|+|++.+.
T Consensus 72 ~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~v~--------~~P---~~~lid~~G~i~~~~~ 127 (152)
T 2lrn_A 72 RREEDWKKAIEEDKS--YWNQVLLQKDDVKDVLESYCIV--------GFP---HIILVDPEGKIVAKEL 127 (152)
T ss_dssp SCHHHHHHHHHHHTC--CSEEEEECHHHHHHHHHHTTCC--------SSC---EEEEECTTSEEEEECC
T ss_pred CCHHHHHHHHHHhCC--CCeEEecccchhHHHHHHhCCC--------cCC---eEEEECCCCeEEEeeC
Confidence 57889999999998 99999999 78999999987 455 489998 999999974
No 51
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.95 E-value=6.3e-28 Score=169.94 Aligned_cols=142 Identities=25% Similarity=0.366 Sum_probs=116.8
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCH
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDP 82 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~ 82 (162)
.+++|+++|+|+++ +.+|++++|+++ +||++||+||.+.|||+|+.+ ++.|+++++++ .++ ++++|+.|++
T Consensus 17 ~~~~G~~~p~f~l~----~~~G~~~~l~~~-~gk~~vl~F~~~~~C~~C~~~-~~~l~~l~~~~--~~~-~vv~is~d~~ 87 (167)
T 2jsy_A 17 EVKVGDQAPDFTVL----TNSLEEKSLADM-KGKVTIISVIPSIDTGVCDAQ-TRRFNEEAAKL--GDV-NVYTISADLP 87 (167)
T ss_dssp CCCTTSCCCCCEEE----BTTCCEEEHHHH-TTSCEEEEECSCSTTSHHHHT-HHHHHHHHHHH--SSC-EEEEEECSSG
T ss_pred ccCCCCcCCceEEE----CCCCCEeeHHHh-CCCeEEEEEecCCCCCchHHH-HHHHHHHHHHc--CCC-EEEEEECCCH
Confidence 47899999999999 899999999998 899999999944349999998 99999999999 688 9999999999
Q ss_pred HHHHHHHHhCCCCCceEEEEc-CCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHHHh
Q 038822 83 FVMKAWAKTFPKNKSVKFLAD-GSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~D-~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
+..++|.+++++ .+|++++| +++++++.||+.... .+. ..|.+||+| +|+|++.+.+.... ...+++++++
T Consensus 88 ~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~v~~~~----~g~-~~p~~~lid~~G~i~~~~~g~~~~-~~~~~~~l~~ 160 (167)
T 2jsy_A 88 FAQARWCGANGI-DKVETLSDHRDMSFGEAFGVYIKE----LRL-LARSVFVLDENGKVVYAEYVSEAT-NHPNYEKPIE 160 (167)
T ss_dssp GGTSCCGGGSSC-TTEEEEEGGGTCHHHHHTTCBBTT----TCS-BCCEEEEECTTSCEEEEEECSBTT-SCCCSHHHHH
T ss_pred HHHHHHHHhcCC-CCceEeeCCchhHHHHHhCCcccc----CCc-eeeEEEEEcCCCcEEEEEecCCcC-CCCCHHHHHH
Confidence 999999999875 36999999 899999999997421 122 135699999 99999999874211 1234555554
No 52
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.95 E-value=7e-28 Score=166.83 Aligned_cols=122 Identities=15% Similarity=0.100 Sum_probs=111.4
Q ss_pred CCCCCCCCCCCeeeeeeecCCCceeEehh--hhcCCCeEEEEEeeCCCCCC--CCcCCHhHHHHhHHHH-HhCCCCeEEE
Q 038822 2 APIAVGDPLPDGTLVYFDEQDQLQQVSVH--SLAAGKKVILFGVPGDFTPT--CSLKHVPGFIEKADEL-QSKGVDEILC 76 (162)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~~~g~~~~l~--~~~~gk~vvl~f~~~~~cp~--C~~~~~~~l~~~~~~~-~~~~~~~v~~ 76 (162)
+.+++|+++|+|+++ +.+|++++|+ ++ +||++||+|| ++|||. |+.+ ++.|+++++++ +++++ ++++
T Consensus 3 ~~l~~G~~~p~f~l~----~~~g~~~~l~~~~~-~gk~vll~F~-a~~C~~v~C~~~-~~~l~~l~~~~~~~~~~-~~v~ 74 (150)
T 3fw2_A 3 AKSEIGKYAPFFSLP----NAKGEKITRSSDAF-KQKSLLINFW-ASWNDSISQKQS-NSELREIYKKYKKNKYI-GMLG 74 (150)
T ss_dssp CTTSTTSBCCCCCEE----BTTCCEECTTSTTT-TTSEEEEEEE-CTTCCCHHHHHH-HHHHHHHHHHHTTCSSE-EEEE
T ss_pred ccccCCCcCCccEeE----CCCCCEEecchhhh-CCCEEEEEEE-eCCCCchHHHHH-HHHHHHHHHHhccCCCe-EEEE
Confidence 468999999999999 8999999999 97 8999999998 799999 9998 99999999999 88889 9999
Q ss_pred EEcCC-HHHHHHHHHhCCCCCceEEEEcC---CchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEe
Q 038822 77 ISVND-PFVMKAWAKTFPKNKSVKFLADG---SAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANV 144 (162)
Q Consensus 77 is~d~-~~~~~~~~~~~~~~~~~~~l~D~---~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~ 144 (162)
|+.|+ ++..++|.+++++ +|+++.|+ ++.+++.||+. ++| ++||+| +|+|++.+.
T Consensus 75 v~~d~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~v~--------~~P---~~~lid~~G~i~~~~~ 134 (150)
T 3fw2_A 75 ISLDVDKQQWKDAIKRDTL--DWEQVCDFGGLNSEVAKQYSIY--------KIP---ANILLSSDGKILAKNL 134 (150)
T ss_dssp EECCSCHHHHHHHHHHTTC--CSEEECCSCGGGCHHHHHTTCC--------SSS---EEEEECTTSBEEEESC
T ss_pred EEcCCCHHHHHHHHHHhCC--CceEEEcCcccchHHHHHcCCC--------ccC---eEEEECCCCEEEEccC
Confidence 99984 5889999999999 99999998 67999999987 455 499998 999999986
No 53
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.95 E-value=2.9e-27 Score=162.44 Aligned_cols=124 Identities=13% Similarity=0.170 Sum_probs=112.5
Q ss_pred CCCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC-
Q 038822 2 APIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN- 80 (162)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d- 80 (162)
+.+.+|+++|+|+++ +.+|++++++++ +||++||.|| ++|||.|..+ ++.++++++++++.++ .+++|+.|
T Consensus 3 ~~~~~G~~~p~~~l~----~~~g~~~~l~~~-~gk~vll~f~-~~~C~~C~~~-~~~l~~l~~~~~~~~~-~~v~v~~d~ 74 (148)
T 3hcz_A 3 APLLLGKKAPNLYMT----DTTGTYRYLYDV-QAKYTILFFW-DSQCGHCQQE-TPKLYDWWLKNRAKGI-QVYAANIER 74 (148)
T ss_dssp CCCCTTSBCCCCCCB----CTTSCBCCGGGC-CCSEEEEEEE-CGGGCTTCSH-HHHHHHHHHHHGGGTE-EEEEEECCS
T ss_pred CccCCCCcCCceEEe----cCCCCEEEhHHc-CCCEEEEEEE-CCCCccHHHH-HHHHHHHHHHhccCCE-EEEEEEecC
Confidence 368999999999999 899999999997 9999988888 8999999997 9999999999998889 99999997
Q ss_pred CHHHHHHHHHhCCCCCc-eEEEEcCCch--HHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeec
Q 038822 81 DPFVMKAWAKTFPKNKS-VKFLADGSAK--YTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVES 146 (162)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~~~l~D~~~~--~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~ 146 (162)
+.+..++|.+++++ + |+++.|+++. +++.|++. ++| +++|+| +|+|++.+.+.
T Consensus 75 ~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~i~--------~~P---~~~lid~~G~i~~~~~g~ 131 (148)
T 3hcz_A 75 KDEEWLKFIRSKKI--GGWLNVRDSKNHTDFKITYDIY--------ATP---VLYVLDKNKVIIAKRIGY 131 (148)
T ss_dssp SSHHHHHHHHHHTC--TTSEEEECTTCCCCHHHHHCCC--------SSC---EEEEECTTCBEEEESCCG
T ss_pred CHHHHHHHHHHcCC--CCceEEeccccchhHHHhcCcC--------CCC---EEEEECCCCcEEEecCCH
Confidence 67889999999998 7 9999999988 99999997 455 489998 99999988643
No 54
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.95 E-value=1e-27 Score=166.91 Aligned_cols=132 Identities=17% Similarity=0.280 Sum_probs=113.9
Q ss_pred CCCCCCCCeeeeeeecC--CCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCC-HhHHHHhHHHHHhCCCCeEEEEEc--
Q 038822 5 AVGDPLPDGTLVYFDEQ--DQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKH-VPGFIEKADELQSKGVDEILCISV-- 79 (162)
Q Consensus 5 ~~G~~~P~f~l~~~~~~--~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~-~~~l~~~~~~~~~~~~~~v~~is~-- 79 (162)
.+|+++|+|+++ + .+|++++|+++ +||++||.|| ++|||+|.. + ++.|+++++++++.++ .+++|+.
T Consensus 1 s~g~~aP~f~l~----~~~~~g~~~~l~~~-~gk~vlv~f~-a~wC~~C~~-~~~~~l~~l~~~~~~~~v-~~v~v~~~~ 72 (158)
T 3eyt_A 1 SNAMKAPELQIQ----QWFNSATDLTLADL-RGKVIVIEAF-QMLCPGCVM-HGIPLAQKVRAAFPEDKV-AVLGLHTVF 72 (158)
T ss_dssp CCCEECCCCCEE----EEESCSSCCCTGGG-TTSEEEEEEE-CTTCHHHHH-THHHHHHHHHHHSCTTTE-EEEEEECCC
T ss_pred CCCCcCCCceeh----hhhcCCCccCHHHh-CCCEEEEEEE-CCcCcchhh-hhhHHHHHHHHHhCcCCE-EEEEEEecc
Confidence 368999999999 5 47899999998 8999999998 799999999 4 8999999999998889 9999995
Q ss_pred -----CCHHHHHHHHHhCCCCCceEEEEcCCc-----hHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCC
Q 038822 80 -----NDPFVMKAWAKTFPKNKSVKFLADGSA-----KYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGG 148 (162)
Q Consensus 80 -----d~~~~~~~~~~~~~~~~~~~~l~D~~~-----~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~ 148 (162)
++.+..++|.+++++ +|+++.|.++ .+++.||+. ++|+ +||+| +|+|++.+.+...
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~v~--------~~P~---~~lid~~G~i~~~~~g~~~ 139 (158)
T 3eyt_A 73 EHHEAMTPISLKAFLHEYRI--KFPVGVDQPGDGAMPRTMAAYQMR--------GTPS---LLLIDKAGDLRAHHFGDVS 139 (158)
T ss_dssp SCGGGSCHHHHHHHHHHTTC--CSCEEEECCCSSSSCHHHHHTTCC--------SSSE---EEEECTTSEEEEEEESCCC
T ss_pred cccccCCHHHHHHHHHHcCC--CceEEEcCccchhhHHHHHHcCCC--------CCCE---EEEECCCCCEEEEEeCCCC
Confidence 589999999999999 9999999998 799999987 5554 89998 9999999987643
Q ss_pred cceeCCHHHHHh
Q 038822 149 DFTVSSADDILK 160 (162)
Q Consensus 149 ~~~~~~~~~il~ 160 (162)
. +++++.|+
T Consensus 140 ~---~~l~~~i~ 148 (158)
T 3eyt_A 140 E---LLLGAEIA 148 (158)
T ss_dssp H---HHHHHHHH
T ss_pred H---HHHHHHHH
Confidence 2 44555444
No 55
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.95 E-value=1.3e-27 Score=171.47 Aligned_cols=147 Identities=10% Similarity=0.059 Sum_probs=111.0
Q ss_pred CCCCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC
Q 038822 1 MAPIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN 80 (162)
Q Consensus 1 m~~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d 80 (162)
|+.+++|+++|+|+++ +.+|++++|+++ +||++||+|| ++|||+|+.+ ++.|++++++++++++ +|++|+.|
T Consensus 20 ~~~~~~g~~~p~f~l~----~~~G~~v~l~~~-~Gk~vlv~F~-atwC~~C~~~-~~~l~~l~~~~~~~~v-~vv~is~d 91 (185)
T 2gs3_A 20 FQSMRCARSMHEFSAK----DIDGHMVNLDKY-RGFVCIVTNV-ASQGGKTEVN-YTQLVDLHARYAECGL-RILAFPCN 91 (185)
T ss_dssp SGGGGGCCCGGGCEEE----BTTSCEEEGGGG-TTSEEEEEEE-CSSSTTHHHH-HHHHHHHHHHHGGGTE-EEEEEECC
T ss_pred hhhccCCCCcCCceeE----cCCCCEeeHHHc-CCCEEEEEEe-cCCCCchHHH-HHHHHHHHHHhhcCCe-EEEEEECc
Confidence 4568899999999999 899999999997 9998888888 8999999998 9999999999998899 99999975
Q ss_pred --------CHHHHHHHHHhCCCCCceEEEE--cCCchHH----HHcCCcccc-ccCCCCccceeEEEEEc-CCeEEEEEe
Q 038822 81 --------DPFVMKAWAKTFPKNKSVKFLA--DGSAKYT----HALGLELDL-SEKGLGTQSRRFALLVD-DLKVKAANV 144 (162)
Q Consensus 81 --------~~~~~~~~~~~~~~~~~~~~l~--D~~~~~~----~~~gv~~~~-~~~~~~~~~~~~~~ii~-~g~i~~~~~ 144 (162)
+++..++|.+++++ +||++. |.++..+ +.+...... ...+......|.+||+| +|+|++.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~ 169 (185)
T 2gs3_A 92 QFGKQEPGSNEEIKEFAAGYNV--KFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYG 169 (185)
T ss_dssp TTTTCCCSCHHHHHHHHHHTTC--CSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEEC
T ss_pred ccCCCCCCCHHHHHHHHHHcCC--CCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeC
Confidence 57889999999998 999997 5555433 322211000 00000111124599998 999999998
Q ss_pred ecCCcceeCCHHHHHh
Q 038822 145 ESGGDFTVSSADDILK 160 (162)
Q Consensus 145 ~~~~~~~~~~~~~il~ 160 (162)
+.... +++++.|+
T Consensus 170 g~~~~---~~l~~~i~ 182 (185)
T 2gs3_A 170 PMEEP---LVIEKDLP 182 (185)
T ss_dssp TTSCG---GGGGGGHH
T ss_pred CCCCH---HHHHHHHH
Confidence 65332 44444444
No 56
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.95 E-value=1.2e-27 Score=166.84 Aligned_cols=135 Identities=19% Similarity=0.232 Sum_probs=115.2
Q ss_pred CCCCCCCCCCCCeeeeeeecC-CCceeEehhhhcCCCeEEEEEeeCCCCCCCCc-CCHhHHHHhHHHHHhCCCCeEEEEE
Q 038822 1 MAPIAVGDPLPDGTLVYFDEQ-DQLQQVSVHSLAAGKKVILFGVPGDFTPTCSL-KHVPGFIEKADELQSKGVDEILCIS 78 (162)
Q Consensus 1 m~~l~~G~~~P~f~l~~~~~~-~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~-~~~~~l~~~~~~~~~~~~~~v~~is 78 (162)
|+. ..|.++|+|+++ + .+|++++|+++ +||++||.|| ++|||.|.. . ++.|++++++++++++ .+++|+
T Consensus 1 ms~-~~g~~~p~~~~~----~~~~g~~~~l~~~-~gk~vlv~F~-a~~C~~C~~e~-~~~l~~l~~~~~~~~v-~~v~v~ 71 (160)
T 3lor_A 1 MSS-LDNAPLLELDVQ----EWVNHEGLSNEDL-RGKVVVVEVF-QMLCPGCVNHG-VPQAQKIHRMIDESQV-QVIGLH 71 (160)
T ss_dssp ----CTTCCBCCCCEE----EESSSCCCCHHHH-TTSEEEEEEE-CTTCHHHHHTH-HHHHHHHHHHSCTTTE-EEEEEE
T ss_pred Ccc-cCCCcCCCcccc----cccCCCccCHHHh-CCCEEEEEEE-cCCCcchhhhh-hHHHHHHHHHhCcCCc-EEEEEe
Confidence 553 479999999999 6 78999999998 8999999998 779999999 4 8999999999998889 999999
Q ss_pred c-------CCHHHHHHHHHhCCCCCceEEEEcCCch------HHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEe
Q 038822 79 V-------NDPFVMKAWAKTFPKNKSVKFLADGSAK------YTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANV 144 (162)
Q Consensus 79 ~-------d~~~~~~~~~~~~~~~~~~~~l~D~~~~------~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~ 144 (162)
. ++.+..++|.+++++ +|+++.|.++. +++.||+. ++|+ +||+| +|+|++.+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~v~--------~~P~---~~lid~~G~i~~~~~ 138 (160)
T 3lor_A 72 SVFEHHDVMTPEALKVFIDEFGI--KFPVAVDMPREGQRIPSTMKKYRLE--------GTPS---IILADRKGRIRQVQF 138 (160)
T ss_dssp CCCSCGGGSCHHHHHHHHHHTTC--CSCEEEECCCTTCSSCHHHHHTTCC--------SSSE---EEEECTTSBEEEEEE
T ss_pred ccccccccCCHHHHHHHHHHcCC--CCcEEECCccccchhhhHHHhcccC--------ccce---EEEECCCCcEEEEec
Confidence 7 789999999999999 99999999988 99999997 5554 89998 999999998
Q ss_pred ecCCcceeCCHHHHHh
Q 038822 145 ESGGDFTVSSADDILK 160 (162)
Q Consensus 145 ~~~~~~~~~~~~~il~ 160 (162)
+.... +++++.|+
T Consensus 139 g~~~~---~~l~~~i~ 151 (160)
T 3lor_A 139 GQVDD---FVLGLLLG 151 (160)
T ss_dssp SCCCH---HHHHHHHH
T ss_pred CcCCH---HHHHHHHH
Confidence 76443 44555444
No 57
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.94 E-value=2.1e-27 Score=163.05 Aligned_cols=131 Identities=15% Similarity=0.105 Sum_probs=114.3
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHH---hHHHHHhCCCCeEEEEEc
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIE---KADELQSKGVDEILCISV 79 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~---~~~~~~~~~~~~v~~is~ 79 (162)
.+.+|+++|+|+++ +.+|+.++|+++ +||++||+|| ++|||+|+.+ +|.|++ +++++++.++ .|++|+.
T Consensus 4 ~~~~G~~ap~f~l~----~~~g~~~~l~~~-~gk~vll~F~-a~wC~~C~~~-~~~l~~~~~l~~~~~~~~~-~vi~i~~ 75 (142)
T 3eur_A 4 KNRLGTKALNFTYT----LDSGVKGTLYQF-PAEYTLLFIN-NPGCHACAEM-IEGLKASPVINGFTAAKKL-KVLSIYP 75 (142)
T ss_dssp TTCTTSBCCCCEEE----ETTSCEEETTTC-CCSEEEEEEC-CSSSHHHHHH-HHHHHHCHHHHHHHHTTSE-EEEEEEC
T ss_pred hhcCCCccCCcEEE----cCCCCEeeHHHc-CCCEEEEEEE-CCCCccHHHH-HHHHhhhHHHHHHhccCCe-EEEEEEc
Confidence 47899999999999 899999999997 8999999988 9999999998 999999 9999998899 9999999
Q ss_pred CC-HHHHHHHHHhCCCCCceEEEEcCCch--HHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCH
Q 038822 80 ND-PFVMKAWAKTFPKNKSVKFLADGSAK--YTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSA 155 (162)
Q Consensus 80 d~-~~~~~~~~~~~~~~~~~~~l~D~~~~--~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~ 155 (162)
|+ .+..++|.++++. +|+.+.|+++. +++.|++. ++| ++||+| +|+|++...+ .+++
T Consensus 76 d~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~v~--------~~P---~~~lid~~G~i~~~~~~------~~~l 136 (142)
T 3eur_A 76 DEELDEWKKHRNDFAK--EWTNGYDKELVIKNKNLYDLR--------AIP---TLYLLDKNKTVLLKDAT------LQKV 136 (142)
T ss_dssp SSCHHHHHHHGGGSCT--TSEEEECTTCHHHHTTCSCCT--------TCS---EEEEECTTCBEEEEEEC------HHHH
T ss_pred CCCHHHHHHHHHhccc--ccccccCccchhhhhhhcCCC--------cCC---eEEEECCCCcEEecCCC------HHHH
Confidence 75 5778899999998 99999999876 77888886 455 489999 9999998863 2566
Q ss_pred HHHHh
Q 038822 156 DDILK 160 (162)
Q Consensus 156 ~~il~ 160 (162)
++.|+
T Consensus 137 ~~~l~ 141 (142)
T 3eur_A 137 EQYLA 141 (142)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66665
No 58
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.94 E-value=3.3e-27 Score=163.33 Aligned_cols=133 Identities=19% Similarity=0.291 Sum_probs=116.0
Q ss_pred CCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC-CHH
Q 038822 5 AVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN-DPF 83 (162)
Q Consensus 5 ~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d-~~~ 83 (162)
++|+++|+|++. +.+|+.++++++ +||++||+|| ++|||.|..+ ++.+.++++++++.++ .+++|+.+ +++
T Consensus 1 ~~G~~~p~~~l~----~~~g~~~~l~~~-~gk~vlv~F~-~~~C~~C~~~-~~~l~~~~~~~~~~~v-~vv~v~~d~~~~ 72 (151)
T 2f9s_A 1 SEGSDAPNFVLE----DTNGKRIELSDL-KGKGVFLNFW-GTWCEPCKKE-FPYMANQYKHFKSQGV-EIVAVNVGESKI 72 (151)
T ss_dssp -CCEECCCCEEE----CTTCCEEEGGGG-TTSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHGGGTE-EEEEEEESCCHH
T ss_pred CCCCcCCcceeE----cCCCCEEEHHHc-CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHhccCCe-EEEEEECCCCHH
Confidence 479999999999 899999999997 9999999998 8999999998 9999999999998889 99999985 678
Q ss_pred HHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 84 VMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
..++|.+++++ +|+++.|++..+++.|++. ++| +++|+| +|+|++.+.+... .+++.+.|+.
T Consensus 73 ~~~~~~~~~~~--~~~~~~d~~~~~~~~~~v~--------~~P---~~~lid~~G~i~~~~~G~~~---~~~l~~~l~~ 135 (151)
T 2f9s_A 73 AVHNFMKSYGV--NFPVVLDTDRQVLDAYDVS--------PLP---TTFLINPEGKVVKVVTGTMT---ESMIHDYMNL 135 (151)
T ss_dssp HHHHHHHHHTC--CSCEEEETTSHHHHHTTCC--------SSC---EEEEECTTSEEEEEEESCCC---HHHHHHHHHH
T ss_pred HHHHHHHHcCC--CceEEECCchHHHHhcCCC--------CCC---eEEEECCCCcEEEEEeCCCC---HHHHHHHHHH
Confidence 89999999998 9999999999999999987 455 489998 9999999886533 2555555543
No 59
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.94 E-value=2.3e-27 Score=166.69 Aligned_cols=139 Identities=12% Similarity=0.077 Sum_probs=108.1
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC--
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN-- 80 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d-- 80 (162)
.+++|+++|+|+++ +.+|++++++++ +||++||+|| ++|||+|+.+ ++.|++++++++++++ +|++|+.|
T Consensus 4 ~~~~g~~~p~f~l~----~~~G~~~~l~~~-~gk~vlv~f~-a~~C~~C~~~-~~~l~~l~~~~~~~~~-~vv~v~~d~~ 75 (169)
T 2v1m_A 4 SHKSWNSIYEFTVK----DINGVDVSLEKY-RGHVCLIVNV-ACKCGATDKN-YRQLQEMHTRLVGKGL-RILAFPCNQF 75 (169)
T ss_dssp ---CCCSGGGCEEE----BTTSCEEEGGGG-TTSEEEEEEE-CSSSTTHHHH-HHHHHHHHHHHGGGTE-EEEEEECCCS
T ss_pred cccCCcccccceee----cCCCCCccHHHc-CCCEEEEEEe-eccCCchHHH-HHHHHHHHHHhhcCCe-EEEEEECCcc
Confidence 58999999999999 899999999997 9999999998 7999999998 9999999999998899 99999975
Q ss_pred ------CHHHHHHH-HHhCCCCCceEEEE--cCCchHHH-Hc--------CCccccccCCCCccceeEEEEEc-CCeEEE
Q 038822 81 ------DPFVMKAW-AKTFPKNKSVKFLA--DGSAKYTH-AL--------GLELDLSEKGLGTQSRRFALLVD-DLKVKA 141 (162)
Q Consensus 81 ------~~~~~~~~-~~~~~~~~~~~~l~--D~~~~~~~-~~--------gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~ 141 (162)
+++.+++| .+++++ +||++. |.++..++ .| |+. +......|.+||+| +|+|++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~------~~~i~~~P~~~lid~~G~i~~ 147 (169)
T 2v1m_A 76 GGQEPWAEAEIKKFVTEKYGV--QFDMFSKIKVNGSDADDLYKFLKSRQHGTL------TNNIKWNFSKFLVDRQGQPVK 147 (169)
T ss_dssp TTCCCSCHHHHHHHHHHHHCC--CSEEBCCCCCSSTTSCHHHHHHHHHSCCSS------SCSCCSTTCEEEECTTSCEEE
T ss_pred CCCCCCCHHHHHHHHHHhcCC--CCceEEEEeecCccccHHHHHHHhhcCCcc------CCcccccceEEEECCCCCEEE
Confidence 57889999 599998 999996 77765442 23 432 10011223489998 999999
Q ss_pred EEeecCCcceeCCHHHHHh
Q 038822 142 ANVESGGDFTVSSADDILK 160 (162)
Q Consensus 142 ~~~~~~~~~~~~~~~~il~ 160 (162)
.+.+.... +++.+.|+
T Consensus 148 ~~~g~~~~---~~l~~~i~ 163 (169)
T 2v1m_A 148 RYSPTTAP---YDIEGDIM 163 (169)
T ss_dssp EECTTSCG---GGGHHHHH
T ss_pred EcCCCCCH---HHHHHHHH
Confidence 98875332 44444443
No 60
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.94 E-value=2.8e-27 Score=169.17 Aligned_cols=140 Identities=12% Similarity=0.090 Sum_probs=111.0
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC--
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN-- 80 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d-- 80 (162)
++++|+++|+|+++ +.+|++++|+++ +||++||+|| ++|||+|+.+ ++.|++++++++++++ +|++|+.|
T Consensus 20 ~~~~g~~~p~f~l~----~~~G~~~~l~~~-~gk~vll~F~-atwC~~C~~~-~~~l~~l~~~~~~~~v-~vv~vs~d~~ 91 (183)
T 2obi_A 20 DWRCARSMHEFSAK----DIDGHMVNLDKY-RGFVCIVTNV-ASQCGKTEVN-YTQLVDLHARYAECGL-RILAFPCNQF 91 (183)
T ss_dssp CGGGCCSGGGCEEE----BTTSCEEEGGGG-TTSEEEEEEE-CSSSTTHHHH-HHHHHHHHHHHGGGTE-EEEEEECCCS
T ss_pred CCcccCcccceEEE----cCCCCEeeHHHc-CCCEEEEEEe-CCCCCCcHHH-HHHHHHHHHHHhcCCe-EEEEEECCCC
Confidence 57899999999999 899999999997 9999888888 8999999998 9999999999998899 99999975
Q ss_pred ------CHHHHHHHHHhCCCCCceEEEE--cCCchHHH-Hc----------CCccccccCCCCccceeEEEEEc-CCeEE
Q 038822 81 ------DPFVMKAWAKTFPKNKSVKFLA--DGSAKYTH-AL----------GLELDLSEKGLGTQSRRFALLVD-DLKVK 140 (162)
Q Consensus 81 ------~~~~~~~~~~~~~~~~~~~~l~--D~~~~~~~-~~----------gv~~~~~~~~~~~~~~~~~~ii~-~g~i~ 140 (162)
+++.+++|.+++++ +||++. |.++..++ .| |+. +......|.+||+| +|+|+
T Consensus 92 ~~~e~~~~~~~~~~~~~~~~--~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~------~~~i~~~P~~~lid~~G~i~ 163 (183)
T 2obi_A 92 GKQEPGSNEEIKEFAAGYNV--KFDMFSKICVNGDDAHPLWKWMKIQPKGKGIL------GNAIKWNFTKFLIDKNGCVV 163 (183)
T ss_dssp TTCCCSCHHHHHHHHHTTTC--CSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSS------SSSCCSTTCEEEECTTSCEE
T ss_pred CCCCCCCHHHHHHHHHHcCC--CceEEeeeccCCcchhHHHHHhhccCCCCCcc------cccccccceEEEECCCCCEE
Confidence 68899999999998 999997 77765432 23 322 00011124589998 99999
Q ss_pred EEEeecCCcceeCCHHHHHhc
Q 038822 141 AANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 141 ~~~~~~~~~~~~~~~~~il~~ 161 (162)
+.+.+.... +++++.|++
T Consensus 164 ~~~~g~~~~---~~l~~~i~~ 181 (183)
T 2obi_A 164 KRYGPMEEP---LVIEKDLPH 181 (183)
T ss_dssp EEECTTSCT---HHHHTTSGG
T ss_pred EEeCCCCCH---HHHHHHHHH
Confidence 998765332 344444443
No 61
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.94 E-value=1.2e-26 Score=160.64 Aligned_cols=122 Identities=16% Similarity=0.235 Sum_probs=110.5
Q ss_pred CCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEE--cCC
Q 038822 4 IAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCIS--VND 81 (162)
Q Consensus 4 l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is--~d~ 81 (162)
..+|+++|+|+++ +.+|+.++++++ +||++||.|| ++|||.|..+ ++.++++++++++.++ .+++|+ .++
T Consensus 2 ~~~G~~~p~~~l~----~~~g~~~~l~~~-~gk~~lv~f~-~~~C~~C~~~-~~~l~~l~~~~~~~~~-~vv~v~~~~~~ 73 (153)
T 2l5o_A 2 SLDSKTAPAFSLP----DLHGKTVSNADL-QGKVTLINFW-FPSCPGCVSE-MPKIIKTANDYKNKNF-QVLAVAQPIDP 73 (153)
T ss_dssp --CCTTCCSCEEE----CTTSCEEEHHHH-TTCEEEEEEE-CTTCTTHHHH-HHHHHHHHHHGGGTTE-EEEEEECTTSC
T ss_pred CCCCCCCCCcEee----cCCCCCccHHHh-CCCEEEEEEE-CCCCccHHHH-HHHHHHHHHHhccCCe-EEEEEecCCCC
Confidence 4789999999999 899999999998 8999999888 8999999997 9999999999998888 999999 578
Q ss_pred HHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeec
Q 038822 82 PFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVES 146 (162)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~ 146 (162)
.+..++|.+++++ +|+++.|.+..+++.||+. ++|+ ++|+| +|+|++.+.+.
T Consensus 74 ~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~i~--------~~P~---~~lid~~G~i~~~~~g~ 126 (153)
T 2l5o_A 74 IESVRQYVKDYGL--PFTVMYDADKAVGQAFGTQ--------VYPT---SVLIGKKGEILKTYVGE 126 (153)
T ss_dssp HHHHHHHHHHTTC--CSEEEECSSCHHHHHHTCC--------SSSE---EEEECSSSCCCEEEESS
T ss_pred HHHHHHHHHHcCC--CceEEcCchHHHHHHcCCC--------ccCe---EEEECCCCcEEEEEcCC
Confidence 8999999999999 9999999999999999987 4554 88998 99999998865
No 62
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.94 E-value=2.8e-27 Score=166.44 Aligned_cols=139 Identities=16% Similarity=0.168 Sum_probs=107.7
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC--
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN-- 80 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d-- 80 (162)
.+++|+++|+|+++ +.+|++++++++ +||++||+|| ++|||+|+.+ ++.|++++++++++++ +|++|+.|
T Consensus 5 ~~~~g~~~p~f~l~----~~~g~~~~l~~~-~gk~vll~f~-a~~C~~C~~~-~~~l~~l~~~~~~~~~-~vv~vs~d~~ 76 (170)
T 2p5q_A 5 TSKNPESVHDFTVK----DAKENDVDLSIF-KGKVLLIVNV-ASKCGMTNSN-YAEMNQLYEKYKDQGL-EILAFPCNQF 76 (170)
T ss_dssp -----CCGGGCEEE----BTTSCEEEGGGG-TTSEEEEEEE-CSSSTTHHHH-HHHHHHHHHHHGGGTE-EEEEEECCTT
T ss_pred cCCCCccccceEEE----cCCCCEecHHHh-CCCEEEEEEE-eccCCccHHH-HHHHHHHHHHhccCCE-EEEEEECCCC
Confidence 46899999999999 899999999997 9999999988 7999999998 9999999999998899 99999974
Q ss_pred ------CHHHHHHHHH-hCCCCCceEEE--EcCCchHHH-H--------cCCccccccCCCCccceeEEEEEc-CCeEEE
Q 038822 81 ------DPFVMKAWAK-TFPKNKSVKFL--ADGSAKYTH-A--------LGLELDLSEKGLGTQSRRFALLVD-DLKVKA 141 (162)
Q Consensus 81 ------~~~~~~~~~~-~~~~~~~~~~l--~D~~~~~~~-~--------~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~ 141 (162)
+++.+++|.+ ++++ +|+++ .|+++..++ . +|+. +.++|..+.+||+| +|+|++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~------~~~~p~~~~~~lid~~G~i~~ 148 (170)
T 2p5q_A 77 GEEEPGTNDQITDFVCTRFKS--EFPIFDKIDVNGENASPLYRFLKLGKWGIF------GDDIQWNFAKFLVNKDGQVVD 148 (170)
T ss_dssp TTCCCSCHHHHHHHHHHHTCC--CSCBBCCCBSSSTTBCHHHHHHHTHHHHTT------CSCCCSTTCEEEECTTSCEEE
T ss_pred CCCCCCCHHHHHHHHHHhcCC--CceeEeeeccCCCchHHHHHHHHhcCCCcc------CCcccccccEEEECCCCCEEE
Confidence 6889999999 7888 89999 687765432 2 2441 11345333589998 999999
Q ss_pred EEeecCCcceeCCHHHHHh
Q 038822 142 ANVESGGDFTVSSADDILK 160 (162)
Q Consensus 142 ~~~~~~~~~~~~~~~~il~ 160 (162)
.+.+.... +++++.|+
T Consensus 149 ~~~g~~~~---~~l~~~i~ 164 (170)
T 2p5q_A 149 RYYPTTSP---LSLERDIK 164 (170)
T ss_dssp EECTTSCG---GGGHHHHH
T ss_pred eeCCCCCH---HHHHHHHH
Confidence 99865332 44555444
No 63
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.94 E-value=9.3e-27 Score=166.86 Aligned_cols=118 Identities=16% Similarity=0.193 Sum_probs=109.0
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEc---
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISV--- 79 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~--- 79 (162)
.+++|+++|+|+++ +.+|++++|+++ +||++||.|| ++|||.|..+ ++.|++++++++++ + .+++|+.
T Consensus 6 ~~~~g~~~p~f~l~----~~~G~~~~l~~~-~gk~vlv~F~-a~~C~~C~~~-~~~l~~l~~~~~~~-~-~~v~v~~d~~ 76 (188)
T 2cvb_A 6 ELPLESPLIDAELP----DPRGGRYRLSQF-HEPLLAVVFM-CNHCPYVKGS-IGELVALAERYRGK-V-AFVGINANDY 76 (188)
T ss_dssp CCCTTCBCCCCEEE----CTTSCEEEGGGC-CSSEEEEEEE-CSSCHHHHTT-HHHHHHHHHHTTTT-E-EEEEEECCCT
T ss_pred cCCCCCCCCCceee----cCCCCEEeHHHh-CCCEEEEEEE-CCCCccHHHH-HHHHHHHHHHhhcC-e-EEEEEEcCcc
Confidence 58899999999999 899999999997 8999999998 8999999998 99999999999877 8 9999998
Q ss_pred -----CCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEE
Q 038822 80 -----NDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAA 142 (162)
Q Consensus 80 -----d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~ 142 (162)
++.+.+++|.+++++ +|+++.|.++.+++.|++. ++| ++||+| +|+|++.
T Consensus 77 ~~~~~d~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~v~--------~~P---~~~lid~~G~i~~~ 132 (188)
T 2cvb_A 77 EKYPEDAPEKMAAFAEEHGI--FFPYLLDETQEVAKAYRAL--------RTP---EVFLFDERRLLRYH 132 (188)
T ss_dssp TTCGGGSHHHHHHHHHHHTC--CSCEEECSSSHHHHHTTCC--------EES---EEEEECTTCBEEEE
T ss_pred ccccccCHHHHHHHHHHhCC--CceEEECCcchHHHHcCCC--------CCC---eEEEECCCCcEEEE
Confidence 678999999999998 9999999999999999987 344 489998 9999998
No 64
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.94 E-value=9.6e-27 Score=159.81 Aligned_cols=122 Identities=16% Similarity=0.148 Sum_probs=110.1
Q ss_pred CCCCCCCCCCCeeeeeeecCCCceeEehh--hhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHH-HhCCCCeEEEEE
Q 038822 2 APIAVGDPLPDGTLVYFDEQDQLQQVSVH--SLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADEL-QSKGVDEILCIS 78 (162)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~~~g~~~~l~--~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~-~~~~~~~v~~is 78 (162)
+.+++|+++|+|++. +.+|+.++++ ++ +||++||.|| ++|||.|..+ ++.+.++++++ ++.++ .+++|+
T Consensus 3 ~~~~~g~~~p~~~l~----~~~g~~~~l~~~~~-~gk~vll~F~-~~~C~~C~~~-~~~l~~l~~~~~~~~~~-~~v~v~ 74 (148)
T 3fkf_A 3 AKVTVGKSAPYFSLP----NEKGEKLSRSAERF-RNRYLLLNFW-ASWCDPQPEA-NAELKRLNKEYKKNKNF-AMLGIS 74 (148)
T ss_dssp --CCTTSBCCCCCEE----BTTSCEECTTSTTT-TTSEEEEEEE-CGGGCCCHHH-HHHHHHHHHHTTTCTTE-EEEEEE
T ss_pred ccccCCCcCCCeEee----CCCCCEEecccccc-CCcEEEEEEE-CCCCHHHHHH-hHHHHHHHHHhcCCCCe-EEEEEE
Confidence 468999999999999 8999999999 97 8999999999 8999999998 99999999999 78889 999999
Q ss_pred cC-CHHHHHHHHHhCCCCCceEEEEcC---CchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEe
Q 038822 79 VN-DPFVMKAWAKTFPKNKSVKFLADG---SAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANV 144 (162)
Q Consensus 79 ~d-~~~~~~~~~~~~~~~~~~~~l~D~---~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~ 144 (162)
.| +.+..++|.+++++ +|+++.|. +..+++.||+. ++|+ ++|+| +|+|++.+.
T Consensus 75 ~d~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~v~--------~~P~---~~lid~~G~i~~~~~ 132 (148)
T 3fkf_A 75 LDIDREAWETAIKKDTL--SWDQVCDFTGLSSETAKQYAIL--------TLPT---NILLSPTGKILARDI 132 (148)
T ss_dssp CCSCHHHHHHHHHHTTC--CSEEECCSCGGGCHHHHHTTCC--------SSSE---EEEECTTSBEEEESC
T ss_pred CCCCHHHHHHHHHHcCC--CceEEEccCCcchHHHHhcCCC--------CcCE---EEEECCCCeEEEecC
Confidence 87 56789999999999 99999998 67999999997 5554 89998 999999886
No 65
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.94 E-value=1.4e-26 Score=164.83 Aligned_cols=121 Identities=21% Similarity=0.349 Sum_probs=107.7
Q ss_pred CCCCCCCCCCCeeeeeeecCCCc--eeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEE-
Q 038822 2 APIAVGDPLPDGTLVYFDEQDQL--QQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCIS- 78 (162)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~~~g--~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is- 78 (162)
..+.+|+++|+|+++ +.+| ++++++++ +||++||+|| ++|||.|..+ ++.|++++++ ++ .|++|+
T Consensus 28 ~~~~~G~~~P~f~l~----~~~g~~~~~~l~~~-~gk~vll~F~-a~~C~~C~~~-~~~l~~l~~~----~v-~vv~vs~ 95 (176)
T 3kh7_A 28 PSALIGKPFPAFDLP----SVQDPARRLTEADL-KGKPALVNVW-GTWCPSCRVE-HPELTRLAEQ----GV-VIYGINY 95 (176)
T ss_dssp TTTTTTSBCCCCEEE----BSSCTTSEEEGGGG-CSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHT----TC-EEEEEEE
T ss_pred cccccCCcCCCcEec----ccCCCCceecHHHh-CCCEEEEEEE-CCcCHHHHHH-HHHHHHHHHC----CC-EEEEEeC
Confidence 468999999999999 7777 89999997 8999999999 8999999998 9999998865 78 999999
Q ss_pred cCCHHHHHHHHHhCCCCCceE-EEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecC
Q 038822 79 VNDPFVMKAWAKTFPKNKSVK-FLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESG 147 (162)
Q Consensus 79 ~d~~~~~~~~~~~~~~~~~~~-~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~ 147 (162)
.++++..++|.+++++ +++ ++.|+++.+++.||+. ++| .+||+| +|+|++.+.+..
T Consensus 96 ~d~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~v~--------~~P---~~~lid~~G~i~~~~~g~~ 153 (176)
T 3kh7_A 96 KDDNAAAIKWLNELHN--PYLLSISDADGTLGLDLGVY--------GAP---ETYLIDKQGIIRHKIVGVV 153 (176)
T ss_dssp SCCHHHHHHHHHHTTC--CCSEEEEETTCHHHHHHTCC--------SSC---EEEEECTTCBEEEEEESCC
T ss_pred CCCHHHHHHHHHHcCC--CCceEEECCcchHHHHcCCC--------CCC---eEEEECCCCeEEEEEcCCC
Confidence 4789999999999998 777 6899999999999997 455 489998 999999998763
No 66
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.94 E-value=1.3e-26 Score=165.35 Aligned_cols=138 Identities=17% Similarity=0.140 Sum_probs=115.3
Q ss_pred CCCCCCCCCCeeeeeeecCC--CceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCC-----eEE
Q 038822 3 PIAVGDPLPDGTLVYFDEQD--QLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVD-----EIL 75 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~--~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~-----~v~ 75 (162)
.+.+|+++|+|+++ +. +|++++|+++ +||++||+|| ++|||.|+.+ ++.|++++++++++++. .|+
T Consensus 30 ~~~~g~~~p~f~l~----~~~~~g~~~~l~~~-~gk~vlv~F~-a~~C~~C~~~-~~~l~~l~~~~~~~~~~~~~~v~~v 102 (183)
T 3lwa_A 30 DEADRQQLPDIGGD----SLMEEGTQINLSDF-ENQVVILNAW-GQWCAPCRSE-SDDLQIIHEELQAAGNGDTPGGTVL 102 (183)
T ss_dssp CGGGCCCCCCCEEE----BSSSTTCEEEGGGG-TTSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHHHCC---CCSEEEE
T ss_pred ccccCCCCCceecc----ccccCCcEecHHHh-CCCEEEEEEE-CCcCHhHHHH-HHHHHHHHHHHHhcCCCccCCcEEE
Confidence 46789999999999 88 9999999997 9999999998 8999999998 99999999999987641 689
Q ss_pred EEEcCC--HHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCccee
Q 038822 76 CISVND--PFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTV 152 (162)
Q Consensus 76 ~is~d~--~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~ 152 (162)
+|+.|+ ++..++|.+++++ +|+++.|+++.+.+.|+.. +....|.+||+| +|+|++.+.+... .
T Consensus 103 ~v~~d~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~--------~v~~~P~~~lid~~G~i~~~~~g~~~---~ 169 (183)
T 3lwa_A 103 GINVRDYSRDIAQDFVTDNGL--DYPSIYDPPFMTAASLGGV--------PASVIPTTIVLDKQHRPAAVFLREVT---S 169 (183)
T ss_dssp EEECSCCCHHHHHHHHHHTTC--CSCEEECTTCGGGGGTTTC--------CTTCCSEEEEECTTSCEEEEECSCCC---H
T ss_pred EEECCCCCHHHHHHHHHHcCC--CccEEECCcchHHHHhccC--------CCCCCCeEEEECCCCcEEEEEcCCCC---H
Confidence 999876 8999999999999 9999999999999999743 122334589998 9999999886533 2
Q ss_pred CCHHHHHh
Q 038822 153 SSADDILK 160 (162)
Q Consensus 153 ~~~~~il~ 160 (162)
+++.+.|+
T Consensus 170 ~~l~~~l~ 177 (183)
T 3lwa_A 170 KDVLDVAL 177 (183)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 45555444
No 67
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.94 E-value=1.3e-27 Score=164.25 Aligned_cols=132 Identities=15% Similarity=0.212 Sum_probs=110.4
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC-C
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN-D 81 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d-~ 81 (162)
.+++|+++|+|++. .+|++++|+++ +||++||+|| ++|||.|..+ ++.|++++++++++++ +|++||.| +
T Consensus 6 ~l~~G~~~P~f~l~-----~~g~~~~l~~~-~gk~vll~F~-a~wC~~C~~~-~~~l~~l~~~~~~~~~-~vv~vs~d~~ 76 (143)
T 4fo5_A 6 GVNPGDLAPRIEFL-----GNDAKASFHNQ-LGRYTLLNFW-AAYDAESRAR-NVQLANEVNKFGPDKI-AMCSISMDEK 76 (143)
T ss_dssp SSSTTSBCCCCCC----------CCCSCCS-SCCEEEEEEE-CTTCHHHHHH-HHHHHHHHTTSCTTTE-EEEEEECCSC
T ss_pred ccCCcccCCceEEc-----CCCCEEEHHHh-CCCEEEEEEE-cCcCHHHHHH-HHHHHHHHHHhCcCCE-EEEEEEccCC
Confidence 58999999999995 47889999997 9999888888 8999999998 9999999999998899 99999998 6
Q ss_pred HHHHHHHHHhCCCCCce-EEEEcCC---chHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHH
Q 038822 82 PFVMKAWAKTFPKNKSV-KFLADGS---AKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSAD 156 (162)
Q Consensus 82 ~~~~~~~~~~~~~~~~~-~~l~D~~---~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~ 156 (162)
.+..++|.+++++ +| ++++|.+ ..+++.|++. +.|+ +||+| +|+|++.+.+ .++++
T Consensus 77 ~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~v~--------~~P~---~~lid~~G~i~~~~~~------~~~l~ 137 (143)
T 4fo5_A 77 ESIFTETVKIDKL--DLSTQFHEGLGKESELYKKYDLR--------KGFK---NFLINDEGVIIAANVT------PEKLT 137 (143)
T ss_dssp HHHHHHHHHHHTC--CGGGEEECTTGGGSHHHHHTTGG--------GCCC---EEEECTTSBEEEESCC------HHHHH
T ss_pred HHHHHHHHHHhCC--CCceeeecccccchHHHHHcCCC--------CCCc---EEEECCCCEEEEccCC------HHHHH
Confidence 7889999999998 89 8899985 6799999987 4554 89999 9999998752 25677
Q ss_pred HHHhcC
Q 038822 157 DILKSL 162 (162)
Q Consensus 157 ~il~~l 162 (162)
+.|+.|
T Consensus 138 ~~l~~i 143 (143)
T 4fo5_A 138 EILKAI 143 (143)
T ss_dssp HHHTC-
T ss_pred HHHHhC
Confidence 777654
No 68
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.94 E-value=1.9e-27 Score=170.00 Aligned_cols=139 Identities=14% Similarity=0.137 Sum_probs=106.2
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC--
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN-- 80 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d-- 80 (162)
.+++|+++|+|+++ +.+|++++|+++ +||++||+|| ++|||+|+.+ ++.|++++++++++++ +|++|+.|
T Consensus 22 ~~~~g~~~p~f~l~----~~~G~~~~l~~~-~Gk~vlv~F~-atwC~~C~~~-~p~l~~l~~~~~~~~v-~vv~vs~d~~ 93 (181)
T 2p31_A 22 SMQQEQDFYDFKAV----NIRGKLVSLEKY-RGSVSLVVNV-ASECGFTDQH-YRALQQLQRDLGPHHF-NVLAFPCNQF 93 (181)
T ss_dssp -----CCGGGCEEE----BTTSCEEEGGGG-TTSEEEEEEE-CSSSTTHHHH-HHHHHHHHHHHGGGTE-EEEEEECCCS
T ss_pred cCCcCCccCceEee----cCCCCEecHHHc-CCCEEEEEEe-ccCCCCcHHH-HHHHHHHHHHhhcCCE-EEEEEECcCC
Confidence 57899999999999 899999999997 9998888888 8999999998 9999999999999899 99999985
Q ss_pred ------CHHHHHHHHHh-CCCCCceEEEE--cCCchHHH---HcCCccccccCCCCcccee----EEEEEc-CCeEEEEE
Q 038822 81 ------DPFVMKAWAKT-FPKNKSVKFLA--DGSAKYTH---ALGLELDLSEKGLGTQSRR----FALLVD-DLKVKAAN 143 (162)
Q Consensus 81 ------~~~~~~~~~~~-~~~~~~~~~l~--D~~~~~~~---~~gv~~~~~~~~~~~~~~~----~~~ii~-~g~i~~~~ 143 (162)
+++.+++|.++ +++ +||++. |.++.... .|++. +.|..+ .+||+| +|+|++.+
T Consensus 94 ~~~e~~~~~~~~~~~~~~~~~--~~p~~~~~d~~g~~~~~~~~~~~~--------~~P~~~~~~~~~~lid~~G~i~~~~ 163 (181)
T 2p31_A 94 GQQEPDSNKEIESFARRTYSV--SFPMFSKIAVTGTGAHPAFKYLAQ--------TSGKEPTWNFWKYLVAPDGKVVGAW 163 (181)
T ss_dssp TTCCCSCHHHHHHHHHHHHCC--CSCBBCCCCCSSTTSCHHHHHHHH--------HHSCCCCSTTCEEEECTTSCEEEEE
T ss_pred CCCCCCCHHHHHHHHHhhcCC--CceeEeecccCCccchhhhhhhhh--------cCCCccccceeEEEEcCCCCEEEEe
Confidence 68899999999 898 999996 45444322 23332 222001 488888 99999998
Q ss_pred eecCCcceeCCHHHHHhcC
Q 038822 144 VESGGDFTVSSADDILKSL 162 (162)
Q Consensus 144 ~~~~~~~~~~~~~~il~~l 162 (162)
.+... .+++++.|++|
T Consensus 164 ~g~~~---~~~l~~~i~~l 179 (181)
T 2p31_A 164 DPTVS---VEEVRPQITAL 179 (181)
T ss_dssp CTTSC---HHHHHHHHHTT
T ss_pred CCCCC---HHHHHHHHHHH
Confidence 76433 25566666543
No 69
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.94 E-value=2.2e-27 Score=170.86 Aligned_cols=128 Identities=13% Similarity=0.153 Sum_probs=104.0
Q ss_pred CCCCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC
Q 038822 1 MAPIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN 80 (162)
Q Consensus 1 m~~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d 80 (162)
|+.++.|+++|+|+++ +.+|++++|+++ +||++||+|| ++|||+|+.+ ++.|++++++++++++ +|++|+.|
T Consensus 19 ~s~~~~~~~~p~f~l~----~~~G~~~~l~~~-~Gk~vll~F~-atwC~~C~~~-~~~l~~l~~~~~~~~v-~vv~vs~d 90 (190)
T 2vup_A 19 GSHMSAASSIFDFEVL----DADHKPYNLVQH-KGSPLLIYNV-ASKCGYTKGG-YETATTLYNKYKSQGF-TVLAFPCN 90 (190)
T ss_dssp -----CCCSGGGSCCB----BTTSSBCCGGGG-TTSCEEEEEE-CSSSTTHHHH-HHHHHHHHHHHGGGTC-EEEEEECC
T ss_pred cccCCCCCcccCeEEE----cCCCCEEEHHHc-CCCEEEEEEe-cCCCCccHHH-HHHHHHHHHHHhcCCe-EEEEEEcC
Confidence 4568899999999999 899999999997 9999999998 8999999998 9999999999998899 99999987
Q ss_pred --------CHHHHHHHH-HhCCCCCceEEEE--cCCchHHH---------HcCCccccccCCCCcc---ceeEEEEEc-C
Q 038822 81 --------DPFVMKAWA-KTFPKNKSVKFLA--DGSAKYTH---------ALGLELDLSEKGLGTQ---SRRFALLVD-D 136 (162)
Q Consensus 81 --------~~~~~~~~~-~~~~~~~~~~~l~--D~~~~~~~---------~~gv~~~~~~~~~~~~---~~~~~~ii~-~ 136 (162)
+++.+++|. +++++ +|+++. |.++..++ .|++. +.| ..+.+||+| +
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~--~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~--------~~P~i~~~~~~~lid~~ 160 (190)
T 2vup_A 91 QFGGQEPGNEEEIKEFVCTKFKA--EFPIMAKINVNGENAHPLYEYMKKTKPGIL--------KTKAIKWNFTSFLIDRD 160 (190)
T ss_dssp CSTTCCCSCHHHHHHHHHHHHCC--CSCBBCCCBSSSTTBCHHHHHHHHHSCCGG--------GCCSCCSTTCEEEECTT
T ss_pred ccCCCCCCCHHHHHHHHHHhcCC--CeEEEeecccCcccccHHHHHHHhhcCCcC--------CCccccccceEEEECCC
Confidence 789999999 89998 999997 66655432 23543 233 011489998 9
Q ss_pred CeEEEEEeec
Q 038822 137 LKVKAANVES 146 (162)
Q Consensus 137 g~i~~~~~~~ 146 (162)
|+|++.+.+.
T Consensus 161 G~i~~~~~g~ 170 (190)
T 2vup_A 161 GVPVERFSPG 170 (190)
T ss_dssp SCEEEEECTT
T ss_pred CcEEEEECCC
Confidence 9999998765
No 70
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.94 E-value=7.2e-27 Score=163.11 Aligned_cols=124 Identities=16% Similarity=0.228 Sum_probs=112.8
Q ss_pred CCCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCC
Q 038822 2 APIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVND 81 (162)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~ 81 (162)
..+++|+++|+|+++ +.+|+.++++++ +||++||+|| ++|||.|..+ ++.|.++++++++.++ .+++|+.+.
T Consensus 13 ~~~~~G~~~p~f~l~----~~~g~~~~l~~~-~gk~vll~F~-~~~C~~C~~~-~~~l~~~~~~~~~~~~-~~v~v~~d~ 84 (158)
T 3hdc_A 13 PLVRTGALAPNFKLP----TLSGENKSLAQY-RGKIVLVNFW-ASWCPYCRDE-MPSMDRLVKSFPKGDL-VVLAVNVEK 84 (158)
T ss_dssp CCCCTTSBCCCCEEE----CTTSCEEESGGG-TTSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHSSTTSE-EEEEEECSS
T ss_pred cccCCCCcCCCceeE----cCCCCEEehHHh-CCCEEEEEEE-CCcCHHHHHH-HHHHHHHHHHcccCCe-EEEEEeCCH
Confidence 358899999999999 899999999997 9999999999 8999999998 9999999999988888 999999987
Q ss_pred HHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCC
Q 038822 82 PFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGG 148 (162)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~ 148 (162)
..++|.+++++ +|+++.|.++.+++.|++. ++|+ +||+| +|+|++.+.+...
T Consensus 85 --~~~~~~~~~~~--~~~~~~d~~~~~~~~~~v~--------~~P~---~~lid~~G~i~~~~~G~~~ 137 (158)
T 3hdc_A 85 --RFPEKYRRAPV--SFNFLSDATGQVQQRYGAN--------RLPD---TFIVDRKGIIRQRVTGGIE 137 (158)
T ss_dssp --SCCGGGGGCCC--SCEEEECTTSHHHHHTTCC--------SSSE---EEEECTTSBEEEEEESCCC
T ss_pred --HHHHHHHHcCC--CceEEECchHHHHHHhCCC--------Ccce---EEEEcCCCCEEEEEeCCCc
Confidence 67889999998 9999999999999999997 5554 89998 9999999998644
No 71
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.94 E-value=8.9e-27 Score=166.57 Aligned_cols=142 Identities=18% Similarity=0.223 Sum_probs=117.9
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCC-
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVND- 81 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~- 81 (162)
.+.+|+++|+|+++ +.+|++++|+++ +||++||+|| ++|||+|+.+ ++.|+++++++++.++ +|++|+.|.
T Consensus 33 ~~~~g~~~p~f~l~----~~~G~~~~l~~~-~gk~vll~F~-a~~C~~C~~~-~~~l~~l~~~~~~~~~-~vv~v~~d~~ 104 (186)
T 1jfu_A 33 MASAPLKLPDLAFE----DADGKPKKLSDF-RGKTLLVNLW-ATWCVPCRKE-MPALDELQGKLSGPNF-EVVAINIDTR 104 (186)
T ss_dssp ECCSCCBCCCCEEE----CTTSCEEEGGGG-TTSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHCBTTE-EEEEEECCCS
T ss_pred cccCCCcCCCcEeE----cCCCCEeeHHHc-CCCEEEEEEE-eCCCHhHHHH-HHHHHHHHHHhccCCc-EEEEEECCCC
Confidence 47889999999999 899999999997 9999999998 8999999998 9999999999987788 999999975
Q ss_pred -HHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHHH
Q 038822 82 -PFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDIL 159 (162)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~il 159 (162)
++..++|.+++++ ..|+++.|+++.+.+.|++... ..++| .+||+| +|+|++.+.+... .+.+++.+.|
T Consensus 105 ~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~----~~~~P---~~~lid~~G~i~~~~~g~~~-~~~~~l~~~l 175 (186)
T 1jfu_A 105 DPEKPKTFLKEANL-TRLGYFNDQKAKVFQDLKAIGR----ALGMP---TSVLVDPQGCEIATIAGPAE-WASEDALKLI 175 (186)
T ss_dssp CTTHHHHHHHHTTC-CTTCCEECTTCHHHHHHHTTTC----CSSSS---EEEEECTTSBEEEEEESCCC-TTSHHHHHHH
T ss_pred CHHHHHHHHHHcCC-CCCceEECCcchHHHHhccccc----cCCCC---EEEEECCCCCEEEEEecCCc-cCHHHHHHHH
Confidence 4788999999987 2489999999999999998631 12344 599998 9999999987532 1234555555
Q ss_pred hc
Q 038822 160 KS 161 (162)
Q Consensus 160 ~~ 161 (162)
+.
T Consensus 176 ~~ 177 (186)
T 1jfu_A 176 RA 177 (186)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 72
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.94 E-value=3.2e-27 Score=169.66 Aligned_cols=137 Identities=13% Similarity=0.180 Sum_probs=108.2
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC--
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN-- 80 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d-- 80 (162)
.+..+.++|+|+++ +.+|++++|+++ +||++||+|| ++|||.|..+ +|.|++++++++++++ +|++|+.|
T Consensus 19 ~~~~~~~~p~f~l~----d~~G~~~~l~~~-~Gk~vlv~F~-atwC~~C~~~-~p~l~~l~~~~~~~~~-~vi~is~d~~ 90 (187)
T 3dwv_A 19 KMSAASSIFDFEVL----DADHKPYNLVQH-KGSPLLIYNV-ASKCGYTKGG-YETATTLYNKYKSQGF-TVLAFPSNQF 90 (187)
T ss_dssp -CTTCCSGGGSCCB----BTTSCBCCGGGG-TTSCEEEEEE-CCBCSCCTTH-HHHHHHHHHHHGGGTC-EEEEEEBCCC
T ss_pred hhcCCCccCCeEEE----cCCCCEeeHHHh-CCCEEEEEEe-cCCCCCcHHH-HHHHHHHHHHhhhCCe-EEEEEECccc
Confidence 47889999999999 999999999997 9999988888 9999999998 9999999999999999 99999975
Q ss_pred ------CHHHHHHHHHh-CCCCCceEEEE--cCCchHHH-Hc--------CCccccccCCCCcccee---EEEEEc-CCe
Q 038822 81 ------DPFVMKAWAKT-FPKNKSVKFLA--DGSAKYTH-AL--------GLELDLSEKGLGTQSRR---FALLVD-DLK 138 (162)
Q Consensus 81 ------~~~~~~~~~~~-~~~~~~~~~l~--D~~~~~~~-~~--------gv~~~~~~~~~~~~~~~---~~~ii~-~g~ 138 (162)
+.+.+++|.++ +++ +||+++ |.++..+. .| ++. +.+..| .+||+| +|+
T Consensus 91 ~~~e~~~~~~~~~~~~~~~~~--~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~--------~~~~iP~~~~~~liD~~G~ 160 (187)
T 3dwv_A 91 GGQEPGNEEEIKEFVCTKFKA--EFPIMAKINVNGENAHPLYEYMKKTKPGIL--------ATKAIKWNFTSFLIDRDGV 160 (187)
T ss_dssp SSCSSSBTTHHHHSCCBCCCC--SSCBBCCBCCSCC-CCHHHHHHHHHSCCSB--------SSSSCCSTTCEEEECTTSC
T ss_pred CCCCCCCHHHHHHHHHhccCC--CCceeeccccCCcchhHHHHHHHhhcCCcc--------CCCccccceeEEEECCCCC
Confidence 57888999984 588 999997 55554331 22 322 333334 589999 999
Q ss_pred EEEEEeecCCcceeCCHHHHHh
Q 038822 139 VKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 139 i~~~~~~~~~~~~~~~~~~il~ 160 (162)
|++.+.+.... +++++.|+
T Consensus 161 i~~~~~g~~~~---~~l~~~i~ 179 (187)
T 3dwv_A 161 PVERFSPGASV---KDIEEKLI 179 (187)
T ss_dssp EEEEECTTCCH---HHHHHHHH
T ss_pred EEEEECCCCCH---HHHHHHHH
Confidence 99999865332 34444443
No 73
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.94 E-value=5.7e-26 Score=156.98 Aligned_cols=137 Identities=16% Similarity=0.243 Sum_probs=117.3
Q ss_pred CCCCCCCCCCC-CeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEc
Q 038822 1 MAPIAVGDPLP-DGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISV 79 (162)
Q Consensus 1 m~~l~~G~~~P-~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~ 79 (162)
|+ +++|+++| +|+++ +.+|++++++++ +||+++|+|| ++|||.|+.+ ++.++++++++++.++ .+++|+.
T Consensus 1 m~-l~~G~~~p~~f~l~----~~~g~~~~l~~~-~gk~~lv~f~-~~~C~~C~~~-~~~l~~l~~~~~~~~~-~~v~v~~ 71 (152)
T 2lja_A 1 MS-LRSGNPSAASFSYP----DINGKTVSLADL-KGKYIYIDVW-ATWCGPCRGE-LPALKELEEKYAGKDI-HFVSLSC 71 (152)
T ss_dssp CC-TTTTCCCSSSCEEE----ETTTEEEESTTT-TTSEEEEEEC-CSSCCGGGGT-HHHHHHHHHHSTTSSE-EEEEEEC
T ss_pred Cc-cccCCCCCcccEee----cCCCCEeeHHHc-CCCEEEEEEE-CCcCHhHHHH-hHHHHHHHHHhccCCe-EEEEEEc
Confidence 55 89999999 99999 899999999997 8999999888 8999999998 9999999999988888 9999998
Q ss_pred CC-HHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHH
Q 038822 80 ND-PFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADD 157 (162)
Q Consensus 80 d~-~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~ 157 (162)
+. .+..++|.+++++ ..++++.|.+..+++.|++. ++|+ ++|+| +|+|++.+.+... .+++++
T Consensus 72 d~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~--------~~P~---~~lid~~G~i~~~~~g~~~---~~~l~~ 136 (152)
T 2lja_A 72 DKNKKAWENMVTKDQL-KGIQLHMGTDRTFMDAYLIN--------GIPR---FILLDRDGKIISANMTRPS---DPKTAE 136 (152)
T ss_dssp CSCHHHHHHHHHHHTC-CSEEEECSSCTHHHHHTTCC--------SSCC---EEEECTTSCEEESSCCCTT---CHHHHH
T ss_pred cCcHHHHHHHHHhcCC-CCceeecCcchhHHHHcCcC--------CCCE---EEEECCCCeEEEccCCCCC---HHHHHH
Confidence 75 5788999999987 23578899999999999987 5665 89999 9999998765433 356666
Q ss_pred HHhc
Q 038822 158 ILKS 161 (162)
Q Consensus 158 il~~ 161 (162)
+|+.
T Consensus 137 ~l~~ 140 (152)
T 2lja_A 137 KFNE 140 (152)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 74
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.93 E-value=2.4e-26 Score=157.69 Aligned_cols=134 Identities=14% Similarity=0.136 Sum_probs=114.5
Q ss_pred CCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC---
Q 038822 4 IAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN--- 80 (162)
Q Consensus 4 l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d--- 80 (162)
+++|+++|+|++... +.+|+.++++++ +||++||.|| ++|||.|..+ ++.+++++++++++ + .+++|+.+
T Consensus 1 l~~g~~~P~f~~~~~--~~~g~~~~~~~~-~gk~~lv~f~-~~~C~~C~~~-~~~l~~l~~~~~~~-~-~~~~v~~~~~~ 73 (148)
T 2b5x_A 1 MKLRQPMPELTGEKA--WLNGEVTREQLI-GEKPTLIHFW-SISCHLCKEA-MPQVNEFRDKYQDQ-L-NVVAVHMPRSE 73 (148)
T ss_dssp CCTTCBCCCCCCCSE--EESCCCCHHHHT-TTSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTTT-S-EEEEEECCCST
T ss_pred CCCCCCCCCCccccc--cccCcccchhhc-CCCEEEEEEE-cCCCHHHHHH-hHHHHHHHHHhcCC-c-EEEEEEcCCCc
Confidence 579999999999311 678999999997 8999999998 8999999997 99999999999876 8 99999986
Q ss_pred ---CHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHH
Q 038822 81 ---DPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSAD 156 (162)
Q Consensus 81 ---~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~ 156 (162)
+++..++|.+++++ +|+++.|.+..+++.|++. ++|+ ++++| +|+|++.+.+.... ++++
T Consensus 74 ~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~v~--------~~P~---~~lid~~G~i~~~~~g~~~~---~~l~ 137 (148)
T 2b5x_A 74 DDLDPGKIKETAAEHDI--TQPIFVDSDHALTDAFENE--------YVPA---YYVFDKTGQLRHFQAGGSGM---KMLE 137 (148)
T ss_dssp TTSSHHHHHHHHHHTTC--CSCEEECSSCHHHHHTCCC--------CSSE---EEEECTTCBEEEEEESCSTT---HHHH
T ss_pred cccCHHHHHHHHHHcCC--CcceEECCchhHHHHhCCC--------CCCE---EEEECCCCcEEEEecCCCCH---HHHH
Confidence 68999999999998 9999999999999999997 5554 89998 99999998875332 4455
Q ss_pred HHHh
Q 038822 157 DILK 160 (162)
Q Consensus 157 ~il~ 160 (162)
+.|+
T Consensus 138 ~~l~ 141 (148)
T 2b5x_A 138 KRVN 141 (148)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
No 75
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.93 E-value=1.5e-26 Score=160.38 Aligned_cols=133 Identities=26% Similarity=0.397 Sum_probs=116.2
Q ss_pred CC-CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEc
Q 038822 1 MA-PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISV 79 (162)
Q Consensus 1 m~-~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~ 79 (162)
|+ .+++|+++|+|+++ +.+|+.++++++ + |++||+|| ++|||.|..+ ++.++++++++ ++ .+++|+.
T Consensus 1 m~~~l~~g~~~p~f~l~----~~~g~~~~l~~~-~-k~vll~f~-~~~C~~C~~~-~~~l~~l~~~~---~v-~~v~v~~ 68 (154)
T 3ia1_A 1 MSLAVKPGEPLPDFLLL----DPKGQPVTPATV-S-KPAVIVFW-ASWCTVCKAE-FPGLHRVAEET---GV-PFYVISR 68 (154)
T ss_dssp ---CCCSBEECCCCCEE----CTTSCEECTTTS-C-SSEEEEEE-CTTCHHHHHH-HHHHHHHHHHH---CC-CEEEEEC
T ss_pred CCccCCCCCcCCceEEE----CCCCCEechHHc-C-CeEEEEEE-cccChhHHHH-HHHHHHHHHHc---CC-eEEEEeC
Confidence 45 78999999999999 899999999997 7 98999998 8999999998 99999999999 78 9999999
Q ss_pred ---CCHHHHHHHHHhCCCCCceEEEEc---CCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCccee
Q 038822 80 ---NDPFVMKAWAKTFPKNKSVKFLAD---GSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTV 152 (162)
Q Consensus 80 ---d~~~~~~~~~~~~~~~~~~~~l~D---~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~ 152 (162)
++++..++|.+++++ +|+++.| .+..+++.||+. ++| +++|+| +|+|++.+.+....
T Consensus 69 d~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~v~--------~~P---~~~lid~~G~i~~~~~g~~~~--- 132 (154)
T 3ia1_A 69 EPRDTREVVLEYMKTYPR--FIPLLASDRDRPHEVAARFKVL--------GQP---WTFVVDREGKVVALFAGRAGR--- 132 (154)
T ss_dssp CTTCCHHHHHHHHTTCTT--EEECBCCSSCCHHHHHTTSSBC--------SSC---EEEEECTTSEEEEEEESBCCH---
T ss_pred CCcccHHHHHHHHHHcCC--CcccccccccchHHHHHHhCCC--------ccc---EEEEECCCCCEEEEEcCCCCH---
Confidence 889999999999998 9999998 678999999987 455 489998 99999999866443
Q ss_pred CCHHHHHhc
Q 038822 153 SSADDILKS 161 (162)
Q Consensus 153 ~~~~~il~~ 161 (162)
+++++.|++
T Consensus 133 ~~l~~~l~~ 141 (154)
T 3ia1_A 133 EALLDALLL 141 (154)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 666666654
No 76
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.93 E-value=2.2e-26 Score=163.14 Aligned_cols=133 Identities=17% Similarity=0.257 Sum_probs=107.4
Q ss_pred CCCCCCCC-CeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCC-CCCcCCHhHHHHhHHHHHh--CCCCeEEEEEc
Q 038822 4 IAVGDPLP-DGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTP-TCSLKHVPGFIEKADELQS--KGVDEILCISV 79 (162)
Q Consensus 4 l~~G~~~P-~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp-~C~~~~~~~l~~~~~~~~~--~~~~~v~~is~ 79 (162)
+.+|+++| +|+++ +.+|++++|+++ +||++||+|| ++||| +|..+ ++.|+++++++++ .++ ++++||.
T Consensus 1 m~~G~~~P~~f~l~----d~~G~~v~l~~~-~Gk~vll~F~-~t~C~~~C~~~-~~~l~~~~~~~~~~~~~~-~vv~is~ 72 (170)
T 3me7_A 1 MSLGTYVPGDITLV----DSYGNEFQLKNL-KGKPIILSPI-YTHCRAACPLI-TKSLLKVIPKLGTPGKDF-WVITFTF 72 (170)
T ss_dssp -CTTCBCCTTCEEE----ETTCCEEEGGGG-TTSCEEEEEE-CTTCCSHHHHH-HHHHHTTHHHHCCBTTTB-EEEEEEC
T ss_pred CCCCCcCCCCeEEE----cCCcCEEchHHh-CCCEEEEEEE-CCCCCchhHHH-HHHHHHHHHHhhhcCCce-EEEEEEC
Confidence 46899999 99999 899999999998 8999999998 78998 69998 9999999999975 458 9999997
Q ss_pred C---CHHHHHHHHHhCCCCC-ceEEEE--c--CCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeec
Q 038822 80 N---DPFVMKAWAKTFPKNK-SVKFLA--D--GSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVES 146 (162)
Q Consensus 80 d---~~~~~~~~~~~~~~~~-~~~~l~--D--~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~ 146 (162)
| +++.+++|.++++... .|.++. | ...++++.||+..... +++....+.+||+| +|+|++++.+.
T Consensus 73 d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~lID~~G~i~~~~~g~ 146 (170)
T 3me7_A 73 DPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTA--GNDFIHPNVVVVLSPELQIKDYIYGV 146 (170)
T ss_dssp CTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEEE--TTEEECCCEEEEECTTSBEEEEEESS
T ss_pred CCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEecC--CCccccCceEEEECCCCeEEEEEeCC
Confidence 5 7899999999999732 355543 3 3378999998765321 22333456799999 99999998765
No 77
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.93 E-value=5.9e-26 Score=158.78 Aligned_cols=139 Identities=22% Similarity=0.237 Sum_probs=115.6
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCC-
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVND- 81 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~- 81 (162)
.+.+|+++|+|++. +.+|+.++++++ +||++||+|| ++|||.|..+ ++.++++++++++.++ .+++|+.|+
T Consensus 7 ~~~~g~~~p~~~l~----~~~g~~~~l~~~-~gk~vlv~f~-~~~C~~C~~~-~~~l~~l~~~~~~~~v-~~v~v~~d~~ 78 (165)
T 3or5_A 7 ADARPTPAPSFSGV----TVDGKPFSSASL-KGKAYIVNFF-ATWCPPCRSE-IPDMVQVQKTWASRGF-TFVGIAVNEQ 78 (165)
T ss_dssp CCCCCCBCCCCEEE----CTTSCEEEGGGG-TTCEEEEEEE-CTTSHHHHHH-HHHHHHHHHHHTTTTE-EEEEEECSCC
T ss_pred hhcCCCCCCCceee----CCCCCEechhHc-CCCEEEEEEE-cCcCHHHHHH-HHHHHHHHHHhccCCe-EEEEEECCCC
Confidence 57899999999999 899999999997 8999999998 9999999998 9999999999998889 999999875
Q ss_pred HHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHHHh
Q 038822 82 PFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
.+..++|.+++++ +|+++.|.+ .+.+.|+..... ...++| .++|+| +|+|++.+.+.... +++++.|+
T Consensus 79 ~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~--~i~~~P---~~~lid~~G~i~~~~~g~~~~---~~l~~~l~ 147 (165)
T 3or5_A 79 LPNVKNYMKTQGI--IYPVMMATP-ELIRAFNGYIDG--GITGIP---TSFVIDASGNVSGVIVGPRSK---ADFDRIVK 147 (165)
T ss_dssp HHHHHHHHHHHTC--CSCEEECCH-HHHHHHHTTSTT--CSCSSS---EEEEECTTSBEEEEECSCCCH---HHHHHHHH
T ss_pred HHHHHHHHHHcCC--CCceEecCH-HHHHHHhhhhcc--CCCCCC---eEEEECCCCcEEEEEcCCCCH---HHHHHHHH
Confidence 8889999999999 999999976 888999543210 011344 589998 99999998765432 55555554
No 78
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.93 E-value=4.5e-26 Score=155.76 Aligned_cols=132 Identities=12% Similarity=0.164 Sum_probs=113.0
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC--
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN-- 80 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d-- 80 (162)
.+.+|+++|+|+++ +.+|+.+++++ +||+++|.|| ++|||.|+.+ ++.+.++++++++.++ .+++|+.+
T Consensus 8 ~~~~g~~~p~~~l~----~~~g~~~~l~~--~gk~~ll~f~-~~~C~~C~~~-~~~l~~~~~~~~~~~~-~~v~v~~d~~ 78 (145)
T 3erw_A 8 EEKQPAVPAVFLMK----TIEGEDISIPN--KGQKTILHFW-TSWCPPCKKE-LPQFQSFYDAHPSDSV-KLVTVNLVNS 78 (145)
T ss_dssp ----CCSCCEEEEE----CTTSCEEEESC--TTSEEEEEEE-CSSCHHHHHH-HHHHHHHHHHCCCSSE-EEEEEECGGG
T ss_pred cccCCCcCCCceee----cCCCCEEeHHH--CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHcCCCCE-EEEEEEccCC
Confidence 57899999999999 89999999999 7999999999 9999999998 9999999999987788 99999985
Q ss_pred --CHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHH
Q 038822 81 --DPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADD 157 (162)
Q Consensus 81 --~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~ 157 (162)
+++..++|.+++++ +|+++.|.+..+++.|++. ++| +++|+| +|+|++.+.+.... +++.+
T Consensus 79 ~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~v~--------~~P---~~~lid~~G~i~~~~~g~~~~---~~l~~ 142 (145)
T 3erw_A 79 EQNQQVVEDFIKANKL--TFPIVLDSKGELMKEYHII--------TIP---TSFLLNEKGEIEKTKIGPMTA---EQLKE 142 (145)
T ss_dssp SSCHHHHHHHHHHTTC--CSCEEECSSSHHHHHTTCC--------EES---EEEEECTTCCEEEEEESCCCH---HHHHH
T ss_pred cCCHHHHHHHHHHcCC--ceeEEEcCchhHHHhcCcC--------ccC---eEEEEcCCCcEEEEEcCCcCH---HHHHH
Confidence 78999999999999 9999999999999999987 455 489998 99999998865332 44554
Q ss_pred HH
Q 038822 158 IL 159 (162)
Q Consensus 158 il 159 (162)
+|
T Consensus 143 ~l 144 (145)
T 3erw_A 143 WT 144 (145)
T ss_dssp HH
T ss_pred hh
Confidence 44
No 79
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.93 E-value=5.6e-26 Score=163.56 Aligned_cols=123 Identities=18% Similarity=0.201 Sum_probs=109.5
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCe-EEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEc--
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKK-VILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISV-- 79 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~-vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~-- 79 (162)
.+.+|+++|+|+++. +.+|++++|+++ +||+ +||+|| ++|||.|+.+ ++.|++++++++++++ .+++|+.
T Consensus 17 ~~~~g~~~p~f~l~~---~~~G~~~~l~~~-~gk~~vlv~F~-a~~C~~C~~~-~~~l~~l~~~~~~~~v-~vv~v~~d~ 89 (196)
T 2ywi_A 17 MFPLGKQAPPFALTN---VIDGNVVRLEDV-KSDAATVIMFI-CNHCPFVKHV-QHELVRLANDYMPKGV-SFVAINSND 89 (196)
T ss_dssp CCCTTCBCCCCEEEE---TTTCCEEEHHHH-CCSSEEEEEEC-CSSCHHHHHH-HHHHHHHHHHHGGGTC-EEEEEECSC
T ss_pred CCCcCCcCCceeeee---cCCCCEEeHHHh-CCCCeEEEEEe-CCCCccHHHH-HHHHHHHHHHHHhCCc-EEEEEECCc
Confidence 478999999999971 578999999998 8985 777777 8999999998 9999999999998899 9999998
Q ss_pred ------CCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEee
Q 038822 80 ------NDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVE 145 (162)
Q Consensus 80 ------d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~ 145 (162)
++++..++|.+++++ +|+++.|.++.+++.|++. ++| .+||+| +|+|++.+..
T Consensus 90 ~~~~~~d~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~v~--------~~P---~~~lid~~G~i~~~~~~ 149 (196)
T 2ywi_A 90 AEQYPEDSPENMKKVAEELGY--PFPYLYDETQEVAKAYDAA--------CTP---DFYIFDRDLKCVYRGQL 149 (196)
T ss_dssp TTTCGGGSHHHHHHHHHHHTC--CSCEEECSSCHHHHHHTCC--------EES---EEEEEETTCBEEEEECS
T ss_pred cccccccCHHHHHHHHHHcCC--CceEEECCchHHHHHhCCC--------CCC---eEEEEcCCCeEEEcccc
Confidence 678999999999998 9999999999999999986 344 488888 9999999653
No 80
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=99.93 E-value=5.6e-25 Score=157.77 Aligned_cols=157 Identities=36% Similarity=0.613 Sum_probs=130.7
Q ss_pred CCCCCCCC--CeeeeeeecC---------CCceeEehhhhc-CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHH-HhCC
Q 038822 4 IAVGDPLP--DGTLVYFDEQ---------DQLQQVSVHSLA-AGKKVILFGVPGDFTPTCSLKHVPGFIEKADEL-QSKG 70 (162)
Q Consensus 4 l~~G~~~P--~f~l~~~~~~---------~~g~~~~l~~~~-~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~-~~~~ 70 (162)
..+|+++| |+++..|.-+ ..-+++++++.+ +||+|||+++|+.++|.|..+|+|.+.+.++++ +++|
T Consensus 26 ~~v~~~~P~gdv~f~yip~~~~~~~~~~c~~P~~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k~kG 105 (199)
T 4h86_A 26 DLVNKKFPAGDYKFQYIAISQSDADSESCKMPQTVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKEKE 105 (199)
T ss_dssp TTTTSBCCCTTCEEEECCCCSSSTTSGGGTSCEEEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHHHSC
T ss_pred HHhCCCCCCCCceEEEecCCccccccccCCCCeeeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHHhcC
Confidence 67999999 5666555311 223678898875 699999999999999999998899999999876 7889
Q ss_pred CCeEEEEEcCCHHHHHHHHHhCCCC--CceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEcCCeEEEEEeec--
Q 038822 71 VDEILCISVNDPFVMKAWAKTFPKN--KSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVDDLKVKAANVES-- 146 (162)
Q Consensus 71 ~~~v~~is~d~~~~~~~~~~~~~~~--~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~-- 146 (162)
+++|++||+|++..+++|.+..+.. ..+++++|+++++++.||+..+.. +.+.++.|+.+|++||+|++.++.+
T Consensus 106 vd~I~ciSVND~FVm~AW~k~~~~~~~~~i~~laD~~~eftkalGl~~~~~--~gg~RS~Rya~IVdDGvV~~~~vE~~p 183 (199)
T 4h86_A 106 VDQVIVVTVDNPFANQAWAKSLGVKDTTHIKFASDPGCAFTKSIGFELAVG--DGVYWSGRWAMVVENGIVTYAAKETNP 183 (199)
T ss_dssp CCEEEEEESSCHHHHHHHHHHTTCCCCSSEEEEECGGGHHHHHTTCEEEEE--TTEEEECSEEEEEETTEEEEEEECSST
T ss_pred CcEEEEEEcCCHHHHHHHHHHhcccccccccccCCcchHHHHhcCceeecC--CCcceeeEEEEEEECCEEEEEEEeCCC
Confidence 8789999999999999999998753 269999999999999999976532 3345688999999999999999986
Q ss_pred CCcceeCCHHHHHhcC
Q 038822 147 GGDFTVSSADDILKSL 162 (162)
Q Consensus 147 ~~~~~~~~~~~il~~l 162 (162)
+.+.+++.++.+|++|
T Consensus 184 g~~~~vS~ae~vL~~L 199 (199)
T 4h86_A 184 GTDVTVSSVESVLAHL 199 (199)
T ss_dssp TTCCSTTSHHHHHTTC
T ss_pred CCCCcccCHHHHHhcC
Confidence 2356789999999987
No 81
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.93 E-value=1.1e-25 Score=156.55 Aligned_cols=121 Identities=17% Similarity=0.110 Sum_probs=104.9
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCH
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDP 82 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~ 82 (162)
....|+++|+|+++ +.+|++++|+++ +||++||+|| ++|||.|+.+ ++.|++++++++++++ +|++|+.|+.
T Consensus 8 ~~~~g~~~p~f~l~----~~~G~~~~l~~~-~gk~vll~F~-a~wC~~C~~~-~~~l~~l~~~~~~~~~-~vv~i~~d~~ 79 (152)
T 2lrt_A 8 DKIKEASIIDIQLK----DLKGNTRSLTDL-KGKVVLIDFT-VYNNAMSAAH-NLALRELYNKYASQGF-EIYQISLDGD 79 (152)
T ss_dssp SSSCTTCSCCCCEE----BTTSCEECTTTG-GGSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHGGGTE-EEEEEECSCC
T ss_pred hhccCCCCCCeEEE----cCCCCEEeHHHh-CCCEEEEEEE-cCCChhhHHH-HHHHHHHHHHhccCCe-EEEEEEccCC
Confidence 45789999999999 899999999997 8999999999 6899999998 9999999999998899 9999999764
Q ss_pred -HHHHHHHHhCCCCCceEEEEcCCch---HHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeec
Q 038822 83 -FVMKAWAKTFPKNKSVKFLADGSAK---YTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVES 146 (162)
Q Consensus 83 -~~~~~~~~~~~~~~~~~~l~D~~~~---~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~ 146 (162)
+..++|.+ ++ +|+++.|+++. +++.||+. ++| ++||+| +|+|++.+.+.
T Consensus 80 ~~~~~~~~~--~~--~~~~~~d~~~~~~~~~~~~~v~--------~~P---~~~lid~~G~i~~~~~g~ 133 (152)
T 2lrt_A 80 EHFWKTSAD--NL--PWVCVRDANGAYSSYISLYNVT--------NLP---SVFLVNRNNELSARGENI 133 (152)
T ss_dssp HHHHHHHHT--TC--SSEEEECSSGGGCHHHHHHTCC--------SCS---EEEEEETTTEEEEETTTC
T ss_pred HHHHHHHHh--CC--CceEEECCCCcchHHHHHcCcc--------cCc---eEEEECCCCeEEEecCCH
Confidence 44555654 35 89999999987 99999987 455 489998 99999988753
No 82
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.93 E-value=1.5e-25 Score=162.65 Aligned_cols=149 Identities=18% Similarity=0.134 Sum_probs=110.6
Q ss_pred CCCCCCCC--CCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCC-CCcCCHhHHHHhHHHHHhC---CCCeEEE
Q 038822 3 PIAVGDPL--PDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPT-CSLKHVPGFIEKADELQSK---GVDEILC 76 (162)
Q Consensus 3 ~l~~G~~~--P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~-C~~~~~~~l~~~~~~~~~~---~~~~v~~ 76 (162)
...+|+++ |+|+++ +.+|++++|+++ +||++||+|| ++|||. |+.+ ++.|+++++++.++ ++ +|++
T Consensus 12 ~~~~g~~~~~p~f~l~----d~~G~~v~l~~~-~Gk~vlv~F~-at~C~~vC~~~-~~~l~~l~~~~~~~~~~~v-~vv~ 83 (200)
T 2b7k_A 12 NRGYGKPSLGGPFHLE----DMYGNEFTEKNL-LGKFSIIYFG-FSNCPDICPDE-LDKLGLWLNTLSSKYGITL-QPLF 83 (200)
T ss_dssp ----CCCCCCCCCEEE----ETTSCEEEGGGG-TTSCEEEEEE-CTTCCSHHHHH-HHHHHHHHHHHHHHHCCCC-EEEE
T ss_pred HhccCCCCcCCCEEEE----cCCCCEEeHHHc-CCCEEEEEEE-CCCCcchhHHH-HHHHHHHHHHHHHhhCCce-EEEE
Confidence 46789986 999999 899999999997 8999999888 899997 9998 99999999999853 78 9999
Q ss_pred EEcC----CHHHHHHHHHhCCCCCceEEEEc---CCchHHHHcCCccccc-----cCCCCccceeEEEEEc-CCeEEEEE
Q 038822 77 ISVN----DPFVMKAWAKTFPKNKSVKFLAD---GSAKYTHALGLELDLS-----EKGLGTQSRRFALLVD-DLKVKAAN 143 (162)
Q Consensus 77 is~d----~~~~~~~~~~~~~~~~~~~~l~D---~~~~~~~~~gv~~~~~-----~~~~~~~~~~~~~ii~-~g~i~~~~ 143 (162)
||.| +++.+++|.++++. +|+.+.+ ..+.+++.||+..... ...+...+.+.+||+| +|+|++.+
T Consensus 84 Is~D~~~d~~~~~~~~~~~~~~--~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~ 161 (200)
T 2b7k_A 84 ITCDPARDSPAVLKEYLSDFHP--SILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDAL 161 (200)
T ss_dssp EESCTTTCCHHHHHHHHTTSCT--TCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEE
T ss_pred EECCCCCCCHHHHHHHHHHcCC--CceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEe
Confidence 9987 68999999999998 8988874 3478999999973210 1111122335689999 99999998
Q ss_pred eecCC-cceeCCHHHHHhc
Q 038822 144 VESGG-DFTVSSADDILKS 161 (162)
Q Consensus 144 ~~~~~-~~~~~~~~~il~~ 161 (162)
.+... ....+.++++|+.
T Consensus 162 ~g~~~~~~~~~~i~~~l~~ 180 (200)
T 2b7k_A 162 GRNYDEKTGVDKIVEHVKS 180 (200)
T ss_dssp CTTCCTTHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH
Confidence 76522 2123344445443
No 83
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.88 E-value=1.1e-27 Score=167.27 Aligned_cols=136 Identities=19% Similarity=0.211 Sum_probs=115.3
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHH-hHHHHH-hCCCCeEEEEEcC
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIE-KADELQ-SKGVDEILCISVN 80 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~-~~~~~~-~~~~~~v~~is~d 80 (162)
.+++|+++|+|+++ +.+|++++++++ +||+++|+|| ++|||.|+.+ ++.|.+ ++++++ +.++ .+++|+.|
T Consensus 6 ~l~~g~~~p~f~l~----~~~g~~~~l~~~-~gk~vll~f~-a~~C~~C~~~-~~~l~~~l~~~~~~~~~~-~vv~v~~d 77 (159)
T 2ls5_A 6 IVRIGEMAPDFTIT----LTDGKQVTLSSL-RGKVVMLQFT-ASWCGVCRKE-MPFIEKDIWLKHKDNADF-ALIGIDRD 77 (159)
Confidence 47899999999999 899999999997 8999999888 8999999998 999998 999998 7788 89999987
Q ss_pred CH-HHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHH
Q 038822 81 DP-FVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDI 158 (162)
Q Consensus 81 ~~-~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~i 158 (162)
+. +..++|.+++++ +|+++.|+++.+++.|++... ++| .++|+| +|+|++.+.+... .+++++
T Consensus 78 ~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~------~~P---~~~lid~~G~i~~~~~g~~~----~~l~~~ 142 (159)
T 2ls5_A 78 EPLEKVLAFAKSTGV--TYPLGLDPGADIFAKYALRDA------GIT---RNVLIDREGKIVKLTRLYNE----EEFASL 142 (159)
Confidence 54 668899999998 999999999999999997521 455 488888 9999999876322 445555
Q ss_pred Hhc
Q 038822 159 LKS 161 (162)
Q Consensus 159 l~~ 161 (162)
++.
T Consensus 143 l~~ 145 (159)
T 2ls5_A 143 VQQ 145 (159)
Confidence 543
No 84
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.93 E-value=1.9e-26 Score=162.49 Aligned_cols=147 Identities=18% Similarity=0.172 Sum_probs=116.0
Q ss_pred CCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCC-CCcCCHhHHHHhHHHHHhC---CCCeEEEEEc
Q 038822 4 IAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPT-CSLKHVPGFIEKADELQSK---GVDEILCISV 79 (162)
Q Consensus 4 l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~-C~~~~~~~l~~~~~~~~~~---~~~~v~~is~ 79 (162)
..+|+++|+|+++ +.+| +++|+++ +||++||+|| ++|||. |+.+ ++.|++++++++++ ++ +|++|+.
T Consensus 10 ~~~G~~~p~f~l~----~~~g-~~~l~~~-~gk~vll~f~-~~~C~~~C~~~-~~~l~~~~~~~~~~~~~~v-~vv~is~ 80 (172)
T 2k6v_A 10 RLLNPKPVDFALE----GPQG-PVRLSQF-QDKVVLLFFG-FTRCPDVCPTT-LLALKRAYEKLPPKAQERV-QVIFVSV 80 (172)
T ss_dssp EEEEEEECCCEEE----CSSS-EEEGGGS-TTSEEEEEEE-CTTCSSHHHHH-HHHHHHHHTTSCHHHHTTE-EEEEEES
T ss_pred cccCCCCCCeEEE----cCCC-CCcHHHh-CCCEEEEEEE-CCCCcchhHHH-HHHHHHHHHHhhhhccCCE-EEEEEEE
Confidence 4578999999999 8999 9999997 9999988888 889997 9998 99999999999865 78 9999996
Q ss_pred C----CHHHHHHHHHhCCCCCceEEEEcCC---chHHHHcCCcccccc----CCCCccceeEEEEEcCCeEEEEEeecCC
Q 038822 80 N----DPFVMKAWAKTFPKNKSVKFLADGS---AKYTHALGLELDLSE----KGLGTQSRRFALLVDDLKVKAANVESGG 148 (162)
Q Consensus 80 d----~~~~~~~~~~~~~~~~~~~~l~D~~---~~~~~~~gv~~~~~~----~~~~~~~~~~~~ii~~g~i~~~~~~~~~ 148 (162)
| +++.+++|.++++. +|++++|++ .++++.||+...... ..++....|++||+|+|+|++.+.+..
T Consensus 81 d~~~d~~~~~~~~~~~~~~--~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i~~~~~g~~- 157 (172)
T 2k6v_A 81 DPERDPPEVADRYAKAFHP--SFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLVLLYSPDK- 157 (172)
T ss_dssp CTTTCCHHHHHHHHHHHCT--TEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEEEEECHHH-
T ss_pred CCCCCCHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEEEEEECCCC-
Confidence 5 68999999999998 999999998 689999998643211 111222335577777999999998653
Q ss_pred cceeCCHHHHHhcC
Q 038822 149 DFTVSSADDILKSL 162 (162)
Q Consensus 149 ~~~~~~~~~il~~l 162 (162)
..+.+++.+.|++|
T Consensus 158 ~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 158 AEATDRVVADLQAL 171 (172)
T ss_dssp HTCHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHh
Confidence 11235555555543
No 85
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.92 E-value=3.4e-25 Score=154.87 Aligned_cols=128 Identities=13% Similarity=0.136 Sum_probs=104.8
Q ss_pred CCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCC-CCcCCHhHHHHhHHHHHh----CCCCeEEEEEcCC--
Q 038822 9 PLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPT-CSLKHVPGFIEKADELQS----KGVDEILCISVND-- 81 (162)
Q Consensus 9 ~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~-C~~~~~~~l~~~~~~~~~----~~~~~v~~is~d~-- 81 (162)
.+|+|+++ +.+|++++|+++ +||++||+|| ++|||. |+.+ ++.|+++++++++ .++ ++++||.|+
T Consensus 2 ~ap~f~l~----~~~G~~~~l~~~-~gk~vll~f~-~~~C~~~C~~~-~~~l~~l~~~~~~~~~~~~~-~vv~vs~d~~~ 73 (164)
T 2ggt_A 2 LGGPFSLT----THTGERKTDKDY-LGQWLLIYFG-FTHCPDVCPEE-LEKMIQVVDEIDSITTLPDL-TPLFISIDPER 73 (164)
T ss_dssp CCCCCEEE----ETTSCEEEGGGG-TTCEEEEEEE-CTTCSSHHHHH-HHHHHHHHHHHHHSSSSCCE-EEEEEESCTTT
T ss_pred CCCCeEEE----eCCCCEEeHHHc-CCCEEEEEEE-eCCCCchhHHH-HHHHHHHHHHHhhccCCCcE-EEEEEEeCCCC
Confidence 58999999 899999999997 8999999888 799997 9998 9999999999987 488 999999874
Q ss_pred --HHHHHHHHHhCCCCCceEEEE---cCCchHHHHcCCccccc----cCCCCccceeEEEEEc-CCeEEEEEeec
Q 038822 82 --PFVMKAWAKTFPKNKSVKFLA---DGSAKYTHALGLELDLS----EKGLGTQSRRFALLVD-DLKVKAANVES 146 (162)
Q Consensus 82 --~~~~~~~~~~~~~~~~~~~l~---D~~~~~~~~~gv~~~~~----~~~~~~~~~~~~~ii~-~g~i~~~~~~~ 146 (162)
++.+++|.++++. +|+++. |..+.+++.||+...+. ...+.+...+.+||+| +|+|++.+.+.
T Consensus 74 d~~~~~~~~~~~~~~--~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~ 146 (164)
T 2ggt_A 74 DTKEAIANYVKEFSP--KLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQN 146 (164)
T ss_dssp CCHHHHHHHHHTTCS--SCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETT
T ss_pred CCHHHHHHHHHHcCC--CeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCC
Confidence 8899999999998 999994 55678999999874320 0000011223688998 99999998765
No 86
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.92 E-value=3.1e-26 Score=161.99 Aligned_cols=132 Identities=14% Similarity=0.099 Sum_probs=93.6
Q ss_pred CCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEc-------
Q 038822 7 GDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISV------- 79 (162)
Q Consensus 7 G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~------- 79 (162)
|..+|+|+++ +.+|++++|+++ +||++||+|| ++|||.|+ + ++.|++++++++++++ .|++|+.
T Consensus 9 ~~~~~~f~l~----d~~G~~~~l~~~-~Gk~vll~F~-a~wC~~C~-~-~~~l~~l~~~~~~~~v-~vv~vs~d~~~~~~ 79 (171)
T 3cmi_A 9 MSEFYKLAPV----DKKGQPFPFDQL-KGKVVLIVNV-ASKCGFTP-Q-YKELEALYKRYKDEGF-TIIGFPCNQFGHQE 79 (171)
T ss_dssp -CGGGGCCCB----BTTSCBCCGGGG-TTCEEEEEEE-ESSSCCHH-H-HHHHHHHHHHHGGGTE-EEEEEEECSCC---
T ss_pred hhheeeeEEE----cCCCCEecHHHc-CCCEEEEEEE-ecCCCcch-h-HHHHHHHHHHhccCCe-EEEEEECcccCCCC
Confidence 5689999999 999999999997 9999999998 89999999 9 9999999999998899 9999997
Q ss_pred -CCHHHHHHHH-HhCCCCCceEEEEcCC--ch-HHH--------HcCCccccccCCCCcc---ceeEEEEEc-CCeEEEE
Q 038822 80 -NDPFVMKAWA-KTFPKNKSVKFLADGS--AK-YTH--------ALGLELDLSEKGLGTQ---SRRFALLVD-DLKVKAA 142 (162)
Q Consensus 80 -d~~~~~~~~~-~~~~~~~~~~~l~D~~--~~-~~~--------~~gv~~~~~~~~~~~~---~~~~~~ii~-~g~i~~~ 142 (162)
++++..++|. +++++ +||++.|.+ +. ..+ .||+. ++| ..+.+||+| +|+|++.
T Consensus 80 ~d~~~~~~~~~~~~~~~--~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~--------~~P~i~~~~~~~lid~~G~i~~~ 149 (171)
T 3cmi_A 80 PGSDEEIAQFCQLNYGV--TFPIMKKIDVNGGNEDPVYKFLKSQKSGML--------GLRGIKWNFEKFLVDKKGKVYER 149 (171)
T ss_dssp ---------------CC--CSCBBCCCBSSSTTBCHHHHHHHHHSCCSS--------SCCSCCSTTCEEEECSSSCEEEE
T ss_pred CCCHHHHHHHHHhccCC--CceEEeeccCCCccchHHHHHHHhccCCcC--------CCCcccccceEEEECCCCCEEEE
Confidence 4677889999 99998 999998754 32 222 34543 334 011589998 9999999
Q ss_pred EeecCCcceeCCHHHHHh
Q 038822 143 NVESGGDFTVSSADDILK 160 (162)
Q Consensus 143 ~~~~~~~~~~~~~~~il~ 160 (162)
+.+.... +++++.|+
T Consensus 150 ~~g~~~~---~~l~~~i~ 164 (171)
T 3cmi_A 150 YSSLTKP---SSLSETIE 164 (171)
T ss_dssp ECTTSCG---GGGHHHHH
T ss_pred eCCCCCH---HHHHHHHH
Confidence 9865332 44544444
No 87
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.92 E-value=2.7e-25 Score=162.51 Aligned_cols=144 Identities=15% Similarity=0.025 Sum_probs=105.4
Q ss_pred CCCCCCCCCeeeeeeecCCC-ceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC--
Q 038822 4 IAVGDPLPDGTLVYFDEQDQ-LQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN-- 80 (162)
Q Consensus 4 l~~G~~~P~f~l~~~~~~~~-g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d-- 80 (162)
...++++|+|+++ +.+ |++++|+++ +||++||+|| ++|||.|+.+ +|.|++++++++++++ +|++|+.|
T Consensus 20 ~~~~~~~p~f~l~----~~~~G~~v~l~~~-~Gk~vlv~Fw-atwC~~C~~e-~p~l~~l~~~~~~~g~-~vv~v~~d~~ 91 (208)
T 2f8a_A 20 FQSMQSVYAFSAR----PLAGGEPVSLGSL-RGKVLLIENV-ASLGGTTVRD-YTQMNELQRRLGPRGL-VVLGFPCNQF 91 (208)
T ss_dssp --CCCCGGGCEEC----BTTCSSCEEGGGG-TTSEEEEEEE-CSSSTTHHHH-HHHHHHHHHHHGGGTE-EEEEEECCCS
T ss_pred hhhcCccCceEee----eCCCCCCccHHHc-CCCEEEEEEE-CCCCccHHHH-HHHHHHHHHHccCCCe-EEEEEECCcc
Confidence 3578899999999 888 999999998 9999888888 8999999998 9999999999998899 99999975
Q ss_pred ------CHHHHHHHHH------hCCCCCceEEEEcCC--ch----HHH----HcCCcc--------cc-----ccC-CCC
Q 038822 81 ------DPFVMKAWAK------TFPKNKSVKFLADGS--AK----YTH----ALGLEL--------DL-----SEK-GLG 124 (162)
Q Consensus 81 ------~~~~~~~~~~------~~~~~~~~~~l~D~~--~~----~~~----~~gv~~--------~~-----~~~-~~~ 124 (162)
+++.+++|++ ++++ +||+++|.+ +. +.+ .++... .. ... ..+
T Consensus 92 ~~~e~d~~~~i~~f~~~~~~~~~~~~--~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (208)
T 2f8a_A 92 GHQENAKNEEILNSLKYVRPGGGFEP--NFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRND 169 (208)
T ss_dssp TTTTCSCHHHHHHHHHHTSSCTTCCC--SSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTC
T ss_pred cccCCCCHHHHHHHHHhccccccccc--ceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCc
Confidence 5688999998 8888 999997643 32 222 222100 00 000 001
Q ss_pred ccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHHHh
Q 038822 125 TQSRRFALLVD-DLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 125 ~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
....|.+||+| +|+|++.+.+.... +++++.|+
T Consensus 170 i~~~p~tflID~~G~i~~~~~g~~~~---~~l~~~I~ 203 (208)
T 2f8a_A 170 VAWNFEKFLVGPDGVPLRRYSRRFQT---IDIEPDIE 203 (208)
T ss_dssp CCSTTCEEEECTTSCEEEEECTTSCG---GGGHHHHH
T ss_pred cccCceEEEEcCCCcEEEEeCCCCCH---HHHHHHHH
Confidence 21224599999 99999999865333 44444443
No 88
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.92 E-value=9.6e-26 Score=156.18 Aligned_cols=129 Identities=14% Similarity=0.153 Sum_probs=105.0
Q ss_pred CCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHH
Q 038822 10 LPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWA 89 (162)
Q Consensus 10 ~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~ 89 (162)
+|++.+.. ..+|++++|+++ +||++||+|| ++|||.|+.+ ++.|+++++++++.++ .|++|+.|+.+..++|.
T Consensus 3 ~pa~~~~~---~~~G~~~~l~~~-~gk~vlv~F~-a~wC~~C~~~-~~~l~~l~~~~~~~~v-~vv~v~~d~~~~~~~~~ 75 (151)
T 3raz_A 3 LSADELAG---WKDNTPQSLQSL-KAPVRIVNLW-ATWCGPCRKE-MPAMSKWYKAQKKGSV-DMVGIALDTSDNIGNFL 75 (151)
T ss_dssp ----CEEE---TTTCCEECGGGC-CSSEEEEEEE-CTTCHHHHHH-HHHHHHHHHTSCTTTE-EEEEEESSCHHHHHHHH
T ss_pred CCcchhhc---ccCCCEecHHHh-CCCEEEEEEE-cCcCHHHHHH-HHHHHHHHHHhccCCe-EEEEEECCChHHHHHHH
Confidence 44555541 268999999997 9999999888 9999999998 9999999999988889 99999999999999999
Q ss_pred HhCCCCCceEEEEcCC---chHHHHcC--CccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 90 KTFPKNKSVKFLADGS---AKYTHALG--LELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 90 ~~~~~~~~~~~l~D~~---~~~~~~~g--v~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+++++ +|+++.|.+ ..+++.|| +. ++| ++||+| +|+|++.+.+.... +++++.|++
T Consensus 76 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~--------~~P---~~~lid~~G~i~~~~~g~~~~---~~l~~~l~~ 137 (151)
T 3raz_A 76 KQTPV--SYPIWRYTGANSRNFMKTYGNTVG--------VLP---FTVVEAPKCGYRQTITGEVNE---KSLTDAVKL 137 (151)
T ss_dssp HHSCC--SSCEEEECCSCHHHHHHTTTCCSC--------CSS---EEEEEETTTTEEEECCSCCCH---HHHHHHHHH
T ss_pred HHcCC--CCceEecCccchHHHHHHhCCccC--------CCC---EEEEECCCCcEEEEECCCCCH---HHHHHHHHH
Confidence 99999 999998875 56888998 44 455 489998 99999998866443 556666554
No 89
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.92 E-value=3.7e-24 Score=151.74 Aligned_cols=134 Identities=15% Similarity=0.111 Sum_probs=104.3
Q ss_pred CCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCC-CCCcCCHhHHHHhHHHHHhCC--CCeEEEEEc-
Q 038822 4 IAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTP-TCSLKHVPGFIEKADELQSKG--VDEILCISV- 79 (162)
Q Consensus 4 l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp-~C~~~~~~~l~~~~~~~~~~~--~~~v~~is~- 79 (162)
..+|.++|+|+|+ |.+|++++|+++ +||++||+|| .+||| +|+.+ ++.|.++++.+++.+ + ++++||.
T Consensus 6 ~P~~~~~PdF~L~----d~~G~~v~l~d~-~Gk~vll~F~-~t~Cp~~Cp~~-~~~l~~l~~~~~~~~~~v-~~v~isvD 77 (170)
T 4hde_A 6 KPLNWDLETFQFT----NQDGKPFGTKDL-KGKVWVADFM-FTNCQTVCPPM-TANMAKLQKMAKEEKLDV-QFVSFSVD 77 (170)
T ss_dssp SCCCBCCCCCEEE----CTTSCEEEHHHH-TTSCEEEEEE-CTTCSSSHHHH-HHHHHHHHHHHHHTTCCC-EEEEEESC
T ss_pred cCCCCcCCCcEEE----CCCCCEEeHHHh-CCCEEEEEEE-CCCCCCcccHH-HHHHHHHHHhhhcccccc-eeEeeecC
Confidence 4579999999999 999999999998 9999999999 78998 79998 999999999997654 6 7889986
Q ss_pred ---CCHHHHHHHHHhCCCC-CceEEEEcCCch-H----HHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeec
Q 038822 80 ---NDPFVMKAWAKTFPKN-KSVKFLADGSAK-Y----THALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVES 146 (162)
Q Consensus 80 ---d~~~~~~~~~~~~~~~-~~~~~l~D~~~~-~----~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~ 146 (162)
|+++.+++|.++++.. .+|.++.+.+.+ + ...|+........ +.+.+.+.+||+| +|+|+..+.+.
T Consensus 78 p~~Dtp~~l~~y~~~~~~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~-~~~~H~~~~~liD~~G~i~~~~~g~ 153 (170)
T 4hde_A 78 PDLDKPENLKAFIQKFTEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPEN-GQVIHGTSFYLIDQNGKVMKKYSGI 153 (170)
T ss_dssp TTTCCHHHHHHHHTTTCSCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTT-SCCBCCCEEEEECTTSCEEEEEESS
T ss_pred cccccHHHHHHHHHHcCCCCCCceecCcccHHHHHHHHHhcccccccCCCC-ceEEeeeEEEEEcCCCeEEEEECCC
Confidence 5789999999998753 257788776532 2 2345554332222 2333446789999 99999988764
No 90
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.92 E-value=2e-25 Score=174.66 Aligned_cols=134 Identities=14% Similarity=0.132 Sum_probs=117.0
Q ss_pred CCCCCCCCCCee-----eeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEE
Q 038822 3 PIAVGDPLPDGT-----LVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCI 77 (162)
Q Consensus 3 ~l~~G~~~P~f~-----l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~i 77 (162)
.+.+|+++|+|+ +. +.+|++++|+++ +||++||+|| ++|||.|+.+ ++.|++++++++++++ .|++|
T Consensus 50 ~l~vG~~aPdF~~~~~wL~----d~dG~~vsLsdl-~GK~vLl~F~-atwC~~C~~~-~p~L~~l~~~~~~~~v-~vi~V 121 (352)
T 2hyx_A 50 QLESCGTAPDLKGITGWLN----TPGNKPIDLKSL-RGKVVLIDFW-AYSCINCQRA-IPHVVGWYQAYKDSGL-AVIGV 121 (352)
T ss_dssp SCCCCCBCCCCCSCCEEES----SGGGCCCCGGGG-TTSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHGGGTE-EEEEE
T ss_pred ccCCCCcCCCccccccccC----CCCCCEEcHHHh-CCCEEEEEEE-CCCChhHHHH-HHHHHHHHHHhhcCCe-EEEEE
Confidence 578999999999 77 889999999997 8999999998 7999999998 9999999999998889 99999
Q ss_pred Ec------CCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcc
Q 038822 78 SV------NDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDF 150 (162)
Q Consensus 78 s~------d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~ 150 (162)
+. ++++..++|.+++++ +|+++.|.+..+++.|++. ++| ++||+| +|+|++.+.+....
T Consensus 122 s~d~~~~~d~~~~~~~~~~~~~l--~fpv~~D~~~~l~~~ygV~--------~~P---t~~lID~~G~Iv~~~~G~~~~- 187 (352)
T 2hyx_A 122 HTPEYAFEKVPGNVAKGAANLGI--SYPIALDNNYATWTNYRNR--------YWP---AEYLIDATGTVRHIKFGEGDY- 187 (352)
T ss_dssp ECCSSGGGGCHHHHHHHHHHHTC--CSCEEECTTSHHHHHTTCC--------EES---EEEEECTTSBEEEEEESBCCH-
T ss_pred ECCcccccCCHHHHHHHHHHcCC--CccEEeCCcHHHHHHcCCC--------ccC---EEEEEeCCCeEEEEEcCCCCH-
Confidence 96 468999999999999 9999999999999999986 444 489998 99999999875332
Q ss_pred eeCCHHHHHh
Q 038822 151 TVSSADDILK 160 (162)
Q Consensus 151 ~~~~~~~il~ 160 (162)
+++++.|+
T Consensus 188 --~~l~~~I~ 195 (352)
T 2hyx_A 188 --NVTETLVR 195 (352)
T ss_dssp --HHHHHHHH
T ss_pred --HHHHHHHH
Confidence 44444443
No 91
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.92 E-value=1.5e-25 Score=159.85 Aligned_cols=144 Identities=10% Similarity=0.078 Sum_probs=105.1
Q ss_pred CCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEc----
Q 038822 4 IAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISV---- 79 (162)
Q Consensus 4 l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~---- 79 (162)
-.+|.++|+|+++ +.+|++++|+++ +||++||+|| ++|||+|+.+ +|.|++++++++++++ +|++|+.
T Consensus 12 ~~~~~~~p~f~l~----d~~G~~v~l~~~-~Gk~vlv~F~-atwC~~C~~~-~p~l~~l~~~~~~~~~-~vi~is~d~~~ 83 (180)
T 3kij_A 12 KPKINSFYAFEVK----DAKGRTVSLEKY-KGKVSLVVNV-ASDCQLTDRN-YLGLKELHKEFGPSHF-SVLAFPCNQFG 83 (180)
T ss_dssp CCCCCCGGGCEEE----BTTSCEEEGGGG-TTSEEEEEEE-CSSSTTHHHH-HHHHHHHHHHHTTTSE-EEEEEECCCST
T ss_pred cCCcCcccceEEe----cCCCCEecHHHc-CCCEEEEEEE-ecCCCCcHHH-HHHHHHHHHHhccCCe-EEEEEECCccc
Confidence 4689999999999 999999999998 9998888887 8999999998 9999999999999899 9999995
Q ss_pred ----CCHHHHHHHHHh-CCCCCceEEEEcCC--chHH-HHcCCccccccCCCCccc-eeEEEEEc-CCeEEEEEeecCCc
Q 038822 80 ----NDPFVMKAWAKT-FPKNKSVKFLADGS--AKYT-HALGLELDLSEKGLGTQS-RRFALLVD-DLKVKAANVESGGD 149 (162)
Q Consensus 80 ----d~~~~~~~~~~~-~~~~~~~~~l~D~~--~~~~-~~~gv~~~~~~~~~~~~~-~~~~~ii~-~g~i~~~~~~~~~~ 149 (162)
++++.+++|.++ +++ +|+++.+.+ +... ..|+.... ..+ +.|+ ...+||+| +|+|++.+.+....
T Consensus 84 ~~~~d~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~--~~~-~~p~~~~~~~lid~~G~i~~~~~g~~~~ 158 (180)
T 3kij_A 84 ESEPRPSKEVESFARKNYGV--TFPIFHKIKILGSEGEPAFRFLVD--SSK-KEPRWNFWKYLVNPEGQVVKFWRPEEPI 158 (180)
T ss_dssp TCCCSCHHHHHHHHHHHHCC--CSCBBCCCCCSSTTCCHHHHHHHH--HHT-CCCSSTTCEEEECTTSCEEEEECTTCCG
T ss_pred cCCCCCHHHHHHHHHHhcCC--CCceeeeeeccCccccHHHHHHHh--cCC-CCccccceEEEECCCCCEEEEECCCCCH
Confidence 478999999999 998 999976433 2211 11111100 000 1110 01178888 99999999876332
Q ss_pred -ceeCCHHHHHh
Q 038822 150 -FTVSSADDILK 160 (162)
Q Consensus 150 -~~~~~~~~il~ 160 (162)
.-.+.++++|+
T Consensus 159 ~~l~~~i~~lL~ 170 (180)
T 3kij_A 159 EVIRPDIAALVR 170 (180)
T ss_dssp GGTHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 11234444443
No 92
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.92 E-value=1.7e-24 Score=152.43 Aligned_cols=127 Identities=15% Similarity=0.170 Sum_probs=105.0
Q ss_pred CCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCC-CCcCCHhHHHHhHHHHHh----CCCCeEEEEEcC----C
Q 038822 11 PDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPT-CSLKHVPGFIEKADELQS----KGVDEILCISVN----D 81 (162)
Q Consensus 11 P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~-C~~~~~~~l~~~~~~~~~----~~~~~v~~is~d----~ 81 (162)
|+|+++ +.+|++++++++ +||++||+|| ++|||. |+.+ ++.|+++++++++ .++ +|++|+.| +
T Consensus 7 p~f~l~----~~~G~~~~l~~~-~gk~vll~F~-~~~C~~~C~~~-~~~l~~l~~~~~~~~~~~~v-~vv~is~d~~~d~ 78 (171)
T 2rli_A 7 GDFHLL----DHRGRARCKADF-RGQWVLMYFG-FTHCPDICPDE-LEKLVQVVRQLEAEPGLPPV-QPVFITVDPERDD 78 (171)
T ss_dssp SCCEEE----ETTSCEEETTTT-TTSEEEEEEE-CTTCSSSHHHH-HHHHHHHHHHHHHSTTSCCE-EEEEEESCSTTCC
T ss_pred CCeEEE----eCCCCEEeHHHh-CCCEEEEEEE-cCCCCchhHHH-HHHHHHHHHHHhhccCCCce-EEEEEEECCCCCC
Confidence 999999 899999999997 8999888888 899997 9998 9999999999986 578 99999986 6
Q ss_pred HHHHHHHHHhCCCCCceEEEEcCC---chHHHHcCCcccccc----CCCCccceeEEEEEc-CCeEEEEEeecC
Q 038822 82 PFVMKAWAKTFPKNKSVKFLADGS---AKYTHALGLELDLSE----KGLGTQSRRFALLVD-DLKVKAANVESG 147 (162)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~D~~---~~~~~~~gv~~~~~~----~~~~~~~~~~~~ii~-~g~i~~~~~~~~ 147 (162)
++.+++|.++++. +|+++.|.. +.+++.||+...+.. ..+.....|.+||+| +|+|++.+.+..
T Consensus 79 ~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~ 150 (171)
T 2rli_A 79 VEAMARYVQDFHP--RLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSR 150 (171)
T ss_dssp HHHHHHHHHTTCT--TCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSC
T ss_pred HHHHHHHHHHcCC--CeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCC
Confidence 8999999999998 999998754 579999998743210 111122345689999 999999987653
No 93
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.92 E-value=2e-25 Score=156.52 Aligned_cols=132 Identities=13% Similarity=0.246 Sum_probs=113.5
Q ss_pred CCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC---
Q 038822 4 IAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN--- 80 (162)
Q Consensus 4 l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d--- 80 (162)
+++|+++|+|++. +.+|+.++++++ +||++||.|| ++|||.|..+ ++.|.+++++++ ++ .|++|+.|
T Consensus 11 ~~~g~~~p~~~l~----~~~g~~~~l~~~-~gk~~lv~F~-~~~C~~C~~~-~~~l~~l~~~~~--~v-~vv~i~~d~~~ 80 (165)
T 3ha9_A 11 EEVLEREASFSLT----TIDGEVISLNNV-GGDVVILWFM-AAWCPSCVYM-ADLLDRLTEKYR--EI-SVIAIDFWTAE 80 (165)
T ss_dssp HHHHHHHHCCCEE----BTTSCEECGGGC-CSSEEEEEEE-CTTCTTHHHH-HHHHHHHHHHCT--TE-EEEEEECCSHH
T ss_pred ccccCcCCCCEee----cCCCCEeeHHHh-CCCEEEEEEE-CCCCcchhhh-HHHHHHHHHHcC--Cc-EEEEEEecccc
Confidence 4678999999999 899999999997 9999999999 9999999997 999999999987 78 99999986
Q ss_pred ----------------CHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEE
Q 038822 81 ----------------DPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAAN 143 (162)
Q Consensus 81 ----------------~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~ 143 (162)
+++..++|.+++++ .+|+++.| ++.+++.|++. ++|+ ++|+| +|+|++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d-~~~~~~~~~v~--------~~P~---~~lid~~G~i~~-- 145 (165)
T 3ha9_A 81 ALKALGLNKPGYPPPDTPEMFRKFIANYGD-PSWIMVMD-DGSLVEKFNVR--------SIDY---IVIMDKSSNVLY-- 145 (165)
T ss_dssp HHHHHTCCSTTSCCCCCHHHHHHHHHHHSC-TTSEEEEC-CSHHHHHTTCC--------SSSE---EEEEETTCCEEE--
T ss_pred cccccccccccCCCCCCHHHHHHHHHHcCC-CCeeEEeC-hHHHHHHhCCC--------CceE---EEEEcCCCcEEE--
Confidence 78999999999986 48999999 99999999987 5554 88888 999999
Q ss_pred eecCCcceeCCHHHHHhcC
Q 038822 144 VESGGDFTVSSADDILKSL 162 (162)
Q Consensus 144 ~~~~~~~~~~~~~~il~~l 162 (162)
.+... +.++++++|+++
T Consensus 146 ~g~~~--~~~~l~~~l~~l 162 (165)
T 3ha9_A 146 AGTTP--SLGELESVIKSV 162 (165)
T ss_dssp EEESC--CHHHHHHHHHHC
T ss_pred eCCCC--CHHHHHHHHHHH
Confidence 44331 236677776654
No 94
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.92 E-value=2.9e-24 Score=157.76 Aligned_cols=132 Identities=16% Similarity=0.150 Sum_probs=99.6
Q ss_pred CCCCCCCCCeeeeeeecCCC-ceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC--
Q 038822 4 IAVGDPLPDGTLVYFDEQDQ-LQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN-- 80 (162)
Q Consensus 4 l~~G~~~P~f~l~~~~~~~~-g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d-- 80 (162)
...+.++|+|+++ +.+ |++++|++| +||++||+|| ++|||.|+ | ++.|++++++++++|+ +|++|+.|
T Consensus 29 ~~~~~~~pdF~l~----d~~~G~~v~Lsd~-~GKvvll~Fw-At~C~~c~-e-~p~L~~l~~~~~~~g~-~Vlgvs~d~f 99 (215)
T 2i3y_A 29 KDEKGTIYDYEAI----ALNKNEYVSFKQY-VGKHILFVNV-ATYCGLTA-Q-YPELNALQEELKPYGL-VVLGFPCNQF 99 (215)
T ss_dssp CCCCCCGGGCEEE----BSSSSCEEEGGGG-TTSEEEEEEE-CSSSGGGG-G-HHHHHHHHHHHGGGTE-EEEEEECCCS
T ss_pred ccccCCcCCcEee----eCCCCCEEcHHHh-CCCEEEEEEe-CCCCCChH-h-HHHHHHHHHHhccCCe-EEEEEEcccc
Confidence 3456789999999 899 999999998 9998888887 99999998 8 9999999999999999 99999953
Q ss_pred ------CHHHHHHHHH------hCCCCCceEEEEcCC--chHH-HHcCCcccccc-----CC------------CCccce
Q 038822 81 ------DPFVMKAWAK------TFPKNKSVKFLADGS--AKYT-HALGLELDLSE-----KG------------LGTQSR 128 (162)
Q Consensus 81 ------~~~~~~~~~~------~~~~~~~~~~l~D~~--~~~~-~~~gv~~~~~~-----~~------------~~~~~~ 128 (162)
+.+.+++|++ ++++ +||+++|.+ +..+ ..|+....... .+ ..+...
T Consensus 100 ~~~e~~~~~~i~~f~~~~~~~~~~~~--~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~n 177 (215)
T 2i3y_A 100 GKQEPGDNKEILPGLKYVRPGGGFVP--SFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWN 177 (215)
T ss_dssp TTCCCSCHHHHHHHHHHTSSCTTCCC--SSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCST
T ss_pred CcCCCCCHHHHHHHHHhccchhccCc--cceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccC
Confidence 5788999999 8888 999998754 3221 11221100000 00 011111
Q ss_pred eEEEEEc-CCeEEEEEeec
Q 038822 129 RFALLVD-DLKVKAANVES 146 (162)
Q Consensus 129 ~~~~ii~-~g~i~~~~~~~ 146 (162)
|.+|||| +|+|++.+.+.
T Consensus 178 pttfLID~~G~vv~~~~g~ 196 (215)
T 2i3y_A 178 FEKFLVGPDGIPVMRWSHR 196 (215)
T ss_dssp TCEEEECTTSCEEEEECTT
T ss_pred ceEEEECCCCeEEEEeCCC
Confidence 3589999 99999999864
No 95
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.91 E-value=9.7e-25 Score=153.47 Aligned_cols=121 Identities=21% Similarity=0.324 Sum_probs=105.7
Q ss_pred CCCCCCCCCCCeeeeeeecCC--CceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEc
Q 038822 2 APIAVGDPLPDGTLVYFDEQD--QLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISV 79 (162)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~~--~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~ 79 (162)
..+.+|+++|+|+++ +. +|+.++++++.+||++||+|| ++|||+|+.+ ++.+++++++ ++ .+++|+.
T Consensus 20 ~~~~~G~~~P~f~l~----~~~~~g~~~~~~~~~~gk~vll~F~-a~~C~~C~~~-~~~l~~l~~~----~v-~vv~v~~ 88 (168)
T 2b1k_A 20 ESALIGKPVPKFRLE----SLDNPGQFYQADVLTQGKPVLLNVW-ATWCPTCRAE-HQYLNQLSAQ----GI-RVVGMNY 88 (168)
T ss_dssp CCTTTTSBCCCCEEE----ESSSTTCEEEGGGGCCSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHT----TC-CEEEEEE
T ss_pred cccccCCcCCCeEee----cccCCCcEeehhHhcCCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHC----CC-EEEEEEC
Confidence 357899999999999 77 899999998558999999998 8999999998 9999888765 78 8999996
Q ss_pred -CCHHHHHHHHHhCCCCCceE-EEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeec
Q 038822 80 -NDPFVMKAWAKTFPKNKSVK-FLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVES 146 (162)
Q Consensus 80 -d~~~~~~~~~~~~~~~~~~~-~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~ 146 (162)
++++..++|.+++++ +|+ ++.|.+..+++.||+. ++|+ +|++| +|+|++.+.+.
T Consensus 89 ~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~v~--------~~P~---~~lid~~G~i~~~~~g~ 145 (168)
T 2b1k_A 89 KDDRQKAISWLKELGN--PYALSLFDGDGMLGLDLGVY--------GAPE---TFLIDGNGIIRYRHAGD 145 (168)
T ss_dssp SCCHHHHHHHHHHHCC--CCSEEEEETTCHHHHHHTCC--------SSSE---EEEECTTSBEEEEEESC
T ss_pred CCChHHHHHHHHHcCC--CCceeeECcchHHHHHcCcc--------ccCE---EEEECCCCeEEEEEeCC
Confidence 578889999999998 887 6799999999999997 4554 88888 99999998875
No 96
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.91 E-value=1.5e-24 Score=146.82 Aligned_cols=130 Identities=13% Similarity=0.102 Sum_probs=110.3
Q ss_pred CCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCC-HHHHH
Q 038822 8 DPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVND-PFVMK 86 (162)
Q Consensus 8 ~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~-~~~~~ 86 (162)
.++|+|+++ +.+|+.++++++ +||+++|.|| ++|||.|..+ ++.+++++++++ ++ .+++|+.++ ++..+
T Consensus 2 ~~~p~~~l~----~~~g~~~~l~~~-~~k~~lv~f~-~~~C~~C~~~-~~~l~~~~~~~~--~~-~~~~v~~~~~~~~~~ 71 (136)
T 1lu4_A 2 DERLQFTAT----TLSGAPFDGASL-QGKPAVLWFW-TPWCPFCNAE-APSLSQVAAANP--AV-TFVGIATRADVGAMQ 71 (136)
T ss_dssp GGGGCCEEE----BTTSCEEEGGGG-TTSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHCT--TS-EEEEEECSSCHHHHH
T ss_pred CCCCCeEee----cCCCCeecHHHh-CCCEEEEEEE-CCcChhHHHH-HHHHHHHHHHCC--Cc-EEEEEEcCCCHHHHH
Confidence 368999999 899999999997 8999999999 8999999997 999999999987 78 999999875 89999
Q ss_pred HHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 87 AWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 87 ~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+|.+++++ +|+++.|++..+++.|++. ++|+ ++++| +|+|+ .+.+..+..+.+++.+.|++
T Consensus 72 ~~~~~~~~--~~~~~~d~~~~~~~~~~i~--------~~P~---~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ 133 (136)
T 1lu4_A 72 SFVSKYNL--NFTNLNDADGVIWARYNVP--------WQPA---FVFYRADGTST-FVNNPTAAMSQDELSGRVAA 133 (136)
T ss_dssp HHHHHHTC--CSEEEECTTSHHHHHTTCC--------SSSE---EEEECTTSCEE-EECCSSSCCCHHHHHHHHHH
T ss_pred HHHHHcCC--CceEEECCchhHHHhcCCC--------CCCE---EEEECCCCcEE-EEEcCCCccCHHHHHHHHHH
Confidence 99999999 9999999999999999986 4554 88998 99999 76622122223566666654
No 97
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.91 E-value=1.7e-24 Score=146.14 Aligned_cols=130 Identities=21% Similarity=0.230 Sum_probs=110.6
Q ss_pred CCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEE------EcCCH
Q 038822 9 PLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCI------SVNDP 82 (162)
Q Consensus 9 ~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~i------s~d~~ 82 (162)
++|+|+++ +.+|+.++++++ +||++||+|| ++|||.|..+ ++.++++++++ ..++ .+++| +.++.
T Consensus 1 ~~p~f~l~----~~~g~~~~l~~~-~gk~~lv~f~-~~~C~~C~~~-~~~l~~~~~~~-~~~~-~~v~i~~~~~~~~~~~ 71 (138)
T 4evm_A 1 EVADFELM----GVDGKTYRLSDY-KGKKVYLKFW-ASWCSICLAS-LPDTDEIAKEA-GDDY-VVLTVVSPGHKGEQSE 71 (138)
T ss_dssp CCCCCEEE----BTTSCEEEGGGG-TTSEEEEEEC-CTTCHHHHHH-HHHHHHHHHTC-TTTE-EEEEEECTTSTTCCCH
T ss_pred CCCcceeE----CCCCCEEEHHHh-CCCEEEEEEE-cCcCHHHHHH-HHHHHHHHHHh-CCCc-EEEEEEcCCCCchhhH
Confidence 58999999 899999999997 9999999888 8999999998 99999999984 3467 88888 44678
Q ss_pred HHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 83 FVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+..++|.+++++ .+++++.|++..+++.|++. ++|+ ++++| +|+|++.+.+.... +++.+.|++
T Consensus 72 ~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~--------~~P~---~~lid~~G~i~~~~~g~~~~---~~l~~~l~~ 136 (138)
T 4evm_A 72 ADFKNWYKGLDY-KNLPVLVDPSGKLLETYGVR--------SYPT---QAFIDKEGKLVKTHPGFMEK---DAILQTLKE 136 (138)
T ss_dssp HHHHHHHTTCCC-TTCCEEECTTCHHHHHTTCC--------SSSE---EEEECTTCCEEEEEESCCCH---HHHHHHHHH
T ss_pred HHHHHHHhhcCC-CCeeEEECcchHHHHHcCcc--------cCCe---EEEECCCCcEEEeecCCCcH---HHHHHHHHh
Confidence 999999999985 57999999999999999987 4554 89998 99999999865443 667777665
Q ss_pred C
Q 038822 162 L 162 (162)
Q Consensus 162 l 162 (162)
|
T Consensus 137 l 137 (138)
T 4evm_A 137 L 137 (138)
T ss_dssp C
T ss_pred h
Confidence 4
No 98
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.91 E-value=3.7e-24 Score=156.36 Aligned_cols=131 Identities=14% Similarity=0.084 Sum_probs=97.2
Q ss_pred CCCCCCCCeeeeeeecCCC-ceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC---
Q 038822 5 AVGDPLPDGTLVYFDEQDQ-LQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN--- 80 (162)
Q Consensus 5 ~~G~~~P~f~l~~~~~~~~-g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d--- 80 (162)
.....+|+|+++ +.+ |++++|+++ +||++||+|| ++|||.| .| ++.|++++++++++|+ +|++||.|
T Consensus 12 ~~~~~~pdF~l~----d~~~G~~v~Ls~~-kGKvvll~F~-At~C~~c-~e-~p~L~~l~~~~~~~g~-~vlgvs~d~f~ 82 (207)
T 2r37_A 12 GISGTIYEYGAL----TIDGEEYIPFKQY-AGKYVLFVNV-ASYGGLT-GQ-YIELNALQEELAPFGL-VILGFPCNQFG 82 (207)
T ss_dssp ---CCGGGCEEE----BTTSSCEEEGGGG-TTSEEEEEEE-CSSSTTT-TH-HHHHHHHHHHHGGGTE-EEEEEECCCBT
T ss_pred cccCccCCeEee----eCCCCCEEcHHHh-CCCEEEEEEe-CCCCCCh-HH-HHHHHHHHHHhccCCE-EEEEEECcccC
Confidence 345689999999 899 999999998 9998888887 9999999 77 9999999999999999 99999953
Q ss_pred -----CHHHHHHHHH------hCCCCCceEEEEcCC--chH-HHHcCCcccccc-----------------CCCCcccee
Q 038822 81 -----DPFVMKAWAK------TFPKNKSVKFLADGS--AKY-THALGLELDLSE-----------------KGLGTQSRR 129 (162)
Q Consensus 81 -----~~~~~~~~~~------~~~~~~~~~~l~D~~--~~~-~~~~gv~~~~~~-----------------~~~~~~~~~ 129 (162)
+.+.+++|.+ ++++ +||+++|.+ +.. ...|+....... .+..+...|
T Consensus 83 ~~e~~~~~~i~~f~~~~~~~~~~~~--~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ 160 (207)
T 2r37_A 83 KQEPGENSEILPTLKYVRPGGGFVP--NFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNF 160 (207)
T ss_dssp TCCCSCHHHHHHHHHHTSSCTTCCC--SSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTT
T ss_pred cCCCCCHHHHHHHHHhcchhhccCc--cceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccc
Confidence 5788999999 8988 999998754 332 111211100000 000111124
Q ss_pred EEEEEc-CCeEEEEEeec
Q 038822 130 FALLVD-DLKVKAANVES 146 (162)
Q Consensus 130 ~~~ii~-~g~i~~~~~~~ 146 (162)
.+|||| +|+|++.+.+.
T Consensus 161 ttflID~~G~i~~~~~g~ 178 (207)
T 2r37_A 161 EKFLVGPDGIPIMRWHHR 178 (207)
T ss_dssp CEEEECTTSCEEEEECTT
T ss_pred eEEEECCCCcEEEEECCC
Confidence 589999 99999999865
No 99
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.91 E-value=5.8e-24 Score=143.61 Aligned_cols=129 Identities=16% Similarity=0.130 Sum_probs=110.2
Q ss_pred CCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC-CHHH
Q 038822 6 VGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN-DPFV 84 (162)
Q Consensus 6 ~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d-~~~~ 84 (162)
+|.++|+|+++ +.+|+.++++++ +||+++|.|| ++|||.|..+ ++.+.+++++++ ++ .+++|+.+ +.+.
T Consensus 1 ~~~~~p~~~~~----~~~g~~~~l~~~-~~k~~ll~f~-~~~C~~C~~~-~~~l~~~~~~~~--~~-~~~~v~~~~~~~~ 70 (136)
T 1zzo_A 1 TVPAQLQFSAK----TLDGHDFHGESL-LGKPAVLWFW-APWCPTCQGE-APVVGQVAASHP--EV-TFVGVAGLDQVPA 70 (136)
T ss_dssp CCCGGGCCEEE----BTTSCEEEGGGG-TTSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHCT--TS-EEEEEECSSCHHH
T ss_pred CCCCCCCcccc----cCCCCEeeHHHh-CCCeEEEEEE-cCCChhHHHH-HHHHHHHHHHcC--Ce-EEEEEeCCCCHHH
Confidence 57889999999 899999999997 8999999999 8999999998 999999999987 78 99999986 4889
Q ss_pred HHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHHHh
Q 038822 85 MKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
.++|.+++++ .+|+++.|.+..+++.||+. ++|+ ++++| +|+|+ .+.+... .+++.+.|+
T Consensus 71 ~~~~~~~~~~-~~~~~~~d~~~~~~~~~~i~--------~~P~---~~~id~~g~i~-~~~g~~~---~~~l~~~l~ 131 (136)
T 1zzo_A 71 MQEFVNKYPV-KTFTQLADTDGSVWANFGVT--------QQPA---YAFVDPHGNVD-VVRGRMS---QDELTRRVT 131 (136)
T ss_dssp HHHHHHHTTC-TTSEEEECTTCHHHHHTTCC--------SSSE---EEEECTTCCEE-EEESCCC---HHHHHHHHH
T ss_pred HHHHHHHcCC-CceEEEEcCCcHHHHHcCCC--------CCce---EEEECCCCCEE-EEecCCC---HHHHHHHHH
Confidence 9999999986 47999999999999999987 5554 88998 99999 6665433 255555554
No 100
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.90 E-value=4.4e-24 Score=147.92 Aligned_cols=120 Identities=13% Similarity=0.194 Sum_probs=102.2
Q ss_pred CCCCCCCCCCeeeeeeecCCCc--------eeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeE
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQL--------QQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEI 74 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g--------~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v 74 (162)
.+.+|+++|+|+++ +.+| +.++++++ +||++||.|| ++|||.|..+ ++.+++++++ .++ .+
T Consensus 7 ~~~~g~~~p~f~l~----~~~g~~~~~~~~~~~~l~~~-~gk~~ll~f~-~~~C~~C~~~-~~~l~~l~~~---~~v-~~ 75 (156)
T 1kng_A 7 SALIGRPAPQTALP----PLEGLQADNVQVPGLDPAAF-KGKVSLVNVW-ASWCVPCHDE-APLLTELGKD---KRF-QL 75 (156)
T ss_dssp -----CBCCCCCBC----CCTTCEETTEECCCBCGGGG-TTSCEEEEEE-CTTCHHHHHH-HHHHHHHTTC---TTS-EE
T ss_pred hHHhCCCCCCceee----eccCcccccccCceechHHh-CCCEEEEEEE-cccCHhHHHH-HHHHHHHHhc---CCe-EE
Confidence 57899999999999 8888 99999997 8999999988 7999999998 9999988866 458 99
Q ss_pred EEEEc-CCHHHHHHHHHhCCCCCceE-EEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeec
Q 038822 75 LCISV-NDPFVMKAWAKTFPKNKSVK-FLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVES 146 (162)
Q Consensus 75 ~~is~-d~~~~~~~~~~~~~~~~~~~-~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~ 146 (162)
++|+. ++.+..++|.+++++ +|+ ++.|.+..+++.|++. ++| +++++| +|+|++.+.+.
T Consensus 76 v~v~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~v~--------~~P---~~~~id~~G~i~~~~~g~ 137 (156)
T 1kng_A 76 VGINYKDAADNARRFLGRYGN--PFGRVGVDANGRASIEWGVY--------GVP---ETFVVGREGTIVYKLVGP 137 (156)
T ss_dssp EEEEESCCHHHHHHHHHHHCC--CCSEEEEETTSHHHHHTTCC--------SSC---EEEEECTTSBEEEEEESC
T ss_pred EEEECCCCHHHHHHHHHHcCC--CCceeeeCchhHHHHhcCcC--------ccC---eEEEEcCCCCEEEEEeCC
Confidence 99996 578889999999998 898 8899999999999987 455 488898 99999988765
No 101
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.88 E-value=1.7e-23 Score=143.62 Aligned_cols=121 Identities=17% Similarity=0.261 Sum_probs=103.4
Q ss_pred CCCCCCCC-eeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHh-CCCCeEEEEEcC-C
Q 038822 5 AVGDPLPD-GTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQS-KGVDEILCISVN-D 81 (162)
Q Consensus 5 ~~G~~~P~-f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~-~~~~~v~~is~d-~ 81 (162)
.+|+++|+ |+++ +.+|++++++++ +||++||+|| ++|||.|+.+ ++.|+++++++++ .++ .|++|+.| +
T Consensus 2 ~~~~~~P~~f~l~----~~~g~~~~l~~~-~gk~vll~F~-a~wC~~C~~~-~~~l~~l~~~~~~~~~~-~vv~v~~d~~ 73 (144)
T 1i5g_A 2 GLKKFFPYSTNVL----KGAAADIALPSL-AGKTVFFYFS-ASWCPPSRAF-TPQLIDFYKAHAEKKNF-EVMLISWDES 73 (144)
T ss_dssp TTTTSCSSCSEEE----ETTEEEEEGGGG-TTSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTTTTTE-EEEEEECCSS
T ss_pred chhhhCCCceEEE----cCCCCEecHHHc-CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHhccCCCE-EEEEEeCCCC
Confidence 36899999 9999 899999999997 8999888888 7999999998 9999999999985 678 99999998 6
Q ss_pred HHHHHHHHHhCCCCCceEEEE-cCCchHHHHcCCccccccCCCCccceeEEEEEc--CCeEEEEEee
Q 038822 82 PFVMKAWAKTFPKNKSVKFLA-DGSAKYTHALGLELDLSEKGLGTQSRRFALLVD--DLKVKAANVE 145 (162)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~-D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~--~g~i~~~~~~ 145 (162)
.+..++|.+++++ .+++++. |.+..+++.|++. ++|+ ++|+| +|+|++.+..
T Consensus 74 ~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~v~--------~~P~---~~lid~~~G~i~~~~~~ 128 (144)
T 1i5g_A 74 AEDFKDYYAKMPW-LALPFEDRKGMEFLTTGFDVK--------SIPT---LVGVEADSGNIITTQAR 128 (144)
T ss_dssp HHHHHHHHTTCSS-EECCTTCHHHHHHHHHHTTCC--------SSSE---EEEEETTTCCEEESCHH
T ss_pred HHHHHHHHHhCCc-cccccCchHHHHHHHHHcCCC--------CCCE---EEEEECCCCcEEeccch
Confidence 8889999999874 3566655 6678999999987 5554 77776 9999998764
No 102
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.88 E-value=6.8e-24 Score=148.23 Aligned_cols=129 Identities=12% Similarity=0.133 Sum_probs=108.3
Q ss_pred CCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC------
Q 038822 7 GDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN------ 80 (162)
Q Consensus 7 G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d------ 80 (162)
|+++| +++ +.+|++++++++ +||++||+|| ++|||.|+.+ ++.|++++++++..++ .|++|+.+
T Consensus 17 ~~~~p--~l~----~~~g~~~~~~~~-~gk~vlv~F~-a~~C~~C~~~-~~~l~~l~~~~~~~~~-~vv~v~~~~~~~~~ 86 (164)
T 2h30_A 17 PHTMS--TMK----TADNRPASVYLK-KDKPTLIKFW-ASWCPLCLSE-LGQAEKWAQDAKFSSA-NLITVASPGFLHEK 86 (164)
T ss_dssp HHHHT--TCE----ETTSSBGGGGCC-TTSCEEEEEC-CTTCHHHHHH-HHHHHHHHTCGGGTTS-EEEEEECTTSTTCC
T ss_pred CCcCC--ccC----CCCCCEeeHHHh-CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHcccCCc-EEEEEEcCCCcccc
Confidence 34445 677 789999999997 8999999999 9999999998 9999999999988899 99999963
Q ss_pred CHHHHHHHHHhCCCCCc-eEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHH
Q 038822 81 DPFVMKAWAKTFPKNKS-VKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDI 158 (162)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~i 158 (162)
+.+..++|.+++++ + +++..|.+..+++.|++. ++|+ ++|+| +|+|++.+.+... .+++++.
T Consensus 87 ~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~v~--------~~P~---~~lid~~G~i~~~~~g~~~---~~~l~~~ 150 (164)
T 2h30_A 87 KDGEFQKWYAGLNY--PKLPVVTDNGGTIAQNLNIS--------VYPS---WALIGKDGDVQRIVKGSIN---EAQALAL 150 (164)
T ss_dssp CTTHHHHHHTTSCC--TTSCEEECTTCHHHHHTTCC--------SSSE---EEEECTTSCEEEEEESCCC---HHHHHHH
T ss_pred CHHHHHHHHHhCCC--CcceEEEcCchHHHHHcCCC--------ccce---EEEECCCCcEEEEEcCCCC---HHHHHHH
Confidence 56788889988887 6 899999999999999987 5654 88998 9999999876533 2566666
Q ss_pred Hhc
Q 038822 159 LKS 161 (162)
Q Consensus 159 l~~ 161 (162)
|+.
T Consensus 151 i~~ 153 (164)
T 2h30_A 151 IRN 153 (164)
T ss_dssp HHC
T ss_pred HHH
Confidence 654
No 103
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.88 E-value=4.4e-23 Score=141.95 Aligned_cols=121 Identities=21% Similarity=0.306 Sum_probs=103.4
Q ss_pred CCCCCCCC-eeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHh-CCCCeEEEEEcC-C
Q 038822 5 AVGDPLPD-GTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQS-KGVDEILCISVN-D 81 (162)
Q Consensus 5 ~~G~~~P~-f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~-~~~~~v~~is~d-~ 81 (162)
.+|+.+|+ |++. +.+| .++++++ +||++||+|| ++|||.|+.+ ++.|+++++++++ .++ +|++|+.| +
T Consensus 3 ~~~~~~P~~f~l~----~~~g-~~~l~~~-~gk~vll~F~-a~wC~~C~~~-~p~l~~l~~~~~~~~~~-~vv~v~~d~~ 73 (146)
T 1o8x_A 3 GLDKYLPGIEKLR----RGDG-EVEVKSL-AGKLVFFYFS-ASWCPPARGF-TPQLIEFYDKFHESKNF-EVVFCTWDEE 73 (146)
T ss_dssp CGGGTSTTCCEEE----ETTE-EEEGGGG-TTCEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTTTTTE-EEEEEECCCS
T ss_pred chHhhCCCceEEE----cCCC-CCcHHHh-CCCEEEEEEE-ccCCHHHHHH-HHHHHHHHHHhhhcCCe-EEEEEeCCCC
Confidence 67999999 9999 8899 9999997 8999988888 7999999998 9999999999984 688 99999997 5
Q ss_pred HHHHHHHHHhCCCCCceEEEE-cCCchHHHHcCCccccccCCCCccceeEEEEEc--CCeEEEEEeec
Q 038822 82 PFVMKAWAKTFPKNKSVKFLA-DGSAKYTHALGLELDLSEKGLGTQSRRFALLVD--DLKVKAANVES 146 (162)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~-D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~--~g~i~~~~~~~ 146 (162)
.+..++|.+++++ .++++.. |.+..+++.|++. ++|+ ++|+| +|+|++.+...
T Consensus 74 ~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~v~--------~~Pt---~~lid~~~G~i~~~~~~~ 129 (146)
T 1o8x_A 74 EDGFAGYFAKMPW-LAVPFAQSEAVQKLSKHFNVE--------SIPT---LIGVDADSGDVVTTRARA 129 (146)
T ss_dssp HHHHHHHHTTCSS-EECCGGGHHHHHHHHHHTTCC--------SSSE---EEEEETTTCCEEESCHHH
T ss_pred HHHHHHHHHHCCc-eeeccchhhHHHHHHHHhCCC--------CCCE---EEEEECCCCeEEEecchh
Confidence 7889999999874 3566655 6678999999987 5554 77776 99999987653
No 104
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.86 E-value=1.2e-22 Score=139.06 Aligned_cols=120 Identities=19% Similarity=0.317 Sum_probs=101.3
Q ss_pred CCCCCCCCe-eeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHH-hCCCCeEEEEEcC-C
Q 038822 5 AVGDPLPDG-TLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQ-SKGVDEILCISVN-D 81 (162)
Q Consensus 5 ~~G~~~P~f-~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~-~~~~~~v~~is~d-~ 81 (162)
.+|+++|+| ++. +.+| .++++++ +||++||+|| ++|||.|+.+ ++.|++++++++ +.++ .|++|+.| +
T Consensus 3 ~~g~~~p~~~~l~----~~~g-~~~l~~~-~gk~vll~F~-a~wC~~C~~~-~~~l~~l~~~~~~~~~~-~vv~i~~d~~ 73 (144)
T 1o73_A 3 GLAKYLPGATNLL----SKSG-EVSLGSL-VGKTVFLYFS-ASWCPPCRGF-TPVLAEFYEKHHVAKNF-EVVLISWDEN 73 (144)
T ss_dssp GGGGTSCTTCCBB----CTTS-CBCSGGG-TTCEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTTTTTE-EEEEEECCSS
T ss_pred chhhhCccceEee----cCCC-cCcHHHh-CCCEEEEEEE-CcCCHHHHHH-HHHHHHHHHHhccCCCE-EEEEEeCCCC
Confidence 789999997 999 8999 9999997 8999988888 8999999998 999999999998 4678 99999997 4
Q ss_pred HHHHHHHHHhCCCCCceEEEE-cCCchHHHHcCCccccccCCCCccceeEEEEEc--CCeEEEEEee
Q 038822 82 PFVMKAWAKTFPKNKSVKFLA-DGSAKYTHALGLELDLSEKGLGTQSRRFALLVD--DLKVKAANVE 145 (162)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~-D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~--~g~i~~~~~~ 145 (162)
.+..++|.+++++ ..+++.. |.+..+++.|++. ++|+ ++|+| +|+|++.+..
T Consensus 74 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~--------~~Pt---~~lid~~~G~i~~~~~~ 128 (144)
T 1o73_A 74 ESDFHDYYGKMPW-LALPFDQRSTVSELGKTFGVE--------SIPT---LITINADTGAIIGTQAR 128 (144)
T ss_dssp HHHHHHHHTTCSS-EECCTTCHHHHHHHHHHHTCC--------SSSE---EEEEETTTCCEEESCHH
T ss_pred HHHHHHHHHhCCc-eEeeccchhHHHHHHHHcCCC--------CCCE---EEEEECCCCeEEecchh
Confidence 6788899998874 2455444 5668899999987 5554 77777 9999988754
No 105
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.86 E-value=1.6e-23 Score=147.53 Aligned_cols=122 Identities=19% Similarity=0.269 Sum_probs=102.5
Q ss_pred CCCCCCCCCCe-eeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHh-CCCCeEEEEEcC
Q 038822 3 PIAVGDPLPDG-TLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQS-KGVDEILCISVN 80 (162)
Q Consensus 3 ~l~~G~~~P~f-~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~-~~~~~v~~is~d 80 (162)
+..+|+++|+| +++ +.+| +++|+++ +||++||+|| ++|||.|+.+ +|.|+++++++++ .++ .|++|+.|
T Consensus 21 ~~~vG~~~P~f~~l~----~~~g-~v~l~~~-~gk~vll~F~-a~wC~~C~~~-~p~l~~l~~~~~~~~~v-~vv~v~~d 91 (165)
T 3s9f_A 21 MSGVAKHLGEALKLR----KQAD-TADMDSL-SGKTVFFYFS-ASWCPPCRGF-TPQLVEFYEKHHDSKNF-EIILASWD 91 (165)
T ss_dssp -CHHHHHHHHTSCEE----ETTE-EECSGGG-TTSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTTTTTE-EEEEEECC
T ss_pred hhhhcccCCcceeee----cCCC-cccHHHc-CCCEEEEEEE-CCcChhHHHH-HHHHHHHHHHhccCCCe-EEEEEecC
Confidence 45789999999 999 8899 9999997 8999988888 9999999998 9999999999986 688 99999986
Q ss_pred C-HHHHHHHHHhCCCCCceEEEEcCC-chHHHHcCCccccccCCCCccceeEEEEEc-C-CeEEEEEee
Q 038822 81 D-PFVMKAWAKTFPKNKSVKFLADGS-AKYTHALGLELDLSEKGLGTQSRRFALLVD-D-LKVKAANVE 145 (162)
Q Consensus 81 ~-~~~~~~~~~~~~~~~~~~~l~D~~-~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~-g~i~~~~~~ 145 (162)
. .+..++|++++++ ..+++..+.. ..+++.|++. ++|+ ++|+| + |+|++....
T Consensus 92 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~v~--------~~Pt---~~lid~~~G~iv~~~~~ 148 (165)
T 3s9f_A 92 EEEDDFNAYYAKMPW-LSIPFANRNIVEALTKKYSVE--------SIPT---LIGLNADTGDTVTTRAR 148 (165)
T ss_dssp CSHHHHHHHHTTCSS-EECCTTCHHHHHHHHHHTTCC--------SSSE---EEEEETTTCCEEESCHH
T ss_pred CCHHHHHHHHHhCCC-cccccCchhHHHHHHHHcCCC--------CCCE---EEEEeCCCCEEEecccH
Confidence 4 5788999998874 3455555444 7899999997 5664 88888 8 999998764
No 106
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.75 E-value=5.8e-23 Score=140.29 Aligned_cols=117 Identities=17% Similarity=0.209 Sum_probs=99.0
Q ss_pred CCCCCeeeeeeecCCCceeEehhh-hcCCC-eEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHh--CCCCeEEEEEcC-CH
Q 038822 8 DPLPDGTLVYFDEQDQLQQVSVHS-LAAGK-KVILFGVPGDFTPTCSLKHVPGFIEKADELQS--KGVDEILCISVN-DP 82 (162)
Q Consensus 8 ~~~P~f~l~~~~~~~~g~~~~l~~-~~~gk-~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~--~~~~~v~~is~d-~~ 82 (162)
+.+|+|+++ +.+|+++++++ + +|| +++|+|| ++|||.|+.+ ++.++++++++++ .++ .+++|+.| ++
T Consensus 2 ~~~p~~~l~----~~~g~~~~l~~~~-~gk~~vll~F~-a~wC~~C~~~-~~~l~~~~~~~~~~~~~~-~v~~v~~d~~~ 73 (143)
T 2lus_A 2 EFIQGIKLV----KKNRCEVNANEAL-KDKDIIGFYFS-AHWCPPCRGF-TPILADMYSELVDDSAPF-EIIFVSSDRSE 73 (143)
Confidence 468999999 89999999999 6 898 8888888 7999999998 9999999999953 478 89999987 56
Q ss_pred HHHHHHHHhCCCCCce---EEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEee
Q 038822 83 FVMKAWAKTFPKNKSV---KFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVE 145 (162)
Q Consensus 83 ~~~~~~~~~~~~~~~~---~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~ 145 (162)
+..++|.+++++ +| ++..|.+..+++.|++. ++|+ ++++| +|+|++.+..
T Consensus 74 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~--------~~P~---~~lid~~G~i~~~~~~ 127 (143)
T 2lus_A 74 DDMFQYMMESHG--DWLAIPYRSGPASNVTAKYGIT--------GIPA---LVIVKKDGTLISMNGR 127 (143)
Confidence 788899999987 54 45667778999999986 4554 89999 9999998654
No 107
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.53 E-value=3.5e-15 Score=99.79 Aligned_cols=109 Identities=9% Similarity=0.057 Sum_probs=80.8
Q ss_pred CCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHH
Q 038822 8 DPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKA 87 (162)
Q Consensus 8 ~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~ 87 (162)
+.+++++.. +.+|........ ++++++|.|| ++|||.|... .+.+.+++++++ .++ .++.|+.+
T Consensus 4 ~~~~~l~~~----~~~~~~~~~~~~-~~k~~lv~f~-a~wC~~C~~~-~~~l~~~~~~~~-~~v-~~~~v~~~------- 67 (126)
T 2l57_A 4 EGIKQINFQ----SINVVENLEEAK-EGIPTIIMFK-TDTCPYCVEM-QKELSYVSKERE-GKF-NIYYARLE------- 67 (126)
T ss_dssp CCSSCTTTT----CCSEESSTTTCC-SSSCEEEEEE-CSSCHHHHHH-HHHHHHHHHHSS-SSC-EEEEEETT-------
T ss_pred cccCCCCcc----ccchhHHHHHHh-CCCcEEEEEE-CCCCccHHHH-HHHHHHHHHHhc-CCe-EEEEEeCC-------
Confidence 456666666 556655545543 7888888888 8999999998 999999999887 568 89999854
Q ss_pred HHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHHHh
Q 038822 88 WAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 88 ~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
.|.+..+++.|++. ++|+ +++++ +|++++.+.+.... +++.++|+
T Consensus 68 --------------~d~~~~~~~~~~v~--------~~Pt---~~~~~~~G~~~~~~~G~~~~---~~l~~~l~ 113 (126)
T 2l57_A 68 --------------EEKNIDLAYKYDAN--------IVPT---TVFLDKEGNKFYVHQGLMRK---NNIETILN 113 (126)
T ss_dssp --------------SSHHHHHHHHTTCC--------SSSE---EEEECTTCCEEEEEESCCCH---HHHHHHHH
T ss_pred --------------CCchHHHHHHcCCc--------ceeE---EEEECCCCCEEEEecCCCCH---HHHHHHHH
Confidence 23345788999987 5664 88999 99999988764332 55665554
No 108
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.52 E-value=4.4e-16 Score=105.63 Aligned_cols=115 Identities=15% Similarity=0.060 Sum_probs=82.1
Q ss_pred CCCCCCCCCee-eeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHH---HHhHHHHHhCCCCeEEEEEc
Q 038822 4 IAVGDPLPDGT-LVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGF---IEKADELQSKGVDEILCISV 79 (162)
Q Consensus 4 l~~G~~~P~f~-l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l---~~~~~~~~~~~~~~v~~is~ 79 (162)
+..|.++|+|+ +. +.++....|++. +|+++||.|| ++|||.|+.. .+.+ .++.++++ ++ .++.|+.
T Consensus 4 ~~~~~~~~~f~~~~----~~~~~~~~l~~~-~~k~vlv~F~-a~wC~~C~~~-~~~~~~~~~l~~~~~--~~-~~~~vd~ 73 (134)
T 2fwh_A 4 TAQTQTHLNFTQIK----TVDELNQALVEA-KGKPVMLDLY-ADWCVACKEF-EKYTFSDPQVQKALA--DT-VLLQANV 73 (134)
T ss_dssp ------CCCCEECC----SHHHHHHHHHHH-TTSCEEEEEE-CTTCHHHHHH-HHHTTTSHHHHHHTT--TS-EEEEEEC
T ss_pred ccccccCCCcEEec----CHHHHHHHHHHh-cCCcEEEEEE-CCCCHHHHHH-HHHhcCCHHHHHHhc--Cc-EEEEEeC
Confidence 45788899998 55 566677788887 7999999998 8999999997 8887 77877775 57 8999988
Q ss_pred CCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEE--EEEeecCCcceeCCHH
Q 038822 80 NDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVK--AANVESGGDFTVSSAD 156 (162)
Q Consensus 80 d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~--~~~~~~~~~~~~~~~~ 156 (162)
+.. .|.+..+++.|++. ++|+ ++++| +|+++ +.+.|... .++++
T Consensus 74 ~~~-------------------~~~~~~l~~~~~v~--------~~Pt---~~~~d~~G~~v~~~~~~G~~~---~~~l~ 120 (134)
T 2fwh_A 74 TAN-------------------DAQDVALLKHLNVL--------GLPT---ILFFDGQGQEHPQARVTGFMD---AETFS 120 (134)
T ss_dssp TTC-------------------CHHHHHHHHHTTCC--------SSSE---EEEECTTSCBCGGGCBCSCCC---HHHHH
T ss_pred CCC-------------------cchHHHHHHHcCCC--------CCCE---EEEECCCCCEeeeeeeeeccC---HHHHH
Confidence 642 13456788999987 5664 88997 99998 56654433 35666
Q ss_pred HHHhc
Q 038822 157 DILKS 161 (162)
Q Consensus 157 ~il~~ 161 (162)
+.|+.
T Consensus 121 ~~l~~ 125 (134)
T 2fwh_A 121 AHLRD 125 (134)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66654
No 109
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.47 E-value=3.5e-15 Score=103.62 Aligned_cols=108 Identities=9% Similarity=0.005 Sum_probs=79.4
Q ss_pred CCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHH---HHhHHHHHhCCCCeEEEEEcCC
Q 038822 5 AVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGF---IEKADELQSKGVDEILCISVND 81 (162)
Q Consensus 5 ~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l---~~~~~~~~~~~~~~v~~is~d~ 81 (162)
..+...+++ . + .++.+++++. +||+++|.||.++|||+|+.+ .|.+ .++.+.+. .++ .++.|+.+.
T Consensus 25 ~~~~~~~~~--~----~-~~~~~~~a~~-~gk~vlv~F~ga~wC~~C~~~-~p~l~~~~~~~~~~~-~~~-~~v~vd~~~ 93 (154)
T 2ju5_A 25 PIAAANLQW--E----S-YAEALEHSKQ-DHKPIGLFFTGSDWCMWCIKM-QDQILQSSEFKHFAG-VHL-HMVEVDFPQ 93 (154)
T ss_dssp SSCCCCCCE--E----C-HHHHHHHHHH-HCCCEEEEEECTTTCHHHHHH-HHHTTTSHHHHHHHH-HHC-EEEEEECCS
T ss_pred hcccCCCCC--C----C-HHHHHHHHHh-CCCeEEEEEeCCCCCHhHHHH-HHHHhcCHHHHHHhc-CcE-EEEEecCcc
Confidence 445555555 4 2 4678888886 899999999878999999998 9999 66655443 457 788888764
Q ss_pred HHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecC
Q 038822 82 PFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESG 147 (162)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~ 147 (162)
.. ++ +++ +.|.+..+++.|++. ++|+ ++++| +|++++.. +..
T Consensus 94 ~~---------~~--~~~-~~~~~~~l~~~~~v~--------~~Pt---~~~~d~~G~~~~~~-G~~ 136 (154)
T 2ju5_A 94 KN---------HQ--PEE-QRQKNQELKAQYKVT--------GFPE---LVFIDAEGKQLARM-GFE 136 (154)
T ss_dssp SC---------CC--CHH-HHHHHHHHHHHTTCC--------SSSE---EEEECTTCCEEEEE-CCC
T ss_pred cc---------CC--Chh-hHhhHHHHHHHcCCC--------CCCE---EEEEcCCCCEEEEe-cCC
Confidence 32 23 333 356678899999997 5665 89998 99999988 654
No 110
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.44 E-value=9.4e-14 Score=93.18 Aligned_cols=108 Identities=6% Similarity=0.130 Sum_probs=76.4
Q ss_pred CCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHH
Q 038822 6 VGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVM 85 (162)
Q Consensus 6 ~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~ 85 (162)
...++|+++.. +++.++.... ++++++|.|| ++||+.|+.. .|.+.++++++++ ++ .++.|+.+
T Consensus 20 ~~~~~~~~~~~------~~~~~~~~~~-~~k~vlv~F~-a~wC~~C~~~-~p~l~~~~~~~~~-~v-~~~~vd~d----- 83 (128)
T 3ul3_B 20 MFKKVPRLQQN------GSNIINGVNM-KNTVIVLYFF-AKWCQACTMQ-STEMDKLQKYYGK-RI-YLLKVDLD----- 83 (128)
T ss_dssp ------CCCCC------CCSSSSBTTS-CCSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHGG-GE-EEEEEEGG-----
T ss_pred HhccCCccccC------CccHHHHHHc-cCCEEEEEEE-CCCCHHHHHH-hHHHHHHHHHhcC-Ce-EEEEEECC-----
Confidence 34556666533 5566777765 7898888888 8999999998 9999999999974 46 78888754
Q ss_pred HHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 86 KAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 86 ~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
.+..++++|++. ++|+ ++++++|+++..+.+... .+++.+.|+.
T Consensus 84 ------------------~~~~l~~~~~v~--------~~Pt---~~~~~~G~~~~~~~G~~~---~~~l~~~l~~ 127 (128)
T 3ul3_B 84 ------------------KNESLARKFSVK--------SLPT---IILLKNKTMLARKDHFVS---SNDLIALIKK 127 (128)
T ss_dssp ------------------GCHHHHHHTTCC--------SSSE---EEEEETTEEEEEESSCCC---HHHHHHHHTT
T ss_pred ------------------CCHHHHHHcCCC--------CcCE---EEEEECCEEEEEecCCCC---HHHHHHHHHh
Confidence 234788999987 5664 777789999988875433 3566666553
No 111
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.38 E-value=8.4e-13 Score=89.64 Aligned_cols=98 Identities=13% Similarity=0.186 Sum_probs=73.8
Q ss_pred CCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEE
Q 038822 21 QDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKF 100 (162)
Q Consensus 21 ~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~ 100 (162)
+.++...+|+++ ++++++|.|| ++|||.|+.. .|.+.++++++.+ .+ .++.|..+.
T Consensus 38 ~~~~~~~~l~~~-~~k~vlv~f~-a~wC~~C~~~-~~~~~~~~~~~~~-~~-~~~~v~~~~------------------- 93 (141)
T 3hxs_A 38 DYENHSKEWKYL-GDKPAIVDFY-ADWCGPCKMV-APILEELSKEYAG-KI-YIYKVNVDK------------------- 93 (141)
T ss_dssp CCSSCCCCCCCC-CSSCEEEEEE-CTTCTTHHHH-HHHHHHHHHHTTT-TC-EEEEEETTT-------------------
T ss_pred ccccchhHHHHh-CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHhcC-ce-EEEEEECCC-------------------
Confidence 456777788875 8899999998 8999999997 9999999999875 47 787777643
Q ss_pred EEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 101 LADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 101 l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+..+++.|++. ++|+ +++++ +|+++ .+.+... .+++.+.|+.
T Consensus 94 ----~~~~~~~~~v~--------~~Pt---~~~~~~~g~~~-~~~G~~~---~~~l~~~l~~ 136 (141)
T 3hxs_A 94 ----EPELARDFGIQ--------SIPT---IWFVPMKGEPQ-VNMGALS---KEQLKGYIDK 136 (141)
T ss_dssp ----CHHHHHHTTCC--------SSSE---EEEECSSSCCE-EEESCCC---HHHHHHHHHH
T ss_pred ----CHHHHHHcCCC--------CcCE---EEEEeCCCCEE-EEeCCCC---HHHHHHHHHH
Confidence 35688999987 5664 88887 99987 4444323 3556666554
No 112
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.35 E-value=4.3e-12 Score=83.01 Aligned_cols=87 Identities=14% Similarity=0.181 Sum_probs=67.9
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|... .+.+.++++++++ ++ .++.|+.+. +..+++.|+
T Consensus 16 ~~~~~lv~f~-a~wC~~C~~~-~~~l~~~~~~~~~-~v-~~~~vd~~~-----------------------~~~l~~~~~ 68 (112)
T 2voc_A 16 SEGVVLADFW-APWCGPSKMI-APVLEELDQEMGD-KL-KIVKIDVDE-----------------------NQETAGKYG 68 (112)
T ss_dssp SSSEEEEEEE-CTTBGGGGGH-HHHHHHHHHHHTT-TC-EEEEEETTT-----------------------CCSHHHHTT
T ss_pred CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHhCC-Cc-EEEEEECCC-----------------------CHHHHHHcC
Confidence 6788888888 8999999998 9999999999875 57 888888753 346889999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+. ++|+ ++++.+|++++.+.|.... +++.++++.
T Consensus 69 v~--------~~Pt---~~~~~~G~~~~~~~G~~~~---~~l~~~l~~ 102 (112)
T 2voc_A 69 VM--------SIPT---LLVLKDGEVVETSVGFKPK---EALQELVNK 102 (112)
T ss_dssp CC--------SBSE---EEEEETTEEEEEEESCCCH---HHHHHHHHT
T ss_pred CC--------cccE---EEEEeCCEEEEEEeCCCCH---HHHHHHHHH
Confidence 87 5664 7777899999988765443 566666654
No 113
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.35 E-value=5.3e-13 Score=89.84 Aligned_cols=96 Identities=16% Similarity=0.213 Sum_probs=71.1
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHH--HhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHH
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFI--EKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHA 111 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~--~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 111 (162)
++++++|.|| ++|||.|+.. .|.+. ++.+++++ ++ .++.|+.++ .|.+..+++.
T Consensus 28 ~~k~vlv~f~-a~wC~~C~~~-~~~l~~~~~~~~~~~-~~-~~~~vd~~~--------------------~~~~~~l~~~ 83 (133)
T 3fk8_A 28 THKPTLLVFG-ANWCTDCRAL-DKSLRNQKNTALIAK-HF-EVVKIDVGN--------------------FDRNLELSQA 83 (133)
T ss_dssp HTCCEEEEEE-CTTCHHHHHH-HHHHTSHHHHHHHHH-HC-EEEEEECTT--------------------TTSSHHHHHH
T ss_pred cCCcEEEEEc-CCCCHHHHHH-HHHhCCHHHHHHhcC-CE-EEEEEeCCc--------------------ccchHHHHHH
Confidence 5888888888 9999999997 99999 89988865 47 899998864 2456778999
Q ss_pred cCCccccccCCCCccceeEEEEEc-CCeEEEEEeec-CC---cceeCCHHHHHhc
Q 038822 112 LGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVES-GG---DFTVSSADDILKS 161 (162)
Q Consensus 112 ~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~-~~---~~~~~~~~~il~~ 161 (162)
|++... .++|+ ++++| +|++++...+. .. ....++++++|++
T Consensus 84 ~~v~~~-----~~~Pt---~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~ 130 (133)
T 3fk8_A 84 YGDPIQ-----DGIPA---VVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAK 130 (133)
T ss_dssp TTCGGG-----GCSSE---EEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHH
T ss_pred hCCccC-----Cccce---EEEECCCCCEEEEecCCcccccccCCHHHHHHHHHH
Confidence 998210 05554 88887 99999998872 11 1234566666654
No 114
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.31 E-value=1.8e-12 Score=88.86 Aligned_cols=109 Identities=14% Similarity=0.164 Sum_probs=78.4
Q ss_pred CCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHH
Q 038822 6 VGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVM 85 (162)
Q Consensus 6 ~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~ 85 (162)
.|.++|+..+. +.+++.+.-.- .++++++|.|| ++||+.|+.. .+.+.++++++.+ ++ .++.|+.+
T Consensus 31 ~~~~~~~~~v~----~l~~~~~~~~~-~~~k~vlv~F~-a~wC~~C~~~-~p~l~~~~~~~~~-~~-~~~~vd~~----- 96 (148)
T 3p2a_A 31 CGHSLFDGEVI----NATAETLDKLL-QDDLPMVIDFW-APWCGPCRSF-APIFAETAAERAG-KV-RFVKVNTE----- 96 (148)
T ss_dssp TCCBTTCCCCE----ECCTTTHHHHT-TCSSCEEEEEE-CSSCHHHHHH-HHHHHHHHHHTTT-TC-EEEEEETT-----
T ss_pred cCCccccCCce----ecCHHHHHHHH-hcCCcEEEEEE-CCCCHHHHHH-HHHHHHHHHHcCC-ce-EEEEEECc-----
Confidence 45566777776 45555554333 26788888888 8999999997 9999999999864 37 78888775
Q ss_pred HHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 86 KAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 86 ~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
.+..+++.|++. ++|+ ++++++|+++..+.+... .+++.+.|+
T Consensus 97 ------------------~~~~l~~~~~v~--------~~Pt---~~~~~~G~~~~~~~G~~~---~~~l~~~l~ 139 (148)
T 3p2a_A 97 ------------------AEPALSTRFRIR--------SIPT---IMLYRNGKMIDMLNGAVP---KAPFDNWLD 139 (148)
T ss_dssp ------------------TCHHHHHHTTCC--------SSSE---EEEEETTEEEEEESSCCC---HHHHHHHHH
T ss_pred ------------------CCHHHHHHCCCC--------ccCE---EEEEECCeEEEEEeCCCC---HHHHHHHHH
Confidence 235788999987 5664 667779999998775533 255555554
No 115
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.29 E-value=6.4e-12 Score=80.77 Aligned_cols=88 Identities=13% Similarity=0.124 Sum_probs=67.8
Q ss_pred cCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHc
Q 038822 33 AAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHAL 112 (162)
Q Consensus 33 ~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~ 112 (162)
.++++++|.|| ++|||.|... .+.+.++.++++++ + .++.|+.+ .+..+++.|
T Consensus 17 ~~~~~~lv~f~-~~~C~~C~~~-~~~~~~~~~~~~~~-~-~~~~v~~~-----------------------~~~~~~~~~ 69 (106)
T 3die_A 17 VESGVQLVDFW-ATACGPCKMI-APVLEELAADYEGK-A-DILKLDVD-----------------------ENPSTAAKY 69 (106)
T ss_dssp SCSSEEEEEEE-CSBCHHHHHH-HHHHHHHHHHTTTT-C-EEEEEETT-----------------------TCHHHHHHT
T ss_pred hcCCcEEEEEE-CCCCHHHHHH-hHHHHHHHHHhcCC-c-EEEEEECC-----------------------cCHHHHHhC
Confidence 36788888888 8999999997 99999999998754 7 78888774 245688899
Q ss_pred CCccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 113 GLELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 113 gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
++. ++|+ ++++++|+++..+.+... .+++.+.|++
T Consensus 70 ~v~--------~~Pt---~~~~~~G~~~~~~~g~~~---~~~l~~~l~~ 104 (106)
T 3die_A 70 EVM--------SIPT---LIVFKDGQPVDKVVGFQP---KENLAEVLDK 104 (106)
T ss_dssp TCC--------SBSE---EEEEETTEEEEEEESCCC---HHHHHHHHHT
T ss_pred CCc--------ccCE---EEEEeCCeEEEEEeCCCC---HHHHHHHHHH
Confidence 987 5664 777789999998776533 2566666654
No 116
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.28 E-value=2.2e-12 Score=85.09 Aligned_cols=85 Identities=9% Similarity=0.093 Sum_probs=66.1
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|+.. .|.+.++++++++ + .++.|..+. +..+++.|+
T Consensus 30 ~~k~vlv~F~-a~wC~~C~~~-~p~l~~l~~~~~~--v-~~~~vd~d~-----------------------~~~l~~~~~ 81 (116)
T 3qfa_C 30 GDKLVVVDFS-ATWCGPSKMI-KPFFHSLSEKYSN--V-IFLEVDVDD-----------------------CQDVASECE 81 (116)
T ss_dssp TTSCEEEEEE-CTTCHHHHHH-HHHHHHHHTTCTT--S-EEEEEETTT-----------------------THHHHHHTT
T ss_pred CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHCCC--C-EEEEEECCC-----------------------CHHHHHHcC
Confidence 6888888888 8999999998 9999999988754 7 888888752 457889999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+. ++|+ ++++++|+++..+.+. . .+++++.|++
T Consensus 82 v~--------~~Pt---~~~~~~G~~~~~~~G~-~---~~~l~~~l~~ 114 (116)
T 3qfa_C 82 VK--------SMPT---FQFFKKGQKVGEFSGA-N---KEKLEATINE 114 (116)
T ss_dssp CC--------SSSE---EEEESSSSEEEEEESC-C---HHHHHHHHHH
T ss_pred Cc--------cccE---EEEEeCCeEEEEEcCC-C---HHHHHHHHHH
Confidence 87 5664 6666799999888765 3 3566666653
No 117
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.26 E-value=2.7e-12 Score=85.89 Aligned_cols=97 Identities=10% Similarity=0.068 Sum_probs=69.2
Q ss_pred ceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHH---HHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEE
Q 038822 24 LQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGF---IEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKF 100 (162)
Q Consensus 24 g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l---~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~ 100 (162)
.+.+++++. +|++++|.|| ++|||.|+.. .+.+ ..+.+.++. ++ .++.|..+.
T Consensus 17 ~~~~~~~~~-~~k~vlv~f~-a~wC~~C~~~-~~~~~~~~~~~~~~~~-~~-~~~~vd~~~------------------- 72 (130)
T 2kuc_A 17 PEALKRAEV-EDKLLFVDCF-TTWCGPCKRL-SKVVFKDSLVADYFNR-HF-VNLKMDMEK------------------- 72 (130)
T ss_dssp HHHHHHHHH-HSSCEEEEEC-CTTCTHHHHH-HHHGGGCHHHHHHHHH-HS-EEEEECSSS-------------------
T ss_pred HHHHHHHHh-cCCeEEEEEE-CCCCccHHHH-HHHhcCcHHHHHHHhc-Ce-EEEEEecCC-------------------
Confidence 345666665 7898988888 8999999997 8888 555555443 45 666666653
Q ss_pred EEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHHHh
Q 038822 101 LADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 101 l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
|.+..+++.|++. ++|+ ++++| +|++++.+.+.... +++.+.|+
T Consensus 73 --~~~~~~~~~~~v~--------~~Pt---~~~~d~~G~~~~~~~G~~~~---~~l~~~l~ 117 (130)
T 2kuc_A 73 --GEGVELRKKYGVH--------AYPT---LLFINSSGEVVYRLVGAEDA---PELLKKVK 117 (130)
T ss_dssp --TTHHHHHHHTTCC--------SSCE---EEEECTTSCEEEEEESCCCH---HHHHHHHH
T ss_pred --cchHHHHHHcCCC--------CCCE---EEEECCCCcEEEEecCCCCH---HHHHHHHH
Confidence 3456789999987 5664 88887 99999988765332 45555554
No 118
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.26 E-value=9.4e-12 Score=80.00 Aligned_cols=87 Identities=14% Similarity=0.182 Sum_probs=65.5
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|... .+.+.++.+++++. + .++.|+.+. +..+++.|+
T Consensus 16 ~~~~~~v~f~-~~~C~~C~~~-~~~l~~~~~~~~~~-v-~~~~v~~~~-----------------------~~~~~~~~~ 68 (105)
T 1nsw_A 16 GDGPVLVDFW-AAWCGPCRMM-APVLEEFAEAHADK-V-TVAKLNVDE-----------------------NPETTSQFG 68 (105)
T ss_dssp SSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHSTTT-C-EEEEEETTT-----------------------CHHHHHHTT
T ss_pred CCCcEEEEEE-CCCCHHHHHH-HHHHHHHHHHhcCC-c-EEEEEECcC-----------------------CHHHHHHcC
Confidence 5677888887 8999999997 99999999888653 7 888887653 356888999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+. ++|+ ++++++|+++..+.+.... +++.+.|++
T Consensus 69 v~--------~~Pt---~~~~~~G~~~~~~~G~~~~---~~l~~~l~~ 102 (105)
T 1nsw_A 69 IM--------SIPT---LILFKGGRPVKQLIGYQPK---EQLEAQLAD 102 (105)
T ss_dssp CC--------SSSE---EEEEETTEEEEEEESCCCH---HHHHHHTTT
T ss_pred Cc--------cccE---EEEEeCCeEEEEEecCCCH---HHHHHHHHH
Confidence 87 5664 7777899999888765432 455555544
No 119
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.25 E-value=7.3e-12 Score=81.54 Aligned_cols=86 Identities=14% Similarity=0.154 Sum_probs=64.3
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|... .+.+.++.+++++ .+ .++.|+.+. +..+++.|+
T Consensus 22 ~~~~~vv~f~-~~~C~~C~~~-~~~l~~~~~~~~~-~~-~~~~v~~~~-----------------------~~~~~~~~~ 74 (112)
T 1t00_A 22 NDKPVLVDFW-AAWCGPCRQI-APSLEAIAAEYGD-KI-EIVKLNIDE-----------------------NPGTAAKYG 74 (112)
T ss_dssp CSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTT-TC-EEEEEETTT-----------------------CHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCHhHHhc-CHHHHHHHHHhcC-Ce-EEEEEEcCC-----------------------CHHHHHhCC
Confidence 4677888887 8999999997 9999999988865 37 888888653 356889999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
+. ++|+ ++++++|++++.+.+.... +++.+.|+
T Consensus 75 v~--------~~Pt---~~~~~~G~~~~~~~G~~~~---~~l~~~l~ 107 (112)
T 1t00_A 75 VM--------SIPT---LNVYQGGEVAKTIVGAKPK---AAIVRDLE 107 (112)
T ss_dssp CC--------SSSE---EEEEETTEEEEEEESCCCH---HHHHHHTH
T ss_pred CC--------cccE---EEEEeCCEEEEEEeCCCCH---HHHHHHHH
Confidence 87 5663 5566699999888765432 44444443
No 120
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.25 E-value=9e-12 Score=81.15 Aligned_cols=86 Identities=10% Similarity=0.198 Sum_probs=63.4
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|+.. .|.+.++.++++..++ .++.|..+. +..+++.|+
T Consensus 20 ~~~~~~v~f~-a~wC~~C~~~-~~~~~~~~~~~~~~~~-~~~~vd~~~-----------------------~~~~~~~~~ 73 (112)
T 3d6i_A 20 GDKLIVLYFH-TSWAEPCKAL-KQVFEAISNEPSNSNV-SFLSIDADE-----------------------NSEISELFE 73 (112)
T ss_dssp TTCCEEEEEE-CCC--CHHHH-HHHHHHHHHCGGGTTS-EEEEEETTT-----------------------CHHHHHHTT
T ss_pred CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHhcCCCCE-EEEEEeccc-----------------------CHHHHHHcC
Confidence 3788888888 8999999997 9999999988765678 888888764 246889999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
+. ++|+ ++++++|+++..+.+... .++.+.++
T Consensus 74 v~--------~~Pt---~~~~~~G~~~~~~~G~~~----~~l~~~l~ 105 (112)
T 3d6i_A 74 IS--------AVPY---FIIIHKGTILKELSGADP----KEYVSLLE 105 (112)
T ss_dssp CC--------SSSE---EEEEETTEEEEEECSCCH----HHHHHHHH
T ss_pred CC--------cccE---EEEEECCEEEEEecCCCH----HHHHHHHH
Confidence 87 5664 666679999988876522 23555554
No 121
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.25 E-value=8.3e-12 Score=80.53 Aligned_cols=87 Identities=10% Similarity=0.149 Sum_probs=65.5
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
.+++++|.|| ++|||.|... .+.+.++++++++ ++ .++.|+.+. +..+++.|+
T Consensus 18 ~~~~~lv~f~-~~~C~~C~~~-~~~l~~~~~~~~~-~~-~~~~v~~~~-----------------------~~~~~~~~~ 70 (107)
T 1dby_A 18 SSVPVLVDFW-APWCGPCRII-APVVDEIAGEYKD-KL-KCVKLNTDE-----------------------SPNVASEYG 70 (107)
T ss_dssp CSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTT-TC-EEEEEETTT-----------------------CHHHHHHHT
T ss_pred CCCcEEEEEE-CCCCHhHHHH-HHHHHHHHHHhCC-ce-EEEEEECCC-----------------------CHHHHHHCC
Confidence 4677888887 8999999997 9999999988865 37 788887653 357889999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+. ++|+ ++++++|++++.+.+.... +++.+.|++
T Consensus 71 v~--------~~Pt---~~~~~~G~~~~~~~G~~~~---~~l~~~l~~ 104 (107)
T 1dby_A 71 IR--------SIPT---IMVFKGGKKCETIIGAVPK---ATIVQTVEK 104 (107)
T ss_dssp CC--------SSCE---EEEESSSSEEEEEESCCCH---HHHHHHHHH
T ss_pred CC--------cCCE---EEEEeCCEEEEEEeCCCCH---HHHHHHHHH
Confidence 87 5663 6666799999888765442 455555543
No 122
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.24 E-value=4e-12 Score=84.12 Aligned_cols=110 Identities=14% Similarity=0.152 Sum_probs=71.8
Q ss_pred CCCCCCCCCeeeeeeecCCCceeEehhhh-cCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCH
Q 038822 4 IAVGDPLPDGTLVYFDEQDQLQQVSVHSL-AAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDP 82 (162)
Q Consensus 4 l~~G~~~P~f~l~~~~~~~~g~~~~l~~~-~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~ 82 (162)
...|.+.|.+.+. +.+.-.-.+.+. .++++++|.|| ++|||.|... .+.+.++.+++++ + .++.|+.+.
T Consensus 6 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~vv~f~-~~~C~~C~~~-~~~l~~~~~~~~~--~-~~~~vd~~~- 75 (122)
T 2vlu_A 6 TAAAVAAEVISVH----SLEQWTMQIEEANTAKKLVVIDFT-ASWCGPCRIM-APVFADLAKKFPN--A-VFLKVDVDE- 75 (122)
T ss_dssp ------CCCEEEC----SHHHHHHHHHHHHHTTCCEEEEEE-CTTCHHHHHH-HHHHHHHHHHCTT--S-EEEEEETTT-
T ss_pred cccCCCCcceecc----CHHHHHHHHHHhhccCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHCCC--c-EEEEEECCC-
Confidence 4556666666665 322222223321 15788888888 8999999997 9999999988764 7 888888753
Q ss_pred HHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 83 FVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
+..+++.|++. ++|+ ++++.+|+++..+.+.. . +++.+.|+
T Consensus 76 ----------------------~~~~~~~~~v~--------~~Pt---~~~~~~G~~~~~~~G~~-~---~~l~~~l~ 116 (122)
T 2vlu_A 76 ----------------------LKPIAEQFSVE--------AMPT---FLFMKEGDVKDRVVGAI-K---EELTAKVG 116 (122)
T ss_dssp ----------------------CHHHHHHTTCC--------SSSE---EEEEETTEEEEEEESSC-H---HHHHHHHH
T ss_pred ----------------------CHHHHHHcCCC--------cccE---EEEEeCCEEEEEEeCcC-H---HHHHHHHH
Confidence 35688999987 5663 55556999998877544 2 45555554
No 123
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.23 E-value=8.1e-12 Score=81.33 Aligned_cols=86 Identities=14% Similarity=0.177 Sum_probs=64.4
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|+.. .|.+.+++++++ ++ .++.|..++ .+..++++|+
T Consensus 23 ~~~~vlv~f~-a~wC~~C~~~-~~~l~~~~~~~~--~v-~~~~vd~~~----------------------~~~~~~~~~~ 75 (111)
T 2pu9_C 23 GDKPVVLDMF-TQWCGPSKAM-APKYEKLAEEYL--DV-IFLKLDCNQ----------------------ENKTLAKELG 75 (111)
T ss_dssp TTSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHCT--TS-EEEEEECSS----------------------TTHHHHHHHC
T ss_pred CCCEEEEEEE-CCcCHhHHHH-CHHHHHHHHHCC--Ce-EEEEEecCc----------------------chHHHHHHcC
Confidence 5788888888 7999999998 999999998875 47 888888762 2467889999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+. ++|+ +++..+|+++..+.+.. .+++.+.|+.
T Consensus 76 v~--------~~Pt---~~~~~~G~~~~~~~G~~----~~~l~~~l~~ 108 (111)
T 2pu9_C 76 IR--------VVPT---FKILKENSVVGEVTGAK----YDKLLEAIQA 108 (111)
T ss_dssp CS--------BSSE---EEEESSSSEEEEEESSC----HHHHHHHHHH
T ss_pred CC--------eeeE---EEEEeCCcEEEEEcCCC----HHHHHHHHHH
Confidence 87 5662 44444999998877542 2455555543
No 124
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.23 E-value=7.9e-12 Score=81.44 Aligned_cols=85 Identities=12% Similarity=0.154 Sum_probs=65.0
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|+.. .|.+.++.++++ ++ .++.|..+ .+..+++.|+
T Consensus 23 ~~k~vlv~f~-a~wC~~C~~~-~p~l~~l~~~~~--~~-~~~~vd~~-----------------------~~~~l~~~~~ 74 (109)
T 3f3q_A 23 QDKLVVVDFY-ATWCGPCKMI-APMIEKFSEQYP--QA-DFYKLDVD-----------------------ELGDVAQKNE 74 (109)
T ss_dssp SSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHCT--TS-EEEEEETT-----------------------TCHHHHHHTT
T ss_pred cCCEEEEEEE-CCcCHhHHHH-HHHHHHHHHHCC--CC-EEEEEECC-----------------------CCHHHHHHcC
Confidence 4777888887 8999999998 999999998875 46 78777764 3467889999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+. ++|+ ++++++|+++..+.+. .. +++++.+++
T Consensus 75 v~--------~~Pt---~~~~~~G~~~~~~~G~-~~---~~l~~~i~~ 107 (109)
T 3f3q_A 75 VS--------AMPT---LLLFKNGKEVAKVVGA-NP---AAIKQAIAA 107 (109)
T ss_dssp CC--------SSSE---EEEEETTEEEEEEESS-CH---HHHHHHHHH
T ss_pred CC--------ccCE---EEEEECCEEEEEEeCC-CH---HHHHHHHHh
Confidence 87 5664 7777799999988765 22 566666654
No 125
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.23 E-value=9.2e-12 Score=83.13 Aligned_cols=85 Identities=12% Similarity=0.182 Sum_probs=64.1
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
+++++||.|| ++|||.|... .+.+.++.++++ ++ .++.|+.+ .+.+++++|+
T Consensus 37 ~~k~vvv~f~-a~wC~~C~~~-~~~l~~l~~~~~--~v-~~~~vd~d-----------------------~~~~l~~~~~ 88 (124)
T 1xfl_A 37 SKTLVVVDFT-ASWCGPCRFI-APFFADLAKKLP--NV-LFLKVDTD-----------------------ELKSVASDWA 88 (124)
T ss_dssp TTCEEEEEEE-CTTCHHHHHH-HHHHHHHHHHCS--SE-EEEEEETT-----------------------TSHHHHHHTT
T ss_pred cCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHCC--Cc-EEEEEECc-----------------------cCHHHHHHcC
Confidence 5788888888 8999999998 999999988875 57 78888774 2457889999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+. ++|+ ++++.+|+++..+.+. . .+++.+.|++
T Consensus 89 v~--------~~Pt---~~~~~~G~~~~~~~G~-~---~~~l~~~l~~ 121 (124)
T 1xfl_A 89 IQ--------AMPT---FMFLKEGKILDKVVGA-K---KDELQSTIAK 121 (124)
T ss_dssp CC--------SSSE---EEEEETTEEEEEEESC-C---HHHHHHHHHH
T ss_pred CC--------ccCE---EEEEECCEEEEEEeCC-C---HHHHHHHHHH
Confidence 87 5663 5555699999888763 2 2455555543
No 126
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.22 E-value=9.3e-12 Score=82.59 Aligned_cols=87 Identities=13% Similarity=0.201 Sum_probs=67.0
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|... .+.+.++.+++++.++ .++.|+.+. +..+++.|+
T Consensus 32 ~~k~vvv~f~-a~~C~~C~~~-~~~l~~l~~~~~~~~v-~~~~vd~d~-----------------------~~~~~~~~~ 85 (121)
T 2j23_A 32 GDKVVVIDFW-ATWCGPCKMI-GPVFEKISDTPAGDKV-GFYKVDVDE-----------------------QSQIAQEVG 85 (121)
T ss_dssp SSSCEEEEEE-CTTCSTHHHH-HHHHHHHHTSTHHHHS-EEEEEETTT-----------------------CHHHHHHHT
T ss_pred CCCEEEEEEE-CCCCHhHHHH-HHHHHHHHHHCcCCcE-EEEEEECcC-----------------------CHHHHHHcC
Confidence 5677888887 8999999997 9999999998887678 888888753 356889999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+. ++|+ ++++++|+++....+. . .+++.+.|++
T Consensus 86 v~--------~~Pt---~~~~~~G~~~~~~~G~-~---~~~l~~~l~~ 118 (121)
T 2j23_A 86 IR--------AMPT---FVFFKNGQKIDTVVGA-D---PSKLQAAITQ 118 (121)
T ss_dssp CC--------SSSE---EEEEETTEEEEEEESS-C---HHHHHHHHHH
T ss_pred CC--------cccE---EEEEECCeEEeeEcCC-C---HHHHHHHHHH
Confidence 87 5663 6666799999887765 3 3566666553
No 127
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.22 E-value=2.4e-11 Score=79.86 Aligned_cols=86 Identities=12% Similarity=0.197 Sum_probs=65.3
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|+.. .+.+.++.+++++ + .++.|+.+. +..++++|+
T Consensus 29 ~~k~vvv~F~-a~wC~~C~~~-~p~l~~~~~~~~~--v-~~~~vd~~~-----------------------~~~l~~~~~ 80 (114)
T 2oe3_A 29 QNDKLVIDFY-ATWCGPCKMM-QPHLTKLIQAYPD--V-RFVKCDVDE-----------------------SPDIAKECE 80 (114)
T ss_dssp HCSEEEEEEE-CTTCHHHHHT-HHHHHHHHHHCTT--S-EEEEEETTT-----------------------CHHHHHHTT
T ss_pred CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHCCC--C-EEEEEECCC-----------------------CHHHHHHCC
Confidence 4677888887 8999999998 9999999988754 7 888887652 346889999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhcC
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKSL 162 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~l 162 (162)
+. ++|+ ++++.+|+++..+.+.. . ++++++|+++
T Consensus 81 v~--------~~Pt---~~~~~~G~~~~~~~G~~-~---~~l~~~l~~~ 114 (114)
T 2oe3_A 81 VT--------AMPT---FVLGKDGQLIGKIIGAN-P---TALEKGIKDL 114 (114)
T ss_dssp CC--------SBSE---EEEEETTEEEEEEESSC-H---HHHHHHHHTC
T ss_pred CC--------cccE---EEEEeCCeEEEEEeCCC-H---HHHHHHHHhC
Confidence 87 5663 55556999998887644 3 6677766653
No 128
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.22 E-value=6.9e-12 Score=84.24 Aligned_cols=87 Identities=17% Similarity=0.254 Sum_probs=64.6
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|... .+.+.++++++++ ++ .++.|+.+. +..+++.|+
T Consensus 39 ~~k~vlv~F~-a~wC~~C~~~-~p~l~~l~~~~~~-~v-~~~~vd~~~-----------------------~~~l~~~~~ 91 (128)
T 2o8v_B 39 ADGAILVDFW-AEWCGPAKMI-APILDEIADEYQG-KL-TVAKLNIDQ-----------------------NPGTAPKYG 91 (128)
T ss_dssp CSSEEEEEEE-CSSCHHHHHT-HHHHHHHHHHTTT-TE-EEEEEETTT-----------------------CCTTSGGGT
T ss_pred cCCEEEEEEE-CCCCHHHHHH-hHHHHHHHHHhcC-Ce-EEEEEECCC-----------------------CHHHHHHcC
Confidence 5677777777 8999999998 9999999988864 37 788888653 235778888
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+. ++|+ ++++.+|++++.+.+.... +++.+.|++
T Consensus 92 v~--------~~Pt---~~~~~~G~~~~~~~G~~~~---~~l~~~l~~ 125 (128)
T 2o8v_B 92 IR--------GIPT---LLLFKNGEVAATKVGALSK---GQLKEFLDA 125 (128)
T ss_dssp CC--------SSSE---EEEEETTEEEEEEESCCCH---HHHHHHHHH
T ss_pred CC--------ccCE---EEEEeCCEEEEEEcCCCCH---HHHHHHHHH
Confidence 87 5664 7777899999888765332 455555543
No 129
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.22 E-value=4e-12 Score=86.11 Aligned_cols=84 Identities=14% Similarity=0.211 Sum_probs=64.5
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|+.. .+.+.++.++++ ++ .++.|+.+. +..+++.|+
T Consensus 45 ~~k~vvv~f~-a~wC~~C~~~-~~~l~~l~~~~~--~v-~~~~v~~~~-----------------------~~~~~~~~~ 96 (139)
T 3d22_A 45 DGKIVLANFS-ARWCGPSRQI-APYYIELSENYP--SL-MFLVIDVDE-----------------------LSDFSASWE 96 (139)
T ss_dssp HTCCEEEEEE-CTTCHHHHHH-HHHHHHHHHHCT--TS-EEEEEETTT-----------------------SHHHHHHTT
T ss_pred cCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHCC--CC-EEEEEeCcc-----------------------cHHHHHHcC
Confidence 5888888888 7999999998 999999998873 57 888888752 356889999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
+. ++|+ ++++.+|+++..+.+. . .+++++.|+
T Consensus 97 v~--------~~Pt---~~~~~~G~~~~~~~G~-~---~~~l~~~l~ 128 (139)
T 3d22_A 97 IK--------ATPT---FFFLRDGQQVDKLVGA-N---KPELHKKIT 128 (139)
T ss_dssp CC--------EESE---EEEEETTEEEEEEESC-C---HHHHHHHHH
T ss_pred CC--------cccE---EEEEcCCeEEEEEeCC-C---HHHHHHHHH
Confidence 87 5663 6666799999988765 2 245555554
No 130
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.21 E-value=1.2e-11 Score=80.33 Aligned_cols=85 Identities=14% Similarity=0.179 Sum_probs=64.8
Q ss_pred CCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCC
Q 038822 35 GKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGL 114 (162)
Q Consensus 35 gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 114 (162)
+++++|.|| ++|||.|... .+.+.++.+++++ ++ .++.|+.+. +..+++.|++
T Consensus 24 ~~~~vv~f~-~~~C~~C~~~-~~~l~~~~~~~~~-~~-~~~~vd~~~-----------------------~~~~~~~~~v 76 (112)
T 1ep7_A 24 HKPIVVDFT-ATWCGPCKMI-APLFETLSNDYAG-KV-IFLKVDVDA-----------------------VAAVAEAAGI 76 (112)
T ss_dssp TCCEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTT-TS-EEEEEETTT-----------------------THHHHHHHTC
T ss_pred CCeEEEEEE-CCCCHHHHHH-HHHHHHHHHHcCC-Ce-EEEEEECCc-----------------------hHHHHHHcCC
Confidence 788888888 8999999997 9999999988865 67 888888743 4678899998
Q ss_pred ccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 115 ELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
. ++|+ ++++.+|+++..+.+. . .+++.+.|++
T Consensus 77 ~--------~~Pt---~~~~~~G~~~~~~~G~-~---~~~l~~~l~~ 108 (112)
T 1ep7_A 77 T--------AMPT---FHVYKDGVKADDLVGA-S---QDKLKALVAK 108 (112)
T ss_dssp C--------BSSE---EEEEETTEEEEEEESC-C---HHHHHHHHHH
T ss_pred C--------cccE---EEEEECCeEEEEEcCC-C---HHHHHHHHHH
Confidence 7 5663 5555699999888765 3 2455555543
No 131
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.21 E-value=3.2e-11 Score=78.53 Aligned_cols=86 Identities=13% Similarity=0.210 Sum_probs=65.3
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|... .+.+.++.+++++. + .++.|+.+. +..+++.|+
T Consensus 24 ~~~~~lv~f~-~~~C~~C~~~-~~~l~~~~~~~~~~-v-~~~~v~~~~-----------------------~~~~~~~~~ 76 (115)
T 1thx_A 24 AEQPVLVYFW-ASWCGPCQLM-SPLINLAANTYSDR-L-KVVKLEIDP-----------------------NPTTVKKYK 76 (115)
T ss_dssp CSSCEEEEEE-CTTCTTHHHH-HHHHHHHHHHTTTT-C-EEEEEESTT-----------------------CHHHHHHTT
T ss_pred CCceEEEEEE-CCCCHHHHHh-HHHHHHHHHHhCCc-E-EEEEEEcCC-----------------------CHHHHHHcC
Confidence 5778888888 8999999997 99999999988754 7 888888753 246888999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
+. ++|+ ++++.+|++++.+.+.... +++.+.|+
T Consensus 77 v~--------~~Pt---~~~~~~G~~~~~~~g~~~~---~~l~~~l~ 109 (115)
T 1thx_A 77 VE--------GVPA---LRLVKGEQILDSTEGVISK---DKLLSFLD 109 (115)
T ss_dssp CC--------SSSE---EEEEETTEEEEEEESCCCH---HHHHHHHH
T ss_pred CC--------ceeE---EEEEcCCEEEEEecCCCCH---HHHHHHHH
Confidence 87 5664 6777899999987765332 45555554
No 132
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.21 E-value=1.9e-11 Score=80.78 Aligned_cols=87 Identities=11% Similarity=0.152 Sum_probs=65.7
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
.+++++|.|| ++|||.|+.. .+.+.++++++.+ ++ .++.|+.+. +.++++.|+
T Consensus 30 ~~k~vlv~f~-a~~C~~C~~~-~~~l~~~~~~~~~-~v-~~~~vd~d~-----------------------~~~l~~~~~ 82 (119)
T 1w4v_A 30 SETPVVVDFH-AQWCGPCKIL-GPRLEKMVAKQHG-KV-VMAKVDIDD-----------------------HTDLAIEYE 82 (119)
T ss_dssp CSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTT-SS-EEEEEETTT-----------------------THHHHHHTT
T ss_pred CCCcEEEEEE-CCCCHHHHHH-HHHHHHHHHHhcC-Ce-EEEEEeCCC-----------------------CHHHHHHcC
Confidence 4678888888 8999999997 9999999988865 47 888888653 356889999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+. ++|+ ++++.+|+++..+.+... .+++.++|++
T Consensus 83 v~--------~~Pt---~~~~~~G~~~~~~~G~~~---~~~l~~~l~~ 116 (119)
T 1w4v_A 83 VS--------AVPT---VLAMKNGDVVDKFVGIKD---EDQLEAFLKK 116 (119)
T ss_dssp CC--------SSSE---EEEEETTEEEEEEESCCC---HHHHHHHHHH
T ss_pred CC--------cccE---EEEEeCCcEEEEEcCCCC---HHHHHHHHHH
Confidence 87 5664 666689999988775433 2556655543
No 133
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.21 E-value=3.4e-11 Score=77.41 Aligned_cols=87 Identities=20% Similarity=0.237 Sum_probs=66.4
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|... .+.+.++.+++++ ++ .++.|+.+. +..+++.|+
T Consensus 19 ~~~~~lv~f~-~~~C~~C~~~-~~~~~~~~~~~~~-~~-~~~~v~~~~-----------------------~~~~~~~~~ 71 (107)
T 2i4a_A 19 ASGLVLVDFW-AEWCGPCKMI-GPALGEIGKEFAG-KV-TVAKVNIDD-----------------------NPETPNAYQ 71 (107)
T ss_dssp CSSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTT-SE-EEEEEETTT-----------------------CCHHHHHTT
T ss_pred CCCEEEEEEE-CCCChhHHHH-hHHHHHHHHHhCC-cE-EEEEEECCC-----------------------CHHHHHhcC
Confidence 5778888888 8999999997 9999999999875 57 788887653 346889999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+. ++|+ ++++.+|+++..+.+.... +++.++|++
T Consensus 72 v~--------~~Pt---~~~~~~G~~~~~~~G~~~~---~~l~~~l~~ 105 (107)
T 2i4a_A 72 VR--------SIPT---LMLVRDGKVIDKKVGALPK---SQLKAWVES 105 (107)
T ss_dssp CC--------SSSE---EEEEETTEEEEEEESCCCH---HHHHHHHHH
T ss_pred CC--------ccCE---EEEEeCCEEEEEecCCCCH---HHHHHHHHh
Confidence 87 5664 6677899999887765332 566666654
No 134
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.20 E-value=1.8e-11 Score=81.24 Aligned_cols=85 Identities=15% Similarity=0.212 Sum_probs=64.3
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|+.. .|.+.++.++++ ++ .++.|..++ .+..++++|+
T Consensus 36 ~~~~~vv~f~-a~wC~~C~~~-~~~l~~~~~~~~--~~-~~~~vd~~~----------------------~~~~~~~~~~ 88 (124)
T 1faa_A 36 GDKPVVLDMF-TQWCGPCKAM-APKYEKLAEEYL--DV-IFLKLDCNQ----------------------ENKTLAKELG 88 (124)
T ss_dssp TTSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHCT--TS-EEEEEECSS----------------------TTHHHHHHHC
T ss_pred CCCEEEEEEE-CCcCHhHHHH-hHHHHHHHHHCC--CC-EEEEEecCc----------------------chHHHHHHcC
Confidence 6888888888 8999999997 999999998875 57 888887762 2467889999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
+. ++|+ ++++++|+++..+.+.. . +++.+.++
T Consensus 89 v~--------~~Pt---~~~~~~G~~~~~~~G~~-~---~~l~~~i~ 120 (124)
T 1faa_A 89 IR--------VVPT---FKILKENSVVGEVTGAK-Y---DKLLEAIQ 120 (124)
T ss_dssp CS--------SSSE---EEEEETTEEEEEEESSC-H---HHHHHHHH
T ss_pred CC--------eeeE---EEEEeCCcEEEEEcCCC-H---HHHHHHHH
Confidence 87 5663 45555999998877543 2 45555554
No 135
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.20 E-value=2.2e-11 Score=79.25 Aligned_cols=88 Identities=10% Similarity=0.162 Sum_probs=63.9
Q ss_pred hhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchH
Q 038822 29 VHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKY 108 (162)
Q Consensus 29 l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 108 (162)
|++. +++++||.|| ++||++|+.. .|.+.++.+++. ++ .++.|..| .+..+
T Consensus 15 l~~~-~~k~vvv~F~-a~wC~~C~~~-~p~~~~~~~~~~--~~-~~~~vd~d-----------------------~~~~l 65 (105)
T 3zzx_A 15 LNEA-GNKLVVIDFY-ATWCGPCKMI-APKLEELSQSMS--DV-VFLKVDVD-----------------------ECEDI 65 (105)
T ss_dssp HHHT-TTSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHCT--TE-EEEEEETT-----------------------TCHHH
T ss_pred HHhc-CCCEEEEEEE-CCCCCCccCC-CcchhhhhhccC--Ce-EEEEEecc-----------------------cCHHH
Confidence 4553 6788888888 8999999997 999999887764 45 56656543 34578
Q ss_pred HHHcCCccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 109 THALGLELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 109 ~~~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
++.|++. ++|+ +++..+|+++..+.|. . .+++.+.++
T Consensus 66 ~~~~~V~--------~~PT---~~~~~~G~~v~~~~G~-~---~~~l~~~i~ 102 (105)
T 3zzx_A 66 AQDNQIA--------CMPT---FLFMKNGQKLDSLSGA-N---YDKLLELVE 102 (105)
T ss_dssp HHHTTCC--------BSSE---EEEEETTEEEEEEESC-C---HHHHHHHHH
T ss_pred HHHcCCC--------eecE---EEEEECCEEEEEEeCc-C---HHHHHHHHH
Confidence 9999997 6773 6666799999988763 2 245555554
No 136
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.20 E-value=1.8e-11 Score=78.53 Aligned_cols=87 Identities=13% Similarity=0.184 Sum_probs=65.3
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
.+++++|.|| ++|||.|... .+.+.++++++++ ++ .++.|+.+. +..+++.|+
T Consensus 17 ~~~~~~v~f~-~~~C~~C~~~-~~~~~~~~~~~~~-~~-~~~~v~~~~-----------------------~~~~~~~~~ 69 (105)
T 1fb6_A 17 SEVPVMVDFW-APWCGPCKLI-APVIDELAKEYSG-KI-AVYKLNTDE-----------------------APGIATQYN 69 (105)
T ss_dssp CSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTT-TC-EEEEEETTT-----------------------CHHHHHHTT
T ss_pred CCCcEEEEEE-CCCChHHHHH-HHHHHHHHHHhcC-ce-EEEEEcCcc-----------------------hHHHHHhCC
Confidence 4677888888 8999999997 9999999988865 37 788777653 346889999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+. ++|+ ++++++|+++..+.+.... +++.+.+++
T Consensus 70 v~--------~~Pt---~~~~~~g~~~~~~~G~~~~---~~l~~~l~~ 103 (105)
T 1fb6_A 70 IR--------SIPT---VLFFKNGERKESIIGAVPK---STLTDSIEK 103 (105)
T ss_dssp CC--------SSSE---EEEEETTEEEEEEEECCCH---HHHHHHHHH
T ss_pred CC--------cccE---EEEEeCCeEEEEEecCCCH---HHHHHHHHh
Confidence 87 5663 5666699999988876443 556666553
No 137
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.19 E-value=3.9e-11 Score=77.00 Aligned_cols=90 Identities=13% Similarity=0.261 Sum_probs=66.5
Q ss_pred hhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchH
Q 038822 29 VHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKY 108 (162)
Q Consensus 29 l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 108 (162)
+++. ++++++|.|| ++|||.|... .+.+.++.++++ .++ .++.|+.+ .+..+
T Consensus 15 l~~~-~~~~~vv~f~-~~~C~~C~~~-~~~l~~~~~~~~-~~~-~~~~v~~~-----------------------~~~~~ 66 (106)
T 1xwb_A 15 LTKA-SGKLVVLDFF-ATWCGPCKMI-SPKLVELSTQFA-DNV-VVLKVDVD-----------------------ECEDI 66 (106)
T ss_dssp HHHH-TTSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHTT-TTE-EEEEEETT-----------------------TCHHH
T ss_pred HHhc-CCCEEEEEEE-CCcCHHHHHh-hHHHHHHHHHhC-CCe-EEEEEecc-----------------------chHHH
Confidence 4443 6888888888 8999999997 999999998876 356 77777765 24568
Q ss_pred HHHcCCccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 109 THALGLELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 109 ~~~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
++.|++. ++|+ ++++++|+++..+.+ .. .+++.+.+++
T Consensus 67 ~~~~~v~--------~~Pt---~~~~~~G~~~~~~~g-~~---~~~l~~~i~~ 104 (106)
T 1xwb_A 67 AMEYNIS--------SMPT---FVFLKNGVKVEEFAG-AN---AKRLEDVIKA 104 (106)
T ss_dssp HHHTTCC--------SSSE---EEEEETTEEEEEEES-CC---HHHHHHHHHH
T ss_pred HHHcCCC--------cccE---EEEEcCCcEEEEEcC-CC---HHHHHHHHHH
Confidence 8999987 5663 555569999988876 22 2556666654
No 138
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.19 E-value=1.6e-11 Score=79.21 Aligned_cols=86 Identities=13% Similarity=0.074 Sum_probs=57.7
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|+.. .|.+.++++++. ++ .++.|..+. +..++++|+
T Consensus 17 ~~~~vlv~f~-a~wC~~C~~~-~p~~~~~~~~~~--~~-~~~~vd~~~-----------------------~~~l~~~~~ 68 (105)
T 4euy_A 17 EQQLVLLFIK-TENCGVCDVM-LRKVNYVLENYN--YV-EKIEILLQD-----------------------MQEIAGRYA 68 (105)
T ss_dssp CSSEEEEEEE-ESSCHHHHHH-HHHHHHHHHTCT--TE-EEEEEEECC-----------------------C--------
T ss_pred cCCCEEEEEe-CCCCcchHHH-HHHHHHHHHHcC--Cc-eEEEEECCC-----------------------CHHHHHhcC
Confidence 5777888887 8999999997 999999998873 56 777777642 236778888
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+. ++|+ ++++++|+++....+... .+++.+.|++
T Consensus 69 v~--------~~Pt---~~~~~~G~~~~~~~g~~~---~~~l~~~l~~ 102 (105)
T 4euy_A 69 VF--------TGPT---VLLFYNGKEILRESRFIS---LENLERTIQL 102 (105)
T ss_dssp -C--------CCCE---EEEEETTEEEEEEESSCC---HHHHHHHHHT
T ss_pred CC--------CCCE---EEEEeCCeEEEEEeCCcC---HHHHHHHHHH
Confidence 87 5664 777789999988876543 2566666654
No 139
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.19 E-value=7.9e-11 Score=88.91 Aligned_cols=77 Identities=9% Similarity=0.092 Sum_probs=62.2
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
+++++||.|| ++|||+|+.. .|.+.++.+++++ .+ .++.|..+. +..+++.|+
T Consensus 25 ~~~~v~v~f~-a~wC~~C~~~-~p~~~~~~~~~~~-~~-~~~~vd~~~-----------------------~~~~~~~~~ 77 (287)
T 3qou_A 25 MTTPVLFYFW-SERSQHCLQL-TPILESLAAQYNG-QF-ILAKLDCDA-----------------------EQMIAAQFG 77 (287)
T ss_dssp TTSCEEEEEE-CTTCTTTTTT-HHHHHHHHHHHTS-SS-EEEEEETTT-----------------------CHHHHHTTT
T ss_pred CCCeEEEEEE-CCCChHHHHH-HHHHHHHHHHcCC-Ce-EEEEEeCcc-----------------------CHHHHHHcC
Confidence 4788988888 8999999998 9999999999975 37 788887753 237889999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCC
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGG 148 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~ 148 (162)
+. ++|+ ++++.+|+++..+.+...
T Consensus 78 v~--------~~Pt---~~~~~~G~~~~~~~g~~~ 101 (287)
T 3qou_A 78 LR--------AIPT---VYLFQNGQPVDGFQGPQP 101 (287)
T ss_dssp CC--------SSSE---EEEEETTEEEEEEESCCC
T ss_pred CC--------CCCe---EEEEECCEEEEEeeCCCC
Confidence 87 5664 777789999988876533
No 140
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.18 E-value=3e-11 Score=78.01 Aligned_cols=87 Identities=18% Similarity=0.296 Sum_probs=64.6
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|+.. .+.+.++++++++ .+ .++.|+.+. +..+++.|+
T Consensus 19 ~~~~~~v~f~-~~~C~~C~~~-~~~l~~~~~~~~~-~~-~~~~v~~~~-----------------------~~~~~~~~~ 71 (108)
T 2trx_A 19 ADGAILVDFW-AEWCGPCKMI-APILDEIADEYQG-KL-TVAKLNIDQ-----------------------NPGTAPKYG 71 (108)
T ss_dssp CSSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTT-TE-EEEEEETTT-----------------------CTTHHHHTT
T ss_pred cCCeEEEEEE-CCCCHhHHHH-HHHHHHHHHHhCC-Cc-EEEEEECCC-----------------------CHHHHHHcC
Confidence 5677877777 8999999997 9999999988864 36 777777653 245889999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+. ++|+ ++++.+|+++..+.+.... +++.+.|++
T Consensus 72 v~--------~~Pt---~~~~~~G~~~~~~~G~~~~---~~l~~~l~~ 105 (108)
T 2trx_A 72 IR--------GIPT---LLLFKNGEVAATKVGALSK---GQLKEFLDA 105 (108)
T ss_dssp CC--------SSSE---EEEEETTEEEEEEESCCCH---HHHHHHHHH
T ss_pred Cc--------ccCE---EEEEeCCEEEEEEecCCCH---HHHHHHHHH
Confidence 87 5664 6777899999888765332 455555543
No 141
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.17 E-value=3.3e-11 Score=77.08 Aligned_cols=85 Identities=12% Similarity=0.178 Sum_probs=64.9
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|... .+.+.++.++++ ++ .++.|+.+. +..+++.|+
T Consensus 18 ~~~~~~v~f~-~~~C~~C~~~-~~~l~~~~~~~~--~~-~~~~v~~~~-----------------------~~~~~~~~~ 69 (104)
T 2vim_A 18 KGRLIVVDFF-AQWCGPCRNI-APKVEALAKEIP--EV-EFAKVDVDQ-----------------------NEEAAAKYS 69 (104)
T ss_dssp TTSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHCT--TS-EEEEEETTT-----------------------CHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCHHHHHh-hHHHHHHHHHCC--CC-EEEEEeccC-----------------------CHHHHHHcC
Confidence 6788888888 8999999997 999999988875 67 888888752 346888999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+. ++|+ ++++++|+++..+.+. . .+++.+.+++
T Consensus 70 v~--------~~Pt---~~~~~~g~~~~~~~G~-~---~~~l~~~l~~ 102 (104)
T 2vim_A 70 VT--------AMPT---FVFIKDGKEVDRFSGA-N---ETKLRETITR 102 (104)
T ss_dssp CC--------SSSE---EEEEETTEEEEEEESS-C---HHHHHHHHHH
T ss_pred Cc--------cccE---EEEEeCCcEEEEEeCC-C---HHHHHHHHHh
Confidence 87 5663 6666699999888762 2 2556666654
No 142
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.17 E-value=4.8e-11 Score=79.84 Aligned_cols=87 Identities=9% Similarity=0.067 Sum_probs=63.6
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHh---CCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHH
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQS---KGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTH 110 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~---~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 110 (162)
.+++++|.|| ++||+.|+.. .|.+.++++++++ .++ .++.|..+. +..+++
T Consensus 24 ~~~~~lv~f~-a~wC~~C~~~-~~~~~~~~~~~~~~~~~~~-~~~~vd~~~-----------------------~~~l~~ 77 (133)
T 1x5d_A 24 SEDVWMVEFY-APWCGHCKNL-EPEWAAAASEVKEQTKGKV-KLAAVDATV-----------------------NQVLAS 77 (133)
T ss_dssp SSSEEEEEEE-CTTCHHHHTH-HHHHHHHHHHHHHHTTTSE-EEEEEETTT-----------------------CCHHHH
T ss_pred CCCeEEEEEE-CCCCHHHHhh-cHHHHHHHHHHHhhcCCcE-EEEEEECCC-----------------------CHHHHH
Confidence 4677777777 8999999997 9999999999973 346 677776542 357899
Q ss_pred HcCCccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 111 ALGLELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 111 ~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
.|++. ++|+ ++++++|+++..+.+... .+++.+.++
T Consensus 78 ~~~v~--------~~Pt---~~~~~~g~~~~~~~G~~~---~~~l~~~l~ 113 (133)
T 1x5d_A 78 RYGIR--------GFPT---IKIFQKGESPVDYDGGRT---RSDIVSRAL 113 (133)
T ss_dssp HHTCC--------SSSE---EEEEETTEEEEEECSCCS---HHHHHHHHH
T ss_pred hCCCC--------eeCe---EEEEeCCCceEEecCCCC---HHHHHHHHH
Confidence 99987 5664 888888998877765432 244444443
No 143
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.17 E-value=3.5e-11 Score=76.72 Aligned_cols=85 Identities=9% Similarity=0.123 Sum_probs=64.1
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|... .+.+.++.+++++ + .++.|+.+. +..+++.|+
T Consensus 15 ~~~~~~v~f~-~~~C~~C~~~-~~~~~~~~~~~~~--~-~~~~v~~~~-----------------------~~~~~~~~~ 66 (104)
T 2e0q_A 15 SHEIAVVDFW-AEWCAPCLIL-APIIEELAEDYPQ--V-GFGKLNSDE-----------------------NPDIAARYG 66 (104)
T ss_dssp HSSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHCTT--S-EEEEEETTT-----------------------CHHHHHHTT
T ss_pred cCCcEEEEEE-CCCChhHHHH-hHHHHHHHHHcCC--c-eEEEEECCC-----------------------CHHHHHhCC
Confidence 4677888887 8999999997 9999999888764 7 888888752 356889999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
+. ++|+ ++++.+|+++..+.+.... +++.+.++
T Consensus 67 v~--------~~Pt---~~~~~~g~~~~~~~g~~~~---~~l~~~l~ 99 (104)
T 2e0q_A 67 VM--------SLPT---VIFFKDGEPVDEIIGAVPR---EEIEIRIK 99 (104)
T ss_dssp CC--------SSCE---EEEEETTEEEEEEESCCCH---HHHHHHHH
T ss_pred cc--------ccCE---EEEEECCeEhhhccCCCCH---HHHHHHHH
Confidence 87 5663 6666899999887765332 45555554
No 144
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.16 E-value=2.4e-11 Score=79.83 Aligned_cols=88 Identities=11% Similarity=0.214 Sum_probs=65.3
Q ss_pred hhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchH
Q 038822 29 VHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKY 108 (162)
Q Consensus 29 l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 108 (162)
+++. ++++++|.|| ++|||.|+.. .+.+.++++++ ++ .++.|+.+. +..+
T Consensus 28 l~~~-~~~~~vv~f~-a~wC~~C~~~-~~~~~~~~~~~---~~-~~~~vd~~~-----------------------~~~~ 77 (117)
T 2xc2_A 28 LEQH-KNKLVVVDFF-ATWCGPCKTI-APLFKELSEKY---DA-IFVKVDVDK-----------------------LEET 77 (117)
T ss_dssp HHHT-TTSCEEEEEE-CTTCHHHHHH-HHHHHHHHTTS---SS-EEEEEETTT-----------------------SHHH
T ss_pred HHhC-CCCEEEEEEE-CCCCHhHHHH-hHHHHHHHHHc---Cc-EEEEEECCc-----------------------cHHH
Confidence 4443 6888888888 8999999997 99999888776 67 788887752 3568
Q ss_pred HHHcCCccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 109 THALGLELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 109 ~~~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
++.|++. ++|+ ++++++|+++..+.+. . .+++.+.|++
T Consensus 78 ~~~~~v~--------~~Pt---~~~~~~G~~~~~~~G~-~---~~~l~~~l~~ 115 (117)
T 2xc2_A 78 ARKYNIS--------AMPT---FIAIKNGEKVGDVVGA-S---IAKVEDMIKK 115 (117)
T ss_dssp HHHTTCC--------SSSE---EEEEETTEEEEEEESS-C---HHHHHHHHHH
T ss_pred HHHcCCC--------ccce---EEEEeCCcEEEEEeCC-C---HHHHHHHHHH
Confidence 8999987 5663 5555699999888763 2 2456666653
No 145
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.16 E-value=4.2e-11 Score=77.14 Aligned_cols=86 Identities=12% Similarity=0.185 Sum_probs=65.3
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|... .+.+.++.+++++ .+ .++.|..+ .+..+++.|+
T Consensus 20 ~~~~~lv~f~-~~~C~~C~~~-~~~~~~~~~~~~~-~~-~~~~v~~~-----------------------~~~~~~~~~~ 72 (109)
T 3tco_A 20 NNKLVLVDCW-AEWCAPCHLY-EPIYKKVAEKYKG-KA-VFGRLNVD-----------------------ENQKIADKYS 72 (109)
T ss_dssp HSSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTT-TS-EEEEEETT-----------------------TCHHHHHHTT
T ss_pred cCCeEEEEEE-CCCCHHHHhh-hHHHHHHHHHhCC-Cc-eEEEEccc-----------------------cCHHHHHhcC
Confidence 5788888888 8999999997 9999999998875 46 77777763 3457888999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
+. ++|+ ++++.+|+++..+.+.... +++.+.++
T Consensus 73 i~--------~~Pt---~~~~~~g~~~~~~~g~~~~---~~l~~~l~ 105 (109)
T 3tco_A 73 VL--------NIPT---TLIFVNGQLVDSLVGAVDE---DTLESTVN 105 (109)
T ss_dssp CC--------SSSE---EEEEETTEEEEEEESCCCH---HHHHHHHH
T ss_pred cc--------cCCE---EEEEcCCcEEEeeeccCCH---HHHHHHHH
Confidence 87 5664 6777899999988765332 45555554
No 146
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.16 E-value=4.8e-12 Score=88.82 Aligned_cols=106 Identities=9% Similarity=0.047 Sum_probs=62.8
Q ss_pred eEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHH---HHhHHHHHhCCCCeEEEEEcCCHHHHHHH--HHhCCCCCceEE
Q 038822 26 QVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGF---IEKADELQSKGVDEILCISVNDPFVMKAW--AKTFPKNKSVKF 100 (162)
Q Consensus 26 ~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l---~~~~~~~~~~~~~~v~~is~d~~~~~~~~--~~~~~~~~~~~~ 100 (162)
.+.++.. +||+++|.|| ++||++|+.. .+.+ .++.+.+++ ++ .++.|+.+........ ....+....+..
T Consensus 39 ~~~~a~~-~gk~vlv~F~-A~WC~~C~~~-~~~~~~~~~~~~~~~~-~~-~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~ 113 (172)
T 3f9u_A 39 GMEYARQ-HNKPVMLDFT-GYGCVNCRKM-ELAVWTDPKVSSIINN-DY-VLITLYVDNKTPLTEPVKIMENGTERTLRT 113 (172)
T ss_dssp HHHHHHH-TTCCEEEEEE-CTTCHHHHHH-HHHTTTSHHHHHHHHH-HC-EEEEEETTCCCEEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHH-cCCeEEEEEE-CCCCHHHHHH-HHHhcCCHHHHHHhcC-CE-EEEEEecCcccccchhhhhhhcchhhhhhh
Confidence 3444554 7899999888 9999999983 3333 445555544 67 8999998753211000 000000001122
Q ss_pred EEcCCchH-HHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecC
Q 038822 101 LADGSAKY-THALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESG 147 (162)
Q Consensus 101 l~D~~~~~-~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~ 147 (162)
+.|..+.+ .+.|++. ++|+ ++++| +|++++.+.|..
T Consensus 114 ~~~~~~~~~~~~~~v~--------~~Pt---~~lid~~G~~~~~~~G~~ 151 (172)
T 3f9u_A 114 VGDKWSYLQRVKFGAN--------AQPF---YVLIDNEGNPLNKSYAYD 151 (172)
T ss_dssp HHHHHHHHHHHHHSCC--------CSSE---EEEECTTSCBSSCCBCSC
T ss_pred hhhhhhHHHHHHcCCC--------Ccce---EEEECCCCCEEeeccCCC
Confidence 22222333 5889987 5665 88998 999999887653
No 147
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.16 E-value=3.9e-11 Score=76.98 Aligned_cols=89 Identities=10% Similarity=0.137 Sum_probs=67.2
Q ss_pred hhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchH
Q 038822 29 VHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKY 108 (162)
Q Consensus 29 l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 108 (162)
+++. ++++++|.|| ++|||.|... .+.+.++.+++++ + .++.|..+. +..+
T Consensus 15 l~~~-~~~~~~v~f~-~~~C~~C~~~-~~~~~~~~~~~~~--~-~~~~vd~~~-----------------------~~~~ 65 (105)
T 3m9j_A 15 LDAA-GDKLVVVDFS-ATWCGPCKMI-KPFFHSLSEKYSN--V-IFLEVDVDD-----------------------CQDV 65 (105)
T ss_dssp HHHT-TTSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHSTT--S-EEEEEETTT-----------------------CHHH
T ss_pred HHhc-CCCeEEEEEE-CCCChhhHHH-HHHHHHHHHHccC--e-EEEEEEhhh-----------------------hHHH
Confidence 3443 6888888888 8999999997 9999999988853 7 888887652 3568
Q ss_pred HHHcCCccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 109 THALGLELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 109 ~~~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
.+.|++. +.|+ ++++++|+++..+.+. . .+++.+.+++
T Consensus 66 ~~~~~v~--------~~Pt---~~~~~~g~~~~~~~g~-~---~~~l~~~l~~ 103 (105)
T 3m9j_A 66 ASESEVK--------SMPT---FQFFKKGQKVGEFSGA-N---KEKLEATINE 103 (105)
T ss_dssp HHHTTCC--------BSSE---EEEEETTEEEEEEESS-C---HHHHHHHHHH
T ss_pred HHHcCCC--------cCcE---EEEEECCeEEEEEeCC-C---HHHHHHHHHH
Confidence 8899987 5664 7777899999888765 3 2566666553
No 148
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.16 E-value=5.9e-11 Score=77.44 Aligned_cols=85 Identities=9% Similarity=0.132 Sum_probs=64.6
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|... .+.+.++.++++ ++ .++.|..+. +..+++.|+
T Consensus 25 ~~k~vlv~f~-a~~C~~C~~~-~~~l~~l~~~~~--~v-~~~~vd~~~-----------------------~~~~~~~~~ 76 (112)
T 1syr_A 25 QNELVIVDFF-AEWCGPCKRI-APFYEECSKTYT--KM-VFIKVDVDE-----------------------VSEVTEKEN 76 (112)
T ss_dssp HCSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHCT--TS-EEEEEETTT-----------------------THHHHHHTT
T ss_pred cCCeEEEEEE-CCCCHHHHHH-HHHHHHHHHHcC--CC-EEEEEECCC-----------------------CHHHHHHcC
Confidence 4677888887 8999999997 999999998875 57 888888753 236888999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+. ++|+ ++++++|+++..+.+. . .+++.++|++
T Consensus 77 v~--------~~Pt---~~~~~~G~~~~~~~G~-~---~~~l~~~l~~ 109 (112)
T 1syr_A 77 IT--------SMPT---FKVYKNGSSVDTLLGA-N---DSALKQLIEK 109 (112)
T ss_dssp CC--------SSSE---EEEEETTEEEEEEESC-C---HHHHHHHHHT
T ss_pred CC--------cccE---EEEEECCcEEEEEeCC-C---HHHHHHHHHH
Confidence 87 5663 5555699998887755 3 3667777665
No 149
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.15 E-value=1.4e-11 Score=85.01 Aligned_cols=74 Identities=18% Similarity=0.158 Sum_probs=57.2
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
+++++||.|| ++||++|+.. .|.+.++++++++. + .++.|..| .+..+++.|+
T Consensus 22 ~~k~vlv~F~-a~WC~~C~~~-~p~l~~l~~~~~~~-~-~~~~vd~d-----------------------~~~~l~~~~~ 74 (149)
T 3gix_A 22 AEKVLVLRFG-RDEDPVCLQL-DDILSKTSSDLSKM-A-AIYLVDVD-----------------------QTAVYTQYFD 74 (149)
T ss_dssp CSSEEEEEEE-CTTSHHHHHH-HHHHHHHHTTTTTT-E-EEEEEETT-----------------------TCCHHHHHTT
T ss_pred CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHccCc-e-EEEEEECC-----------------------cCHHHHHHcC
Confidence 4788888888 9999999998 99999999887643 5 67777653 3467899999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEee
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVE 145 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~ 145 (162)
+. ++|+ ++++.+|+++....+
T Consensus 75 v~--------~~Pt---~~~~~~G~~v~~~~g 95 (149)
T 3gix_A 75 IS--------YIPS---TVFFFNGQHMKVDYG 95 (149)
T ss_dssp CC--------SSSE---EEEEETTEEEEEECS
T ss_pred CC--------ccCe---EEEEECCeEEEeecC
Confidence 97 5663 665559999955554
No 150
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.14 E-value=7.1e-11 Score=81.87 Aligned_cols=86 Identities=13% Similarity=0.143 Sum_probs=66.4
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
.++++||.|| ++|||.|+.. .|.+.+++++++++ + .++.|+.+. +..++++|+
T Consensus 63 ~~~~vlv~F~-a~wC~~C~~~-~p~l~~la~~~~~~-v-~~~~vd~~~-----------------------~~~l~~~~~ 115 (155)
T 2ppt_A 63 DDLPLLVDFW-APWCGPCRQM-APQFQAAAATLAGQ-V-RLAKIDTQA-----------------------HPAVAGRHR 115 (155)
T ss_dssp CSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTTT-C-EEEEEETTT-----------------------STHHHHHTT
T ss_pred CCCcEEEEEE-CCCCHHHHHH-HHHHHHHHHHccCC-E-EEEEEeCCc-----------------------cHHHHHHcC
Confidence 5778888888 8999999997 99999999998753 7 888888752 346889999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
+. ++|+ ++++++|+++..+.+... .+++.+.|+
T Consensus 116 i~--------~~Pt---~~~~~~G~~~~~~~G~~~---~~~l~~~l~ 148 (155)
T 2ppt_A 116 IQ--------GIPA---FILFHKGRELARAAGARP---ASELVGFVR 148 (155)
T ss_dssp CC--------SSSE---EEEEETTEEEEEEESCCC---HHHHHHHHH
T ss_pred CC--------cCCE---EEEEeCCeEEEEecCCCC---HHHHHHHHH
Confidence 87 5664 666789999988876433 255555554
No 151
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.14 E-value=3.4e-11 Score=81.41 Aligned_cols=85 Identities=18% Similarity=0.219 Sum_probs=62.6
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|+.. .+.+.++++++++ ++ .++.|..+. +..+++.|+
T Consensus 37 ~~k~~lv~f~-a~wC~~C~~~-~~~l~~l~~~~~~-~v-~~~~vd~~~-----------------------~~~l~~~~~ 89 (136)
T 2l5l_A 37 GDKPAIVDFY-ADWCGPCKMV-APILDELAKEYDG-QI-VIYKVDTEK-----------------------EQELAGAFG 89 (136)
T ss_dssp CSSCEEEEEE-CTTSHHHHHH-HHHHHHHHHHTTT-TC-EEEEEETTT-----------------------CHHHHHHTT
T ss_pred CCCEEEEEEE-CCcCHHHHHH-HHHHHHHHHHhcC-CE-EEEEEeCCC-----------------------CHHHHHHcC
Confidence 3577888888 8999999997 9999999988864 47 788887652 346888999
Q ss_pred CccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHHHh
Q 038822 114 LELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
+. ++|+ +++++ +|+++ .+.+... .++++++|+
T Consensus 90 v~--------~~Pt---~~~~~~~G~~~-~~~G~~~---~~~l~~~l~ 122 (136)
T 2l5l_A 90 IR--------SIPS---ILFIPMEGKPE-MAQGAMP---KASFKKAID 122 (136)
T ss_dssp CC--------SSCE---EEEECSSSCCE-EEESCCC---HHHHHHHHH
T ss_pred CC--------CCCE---EEEECCCCcEE-EEeCCCC---HHHHHHHHH
Confidence 87 5664 88887 99987 4443322 355555554
No 152
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.14 E-value=8.3e-11 Score=75.65 Aligned_cols=87 Identities=13% Similarity=0.139 Sum_probs=65.8
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|... .+.+.++.+++++ ++ .++.|+.+. +..+++.|+
T Consensus 17 ~~~~~lv~f~-~~~C~~C~~~-~~~l~~~~~~~~~-~~-~~~~v~~~~-----------------------~~~~~~~~~ 69 (109)
T 2yzu_A 17 QHPLVLVDFW-AEWCAPCRMI-APILEEIAKEYEG-KL-LVAKLDVDE-----------------------NPKTAMRYR 69 (109)
T ss_dssp HCSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHTBT-TB-EEEEEETTT-----------------------CHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCHHHHHh-hHHHHHHHHHhhC-ce-EEEEEECCC-----------------------CHhHHHhCC
Confidence 4678888888 8999999997 9999999988864 47 788888653 346888999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+. ++|+ ++++.+|+++..+.+... .+++.+.|++
T Consensus 70 v~--------~~Pt---~~~~~~g~~~~~~~g~~~---~~~l~~~l~~ 103 (109)
T 2yzu_A 70 VM--------SIPT---VILFKDGQPVEVLVGAQP---KRNYQAKIEK 103 (109)
T ss_dssp CC--------SSSE---EEEEETTEEEEEEESCCC---HHHHHHHHHT
T ss_pred CC--------cCCE---EEEEeCCcEeeeEeCCCC---HHHHHHHHHH
Confidence 87 5664 677789999988776543 2556666554
No 153
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.13 E-value=9.8e-11 Score=77.02 Aligned_cols=87 Identities=15% Similarity=0.182 Sum_probs=65.1
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
.+++++|.|| ++|||.|... .+.+.++.+++++ ++ .++.|+.+. +..+++.|+
T Consensus 29 ~~~~~lv~f~-~~~C~~C~~~-~~~~~~~~~~~~~-~~-~~~~v~~~~-----------------------~~~~~~~~~ 81 (121)
T 2i1u_A 29 SNKPVLVDFW-ATWCGPCKMV-APVLEEIATERAT-DL-TVAKLDVDT-----------------------NPETARNFQ 81 (121)
T ss_dssp CSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTT-TC-EEEEEETTT-----------------------CHHHHHHTT
T ss_pred CCCcEEEEEE-CCCCHHHHHH-HHHHHHHHHHhcC-Ce-EEEEEECCC-----------------------CHHHHHhcC
Confidence 4677888888 8999999997 9999999988864 47 888888753 346888999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+. ++|+ ++++++|+++..+.+.... +++.+.|++
T Consensus 82 i~--------~~Pt---~~~~~~g~~~~~~~G~~~~---~~l~~~l~~ 115 (121)
T 2i1u_A 82 VV--------SIPT---LILFKDGQPVKRIVGAKGK---AALLRELSD 115 (121)
T ss_dssp CC--------SSSE---EEEEETTEEEEEEESCCCH---HHHHHHTCS
T ss_pred CC--------cCCE---EEEEECCEEEEEecCCCCH---HHHHHHHHH
Confidence 87 5663 6666799998888765432 455555543
No 154
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.13 E-value=9.2e-11 Score=78.44 Aligned_cols=85 Identities=7% Similarity=0.054 Sum_probs=64.3
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
+++++||.|| ++||+.|... .|.+.+++++++ ++ .++.|..+. +..+++.|+
T Consensus 36 ~~k~vvv~F~-a~wC~~C~~~-~p~l~~l~~~~~--~v-~~~~vd~d~-----------------------~~~l~~~~~ 87 (125)
T 1r26_A 36 EDILTVAWFT-AVWCGPCKTI-ERPMEKIAYEFP--TV-KFAKVDADN-----------------------NSEIVSKCR 87 (125)
T ss_dssp SSSCEEEEEE-CTTCHHHHHT-HHHHHHHHHHCT--TS-EEEEEETTT-----------------------CHHHHHHTT
T ss_pred cCCEEEEEEE-CCcCHhHHHH-HHHHHHHHHHCC--CC-EEEEEECCC-----------------------CHHHHHHcC
Confidence 5788888888 8999999998 999999998873 57 888888752 356889999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+. ++|+ ++++.+|+++..+.+. . .+++.+.|++
T Consensus 88 v~--------~~Pt---~~i~~~G~~~~~~~G~-~---~~~l~~~l~~ 120 (125)
T 1r26_A 88 VL--------QLPT---FIIARSGKMLGHVIGA-N---PGMLRQKLRD 120 (125)
T ss_dssp CC--------SSSE---EEEEETTEEEEEEESS-C---HHHHHHHHHH
T ss_pred CC--------cccE---EEEEeCCeEEEEEeCC-C---HHHHHHHHHH
Confidence 87 5663 5555699999887762 2 2455555543
No 155
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.12 E-value=2.1e-11 Score=82.52 Aligned_cols=93 Identities=17% Similarity=0.189 Sum_probs=65.9
Q ss_pred cCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHc
Q 038822 33 AAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHAL 112 (162)
Q Consensus 33 ~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~ 112 (162)
+++ +++|.|| ++|||.|+.. .|.+.+++++++ + .++.|+.++..... ..|.+..+++.|
T Consensus 30 ~~~-~vlv~F~-a~wC~~C~~~-~p~l~~l~~~~~---v-~~~~vd~~~~~~~~--------------~~d~~~~l~~~~ 88 (135)
T 3emx_A 30 LQG-DAILAVY-SKTCPHCHRD-WPQLIQASKEVD---V-PIVMFIWGSLIGER--------------ELSAARLEMNKA 88 (135)
T ss_dssp HTS-SEEEEEE-ETTCHHHHHH-HHHHHHHHTTCC---S-CEEEEEECTTCCHH--------------HHHHHHHHHHHH
T ss_pred hCC-cEEEEEE-CCcCHhhhHh-ChhHHHHHHHCC---C-EEEEEECCCchhhh--------------hhhhhHHHHHHc
Confidence 355 7888887 8999999998 999999987764 7 88889885432211 112346788999
Q ss_pred CCccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 113 GLELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 113 gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
++. ++|+ ++++++|+++..+.|.... +..+++++
T Consensus 89 ~v~--------~~Pt---~~~~~~G~~v~~~~G~~~~---~~~~~~i~ 122 (135)
T 3emx_A 89 GVE--------GTPT---LVFYKEGRIVDKLVGATPW---SLKVEKAR 122 (135)
T ss_dssp TCC--------SSSE---EEEEETTEEEEEEESCCCH---HHHHHHHH
T ss_pred CCc--------eeCe---EEEEcCCEEEEEEeCCCCH---HHHHHHHH
Confidence 997 5663 6666699999998876443 44445444
No 156
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.12 E-value=5.4e-11 Score=77.29 Aligned_cols=85 Identities=16% Similarity=0.296 Sum_probs=63.4
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|... .+.+.++.++++ ++ .++.|+.+. +..+++.|+
T Consensus 25 ~~~~~vv~f~-~~~C~~C~~~-~~~l~~~~~~~~--~v-~~~~v~~~~-----------------------~~~~~~~~~ 76 (113)
T 1ti3_A 25 SQKLIVVDFT-ASWCPPCKMI-APIFAELAKKFP--NV-TFLKVDVDE-----------------------LKAVAEEWN 76 (113)
T ss_dssp SSSEEEEEEE-CSSCHHHHHH-HHHHHHHHHHCS--SE-EEEEEETTT-----------------------CHHHHHHHH
T ss_pred cCCeEEEEEE-CCCCHHHHHH-HHHHHHHHHhCC--Cc-EEEEEEccc-----------------------cHHHHHhCC
Confidence 4787888887 8999999997 999999988875 57 788887742 356888899
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+. ++|+ ++++++|+++..+.+. . .+++.+.|++
T Consensus 77 v~--------~~Pt---~~~~~~G~~~~~~~g~-~---~~~l~~~l~~ 109 (113)
T 1ti3_A 77 VE--------AMPT---FIFLKDGKLVDKTVGA-D---KDGLPTLVAK 109 (113)
T ss_dssp CS--------STTE---EEEEETTEEEEEEECC-C---TTHHHHHHHH
T ss_pred CC--------cccE---EEEEeCCEEEEEEecC-C---HHHHHHHHHH
Confidence 87 5663 6666799999888763 2 2556666553
No 157
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.12 E-value=8.7e-11 Score=78.12 Aligned_cols=89 Identities=12% Similarity=0.115 Sum_probs=63.2
Q ss_pred hhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHH
Q 038822 31 SLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTH 110 (162)
Q Consensus 31 ~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 110 (162)
+.+++ +++|.|| ++|||.|+.. .|.+.++++++++.++ .++.|..+. +..+++
T Consensus 19 ~~~~~-~vlv~f~-a~wC~~C~~~-~p~~~~~~~~~~~~~v-~~~~vd~~~-----------------------~~~~~~ 71 (126)
T 1x5e_A 19 ELLEG-DWMIEFY-APWCPACQNL-QPEWESFAEWGEDLEV-NIAKVDVTE-----------------------QPGLSG 71 (126)
T ss_dssp HHTSS-EEEEEEE-CSSCHHHHHH-HHHHHHHHHHHGGGTC-EEEEEETTT-----------------------CHHHHH
T ss_pred HHhCC-CEEEEEE-CCCCHHHHHH-hHHHHHHHHHhccCCe-EEEEEECcC-----------------------CHHHHH
Confidence 44444 4777777 8999999998 9999999999887678 888887652 345889
Q ss_pred HcCCccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 111 ALGLELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 111 ~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
.|++. ++|+ ++++.+|++ ..+.+.. +.+++.+.|+.
T Consensus 72 ~~~v~--------~~Pt---~~~~~~G~~-~~~~G~~---~~~~l~~~l~~ 107 (126)
T 1x5e_A 72 RFIIN--------ALPT---IYHCKDGEF-RRYQGPR---TKKDFINFISD 107 (126)
T ss_dssp HTTCC--------SSSE---EEEEETTEE-EECCSCC---CHHHHHHHHHT
T ss_pred HcCCc--------ccCE---EEEEeCCeE-EEeecCC---CHHHHHHHHHH
Confidence 99987 5664 777789995 4443322 23455555543
No 158
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.12 E-value=8.8e-11 Score=76.02 Aligned_cols=86 Identities=14% Similarity=0.210 Sum_probs=64.8
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|+.. .+.+.++.+++++ .+ .++.|..+. +..+++.|+
T Consensus 21 ~~~~vlv~f~-a~~C~~C~~~-~~~~~~~~~~~~~-~v-~~~~vd~~~-----------------------~~~l~~~~~ 73 (111)
T 3gnj_A 21 EGKACLVMFS-RKNCHVCQKV-TPVLEELRLNYEE-SF-GFYYVDVEE-----------------------EKTLFQRFS 73 (111)
T ss_dssp SCCCEEEEEE-CSSCHHHHHH-HHHHHHHHHHTTT-TS-EEEEEETTT-----------------------CHHHHHHTT
T ss_pred cCCEEEEEEe-CCCChhHHHH-HHHHHHHHHHcCC-ce-EEEEEECCc-----------------------ChhHHHhcC
Confidence 5677888888 8999999997 9999999998864 47 788887742 347889999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
+. ++|+ ++++++|+++..+.+.... +++.+.|+
T Consensus 74 v~--------~~Pt---~~~~~~g~~~~~~~g~~~~---~~l~~~l~ 106 (111)
T 3gnj_A 74 LK--------GVPQ---ILYFKDGEYKGKMAGDVED---DEVEQMIA 106 (111)
T ss_dssp CC--------SSCE---EEEEETTEEEEEEESSCCH---HHHHHHHH
T ss_pred CC--------cCCE---EEEEECCEEEEEEeccCCH---HHHHHHHH
Confidence 87 5664 7777899998887765332 45555554
No 159
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.11 E-value=7.1e-11 Score=79.83 Aligned_cols=86 Identities=12% Similarity=0.152 Sum_probs=59.9
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCC--CCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHH
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKG--VDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHA 111 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~--~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 111 (162)
++++++|.|| ++||+.|+.. .+.+.++++++++.+ + .++.|..+ .+..+++.
T Consensus 33 ~~~~vlv~f~-a~wC~~C~~~-~p~~~~~~~~~~~~~~~v-~~~~vd~~-----------------------~~~~~~~~ 86 (140)
T 2dj1_A 33 DKDTVLLEFY-APWCGHCKQF-APEYEKIASTLKDNDPPI-AVAKIDAT-----------------------SASMLASK 86 (140)
T ss_dssp TCSEEEEEEC-CTTCHHHHTT-HHHHHHHHHHHHSSSSCC-EEEEECTT-----------------------TCHHHHHH
T ss_pred cCCeEEEEEE-CCCCHHHHHh-hHHHHHHHHHHhccCCce-EEEEEeCc-----------------------ccHHHHHH
Confidence 4677777777 8999999998 999999999998764 5 55555433 23678899
Q ss_pred cCCccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 112 LGLELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 112 ~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
|++. ++|+ ++++++|+ +..+.+.. +.+++.+.|+
T Consensus 87 ~~v~--------~~Pt---~~~~~~G~-~~~~~g~~---~~~~l~~~l~ 120 (140)
T 2dj1_A 87 FDVS--------GYPT---IKILKKGQ-AVDYDGSR---TQEEIVAKVR 120 (140)
T ss_dssp TTCC--------SSSE---EEEEETTE-EEECCSCC---CHHHHHHHHH
T ss_pred CCCC--------ccCe---EEEEECCc-EEEcCCCC---CHHHHHHHHH
Confidence 9987 5664 77778998 44444322 2345555544
No 160
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.11 E-value=6.2e-11 Score=78.31 Aligned_cols=95 Identities=14% Similarity=0.131 Sum_probs=69.8
Q ss_pred CceeEehhh-hc-CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEE
Q 038822 23 QLQQVSVHS-LA-AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKF 100 (162)
Q Consensus 23 ~g~~~~l~~-~~-~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~ 100 (162)
+|+..++.+ +. .+++++|.|| ++|||.|+.. .+.+.++++++ .++ .++.|..+.
T Consensus 9 ~g~~~~~~~~~~~~~~~vlv~f~-a~wC~~C~~~-~~~l~~l~~~~--~~v-~~~~vd~~~------------------- 64 (118)
T 2f51_A 9 NGTHEALLNRIKEAPGLVLVDFF-ATWCGPCQRL-GQILPSIAEAN--KDV-TFIKVDVDK------------------- 64 (118)
T ss_dssp CSCHHHHHHHHHHCSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHC--TTS-EEEEEETTT-------------------
T ss_pred cCCHHHHHHHHHhCCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHC--CCe-EEEEEECCC-------------------
Confidence 455555552 21 4778888887 8999999997 99999999887 567 888888753
Q ss_pred EEcCCchHHHHcCCccccccCCCCccceeEEEEEcC----CeEEEEEeecCCcceeCCHHHHHh
Q 038822 101 LADGSAKYTHALGLELDLSEKGLGTQSRRFALLVDD----LKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 101 l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~~----g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
+..+++.|++. ++|+ ++++++ |+++..+.|... ++++++++
T Consensus 65 ----~~~~~~~~~i~--------~~Pt---~~~~~~~~~~G~~~~~~~G~~~----~~l~~~~~ 109 (118)
T 2f51_A 65 ----NGNAADAYGVS--------SIPA---LFFVKKEGNEIKTLDQFVGADV----SRIKADIE 109 (118)
T ss_dssp ----CHHHHHHTTCC--------SSSE---EEEEEEETTEEEEEEEEESCCH----HHHHHHHH
T ss_pred ----CHHHHHhcCCC--------CCCE---EEEEeCCCCcceEEEeecCCCH----HHHHHHHH
Confidence 24688999987 5664 777776 999998886543 34666554
No 161
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.11 E-value=2.7e-11 Score=81.86 Aligned_cols=88 Identities=8% Similarity=0.075 Sum_probs=62.0
Q ss_pred ehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCch
Q 038822 28 SVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAK 107 (162)
Q Consensus 28 ~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~ 107 (162)
.+++. +|+++||.|| ++|||.|... .|.+.++.+++ ++ .++.|..+. +..
T Consensus 34 ~l~~~-~~k~vvv~F~-a~wC~~C~~~-~p~l~~l~~~~---~v-~~~~vd~~~-----------------------~~~ 83 (133)
T 3cxg_A 34 VFSST-QNSSIVIKFG-AVWCKPCNKI-KEYFKNQLNYY---YV-TLVDIDVDI-----------------------HPK 83 (133)
T ss_dssp HHTC--CCSEEEEEEE-CTTCHHHHHT-HHHHHGGGGTE---EC-EEEEEETTT-----------------------CHH
T ss_pred HHHhc-CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHhc---CE-EEEEEeccc-----------------------hHH
Confidence 34554 6788888888 8999999998 99998887654 46 677776542 456
Q ss_pred HHHHcCCccccccCCCCccceeEEEEE-c-CCe--EEEEEeecCCcceeCCHHHHHh
Q 038822 108 YTHALGLELDLSEKGLGTQSRRFALLV-D-DLK--VKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 108 ~~~~~gv~~~~~~~~~~~~~~~~~~ii-~-~g~--i~~~~~~~~~~~~~~~~~~il~ 160 (162)
+++.|++. ++|+ ++++ + +|+ ++..+.+. . .+++.+.|+
T Consensus 84 l~~~~~v~--------~~Pt---~~~~~~~~g~g~~~~~~~G~-~---~~~l~~~l~ 125 (133)
T 3cxg_A 84 LNDQHNIK--------ALPT---FEFYFNLNNEWVLVHTVEGA-N---QNDIEKAFQ 125 (133)
T ss_dssp HHHHTTCC--------SSSE---EEEEEEETTEEEEEEEEESC-C---HHHHHHHHH
T ss_pred HHHhcCCC--------CCCE---EEEEEecCCCeEEEEEEcCC-C---HHHHHHHHH
Confidence 88999987 5664 6666 3 777 88777654 2 245555554
No 162
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.11 E-value=1e-10 Score=76.16 Aligned_cols=90 Identities=14% Similarity=0.152 Sum_probs=64.8
Q ss_pred hhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHH
Q 038822 30 HSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYT 109 (162)
Q Consensus 30 ~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 109 (162)
..+.++++++|.|| ++|||.|... .+.+.++.+++. ++ .++.|..+. +..++
T Consensus 14 ~~~~~~~~~vv~f~-a~wC~~C~~~-~~~l~~~~~~~~--~v-~~~~vd~~~-----------------------~~~l~ 65 (110)
T 2l6c_A 14 AHFEGLSDAIVFFH-KNLCPHCKNM-EKVLDKFGARAP--QV-AISSVDSEA-----------------------RPELM 65 (110)
T ss_dssp HHHTTCSEEEEEEE-CSSCSTHHHH-HHHHHHHHTTCT--TS-CEEEEEGGG-----------------------CHHHH
T ss_pred HHHHcCCCEEEEEE-CCCCHhHHHH-HHHHHHHHHHCC--Cc-EEEEEcCcC-----------------------CHHHH
Confidence 34335677777777 8999999997 999988887764 56 677776642 35688
Q ss_pred HHcCCccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 110 HALGLELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 110 ~~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+.|++. ++|+ ++++.+|+++..+.|.... +++++.+++
T Consensus 66 ~~~~v~--------~~Pt---~~~~~~G~~v~~~~G~~~~---~~l~~~~~~ 103 (110)
T 2l6c_A 66 KELGFE--------RVPT---LVFIRDGKVAKVFSGIMNP---RELQALYAS 103 (110)
T ss_dssp HHTTCC--------SSCE---EEEEESSSEEEEEESCCCH---HHHHHHHHT
T ss_pred HHcCCc--------ccCE---EEEEECCEEEEEEcCCCCH---HHHHHHHHH
Confidence 999987 5664 6777899999888765332 556665543
No 163
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.10 E-value=1.1e-10 Score=75.46 Aligned_cols=85 Identities=8% Similarity=0.065 Sum_probs=63.6
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|+.. .|.+.++++++ .++ .++.|..+. +..+++.|+
T Consensus 20 ~~~~v~v~f~-a~wC~~C~~~-~~~~~~~~~~~--~~~-~~~~vd~~~-----------------------~~~~~~~~~ 71 (107)
T 1gh2_A 20 GSRLAVVKFT-MRGCGPCLRI-APAFSSMSNKY--PQA-VFLEVDVHQ-----------------------CQGTAATNN 71 (107)
T ss_dssp TTSCEEEEEE-CSSCHHHHHH-HHHHHHHHHHC--TTS-EEEEEETTT-----------------------SHHHHHHTT
T ss_pred CCCEEEEEEE-CCCChhhHHH-HHHHHHHHHHC--CCc-EEEEEECcc-----------------------CHHHHHhcC
Confidence 5788888888 8999999997 99999999887 357 788887753 245888999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+. ++|+ ++++.+|+++..+.+... +++++.|++
T Consensus 72 v~--------~~Pt---~~~~~~G~~~~~~~G~~~----~~l~~~l~~ 104 (107)
T 1gh2_A 72 IS--------ATPT---FQFFRNKVRIDQYQGADA----VGLEEKIKQ 104 (107)
T ss_dssp CC--------SSSE---EEEEETTEEEEEEESSCH----HHHHHHHHH
T ss_pred CC--------cccE---EEEEECCeEEEEEeCCCH----HHHHHHHHH
Confidence 87 5664 666679999987776322 236665543
No 164
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.10 E-value=5.3e-11 Score=87.09 Aligned_cols=86 Identities=20% Similarity=0.312 Sum_probs=65.0
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++||+.|+.. .|.+.++++++++. + .++.|+.+. +..+++.|+
T Consensus 29 ~~k~vvv~F~-a~wC~~C~~~-~p~l~~l~~~~~~~-v-~~~~vd~d~-----------------------~~~l~~~~~ 81 (222)
T 3dxb_A 29 ADGAILVDFW-AEWCGPCKMI-APILDEIADEYQGK-L-TVAKLNIDQ-----------------------NPGTAPKYG 81 (222)
T ss_dssp CSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTTT-C-EEEEEETTT-----------------------CTTTGGGGT
T ss_pred cCCEEEEEEE-CCcCHHHHHH-HHHHHHHHHHhcCC-c-EEEEEECCC-----------------------CHHHHHHcC
Confidence 5778888888 8999999998 99999999998754 7 888888753 345678899
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
+. ++|+ ++++++|+++..+.+.... +++.+.|+
T Consensus 82 v~--------~~Pt---~~~~~~G~~~~~~~G~~~~---~~l~~~l~ 114 (222)
T 3dxb_A 82 IR--------GIPT---LLLFKNGEVAATKVGALSK---GQLKEFLD 114 (222)
T ss_dssp CC--------SBSE---EEEEETTEEEEEEESCCCH---HHHHHHHH
T ss_pred CC--------cCCE---EEEEECCeEEEEeccccCh---HHHHHHHH
Confidence 87 5664 7777799999888765332 45555444
No 165
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.09 E-value=1.1e-10 Score=76.46 Aligned_cols=84 Identities=20% Similarity=0.264 Sum_probs=62.7
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|... .+.+.++.++++ ++ .++.|..+ .+..+++.|+
T Consensus 27 ~~~~~vv~f~-~~~C~~C~~~-~~~l~~~~~~~~--~~-~~~~v~~~-----------------------~~~~~~~~~~ 78 (118)
T 2vm1_A 27 TGKLVIIDFT-ASWCGPCRVI-APVFAEYAKKFP--GA-IFLKVDVD-----------------------ELKDVAEAYN 78 (118)
T ss_dssp HTCCEEEEEE-CTTCHHHHHH-HHHHHHHHHHCT--TS-EEEEEETT-----------------------TSHHHHHHTT
T ss_pred CCCEEEEEEE-CCCCHhHHHH-hHHHHHHHHHCC--Cc-EEEEEEcc-----------------------cCHHHHHHcC
Confidence 3788888888 8999999997 999999998875 67 78888774 2356888999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
+. ++|+ ++++++|+++..+.+. . .+++.+.|+
T Consensus 79 v~--------~~Pt---~~~~~~g~~~~~~~g~-~---~~~l~~~l~ 110 (118)
T 2vm1_A 79 VE--------AMPT---FLFIKDGEKVDSVVGG-R---KDDIHTKIV 110 (118)
T ss_dssp CC--------SBSE---EEEEETTEEEEEEESC-C---HHHHHHHHH
T ss_pred CC--------cCcE---EEEEeCCeEEEEecCC-C---HHHHHHHHH
Confidence 87 5663 6666799999877753 2 244555443
No 166
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.09 E-value=1e-10 Score=80.67 Aligned_cols=74 Identities=12% Similarity=0.149 Sum_probs=59.7
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
+++++||.|| ++|||.|+.. .|.+.++.+++ .++ .++.|..+. +..+++.|+
T Consensus 31 ~~~~vvv~F~-a~wC~~C~~~-~p~l~~l~~~~--~~v-~~~~vd~~~-----------------------~~~l~~~~~ 82 (153)
T 2wz9_A 31 AKSLLVVHFW-APWAPQCAQM-NEVMAELAKEL--PQV-SFVKLEAEG-----------------------VPEVSEKYE 82 (153)
T ss_dssp TTSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHC--TTS-EEEEEETTT-----------------------SHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCHhHHHH-HHHHHHHHHHc--CCe-EEEEEECCC-----------------------CHHHHHHcC
Confidence 4788888888 8999999997 99999999886 367 888888753 346889999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeec
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVES 146 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~ 146 (162)
+. ++|+ ++++++|+++..+.+.
T Consensus 83 v~--------~~Pt---~~~~~~G~~~~~~~G~ 104 (153)
T 2wz9_A 83 IS--------SVPT---FLFFKNSQKIDRLDGA 104 (153)
T ss_dssp CC--------SSSE---EEEEETTEEEEEEESS
T ss_pred CC--------CCCE---EEEEECCEEEEEEeCC
Confidence 87 5664 7788899999887753
No 167
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.09 E-value=1.2e-10 Score=79.16 Aligned_cols=86 Identities=19% Similarity=0.138 Sum_probs=64.3
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
.+++++|.|| ++||+.|+.. .+.+.++.++++++ + .++.|..+ .+..+++.|+
T Consensus 23 ~~~~vlv~F~-a~wC~~C~~~-~~~l~~l~~~~~~~-v-~~~~vd~~-----------------------~~~~l~~~~~ 75 (140)
T 3hz4_A 23 SKKPVVVMFY-SPACPYCKAM-EPYFEEYAKEYGSS-A-VFGRINIA-----------------------TNPWTAEKYG 75 (140)
T ss_dssp CSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTTT-S-EEEEEETT-----------------------TCHHHHHHHT
T ss_pred CCCcEEEEEE-CCCChhHHHH-HHHHHHHHHHhCCc-e-EEEEEECC-----------------------cCHhHHHHCC
Confidence 4778888888 8999999997 99999999998753 7 78888764 2356888999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
+. ++|+ ++++.+|+++..+.+.... +++.+.|+
T Consensus 76 v~--------~~Pt---~~~~~~G~~~~~~~G~~~~---~~l~~~l~ 108 (140)
T 3hz4_A 76 VQ--------GTPT---FKFFCHGRPVWEQVGQIYP---SILKNAVR 108 (140)
T ss_dssp CC--------EESE---EEEEETTEEEEEEESSCCH---HHHHHHHH
T ss_pred CC--------cCCE---EEEEeCCcEEEEEcCCCCH---HHHHHHHH
Confidence 87 5663 6666799999888765332 44444443
No 168
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.08 E-value=3e-10 Score=76.73 Aligned_cols=82 Identities=9% Similarity=0.038 Sum_probs=58.2
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++||+.|+.. .|.+.++++++++.++ .++.|..+. +..+++.|+
T Consensus 25 ~~~~vlv~f~-a~wC~~C~~~-~p~~~~l~~~~~~~~v-~~~~vd~~~-----------------------~~~~~~~~~ 78 (137)
T 2dj0_A 25 KRVTWIVEFF-ANWSNDCQSF-APIYADLSLKYNCTGL-NFGKVDVGR-----------------------YTDVSTRYK 78 (137)
T ss_dssp TTSCEEEEEC-CTTCSTTTTT-HHHHHHHHHHHCSSSC-EEEECCTTT-----------------------CHHHHHHTT
T ss_pred CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHhCCCCe-EEEEEeCcc-----------------------CHHHHHHcc
Confidence 4567888888 8999999998 9999999999976567 777776643 233556666
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeec
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVES 146 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~ 146 (162)
+.... ...++| +++++++|+++..+.+.
T Consensus 79 v~~~~--~~~~~P---t~~~~~~G~~~~~~~G~ 106 (137)
T 2dj0_A 79 VSTSP--LTKQLP---TLILFQGGKEAMRRPQI 106 (137)
T ss_dssp CCCCS--SSSCSS---EEEEESSSSEEEEESCB
T ss_pred CcccC--CcCCCC---EEEEEECCEEEEEecCc
Confidence 63110 001345 47777899999888765
No 169
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.66 E-value=1.2e-11 Score=82.78 Aligned_cols=97 Identities=12% Similarity=0.139 Sum_probs=67.0
Q ss_pred ceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHH---HHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEE
Q 038822 24 LQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGF---IEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKF 100 (162)
Q Consensus 24 g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l---~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~ 100 (162)
.+.+++... ++++++|.|| ++|||.|+.. .+.+ .++.+.+++ ++ .++.|..++.
T Consensus 9 ~~~~~~~~~-~~k~vlv~f~-a~wC~~C~~~-~~~~~~~~~~~~~~~~-~~-~~~~vd~~~~------------------ 65 (130)
T 2lst_A 9 PEALALAQA-HGRMVMVYFH-SEHCPYCQQM-NTFVLSDPGVSRLLEA-RF-VVASVSVDTP------------------ 65 (130)
Confidence 667788775 7888888888 8999999997 8888 777776654 35 5666665431
Q ss_pred EEcCCchHHHHcCCccccccCCCCccceeEEEEEc--CCeE--EEEEeecCCcceeCCHHHHHh
Q 038822 101 LADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD--DLKV--KAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 101 l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~--~g~i--~~~~~~~~~~~~~~~~~~il~ 160 (162)
.+..+++.|++. ++|+ ++++| +|++ +....+.... +++.+.|+
T Consensus 66 ---~~~~~~~~~~v~--------~~Pt---~~~~d~~~G~~~~~~~~~G~~~~---~~l~~~l~ 112 (130)
T 2lst_A 66 ---EGQELARRYRVP--------GTPT---FVFLVPKAGAWEEVGRLFGSRPR---AEFLKELR 112 (130)
Confidence 235677888886 5554 77775 6998 7777654332 44544444
No 170
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.08 E-value=1.5e-10 Score=76.12 Aligned_cols=90 Identities=12% Similarity=0.153 Sum_probs=61.6
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
.+++++|+|| ++|||+|+.. .|.+.++++++. . .+..+..+..... |....+++.||
T Consensus 28 ~~~~~~v~f~-a~wC~~C~~~-~p~l~~~~~~~~---~-~v~~~~~~~~~~~-----------------~~~~~~~~~~~ 84 (118)
T 1zma_A 28 KKETATFFIG-RKTCPYCRKF-AGTLSGVVAETK---A-HIYFINSEEPSQL-----------------NDLQAFRSRYG 84 (118)
T ss_dssp TTCCEEEEEE-CTTCHHHHHH-HHHHHHHHHHHC---C-CCEEEETTCGGGH-----------------HHHHHHHHHHT
T ss_pred CCCeEEEEEE-CCCCccHHHH-HHHHHHHHHhcC---C-eEEEEECCCcCcH-----------------HHHHHHHHHcC
Confidence 4677888888 8999999997 999999988763 4 5666666542211 11245788899
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
+. ++|+ ++++++|+++..+.|... .+++.+.|+
T Consensus 85 i~--------~~Pt---~~~~~~G~~~~~~~G~~~---~~~l~~~l~ 117 (118)
T 1zma_A 85 IP--------TVPG---FVHITDGQINVRCDSSMS---AQEIKDFAG 117 (118)
T ss_dssp CC--------SSCE---EEEEETTEEEEECCTTCC---HHHHHHHHT
T ss_pred CC--------CCCe---EEEEECCEEEEEecCCCC---HHHHHHHhh
Confidence 87 5664 777789999877664433 245555554
No 171
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.07 E-value=3.3e-10 Score=75.52 Aligned_cols=74 Identities=9% Similarity=0.139 Sum_probs=56.3
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
.+++++|.|| ++||+.|+.. .|.+.++++++++. + .++.|..+ .+..+++.|+
T Consensus 34 ~~~~~lv~f~-a~wC~~C~~~-~~~~~~~~~~~~~~-~-~~~~vd~~-----------------------~~~~l~~~~~ 86 (130)
T 2dml_A 34 SDGLWLVEFY-APWCGHCQRL-TPEWKKAATALKDV-V-KVGAVNAD-----------------------KHQSLGGQYG 86 (130)
T ss_dssp CSSCEEEEEE-CTTCSTTGGG-HHHHHHHHHHTTTT-S-EEEEEETT-----------------------TCHHHHHHHT
T ss_pred CCCeEEEEEE-CCCCHHHHhh-CHHHHHHHHHhcCc-e-EEEEEeCC-----------------------CCHHHHHHcC
Confidence 3677888887 8999999997 99999999988653 6 77777753 3467889999
Q ss_pred CccccccCCCCccceeEEEEEc-CCeEEEEEee
Q 038822 114 LELDLSEKGLGTQSRRFALLVD-DLKVKAANVE 145 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~ 145 (162)
+. ++|+ +++++ +|+++..+.+
T Consensus 87 v~--------~~Pt---~~~~~~~~~~~~~~~G 108 (130)
T 2dml_A 87 VQ--------GFPT---IKIFGANKNKPEDYQG 108 (130)
T ss_dssp CC--------SSSE---EEEESSCTTSCEECCS
T ss_pred CC--------ccCE---EEEEeCCCCeEEEeec
Confidence 87 5664 88888 6664555554
No 172
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.64 E-value=1.6e-11 Score=78.65 Aligned_cols=87 Identities=16% Similarity=0.236 Sum_probs=62.0
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|... .+.+.++.+++++ ++ .++.|+.+. +..+++.|+
T Consensus 18 ~~~~~~v~f~-~~~C~~C~~~-~~~~~~~~~~~~~-~~-~~~~v~~~~-----------------------~~~~~~~~~ 70 (106)
T 2yj7_A 18 SDKPVLVDFW-APWCGPCRMI-APIIEELAKEYEG-KV-KVVKVNVDE-----------------------NPNTAAQYG 70 (106)
Confidence 4677878877 8999999997 9999999988864 46 666666532 345677888
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+. ++|+ ++++++|+++..+.+... .+++.+.|++
T Consensus 71 v~--------~~Pt---~~~~~~g~~~~~~~g~~~---~~~l~~~l~~ 104 (106)
T 2yj7_A 71 IR--------SIPT---LLLFKNGQVVDRLVGAQP---KEALKERIDK 104 (106)
Confidence 86 4553 666689999887776533 2556665554
No 173
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.05 E-value=4.7e-10 Score=74.68 Aligned_cols=87 Identities=18% Similarity=0.296 Sum_probs=60.9
Q ss_pred CCCeEEEEEeeCCCCC--------------CCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceE
Q 038822 34 AGKKVILFGVPGDFTP--------------TCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVK 99 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp--------------~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~ 99 (162)
++++++|.|| ++||| .|+.. .|.+.++++++++ ++ .++.|..+.
T Consensus 20 ~~k~vlv~F~-a~wC~~c~~l~~~~~~~~~~C~~~-~p~~~~l~~~~~~-~~-~~~~vd~d~------------------ 77 (123)
T 1oaz_A 20 ADGAILVDFW-AEWCGPIEESDDRRYDLVGPCKMI-APILDEIADEYQG-KL-TVAKLNIDQ------------------ 77 (123)
T ss_dssp CSSEEEEEEE-CSSCSCBSSSTTSCCSCCCCCCTT-HHHHTTC--------C-EEEEEETTS------------------
T ss_pred CCCeEEEEEE-CCCCccccccccccccCCCCcHHH-HHHHHHHHHHhcC-Ce-EEEEEECCC------------------
Confidence 5788888887 89999 99998 9999999988875 37 788887653
Q ss_pred EEEcCCchHHHHcCCccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 100 FLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 100 ~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+..+++.||+. ++|+ ++++.+|+++....|.... +++.+.|+.
T Consensus 78 -----~~~l~~~~~v~--------~~Pt---~~~~~~G~~~~~~~G~~~~---~~l~~~l~~ 120 (123)
T 1oaz_A 78 -----NPGTAPKYGIR--------GIPT---LLLFKNGEVAATKVGALSK---GQLKEFLDA 120 (123)
T ss_dssp -----CTTTGGGGTCC--------BSSE---EEEEESSSEEEEEESCCCH---HHHHHHHTT
T ss_pred -----CHHHHHHcCCC--------ccCE---EEEEECCEEEEEEeCCCCH---HHHHHHHHH
Confidence 24578899987 5664 6767899999887765332 566666654
No 174
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.05 E-value=1.4e-10 Score=75.86 Aligned_cols=88 Identities=13% Similarity=0.233 Sum_probs=60.5
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCC--CCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHH
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKG--VDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHA 111 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~--~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 111 (162)
++++++|.|| ++|||.|... .+.+.++.+++++.+ + .++.|..+ .+..+.++
T Consensus 23 ~~~~~lv~f~-~~~C~~C~~~-~~~~~~~~~~~~~~~~~v-~~~~vd~~-----------------------~~~~~~~~ 76 (120)
T 1mek_A 23 AHKYLLVEFY-APWCGHCKAL-APEYAKAAGKLKAEGSEI-RLAKVDAT-----------------------EESDLAQQ 76 (120)
T ss_dssp HCSEEEEEEE-CSSCSTTSTT-HHHHHHHHHTTTTTCCCC-BCEEEETT-----------------------TCCSSHHH
T ss_pred cCCeEEEEEE-CCCCHHHHHh-hHHHHHHHHHHhccCCcE-EEEEEcCC-----------------------CCHHHHHH
Confidence 4677777777 8999999997 999999999887543 4 45555543 13468899
Q ss_pred cCCccccccCCCCccceeEEEEEcCCeEE--EEEeecCCcceeCCHHHHHhc
Q 038822 112 LGLELDLSEKGLGTQSRRFALLVDDLKVK--AANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 112 ~gv~~~~~~~~~~~~~~~~~~ii~~g~i~--~~~~~~~~~~~~~~~~~il~~ 161 (162)
|++. ++|+ ++++++|+++ ..+.+.. +.+++.+.|+.
T Consensus 77 ~~v~--------~~Pt---~~~~~~g~~~~~~~~~g~~---~~~~l~~~l~~ 114 (120)
T 1mek_A 77 YGVR--------GYPT---IKFFRNGDTASPKEYTAGR---EADDIVNWLKK 114 (120)
T ss_dssp HTCC--------SSSE---EEEEESSCSSSCEECCCCS---SHHHHHHHHHT
T ss_pred CCCC--------cccE---EEEEeCCCcCCcccccCcc---CHHHHHHHHHh
Confidence 9987 5664 7777888765 5554332 23555555543
No 175
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.04 E-value=8.3e-11 Score=76.08 Aligned_cols=87 Identities=14% Similarity=0.142 Sum_probs=61.2
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhC--CCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHH
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSK--GVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHA 111 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~--~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 111 (162)
++++++|.|| ++|||.|+.. .+.+.++.+++.+. ++ .++.|..+ .+..+++.
T Consensus 20 ~~~~~lv~f~-~~~C~~C~~~-~~~~~~~~~~~~~~~~~~-~~~~vd~~-----------------------~~~~l~~~ 73 (111)
T 3uvt_A 20 AEGITFIKFY-APWCGHCKTL-APTWEELSKKEFPGLAGV-KIAEVDCT-----------------------AERNICSK 73 (111)
T ss_dssp HSSEEEEEEE-CSSCHHHHHH-HHHHHHHHTCCCCC-CCE-EEEEEETT-----------------------TCHHHHHH
T ss_pred cCCcEEEEEE-CCCChhHHHh-hHHHHHHHHHhhccCCce-EEEEEecc-----------------------ccHhHHHh
Confidence 4777888777 8999999997 99999998776533 44 55556543 23458899
Q ss_pred cCCccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 112 LGLELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 112 ~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
|++. ++|+ ++++++|+++..+.+... .+++.+.++
T Consensus 74 ~~v~--------~~Pt---~~~~~~g~~~~~~~g~~~---~~~l~~~l~ 108 (111)
T 3uvt_A 74 YSVR--------GYPT---LLLFRGGKKVSEHSGGRD---LDSLHRFVL 108 (111)
T ss_dssp TTCC--------SSSE---EEEEETTEEEEEECSCCS---HHHHHHHHH
T ss_pred cCCC--------cccE---EEEEeCCcEEEeccCCcC---HHHHHHHHH
Confidence 9987 5663 666679999887765433 245555543
No 176
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.01 E-value=4.9e-11 Score=79.91 Aligned_cols=43 Identities=12% Similarity=0.181 Sum_probs=34.1
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhC-CCCeEEEEEc
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSK-GVDEILCISV 79 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~-~~~~v~~is~ 79 (162)
++++++|.|| ++|||.|+.. .|.+.+++++++.. ++ .++.|..
T Consensus 24 ~~~~vlv~f~-a~wC~~C~~~-~p~~~~~~~~~~~~~~~-~~~~vd~ 67 (133)
T 2dj3_A 24 PKKDVLIEFY-APWCGHCKQL-EPIYTSLGKKYKGQKDL-VIAKMDA 67 (133)
T ss_dssp TTSEEEEEEC-CTTCSHHHHH-HHHHHHHHHHHTTSSSE-EEEEECT
T ss_pred CCCcEEEEEE-CCCChhHHHH-HHHHHHHHHHhcCCCCE-EEEEecC
Confidence 4778888887 8999999997 99999999999753 35 5555554
No 177
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.00 E-value=5.4e-11 Score=86.21 Aligned_cols=97 Identities=11% Similarity=0.035 Sum_probs=68.4
Q ss_pred CCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEE
Q 038822 22 DQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFL 101 (162)
Q Consensus 22 ~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l 101 (162)
.+++.+...-. ++++++|.|| ++||+.|... .|.+.++++++++ .+ .++.|..+.
T Consensus 102 l~~~~f~~~~~-~~~~vlv~F~-a~wC~~C~~~-~p~~~~l~~~~~~-~v-~~~~vd~~~-------------------- 156 (210)
T 3apq_A 102 LERREFDAAVN-SGELWFVNFY-SPGCSHCHDL-APTWREFAKEVDG-LL-RIGAVNCGD-------------------- 156 (210)
T ss_dssp CCHHHHHHHHH-HSCCEEEEEE-CTTCHHHHHH-HHHHHHHHHHTBT-TB-EEEEEETTT--------------------
T ss_pred ecHHHHHHHHc-cCCcEEEEEe-CCCChhHHHH-HHHHHHHHHHhcC-ce-EEEEEECCc--------------------
Confidence 34444443333 6788888888 8999999998 9999999998864 36 788777543
Q ss_pred EcCCchHHHHcCCccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 102 ADGSAKYTHALGLELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 102 ~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
+..+++.|++. ++|+ ++++.+|+++..+.+... .+++.+.++
T Consensus 157 ---~~~l~~~~~v~--------~~Pt---~~~~~~G~~~~~~~G~~~---~~~l~~~i~ 198 (210)
T 3apq_A 157 ---DRMLCRMKGVN--------SYPS---LFIFRSGMAAVKYNGDRS---KESLVAFAM 198 (210)
T ss_dssp ---CHHHHHHTTCC--------SSSE---EEEECTTSCCEECCSCCC---HHHHHHHHH
T ss_pred ---cHHHHHHcCCC--------cCCe---EEEEECCCceeEecCCCC---HHHHHHHHH
Confidence 24688889987 5664 777789998777765432 245555443
No 178
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=98.99 E-value=2.4e-10 Score=78.12 Aligned_cols=74 Identities=12% Similarity=0.155 Sum_probs=57.9
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
.+++++|.|| ++||++|+.. .|.+.++++++++ ++ .++.|..|. +..+++.|+
T Consensus 22 ~~k~vlv~F~-a~wC~~C~~~-~p~l~~l~~~~~~-~v-~~~~vd~d~-----------------------~~~~~~~~~ 74 (142)
T 1qgv_A 22 EDRVVVIRFG-HDWDPTCMKM-DEVLYSIAEKVKN-FA-VIYLVDITE-----------------------VPDFNKMYE 74 (142)
T ss_dssp SSSEEEEEEE-CTTSHHHHHH-HHHHHHHHHHHTT-TE-EEEEEETTT-----------------------CCTTTTSSC
T ss_pred CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHhCC-Ce-EEEEEcccc-----------------------CHHHHHHcC
Confidence 4788888888 8999999998 9999999999864 36 788887763 134677888
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEee
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVE 145 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~ 145 (162)
+. ++|+ ++++++|+++....+
T Consensus 75 i~--------~~Pt---~~~~~~G~~v~~~~g 95 (142)
T 1qgv_A 75 LY--------DPCT---VMFFFRNKHIMIDLG 95 (142)
T ss_dssp SC--------SSCE---EEEEETTEEEEEECC
T ss_pred CC--------CCCE---EEEEECCcEEEEecC
Confidence 86 5664 777789999887655
No 179
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=98.99 E-value=3e-10 Score=79.91 Aligned_cols=47 Identities=13% Similarity=0.237 Sum_probs=38.3
Q ss_pred ehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC
Q 038822 28 SVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN 80 (162)
Q Consensus 28 ~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d 80 (162)
.++++ +|+++||.|| ++|||+|+.+ +|.|.+++++++ ++ .++.|+.|
T Consensus 48 ~l~~~-~~k~vvv~F~-A~WC~pC~~~-~P~l~~l~~~~~--~v-~~~~v~~d 94 (167)
T 1z6n_A 48 RLQRI-ERRYRLLVAG-EMWCPDCQIN-LAALDFAQRLQP--NI-ELAIISKG 94 (167)
T ss_dssp HHHTC-CSCEEEEEEC-CTTCHHHHHH-HHHHHHHHHHCT--TE-EEEEECHH
T ss_pred HHHHh-CCCEEEEEEE-CCCChhHHHH-HHHHHHHHHHCC--Cc-EEEEEECC
Confidence 45665 7888888887 9999999998 999999998763 56 78888765
No 180
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.97 E-value=7.2e-10 Score=75.05 Aligned_cols=85 Identities=13% Similarity=0.173 Sum_probs=62.4
Q ss_pred CCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCC
Q 038822 35 GKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGL 114 (162)
Q Consensus 35 gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 114 (162)
++.+||.|| ++|||.|... .+.+.++.+++++ ++ .++.|+.+. +..+++.|++
T Consensus 50 ~~~vvv~f~-~~~C~~C~~~-~~~l~~l~~~~~~-~v-~~~~vd~~~-----------------------~~~l~~~~~v 102 (140)
T 1v98_A 50 APLTLVDFF-APWCGPCRLV-SPILEELARDHAG-RL-KVVKVNVDE-----------------------HPGLAARYGV 102 (140)
T ss_dssp CCEEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTT-TE-EEEEEETTT-----------------------CHHHHHHTTC
T ss_pred CCCEEEEEE-CCCCHHHHHH-HHHHHHHHHHccC-ce-EEEEEECCC-----------------------CHHHHHHCCC
Confidence 444667766 8999999997 9999999998864 47 788888753 2468889998
Q ss_pred ccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 115 ELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
. ++|+ ++++++|+++..+.+.... +++.+.|+
T Consensus 103 ~--------~~Pt---~~~~~~G~~~~~~~G~~~~---~~l~~~i~ 134 (140)
T 1v98_A 103 R--------SVPT---LVLFRRGAPVATWVGASPR---RVLEERLR 134 (140)
T ss_dssp C--------SSSE---EEEEETTEEEEEEESCCCH---HHHHHHHH
T ss_pred C--------ccCE---EEEEeCCcEEEEEeCCCCH---HHHHHHHH
Confidence 7 5664 6667899999888765332 44555544
No 181
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.97 E-value=1e-10 Score=77.86 Aligned_cols=85 Identities=20% Similarity=0.279 Sum_probs=62.4
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++|||.|... .+.+.++.++++ ++ .++.|+.+ .+..+.+.|+
T Consensus 35 ~~~~~vv~f~-~~~C~~C~~~-~~~l~~~~~~~~--~v-~~~~v~~~-----------------------~~~~~~~~~~ 86 (130)
T 1wmj_A 35 AGKVVIIDFT-ASWCGPCRFI-APVFAEYAKKFP--GA-VFLKVDVD-----------------------ELKEVAEKYN 86 (130)
T ss_dssp TTCBCBEECC-SSSCSCSSSS-HHHHHHHHHHCT--TB-CCEECCTT-----------------------TSGGGHHHHT
T ss_pred cCCEEEEEEE-CCCChhHHHH-HHHHHHHHHHCC--CC-EEEEEecc-----------------------chHHHHHHcC
Confidence 5788888887 8999999998 999999998875 56 67766663 2456889999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
+. ++|+ ++++++|+++..+.+. +.+++.+.|+.
T Consensus 87 v~--------~~Pt---~~~~~~g~~~~~~~g~----~~~~l~~~l~~ 119 (130)
T 1wmj_A 87 VE--------AMPT---FLFIKDGAEADKVVGA----RKDDLQNTIVK 119 (130)
T ss_dssp CC--------SSCC---CCBCTTTTCCBCCCTT----CTTTHHHHHHH
T ss_pred CC--------ccce---EEEEeCCeEEEEEeCC----CHHHHHHHHHH
Confidence 87 5663 5555699988766552 23566666653
No 182
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=98.95 E-value=1.2e-09 Score=67.23 Aligned_cols=78 Identities=14% Similarity=0.127 Sum_probs=54.5
Q ss_pred EEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCccc
Q 038822 38 VILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELD 117 (162)
Q Consensus 38 vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~ 117 (162)
.|+.|| ++|||.|... .+.+.++.+++.+ ++ .++.|..+ .+.+++++||+.
T Consensus 4 ~vv~f~-~~~C~~C~~~-~~~l~~~~~~~~~-~~-~~~~vd~~-----------------------~~~~~~~~~~v~-- 54 (85)
T 1nho_A 4 NIEVFT-SPTCPYCPMA-IEVVDEAKKEFGD-KI-DVEKIDIM-----------------------VDREKAIEYGLM-- 54 (85)
T ss_dssp CEEEES-CSSSCCSTTH-HHHHHHHHHHHCS-SC-CEEEECTT-----------------------TCGGGGGGTCSS--
T ss_pred EEEEEE-CCCCcchHHH-HHHHHHHHHHhcC-Ce-EEEEEECC-----------------------CCHHHHHhCCce--
Confidence 456666 8999999998 9999999988864 57 78777764 234678889987
Q ss_pred cccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 118 LSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 118 ~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
++| ++++ +|++ .+.+... .+++.+.|+
T Consensus 55 ------~~P----t~~~-~G~~--~~~G~~~---~~~l~~~l~ 81 (85)
T 1nho_A 55 ------AVP----AIAI-NGVV--RFVGAPS---REELFEAIN 81 (85)
T ss_dssp ------CSS----EEEE-TTTE--EEECSSC---CHHHHHHHH
T ss_pred ------eeC----EEEE-CCEE--EEccCCC---HHHHHHHHH
Confidence 567 4444 8888 4444322 255666554
No 183
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.94 E-value=1.2e-09 Score=67.27 Aligned_cols=80 Identities=16% Similarity=0.221 Sum_probs=54.6
Q ss_pred eEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCcc
Q 038822 37 KVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLEL 116 (162)
Q Consensus 37 ~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~ 116 (162)
..++.|| ++|||.|... .+.+.++.++++ .++ .++.|..+. +.+++++||+.
T Consensus 4 ~~vv~f~-~~~C~~C~~~-~~~l~~~~~~~~-~~~-~~~~vd~~~-----------------------~~~~~~~~~v~- 55 (85)
T 1fo5_A 4 VKIELFT-SPMCPHCPAA-KRVVEEVANEMP-DAV-EVEYINVME-----------------------NPQKAMEYGIM- 55 (85)
T ss_dssp EEEEEEE-CCCSSCCCTH-HHHHHHHHHHCS-SSE-EEEEEESSS-----------------------SCCTTTSTTTC-
T ss_pred eEEEEEe-CCCCCchHHH-HHHHHHHHHHcC-Cce-EEEEEECCC-----------------------CHHHHHHCCCc-
Confidence 4566666 8999999997 999999988876 356 788887752 23567788886
Q ss_pred ccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 117 DLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 117 ~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
++| ++++ +|++ .+.+... .+++.+.|++
T Consensus 56 -------~~P----t~~~-~G~~--~~~G~~~---~~~l~~~l~~ 83 (85)
T 1fo5_A 56 -------AVP----TIVI-NGDV--EFIGAPT---KEALVEAIKK 83 (85)
T ss_dssp -------CSS----EEEE-TTEE--ECCSSSS---SHHHHHHHHH
T ss_pred -------ccC----EEEE-CCEE--eeecCCC---HHHHHHHHHH
Confidence 566 4444 8988 4443322 3556666543
No 184
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.93 E-value=4.8e-10 Score=74.67 Aligned_cols=69 Identities=9% Similarity=-0.041 Sum_probs=50.8
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhC----CCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHH
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSK----GVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYT 109 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~----~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 109 (162)
.+++++|.|| ++||++|+.. .|.+.++++++... ++ .++.|..+ .+..++
T Consensus 32 ~~~~vlv~F~-a~wC~~C~~~-~p~~~~la~~~~~~~~~~~v-~~~~vd~~-----------------------~~~~l~ 85 (127)
T 3h79_A 32 PEKDVFVLYY-VPWSRHSVAA-MRLWDDLSMSQSQKRNHLTF-VAARIDGE-----------------------KYPDVI 85 (127)
T ss_dssp TTCEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHHTSTTTTTE-EEEEEETT-----------------------TCHHHH
T ss_pred CCCCEEEEEE-CCccHHHHHH-hHHHHHHHHHHHhcccCCCe-EEEEEEcc-----------------------ccHhHH
Confidence 3677888887 9999999997 99999999988632 24 45555543 246788
Q ss_pred HHcCCccccccCCCCccceeEEEEEc-CCeE
Q 038822 110 HALGLELDLSEKGLGTQSRRFALLVD-DLKV 139 (162)
Q Consensus 110 ~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i 139 (162)
++|++. ++|+ +++++ ++++
T Consensus 86 ~~~~v~--------~~Pt---~~~~~~g~~~ 105 (127)
T 3h79_A 86 ERMRVS--------GFPT---MRYYTRIDKQ 105 (127)
T ss_dssp HHTTCC--------SSSE---EEEECSSCSS
T ss_pred HhcCCc--------cCCE---EEEEeCCCCC
Confidence 999987 5664 77888 4454
No 185
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.91 E-value=1.8e-09 Score=79.11 Aligned_cols=71 Identities=13% Similarity=0.199 Sum_probs=55.8
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCC--CCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHH
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKG--VDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHA 111 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~--~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 111 (162)
++++++|.|| ++||+.|+.. .|.+.++++++++.+ + .++.|..+ .+..++++
T Consensus 31 ~~~~v~v~F~-a~wC~~C~~~-~p~~~~~~~~~~~~~~~~-~~~~vd~~-----------------------~~~~l~~~ 84 (241)
T 3idv_A 31 DKDTVLLEFY-APWCGHCKQF-APEYEKIANILKDKDPPI-PVAKIDAT-----------------------SASVLASR 84 (241)
T ss_dssp TCSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHHTSSSCC-CEEEEETT-----------------------TCHHHHHH
T ss_pred cCCeEEEEEE-CCCCHHHHHh-hHHHHHHHHHHhhcCCce-EEEEEecc-----------------------CCHHHHHh
Confidence 5787888887 8999999998 999999999998765 5 56666553 34578999
Q ss_pred cCCccccccCCCCccceeEEEEEcCCeEEE
Q 038822 112 LGLELDLSEKGLGTQSRRFALLVDDLKVKA 141 (162)
Q Consensus 112 ~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~ 141 (162)
|++. ++|+ ++++++|+++.
T Consensus 85 ~~v~--------~~Pt---~~~~~~g~~~~ 103 (241)
T 3idv_A 85 FDVS--------GYPT---IKILKKGQAVD 103 (241)
T ss_dssp TTCC--------SSSE---EEEEETTEEEE
T ss_pred cCCC--------cCCE---EEEEcCCCccc
Confidence 9987 5664 77778887763
No 186
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=98.88 E-value=3.3e-11 Score=84.37 Aligned_cols=86 Identities=12% Similarity=0.119 Sum_probs=59.2
Q ss_pred eeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcC
Q 038822 25 QQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADG 104 (162)
Q Consensus 25 ~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~ 104 (162)
+.++.... +++++||.|| ++|||+|+.. .|.|.++.+..+. ++ .++.|+.+....
T Consensus 37 ~~~~~~~~-~~k~vlv~F~-a~WC~~C~~~-~p~l~~~~~~~~~-~~-~~~~v~~d~~~~-------------------- 91 (164)
T 1sen_A 37 DGKKEAAA-SGLPLMVIIH-KSWCGACKAL-KPKFAESTEISEL-SH-NFVMVNLEDEEE-------------------- 91 (164)
T ss_dssp HHHHHHHH-HTCCEEEEEE-CTTCHHHHHH-HHHHHTCHHHHHH-HT-TSEEEEEEGGGS--------------------
T ss_pred HHHHHHHh-cCCeEEEEEE-CCCCHHHHHH-HHHHHHHHHHhhc-CC-eEEEEEecCCch--------------------
Confidence 45566664 7899999998 8999999998 9999997766543 45 677777653211
Q ss_pred CchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeec
Q 038822 105 SAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVES 146 (162)
Q Consensus 105 ~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~ 146 (162)
.+.+.|++.. .++| +++++| +|+++....+.
T Consensus 92 --~~~~~~~~~~------~~~P---t~~~~d~~G~~~~~~~G~ 123 (164)
T 1sen_A 92 --PKDEDFSPDG------GYIP---RILFLDPSGKVHPEIINE 123 (164)
T ss_dssp --CSCGGGCTTC------SCSS---EEEEECTTSCBCTTCCCT
T ss_pred --HHHHHhcccC------CcCC---eEEEECCCCCEEEEEeCC
Confidence 0234455531 1355 488887 99998877764
No 187
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.86 E-value=1.1e-09 Score=72.21 Aligned_cols=67 Identities=12% Similarity=0.094 Sum_probs=52.8
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
.+++++|.|| ++|||.|... .+.+.++++++++ ++ .++.|..+. +..+++.|+
T Consensus 20 ~~~~~lv~f~-a~~C~~C~~~-~~~~~~~~~~~~~-~~-~~~~vd~~~-----------------------~~~~~~~~~ 72 (122)
T 3aps_A 20 GKTHWVVDFY-APWCGPCQNF-APEFELLARMIKG-KV-RAGKVDCQA-----------------------YPQTCQKAG 72 (122)
T ss_dssp CSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTT-TC-EEEEEETTT-----------------------CHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCHHHHHH-HHHHHHHHHHhcC-Ce-EEEEEeCcC-----------------------CHHHHHHcC
Confidence 4677888887 8999999997 9999999999875 57 888888763 235888999
Q ss_pred CccccccCCCCccceeEEEEEc-CCe
Q 038822 114 LELDLSEKGLGTQSRRFALLVD-DLK 138 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~-~g~ 138 (162)
+. ++|+ +++++ +|+
T Consensus 73 v~--------~~Pt---~~~~~~~~~ 87 (122)
T 3aps_A 73 IK--------AYPS---VKLYQYERA 87 (122)
T ss_dssp CC--------SSSE---EEEEEEEGG
T ss_pred CC--------ccce---EEEEeCCCc
Confidence 87 5664 77777 665
No 188
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.85 E-value=7.6e-10 Score=72.77 Aligned_cols=44 Identities=16% Similarity=0.179 Sum_probs=37.0
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHh----CCCCeEEEEEcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQS----KGVDEILCISVN 80 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~----~~~~~v~~is~d 80 (162)
++++++|.|| ++||+.|+.. .|.+.++++++++ .++ .++.|..+
T Consensus 24 ~~~~vlv~f~-a~wC~~C~~~-~p~~~~~~~~~~~~~~~~~v-~~~~vd~~ 71 (121)
T 2djj_A 24 DTKDVLIEFY-APWCGHCKAL-APKYEELGALYAKSEFKDRV-VIAKVDAT 71 (121)
T ss_dssp TTSCEEEEEE-CSSCTTHHHH-HHHHHHHHHHHTTSSCTTSS-EEEEEETT
T ss_pred CCCCEEEEEE-CCCCHhHHHh-hHHHHHHHHHHhhcccCCce-EEEEEECc
Confidence 5788888888 8999999997 9999999999976 256 77777765
No 189
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.84 E-value=6e-09 Score=75.75 Aligned_cols=86 Identities=13% Similarity=0.000 Sum_probs=61.6
Q ss_pred CCeE-EEEEeeCCCCCCCCcCCHhHHHHhHHHHHh---CCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHH
Q 038822 35 GKKV-ILFGVPGDFTPTCSLKHVPGFIEKADELQS---KGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTH 110 (162)
Q Consensus 35 gk~v-vl~f~~~~~cp~C~~~~~~~l~~~~~~~~~---~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 110 (162)
++++ ++.|| ++|||+|+.. .|.+.++++++++ .++ .++.|..+ .+..+++
T Consensus 133 ~~~~~~v~F~-a~wC~~C~~~-~p~~~~l~~~~~~~~~~~v-~~~~vd~~-----------------------~~~~l~~ 186 (226)
T 1a8l_A 133 DQDVRILVFV-TPTCPYCPLA-VRMAHKFAIENTKAGKGKI-LGDMVEAI-----------------------EYPEWAD 186 (226)
T ss_dssp CSCEEEEEEE-CSSCTTHHHH-HHHHHHHHHHHHHTTCCCE-EEEEEEGG-----------------------GCHHHHH
T ss_pred CCCcEEEEEe-CCCCCccHHH-HHHHHHHHHhcccccCCcE-EEEEEEcc-----------------------cCHHHHH
Confidence 4556 67776 9999999998 9999999999974 256 66666654 2356889
Q ss_pred HcCCccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 111 ALGLELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 111 ~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
.|++. ++|+ ++++++|+++..+.|.... +++.+.|+
T Consensus 187 ~~~v~--------~~Pt---~~~~~~G~~~~~~~G~~~~---~~l~~~l~ 222 (226)
T 1a8l_A 187 QYNVM--------AVPK---IVIQVNGEDRVEFEGAYPE---KMFLEKLL 222 (226)
T ss_dssp HTTCC--------SSCE---EEEEETTEEEEEEESCCCH---HHHHHHHH
T ss_pred hCCCc--------ccCe---EEEEeCCceeEEEcCCCCH---HHHHHHHH
Confidence 99997 5663 6666799998877765332 44444443
No 190
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.84 E-value=1.8e-09 Score=73.54 Aligned_cols=87 Identities=10% Similarity=0.002 Sum_probs=63.3
Q ss_pred CCCeEEEEEeeCCC--CCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHH
Q 038822 34 AGKKVILFGVPGDF--TPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHA 111 (162)
Q Consensus 34 ~gk~vvl~f~~~~~--cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 111 (162)
.++++||.|| +.| |+.|+.- .|.|.++.+++.++.+ .|+-|.+| .+.+++++
T Consensus 33 ~~~~vlVdF~-a~~crCgpCk~i-aPvleela~e~~g~~v-~~~KVdvD-----------------------e~~~lA~~ 86 (140)
T 2qgv_A 33 QAPDGVVLLS-SDPKRTPEVSDN-PVMIGELLHEFPDYTW-QVAIADLE-----------------------QSEAIGDR 86 (140)
T ss_dssp TCSSEEEEEC-CCTTTCTTTTHH-HHHHHHHHTTCTTSCC-EEEECCHH-----------------------HHHHHHHH
T ss_pred CCCCEEEEEe-CCcccCCcHHHH-HhHHHHHHHHcCCCeE-EEEEEECC-----------------------CCHHHHHH
Confidence 4566777555 888 9999997 9999999998865436 56555443 34679999
Q ss_pred cCCccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 112 LGLELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 112 ~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
|||. ++|+ .++.+||+++....|..+. +.+.+.|+
T Consensus 87 ygV~--------sIPT---lilFk~G~~v~~~~G~~~k---~~l~~~i~ 121 (140)
T 2qgv_A 87 FGAF--------RFPA---TLVFTGGNYRGVLNGIHPW---AELINLMR 121 (140)
T ss_dssp HTCC--------SSSE---EEEEETTEEEEEEESCCCH---HHHHHHHH
T ss_pred cCCc--------cCCE---EEEEECCEEEEEEecCCCH---HHHHHHHH
Confidence 9998 6774 7778899999999876443 44444443
No 191
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=98.79 E-value=2.9e-09 Score=79.23 Aligned_cols=88 Identities=11% Similarity=0.100 Sum_probs=62.6
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
+++++||.|| ++||+.|... .|.|.++++++. ++ .++.|..+.+ .+++.|+
T Consensus 132 ~~k~VvV~Fy-a~wC~~Ck~l-~p~l~~La~~~~--~v-~f~kVd~d~~------------------------~l~~~~~ 182 (245)
T 1a0r_P 132 KITTIVVHIY-EDGIKGCDAL-NSSLICLAAEYP--MV-KFCKIKASNT------------------------GAGDRFS 182 (245)
T ss_dssp TTCEEEEEEE-CTTSTTHHHH-HHHHHHHHHHCT--TS-EEEEEEHHHH------------------------CCTTSSC
T ss_pred CCCEEEEEEE-CCCChHHHHH-HHHHHHHHHHCC--CC-EEEEEeCCcH------------------------HHHHHCC
Confidence 3778888888 8999999997 999999999885 47 7888876420 1345677
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecC---C-cceeCCHHHHHhc
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESG---G-DFTVSSADDILKS 161 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~---~-~~~~~~~~~il~~ 161 (162)
+. ++|+ ++++++|+++..+++.. + .+....++.+|+.
T Consensus 183 I~--------~~PT---ll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~ 223 (245)
T 1a0r_P 183 SD--------VLPT---LLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNE 223 (245)
T ss_dssp TT--------TCSE---EEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHT
T ss_pred CC--------CCCE---EEEEECCEEEEEEeCCcccccccccHHHHHHHHHH
Confidence 76 5664 66777999999888742 1 1223356666653
No 192
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.79 E-value=2.1e-09 Score=73.54 Aligned_cols=83 Identities=13% Similarity=0.099 Sum_probs=51.4
Q ss_pred CeEEEEEeeCCC--CCCCCcCCHhHHHHhHHHHHhCCCCe--EEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHH
Q 038822 36 KKVILFGVPGDF--TPTCSLKHVPGFIEKADELQSKGVDE--ILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHA 111 (162)
Q Consensus 36 k~vvl~f~~~~~--cp~C~~~~~~~l~~~~~~~~~~~~~~--v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 111 (162)
+.+||+|+ ++| |+.|+.. .|.|.++++++ + ++ . ++.|..|. +.+++++
T Consensus 35 ~~~vv~f~-~~~~~C~~C~~l-~P~l~~la~~~-~-~v-~~~~~~Vd~d~-----------------------~~~la~~ 86 (142)
T 2es7_A 35 GDGVILLS-SDPRRTPEVSDN-PVMIAELLREF-P-QF-DWQVAVADLEQ-----------------------SEAIGDR 86 (142)
T ss_dssp CSEEEEEC-CCSCC----CCH-HHHHHHHHHTC-T-TS-CCEEEEECHHH-----------------------HHHHHHT
T ss_pred CCEEEEEE-CCCCCCccHHHH-HHHHHHHHHHh-c-cc-ceeEEEEECCC-----------------------CHHHHHh
Confidence 34666665 666 9999997 99999999988 3 46 6 77776542 2458889
Q ss_pred cCCccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 112 LGLELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 112 ~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
|++. ++|+ ++++.+|+++..+.|.... +++.+.++
T Consensus 87 ~~V~--------~iPT---~~~fk~G~~v~~~~G~~~~---~~l~~~i~ 121 (142)
T 2es7_A 87 FNVR--------RFPA---TLVFTDGKLRGALSGIHPW---AELLTLMR 121 (142)
T ss_dssp TTCC--------SSSE---EEEESCC----CEESCCCH---HHHHHHHH
T ss_pred cCCC--------cCCe---EEEEeCCEEEEEEeCCCCH---HHHHHHHH
Confidence 9987 5665 8888999999888765332 44444443
No 193
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=98.76 E-value=6e-09 Score=69.09 Aligned_cols=72 Identities=18% Similarity=0.379 Sum_probs=55.6
Q ss_pred CCCeEEEEEeeCC-------CCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCc
Q 038822 34 AGKKVILFGVPGD-------FTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSA 106 (162)
Q Consensus 34 ~gk~vvl~f~~~~-------~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~ 106 (162)
++++++|.|| ++ |||.|+.. .|.+.++++++++ ++ .++.|..++... | .|.+.
T Consensus 23 ~~~~v~v~F~-a~~~~~~~~wC~~C~~~-~p~l~~~~~~~~~-~~-~~~~vd~~~~~~---~-------------~d~~~ 82 (123)
T 1wou_A 23 NGKTIFAYFT-GSKDAGGKSWCPDCVQA-EPVVREGLKHISE-GC-VFIYCQVGEKPY---W-------------KDPNN 82 (123)
T ss_dssp TTSEEEEEEE-CCBCTTCCBSCHHHHHH-HHHHHHHGGGCCT-TE-EEEEEECCCHHH---H-------------HCTTC
T ss_pred CCCEEEEEEE-ccCCCCCCCcCHHHHHh-hHHHHHHHHHcCC-Cc-EEEEEECCCchh---h-------------hchhH
Confidence 5788888888 88 99999998 9999999887754 57 888888875421 1 25567
Q ss_pred hHHHHcCCccccccCCCCccceeEEEEEcC
Q 038822 107 KYTHALGLELDLSEKGLGTQSRRFALLVDD 136 (162)
Q Consensus 107 ~~~~~~gv~~~~~~~~~~~~~~~~~~ii~~ 136 (162)
.+++.|++. ++|+ ++++++
T Consensus 83 ~~~~~~~i~--------~~Pt---~~~~~~ 101 (123)
T 1wou_A 83 DFRKNLKVT--------AVPT---LLKYGT 101 (123)
T ss_dssp HHHHHHCCC--------SSSE---EEETTS
T ss_pred HHHHHCCCC--------eeCE---EEEEcC
Confidence 899999997 5664 777775
No 194
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=98.75 E-value=5.5e-09 Score=72.36 Aligned_cols=72 Identities=14% Similarity=0.168 Sum_probs=55.3
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
.++++||.|| ++||++|+.- .|.|.+++++++++ + .|+-|.+|. ..++++.|+
T Consensus 40 ~~k~VVVdF~-A~WCgPCk~m-~PvleelA~e~~~~-v-~f~kVDVDe-----------------------~~e~a~~y~ 92 (160)
T 2av4_A 40 DERLVCIRFG-HDYDPDCMKM-DELLYKVADDIKNF-C-VIYLVDITE-----------------------VPDFNTMYE 92 (160)
T ss_dssp SSSEEEEEEE-CTTSHHHHHH-HHHHHHHHHHHTTT-E-EEEEEETTT-----------------------CCTTTTTTT
T ss_pred CCCEEEEEEE-CCCChhHHHH-HHHHHHHHHHccCC-c-EEEEEECCC-----------------------CHHHHHHcC
Confidence 4677888887 9999999997 99999999998643 5 666666652 355789999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEE
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAAN 143 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~ 143 (162)
+. .+|+ +++..+|+.+.+.
T Consensus 93 V~--------siPT---~~fFk~G~~v~vd 111 (160)
T 2av4_A 93 LY--------DPVS---VMFFYRNKHMMID 111 (160)
T ss_dssp CC--------SSEE---EEEEETTEEEEEE
T ss_pred CC--------CCCE---EEEEECCEEEEEe
Confidence 97 5663 6677899988644
No 195
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.75 E-value=6.6e-09 Score=70.54 Aligned_cols=84 Identities=15% Similarity=0.071 Sum_probs=62.5
Q ss_pred CeEEEEEeeCCCC--CCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 36 KKVILFGVPGDFT--PTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 36 k~vvl~f~~~~~c--p~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
+++||.|| ++|| +.|+.- .|.|.++.+++.+ .+ .++-|..| .+..++++||
T Consensus 34 ~~vlVdF~-A~wCr~gpCk~i-aPvleela~e~~~-~v-~~~KVdvD-----------------------e~~~la~~yg 86 (137)
T 2qsi_A 34 KIVVLFFR-GDAVRFPEAADL-AVVLPELINAFPG-RL-VAAEVAAE-----------------------AERGLMARFG 86 (137)
T ss_dssp SEEEEEEC-CCTTTCTTHHHH-HHHHHHHHHTSTT-TE-EEEEECGG-----------------------GHHHHHHHHT
T ss_pred CcEEEEEe-CCccCCCchhhH-HhHHHHHHHHccC-Cc-EEEEEECC-----------------------CCHHHHHHcC
Confidence 37777777 8899 999997 9999999998864 25 55545443 3567999999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHh
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
|. ++|+ .++.+||+++....+..+. +++.+.|+
T Consensus 87 V~--------siPT---lilFkdG~~v~~~vG~~~k---~~l~~~l~ 119 (137)
T 2qsi_A 87 VA--------VCPS---LAVVQPERTLGVIAKIQDW---SSYLAQIG 119 (137)
T ss_dssp CC--------SSSE---EEEEECCEEEEEEESCCCH---HHHHHHHH
T ss_pred Cc--------cCCE---EEEEECCEEEEEEeCCCCH---HHHHHHHH
Confidence 98 5664 7778899999999876543 44444443
No 196
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.72 E-value=5.9e-08 Score=70.90 Aligned_cols=71 Identities=8% Similarity=0.188 Sum_probs=54.6
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCC--CCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHH
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKG--VDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHA 111 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~--~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 111 (162)
.+++++|.|| ++||+.|+.. .|.+.++++++++.+ + .++.|..+. +..+++.
T Consensus 146 ~~~~~~v~f~-a~wC~~C~~~-~p~~~~~a~~~~~~~~~v-~~~~vd~~~-----------------------~~~l~~~ 199 (241)
T 3idv_A 146 DADIILVEFY-APWCGHCKKL-APEYEKAAKELSKRSPPI-PLAKVDATA-----------------------ETDLAKR 199 (241)
T ss_dssp HCSEEEEEEE-CTTCTGGGGT-HHHHHHHHHHHHTSSSCC-CEEEEETTT-----------------------CHHHHHH
T ss_pred cCCeEEEEEE-CCCCHHHHHh-HHHHHHHHHHHhccCCcE-EEEEEECCC-----------------------CHHHHHH
Confidence 4567777777 8999999998 999999999998654 5 566666542 3568899
Q ss_pred cCCccccccCCCCccceeEEEEEcCCeEEE
Q 038822 112 LGLELDLSEKGLGTQSRRFALLVDDLKVKA 141 (162)
Q Consensus 112 ~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~ 141 (162)
|++. ++|+ .+++++|+.+.
T Consensus 200 ~~v~--------~~Pt---~~~~~~g~~~~ 218 (241)
T 3idv_A 200 FDVS--------GYPT---LKIFRKGRPYD 218 (241)
T ss_dssp TTCC--------SSSE---EEEEETTEEEE
T ss_pred cCCc--------ccCE---EEEEECCeEEE
Confidence 9987 5664 77777888765
No 197
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.71 E-value=2.8e-09 Score=71.98 Aligned_cols=70 Identities=9% Similarity=0.031 Sum_probs=52.8
Q ss_pred CCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCC
Q 038822 35 GKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGL 114 (162)
Q Consensus 35 gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 114 (162)
|+++||.|| ++||+.|+.. .|.+.++++++. ++ .++.|..+.. . +.|++
T Consensus 30 ~~~vvv~f~-a~wC~~C~~~-~p~l~~la~~~~--~v-~~~~vd~~~~--------------~------------~~~~i 78 (135)
T 2dbc_A 30 DLWVVIHLY-RSSVPMCLVV-NQHLSVLARKFP--ET-KFVKAIVNSC--------------I------------EHYHD 78 (135)
T ss_dssp SCEEEEEEC-CTTCHHHHHH-HHHHHHHHHHCS--SE-EEEEECCSSS--------------C------------SSCCS
T ss_pred CCEEEEEEE-CCCChHHHHH-HHHHHHHHHHCC--Cc-EEEEEEhhcC--------------c------------ccCCC
Confidence 467888887 8999999997 999999988873 46 6777766531 0 46777
Q ss_pred ccccccCCCCccceeEEEEEcCCeEEEEEeec
Q 038822 115 ELDLSEKGLGTQSRRFALLVDDLKVKAANVES 146 (162)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~ 146 (162)
. ++|+ ++++++|+++....+.
T Consensus 79 ~--------~~Pt---~~~~~~G~~v~~~~G~ 99 (135)
T 2dbc_A 79 N--------CLPT---IFVYKNGQIEGKFIGI 99 (135)
T ss_dssp S--------CCSE---EEEESSSSCSEEEEST
T ss_pred C--------CCCE---EEEEECCEEEEEEEeE
Confidence 6 5664 7777899999888875
No 198
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.71 E-value=5.8e-09 Score=85.30 Aligned_cols=77 Identities=5% Similarity=0.093 Sum_probs=58.8
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHh--CCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHH
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQS--KGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHA 111 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~--~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 111 (162)
.+++++|.|| ++||++|+.. .|.+.++++++++ .++ .++.|..+. |.+.+++++
T Consensus 29 ~~k~vlV~Fy-A~WC~pCk~~-~P~l~~la~~~~~~~~~v-~~~~VD~d~---------------------d~~~~l~~~ 84 (519)
T 3t58_A 29 SSSAWAVEFF-ASWCGHAIAF-APTWKELANDVKDWRPAL-NLAVLDCAE---------------------ETNSAVCRE 84 (519)
T ss_dssp CSSEEEEEEE-CTTSHHHHHH-HHHHHHHHHHHGGGTTTE-EEEEEETTS---------------------GGGHHHHHH
T ss_pred CCCeEEEEEE-CCCCHHHHHH-HHHHHHHHHHhhCcCCcE-EEEEEECCc---------------------cccHHHHHH
Confidence 3577778887 9999999998 9999999999986 346 777787753 345789999
Q ss_pred cCCccccccCCCCccceeEEEEEc----CCeEEEEEee
Q 038822 112 LGLELDLSEKGLGTQSRRFALLVD----DLKVKAANVE 145 (162)
Q Consensus 112 ~gv~~~~~~~~~~~~~~~~~~ii~----~g~i~~~~~~ 145 (162)
|+|. ++|+ +++++ +|+++....+
T Consensus 85 ~~V~--------~~PT---l~~f~~g~~~G~~~~~~~g 111 (519)
T 3t58_A 85 FNIA--------GFPT---VRFFQAFTKNGSGATLPGA 111 (519)
T ss_dssp TTCC--------SBSE---EEEECTTCCSCCCEEECCS
T ss_pred cCCc--------ccCE---EEEEcCcccCCCceeEecC
Confidence 9997 5665 77777 5665555554
No 199
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.70 E-value=1.6e-08 Score=77.11 Aligned_cols=71 Identities=10% Similarity=0.171 Sum_probs=55.6
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
.+++++|.|| ++||+.|+.. .|.+.++++++.+. + .++.|..|. +.+..+++.|+
T Consensus 34 ~~~~vlV~F~-A~wC~~C~~~-~p~~~~la~~~~~~-~-~~~~v~~d~---------------------~~~~~l~~~~~ 88 (298)
T 3ed3_A 34 TNYTSLVEFY-APWCGHCKKL-SSTFRKAAKRLDGV-V-QVAAVNCDL---------------------NKNKALCAKYD 88 (298)
T ss_dssp SSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTTT-S-EEEEEETTS---------------------TTTHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCHHHHHH-HHHHHHHHHHccCC-c-EEEEEEccC---------------------ccCHHHHHhCC
Confidence 3677888888 9999999998 99999999998754 6 888888872 12467899999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEE
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVK 140 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~ 140 (162)
+. ++|+ ++++++|+++
T Consensus 89 I~--------~~Pt---~~~~~~g~~v 104 (298)
T 3ed3_A 89 VN--------GFPT---LMVFRPPKID 104 (298)
T ss_dssp CC--------BSSE---EEEEECCCC-
T ss_pred CC--------ccce---EEEEECCcee
Confidence 87 5664 7777877653
No 200
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=98.64 E-value=7.5e-08 Score=58.04 Aligned_cols=61 Identities=18% Similarity=0.115 Sum_probs=44.3
Q ss_pred EEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCcccc
Q 038822 39 ILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDL 118 (162)
Q Consensus 39 vl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~ 118 (162)
.|.|| ++|||.|+.. .+.+.++.+++.. ++ .++.|. +.+++++||+.
T Consensus 3 ~v~f~-a~wC~~C~~~-~~~l~~~~~~~~~-~~-~~~~v~--------------------------~~~~~~~~~v~--- 49 (77)
T 1ilo_A 3 KIQIY-GTGCANCQML-EKNAREAVKELGI-DA-EFEKIK--------------------------EMDQILEAGLT--- 49 (77)
T ss_dssp EEEEE-CSSSSTTHHH-HHHHHHHHHHTTC-CE-EEEEEC--------------------------SHHHHHHHTCS---
T ss_pred EEEEE-cCCChhHHHH-HHHHHHHHHHcCC-ce-EEEEec--------------------------CHHHHHHCCCC---
Confidence 46777 6799999997 9999998887652 34 444442 35688899987
Q ss_pred ccCCCCccceeEEEEEcCCeEEEE
Q 038822 119 SEKGLGTQSRRFALLVDDLKVKAA 142 (162)
Q Consensus 119 ~~~~~~~~~~~~~~ii~~g~i~~~ 142 (162)
++|+ +++ +|+++..
T Consensus 50 -----~~Pt---~~~--~G~~~~~ 63 (77)
T 1ilo_A 50 -----ALPG---LAV--DGELKIM 63 (77)
T ss_dssp -----SSSC---EEE--TTEEEEC
T ss_pred -----cCCE---EEE--CCEEEEc
Confidence 6773 444 8988765
No 201
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=98.63 E-value=8.1e-10 Score=71.89 Aligned_cols=74 Identities=14% Similarity=0.110 Sum_probs=50.7
Q ss_pred eeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcC
Q 038822 25 QQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADG 104 (162)
Q Consensus 25 ~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~ 104 (162)
..++|+++ .++.+||.|| ++|||.|+.. .|.+.++.+++ ..+-+..+.. .|.
T Consensus 3 ~~~~la~~-~~k~~vV~F~-A~WC~~C~~~-~p~~~~~a~~~------~~v~~~~~~~-------------------~~~ 54 (106)
T 3kp8_A 3 LAVGLAAH-LRQIGGTMYG-AYWCPHCQDQ-KELFGAAFDQV------PYVECSPNGP-------------------GTP 54 (106)
T ss_dssp HHHHHHHH-HHHHTCEEEE-CTTCHHHHHH-HHHHGGGGGGS------CEEESCTTCT-------------------TSC
T ss_pred HhhHHHHh-cCCCEEEEEE-CCCCHHHHHH-HHHHHHHHHhC------CEEEEecccc-------------------cch
Confidence 45678886 6888888888 8999999997 99998887433 2222221110 024
Q ss_pred CchHHHHcCCccccccCCCCccceeEEEEEcCCeE
Q 038822 105 SAKYTHALGLELDLSEKGLGTQSRRFALLVDDLKV 139 (162)
Q Consensus 105 ~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~~g~i 139 (162)
+..+++.|++. ++| ++++ +|+.
T Consensus 55 ~~~l~~~~~V~--------~~P----T~~i-~G~~ 76 (106)
T 3kp8_A 55 QAQECTEAGIT--------SYP----TWII-NGRT 76 (106)
T ss_dssp CCHHHHHTTCC--------SSS----EEEE-TTEE
T ss_pred hHHHHHHcCCe--------EeC----EEEE-CCEE
Confidence 57899999997 677 4555 8874
No 202
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.62 E-value=3.7e-08 Score=72.69 Aligned_cols=68 Identities=6% Similarity=0.174 Sum_probs=52.8
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHh--CCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHH
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQS--KGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHA 111 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~--~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 111 (162)
.+++++|.|| ++||+.|+.. .|.+.++++++++ .++ .++.|+.+. |.+..+++.
T Consensus 29 ~~~~vlv~F~-a~wC~~C~~~-~p~~~~l~~~~~~~~~~v-~~~~vd~~~---------------------~~~~~l~~~ 84 (244)
T 3q6o_A 29 SRSAWAVEFF-ASWCGHCIAF-APTWXALAEDVKAWRPAL-YLAALDCAE---------------------ETNSAVCRD 84 (244)
T ss_dssp CSSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHTGGGTTTE-EEEEEETTS---------------------TTTHHHHHH
T ss_pred CCCeEEEEEE-CCcCHHHHHH-HHHHHHHHHHHHhccCcE-EEEEEeCCc---------------------hhhHHHHHH
Confidence 3577878887 8999999997 9999999999986 356 777787642 235678899
Q ss_pred cCCccccccCCCCccceeEEEEEcC
Q 038822 112 LGLELDLSEKGLGTQSRRFALLVDD 136 (162)
Q Consensus 112 ~gv~~~~~~~~~~~~~~~~~~ii~~ 136 (162)
|++. ++|+ ++++++
T Consensus 85 ~~v~--------~~Pt---~~~~~~ 98 (244)
T 3q6o_A 85 FNIP--------GFPT---VRFFXA 98 (244)
T ss_dssp TTCC--------SSSE---EEEECT
T ss_pred cCCC--------ccCE---EEEEeC
Confidence 9987 5664 777774
No 203
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.62 E-value=1.1e-07 Score=70.32 Aligned_cols=68 Identities=13% Similarity=0.028 Sum_probs=49.6
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHh---CCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHH
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQS---KGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTH 110 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~---~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 110 (162)
+++.+|+.|| ++|||+|+.. .|.+++++.+++. .++ .+..|..+. +..+++
T Consensus 137 ~~~~~vv~F~-a~wC~~C~~~-~p~l~~la~~~~~~~~~~v-~~~~vd~~~-----------------------~~~~~~ 190 (243)
T 2hls_A 137 KGRVHIETII-TPSCPYCPYA-VLLAHMFAYEAWKQGNPVI-LSEAVEAYE-----------------------NPDIAD 190 (243)
T ss_dssp CSCEEEEEEE-CSSCSSHHHH-HHHHHHHHHHHHHTTCCCE-EEEEEETTT-----------------------CHHHHH
T ss_pred CCCcEEEEEE-CCCCCCcHHH-HHHHHHHHHHcccccCCcE-EEEEEECcc-----------------------CHHHHH
Confidence 5665566676 8999999998 9999999999853 356 666665431 346788
Q ss_pred HcCCccccccCCCCccceeEEEEEcCCeEE
Q 038822 111 ALGLELDLSEKGLGTQSRRFALLVDDLKVK 140 (162)
Q Consensus 111 ~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~ 140 (162)
.|++. ++|+ +++ +|+++
T Consensus 191 ~~~V~--------~vPt---~~i--~G~~~ 207 (243)
T 2hls_A 191 KYGVM--------SVPS---IAI--NGYLV 207 (243)
T ss_dssp HTTCC--------SSSE---EEE--TTEEE
T ss_pred HcCCe--------eeCe---EEE--CCEEE
Confidence 99987 6773 444 88875
No 204
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.62 E-value=1.8e-07 Score=72.57 Aligned_cols=68 Identities=13% Similarity=0.165 Sum_probs=51.8
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhH-------HHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCc
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPG-------FIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSA 106 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~-------l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~ 106 (162)
++++++|.|| ++||+ |... +|. +.++++++++.++ .+..|..+. +.
T Consensus 27 ~~~~~lV~F~-a~wC~-c~~~-~p~~~~~~~~~~~~a~~~~~~~v-~~~~Vd~~~-----------------------~~ 79 (350)
T 1sji_A 27 KYDVLCLYYH-ESVSS-DKVA-QKQFQLKEIVLELVAQVLEHKDI-GFVMVDAKK-----------------------EA 79 (350)
T ss_dssp TCSEEEEEEE-CCSCS-SSTT-SHHHHHHHHHHHHHHHHGGGSSE-EEEEEETTT-----------------------TH
T ss_pred hCCeEEEEEE-CCCCc-chhh-CchhhhhhHHHHHHHHHHhhcCc-EEEEEeCCC-----------------------CH
Confidence 4567777777 99999 9886 899 7888888776667 777777653 35
Q ss_pred hHHHHcCCccccccCCCCccceeEEEEEcCCeE
Q 038822 107 KYTHALGLELDLSEKGLGTQSRRFALLVDDLKV 139 (162)
Q Consensus 107 ~~~~~~gv~~~~~~~~~~~~~~~~~~ii~~g~i 139 (162)
.++++|++. ++|+ ++++.+|++
T Consensus 80 ~l~~~~~v~--------~~Pt---~~~~~~g~~ 101 (350)
T 1sji_A 80 KLAKKLGFD--------EEGS---LYVLKGDRT 101 (350)
T ss_dssp HHHHHHTCC--------STTE---EEEEETTEE
T ss_pred HHHHhcCCC--------ccce---EEEEECCcE
Confidence 688999997 6675 777788884
No 205
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=98.62 E-value=2.8e-09 Score=73.72 Aligned_cols=92 Identities=8% Similarity=0.060 Sum_probs=55.5
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
.+|+++|.|| ++||++|+.. .|.+.+..+-.+..+. .++.|..|.. ....+..|+
T Consensus 43 ~~KpVlV~F~-A~WC~~Ck~m-~p~~~~~~~~~~~~~~-~fv~V~vD~e----------------------~~~~~~~~~ 97 (151)
T 3ph9_A 43 SKKPLMVIHH-LEDCQYSQAL-KKVFAQNEEIQEMAQN-KFIMLNLMHE----------------------TTDKNLSPD 97 (151)
T ss_dssp HTCCEEEEEC-CTTCHHHHHH-HHHHHHCHHHHHHHHH-TCEEEEESSC----------------------CSCGGGCTT
T ss_pred cCCcEEEEEE-CCCCHhHHHH-HHHHhcCHHHHHHhhc-CeEEEEecCC----------------------chhhHhhcC
Confidence 5888988888 9999999996 8887764221111112 3455555420 011234555
Q ss_pred CccccccCCCCccceeEEEEEc-CCeEEEEEeecCCc----ceeCCHHHHHhc
Q 038822 114 LELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGD----FTVSSADDILKS 161 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~----~~~~~~~~il~~ 161 (162)
+. ++|+ +++++ +|++++...|..++ ..-.+++++|+.
T Consensus 98 v~--------~~PT---~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~ 139 (151)
T 3ph9_A 98 GQ--------YVPR---IMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIEN 139 (151)
T ss_dssp CC--------CSSE---EEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHHH
T ss_pred CC--------CCCE---EEEECCCCCEEEEEeCCcCCcccccchhhHHHHHHH
Confidence 54 5665 88889 99999988775111 122455666553
No 206
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=98.59 E-value=1.5e-08 Score=73.97 Aligned_cols=87 Identities=11% Similarity=0.084 Sum_probs=61.0
Q ss_pred CCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCC
Q 038822 35 GKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGL 114 (162)
Q Consensus 35 gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 114 (162)
++++||.|| ++||+.|... .|.+.++++++. ++ .++.|..+. ..+++.|++
T Consensus 120 ~k~vvV~F~-a~wC~~C~~l-~p~l~~la~~~~--~v-~f~~vd~~~------------------------~~l~~~~~i 170 (217)
T 2trc_P 120 VTTIVVNIY-EDGVRGCDAL-NSSLECLAAEYP--MV-KFCKIRASN------------------------TGAGDRFSS 170 (217)
T ss_dssp TCEEEEEEE-CTTSTTHHHH-HHHHHHHHTTCT--TS-EEEEEEHHH------------------------HTCSTTSCG
T ss_pred CcEEEEEEE-CCCCccHHHH-HHHHHHHHHHCC--Ce-EEEEEECCc------------------------HHHHHHCCC
Confidence 478888888 8999999997 999999998874 57 788777641 123456777
Q ss_pred ccccccCCCCccceeEEEEEcCCeEEEEEeecC----CcceeCCHHHHHhc
Q 038822 115 ELDLSEKGLGTQSRRFALLVDDLKVKAANVESG----GDFTVSSADDILKS 161 (162)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~----~~~~~~~~~~il~~ 161 (162)
. ++|+ ++++.+|+++..+.+.. ..+..++++.+|+.
T Consensus 171 ~--------~~PT---l~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~ 210 (217)
T 2trc_P 171 D--------VLPT---LLVYKGGELISNFISVAEQFAEDFFAADVESFLNE 210 (217)
T ss_dssp G--------GCSE---EEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHT
T ss_pred C--------CCCE---EEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHH
Confidence 6 4563 77778999998887641 12223456666653
No 207
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.57 E-value=1.1e-07 Score=67.13 Aligned_cols=105 Identities=12% Similarity=0.047 Sum_probs=62.4
Q ss_pred eeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhH---HHHhHHHHHhCCCCeEEEEEcCC-HHHHHHHHHhCCCCCceEE
Q 038822 25 QQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPG---FIEKADELQSKGVDEILCISVND-PFVMKAWAKTFPKNKSVKF 100 (162)
Q Consensus 25 ~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~---l~~~~~~~~~~~~~~v~~is~d~-~~~~~~~~~~~~~~~~~~~ 100 (162)
+.+..... +||+++|.|| ++||+.|+.- .+. ..+..+.+.+ ++ .++-|..+. ++....|.+.
T Consensus 30 ea~~~A~~-~~KpVlvdF~-A~WC~~Ck~m-~~~~f~~~~va~~l~~-~f-v~ikVD~de~~~l~~~y~~~--------- 95 (173)
T 3ira_A 30 EAFEKARK-ENKPVFLSIG-YSTCHWCHMM-AHESFEDEEVAGLMNE-AF-VSIKVDREERPDIDNIYMTV--------- 95 (173)
T ss_dssp HHHHHHHH-HTCCEEEEEE-CTTCHHHHHH-HHHTTTCHHHHHHHHH-HC-EEEEEETTTCHHHHHHHHHH---------
T ss_pred HHHHHHHH-hCCCEEEecc-cchhHhhccc-cccccCCHHHHHHHHh-cC-ceeeeCCcccCcHHHHHHHH---------
Confidence 34455553 6899999998 9999999984 442 2344444443 45 666776653 3333333221
Q ss_pred EEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeec--CCcceeCCHHHHHhc
Q 038822 101 LADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVES--GGDFTVSSADDILKS 161 (162)
Q Consensus 101 l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~--~~~~~~~~~~~il~~ 161 (162)
+...+|+. +.|+ +++++ +|++++...+- .+....+...++|++
T Consensus 96 -------~q~~~gv~--------g~Pt---~v~l~~dG~~v~~~ty~p~~~~~~~~~f~~~L~~ 141 (173)
T 3ira_A 96 -------CQIILGRG--------GWPL---NIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPR 141 (173)
T ss_dssp -------HHHHHSCC--------CSSE---EEEECTTSCEEEEESSCCSSCBTTBCCHHHHHHH
T ss_pred -------HHHHcCCC--------CCcc---eeeECCCCCceeeeeeCCCCcCCCCCCHHHHHHH
Confidence 11224665 5664 88888 99999974332 222234667777764
No 208
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=98.57 E-value=4.2e-08 Score=64.98 Aligned_cols=85 Identities=13% Similarity=0.075 Sum_probs=63.1
Q ss_pred CCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCC
Q 038822 35 GKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGL 114 (162)
Q Consensus 35 gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 114 (162)
++++|+.|| ++||++|+.- .|.|.++++++. ++ .++-|..|.. ++.|++
T Consensus 23 ~~~vvv~F~-a~wc~~C~~~-~p~l~~la~~~~--~v-~f~kvd~d~~--------------------------~~~~~v 71 (118)
T 3evi_A 23 DVWVIIHLY-RSSIPMCLLV-NQHLSLLARKFP--ET-KFVKAIVNSC--------------------------IQHYHD 71 (118)
T ss_dssp TCEEEEEEE-CTTSHHHHHH-HHHHHHHHHHCT--TS-EEEEEEGGGT--------------------------STTCCG
T ss_pred CCeEEEEEe-CCCChHHHHH-HHHHHHHHHHCC--CC-EEEEEEhHHh--------------------------HHHCCC
Confidence 347888888 8999999997 999999999875 47 7887777630 256777
Q ss_pred ccccccCCCCccceeEEEEEcCCeEEEEEeec----CCcceeCCHHHHHhc
Q 038822 115 ELDLSEKGLGTQSRRFALLVDDLKVKAANVES----GGDFTVSSADDILKS 161 (162)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~----~~~~~~~~~~~il~~ 161 (162)
. ++|+ .++..+|+++....+. +..++.++++..|.+
T Consensus 72 ~--------~~PT---~~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 72 N--------CLPT---IFVYKNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp G--------GCSE---EEEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred C--------CCCE---EEEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 6 4553 7777899999999984 234455677777654
No 209
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=98.54 E-value=1.2e-07 Score=61.95 Aligned_cols=77 Identities=12% Similarity=0.038 Sum_probs=54.4
Q ss_pred CCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCC
Q 038822 35 GKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGL 114 (162)
Q Consensus 35 gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 114 (162)
+++++++|+ ++|||+|..- .|.+.++.++ .++ .++-|..|..- |-...++.+|||
T Consensus 24 ~~~vvi~kh-atwCgpc~~~-~~~~e~~~~~---~~v-~~~~vdVde~r-------------------~~Sn~IA~~~~V 78 (112)
T 3iv4_A 24 NKYVFVLKH-SETCPISANA-YDQFNKFLYE---RDM-DGYYLIVQQER-------------------DLSDYIAKKTNV 78 (112)
T ss_dssp CSEEEEEEE-CTTCHHHHHH-HHHHHHHHHH---HTC-CEEEEEGGGGH-------------------HHHHHHHHHHTC
T ss_pred CCCEEEEEE-CCcCHhHHHH-HHHHHHHhcc---CCc-eEEEEEeecCc-------------------hhhHHHHHHhCC
Confidence 566666666 9999999996 9999998874 356 56655554210 001448999999
Q ss_pred ccccccCCCCccceeEEEEEcCCeEEEEEeec
Q 038822 115 ELDLSEKGLGTQSRRFALLVDDLKVKAANVES 146 (162)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~ 146 (162)
.- .+| .++++.||++++.....
T Consensus 79 ~h-------~sP---q~il~k~G~~v~~~SH~ 100 (112)
T 3iv4_A 79 KH-------ESP---QAFYFVNGEMVWNRDHG 100 (112)
T ss_dssp CC-------CSS---EEEEEETTEEEEEEEGG
T ss_pred cc-------CCC---eEEEEECCEEEEEeecc
Confidence 72 144 48888999999987753
No 210
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.52 E-value=9.6e-08 Score=75.05 Aligned_cols=72 Identities=10% Similarity=0.092 Sum_probs=54.7
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHh-----CCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchH
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQS-----KGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKY 108 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~-----~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 108 (162)
++++++|.|| ++||+.|... .|.+.++++++++ .++ .+..|..+ .+..+
T Consensus 21 ~~~~vlV~F~-a~wC~~C~~~-~p~~~~~a~~~~~~~~~~~~v-~~~~Vd~~-----------------------~~~~l 74 (382)
T 2r2j_A 21 NADVALVNFY-ADWCRFSQML-HPIFEEASDVIKEEFPNENQV-VFARVDCD-----------------------QHSDI 74 (382)
T ss_dssp HCSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTTCC---CCE-EEEEEETT-----------------------TCHHH
T ss_pred cCCeEEEEEE-CCCCHHHHHH-HHHHHHHHHHHHhhcCCCCce-EEEEEECC-----------------------ccHHH
Confidence 4677778777 9999999997 9999999999963 225 56666543 34678
Q ss_pred HHHcCCccccccCCCCccceeEEEEEcCCeEEEE
Q 038822 109 THALGLELDLSEKGLGTQSRRFALLVDDLKVKAA 142 (162)
Q Consensus 109 ~~~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~ 142 (162)
++.|++. ++|+ +++..+|+++..
T Consensus 75 ~~~~~v~--------~~Pt---~~~f~~G~~~~~ 97 (382)
T 2r2j_A 75 AQRYRIS--------KYPT---LKLFRNGMMMKR 97 (382)
T ss_dssp HHHTTCC--------EESE---EEEEETTEEEEE
T ss_pred HHhcCCC--------cCCE---EEEEeCCcEeee
Confidence 9999997 5664 666779988764
No 211
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.50 E-value=7.1e-08 Score=78.24 Aligned_cols=75 Identities=13% Similarity=0.202 Sum_probs=57.9
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++++|.|| ++||+.|+.. .|.+.++++++++.++ .++.|..+. +..++++||
T Consensus 30 ~~~~~lv~F~-a~wC~~C~~~-~p~~~~~a~~~~~~~v-~~~~vd~~~-----------------------~~~l~~~~~ 83 (504)
T 2b5e_A 30 SHDLVLAEFF-APWCGHCKNM-APEYVKAAETLVEKNI-TLAQIDCTE-----------------------NQDLCMEHN 83 (504)
T ss_dssp TCSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTTTTC-EEEEEETTT-----------------------CHHHHHHTT
T ss_pred cCCeEEEEEE-CCCCHHHHHh-HHHHHHHHHHhccCCe-EEEEEECCC-----------------------CHHHHHhcC
Confidence 4677777777 8999999997 9999999999987678 788887542 356899999
Q ss_pred CccccccCCCCccceeEEEEEcCCeE--EEEEee
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKV--KAANVE 145 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i--~~~~~~ 145 (162)
+. ++|+ .+++++|++ +..+.|
T Consensus 84 v~--------~~Pt---~~~~~~g~~~~~~~~~G 106 (504)
T 2b5e_A 84 IP--------GFPS---LKIFKNSDVNNSIDYEG 106 (504)
T ss_dssp CC--------SSSE---EEEEETTCTTCEEECCS
T ss_pred CC--------cCCE---EEEEeCCccccceeecC
Confidence 97 6664 777788875 554443
No 212
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.45 E-value=4.9e-08 Score=71.03 Aligned_cols=86 Identities=13% Similarity=0.067 Sum_probs=52.4
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC-----CH---------------HHHHHHHHhCC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN-----DP---------------FVMKAWAKTFP 93 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d-----~~---------------~~~~~~~~~~~ 93 (162)
+++.+|+.|| ..|||+|++. .+.+.++.+ .++ .++.+... +. ....+++...+
T Consensus 85 ~~k~~vv~F~-d~~Cp~C~~~-~~~l~~l~~----~~v-~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~ 157 (216)
T 1eej_A 85 QEKHVITVFT-DITCGYCHKL-HEQMADYNA----LGI-TVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKS 157 (216)
T ss_dssp TCCEEEEEEE-CTTCHHHHHH-HTTHHHHHH----TTE-EEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCC
T ss_pred CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHh----CCc-EEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCC
Confidence 5667777777 8999999997 899887754 367 77665431 11 11222333333
Q ss_pred CCC-ceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEcCCe
Q 038822 94 KNK-SVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVDDLK 138 (162)
Q Consensus 94 ~~~-~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~~g~ 138 (162)
+.. ......|.+.++++.||+. |+| ++++.||+
T Consensus 158 ~~~~~~~~~v~~~~~l~~~~gV~--------gtP----t~v~~dG~ 191 (216)
T 1eej_A 158 VAPASCDVDIADHYALGVQLGVS--------GTP----AVVLSNGT 191 (216)
T ss_dssp CCCCCCSCCHHHHHHHHHHHTCC--------SSS----EEECTTSC
T ss_pred CChhHHHHHHHHHHHHHHHcCCC--------ccC----EEEEcCCe
Confidence 200 1122334557789999997 777 55676774
No 213
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.40 E-value=2.3e-07 Score=74.69 Aligned_cols=73 Identities=11% Similarity=0.113 Sum_probs=56.7
Q ss_pred CeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCc
Q 038822 36 KKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLE 115 (162)
Q Consensus 36 k~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 115 (162)
++++|.|| ++||+.|+.. .|.+.++++++++. + .+..|..+. +..+++.||+.
T Consensus 22 ~~~lv~F~-a~wC~~C~~~-~p~~~~~a~~~~~~-v-~~~~vd~~~-----------------------~~~l~~~~~v~ 74 (481)
T 3f8u_A 22 GLMLVEFF-APWCGHAKRL-APEYEAAATRLKGI-V-PLAKVDCTA-----------------------NTNTCNKYGVS 74 (481)
T ss_dssp SEEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTTT-C-CEEEEETTT-----------------------CHHHHHHTTCC
T ss_pred CeEEEEEE-CCCCHHHHHh-HHHHHHHHHHhcCc-e-EEEEEECCC-----------------------CHHHHHhcCCC
Confidence 67777777 9999999997 99999999998765 6 777777653 35688999997
Q ss_pred cccccCCCCccceeEEEEEcCCeEEEEEeec
Q 038822 116 LDLSEKGLGTQSRRFALLVDDLKVKAANVES 146 (162)
Q Consensus 116 ~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~ 146 (162)
++|+ .++..+|+++..+.|.
T Consensus 75 --------~~Pt---l~~~~~g~~~~~~~G~ 94 (481)
T 3f8u_A 75 --------GYPT---LKIFRDGEEAGAYDGP 94 (481)
T ss_dssp --------EESE---EEEEETTEEEEECCSC
T ss_pred --------CCCE---EEEEeCCceeeeecCc
Confidence 5663 6677799877666543
No 214
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.35 E-value=1.2e-07 Score=66.34 Aligned_cols=49 Identities=10% Similarity=0.057 Sum_probs=34.7
Q ss_pred CceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEE
Q 038822 23 QLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCI 77 (162)
Q Consensus 23 ~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~i 77 (162)
++....+.+- .++.+|+.|| ..|||+|... .+.+.++.+++.+ + .++..
T Consensus 11 ~~~~~~~G~~-~a~v~i~~f~-d~~Cp~C~~~-~~~l~~l~~~~~~--v-~~~~~ 59 (175)
T 3gyk_A 11 DPNAPVLGNP-EGDVTVVEFF-DYNCPYCRRA-MAEVQGLVDADPN--V-RLVYR 59 (175)
T ss_dssp CTTSCEEECT-TCSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHCTT--E-EEEEE
T ss_pred CCCCCCcCCC-CCCEEEEEEE-CCCCccHHHH-HHHHHHHHHhCCC--E-EEEEE
Confidence 3445566664 6776666666 8999999997 8999998887543 4 45443
No 215
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.35 E-value=3e-07 Score=78.24 Aligned_cols=76 Identities=4% Similarity=0.076 Sum_probs=58.4
Q ss_pred hhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchH
Q 038822 29 VHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKY 108 (162)
Q Consensus 29 l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 108 (162)
++++ .+++++|.|| ++||+.|... +|.+.++++++++ ++ .++.|..+. +..+
T Consensus 450 ~~~~-~~~~vlv~F~-a~wC~~c~~~-~p~~~~~a~~~~~-~v-~~~~vd~~~-----------------------~~~~ 501 (780)
T 3apo_A 450 FPAS-DKEPWLVDFF-APWSPPSRAL-LPELRKASTLLYG-QL-KVGTLDCTI-----------------------HEGL 501 (780)
T ss_dssp SCTT-CCSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTT-TC-EEEEEETTT-----------------------CHHH
T ss_pred HHHc-CCCeEEEEEE-CCCCHHHHHH-hHHHHHHHHHhcC-Ce-EEEEEeCCC-----------------------CHHH
Confidence 4444 6888888888 8999999997 9999999999974 47 788887653 1347
Q ss_pred HHHcCCccccccCCCCccceeEEEEEcCCeEEEEEe
Q 038822 109 THALGLELDLSEKGLGTQSRRFALLVDDLKVKAANV 144 (162)
Q Consensus 109 ~~~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~ 144 (162)
++.||+. +.|+ ++++++|++ +.+.
T Consensus 502 ~~~~~v~--------~~Pt---~~~~~~g~~-~~~~ 525 (780)
T 3apo_A 502 CNMYNIQ--------AYPT---TVVFNQSSI-HEYE 525 (780)
T ss_dssp HHHTTCC--------SSSE---EEEEETTEE-EEEC
T ss_pred HHHcCCC--------cCCe---EEEEcCCce-eeec
Confidence 8889987 5664 777788877 5444
No 216
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.33 E-value=9.7e-08 Score=76.94 Aligned_cols=44 Identities=16% Similarity=0.258 Sum_probs=35.4
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhC-CCCeEEEEEcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSK-GVDEILCISVN 80 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~-~~~~v~~is~d 80 (162)
.+++++|.|| ++||++|+.. .|.+.++++++++. ++ .++.|..+
T Consensus 369 ~~k~vlv~f~-a~wC~~C~~~-~p~~~~l~~~~~~~~~v-~~~~id~~ 413 (481)
T 3f8u_A 369 ENKDVLIEFY-APWCGHCKNL-EPKYKELGEKLSKDPNI-VIAKMDAT 413 (481)
T ss_dssp TTCEEEEEEE-CTTBHHHHHH-HHHHHHHHHHTTTCSSE-EEEEEETT
T ss_pred CCCcEEEEEe-cCcChhHHHh-hHHHHHHHHHhccCCCE-EEEEEECC
Confidence 4788888888 9999999998 99999999999764 45 55555553
No 217
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.29 E-value=5e-07 Score=65.71 Aligned_cols=69 Identities=13% Similarity=0.053 Sum_probs=48.3
Q ss_pred CCeE-EEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 35 GKKV-ILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 35 gk~v-vl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
++++ ++.|| ++|||.|+.. .+.+.+++.++ .++ .++.|..+. +..+++.|+
T Consensus 135 ~~~~~~v~F~-a~wC~~C~~~-~~~~~~~~~~~--~~v-~~~~vd~~~-----------------------~~~l~~~~~ 186 (229)
T 2ywm_A 135 DIPIEIWVFV-TTSCGYCPSA-AVMAWDFALAN--DYI-TSKVIDASE-----------------------NQDLAEQFQ 186 (229)
T ss_dssp CSCEEEEEEE-CTTCTTHHHH-HHHHHHHHHHC--TTE-EEEEEEGGG-----------------------CHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCcchHHH-HHHHHHHHHHC--CCe-EEEEEECCC-----------------------CHHHHHHcC
Confidence 3455 55566 8999999997 99999998887 256 677776542 356889999
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEee
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVE 145 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~ 145 (162)
+. ++|+ +++ +|++ ..+.+
T Consensus 187 v~--------~~Pt---~~~--~G~~-~~~~G 204 (229)
T 2ywm_A 187 VV--------GVPK---IVI--NKGV-AEFVG 204 (229)
T ss_dssp CC--------SSSE---EEE--GGGT-EEEES
T ss_pred Cc--------ccCE---EEE--CCEE-EEeeC
Confidence 87 6773 444 7774 33444
No 218
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.26 E-value=2.1e-07 Score=79.16 Aligned_cols=74 Identities=12% Similarity=0.039 Sum_probs=57.1
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALG 113 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
.+++++|.|| ++||+.|+.. .|.+.++++++++ ++ .++.|..+. +..+++.||
T Consensus 674 ~~~~v~v~F~-a~wC~~C~~~-~p~~~~la~~~~~-~~-~~~~vd~~~-----------------------~~~~~~~~~ 726 (780)
T 3apo_A 674 GKTHWVVDFY-APWSGPSQNF-APEFELLARMIKG-KV-RAGKVDCQA-----------------------YPQTCQKAG 726 (780)
T ss_dssp CSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTT-TC-EEEEEETTT-----------------------CHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCHHHHHH-HHHHHHHHHHhcC-Cc-eEEEEECCC-----------------------CHHHHHhcC
Confidence 4677888888 8999999997 9999999999875 47 788877642 245788899
Q ss_pred CccccccCCCCccceeEEEEEcCCeEEEEEee
Q 038822 114 LELDLSEKGLGTQSRRFALLVDDLKVKAANVE 145 (162)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~ 145 (162)
+. ++|+ ++++++|+++..+.+
T Consensus 727 v~--------~~Pt---~~~~~~g~~~~~~~G 747 (780)
T 3apo_A 727 IK--------AYPS---VKLYQYERAKKSIWE 747 (780)
T ss_dssp CC--------SSSE---EEEEEEETTTTEEEE
T ss_pred CC--------cCCE---EEEEcCCCccccccC
Confidence 86 5664 777788877655554
No 219
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.16 E-value=2.4e-06 Score=60.61 Aligned_cols=42 Identities=24% Similarity=0.229 Sum_probs=30.6
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEc
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISV 79 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~ 79 (162)
.++.+|+.|| ..|||+|... .+.+.++.+++.. .+ .+..+..
T Consensus 21 ~~~~~i~~f~-d~~Cp~C~~~-~~~l~~l~~~~~~-~v-~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFF-GYFCVHCHHF-DPLLLKLGKALPS-DA-YLRTEHV 62 (195)
T ss_dssp SSSEEEEEEE-CTTSCCTTSS-CHHHHHHHHHSCT-TE-EEEEEEC
T ss_pred CCCcEEEEEE-CCCChhHHHH-hHHHHHHHHHCCC-ce-EEEEecc
Confidence 3565666666 8999999997 8999998887754 45 5655543
No 220
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.13 E-value=8.4e-07 Score=63.08 Aligned_cols=43 Identities=19% Similarity=0.176 Sum_probs=32.7
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN 80 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d 80 (162)
.++.+|+.|| ..|||.|... .+.+.++.+++.+ ++ .+.-+..+
T Consensus 24 ~~~~~vv~f~-d~~Cp~C~~~-~~~l~~l~~~~~~-~v-~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFF-AYTCPHCAAI-EPMVEDWAKTAPQ-DV-VLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEE-CTTCHHHHHH-HHHHHHHHHTCCT-TE-EEEEEECC
T ss_pred CCCeEEEEEE-CCCCccHHHh-hHHHHHHHHHCCC-Ce-EEEEEecc
Confidence 4676777777 8999999997 8999988887765 46 66666553
No 221
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.12 E-value=3.5e-07 Score=64.96 Aligned_cols=41 Identities=17% Similarity=0.205 Sum_probs=29.7
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEE
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCIS 78 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is 78 (162)
.++.+|+.|| ..|||+|... .+.+.++.+++.+ .+ .+.-+.
T Consensus 24 ~~~~~i~~f~-d~~Cp~C~~~-~~~l~~l~~~~~~-~v-~~~~~p 64 (192)
T 3h93_A 24 PGKIEVVELF-WYGCPHCYAF-EPTIVPWSEKLPA-DV-HFVRLP 64 (192)
T ss_dssp TTSEEEEEEE-CTTCHHHHHH-HHHHHHHHHTCCT-TE-EEEEEE
T ss_pred CCCCEEEEEE-CCCChhHHHh-hHHHHHHHHhCCC-Ce-EEEEEe
Confidence 4666666666 8999999997 8989888877654 45 454443
No 222
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=98.10 E-value=1.4e-06 Score=70.22 Aligned_cols=64 Identities=11% Similarity=0.078 Sum_probs=48.5
Q ss_pred CCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhC-C------CCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCch
Q 038822 35 GKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSK-G------VDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAK 107 (162)
Q Consensus 35 gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~-~------~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~ 107 (162)
++++||.|| ++||++|+.. .|.+.++++++++. + + .++.|..+. +..
T Consensus 42 ~k~VlV~Fy-A~WC~pCk~~-~P~l~~la~~~~~~~g~~~~~~v-~f~~VD~d~-----------------------~~~ 95 (470)
T 3qcp_A 42 LCPWIVLFY-NDGCGACRRY-ASTFSKFAGGLKVEHGKDALQIA-TAAAVNCAS-----------------------EVD 95 (470)
T ss_dssp GSCEEEEEE-CTTCHHHHHH-HHHHHHHHHTSCCSSCSSGGGGC-EEEEEETTT-----------------------CHH
T ss_pred CCeEEEEEE-CCCCHHHHHH-HHHHHHHHHHHhhhcccccCceE-EEEEEECCC-----------------------CHH
Confidence 467888888 9999999998 99999999998633 2 6 777777652 346
Q ss_pred HHHHcCCccccccCCCCccceeEEEEEc
Q 038822 108 YTHALGLELDLSEKGLGTQSRRFALLVD 135 (162)
Q Consensus 108 ~~~~~gv~~~~~~~~~~~~~~~~~~ii~ 135 (162)
++++|+|. ++|+ +++++
T Consensus 96 la~~y~V~--------~~PT---lilf~ 112 (470)
T 3qcp_A 96 LCRKYDIN--------FVPR---LFFFY 112 (470)
T ss_dssp HHHHTTCC--------SSCE---EEEEE
T ss_pred HHHHcCCC--------ccCe---EEEEE
Confidence 78888886 5554 66665
No 223
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.10 E-value=7.1e-07 Score=69.26 Aligned_cols=43 Identities=12% Similarity=0.151 Sum_probs=33.3
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhC-CCCeEEEEEc
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSK-GVDEILCISV 79 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~-~~~~v~~is~ 79 (162)
.++.++|.|| ++||+.|+.. .|.+.++++++++. ++ .++.|..
T Consensus 266 ~~k~~lv~f~-a~wC~~C~~~-~p~~~~la~~~~~~~~v-~~~~vd~ 309 (361)
T 3uem_A 266 EKKNVFVEFY-APWCGHCKQL-APIWDKLGETYKDHENI-VIAKMDS 309 (361)
T ss_dssp TTCEEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTTCSSE-EEEEEET
T ss_pred CCCcEEEEEe-cCcCHhHHHH-HHHHHHHHHHhccCCcE-EEEEEEC
Confidence 5677888887 9999999997 99999999999764 34 4444433
No 224
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=98.09 E-value=3.4e-07 Score=60.35 Aligned_cols=81 Identities=10% Similarity=-0.016 Sum_probs=47.0
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHH-HhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHc
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADEL-QSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHAL 112 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~-~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~ 112 (162)
+.+.++|.|| +.||+.|..- -+.+...++.. +.+.+ .++-|..+.. ....++..|
T Consensus 17 ~~~~~LV~F~-A~wC~~Ck~~-~~~i~~~~~~~a~~~~~-~l~~vdv~~~---------------------~~~~la~~~ 72 (116)
T 3dml_A 17 KAELRLLMFE-QPGCLYCARW-DAEIAPQYPLTDEGRAA-PVQRLQMRDP---------------------LPPGLELAR 72 (116)
T ss_dssp --CEEEEEEE-CTTCHHHHHH-HHHTTTTGGGSHHHHHS-CEEEEETTSC---------------------CCTTCBCSS
T ss_pred cCCCEEEEEE-CCCCHHHHHH-HHHHHhhHHHhhhcccc-eEEEEECCCC---------------------CchhHHHHC
Confidence 3456777777 8999999983 33332222111 01124 4555555431 113455677
Q ss_pred CCccccccCCCCccceeEEEEEcCCeEEEEEeecCCc
Q 038822 113 GLELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGD 149 (162)
Q Consensus 113 gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~ 149 (162)
++. ++|+ ++++++|+.+....|..+.
T Consensus 73 ~V~--------g~PT---~i~f~~G~ev~Ri~G~~~~ 98 (116)
T 3dml_A 73 PVT--------FTPT---FVLMAGDVESGRLEGYPGE 98 (116)
T ss_dssp CCC--------SSSE---EEEEETTEEEEEEECCCCH
T ss_pred CCC--------CCCE---EEEEECCEEEeeecCCCCH
Confidence 775 5664 7777899999988776443
No 225
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.00 E-value=1.3e-05 Score=62.65 Aligned_cols=69 Identities=17% Similarity=0.081 Sum_probs=48.2
Q ss_pred CCeEEEEEeeCCCCCCCCcCCH------hHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchH
Q 038822 35 GKKVILFGVPGDFTPTCSLKHV------PGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKY 108 (162)
Q Consensus 35 gk~vvl~f~~~~~cp~C~~~~~------~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 108 (162)
++.++|.|| +.||+.|... - |.+.+.++.++..++ .+..|..+. +..+
T Consensus 30 ~~~vlV~Fy-ApWC~~~~~~-~~l~~~~p~~e~~a~~~~~~~v-~~~~Vd~~~-----------------------~~~l 83 (367)
T 3us3_A 30 YEVLALLYH-EPPEDDKASQ-RQFEMEELILELAAQVLEDKGV-GFGLVDSEK-----------------------DAAV 83 (367)
T ss_dssp CSEEEEEEE-CCCCSSHHHH-HHHHHHHHHHHHHHHHHTTTTE-EEEEEETTT-----------------------THHH
T ss_pred CCeEEEEEE-CCCchhHHHh-hhhccccHHHHHHHHHhhcCCc-eEEEEeCcc-----------------------cHHH
Confidence 566777777 9999998442 1 367777777765556 666666642 3468
Q ss_pred HHHcCCccccccCCCCccceeEEEEEcCCeEE
Q 038822 109 THALGLELDLSEKGLGTQSRRFALLVDDLKVK 140 (162)
Q Consensus 109 ~~~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~ 140 (162)
+++|||. ++|+ .++..+|+++
T Consensus 84 ~~~~~V~--------~~PT---l~~f~~G~~~ 104 (367)
T 3us3_A 84 AKKLGLT--------EEDS---IYVFKEDEVI 104 (367)
T ss_dssp HHHHTCC--------STTE---EEEEETTEEE
T ss_pred HHHcCCC--------cCce---EEEEECCcEE
Confidence 9999997 6774 7777788864
No 226
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=97.99 E-value=8.4e-07 Score=71.92 Aligned_cols=43 Identities=21% Similarity=0.286 Sum_probs=34.2
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhC--CCCeEEEEEc
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSK--GVDEILCISV 79 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~--~~~~v~~is~ 79 (162)
.+++++|.|| ++||++|+.. .|.+.+++++++.. ++ .++.|..
T Consensus 375 ~~k~vlv~F~-a~wC~~C~~~-~p~~~~l~~~~~~~~~~v-~~~~vd~ 419 (504)
T 2b5e_A 375 PKKDVLVLYY-APWCGHCKRL-APTYQELADTYANATSDV-LIAKLDH 419 (504)
T ss_dssp TTCCEEEEEE-CTTCHHHHHH-HHHHHHHHHHHHHHCSSC-EEEEEEG
T ss_pred CCCCEEEEEE-CCCChhHHHH-hHHHHHHHHHhhccCCcE-EEEEecC
Confidence 4788888888 8999999998 99999999999732 44 4555554
No 227
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=97.94 E-value=1.7e-06 Score=56.18 Aligned_cols=91 Identities=9% Similarity=0.004 Sum_probs=49.8
Q ss_pred hhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHH
Q 038822 31 SLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTH 110 (162)
Q Consensus 31 ~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 110 (162)
+..+++++++ || ++|||+|+.. .+.|.++. ..+ .++-|..+... ... ...+.+
T Consensus 15 ~~~~~~~vv~-f~-a~~C~~C~~~-~~~l~~~~-----~~~-~~v~v~~~~~~--~~~----------------~~~l~~ 67 (116)
T 2e7p_A 15 ELASSAPVVV-FS-KTYCGYCNRV-KQLLTQVG-----ASY-KVVELDELSDG--SQL----------------QSALAH 67 (116)
T ss_dssp HHHTSSSEEE-EE-CTTCHHHHHH-HHHHHHHT-----CCC-EEEEGGGSTTH--HHH----------------HHHHHH
T ss_pred HHHcCCCEEE-EE-CCCChhHHHH-HHHHHHcC-----CCe-EEEEccCCCCh--HHH----------------HHHHHH
Confidence 3345666655 66 8999999997 88777653 223 34333332210 000 135778
Q ss_pred HcCCccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 111 ALGLELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 111 ~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
.||+. ++|+ + + .+|+++..+.+..+.....++.++|+.
T Consensus 68 ~~~v~--------~~Pt---~-~-~~g~~v~~~~~~~~~~~~~~l~~~l~~ 105 (116)
T 2e7p_A 68 WTGRG--------TVPN---V-F-IGGKQIGGCDTVVEKHQRNELLPLLQD 105 (116)
T ss_dssp HHSCC--------SSCE---E-E-ETTEEEECHHHHHHHHHTTCHHHHHHH
T ss_pred HhCCC--------CcCE---E-E-ECCEEECChHHHHHHHhCChHHHHHHH
Confidence 88886 5663 3 3 378776654432211123567766654
No 228
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=97.92 E-value=3.8e-05 Score=52.92 Aligned_cols=73 Identities=7% Similarity=-0.020 Sum_probs=44.3
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhH-H---HHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHH
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPG-F---IEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYT 109 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~-l---~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 109 (162)
.+|+++|.|+ ++||+.|+. |.+ . .+..+.++ .++ .++-+..++++ +..+.
T Consensus 41 ~~K~vlvd~~-a~wC~~C~~--me~~vf~d~~V~~~l~-~~f-v~v~~d~~~~~---------------------~~~l~ 94 (153)
T 2dlx_A 41 QNKWLMINIQ-NVQDFACQC--LNRDVWSNEAVKNIIR-EHF-IFWQVYHDSEE---------------------GQRYI 94 (153)
T ss_dssp HTCEEEEEEE-CSCTTTHHH--HHHHTTTCHHHHHHHH-HTE-EEEEEESSSHH---------------------HHHHH
T ss_pred cCCeEEEEEE-CCCCHhHHH--HHHHhcCCHHHHHHHH-cCe-EEEEEecCCHh---------------------HHHHH
Confidence 3788888888 899999988 322 1 12223332 245 56666665432 13355
Q ss_pred HHcCCccccccCCCCccceeEEEEEc-C-CeEEEEE
Q 038822 110 HALGLELDLSEKGLGTQSRRFALLVD-D-LKVKAAN 143 (162)
Q Consensus 110 ~~~gv~~~~~~~~~~~~~~~~~~ii~-~-g~i~~~~ 143 (162)
+.|++. +.|+ ++++| + |+.+...
T Consensus 95 ~~y~v~--------~~P~---~~fld~~~G~~l~~~ 119 (153)
T 2dlx_A 95 QFYKLG--------DFPY---VSILDPRTGQKLVEW 119 (153)
T ss_dssp HHHTCC--------SSSE---EEEECTTTCCCCEEE
T ss_pred HHcCCC--------CCCE---EEEEeCCCCcEeeec
Confidence 678875 5554 77777 7 8665554
No 229
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=97.85 E-value=2.7e-06 Score=61.53 Aligned_cols=36 Identities=19% Similarity=0.204 Sum_probs=25.5
Q ss_pred CCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEE
Q 038822 35 GKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCI 77 (162)
Q Consensus 35 gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~i 77 (162)
++.+|+.|+ ..|||+|++. .+.+.++.+ .++ .+..+
T Consensus 86 ~k~~vv~F~-d~~Cp~C~~~-~~~l~~~~~----~~v-~v~~~ 121 (211)
T 1t3b_A 86 EKHVVTVFM-DITCHYCHLL-HQQLKEYND----LGI-TVRYL 121 (211)
T ss_dssp CSEEEEEEE-CTTCHHHHHH-HTTHHHHHH----TTE-EEEEE
T ss_pred CCEEEEEEE-CCCCHhHHHH-HHHHHHHHh----CCc-EEEEE
Confidence 455666666 8999999997 888877543 356 66544
No 230
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=97.83 E-value=2.9e-05 Score=54.84 Aligned_cols=32 Identities=19% Similarity=0.080 Sum_probs=26.5
Q ss_pred CCeEEEEEeeC------CCCCCCCcCCHhHHHHhHHHHH
Q 038822 35 GKKVILFGVPG------DFTPTCSLKHVPGFIEKADELQ 67 (162)
Q Consensus 35 gk~vvl~f~~~------~~cp~C~~~~~~~l~~~~~~~~ 67 (162)
+.++||.||.. .||++|+.- .|.+.++++++.
T Consensus 37 ~~~vvV~F~A~~~~~~~~wCgpCk~l-~P~~e~lA~~~~ 74 (178)
T 3ga4_A 37 GYFNILYITMRGTNSNGMSCQLCHDF-EKTYHAVADVIR 74 (178)
T ss_dssp TCEEEEEEECCSBCTTSCBCHHHHHH-HHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCCCCCCChhHHHH-HHHHHHHHHHhh
Confidence 45678877741 599999997 999999999997
No 231
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=97.76 E-value=3.7e-05 Score=55.46 Aligned_cols=67 Identities=10% Similarity=0.113 Sum_probs=43.1
Q ss_pred CeEEEEEeeCC-CCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCC
Q 038822 36 KKVILFGVPGD-FTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGL 114 (162)
Q Consensus 36 k~vvl~f~~~~-~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 114 (162)
++++|.+|.+. ||+.|..- .+.+.++.+. ...+ .+..|..+.++ +..+++.||+
T Consensus 22 ~~v~lv~f~~~~~C~~C~~~-~~~~~~la~~--~~~v-~~~~vd~~~~~---------------------~~~~~~~~~v 76 (226)
T 1a8l_A 22 NPVKLIVFVRKDHCQYCDQL-KQLVQELSEL--TDKL-SYEIVDFDTPE---------------------GKELAKRYRI 76 (226)
T ss_dssp SCEEEEEEECSSSCTTHHHH-HHHHHHHHTT--CTTE-EEEEEETTSHH---------------------HHHHHHHTTC
T ss_pred CCeEEEEEecCCCCchhHHH-HHHHHHHHhh--CCce-EEEEEeCCCcc---------------------cHHHHHHcCC
Confidence 44554445588 99999996 8888887643 2235 66666655432 2457788888
Q ss_pred ccccccCCCCccceeEEEEEcCCe
Q 038822 115 ELDLSEKGLGTQSRRFALLVDDLK 138 (162)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~ii~~g~ 138 (162)
. ++|+ .++.++|+
T Consensus 77 ~--------~~Pt---~~~~~~g~ 89 (226)
T 1a8l_A 77 D--------RAPA---TTITQDGK 89 (226)
T ss_dssp C--------SSSE---EEEEETTB
T ss_pred C--------cCce---EEEEcCCc
Confidence 6 4563 55556664
No 232
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.74 E-value=3.7e-05 Score=53.47 Aligned_cols=51 Identities=10% Similarity=-0.038 Sum_probs=34.8
Q ss_pred eeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhC-CCCeEEEEEc
Q 038822 25 QQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSK-GVDEILCISV 79 (162)
Q Consensus 25 ~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~-~~~~v~~is~ 79 (162)
..+.+.+- .++.+|+.|+ ..+||+|... .+.+.++.+++.+. ++ .++....
T Consensus 18 ~~~~~G~~-~a~v~i~~f~-D~~Cp~C~~~-~~~~~~~~~~~~~~~~v-~~~~~~~ 69 (175)
T 1z6m_A 18 TGLHIGES-NAPVKMIEFI-NVRCPYCRKW-FEESEELLAQSVKSGKV-ERIIKLF 69 (175)
T ss_dssp SSEEESCT-TCSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHHHTTSE-EEEEEEC
T ss_pred CCcccCCC-CCCeEEEEEE-CCCCcchHHH-HHHHHHHHHHHhhCCcE-EEEEEeC
Confidence 44566664 5665555555 8899999996 89999988888433 36 6665443
No 233
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.74 E-value=2.2e-05 Score=57.91 Aligned_cols=39 Identities=13% Similarity=0.118 Sum_probs=26.0
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEE
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCIS 78 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is 78 (162)
.++.+|+.|+ ..|||+|.+. .+.+.++.++ .++ .|..+.
T Consensus 96 ~ak~~v~~F~-D~~Cp~C~~~-~~~l~~~~~~---g~v-~v~~~~ 134 (241)
T 1v58_A 96 DAPVIVYVFA-DPFCPYCKQF-WQQARPWVDS---GKV-QLRTLL 134 (241)
T ss_dssp TCSEEEEEEE-CTTCHHHHHH-HHHHHHHHHT---TSE-EEEEEE
T ss_pred CCCeEEEEEE-CCCChhHHHH-HHHHHHHHhC---CcE-EEEEEE
Confidence 3454555555 8999999997 7888776543 346 665443
No 234
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=97.63 E-value=4.6e-05 Score=55.17 Aligned_cols=76 Identities=11% Similarity=0.018 Sum_probs=47.5
Q ss_pred CCeEEEEEee----CCCCCCCCcCCHhHHHHhHHHHHh-CCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHH
Q 038822 35 GKKVILFGVP----GDFTPTCSLKHVPGFIEKADELQS-KGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYT 109 (162)
Q Consensus 35 gk~vvl~f~~----~~~cp~C~~~~~~~l~~~~~~~~~-~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 109 (162)
.++++|.||. +.||+.|..- ++.+.++++++.+ ..+ .+..|.. |.+.+++
T Consensus 20 ~~~v~v~~~~~~~~~~~C~~c~~~-~~~~~~~a~~~~~~~~v-~~~~vd~-----------------------~~~~~l~ 74 (229)
T 2ywm_A 20 KEPVSIKLFSQAIGCESCQTAEEL-LKETVEVIGEAVGQDKI-KLDIYSP-----------------------FTHKEET 74 (229)
T ss_dssp CSCEEEEEECCCTTCGGGGHHHHH-HHHHHHHHHHHHCTTTE-EEEEECT-----------------------TTCHHHH
T ss_pred cCCeEEEEEccCCCCcccHHHHHH-HHHHHHHHhccCCCCce-EEEEecC-----------------------cccHHHH
Confidence 4667777773 5566666775 7777777777743 234 4444422 2357789
Q ss_pred HHcCCccccccCCCCccceeEEEEEcCCeEEEEEeec
Q 038822 110 HALGLELDLSEKGLGTQSRRFALLVDDLKVKAANVES 146 (162)
Q Consensus 110 ~~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~ 146 (162)
++||+. ++|+ .++.++|+....+.+.
T Consensus 75 ~~~~v~--------~~Pt---l~~~~~~~~~~~~~G~ 100 (229)
T 2ywm_A 75 EKYGVD--------RVPT---IVIEGDKDYGIRYIGL 100 (229)
T ss_dssp HHTTCC--------BSSE---EEEESSSCCCEEEESC
T ss_pred HHcCCC--------cCcE---EEEECCCcccceecCC
Confidence 999997 5664 6666666555555554
No 235
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.49 E-value=3.9e-05 Score=54.06 Aligned_cols=40 Identities=15% Similarity=0.133 Sum_probs=28.1
Q ss_pred CCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEE
Q 038822 35 GKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCIS 78 (162)
Q Consensus 35 gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is 78 (162)
++.+|+.|| ..+||+|... .+.+.++.+++.. .+ .+..+.
T Consensus 25 a~v~i~~f~-d~~Cp~C~~~-~~~l~~l~~~~~~-~v-~~~~~p 64 (193)
T 2rem_A 25 GKIEVVEIF-GYTCPHCAHF-DSKLQAWGARQAK-DV-RFTLVP 64 (193)
T ss_dssp TCEEEEEEE-CTTCHHHHHH-HHHHHHHHHTSCT-TE-EEEEEE
T ss_pred CCeEEEEEE-CCCChhHhhh-hHHHHHHHHhcCC-ce-EEEEeC
Confidence 444555555 8999999997 8999888877653 45 555444
No 236
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=97.45 E-value=8.4e-05 Score=44.97 Aligned_cols=64 Identities=13% Similarity=0.106 Sum_probs=40.1
Q ss_pred EEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEc-CCchHHHHcCCccc
Q 038822 39 ILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLAD-GSAKYTHALGLELD 117 (162)
Q Consensus 39 vl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D-~~~~~~~~~gv~~~ 117 (162)
+..|+ ++|||.|... .+.+.++.++ .+. .+-.+..+. | .+.++++.||+.
T Consensus 4 ~~~f~-~~~C~~C~~~-~~~l~~~~~~---~~~-~~~~~~v~~---------------------~~~~~~~~~~~gv~-- 54 (80)
T 2k8s_A 4 KAIFY-HAGCPVCVSA-EQAVANAIDP---SKY-TVEIVHLGT---------------------DKARIAEAEKAGVK-- 54 (80)
T ss_dssp EEEEE-ECSCHHHHHH-HHHHHHHSCT---TTE-EEEEEETTT---------------------CSSTHHHHHHHTCC--
T ss_pred eEEEe-CCCCCchHHH-HHHHHHHHHh---cCC-eEEEEEecC---------------------ChhhHHHHHHcCCC--
Confidence 34444 7899999996 7777766533 344 454555542 1 235677888886
Q ss_pred cccCCCCccceeEEEEEcCCeEEEE
Q 038822 118 LSEKGLGTQSRRFALLVDDLKVKAA 142 (162)
Q Consensus 118 ~~~~~~~~~~~~~~~ii~~g~i~~~ 142 (162)
++| ++++ ||++++.
T Consensus 55 ------~vP----t~~i-~g~~~~~ 68 (80)
T 2k8s_A 55 ------SVP----ALVI-DGAAFHI 68 (80)
T ss_dssp ------EEE----EEEE-TTEEEEE
T ss_pred ------cCC----EEEE-CCEEEEe
Confidence 455 3444 8887754
No 237
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.37 E-value=0.00034 Score=57.00 Aligned_cols=67 Identities=12% Similarity=-0.069 Sum_probs=44.7
Q ss_pred CeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCc
Q 038822 36 KKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLE 115 (162)
Q Consensus 36 k~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 115 (162)
+++.+.+|++.|||+|+.- .|.++++..++. ++ .+.-|..+ ...++++.|++.
T Consensus 117 ~~~~i~~f~a~~C~~C~~~-~~~l~~~a~~~~--~v-~~~~vd~~-----------------------~~~~~~~~~~i~ 169 (521)
T 1hyu_A 117 GDFEFETYYSLSCHNCPDV-VQALNLMAVLNP--RI-KHTAIDGG-----------------------TFQNEITERNVM 169 (521)
T ss_dssp SCEEEEEEECTTCSSHHHH-HHHHHHHHHHCT--TE-EEEEEETT-----------------------TCHHHHHHTTCC
T ss_pred CCcceEEEECCCCcCcHHH-HHHHHHHHhHcC--ce-EEEEEech-----------------------hhHHHHHHhCCC
Confidence 3344555559999999996 899988877653 45 55555554 235678888886
Q ss_pred cccccCCCCccceeEEEEEcCCeEEEE
Q 038822 116 LDLSEKGLGTQSRRFALLVDDLKVKAA 142 (162)
Q Consensus 116 ~~~~~~~~~~~~~~~~~ii~~g~i~~~ 142 (162)
+.| ++++ ||+.+..
T Consensus 170 --------svP----t~~i-~g~~~~~ 183 (521)
T 1hyu_A 170 --------GVP----AVFV-NGKEFGQ 183 (521)
T ss_dssp --------SSS----EEEE-TTEEEEE
T ss_pred --------ccC----EEEE-CCEEEec
Confidence 566 3444 7777643
No 238
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=97.23 E-value=9.5e-05 Score=49.25 Aligned_cols=42 Identities=10% Similarity=-0.005 Sum_probs=31.2
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN 80 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d 80 (162)
.+.++++.|| +. |..|+.. .|.+.+++++++++ + .++-|..|
T Consensus 22 ~~~pv~v~f~-a~-~~~c~~~-~p~l~~~A~~~~gk-~-~f~~vd~d 63 (133)
T 2djk_A 22 AGIPLAYIFA-ET-AEERKEL-SDKLKPIAEAQRGV-I-NFGTIDAK 63 (133)
T ss_dssp TTSCEEEEEC-SC-SSSHHHH-HHHHHHHHHSSTTT-S-EEEEECTT
T ss_pred CCCCEEEEEe-cC-hhhHHHH-HHHHHHHHHHhCCe-E-EEEEEchH
Confidence 3567777777 67 7899986 89999999888653 5 56656554
No 239
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=97.12 E-value=0.00078 Score=43.47 Aligned_cols=37 Identities=8% Similarity=0.072 Sum_probs=26.7
Q ss_pred EEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC
Q 038822 38 VILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN 80 (162)
Q Consensus 38 vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d 80 (162)
.|+.|+ +.|||.|..- .+.|.++.++ .++ .+.-|.++
T Consensus 31 ~vv~y~-~~~C~~C~~a-~~~L~~l~~e---~~i-~~~~vDId 67 (107)
T 2fgx_A 31 KLVVYG-REGCHLCEEM-IASLRVLQKK---SWF-ELEVINID 67 (107)
T ss_dssp CEEEEE-CSSCHHHHHH-HHHHHHHHHH---SCC-CCEEEETT
T ss_pred EEEEEe-CCCChhHHHH-HHHHHHHHHh---cCC-eEEEEECC
Confidence 455555 8899999996 8888887765 356 66666665
No 240
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.04 E-value=0.0001 Score=46.88 Aligned_cols=49 Identities=6% Similarity=-0.024 Sum_probs=29.7
Q ss_pred ceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC
Q 038822 24 LQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN 80 (162)
Q Consensus 24 g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d 80 (162)
|..-.|.......+.|+.|+ +.|||.|..- .+.|.++. .++ .+.-|..+
T Consensus 4 ~~~~~l~~~~~~~~~v~~f~-~~~C~~C~~~-~~~L~~l~-----~~i-~~~~vdi~ 52 (100)
T 1wjk_A 4 GSSGNLSASNRALPVLTLFT-KAPCPLCDEA-KEVLQPYK-----DRF-ILQEVDIT 52 (100)
T ss_dssp CCCCCCCCSCCCCCEEEEEE-CSSCHHHHHH-HHHTSTTS-----SSS-EEEEEETT
T ss_pred CcchhhhhccCCCCEEEEEe-CCCCcchHHH-HHHHHHhh-----hCC-eEEEEECC
Confidence 33444444323445556655 8899999995 66665443 346 67767665
No 241
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=97.01 E-value=6.8e-05 Score=46.62 Aligned_cols=22 Identities=14% Similarity=0.157 Sum_probs=15.2
Q ss_pred EEEEeeCCCCCCCCcCCHhHHHHh
Q 038822 39 ILFGVPGDFTPTCSLKHVPGFIEK 62 (162)
Q Consensus 39 vl~f~~~~~cp~C~~~~~~~l~~~ 62 (162)
|+.|| +.|||+|..- .+.|.++
T Consensus 3 vv~f~-a~~C~~C~~~-~~~L~~~ 24 (87)
T 1ttz_A 3 LTLYQ-RDDCHLCDQA-VEALAQA 24 (87)
T ss_dssp EEEEE-CSSCHHHHHH-HHHHHHT
T ss_pred EEEEE-CCCCchHHHH-HHHHHHH
Confidence 34454 8999999995 6555443
No 242
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=96.66 E-value=0.0011 Score=39.75 Aligned_cols=30 Identities=13% Similarity=0.234 Sum_probs=20.9
Q ss_pred eeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCC
Q 038822 43 VPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVND 81 (162)
Q Consensus 43 ~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~ 81 (162)
|.++|||.|+.. .+.|.+ .++ .+..+..+.
T Consensus 6 f~~~~C~~C~~~-~~~l~~-------~~i-~~~~vdi~~ 35 (81)
T 1h75_A 6 YTRNDCVQCHAT-KRAMEN-------RGF-DFEMINVDR 35 (81)
T ss_dssp EECTTCHHHHHH-HHHHHH-------TTC-CCEEEETTT
T ss_pred EcCCCChhHHHH-HHHHHH-------CCC-CeEEEECCC
Confidence 448899999986 655543 466 677777764
No 243
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=96.61 E-value=0.00056 Score=41.36 Aligned_cols=37 Identities=8% Similarity=-0.000 Sum_probs=27.0
Q ss_pred EEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC
Q 038822 39 ILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN 80 (162)
Q Consensus 39 vl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d 80 (162)
|+.|+ ++|||.|... .+.|.++..++ .++ .+..+..+
T Consensus 3 v~~f~-~~~C~~C~~~-~~~l~~l~~~~--~~i-~~~~vdi~ 39 (85)
T 1ego_A 3 TVIFG-RSGCPYCVRA-KDLAEKLSNER--DDF-QYQYVDIR 39 (85)
T ss_dssp EEEEC-CTTSTHHHHH-HHHHHHHHHHH--SSC-EEEEECHH
T ss_pred EEEEe-CCCCCCHHHH-HHHHHHHHhcC--CCc-eEEEEecc
Confidence 34444 8899999997 88888887664 467 77766653
No 244
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=96.61 E-value=0.0021 Score=49.51 Aligned_cols=40 Identities=18% Similarity=0.238 Sum_probs=30.9
Q ss_pred eEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC
Q 038822 37 KVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN 80 (162)
Q Consensus 37 ~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d 80 (162)
.++|.|+ +.||+.|... .+.+.+++++++++ + .++.|..+
T Consensus 137 ~~~v~F~-~~~~~~~~~~-~~~~~~~A~~~~~~-i-~f~~vd~~ 176 (361)
T 3uem_A 137 THILLFL-PKSVSDYDGK-LSNFKTAAESFKGK-I-LFIFIDSD 176 (361)
T ss_dssp EEEEEEC-CSSSSSHHHH-HHHHHHHHGGGTTT-C-EEEEECTT
T ss_pred cEEEEEE-eCCchhHHHH-HHHHHHHHHHccCc-e-EEEEecCC
Confidence 4455565 8899999996 99999999999764 6 66666654
No 245
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=96.57 E-value=0.0014 Score=38.45 Aligned_cols=30 Identities=7% Similarity=0.099 Sum_probs=20.5
Q ss_pred eeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCC
Q 038822 43 VPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVND 81 (162)
Q Consensus 43 ~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~ 81 (162)
|.+.|||.|++. .+.|.+ .++ .+..+..+.
T Consensus 6 y~~~~C~~C~~~-~~~l~~-------~~i-~~~~~di~~ 35 (75)
T 1r7h_A 6 YTKPACVQCTAT-KKALDR-------AGL-AYNTVDISL 35 (75)
T ss_dssp EECTTCHHHHHH-HHHHHH-------TTC-CCEEEETTT
T ss_pred EeCCCChHHHHH-HHHHHH-------cCC-CcEEEECCC
Confidence 447899999996 665553 356 666666654
No 246
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=96.38 E-value=0.00033 Score=53.12 Aligned_cols=37 Identities=14% Similarity=0.004 Sum_probs=26.3
Q ss_pred eeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHH
Q 038822 25 QQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKAD 64 (162)
Q Consensus 25 ~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~ 64 (162)
..+.+.+.++ +..++.|| ++|||+|+.. .|.+.++.+
T Consensus 188 ~~~~la~~l~-~~~vV~F~-A~WC~~Ck~l-~p~le~lA~ 224 (291)
T 3kp9_A 188 LAVGLAAHLR-QIGGTMYG-AYWCPHCQDQ-KELFGAAFD 224 (291)
T ss_dssp THHHHHHHHH-HTTCEEEE-CTTCHHHHHH-HHHHGGGGG
T ss_pred HHHHHHHHhC-CCCEEEEE-CCCCHHHHHH-HHHHHHHHH
Confidence 4556666543 33456676 9999999997 888888763
No 247
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=96.16 E-value=0.0012 Score=44.99 Aligned_cols=27 Identities=19% Similarity=0.112 Sum_probs=18.8
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHh
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEK 62 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~ 62 (162)
.++.+|+.|. -.+||+|++- .+.+.++
T Consensus 13 ~a~~~vv~f~-D~~Cp~C~~~-~~~l~~l 39 (147)
T 3gv1_A 13 NGKLKVAVFS-DPDCPFCKRL-EHEFEKM 39 (147)
T ss_dssp TCCEEEEEEE-CTTCHHHHHH-HHHHTTC
T ss_pred CCCEEEEEEE-CCCChhHHHH-HHHHhhc
Confidence 3555555555 8899999996 7777654
No 248
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=95.77 E-value=0.011 Score=43.27 Aligned_cols=30 Identities=13% Similarity=-0.083 Sum_probs=23.6
Q ss_pred CCeEEEEEeeCCC--CCCCCcCCHhHHHHhHHHH
Q 038822 35 GKKVILFGVPGDF--TPTCSLKHVPGFIEKADEL 66 (162)
Q Consensus 35 gk~vvl~f~~~~~--cp~C~~~~~~~l~~~~~~~ 66 (162)
+++++|.|| +.| |+.|..- .+.+.++++..
T Consensus 25 ~~pv~v~~~-~~~~~c~~c~~~-~~~l~ela~~~ 56 (243)
T 2hls_A 25 VNPVEVHVF-LSKSGCETCEDT-LRLMKLFEEES 56 (243)
T ss_dssp CSCEEEEEE-ECSSSCTTHHHH-HHHHHHHHHHS
T ss_pred CCCEEEEEE-eCCCCCCchHHH-HHHHHHHHHhc
Confidence 468888888 678 9999985 77777777653
No 249
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=95.76 E-value=0.015 Score=35.35 Aligned_cols=40 Identities=15% Similarity=0.106 Sum_probs=24.1
Q ss_pred eeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhC
Q 038822 43 VPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTF 92 (162)
Q Consensus 43 ~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~ 92 (162)
|...|||.|++. .+.|.+ .++ .+..+..+ .+...++.+..
T Consensus 11 y~~~~C~~C~~~-~~~L~~-------~~i-~~~~vdv~-~~~~~~l~~~~ 50 (89)
T 2klx_A 11 YTRPNCPYCKRA-RDLLDK-------KGV-KYTDIDAS-TSLRQEMVQRA 50 (89)
T ss_dssp ESCSCCTTTHHH-HHHHHH-------HTC-CEEEECSC-HHHHHHHHHHH
T ss_pred EECCCChhHHHH-HHHHHH-------cCC-CcEEEECC-HHHHHHHHHHh
Confidence 447899999985 554443 356 66667766 44334444433
No 250
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=95.58 E-value=0.02 Score=42.32 Aligned_cols=42 Identities=14% Similarity=0.064 Sum_probs=29.9
Q ss_pred CCCeEEEEEee-CCCCCCCCcCCHhHHHHhHHHHHh--CCCCeEEEEEcCC
Q 038822 34 AGKKVILFGVP-GDFTPTCSLKHVPGFIEKADELQS--KGVDEILCISVND 81 (162)
Q Consensus 34 ~gk~vvl~f~~-~~~cp~C~~~~~~~l~~~~~~~~~--~~~~~v~~is~d~ 81 (162)
.+++++|.||. ++||+ - .|.+.++++++.. .++ .|.-|..+.
T Consensus 32 ~~~~vlV~Fy~~ApWCg----l-~P~~e~lA~~~~~~~~~v-~~akVD~d~ 76 (248)
T 2c0g_A 32 RFPYSVVKFDIASPYGE----K-HEAFTAFSKSAHKATKDL-LIATVGVKD 76 (248)
T ss_dssp TSSEEEEEEEESSCCSH----H-HHHHHHHHHHHHHHCSSE-EEEEEEECS
T ss_pred cCCCEEEEEECCCCCCc----c-HHHHHHHHHHHhccCCCe-EEEEEECCc
Confidence 35667777774 78998 4 7999999999975 345 566666553
No 251
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=95.56 E-value=0.0082 Score=37.44 Aligned_cols=39 Identities=5% Similarity=0.027 Sum_probs=24.1
Q ss_pred eeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCC-HHHHHHHHH
Q 038822 43 VPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVND-PFVMKAWAK 90 (162)
Q Consensus 43 ~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~-~~~~~~~~~ 90 (162)
|..+|||+|.+- -. .++++|+ .+--+..+. ++..+.+.+
T Consensus 9 Ys~~~Cp~C~~a-K~-------~L~~~gi-~y~~idi~~d~~~~~~~~~ 48 (92)
T 2lqo_A 9 YTTSWCGYCLRL-KT-------ALTANRI-AYDEVDIEHNRAAAEFVGS 48 (92)
T ss_dssp EECTTCSSHHHH-HH-------HHHHTTC-CCEEEETTTCHHHHHHHHH
T ss_pred EcCCCCHhHHHH-HH-------HHHhcCC-ceEEEEcCCCHHHHHHHHH
Confidence 447899999984 22 2445677 777777753 444444444
No 252
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=95.50 E-value=0.0028 Score=44.76 Aligned_cols=42 Identities=26% Similarity=0.351 Sum_probs=30.6
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEc
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISV 79 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~ 79 (162)
.++.+|+.|| ..|||+|..- .+.+.++.+++.+ .+ .+.-+..
T Consensus 23 ~~~v~vv~f~-d~~Cp~C~~~-~~~l~~~~~~~~~-~v-~~~~~p~ 64 (193)
T 3hz8_A 23 AGKVEVLEFF-GYFCPHCAHL-EPVLSKHAKSFKD-DM-YLRTEHV 64 (193)
T ss_dssp TTSEEEEEEE-CTTCHHHHHH-HHHHHHHHTTCCT-TE-EEEEEEC
T ss_pred CCCcEEEEEE-CCCChhHHHH-HHHHHHHHHHCCC-Ce-EEEEecC
Confidence 3566777776 8899999996 8988888877665 35 5555544
No 253
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=95.44 E-value=0.0087 Score=44.00 Aligned_cols=40 Identities=15% Similarity=0.115 Sum_probs=28.4
Q ss_pred CCCeEEEEEeeC--CCCCCCCcCCHhHHHHhHHHHHh-CCCCeEEEEEcC
Q 038822 34 AGKKVILFGVPG--DFTPTCSLKHVPGFIEKADELQS-KGVDEILCISVN 80 (162)
Q Consensus 34 ~gk~vvl~f~~~--~~cp~C~~~~~~~l~~~~~~~~~-~~~~~v~~is~d 80 (162)
.+++++|.|| + +||+ - .|.+.++++++.+ .++ .|..|..+
T Consensus 21 ~~~~vlV~Fy-A~~pWCg----l-~P~~e~lA~~~~~~~~v-~~akVDvd 63 (240)
T 2qc7_A 21 KSKFVLVKFD-TQYPYGE----K-QDEFKRLAENSASSDDL-LVAEVGIS 63 (240)
T ss_dssp GCSEEEEEEC-CSSCCSH----H-HHHHHHHHHHHTTCTTE-EEEEECCC
T ss_pred CCCCEEEEEe-CCCCCCc----c-hHHHHHHHHHhcCCCCe-EEEEEeCC
Confidence 3567777777 7 8888 4 7999999999874 345 55555543
No 254
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=95.22 E-value=0.0014 Score=46.78 Aligned_cols=43 Identities=26% Similarity=0.249 Sum_probs=32.5
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHH---HHhHHHHHhCCCCeEEEEEcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGF---IEKADELQSKGVDEILCISVN 80 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l---~~~~~~~~~~~~~~v~~is~d 80 (162)
.++++|+.|| +.|||+|..- .|.+ .++.+++.+ ++ .+.-+..+
T Consensus 112 ~~~~~vveFf-~~~C~~C~~~-~p~~~~~~~l~~~~~~-~v-~~~~~~v~ 157 (197)
T 1un2_A 112 AGAPQVLEFF-SFFCPHCYQF-EEVLHISDNVKKKLPE-GV-KMTKYHVN 157 (197)
T ss_dssp TTCCSEEEEE-CTTCHHHHHH-HHTSCHHHHHTTSSCT-TC-CEEEEECS
T ss_pred CCCCEEEEEE-CCCChhHHHh-CcccccHHHHHHHCCC-CC-EEEEeccC
Confidence 4677888888 7999999996 7887 777777754 46 66666653
No 255
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=94.69 E-value=0.02 Score=36.10 Aligned_cols=41 Identities=17% Similarity=0.062 Sum_probs=23.2
Q ss_pred hhcCCCeEEEEEee---CCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC
Q 038822 31 SLAAGKKVILFGVP---GDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN 80 (162)
Q Consensus 31 ~~~~gk~vvl~f~~---~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d 80 (162)
+..+..+++|++.. +.|||.|.+- .+.|.+ .++ .+..+..+
T Consensus 12 ~~i~~~~vvvf~~g~~~~~~C~~C~~~-~~~L~~-------~~i-~~~~vdi~ 55 (105)
T 2yan_A 12 VLTNKASVMLFMKGNKQEAKCGFSKQI-LEILNS-------TGV-EYETFDIL 55 (105)
T ss_dssp HHHTSSSEEEEESBCSSSBCTTHHHHH-HHHHHH-------HTC-CCEEEEGG
T ss_pred HHhccCCEEEEEecCCCCCCCccHHHH-HHHHHH-------CCC-CeEEEECC
Confidence 33344556653321 1799999985 554443 356 56566654
No 256
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=94.40 E-value=0.033 Score=35.44 Aligned_cols=61 Identities=18% Similarity=0.063 Sum_probs=33.8
Q ss_pred hhhcCCCeEEEEEeeC----CCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCC-HHHHHHHHHhCCCCCceEEE
Q 038822 30 HSLAAGKKVILFGVPG----DFTPTCSLKHVPGFIEKADELQSKGVDEILCISVND-PFVMKAWAKTFPKNKSVKFL 101 (162)
Q Consensus 30 ~~~~~gk~vvl~f~~~----~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~-~~~~~~~~~~~~~~~~~~~l 101 (162)
.+..+..+++|+.. + .|||.|.+- ...|. +.++ .+..+..+. ++...++.+..+. ..+|.+
T Consensus 9 ~~~i~~~~vvvy~~-g~~~~~~Cp~C~~a-k~~L~-------~~~i-~~~~vdi~~~~~~~~~l~~~~g~-~~vP~i 74 (109)
T 1wik_A 9 KVLTNKASVMLFMK-GNKQEAKCGFSKQI-LEILN-------STGV-EYETFDILEDEEVRQGLKTFSNW-PTYPQL 74 (109)
T ss_dssp HHHHTTSSEEEEES-STTTCCCSSTHHHH-HHHHH-------HTCS-CEEEEESSSCHHHHHHHHHHHSC-CSSCEE
T ss_pred HHHhccCCEEEEEe-cCCCCCCCchHHHH-HHHHH-------HcCC-CeEEEECCCCHHHHHHHHHHhCC-CCCCEE
Confidence 34344555665443 3 799999985 44443 3477 777777753 4333444444442 245444
No 257
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=94.35 E-value=0.0032 Score=39.63 Aligned_cols=30 Identities=13% Similarity=0.083 Sum_probs=18.0
Q ss_pred hhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHh
Q 038822 30 HSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEK 62 (162)
Q Consensus 30 ~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~ 62 (162)
.+..+... |+.|+ ++|||.|++- .+.|.++
T Consensus 6 ~~~i~~~~-v~~f~-~~~C~~C~~~-~~~L~~~ 35 (105)
T 1kte_A 6 NSKIQPGK-VVVFI-KPTCPFCRKT-QELLSQL 35 (105)
T ss_dssp HHHCCTTC-EEEEE-CSSCHHHHHH-HHHHHHS
T ss_pred HhhcccCC-EEEEE-cCCCHhHHHH-HHHHHHc
Confidence 33333343 44454 7899999985 6655543
No 258
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=94.24 E-value=0.022 Score=33.77 Aligned_cols=29 Identities=17% Similarity=0.291 Sum_probs=18.2
Q ss_pred eeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC
Q 038822 43 VPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN 80 (162)
Q Consensus 43 ~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d 80 (162)
|...|||.|++- .+.|.+ .++ .+..+..+
T Consensus 6 y~~~~C~~C~~~-~~~l~~-------~~i-~~~~~~i~ 34 (82)
T 1fov_A 6 YTKETCPYCHRA-KALLSS-------KGV-SFQELPID 34 (82)
T ss_dssp EECSSCHHHHHH-HHHHHH-------HTC-CCEEEECT
T ss_pred EECCCChhHHHH-HHHHHH-------CCC-CcEEEECC
Confidence 347899999985 554443 355 55555554
No 259
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=94.09 E-value=0.014 Score=40.93 Aligned_cols=30 Identities=10% Similarity=-0.134 Sum_probs=26.0
Q ss_pred CCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHH
Q 038822 35 GKKVILFGVPGDFTPTCSLKHVPGFIEKADEL 66 (162)
Q Consensus 35 gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~ 66 (162)
++++|+.|| ..|||+|.+- -|.+.++.+++
T Consensus 22 ~~~~vvef~-d~~Cp~C~~~-~~~~~~~~~~~ 51 (185)
T 3feu_A 22 GMAPVTEVF-ALSCGHCRNM-ENFLPVISQEA 51 (185)
T ss_dssp CCCSEEEEE-CTTCHHHHHH-GGGHHHHHHHH
T ss_pred CCCEEEEEE-CCCChhHHHh-hHHHHHHHHHh
Confidence 577888888 7899999996 79999998888
No 260
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.97 E-value=0.15 Score=32.45 Aligned_cols=45 Identities=7% Similarity=-0.074 Sum_probs=26.4
Q ss_pred eCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCC-HHHHHHHHHh
Q 038822 44 PGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVND-PFVMKAWAKT 91 (162)
Q Consensus 44 ~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~-~~~~~~~~~~ 91 (162)
..++||.|.. ...-++..+-+++.++ .+-.+..+. ++...++.+.
T Consensus 14 ~~~~C~~C~~--~~~~~~ak~~L~~~gi-~y~~vdI~~~~~~~~~l~~~ 59 (111)
T 2ct6_A 14 IASSSGFVAI--KKKQQDVVRFLEANKI-EFEEVDITMSEEQRQWMYKN 59 (111)
T ss_dssp ECSSCSCHHH--HHHHHHHHHHHHHTTC-CEEEEETTTCHHHHHHHHHS
T ss_pred EcCCCCCccc--chhHHHHHHHHHHcCC-CEEEEECCCCHHHHHHHHHH
Confidence 3678999994 1222334444556788 777787764 3333444444
No 261
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=93.80 E-value=0.043 Score=33.39 Aligned_cols=30 Identities=20% Similarity=0.189 Sum_probs=19.3
Q ss_pred eeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCC
Q 038822 43 VPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVND 81 (162)
Q Consensus 43 ~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~ 81 (162)
|...|||.|++- .+.|.+ .++ .+..+..+.
T Consensus 11 y~~~~C~~C~~~-~~~L~~-------~~i-~~~~~di~~ 40 (92)
T 2khp_A 11 YTRPGCPYCARA-KALLAR-------KGA-EFNEIDASA 40 (92)
T ss_dssp EECTTCHHHHHH-HHHHHH-------TTC-CCEEEESTT
T ss_pred EECCCChhHHHH-HHHHHH-------cCC-CcEEEECCC
Confidence 337899999985 544443 456 666666653
No 262
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=93.57 E-value=0.13 Score=37.17 Aligned_cols=52 Identities=19% Similarity=0.146 Sum_probs=37.9
Q ss_pred ceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHHHhcC
Q 038822 97 SVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDILKSL 162 (162)
Q Consensus 97 ~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~il~~l 162 (162)
.+....|.+..+++.||+. ++|+ .++++ +|++......... .+.+...|+.|
T Consensus 186 ~v~~~~~~~~~l~~~f~v~--------~~Ps---lvl~~~~g~~~~~~~~~~~---r~~~~~~l~~~ 238 (244)
T 3q6o_A 186 AVRRVLNTEANVVRKFGVT--------DFPS---CYLLFRNGSVSRVPVLMES---RSFYTAYLQRL 238 (244)
T ss_dssp EEEEEETTCHHHHHHHTCC--------CSSE---EEEEETTSCEEECCCSSSS---HHHHHHHHHTC
T ss_pred EEEEEeCchHHHHHHcCCC--------CCCe---EEEEeCCCCeEeecccccc---HHHHHHHHHhC
Confidence 5677778889999999997 4564 77888 9999998864433 35566666543
No 263
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=93.49 E-value=0.026 Score=34.39 Aligned_cols=18 Identities=11% Similarity=0.074 Sum_probs=12.4
Q ss_pred eeCCCCCCCCcCCHhHHHH
Q 038822 43 VPGDFTPTCSLKHVPGFIE 61 (162)
Q Consensus 43 ~~~~~cp~C~~~~~~~l~~ 61 (162)
|...|||.|++- ...|.+
T Consensus 17 y~~~~Cp~C~~~-~~~L~~ 34 (92)
T 3ic4_A 17 YGLSTCPHCKRT-LEFLKR 34 (92)
T ss_dssp EECTTCHHHHHH-HHHHHH
T ss_pred EECCCChHHHHH-HHHHHH
Confidence 347899999985 544443
No 264
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=93.40 E-value=0.032 Score=34.98 Aligned_cols=28 Identities=21% Similarity=0.272 Sum_probs=18.0
Q ss_pred CCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCC
Q 038822 45 GDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVND 81 (162)
Q Consensus 45 ~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~ 81 (162)
..|||.|.+- ...|.+ .++ .+..+..+.
T Consensus 23 ~~~Cp~C~~a-k~~L~~-------~~i-~y~~idI~~ 50 (99)
T 3qmx_A 23 WSTCPFCMRA-LALLKR-------KGV-EFQEYCIDG 50 (99)
T ss_dssp CTTCHHHHHH-HHHHHH-------HTC-CCEEEECTT
T ss_pred cCCChhHHHH-HHHHHH-------CCC-CCEEEEcCC
Confidence 7899999995 544443 355 555566654
No 265
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.04 E-value=0.058 Score=35.47 Aligned_cols=35 Identities=11% Similarity=0.186 Sum_probs=21.3
Q ss_pred CCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC
Q 038822 35 GKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN 80 (162)
Q Consensus 35 gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d 80 (162)
.+.++| |+ ..|||+|++- .+.|.++ ++ .+..+..+
T Consensus 26 ~~~vvv-f~-~~~Cp~C~~~-~~~L~~~-------~i-~~~~vdid 60 (130)
T 2cq9_A 26 DNCVVI-FS-KTSCSYCTMA-KKLFHDM-------NV-NYKVVELD 60 (130)
T ss_dssp HSSEEE-EE-CSSCSHHHHH-HHHHHHH-------TC-CCEEEETT
T ss_pred CCcEEE-EE-cCCChHHHHH-HHHHHHc-------CC-CcEEEECc
Confidence 344544 44 7899999985 6555543 45 45455554
No 266
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=93.04 E-value=0.011 Score=41.57 Aligned_cols=42 Identities=12% Similarity=0.127 Sum_probs=29.2
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHH---HHhHHHHHhCCCCeEEEEEc
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGF---IEKADELQSKGVDEILCISV 79 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l---~~~~~~~~~~~~~~v~~is~ 79 (162)
.++++|+.|| ..|||+|..- .+.+ .++.+++.+ ++ .++-+..
T Consensus 13 ~~~~~vvef~-d~~Cp~C~~~-~~~~~~~~~~~~~~~~-~v-~~~~~~~ 57 (189)
T 3l9v_A 13 VDAPAVVEFF-SFYCPPCYAF-SQTMGVDQAIRHVLPQ-GS-RMVKYHV 57 (189)
T ss_dssp TTCCSEEEEE-CTTCHHHHHH-HHTSCHHHHHHTTCCT-TC-CEEEEEC
T ss_pred CCCCEEEEEE-CCCChhHHHH-hHhccchHHHHHhCCC-CC-EEEEEec
Confidence 4677888888 8999999995 6775 455555543 46 6665544
No 267
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=92.69 E-value=0.046 Score=34.81 Aligned_cols=24 Identities=13% Similarity=0.178 Sum_probs=14.8
Q ss_pred CCeEEEEEeeCCCCCCCCcCCHhHHHH
Q 038822 35 GKKVILFGVPGDFTPTCSLKHVPGFIE 61 (162)
Q Consensus 35 gk~vvl~f~~~~~cp~C~~~~~~~l~~ 61 (162)
.+++++ |+ .+|||+|.+- .+.|.+
T Consensus 18 ~~~v~v-y~-~~~Cp~C~~~-~~~L~~ 41 (113)
T 3rhb_A 18 ENTVVI-YS-KTWCSYCTEV-KTLFKR 41 (113)
T ss_dssp HSSEEE-EE-CTTCHHHHHH-HHHHHH
T ss_pred cCCEEE-EE-CCCChhHHHH-HHHHHH
Confidence 344433 44 7899999985 544443
No 268
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=92.63 E-value=0.057 Score=34.91 Aligned_cols=33 Identities=15% Similarity=0.368 Sum_probs=19.1
Q ss_pred EEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCC---CCeEEEEEcC
Q 038822 39 ILFGVPGDFTPTCSLKHVPGFIEKADELQSKG---VDEILCISVN 80 (162)
Q Consensus 39 vl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~---~~~v~~is~d 80 (162)
|+.|+ .+|||.|.+ + +.+.+++.+ + .+..+..+
T Consensus 27 Vvvf~-~~~Cp~C~~--a-----lk~~L~~~~~~~i-~~~~vdid 62 (118)
T 3c1r_A 27 IFVAS-KTYCPYCHA--A-----LNTLFEKLKVPRS-KVLVLQLN 62 (118)
T ss_dssp EEEEE-CSSCHHHHH--H-----HHHHHTTSCCCGG-GEEEEEGG
T ss_pred EEEEE-cCCCcCHHH--H-----HHHHHHHcCCCCC-CeEEEECc
Confidence 33344 789999987 3 122234445 5 56666654
No 269
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=92.59 E-value=0.036 Score=35.50 Aligned_cols=20 Identities=15% Similarity=0.079 Sum_probs=13.4
Q ss_pred EEEEEeeCCCCCCCCcCCHhHH
Q 038822 38 VILFGVPGDFTPTCSLKHVPGF 59 (162)
Q Consensus 38 vvl~f~~~~~cp~C~~~~~~~l 59 (162)
.|+.|+ .+|||.|.+- .+.|
T Consensus 20 ~vv~f~-~~~Cp~C~~~-~~~L 39 (114)
T 2hze_A 20 KVTIFV-KYTCPFCRNA-LDIL 39 (114)
T ss_dssp CEEEEE-CTTCHHHHHH-HHHH
T ss_pred CEEEEE-eCCChhHHHH-HHHH
Confidence 344454 7899999985 5444
No 270
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.29 E-value=0.43 Score=33.23 Aligned_cols=90 Identities=6% Similarity=-0.040 Sum_probs=52.2
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHH---HHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCchHH-
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGF---IEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSAKYT- 109 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l---~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~- 109 (162)
.+|+++|+++ ++||+.|..- .... .+..+-+++ ++ .+++.+.++.+....++...+- .+ ...++
T Consensus 54 e~K~LlVyLh-s~~~~~~~~f-~~~~L~~~~V~~~l~~-nf-V~w~~dv~~~e~~~~~~~~~~~--~~------g~~~a~ 121 (178)
T 2ec4_A 54 DRKLLAIYLH-HDESVLTNVF-CSQMLCAESIVSYLSQ-NF-ITWAWDLTKDSNRARFLTMCNR--HF------GSVVAQ 121 (178)
T ss_dssp TCCEEEEEEE-CSSCSHHHHH-HHHTTTCHHHHHHHHH-TE-EEEEEECCSHHHHHHHHHHHHH--HT------CHHHHH
T ss_pred hCcEEEEEEe-CCCCccHHHH-HHHhcCCHHHHHHHHc-CE-EEEEEeCCCchhhhhhhhhhhh--hh------HHHHHH
Confidence 4677777777 8899988762 3221 123333343 67 7888889888866665544421 11 12333
Q ss_pred --HHcCCccccccCCCCccceeEEEEEc-C---CeEEEEEeec
Q 038822 110 --HALGLELDLSEKGLGTQSRRFALLVD-D---LKVKAANVES 146 (162)
Q Consensus 110 --~~~gv~~~~~~~~~~~~~~~~~~ii~-~---g~i~~~~~~~ 146 (162)
+.|++. ++| +..|+. . ++|+....|.
T Consensus 122 ~~~~~~~~--------~~P---~l~ii~~~~~~~~vl~~~~G~ 153 (178)
T 2ec4_A 122 TIRTQKTD--------QFP---LFLIIMGKRSSNEVLNVIQGN 153 (178)
T ss_dssp HHHHSCST--------TCS---EEEEECCCSSCCCEEEEECSC
T ss_pred HHhhcCCC--------CCC---eEEEEEcCCCceEEEEEEeCC
Confidence 447765 455 366665 4 3667776654
No 271
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=91.76 E-value=0.069 Score=36.00 Aligned_cols=24 Identities=13% Similarity=0.162 Sum_probs=15.9
Q ss_pred CCeEEEEEeeCCCCCCCCcCCHhHHHH
Q 038822 35 GKKVILFGVPGDFTPTCSLKHVPGFIE 61 (162)
Q Consensus 35 gk~vvl~f~~~~~cp~C~~~~~~~l~~ 61 (162)
...++| |+ .+|||+|..- .+.|.+
T Consensus 48 ~~~Vvv-f~-~~~Cp~C~~~-k~~L~~ 71 (146)
T 2ht9_A 48 DNCVVI-FS-KTSCSYCTMA-KKLFHD 71 (146)
T ss_dssp HCSEEE-EE-CTTCHHHHHH-HHHHHH
T ss_pred CCCEEE-EE-CCCChhHHHH-HHHHHH
Confidence 344544 44 8999999985 655554
No 272
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=91.37 E-value=0.09 Score=33.64 Aligned_cols=36 Identities=17% Similarity=0.314 Sum_probs=21.1
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN 80 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d 80 (162)
+.++++| |..+|||.|.+- ...|.+ .|+ ..-.+..|
T Consensus 15 ~~~~v~v--y~~~~Cp~C~~a-k~~L~~-------~~i-~~~~~dvd 50 (114)
T 3h8q_A 15 ERSRVVI--FSKSYCPHSTRV-KELFSS-------LGV-ECNVLELD 50 (114)
T ss_dssp HHCSEEE--EECTTCHHHHHH-HHHHHH-------TTC-CCEEEETT
T ss_pred ccCCEEE--EEcCCCCcHHHH-HHHHHH-------cCC-CcEEEEec
Confidence 3344554 347899999885 444443 455 55555555
No 273
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=91.36 E-value=0.11 Score=33.81 Aligned_cols=65 Identities=8% Similarity=-0.036 Sum_probs=46.6
Q ss_pred EEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEc----CCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCc
Q 038822 40 LFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISV----NDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLE 115 (162)
Q Consensus 40 l~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~----d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 115 (162)
+.+|...+||.|++. ... +++.|+ .+-.+.. .+.+.+++|++..+. ++.-+.+..+..++.++..
T Consensus 2 i~iY~~~~C~~c~ka-~~~-------L~~~gi-~~~~~di~~~~~~~~el~~~l~~~~~--~~~~l~n~~~~~~k~l~~~ 70 (120)
T 3l78_A 2 VTLFLSPSCTSCRKA-RAW-------LNRHDV-VFQEHNIMTSPLSRDELLKILSYTEN--GTEDIISTRSKVFQKLDID 70 (120)
T ss_dssp EEEEECSSCHHHHHH-HHH-------HHHTTC-CEEEEETTTSCCCHHHHHHHHHHCSS--THHHHBCTTCHHHHHTTCC
T ss_pred EEEEeCCCCHHHHHH-HHH-------HHHcCC-CeEEEecccCCCcHHHHHHHHhhcCC--CHHHhhcCCcHHHHHcCCC
Confidence 345557789999985 433 345677 6666654 367889999998887 6666677788888888865
No 274
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=90.98 E-value=0.24 Score=29.48 Aligned_cols=19 Identities=16% Similarity=0.085 Sum_probs=12.6
Q ss_pred EEEeeCCCCCCCCcCCHhHH
Q 038822 40 LFGVPGDFTPTCSLKHVPGF 59 (162)
Q Consensus 40 l~f~~~~~cp~C~~~~~~~l 59 (162)
+.+|...|||.|++- ...|
T Consensus 6 v~ly~~~~Cp~C~~~-~~~L 24 (89)
T 3msz_A 6 VKIYTRNGCPYCVWA-KQWF 24 (89)
T ss_dssp EEEEECTTCHHHHHH-HHHH
T ss_pred EEEEEcCCChhHHHH-HHHH
Confidence 344457899999985 4433
No 275
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=90.75 E-value=0.2 Score=30.13 Aligned_cols=44 Identities=14% Similarity=-0.004 Sum_probs=25.6
Q ss_pred EeeCC----CCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC------CHHHHHHHHHhCCC
Q 038822 42 GVPGD----FTPTCSLKHVPGFIEKADELQSKGVDEILCISVN------DPFVMKAWAKTFPK 94 (162)
Q Consensus 42 f~~~~----~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d------~~~~~~~~~~~~~~ 94 (162)
+|..+ |||.|.+- ... +++.++ ..-.+..+ +++...++.+..+.
T Consensus 4 iY~~~~~~~~Cp~C~~a-k~~-------L~~~gi-~y~~idI~~~~~~~~~~~~~~l~~~~g~ 57 (87)
T 1aba_A 4 VYGYDSNIHKCGPCDNA-KRL-------LTVKKQ-PFEFINIMPEKGVFDDEKIAELLTKLGR 57 (87)
T ss_dssp EEECCTTTSCCHHHHHH-HHH-------HHHTTC-CEEEEESCSBTTBCCHHHHHHHHHHHTC
T ss_pred EEEeCCCCCcCccHHHH-HHH-------HHHcCC-CEEEEEeeccccccCHHHHHHHHHHhCC
Confidence 34467 89999884 322 334566 66666665 34444455555554
No 276
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=90.05 E-value=0.048 Score=34.18 Aligned_cols=21 Identities=5% Similarity=-0.072 Sum_probs=13.8
Q ss_pred EEEEeeCCCCCCCCcCCHhHHHH
Q 038822 39 ILFGVPGDFTPTCSLKHVPGFIE 61 (162)
Q Consensus 39 vl~f~~~~~cp~C~~~~~~~l~~ 61 (162)
|+.|+ .+|||.|.+- .+.|.+
T Consensus 24 v~ly~-~~~Cp~C~~a-k~~L~~ 44 (103)
T 3nzn_A 24 VIMYG-LSTCVWCKKT-KKLLTD 44 (103)
T ss_dssp EEEEE-CSSCHHHHHH-HHHHHH
T ss_pred EEEEc-CCCCchHHHH-HHHHHH
Confidence 33344 7899999995 544443
No 277
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=89.93 E-value=0.53 Score=28.64 Aligned_cols=47 Identities=9% Similarity=0.028 Sum_probs=24.3
Q ss_pred eCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCC-HHHHHHHHHhCC
Q 038822 44 PGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVND-PFVMKAWAKTFP 93 (162)
Q Consensus 44 ~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~-~~~~~~~~~~~~ 93 (162)
..++||.|.. ...-.+..+-+++.++ .+-.+..+. ++...++.+..|
T Consensus 8 ~~~~C~~c~~--~~~~~~ak~~L~~~~i-~~~~~di~~~~~~~~~l~~~~g 55 (93)
T 1t1v_A 8 STSVTGSREI--KSQQSEVTRILDGKRI-QYQLVDISQDNALRDEMRTLAG 55 (93)
T ss_dssp ECSSCSCHHH--HHHHHHHHHHHHHTTC-CCEEEETTSCHHHHHHHHHHTT
T ss_pred EcCCCCCchh--hHHHHHHHHHHHHCCC-ceEEEECCCCHHHHHHHHHHhC
Confidence 3678999941 1111122233455677 666676653 344444444444
No 278
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=89.69 E-value=1.9 Score=28.05 Aligned_cols=50 Identities=4% Similarity=-0.113 Sum_probs=31.4
Q ss_pred EEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC-CHHHHHHHHHhC
Q 038822 40 LFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN-DPFVMKAWAKTF 92 (162)
Q Consensus 40 l~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d-~~~~~~~~~~~~ 92 (162)
|..|.++.||.|.. ...=.+...-++++|+ .+--+.++ +++.-+.+.++.
T Consensus 2 V~vYtt~~c~~c~~--kk~c~~aK~lL~~kgV-~feEidI~~d~~~r~eM~~~~ 52 (121)
T 1u6t_A 2 IRVYIASSSGSTAI--KKKQQDVLGFLEANKI-GFEEKDIAANEENRKWMRENV 52 (121)
T ss_dssp EEEEECTTCSCHHH--HHHHHHHHHHHHHTTC-CEEEEECTTCHHHHHHHHHHS
T ss_pred EEEEecCCCCCccc--hHHHHHHHHHHHHCCC-ceEEEECCCCHHHHHHHHHhc
Confidence 33444778999953 1233344445677898 88888876 555555566666
No 279
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=89.54 E-value=0.17 Score=32.87 Aligned_cols=65 Identities=17% Similarity=0.178 Sum_probs=45.9
Q ss_pred EEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEc----CCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCc
Q 038822 40 LFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISV----NDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLE 115 (162)
Q Consensus 40 l~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~----d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 115 (162)
+.+|...+||.|++. ...| ++.|+ .+-.+.. -+.+.+++|++..|. ++.-+.+..+...+.++..
T Consensus 5 i~iY~~~~C~~c~ka-~~~L-------~~~gi-~~~~~di~~~~~~~~eL~~~l~~~g~--~~~~l~n~~~~~~k~l~l~ 73 (120)
T 3fz4_A 5 LTFYEYPKCSTCRRA-KAEL-------DDLAW-DYDAIDIKKNPPAASLIRNWLENSGL--ELKKFFNTSGQSYRALGLK 73 (120)
T ss_dssp EEEEECSSCHHHHHH-HHHH-------HHHTC-CEEEEETTTSCCCHHHHHHHHHHSCC--CGGGGBCTTSHHHHHTTHH
T ss_pred EEEEeCCCChHHHHH-HHHH-------HHcCC-ceEEEEeccCchhHHHHHHHHHHcCC--CHHHHhCCCCcchhhcCcc
Confidence 445556789999995 4333 34566 6655544 367899999999987 6666667788888888763
No 280
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=89.24 E-value=0.16 Score=24.26 Aligned_cols=21 Identities=14% Similarity=0.325 Sum_probs=18.4
Q ss_pred CCCCCCcCCHhHHHHhHHHHHh
Q 038822 47 FTPTCSLKHVPGFIEKADELQS 68 (162)
Q Consensus 47 ~cp~C~~~~~~~l~~~~~~~~~ 68 (162)
-||+|..+ +|.++.+..-|++
T Consensus 5 ~CpvCk~q-~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 5 CCPKCQYQ-APDMDTLQIHVME 25 (28)
T ss_dssp ECTTSSCE-ESSHHHHHHHHHH
T ss_pred cCcccccc-CcChHHHHHHHHH
Confidence 39999998 9999998888775
No 281
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=89.18 E-value=0.11 Score=33.30 Aligned_cols=62 Identities=10% Similarity=0.003 Sum_probs=31.8
Q ss_pred hhhhcCCCeEEEEEee---CCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC-CHHHHHHHHHhCCCCCceEE
Q 038822 29 VHSLAAGKKVILFGVP---GDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN-DPFVMKAWAKTFPKNKSVKF 100 (162)
Q Consensus 29 l~~~~~gk~vvl~f~~---~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d-~~~~~~~~~~~~~~~~~~~~ 100 (162)
+.++.+..++||+.-. .+|||.|.+- ...| ++.|+ .+-.+..+ +++....+.+..|. .++|.
T Consensus 9 v~~~i~~~~Vvlf~kg~~~~~~Cp~C~~a-k~~L-------~~~gi-~y~~~di~~d~~~~~~l~~~~g~-~tvP~ 74 (111)
T 3zyw_A 9 LKKLTHAAPCMLFMKGTPQEPRCGFSKQM-VEIL-------HKHNI-QFSSFDIFSDEEVRQGLKAYSSW-PTYPQ 74 (111)
T ss_dssp HHHHHTSSSEEEEESBCSSSBSSHHHHHH-HHHH-------HHTTC-CCEEEEGGGCHHHHHHHHHHHTC-CSSCE
T ss_pred HHHHHhcCCEEEEEecCCCCCcchhHHHH-HHHH-------HHcCC-CeEEEECcCCHHHHHHHHHHHCC-CCCCE
Confidence 3444466667666530 0789999984 4333 33566 55556554 33333333333342 24443
No 282
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=89.07 E-value=4.2 Score=32.68 Aligned_cols=110 Identities=18% Similarity=0.111 Sum_probs=64.0
Q ss_pred CCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHH
Q 038822 4 IAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPF 83 (162)
Q Consensus 4 l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~ 83 (162)
..||..+|+.-|. .+|+.+++-|++...+++|. +... ... .....+.. +..++ .+-.+....
T Consensus 420 ~~pG~r~p~~~l~-----~~~~~~~~~dl~g~~f~ll~-~~~~-----~~~-~~~~~~~~---~~~~~-~~~~~~~~~-- 481 (535)
T 3ihg_A 420 GRPGFRGPHVLVS-----RHGERLSTVDLFGDGWTLLA-GELG-----ADW-VAAAEAVS---AELGV-PVRAYRVGA-- 481 (535)
T ss_dssp CCTTSBCCCCEEE-----ETTEEEEGGGGCSSSEEEEE-CTTC-----HHH-HHHHHHHH---HHHTC-CEEEEEBTT--
T ss_pred CCCCCcCCCceee-----cCCceeeHHHhcCCceEEEe-cCCc-----cHH-HHHHHHHH---HhcCC-ceEEEEeCC--
Confidence 5789999999886 25778999998644555554 2110 111 11122222 23455 444444432
Q ss_pred HHHHHHHhCCCCCceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEeecCCcceeCCHHHHHh
Q 038822 84 VMKAWAKTFPKNKSVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVESGGDFTVSSADDILK 160 (162)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~~~~~~~~~~~~~il~ 160 (162)
. +.|+.+.+++.||+.-. . .+++. ||-|-+........ ....+.++|+
T Consensus 482 -------------~---~~d~~~~~~~~~~~~~~---------~---~~lvRPD~~va~r~~~~~~~-~~~~l~~~~~ 530 (535)
T 3ihg_A 482 -------------G---LTDPESAVSERYGIGKA---------G---ASLVRPDGIVAWRTDEAAAD-AAQTLEGVLR 530 (535)
T ss_dssp -------------T---BBCSSCCHHHHHTCTTT---------C---EEEECTTSBEEEEESSCCSS-HHHHHHHHHH
T ss_pred -------------c---cccCcchHHHHhCCCCC---------c---eEeeCCCceeEEecCCCCCC-HHHHHHHHHH
Confidence 1 46888999999998621 2 67777 99999887653221 2234445444
No 283
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=89.07 E-value=1.5 Score=36.33 Aligned_cols=125 Identities=8% Similarity=0.012 Sum_probs=67.7
Q ss_pred CCCCCCCCCeeeeeeecCCCceeEehhhhcC--CCeEEEEEeeCCCCCCCC-cCCHhHHHHhHH--------HHHh----
Q 038822 4 IAVGDPLPDGTLVYFDEQDQLQQVSVHSLAA--GKKVILFGVPGDFTPTCS-LKHVPGFIEKAD--------ELQS---- 68 (162)
Q Consensus 4 l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~--gk~vvl~f~~~~~cp~C~-~~~~~~l~~~~~--------~~~~---- 68 (162)
+.+|..+|+..+.. ..+|++++|.++++ |++++|.|- +.-.+.+. .. +..+.+... .|..
T Consensus 467 ~~~G~r~p~~~~~~---~~~g~~~~l~~~~~~~g~~~ll~~~-~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~ 541 (639)
T 2dkh_A 467 FTVGMRFHSAPVVR---VCDAKPVQLGHCGKADGRWRLYAFA-AQNDLAQPESG-LLALCRFLEGDAASPLRRFTPAGQD 541 (639)
T ss_dssp SCTTSBCCCCEEEE---TTTCCEEEGGGGCCSSSCEEEEEEC-CTTTTTCTTSH-HHHHHHHHHHCTTCHHHHHSCTTSC
T ss_pred CCCcCCCCCCeEEe---cCCCCEEEHHHhhccCCCEEEEEec-CCCCchhhHHH-HHHHHHHHhhCCccHHHhcCCCCCC
Confidence 56899999999861 24788999999774 688888874 43334343 22 333333221 2211
Q ss_pred -CC-CCeEEEEEcCCHHH---------HHHHHHhCCCCCceEEEEcC---C-chHHHHcCCccccccCCCCccceeEEEE
Q 038822 69 -KG-VDEILCISVNDPFV---------MKAWAKTFPKNKSVKFLADG---S-AKYTHALGLELDLSEKGLGTQSRRFALL 133 (162)
Q Consensus 69 -~~-~~~v~~is~d~~~~---------~~~~~~~~~~~~~~~~l~D~---~-~~~~~~~gv~~~~~~~~~~~~~~~~~~i 133 (162)
.+ + .++.|...+... +..+..++++..-..++.|. . +.+++.||+.-+ ....+|
T Consensus 542 ~~~~~-~~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~~----------~g~~v~ 610 (639)
T 2dkh_A 542 IDSIF-DLRAVFPQAYTEVALETLPALLLPPKGQLGMIDYEKVFSPDLKNAGQDIFELRGIDRQ----------QGALVV 610 (639)
T ss_dssp TTSSE-EEEEECSSCGGGCCGGGSCGGGSCEETTTTEECCCSEEECCCSSTTCCHHHHTTBCTT----------TCEEEE
T ss_pred cCceE-EEEEEecCCCCccchhhCcHhhCCcccccccccceeEEeCCCcccccchHHHhCCCCC----------ceEEEE
Confidence 11 3 566664432111 11111111210012356773 2 669999997410 123678
Q ss_pred Ec-CCeEEEEEe
Q 038822 134 VD-DLKVKAANV 144 (162)
Q Consensus 134 i~-~g~i~~~~~ 144 (162)
+. ||-|-++..
T Consensus 611 vRPD~yv~~~~~ 622 (639)
T 2dkh_A 611 VRPDQYVAQVLP 622 (639)
T ss_dssp ECTTSBEEEEEC
T ss_pred ECCCCceEEeec
Confidence 88 999887764
No 284
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=88.96 E-value=0.21 Score=32.81 Aligned_cols=10 Identities=20% Similarity=0.664 Sum_probs=8.4
Q ss_pred eCCCCCCCCc
Q 038822 44 PGDFTPTCSL 53 (162)
Q Consensus 44 ~~~~cp~C~~ 53 (162)
..+|||.|.+
T Consensus 43 ~~~~Cp~C~~ 52 (129)
T 3ctg_A 43 AKTYCPYCKA 52 (129)
T ss_dssp ECTTCHHHHH
T ss_pred ECCCCCchHH
Confidence 3789999987
No 285
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=88.71 E-value=0.24 Score=32.59 Aligned_cols=64 Identities=6% Similarity=-0.002 Sum_probs=43.8
Q ss_pred EEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC----CHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCc
Q 038822 41 FGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN----DPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLE 115 (162)
Q Consensus 41 ~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d----~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 115 (162)
.+|...+||.|.+. ...| ++.|+ .+-.+..+ +.+.++++++..+. ++.-+.+..+..++.++..
T Consensus 4 ~lY~~~~C~~C~ka-~~~L-------~~~gi-~y~~~di~~~~~~~~el~~~l~~~~~--~~~~l~n~~~~~~k~l~~~ 71 (132)
T 1z3e_A 4 TLYTSPSCTSCRKA-RAWL-------EEHEI-PFVERNIFSEPLSIDEIKQILRMTED--GTDEIISTRSKVFQKLNVN 71 (132)
T ss_dssp EEEECTTCHHHHHH-HHHH-------HHTTC-CEEEEETTTSCCCHHHHHHHHHTCSS--CGGGTBCTTSHHHHHHCCC
T ss_pred EEEeCCCChHHHHH-HHHH-------HHcCC-ceEEEEccCCCccHHHHHHHHHHcCC--CHHHhhcCCchHHHhcCcc
Confidence 34557889999985 4333 34577 66565553 45788899988776 6655667778888887754
No 286
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=88.08 E-value=0.1 Score=36.60 Aligned_cols=47 Identities=15% Similarity=0.162 Sum_probs=31.4
Q ss_pred ehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHH---HHhHHHHHhCCCCeEEEEE
Q 038822 28 SVHSLAAGKKVILFGVPGDFTPTCSLKHVPGF---IEKADELQSKGVDEILCIS 78 (162)
Q Consensus 28 ~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l---~~~~~~~~~~~~~~v~~is 78 (162)
.|+.-..+++.|+.|+ ..+||+|..- -+.+ .++.+++.+ ++ .++-+.
T Consensus 14 ~l~~p~~~~~~vvef~-d~~Cp~C~~~-~~~l~~~~~l~~~~~~-~v-~~~~~~ 63 (191)
T 3l9s_A 14 TLDKPVAGEPQVLEFF-SFYCPHCYQF-EEVLHVSDNVKKKLPE-GT-KMTKYH 63 (191)
T ss_dssp ECSSCCCSSSCEEEEE-CTTCHHHHHH-HHTSCHHHHHHHHSCT-TC-CEEEEE
T ss_pred EcCCCCCCCCeEEEEE-CCCChhHHHh-ChhccchHHHHHhCCC-Cc-EEEEEe
Confidence 4443335677777777 7889999995 6776 577777654 35 555444
No 287
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=87.65 E-value=0.14 Score=33.29 Aligned_cols=65 Identities=18% Similarity=0.082 Sum_probs=45.3
Q ss_pred EEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEc----CCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCc
Q 038822 40 LFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISV----NDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLE 115 (162)
Q Consensus 40 l~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~----d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 115 (162)
+.+|...+||.|++. ... +++.|+ .+-.+.. .+.+.+.+|++..|. ++.-+.+..+...+.+++.
T Consensus 6 i~iY~~p~C~~c~ka-~~~-------L~~~gi-~~~~~di~~~~~~~~eL~~~l~~~g~--~~~~l~n~~~~~~k~l~l~ 74 (120)
T 3gkx_A 6 TLFLQYPACSTCQKA-KKW-------LIENNI-EYTNRLIVDDNPTVEELKAWIPLSGL--PVKKFFNTSGVVYKELKLS 74 (120)
T ss_dssp CEEEECTTCHHHHHH-HHH-------HHHTTC-CCEEEETTTTCCCHHHHHHHHHHHTS--CGGGGBCTTSHHHHHTTHH
T ss_pred EEEEECCCChHHHHH-HHH-------HHHcCC-ceEEEecccCcCCHHHHHHHHHHcCC--CHHHeEeCCCchhhhcCcc
Confidence 345556789999995 433 344566 5555544 367899999999987 6666677778888888754
No 288
>3fhk_A UPF0403 protein YPHP; disulfide isomerase, thioredoxin superfamily, CXC motif, structural genomics, surface entropy reduction, Ser, PSI-2; 2.30A {Bacillus subtilis}
Probab=87.42 E-value=4.2 Score=27.11 Aligned_cols=57 Identities=16% Similarity=0.145 Sum_probs=36.3
Q ss_pred eEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEcCCeEEEEEeecCCcceeCCHHHHHhc
Q 038822 98 VKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVDDLKVKAANVESGGDFTVSSADDILKS 161 (162)
Q Consensus 98 ~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~~g~i~~~~~~~~~~~~~~~~~~il~~ 161 (162)
..++...|.+...+..-+.. + -.|++|++-+++||++++..-- .++..+.+++|.+.
T Consensus 82 vTVFAGqDkEAt~~aR~yf~----~-~pPSSPS~ALfKdGelVh~ieR--h~IEGr~a~~Ia~~ 138 (147)
T 3fhk_A 82 VTVFAGQDKEATAKMREYFT----G-AAPSSPSMALLKGKEVVHFIPR--HEIEGHDMEEIMKN 138 (147)
T ss_dssp EEEETTTSHHHHHHHHTTST----T-CCCCSSEEEEEETTEEEEEECG--GGTTTSCHHHHHHH
T ss_pred EEeccCCCHHHHHHHHHhcC----C-CCCCCchheeeeCCEEEEEeeh--hhcCCCCHHHHHHH
Confidence 56777788655443322221 1 2467788999999999988742 33334777777654
No 289
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=86.93 E-value=0.18 Score=31.98 Aligned_cols=41 Identities=20% Similarity=0.213 Sum_probs=23.3
Q ss_pred hhhcCCCeEEEEEeeC----CCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC
Q 038822 30 HSLAAGKKVILFGVPG----DFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN 80 (162)
Q Consensus 30 ~~~~~gk~vvl~f~~~----~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d 80 (162)
.++.+..+++|+.- + .|||.|.+- ...| ++.|+ .+-.+..+
T Consensus 12 ~~~i~~~~Vvvy~k-~t~~~p~Cp~C~~a-k~~L-------~~~gi-~~~~~dI~ 56 (109)
T 3ipz_A 12 EKLVNSEKVVLFMK-GTRDFPMCGFSNTV-VQIL-------KNLNV-PFEDVNIL 56 (109)
T ss_dssp HHHHTSSSEEEEES-BCSSSBSSHHHHHH-HHHH-------HHTTC-CCEEEEGG
T ss_pred HHHHccCCEEEEEe-cCCCCCCChhHHHH-HHHH-------HHcCC-CcEEEECC
Confidence 34445566666544 4 389999884 3333 33466 55556653
No 290
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=85.97 E-value=0.27 Score=32.67 Aligned_cols=55 Identities=11% Similarity=0.108 Sum_probs=29.8
Q ss_pred CCeEEEEEeeC----CCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC-CHHHHHHHHHhCCCCCceEE
Q 038822 35 GKKVILFGVPG----DFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN-DPFVMKAWAKTFPKNKSVKF 100 (162)
Q Consensus 35 gk~vvl~f~~~----~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d-~~~~~~~~~~~~~~~~~~~~ 100 (162)
..+++|+.. + .|||.|.+- ...| ++.++ .+-.+..+ +++...++.+..+. .++|.
T Consensus 34 ~~~Vvvy~k-s~~~~~~Cp~C~~a-k~~L-------~~~gv-~y~~vdI~~d~~~~~~L~~~~G~-~tvP~ 93 (135)
T 2wci_A 34 ENPILLYMK-GSPKLPSCGFSAQA-VQAL-------AACGE-RFAYVDILQNPDIRAELPKYANW-PTFPQ 93 (135)
T ss_dssp HCSEEEEES-BCSSSBSSHHHHHH-HHHH-------HTTCS-CCEEEEGGGCHHHHHHHHHHHTC-CSSCE
T ss_pred cCCEEEEEE-ecCCCCCCccHHHH-HHHH-------HHcCC-ceEEEECCCCHHHHHHHHHHHCC-CCcCE
Confidence 345666554 4 689999984 4333 33466 66666664 34444444444443 24443
No 291
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=85.91 E-value=0.32 Score=31.56 Aligned_cols=23 Identities=17% Similarity=0.108 Sum_probs=14.5
Q ss_pred hhcCCCeEEEEEeeC----CCCCCCCcC
Q 038822 31 SLAAGKKVILFGVPG----DFTPTCSLK 54 (162)
Q Consensus 31 ~~~~gk~vvl~f~~~----~~cp~C~~~ 54 (162)
++.+..+++|+.- + .|||+|.+-
T Consensus 11 ~~i~~~~Vvvfsk-~t~~~p~Cp~C~~a 37 (121)
T 3gx8_A 11 DAIESAPVVLFMK-GTPEFPKCGFSRAT 37 (121)
T ss_dssp HHHHSCSEEEEES-BCSSSBCTTHHHHH
T ss_pred HHhccCCEEEEEe-ccCCCCCCccHHHH
Confidence 3334556666654 4 389999884
No 292
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=83.70 E-value=0.2 Score=33.56 Aligned_cols=65 Identities=15% Similarity=0.016 Sum_probs=44.4
Q ss_pred EEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEc----CCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCcc
Q 038822 41 FGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISV----NDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLEL 116 (162)
Q Consensus 41 ~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~----d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~ 116 (162)
.+|...+|+.|++. ... +++.|+ .+-.+.. .+.+.+.++....++ +..-+.+..+..++.+++..
T Consensus 5 tiY~~p~C~~crka-k~~-------L~~~gi-~~~~idi~~~~~~~~eL~~~~~~~g~--p~~~l~n~~~~~yk~l~l~~ 73 (141)
T 1s3c_A 5 TIYHNPASGTSRNT-LEM-------IRNSGT-EPTIILYLENPPSRDELVKLIADMGI--SVRALLRKNVEPYEQLGLAE 73 (141)
T ss_dssp EEECCTTCHHHHHH-HHH-------HHHTTC-CCEEECTTTSCCCHHHHHHHHHHHTS--CHHHHBCSSSHHHHHTTTTS
T ss_pred EEEECCCChHHHHH-HHH-------HHHcCC-CEEEEECCCCCccHHHHHHHhcccCC--CHHHhccCCchhHHhcCCcc
Confidence 35557789999985 433 344666 5555544 257888999999887 65555567788888887653
No 293
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=83.63 E-value=4.1 Score=26.28 Aligned_cols=55 Identities=13% Similarity=0.030 Sum_probs=39.3
Q ss_pred hhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCC
Q 038822 31 SLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPK 94 (162)
Q Consensus 31 ~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~ 94 (162)
+|+++.++||.+=.- + + -..+..+.+.+++.|+ .+++|...+.+.+++.....|+
T Consensus 43 ~FF~~aPVVlDl~~l---~----~-~~dl~~L~~~l~~~gl-~~vGV~g~~~~~~~~~a~~~GL 97 (120)
T 3ghf_A 43 AFLKHAPVVINVSGL---E----S-PVNWPELHKIVTSTGL-RIIGVSGCKDASLKVEIDRMGL 97 (120)
T ss_dssp HHHTTCEEEEEEEEC---C----S-SCCHHHHHHHHHTTTC-EEEEEESCCCHHHHHHHHHHTC
T ss_pred HhhCCCcEEEEcccc---C----C-hHHHHHHHHHHHHcCC-EEEEEeCCCcHHHHHHHHHCCC
Confidence 345788998887532 1 1 1346677777888899 9999998776767778887765
No 294
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=83.05 E-value=1.8 Score=30.70 Aligned_cols=43 Identities=12% Similarity=0.173 Sum_probs=27.6
Q ss_pred CCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC
Q 038822 35 GKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN 80 (162)
Q Consensus 35 gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d 80 (162)
+.+.++.+|...||+.|... ++.+.+.+++++++ + .++.+..+
T Consensus 130 ~~~~~~l~f~~~~~~~~~~~-~~~~~~vAk~~k~~-i-~F~~vd~~ 172 (227)
T 4f9z_D 130 VIQIHLLLIMNKASPEYEEN-MHRYQKAAKLFQGK-I-LFILVDSG 172 (227)
T ss_dssp SCCEEEEEEECTTSTTHHHH-HHHHHHHHHHTTTT-C-EEEEEETT
T ss_pred CCceEEEEEEcCCcchHHHH-HHHHHHHHHHhhCC-E-EEEEeCCc
Confidence 33455554545678888775 78888888877654 5 55555544
No 295
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=83.03 E-value=0.21 Score=34.06 Aligned_cols=40 Identities=13% Similarity=0.112 Sum_probs=28.4
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEE
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCI 77 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~i 77 (162)
.++++|+.|+ ...||+|..- -+.+.++.+++.+. + .+.-+
T Consensus 20 ~~~~~vvEf~-dy~Cp~C~~~-~~~~~~l~~~~~~~-~-~~~~~ 59 (184)
T 4dvc_A 20 SSSPVVSEFF-SFYCPHCNTF-EPIIAQLKQQLPEG-A-KFQKN 59 (184)
T ss_dssp CSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHTSCTT-C-EEEEE
T ss_pred CCCCEEEEEE-CCCCHhHHHH-hHHHHHHHhhcCCc-e-EEEEE
Confidence 4677888888 5779999996 67787877776543 3 44433
No 296
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=82.15 E-value=0.27 Score=31.90 Aligned_cols=66 Identities=9% Similarity=0.020 Sum_probs=45.1
Q ss_pred EEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEc----CCHHHHHHHHHhCCCCCc-eEEEEcCCchHHHHcCC
Q 038822 40 LFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISV----NDPFVMKAWAKTFPKNKS-VKFLADGSAKYTHALGL 114 (162)
Q Consensus 40 l~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~----d~~~~~~~~~~~~~~~~~-~~~l~D~~~~~~~~~gv 114 (162)
+.+|....|+.|++. ...| ++.|+ .+-.+.. -+.+.+++|++..|+ + ..-+.+..+..++.++.
T Consensus 6 i~iY~~p~C~~c~ka-~~~L-------~~~gi-~~~~~di~~~~~t~~eL~~~l~~~g~--~~~~~l~n~~~~~~k~l~l 74 (119)
T 3f0i_A 6 VVIYHNPKCSKSRET-LALL-------ENQGI-APQVIKYLETSPSVEELKRLYQQLGL--NEVRAMMRCKEELYKELNL 74 (119)
T ss_dssp CEEECCTTCHHHHHH-HHHH-------HHTTC-CCEEECHHHHCCCHHHHHHHHHHHTC--SSGGGGBCTTSHHHHHTTT
T ss_pred EEEEECCCChHHHHH-HHHH-------HHcCC-ceEEEEeccCcCcHHHHHHHHHHcCC--ccHHHHhcCCCchhhhcCc
Confidence 345556779999985 4333 34566 5544433 478899999999987 5 54566677888888876
Q ss_pred cc
Q 038822 115 EL 116 (162)
Q Consensus 115 ~~ 116 (162)
..
T Consensus 75 ~~ 76 (119)
T 3f0i_A 75 GD 76 (119)
T ss_dssp TC
T ss_pred cc
Confidence 53
No 297
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=81.21 E-value=0.65 Score=29.97 Aligned_cols=26 Identities=19% Similarity=0.208 Sum_probs=15.9
Q ss_pred ehhhhcCCCeEEEEEeeC----CCCCCCCcC
Q 038822 28 SVHSLAAGKKVILFGVPG----DFTPTCSLK 54 (162)
Q Consensus 28 ~l~~~~~gk~vvl~f~~~----~~cp~C~~~ 54 (162)
.+.++.+..+++|+.- + .|||+|.+-
T Consensus 12 ~v~~~i~~~~Vvvfsk-~t~~~p~Cp~C~~a 41 (118)
T 2wem_A 12 QLDALVKKDKVVVFLK-GTPEQPQCGFSNAV 41 (118)
T ss_dssp HHHHHHHHSSEEEEES-BCSSSBSSHHHHHH
T ss_pred HHHHHhccCCEEEEEe-cCCCCCccHHHHHH
Confidence 3455545556666554 4 389999884
No 298
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=80.56 E-value=0.59 Score=34.88 Aligned_cols=38 Identities=11% Similarity=0.337 Sum_probs=25.4
Q ss_pred CCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEE
Q 038822 35 GKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCIS 78 (162)
Q Consensus 35 gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is 78 (162)
|+.+|+.|+ -..||+|++. .+.+.+..+ +..+ .++.+.
T Consensus 147 gk~~I~vFt-Dp~CPYCkkl-~~~l~~~l~---~~~V-r~i~~P 184 (273)
T 3tdg_A 147 KDKILYIVS-DPMCPHCQKE-LTKLRDHLK---ENTV-RMVVVG 184 (273)
T ss_dssp TTCEEEEEE-CTTCHHHHHH-HHTHHHHHH---HCEE-EEEECC
T ss_pred CCeEEEEEE-CcCChhHHHH-HHHHHHHhh---CCcE-EEEEee
Confidence 556666666 6779999997 788886654 3344 444443
No 299
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=79.78 E-value=1.2 Score=28.43 Aligned_cols=61 Identities=10% Similarity=-0.045 Sum_probs=38.0
Q ss_pred EEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC----CHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCC
Q 038822 41 FGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN----DPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGL 114 (162)
Q Consensus 41 ~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d----~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 114 (162)
.+|...+||.|++. ... +++.|+ .+-.+... +.+.+++|+++.|+ .-+.+..+...+.++.
T Consensus 3 ~iY~~~~C~~C~ka-k~~-------L~~~gi-~~~~~di~~~~~~~~~l~~~~~~~g~----~~l~n~~~~~~k~l~~ 67 (114)
T 1rw1_A 3 VLYGIKACDTMKKA-RTW-------LDEHKV-AYDFHDYKAVGIDREHLRRWCAEHGW----QTVLNRAGTTFRKLDE 67 (114)
T ss_dssp EEEECSSCHHHHHH-HHH-------HHHTTC-CEEEEEHHHHCCCHHHHHHHHHHHCH----HHHBCTTSHHHHTSCH
T ss_pred EEEECCCChHHHHH-HHH-------HHHCCC-ceEEEeecCCCCCHHHHHHHHHhCCh----HHhccCCcHhHHhcCc
Confidence 34557789999985 433 344677 66666552 45888889987763 2233455666666654
No 300
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=79.53 E-value=0.71 Score=31.68 Aligned_cols=41 Identities=10% Similarity=0.053 Sum_probs=29.4
Q ss_pred CCeEEEEEeeCCCCCCCCcCCHhHH-HHhHHHHHhCCCCeEEEEEc
Q 038822 35 GKKVILFGVPGDFTPTCSLKHVPGF-IEKADELQSKGVDEILCISV 79 (162)
Q Consensus 35 gk~vvl~f~~~~~cp~C~~~~~~~l-~~~~~~~~~~~~~~v~~is~ 79 (162)
++.+++.|| ...||.|..- .+.+ .++.+++.. .+ .+..+..
T Consensus 17 ~~~~~ief~-d~~CP~C~~~-~~~l~~~l~~~~~~-~v-~~~~~~l 58 (195)
T 3c7m_A 17 ADKTLIKVF-SYACPFCYKY-DKAVTGPVSEKVKD-IV-AFTPFHL 58 (195)
T ss_dssp CTTEEEEEE-CTTCHHHHHH-HHHTHHHHHHHTTT-TC-EEEEEEC
T ss_pred CCcEEEEEE-eCcCcchhhC-cHHHHHHHHHhCCC-ce-EEEEEec
Confidence 455777777 5899999996 7888 777776653 35 6665553
No 301
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=79.51 E-value=0.69 Score=23.09 Aligned_cols=20 Identities=15% Similarity=0.212 Sum_probs=16.8
Q ss_pred CCCCCcCCHhHHHHhHHHHHh
Q 038822 48 TPTCSLKHVPGFIEKADELQS 68 (162)
Q Consensus 48 cp~C~~~~~~~l~~~~~~~~~ 68 (162)
||.|.++ +.....+..-|++
T Consensus 8 CP~C~~~-l~s~~~L~~Hye~ 27 (34)
T 3mjh_B 8 CPQCMKS-LGSADELFKHYEA 27 (34)
T ss_dssp CTTTCCE-ESSHHHHHHHHHH
T ss_pred CcHHHHH-cCCHHHHHHHHHh
Confidence 9999997 8888888777764
No 302
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=79.36 E-value=5.4 Score=29.63 Aligned_cols=52 Identities=8% Similarity=0.043 Sum_probs=32.5
Q ss_pred EEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcC--C-------------HHHHHHHHHhCCC
Q 038822 38 VILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVN--D-------------PFVMKAWAKTFPK 94 (162)
Q Consensus 38 vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d--~-------------~~~~~~~~~~~~~ 94 (162)
+.|..|.+.+||.|..- -..|.++..+ .++ ..+.+..+ + .+..+.+.+++|.
T Consensus 44 ~~VelyTs~gCp~C~~A-k~lL~~~~~~---~~v-i~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~ 110 (270)
T 2axo_A 44 GVVELFTSQGCASCPPA-DEALRKMIQK---GDV-VGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGR 110 (270)
T ss_dssp CEEEEEECTTCTTCHHH-HHHHHHHHHH---TSS-EEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTC
T ss_pred cEEEEEeCCCCCChHHH-HHHHHHhhcc---CCe-eeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCC
Confidence 66777778999999995 5556565443 344 34455532 2 3345557777764
No 303
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=74.27 E-value=2.2 Score=27.29 Aligned_cols=61 Identities=13% Similarity=-0.034 Sum_probs=38.9
Q ss_pred EEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEc----CCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCC
Q 038822 41 FGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISV----NDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGL 114 (162)
Q Consensus 41 ~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~----d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 114 (162)
.+|...+||.|++. ...|. +.|+ .+-.+.. .+.+.++++.++.|+ .-+.+..+..++.++.
T Consensus 8 ~iY~~~~C~~C~ka-~~~L~-------~~gi-~y~~~di~~~~~~~~~l~~~~~~~g~----~~l~n~~~~~~k~l~~ 72 (120)
T 2kok_A 8 TIYGIKNCDTMKKA-RIWLE-------DHGI-DYTFHDYKKEGLDAETLDRFLKTVPW----EQLLNRAGTTFRKLPE 72 (120)
T ss_dssp EEEECSSCHHHHHH-HHHHH-------HHTC-CEEEEEHHHHCCCHHHHHHHHHHSCG----GGTBCSSSHHHHHSCH
T ss_pred EEEECCCChHHHHH-HHHHH-------HcCC-cEEEEeeeCCCCCHHHHHHHHHHcCh----HhhccCCchhhHhcCc
Confidence 34556789999885 43333 3466 5555544 245888899988874 1234566777777764
No 304
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=73.74 E-value=2.3 Score=34.54 Aligned_cols=38 Identities=16% Similarity=0.190 Sum_probs=30.4
Q ss_pred ceEEEEcCCchHHHHcCCccccccCCCCccceeEEEEEc-CCeEEEEEee
Q 038822 97 SVKFLADGSAKYTHALGLELDLSEKGLGTQSRRFALLVD-DLKVKAANVE 145 (162)
Q Consensus 97 ~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii~-~g~i~~~~~~ 145 (162)
.+.++.|.+..+.+.|||. .+|+ .++++ +|++....+.
T Consensus 186 ~v~~v~~~~~~l~~kfgV~--------~~Ps---lvl~~~nGk~~~~~v~ 224 (519)
T 3t58_A 186 AVRRVLNTESDLVNKFGVT--------DFPS---CYLLLRNGSVSRVPVL 224 (519)
T ss_dssp EEEEEETTCHHHHHHHTCC--------CSSE---EEEEETTSCEEECCCS
T ss_pred eEEEecCchHHHHHHcCCC--------CCCe---EEEEeCCCceeecccc
Confidence 6788888889999999997 4554 78888 9998777643
No 305
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=73.50 E-value=0.58 Score=30.66 Aligned_cols=63 Identities=10% Similarity=-0.016 Sum_probs=30.3
Q ss_pred hhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCC-eEEEEEcC-CHHHHHHHHHh-CCCCCceEEE
Q 038822 31 SLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVD-EILCISVN-DPFVMKAWAKT-FPKNKSVKFL 101 (162)
Q Consensus 31 ~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~-~v~~is~d-~~~~~~~~~~~-~~~~~~~~~l 101 (162)
++.+..+++|+. .+|||.|.+- ..-|.+. ...++. .++-|..+ +.+..++++++ .|. .++|.+
T Consensus 9 ~ii~~~~Vvvys--k~~Cp~C~~a-k~lL~~~----~~~~v~~~~idid~~~d~~~~~~~l~~~~G~-~tVP~I 74 (127)
T 3l4n_A 9 LILDLSPIIIFS--KSTCSYSKGM-KELLENE----YQFIPNYYIIELDKHGHGEELQEYIKLVTGR-GTVPNL 74 (127)
T ss_dssp HHHTSCSEEEEE--CTTCHHHHHH-HHHHHHH----EEEESCCEEEEGGGSTTHHHHHHHHHHHHSC-CSSCEE
T ss_pred HHHccCCEEEEE--cCCCccHHHH-HHHHHHh----cccCCCcEEEEecCCCCHHHHHHHHHHHcCC-CCcceE
Confidence 333445554444 6899999984 4333331 111330 34444433 34556665544 343 245533
No 306
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=70.15 E-value=1.9 Score=30.86 Aligned_cols=8 Identities=25% Similarity=0.397 Sum_probs=3.8
Q ss_pred CCCCCCCc
Q 038822 46 DFTPTCSL 53 (162)
Q Consensus 46 ~~cp~C~~ 53 (162)
.|||.|.+
T Consensus 178 ~~Cp~C~~ 185 (241)
T 1nm3_A 178 PGCPFCAK 185 (241)
T ss_dssp SSCHHHHH
T ss_pred CCChHHHH
Confidence 34555544
No 307
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=69.74 E-value=2.6 Score=24.87 Aligned_cols=34 Identities=21% Similarity=0.517 Sum_probs=25.2
Q ss_pred CCCeEEEEEeeCCCCCCCCcC-----CHhHHHHhHHHHH
Q 038822 34 AGKKVILFGVPGDFTPTCSLK-----HVPGFIEKADELQ 67 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~-----~~~~l~~~~~~~~ 67 (162)
+|+.++|--.++.+|+.|-.. .+..+.++..+|+
T Consensus 25 ~G~~~~I~~Vp~~~C~~CGE~~~~~e~~~~~~~~~~~f~ 63 (78)
T 3ga8_A 25 RGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 63 (78)
T ss_dssp TTEEEEEEEEEEEEETTTCCEECCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCceeEECCCCCCEEECHHHHHHHHHHHHHHH
Confidence 888888888899999999763 1444556666665
No 308
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=69.28 E-value=1.2 Score=30.78 Aligned_cols=38 Identities=5% Similarity=-0.113 Sum_probs=25.0
Q ss_pred eEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEE
Q 038822 37 KVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILC 76 (162)
Q Consensus 37 ~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~ 76 (162)
++.|..|....||.|.+- .+.+.++.+++....+ .++.
T Consensus 15 ~vtiv~f~D~~Cp~C~~~-~~~~~~~l~~~~~g~v-~~v~ 52 (182)
T 3gn3_A 15 PRLFEVFLEPTCPFSVKA-FFKLDDLLAQAGEDNV-TVRI 52 (182)
T ss_dssp SEEEEEEECTTCHHHHHH-HTTHHHHHHHHCTTTE-EEEE
T ss_pred CEEEEEEECCCCHhHHHH-HHHHHHHHHHhCCCCE-EEEE
Confidence 355555557789999995 7888887777522235 5554
No 309
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=67.75 E-value=7.2 Score=32.53 Aligned_cols=122 Identities=15% Similarity=0.109 Sum_probs=68.6
Q ss_pred CCCCCCCCCeeeeeeecCCCceeEehhhhcC--CCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHh-------------
Q 038822 4 IAVGDPLPDGTLVYFDEQDQLQQVSVHSLAA--GKKVILFGVPGDFTPTCSLKHVPGFIEKADELQS------------- 68 (162)
Q Consensus 4 l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~--gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~------------- 68 (162)
+.+|..+|++.+.. ..+|++++|.+.++ |++++|.|- +.-. ...+ ...+.++.+.+..
T Consensus 479 ~~~G~r~p~~~~~~---~~~g~~~~l~~~l~~~g~~~ll~~~-~~~~--~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~ 551 (665)
T 1pn0_A 479 CVVGTRFKSQPVVR---HSEGLWMHFGDRLVTDGRFRIIVFA-GKAT--DATQ-MSRIKKFAAYLDSENSVISRYTPKGA 551 (665)
T ss_dssp SCTTSBCCCCEEEE---TTTTEEEEGGGGCCCSSCEEEEEEE-ECTT--SHHH-HHHHHHHHHHHHSTTSHHHHHSBTTS
T ss_pred CCCcCCCCCCeEEe---cCCCcEEEHhHhhccCCCEEEEEec-CCcc--cchh-HHHHHHHHHHhhccccHHhhcCCccc
Confidence 57899999999861 24788999999764 688888875 3211 1122 3445555554431
Q ss_pred ---CCCCeEEEEEcCCHHHH--HHHHH-hC--CCCCceEEEEc------CCchHHHHcCCccccccCCCCccceeEEEEE
Q 038822 69 ---KGVDEILCISVNDPFVM--KAWAK-TF--PKNKSVKFLAD------GSAKYTHALGLELDLSEKGLGTQSRRFALLV 134 (162)
Q Consensus 69 ---~~~~~v~~is~d~~~~~--~~~~~-~~--~~~~~~~~l~D------~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ii 134 (162)
.-+ .++.|........ ..+-. -+ +.. -..++.| +++.+++.||+.-+ .-..+|+
T Consensus 552 ~~~~~~-~~~~i~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~g~~~~----------~g~~vlv 619 (665)
T 1pn0_A 552 DRNSRI-DVITIHSCHRDDIEMHDFPAPALHPKWQ-YDFIYADCDSWHHPHPKSYQAWGVDET----------KGAVVVV 619 (665)
T ss_dssp CTTSSE-EEEEEESSCTTSCCGGGSCTTTTSCTTC-CSSEEECSCCSSSCCCCHHHHHTBCTT----------TCEEEEE
T ss_pred Ccccee-EEEEEecCCCCccchhhCCHHHcCcccc-hheEeecCcccccccccHHHHcCCCCC----------CceEEEE
Confidence 124 6666744321110 00000 00 110 1235667 35779999997410 1236788
Q ss_pred c-CCeEEEEEe
Q 038822 135 D-DLKVKAANV 144 (162)
Q Consensus 135 ~-~g~i~~~~~ 144 (162)
. ||-|-++..
T Consensus 620 RPD~yV~~~~~ 630 (665)
T 1pn0_A 620 RPDGYTSLVTD 630 (665)
T ss_dssp CTTSBEEEEEC
T ss_pred CCCCcEEEEec
Confidence 7 999988764
No 310
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=64.42 E-value=7.2 Score=24.69 Aligned_cols=39 Identities=15% Similarity=0.235 Sum_probs=26.3
Q ss_pred EEEEeeCCCCC--CCCc----CCHhHHHHhHHHHHhCCCCeEEEEEc
Q 038822 39 ILFGVPGDFTP--TCSL----KHVPGFIEKADELQSKGVDEILCISV 79 (162)
Q Consensus 39 vl~f~~~~~cp--~C~~----~~~~~l~~~~~~~~~~~~~~v~~is~ 79 (162)
+-.|=|+-||+ +|-. + +-++....+.++++|+ .|-=.+.
T Consensus 7 i~ifepamCCstGvCG~~vd~e-L~~~~~~~~~lk~~Gi-~V~RyNL 51 (106)
T 3ktb_A 7 IEIFDPAMCCPTGLCGTNINPE-LMRIAVVIESLKKQGI-IVTRHNL 51 (106)
T ss_dssp EEEEECSCSSTTSCSSSCCCHH-HHHHHHHHHHHHHTTC-CCEEEET
T ss_pred EEEechhhccCCCCcCCCCCHH-HHHHHHHHHHHHHCCC-EEEEEcc
Confidence 55677888888 4533 4 6667777888888887 5554443
No 311
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=63.93 E-value=3.1 Score=26.80 Aligned_cols=66 Identities=8% Similarity=0.021 Sum_probs=42.3
Q ss_pred EEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEc----CCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCc
Q 038822 40 LFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISV----NDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLE 115 (162)
Q Consensus 40 l~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~----d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 115 (162)
+.+|...+||.|++. ... +++.|+ .+-.+.. -+.+.+++|++..|+. +..=+.+..+..++.++..
T Consensus 7 i~iY~~p~C~~c~ka-~~~-------L~~~gi-~~~~~di~~~~~~~~eL~~~l~~~g~~-~~~~l~n~~~~~~k~l~l~ 76 (121)
T 3rdw_A 7 VTIYHNPRCSKSRET-LAL-------VEQQGI-TPQVVLYLETPPSVDKLKELLQQLGFS-DARQLMRTKEDLYKTLNLD 76 (121)
T ss_dssp CEEECCTTCHHHHHH-HHH-------HHTTTC-CCEEECTTTSCCCHHHHHHHHHHTTCS-SGGGGBCTTSHHHHHTTTT
T ss_pred EEEEECCCCHHHHHH-HHH-------HHHcCC-CcEEEeeccCCCcHHHHHHHHHhcCCc-CHHHHhcCCChhhhhcCcc
Confidence 345556779999985 433 345666 5555543 3678999999998741 1112455677788888765
No 312
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B* 2kz8_A
Probab=63.59 E-value=17 Score=23.21 Aligned_cols=66 Identities=17% Similarity=0.305 Sum_probs=43.2
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhH------HHHhHHHHH-hCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCCc
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPG------FIEKADELQ-SKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGSA 106 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~------l~~~~~~~~-~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~ 106 (162)
+|+.+++.-.++.+|+.|-.+ +-. +.+...++. .... ..-+++.++++.++.++ ...
T Consensus 25 kg~~~~v~~v~~~~C~~CGE~-~~d~e~~~~~~~~~~e~~r~~~~------~~~~~~~l~~~R~~~gl---------sq~ 88 (133)
T 3o9x_A 25 RGRKTVLKGIHGLYCVHCEES-IMNKEESDAFMAQVKAFRASVNA------ETVAPEFIVKVRKKLSL---------TQK 88 (133)
T ss_dssp TTEEEEEEEEEEEEESSSSCE-ECCHHHHHHHHHHHHHHHHHHHT------TTCCHHHHHHHHHHTTC---------CHH
T ss_pred CCEEEEECCCceeECCCCCCE-eecHHHHHHHHHHHHHHHHHHhh------cCCCHHHHHHHHHHcCC---------CHH
Confidence 788777776678899999875 432 222222222 1110 11257889999999998 457
Q ss_pred hHHHHcCCc
Q 038822 107 KYTHALGLE 115 (162)
Q Consensus 107 ~~~~~~gv~ 115 (162)
++++.+|+.
T Consensus 89 ~la~~~g~s 97 (133)
T 3o9x_A 89 EASEIFGGG 97 (133)
T ss_dssp HHHHHHCSC
T ss_pred HHHHHHCCC
Confidence 899999886
No 313
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=62.53 E-value=5.2 Score=27.82 Aligned_cols=35 Identities=14% Similarity=0.168 Sum_probs=23.1
Q ss_pred EEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEE
Q 038822 40 LFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCI 77 (162)
Q Consensus 40 l~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~i 77 (162)
|.+|...-||.|-.- .+.|.++.+++.. ++ .|.-.
T Consensus 5 I~~~~D~~CP~cy~~-~~~l~~l~~~~~~-~v-~v~~~ 39 (208)
T 3kzq_A 5 LYYVHDPMCSWCWGY-KPTIEKLKQQLPG-VI-QFEYV 39 (208)
T ss_dssp EEEEECTTCHHHHHH-HHHHHHHHHHSCT-TS-EEEEE
T ss_pred EEEEECCCCchhhhh-hHHHHHHHHhCCC-Cc-eEEEE
Confidence 344446679999886 7888888877742 45 55433
No 314
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=61.19 E-value=4.6 Score=33.07 Aligned_cols=35 Identities=17% Similarity=-0.001 Sum_probs=27.9
Q ss_pred CCCCCCCCCeeeeeeecCCCceeEehhhhcC-CCeEEEEE
Q 038822 4 IAVGDPLPDGTLVYFDEQDQLQQVSVHSLAA-GKKVILFG 42 (162)
Q Consensus 4 l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~-gk~vvl~f 42 (162)
+.+|..+||+.|. ..+|.+..|.++++ +++++|.|
T Consensus 445 ~~~G~r~pd~~l~----~~~g~~~~l~~~l~~~~~~ll~~ 480 (570)
T 3fmw_A 445 PWPGRFAGGLVLS----RPSGEPVPVAELLRSARPLLLDL 480 (570)
T ss_dssp SSTTCBCTTCEEC----CSTTCCEEHHHHSTTCCCEEECS
T ss_pred ccccCcCCCceee----cCCCcceeHHHHhcCCeEEEEEe
Confidence 5689999999998 66777789998875 56777765
No 315
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=61.17 E-value=3.3 Score=28.20 Aligned_cols=40 Identities=15% Similarity=0.150 Sum_probs=25.0
Q ss_pred CCeEEEEEeeCCCCCCCCcCCHhHHH-HhHHHHHh-CCCCeEEEE
Q 038822 35 GKKVILFGVPGDFTPTCSLKHVPGFI-EKADELQS-KGVDEILCI 77 (162)
Q Consensus 35 gk~vvl~f~~~~~cp~C~~~~~~~l~-~~~~~~~~-~~~~~v~~i 77 (162)
++..|+.|+ ..-||.|..- .+.+. .+.+++.+ .++ .++..
T Consensus 11 a~~~i~~f~-D~~Cp~C~~~-~~~l~~~l~~~~~~~~~v-~~~~~ 52 (186)
T 3bci_A 11 GKPLVVVYG-DYKCPYCKEL-DEKVMPKLRKNYIDNHKV-EYQFV 52 (186)
T ss_dssp CCCEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTTTTTSS-EEEEE
T ss_pred CCeEEEEEE-CCCChhHHHH-HHHHHHHHHHHhccCCeE-EEEEE
Confidence 344455554 7779999996 77774 56566653 246 66544
No 316
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=53.51 E-value=9.1 Score=26.49 Aligned_cols=36 Identities=11% Similarity=0.058 Sum_probs=22.1
Q ss_pred EEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEE
Q 038822 39 ILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCI 77 (162)
Q Consensus 39 vl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~i 77 (162)
.|.+|...-||.|-.. .+.+.++.+ +.+.++ .|.-.
T Consensus 9 ~I~~f~D~~CP~C~~~-~~~~~~l~~-~~~~~v-~v~~~ 44 (216)
T 2in3_A 9 VLWYIADPMCSWCWGF-APVIENIRQ-EYSAFL-TVKIM 44 (216)
T ss_dssp EEEEEECTTCHHHHHH-HHHHHHHHH-HHTTTC-EEEEE
T ss_pred eEEEEECCCCchhhcc-hHHHHHHHh-cCCCCe-EEEEe
Confidence 3445547779999974 666666665 444456 55433
No 317
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=52.58 E-value=3.3 Score=28.95 Aligned_cols=42 Identities=7% Similarity=0.067 Sum_probs=24.5
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHH-HHhHHHHHh-CCCCeEEEEE
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGF-IEKADELQS-KGVDEILCIS 78 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l-~~~~~~~~~-~~~~~v~~is 78 (162)
.++..|+.|+ ...||.|..- -+.+ ..+.+++.+ ..+ .++-..
T Consensus 28 ~a~vtvvef~-D~~CP~C~~~-~~~~~~~l~~~~~~~g~v-~~~~~~ 71 (202)
T 3gha_A 28 DAPVTVVEFG-DYKCPSCKVF-NSDIFPKIQKDFIDKGDV-KFSFVN 71 (202)
T ss_dssp TCSEEEEEEE-CTTCHHHHHH-HHHTHHHHHHHTTTTTSE-EEEEEE
T ss_pred CCCEEEEEEE-CCCChhHHHH-HHHhhHHHHHHhccCCeE-EEEEEe
Confidence 3555555555 6779999984 5655 344455543 235 555443
No 318
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=52.23 E-value=49 Score=22.00 Aligned_cols=59 Identities=17% Similarity=0.070 Sum_probs=41.5
Q ss_pred HhHHHHhHHHHHhCCCCeEEEEEcCC-HHHHHHHHHhCCCCCceEEE--E-cCC----chHHHHcCCc
Q 038822 56 VPGFIEKADELQSKGVDEILCISVND-PFVMKAWAKTFPKNKSVKFL--A-DGS----AKYTHALGLE 115 (162)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~v~~is~d~-~~~~~~~~~~~~~~~~~~~l--~-D~~----~~~~~~~gv~ 115 (162)
.+...++.++++++|+ .+..+|..+ ......+++..++..-|..+ . .++ ..+.+.+|+.
T Consensus 70 ~~g~~e~L~~L~~~G~-~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~ 136 (187)
T 2wm8_A 70 YPEVPEVLKRLQSLGV-PGAAASRTSEIEGANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIP 136 (187)
T ss_dssp CTTHHHHHHHHHHHTC-CEEEEECCSCHHHHHHHHHHTTCTTTEEEEEESSSCHHHHHHHHHHHHCCC
T ss_pred chhHHHHHHHHHHCCc-eEEEEeCCCChHHHHHHHHHcCcHhhcceeEEEeCchHHHHHHHHHHcCCC
Confidence 4677788888888899 888888877 68888899999874335542 3 233 2345667764
No 319
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=52.11 E-value=3 Score=19.18 Aligned_cols=11 Identities=27% Similarity=0.694 Sum_probs=8.8
Q ss_pred CCCCCCcCCHhH
Q 038822 47 FTPTCSLKHVPG 58 (162)
Q Consensus 47 ~cp~C~~~~~~~ 58 (162)
-||+|..- +|.
T Consensus 8 qcpvcqq~-mpa 18 (29)
T 3vhs_A 8 QCPVCQQM-MPA 18 (29)
T ss_dssp ECTTTCCE-EEG
T ss_pred eChHHHHh-CcH
Confidence 49999985 775
No 320
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=51.41 E-value=18 Score=22.00 Aligned_cols=35 Identities=14% Similarity=0.057 Sum_probs=26.1
Q ss_pred CCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHH
Q 038822 22 DQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFI 60 (162)
Q Consensus 22 ~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~ 60 (162)
.+|+.+.|-++ .+..+.|.+- |. |..|... .-.+.
T Consensus 25 ~dGGdvelv~v-~~g~V~V~L~-Ga-C~gCpss-~~TLk 59 (88)
T 1xhj_A 25 RDGGDCTLVDV-EDGIVKLQLH-GA-CGTCPSS-TITLK 59 (88)
T ss_dssp HHSCEEEEEEC-CSSEEEEEEE-SS-CCSSCHH-HHHHH
T ss_pred hcCCeEEEEEE-ECCEEEEEEe-ec-CCCCcch-HHHHH
Confidence 47888999997 6765555555 65 9999996 67776
No 321
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=51.01 E-value=17 Score=29.03 Aligned_cols=34 Identities=24% Similarity=0.255 Sum_probs=25.5
Q ss_pred CCCCCCCCCeeeeeeecCCCceeEehhhhc-CCCeEEEEE
Q 038822 4 IAVGDPLPDGTLVYFDEQDQLQQVSVHSLA-AGKKVILFG 42 (162)
Q Consensus 4 l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~-~gk~vvl~f 42 (162)
+.+|..+|++.+. ..+| ..++.+++ .+++++|.|
T Consensus 395 ~~~G~r~p~~~l~----~~~~-~~~l~d~~~~~~~~ll~~ 429 (499)
T 2qa2_A 395 PLLGMRMPHQELV----RAHG-KTSTTELLHPARGVLLDI 429 (499)
T ss_dssp TTTTSBCCCCEEE----CSSS-EEETTGGGTTCSEEEEEC
T ss_pred CCCCCCCCCCeee----cCCC-ceeHHHHhcCCeEEEEEe
Confidence 4579999999997 4444 67888877 457777766
No 322
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=46.86 E-value=17 Score=29.04 Aligned_cols=34 Identities=21% Similarity=0.207 Sum_probs=25.3
Q ss_pred CCCCCCCCCeeeeeeecCCCceeEehhhhc-CCCeEEEEE
Q 038822 4 IAVGDPLPDGTLVYFDEQDQLQQVSVHSLA-AGKKVILFG 42 (162)
Q Consensus 4 l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~-~gk~vvl~f 42 (162)
+.+|..+|++.+. ..+| ..++.+++ .+++++|.|
T Consensus 394 ~~~G~r~p~~~l~----~~~~-~~~l~d~~~~~~~~ll~~ 428 (500)
T 2qa1_A 394 PLLGKRMPALELT----TATR-ETSSTELLHTARGVLLDL 428 (500)
T ss_dssp TTTTSBCCCCEEE----CSSC-EEEHHHHTTTCCEEEEET
T ss_pred CcCCCCCCCCeee----cCCC-cEeHHHHhCCCeEEEEEe
Confidence 4679999999997 4444 67888887 456777765
No 323
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=46.05 E-value=11 Score=26.11 Aligned_cols=19 Identities=5% Similarity=-0.071 Sum_probs=10.9
Q ss_pred CccceeEEEEEcCCeEEEEEee
Q 038822 124 GTQSRRFALLVDDLKVKAANVE 145 (162)
Q Consensus 124 ~~~~~~~~~ii~~g~i~~~~~~ 145 (162)
|+| +++|..+|+.+....+
T Consensus 176 g~P---t~~i~~~G~~~~~~~G 194 (216)
T 2in3_A 176 GFP---ALVVESGTDRYLITTG 194 (216)
T ss_dssp SSS---EEEEEETTEEEEEESS
T ss_pred ccc---eEEEEECCEEEEeccC
Confidence 555 3555558886544444
No 324
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=45.73 E-value=64 Score=21.47 Aligned_cols=44 Identities=16% Similarity=0.124 Sum_probs=33.6
Q ss_pred HhHHHHhHHHHHhCCCCeEEEEEcCCH---HHHHHHHHhCCCCCceEE
Q 038822 56 VPGFIEKADELQSKGVDEILCISVNDP---FVMKAWAKTFPKNKSVKF 100 (162)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~v~~is~d~~---~~~~~~~~~~~~~~~~~~ 100 (162)
.+...++.++++++|+ .+..+|..+. +.....++..++..-|..
T Consensus 36 ~~g~~~~L~~L~~~g~-~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~ 82 (189)
T 3ib6_A 36 RKNAKETLEKVKQLGF-KQAILSNTATSDTEVIKRVLTNFGIIDYFDF 82 (189)
T ss_dssp CTTHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHHTTCGGGEEE
T ss_pred CcCHHHHHHHHHHCCC-EEEEEECCCccchHHHHHHHHhcCchhheEE
Confidence 5778888899998999 8888886554 788889999987433443
No 325
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=45.04 E-value=59 Score=22.09 Aligned_cols=38 Identities=13% Similarity=0.155 Sum_probs=32.0
Q ss_pred HhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCC
Q 038822 56 VPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPK 94 (162)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~ 94 (162)
.|...++.+.++++|+ .+..+|.......+.+++.+++
T Consensus 94 ~~g~~~~l~~l~~~g~-~~~ivS~~~~~~~~~~~~~~g~ 131 (232)
T 3fvv_A 94 TVQAVDVVRGHLAAGD-LCALVTATNSFVTAPIARAFGV 131 (232)
T ss_dssp CHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHcCC
Confidence 5677788888888898 8888888888888889999887
No 326
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=44.34 E-value=7.1 Score=27.41 Aligned_cols=46 Identities=15% Similarity=-0.053 Sum_probs=26.3
Q ss_pred EehhhhcCCCeEEEEEeeCCCCCCCCcCCHhHHHHhHH-HHH-hCCCCeEEE
Q 038822 27 VSVHSLAAGKKVILFGVPGDFTPTCSLKHVPGFIEKAD-ELQ-SKGVDEILC 76 (162)
Q Consensus 27 ~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~-~~~-~~~~~~v~~ 76 (162)
..+.+- .++.+|+.|+ ..-||.|.+- .+.+....+ ++- ...+ .++.
T Consensus 8 ~~~G~~-~a~vtivef~-D~~Cp~C~~~-~~~~~~~l~~~~i~~g~v-~~v~ 55 (205)
T 3gmf_A 8 HLLGNP-AAKLRLVEFV-SYTCPHCSHF-EIESEGQLKIGMVQPGKG-AIEV 55 (205)
T ss_dssp EEESCT-TCSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTTTTTSE-EEEE
T ss_pred ceecCC-CCCeEEEEEE-CCCCHHHHHH-HHHHHHHHHHHhccCCeE-EEEE
Confidence 344442 4454455554 7779999996 677665554 553 2334 5543
No 327
>1o22_A Orphan protein TM0875; structural genomics, joint center for struct genomics, JCSG, protein structure initiative, PSI, unknown; 2.00A {Thermotoga maritima} SCOP: d.238.1.1
Probab=43.11 E-value=9.7 Score=24.85 Aligned_cols=30 Identities=7% Similarity=0.214 Sum_probs=22.3
Q ss_pred CCCCCCCCCCeeeeeeecCCCceeEehhhh
Q 038822 3 PIAVGDPLPDGTLVYFDEQDQLQQVSVHSL 32 (162)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~~~g~~~~l~~~ 32 (162)
.|+-|.++|.|.++++....+.....|.++
T Consensus 65 vle~~e~ipsf~~kal~p~~~a~~lplg~w 94 (170)
T 1o22_A 65 VLEEGEEVPSFAIKALTPKENAVDLPLGDW 94 (170)
T ss_dssp EECTTCCCCSEEEEEECCCSCCTTCCSSSC
T ss_pred eecccccchHHHHHhcCCccccccCCcchh
Confidence 467899999999998765555556666665
No 328
>2z1d_A Hydrogenase expression/formation protein HYPD; [NIFE] hydrogenase maturation, [4Fe-4S] cluster, thiol redox binding protein; HET: CSW; 2.07A {Thermococcus kodakarensis}
Probab=43.06 E-value=67 Score=24.90 Aligned_cols=27 Identities=19% Similarity=0.220 Sum_probs=21.1
Q ss_pred EEEeeCCCCCCCCcCCHhHHHHhHHHHH
Q 038822 40 LFGVPGDFTPTCSLKHVPGFIEKADELQ 67 (162)
Q Consensus 40 l~f~~~~~cp~C~~~~~~~l~~~~~~~~ 67 (162)
|.+..|..||+|..- ...+++..+--.
T Consensus 58 ieli~GPGCPVCVtp-~~~ID~ai~LA~ 84 (372)
T 2z1d_A 58 VKVVSGPGCPVCITP-VEDIVAMQLIMR 84 (372)
T ss_dssp EEEEECCCCTTTTSC-HHHHHHHHHHHH
T ss_pred cEEecCCCCccEECc-HHHHHHHHHHHh
Confidence 566778889999996 888887666544
No 329
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=41.46 E-value=39 Score=22.26 Aligned_cols=45 Identities=16% Similarity=0.130 Sum_probs=33.5
Q ss_pred HhHHHHhHHHHHhCCCCeEEEEEcCC---HHHHHHHHHhCCCCCceEEEEc
Q 038822 56 VPGFIEKADELQSKGVDEILCISVND---PFVMKAWAKTFPKNKSVKFLAD 103 (162)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~v~~is~d~---~~~~~~~~~~~~~~~~~~~l~D 103 (162)
.+...+...+++++|. .|+..+.-+ ......|++++++ +++++..
T Consensus 26 ~~~~~~al~~l~~~G~-~iii~TgR~~~~~~~~~~~l~~~gi--~~~~I~~ 73 (142)
T 2obb_A 26 IPFAVETLKLLQQEKH-RLILWSVREGELLDEAIEWCRARGL--EFYAANK 73 (142)
T ss_dssp CTTHHHHHHHHHHTTC-EEEECCSCCHHHHHHHHHHHHTTTC--CCSEESS
T ss_pred CHHHHHHHHHHHHCCC-EEEEEeCCCcccHHHHHHHHHHcCC--CeEEEEc
Confidence 4566677778888898 777666544 5677889999998 7777765
No 330
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=41.44 E-value=64 Score=21.13 Aligned_cols=39 Identities=18% Similarity=0.122 Sum_probs=31.8
Q ss_pred HhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCC
Q 038822 56 VPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKN 95 (162)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 95 (162)
.+...++.+.+++.|+ .+..+|..+.+..+..++..++.
T Consensus 91 ~~~~~~~l~~l~~~g~-~~~i~s~~~~~~~~~~l~~~~l~ 129 (214)
T 3e58_A 91 FPDVLKVLNEVKSQGL-EIGLASSSVKADIFRALEENRLQ 129 (214)
T ss_dssp CTTHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHTTCG
T ss_pred CchHHHHHHHHHHCCC-CEEEEeCCcHHHHHHHHHHcCcH
Confidence 3556677788888898 89999988888889999998863
No 331
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=39.90 E-value=63 Score=21.41 Aligned_cols=43 Identities=19% Similarity=0.189 Sum_probs=33.1
Q ss_pred HhHHHHhHHHHHhCCCCeEEEEEcC---------------CHHHHHHHHHhCCCCCceEEE
Q 038822 56 VPGFIEKADELQSKGVDEILCISVN---------------DPFVMKAWAKTFPKNKSVKFL 101 (162)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~v~~is~d---------------~~~~~~~~~~~~~~~~~~~~l 101 (162)
.|...++.++++++|+ .+..+|.. ........++..++ .|..+
T Consensus 44 ~pg~~e~L~~L~~~G~-~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl--~fd~v 101 (176)
T 2fpr_A 44 EPGVIPQLLKLQKAGY-KLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGV--QFDEV 101 (176)
T ss_dssp CTTHHHHHHHHHHTTE-EEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTC--CEEEE
T ss_pred CccHHHHHHHHHHCCC-EEEEEECCccccccccchHhhhhhHHHHHHHHHHcCC--CeeEE
Confidence 5778888888988898 88888876 35667788899988 56543
No 332
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=39.65 E-value=43 Score=22.72 Aligned_cols=38 Identities=24% Similarity=0.293 Sum_probs=31.9
Q ss_pred HhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCC
Q 038822 56 VPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPK 94 (162)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~ 94 (162)
.|...++.+.++++|+ .+..+|..+....+..++.+++
T Consensus 88 ~~g~~~~l~~L~~~g~-~~~i~T~~~~~~~~~~l~~~gl 125 (225)
T 1nnl_A 88 TPGIRELVSRLQERNV-QVFLISGGFRSIVEHVASKLNI 125 (225)
T ss_dssp CTTHHHHHHHHHHTTC-EEEEEEEEEHHHHHHHHHHTTC
T ss_pred CccHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHHHcCC
Confidence 4667788888888899 8888888888888889999987
No 333
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=39.65 E-value=8.1 Score=27.55 Aligned_cols=41 Identities=7% Similarity=-0.053 Sum_probs=24.8
Q ss_pred CCCeEEEEEeeCCCCCCCCcCCHhHH-HHhHHHHHh-CCCCeEEEE
Q 038822 34 AGKKVILFGVPGDFTPTCSLKHVPGF-IEKADELQS-KGVDEILCI 77 (162)
Q Consensus 34 ~gk~vvl~f~~~~~cp~C~~~~~~~l-~~~~~~~~~-~~~~~v~~i 77 (162)
.++..|+.|+ ...||.|..- -+.+ .++.+++-+ ..+ .++-.
T Consensus 38 ~A~vtIvef~-Dy~CP~C~~~-~~~~~~~l~~~~~~~g~V-~~v~~ 80 (226)
T 3f4s_A 38 KAPILMIEYA-SLTCYHCSLF-HRNVFPKIKEKYIDTGKM-LYIFR 80 (226)
T ss_dssp TCSEEEEEEE-CTTCHHHHHH-HHHTHHHHHHHHTTTTSE-EEEEE
T ss_pred CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHHcccCCeE-EEEEE
Confidence 3454555555 6779999995 5654 567667743 335 55443
No 334
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=38.81 E-value=76 Score=20.31 Aligned_cols=35 Identities=20% Similarity=0.052 Sum_probs=26.2
Q ss_pred HHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCC
Q 038822 59 FIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPK 94 (162)
Q Consensus 59 l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~ 94 (162)
..+..+++++.|+ .+..+|..+....+.++++.++
T Consensus 41 ~~~~l~~l~~~g~-~~~i~T~~~~~~~~~~l~~~gl 75 (162)
T 2p9j_A 41 DGIGIKLLQKMGI-TLAVISGRDSAPLITRLKELGV 75 (162)
T ss_dssp HHHHHHHHHTTTC-EEEEEESCCCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCCC-EEEEEeCCCcHHHHHHHHHcCC
Confidence 3466667777788 7888887777777888888876
No 335
>3ir9_A Peptide chain release factor subunit 1; structural genomics, APC36528.1, C-terminal domain, PSI-2, protein structure initiative; 2.21A {Methanosarcina mazei}
Probab=38.64 E-value=48 Score=22.45 Aligned_cols=44 Identities=11% Similarity=0.111 Sum_probs=30.4
Q ss_pred CCCCCCcCCH------hHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCC
Q 038822 47 FTPTCSLKHV------PGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFP 93 (162)
Q Consensus 47 ~cp~C~~~~~------~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~ 93 (162)
.||.|-.+ + +.+..+.+..++.|. .|..||.++.+. .++.+.+|
T Consensus 105 ~c~~~g~~-~~~~e~~~~ve~L~e~~~~~G~-~v~ivs~~~eeG-~ql~~~fG 154 (166)
T 3ir9_A 105 NCPKCGSS-LEVTDVTDIVDEFSELADKSNA-KVVFVSTDFDEG-SQLMNAFG 154 (166)
T ss_dssp BCTTTCCB-EEEEEEEEHHHHHHHHHHHTTC-EEEEECSCSHHH-HHHHHTST
T ss_pred cccccCcc-chhhhHHHHHHHHHHHHHhcCC-EEEEECCCChhH-HHHHHcCC
Confidence 48888763 3 335678888888898 888888776543 45656554
No 336
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=37.77 E-value=67 Score=19.43 Aligned_cols=54 Identities=20% Similarity=0.197 Sum_probs=36.3
Q ss_pred HHHhHHHHHhCCCCeEEEEEcCCHHHHHH----HHHhCCCCCceEEEEcCCchHHHHcCCc
Q 038822 59 FIEKADELQSKGVDEILCISVNDPFVMKA----WAKTFPKNKSVKFLADGSAKYTHALGLE 115 (162)
Q Consensus 59 l~~~~~~~~~~~~~~v~~is~d~~~~~~~----~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 115 (162)
+.+..+.++...+ .++.++.|.++.... +.+.++. ++-.+.....++++..|..
T Consensus 20 ~~~v~kai~~gka-~lViiA~D~~~~~~~~i~~~c~~~~i--p~~~~~~s~~eLG~a~Gk~ 77 (99)
T 3j21_Z 20 SNETIRLAKTGGA-KLIIVAKNAPKEIKDDIYYYAKLSDI--PVYEFEGTSVELGTLLGKP 77 (99)
T ss_dssp HHHHHHHHHHTCC-SEEEEECCCCHHHHHHHHHHHHHTTC--CEEEECCCSCGGGGTTCST
T ss_pred HHHHHHHHHcCCc-cEEEEeCCCCHHHHHHHHHHHHHcCC--CEEEeCCCHHHHHHHHCCC
Confidence 3455556666667 788888886655443 4566665 6555556778899998875
No 337
>3brc_A Conserved protein of unknown function; methanobacterium thermoautotrophicum, STR genomics, MCSG, PSI-2; 1.60A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=37.53 E-value=58 Score=21.73 Aligned_cols=30 Identities=7% Similarity=0.123 Sum_probs=22.6
Q ss_pred EEEEEc-CCeEEEEEeecCCcceeCCHHHHH
Q 038822 130 FALLVD-DLKVKAANVESGGDFTVSSADDIL 159 (162)
Q Consensus 130 ~~~ii~-~g~i~~~~~~~~~~~~~~~~~~il 159 (162)
..+|+| .|+|...-..++..+....+++-+
T Consensus 111 mLvimD~kGRiLtas~SPs~~iHk~~ie~~v 141 (156)
T 3brc_A 111 LLVIMDSRGRLLSAAMSPPHVIHSMEVREAV 141 (156)
T ss_dssp EEEEEETTSCEEEEEEECCTTTSCCCHHHHH
T ss_pred EEEEEcCCCcEEeeccCchhhhhcccHHHHH
Confidence 467778 999999999887666666666544
No 338
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=37.11 E-value=45 Score=25.78 Aligned_cols=38 Identities=13% Similarity=0.252 Sum_probs=34.5
Q ss_pred HhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCC
Q 038822 56 VPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPK 94 (162)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~ 94 (162)
.|.+.++.+.+++.|+ .++.||....+-.+.+.++.|+
T Consensus 223 ~p~~~eLi~~L~~~G~-~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 223 LDEMVDLYRSLEENGI-DCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp CHHHHHHHHHHHHTTC-EEEEEEEEEHHHHHHHHHCTTS
T ss_pred CHHHHHHHHHHHHCCC-eEEEEcCCcHHHHHHHHHHhCc
Confidence 6889999999999999 9999999999999999998764
No 339
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=36.85 E-value=65 Score=22.40 Aligned_cols=37 Identities=22% Similarity=0.088 Sum_probs=29.9
Q ss_pred hHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCC
Q 038822 57 PGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPK 94 (162)
Q Consensus 57 ~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~ 94 (162)
+...+..++++++|+ .++.+|..+.....++.++.++
T Consensus 25 ~~~~~~l~~l~~~g~-~~~i~TGr~~~~~~~~~~~l~~ 61 (227)
T 1l6r_A 25 TKAIESIRSAEKKGL-TVSLLSGNVIPVVYALKIFLGI 61 (227)
T ss_dssp HHHHHHHHHHHHTTC-EEEEECSSCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHCCC-EEEEECCCCcHHHHHHHHHhCC
Confidence 455667777888898 8888888888888888888876
No 340
>4e6z_A Apicoplast TIC22, putative; TIC complex, import protein, transport protein; 2.15A {Plasmodium falciparum 3D7}
Probab=36.53 E-value=42 Score=24.95 Aligned_cols=63 Identities=8% Similarity=0.076 Sum_probs=37.0
Q ss_pred CCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEEeeCCCCCCCCcCCHhH-HHHhHHHH---HhCCCCeEEEEEcCCHH
Q 038822 8 DPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFGVPGDFTPTCSLKHVPG-FIEKADEL---QSKGVDEILCISVNDPF 83 (162)
Q Consensus 8 ~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f~~~~~cp~C~~~~~~~-l~~~~~~~---~~~~~~~v~~is~d~~~ 83 (162)
+.+|=|.+. |.+|.++-.+. .++-+.++|+. ..+ ..+ ++++.+.- ...++ +|..++-+...
T Consensus 75 ~~VPVF~It----n~~G~Pll~~~--~~~~V~~fF~s-------~~D-A~a~L~el~k~~~~~~~~~~-kV~pvsL~kvy 139 (279)
T 4e6z_A 75 EVIPVFLIT----NYNSSPYIFQE--NEKQVCYMFLC-------PYD-AENMLNDMIKYNGMKYNGNI-KIHNITMKKAY 139 (279)
T ss_dssp TTSEEEEEE----CTTCCBCCEEE--TTEEEEEEESS-------HHH-HHHHHHHHHHHCHHHHTTSC-EEEEEEHHHHH
T ss_pred cCCCEEEEE----cCCCCEEEecC--CCCeEEEEECC-------HHH-HHHHHHHHHhccCcccccCc-eEEEecHHHHH
Confidence 358889999 99999887765 45555555541 222 222 22322211 13467 89999987654
Q ss_pred HH
Q 038822 84 VM 85 (162)
Q Consensus 84 ~~ 85 (162)
.+
T Consensus 140 ~l 141 (279)
T 4e6z_A 140 EL 141 (279)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 341
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=36.02 E-value=72 Score=20.89 Aligned_cols=39 Identities=13% Similarity=0.120 Sum_probs=31.4
Q ss_pred HhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCC
Q 038822 56 VPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKN 95 (162)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 95 (162)
.+...++.+.+++.|+ .+..+|..+.+.....++.+++.
T Consensus 86 ~~~~~~~l~~l~~~g~-~~~i~s~~~~~~~~~~l~~~~~~ 124 (216)
T 2pib_A 86 NPGVREALEFVKSKRI-KLALATSTPQREALERLRRLDLE 124 (216)
T ss_dssp CTTHHHHHHHHHHTTC-EEEEECSSCHHHHHHHHHHTTCG
T ss_pred CcCHHHHHHHHHHCCC-CEEEEeCCcHHhHHHHHHhcChH
Confidence 4566677788888888 88888888888888899988873
No 342
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=35.08 E-value=47 Score=21.03 Aligned_cols=39 Identities=18% Similarity=0.291 Sum_probs=21.3
Q ss_pred EEEEeeCCCCC--CCC----cCCHhHHHHhHHHHHhCCCCeEEEEEc
Q 038822 39 ILFGVPGDFTP--TCS----LKHVPGFIEKADELQSKGVDEILCISV 79 (162)
Q Consensus 39 vl~f~~~~~cp--~C~----~~~~~~l~~~~~~~~~~~~~~v~~is~ 79 (162)
+-.|=|+-||+ +|- .+ +-++....+.++++|+ .|--.+.
T Consensus 4 i~ifepamCCstGvCG~~vd~~-L~~~~~~~~~lk~~Gi-~V~RyNL 48 (110)
T 3kgk_A 4 LMVFDPAMAASTGVCGTDVDQA-LVDFSTDVQWLKQSGV-QIERFNL 48 (110)
T ss_dssp EEEEECC-------------CH-HHHHHHHHHHHHHHTC-CEEEEET
T ss_pred eEEecchhccccCCcCCCCCHH-HHHHHHHHHHHHHCCC-eEEEEcc
Confidence 34455677765 343 34 6677788888888888 6655544
No 343
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=35.03 E-value=1.3e+02 Score=21.92 Aligned_cols=83 Identities=12% Similarity=0.087 Sum_probs=46.1
Q ss_pred CCCCCeeeeeeecCCCceeEehhhhcC-------CCeEEEEEeeCCCCCCCCcCCHhH-HHHhHH---------HHHhCC
Q 038822 8 DPLPDGTLVYFDEQDQLQQVSVHSLAA-------GKKVILFGVPGDFTPTCSLKHVPG-FIEKAD---------ELQSKG 70 (162)
Q Consensus 8 ~~~P~f~l~~~~~~~~g~~~~l~~~~~-------gk~vvl~f~~~~~cp~C~~~~~~~-l~~~~~---------~~~~~~ 70 (162)
+.+|-|.+. |..|.++-.+.- . ++.+.++|+ +..+ ... +.++.. ++ ..+
T Consensus 12 ~~VPVF~It----n~~G~Pll~~~~-~~~~~~~~~~~V~~~F~-------s~~d-A~~~L~~lk~~~~~np~~~~~-~~~ 77 (252)
T 4ev1_A 12 DSVPIYLVT----NEKGLPLSRPLP-NAPNGQKAGGSITGAYM-------SRQE-AQAFINELRNAKNKDPKMQEI-VKS 77 (252)
T ss_dssp TTSEEEEEE----CTTCCBCEEECC-CCTTSCCSCSEEEEEES-------CHHH-HHHHHHHHHHCSSCCHHHHHH-HTT
T ss_pred cCCcEEEEE----CCCCCeEEEecC-CccccccCCCeEEEEEe-------cHHH-HHHHHHHHHhccccCchhhhh-ccC
Confidence 357889999 999998876642 2 344555554 2222 222 223333 22 246
Q ss_pred CCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCC
Q 038822 71 VDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGS 105 (162)
Q Consensus 71 ~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~ 105 (162)
+ +|..|+.+....+.+--+...-...|.++.|+.
T Consensus 78 ~-kV~~vsL~~vyql~~~~~~k~~~l~F~fvP~~~ 111 (252)
T 4ev1_A 78 L-QVTAVPLGVIYQQLQQTKKDPNRLLFAFKPVDQ 111 (252)
T ss_dssp C-EEEEEEHHHHHHHHHHTTTCTTCEEEEEECCHH
T ss_pred c-eEEEeeHHHHHHHHHhhccCCcCceEEEcCCHH
Confidence 7 899999876554432221111112788888865
No 344
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=34.61 E-value=78 Score=20.95 Aligned_cols=38 Identities=18% Similarity=0.238 Sum_probs=29.7
Q ss_pred hHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCC
Q 038822 57 PGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKN 95 (162)
Q Consensus 57 ~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 95 (162)
+...++.+.+++.|+ .+..+|..+.......++..++.
T Consensus 73 ~~~~~~l~~l~~~g~-~~~i~s~~~~~~~~~~l~~~~l~ 110 (205)
T 3m9l_A 73 PGAVELVRELAGRGY-RLGILTRNARELAHVTLEAIGLA 110 (205)
T ss_dssp TTHHHHHHHHHHTTC-EEEEECSSCHHHHHHHHHHTTCG
T ss_pred ccHHHHHHHHHhcCC-eEEEEeCCchHHHHHHHHHcCch
Confidence 445667777888888 88888888888888888888863
No 345
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=34.57 E-value=51 Score=24.89 Aligned_cols=38 Identities=21% Similarity=0.215 Sum_probs=33.1
Q ss_pred cCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhC
Q 038822 53 LKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTF 92 (162)
Q Consensus 53 ~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~ 92 (162)
+- .+.+.++.+.+++.|+ .++.||....+-.+.|.+..
T Consensus 143 ~~-~~~~~~l~~~l~~~G~-~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 143 RV-FSGQRELYNKLMENGI-EVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp EE-CHHHHHHHHHHHHTTC-EEEEEEEEEHHHHHHHHTCG
T ss_pred cc-CHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhhc
Confidence 44 6788999999999999 99999999888888898873
No 346
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=34.14 E-value=25 Score=26.41 Aligned_cols=23 Identities=9% Similarity=-0.103 Sum_probs=15.8
Q ss_pred CCCCCCCCcCCHhHHHHhHHHHHh
Q 038822 45 GDFTPTCSLKHVPGFIEKADELQS 68 (162)
Q Consensus 45 ~~~cp~C~~~~~~~l~~~~~~~~~ 68 (162)
..+|+.|... +..+.+++++++.
T Consensus 254 ~~~~~~~~~~-~~~~~~vA~~~~~ 276 (350)
T 1sji_A 254 ERSDPDGYEF-LEILKQVARDNTD 276 (350)
T ss_dssp CTTSHHHHHH-HHHHHHHHHHGGG
T ss_pred cCCCccHHHH-HHHHHHHHHHhCC
Confidence 5567667764 7777777777763
No 347
>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}
Probab=33.90 E-value=6.3 Score=27.15 Aligned_cols=56 Identities=16% Similarity=0.025 Sum_probs=29.9
Q ss_pred EEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceEEEEcCC
Q 038822 40 LFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVKFLADGS 105 (162)
Q Consensus 40 l~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~ 105 (162)
+..|....||.|++- .+.=+..+-.. +++-|.... ....|.+.+.. ...|+|.|.+
T Consensus 4 m~LY~~~~sP~~~rv------r~~L~e~gi~~-e~~~v~~~~--~~~~~~~~nP~-g~vPvL~~~~ 59 (210)
T 4hoj_A 4 MTLYSGITCPFSHRC------RFVLYEKGMDF-EIKDIDIYN--KPEDLAVMNPY-NQVPVLVERD 59 (210)
T ss_dssp CEEEECTTCHHHHHH------HHHHHHHTCCC-EEEECCTTS--CCHHHHHHCTT-CCSCEEEETT
T ss_pred EEEecCCCChHHHHH------HHHHHHcCCCC-EEEEeCCCC--CCHHHHHHCCC-CCCcEEEECC
Confidence 344556679998874 22222222334 555444322 22346665553 4688888766
No 348
>2ftc_P Mitochondrial ribosomal protein L33 isoform A, mitochondrial 39S ribosomal protein L27; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus} PDB: 3iy9_P
Probab=33.46 E-value=12 Score=20.28 Aligned_cols=8 Identities=13% Similarity=0.493 Sum_probs=6.7
Q ss_pred CCCCCCcCC
Q 038822 47 FTPTCSLKH 55 (162)
Q Consensus 47 ~cp~C~~~~ 55 (162)
+||.|++ |
T Consensus 38 ycp~~~k-h 45 (52)
T 2ftc_P 38 YDPVVKQ-R 45 (52)
T ss_pred cCCCCCc-e
Confidence 3999998 5
No 349
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=32.69 E-value=84 Score=19.02 Aligned_cols=53 Identities=15% Similarity=0.124 Sum_probs=35.3
Q ss_pred HHhHHHHHhCCCCeEEEEEcCCHHHHHH----HHHhCCCCCceEEEEcCCchHHHHcCCc
Q 038822 60 IEKADELQSKGVDEILCISVNDPFVMKA----WAKTFPKNKSVKFLADGSAKYTHALGLE 115 (162)
Q Consensus 60 ~~~~~~~~~~~~~~v~~is~d~~~~~~~----~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 115 (162)
++..+.++...+ .++.++.|.++.... +.+.++. |+-.+.+...++++..|..
T Consensus 22 ~~v~kai~~gka-~lViiA~D~~~~~~~~l~~~c~~~~v--p~~~~~~s~~eLG~a~G~~ 78 (101)
T 1w41_A 22 RKSIQYAKMGGA-KLIIVARNARPDIKEDIEYYARLSGI--PVYEFEGTSVELGTLLGRP 78 (101)
T ss_dssp HHHHHHHHHTCC-SEEEEETTSCHHHHHHHHHHHHHHTC--CEEEESSCHHHHHHHTTCS
T ss_pred HHHHHHHHcCCC-cEEEEeCCCCHHHHHHHHHHHHhcCC--CEEEecCCHHHHHHHhCCC
Confidence 445555666667 788899887655544 4455555 5544446778999999975
No 350
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=32.51 E-value=1e+02 Score=20.93 Aligned_cols=37 Identities=22% Similarity=0.222 Sum_probs=30.2
Q ss_pred hHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCC
Q 038822 57 PGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPK 94 (162)
Q Consensus 57 ~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~ 94 (162)
+...++.+.+++.|+ .+..+|..+.......++.+++
T Consensus 108 ~~~~~~l~~l~~~g~-~~~i~s~~~~~~~~~~l~~~~l 144 (240)
T 2no4_A 108 PDAAETLEKLKSAGY-IVAILSNGNDEMLQAALKASKL 144 (240)
T ss_dssp TTHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHhcCc
Confidence 566677788888898 8888888888888888888886
No 351
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=31.98 E-value=89 Score=21.14 Aligned_cols=38 Identities=18% Similarity=0.160 Sum_probs=30.7
Q ss_pred HhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCC
Q 038822 56 VPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPK 94 (162)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~ 94 (162)
.+...++.+.+++.|+ .+..+|..+.......++..++
T Consensus 85 ~~~~~~~l~~l~~~g~-~~~i~s~~~~~~~~~~l~~~gl 122 (222)
T 2nyv_A 85 YPEIPYTLEALKSKGF-KLAVVSNKLEELSKKILDILNL 122 (222)
T ss_dssp CTTHHHHHHHHHHTTC-EEEEECSSCHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHcCC
Confidence 4667777888888888 8888888887778888888886
No 352
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=31.11 E-value=1.1e+02 Score=20.48 Aligned_cols=37 Identities=16% Similarity=0.223 Sum_probs=29.7
Q ss_pred hHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCC
Q 038822 57 PGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPK 94 (162)
Q Consensus 57 ~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~ 94 (162)
+...++.+.+++.|+ .+..+|..+.......++..++
T Consensus 98 ~~~~~~l~~l~~~g~-~~~i~t~~~~~~~~~~l~~~~l 134 (232)
T 1zrn_A 98 SEVPDSLRELKRRGL-KLAILSNGSPQSIDAVVSHAGL 134 (232)
T ss_dssp TTHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHhcCh
Confidence 566677788888888 8888888887778888888876
No 353
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=30.80 E-value=81 Score=21.08 Aligned_cols=39 Identities=13% Similarity=0.148 Sum_probs=30.9
Q ss_pred HhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCC
Q 038822 56 VPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKN 95 (162)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 95 (162)
.+.+.++.+.+++.|+ .+..+|..+.+.....++..++.
T Consensus 93 ~~~~~~~l~~l~~~g~-~~~i~s~~~~~~~~~~l~~~~l~ 131 (233)
T 3s6j_A 93 LPGAVELLETLDKENL-KWCIATSGGIDTATINLKALKLD 131 (233)
T ss_dssp CTTHHHHHHHHHHTTC-CEEEECSSCHHHHHHHHHTTTCC
T ss_pred CCCHHHHHHHHHHCCC-eEEEEeCCchhhHHHHHHhcchh
Confidence 3556677788888888 88888888888888888888763
No 354
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=30.65 E-value=25 Score=22.45 Aligned_cols=25 Identities=16% Similarity=0.113 Sum_probs=13.8
Q ss_pred hhhhcCCCeEEEEEeeC---CCCCCCCc
Q 038822 29 VHSLAAGKKVILFGVPG---DFTPTCSL 53 (162)
Q Consensus 29 l~~~~~gk~vvl~f~~~---~~cp~C~~ 53 (162)
+.++.+..+|||+-=.. ..||+|.+
T Consensus 13 i~~~i~~~~VvvF~Kgt~~~P~C~fc~~ 40 (118)
T 2wul_A 13 LDALVKKDKVVVFLKGTPEQPQCGFSNA 40 (118)
T ss_dssp HHHHHHHSSEEEEESBCSSSBSSHHHHH
T ss_pred HHHHHhcCCEEEEEcCCCCCCCCHHHHH
Confidence 45554556676665422 24666666
No 355
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=30.00 E-value=1.1e+02 Score=20.84 Aligned_cols=38 Identities=16% Similarity=0.190 Sum_probs=31.2
Q ss_pred HhHHHHhHHHHHhCCCCeEEEEEcCC---------------HHHHHHHHHhCCC
Q 038822 56 VPGFIEKADELQSKGVDEILCISVND---------------PFVMKAWAKTFPK 94 (162)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~v~~is~d~---------------~~~~~~~~~~~~~ 94 (162)
.+...++.++++++|+ .+..+|..+ .....+.+++.++
T Consensus 52 ~pg~~e~L~~L~~~G~-~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl 104 (211)
T 2gmw_A 52 IDGVIDAMRELKKMGF-ALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDV 104 (211)
T ss_dssp CTTHHHHHHHHHHTTC-EEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTC
T ss_pred CcCHHHHHHHHHHCCC-eEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCC
Confidence 5778888899999999 888888877 3667788888887
No 356
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=29.95 E-value=77 Score=21.36 Aligned_cols=59 Identities=14% Similarity=0.098 Sum_probs=39.9
Q ss_pred HhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCC--ceEEEEcC------C----chHHHHcCCc
Q 038822 56 VPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNK--SVKFLADG------S----AKYTHALGLE 115 (162)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~--~~~~l~D~------~----~~~~~~~gv~ 115 (162)
.+...++.+.+++.|+ .+..+|..+.......++..++.. ...+.++. + ..+.+.+|+.
T Consensus 105 ~~~~~~~l~~l~~~g~-~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~ 175 (231)
T 3kzx_A 105 NDGAIELLDTLKENNI-TMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIE 175 (231)
T ss_dssp CTTHHHHHHHHHHTTC-EEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCC
T ss_pred CcCHHHHHHHHHHCCC-eEEEEECCCHHHHHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCCC
Confidence 4556677788888888 888888887888888888888632 23334432 1 2455777775
No 357
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=29.04 E-value=96 Score=20.69 Aligned_cols=38 Identities=8% Similarity=0.096 Sum_probs=31.0
Q ss_pred HhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCC
Q 038822 56 VPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPK 94 (162)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~ 94 (162)
.+...++.+.+++.|+ .+..+|..+.+.....++..++
T Consensus 98 ~~~~~~~l~~l~~~g~-~~~i~s~~~~~~~~~~l~~~~l 135 (230)
T 3um9_A 98 FADVPQALQQLRAAGL-KTAILSNGSRHSIRQVVGNSGL 135 (230)
T ss_dssp CTTHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHhCCC-eEEEEeCCCHHHHHHHHHHCCC
Confidence 4667778888888898 8888888888888888888776
No 358
>3bbo_3 Ribosomal protein L33; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=28.64 E-value=20 Score=20.57 Aligned_cols=8 Identities=50% Similarity=1.070 Sum_probs=6.7
Q ss_pred CCCCCCcCC
Q 038822 47 FTPTCSLKH 55 (162)
Q Consensus 47 ~cp~C~~~~ 55 (162)
+||.|++ |
T Consensus 51 ycp~c~k-H 58 (66)
T 3bbo_3 51 FCPYCYK-H 58 (66)
T ss_dssp CCCSSSS-C
T ss_pred cCCCCCC-e
Confidence 4999998 5
No 359
>3e20_C Eukaryotic peptide chain release factor subunit 1; SUP35, SUP45, translation termination, peptide release, GTP- nucleotide-binding; 3.50A {Schizosaccharomyces pombe}
Probab=28.61 E-value=47 Score=26.32 Aligned_cols=44 Identities=11% Similarity=0.074 Sum_probs=23.5
Q ss_pred CCCCCCcCCHh-----HHH-HhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCC
Q 038822 47 FTPTCSLKHVP-----GFI-EKADELQSKGVDEILCISVNDPFVMKAWAKTFP 93 (162)
Q Consensus 47 ~cp~C~~~~~~-----~l~-~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~ 93 (162)
-||.|-.+ +. .+. .+.+..++.|. .|..||.++.+. .++++.+|
T Consensus 365 ~c~~~g~~-~~~~e~~~~ve~l~e~a~~~G~-~v~~vs~~~~eG-~ql~~~fg 414 (441)
T 3e20_C 365 LDKDTGAE-MELVSSMLLSEWLAEHYKDYGA-NLEFVSDRSQEG-MQFVKGFG 414 (441)
T ss_dssp -------------CCEEHHHHHHHHGGGGSC-CEEEECTTSHHH-HHHHHTST
T ss_pred cCcccCcc-ceecchhhHHHHHHHHHHHcCC-EEEEECCCCHHH-HHHHHcCC
Confidence 48888875 53 333 47777788898 899898776544 55666654
No 360
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=28.38 E-value=1.1e+02 Score=21.08 Aligned_cols=37 Identities=14% Similarity=0.231 Sum_probs=29.2
Q ss_pred hHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCC
Q 038822 57 PGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPK 94 (162)
Q Consensus 57 ~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~ 94 (162)
+...++.+.+++.|+ .+..+|..+.......++.+++
T Consensus 117 ~~~~~~l~~l~~~g~-~~~i~t~~~~~~~~~~l~~~gl 153 (243)
T 2hsz_A 117 PNVKETLEALKAQGY-ILAVVTNKPTKHVQPILTAFGI 153 (243)
T ss_dssp TTHHHHHHHHHHTTC-EEEEECSSCHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHCCC-EEEEEECCcHHHHHHHHHHcCc
Confidence 556677777888888 8888888887778888888886
No 361
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=28.06 E-value=99 Score=18.40 Aligned_cols=28 Identities=21% Similarity=0.254 Sum_probs=14.4
Q ss_pred hHHHHhHHHHHhCCCCeEEEEEcCCHHHH
Q 038822 57 PGFIEKADELQSKGVDEILCISVNDPFVM 85 (162)
Q Consensus 57 ~~l~~~~~~~~~~~~~~v~~is~d~~~~~ 85 (162)
...+++..+-+..|+ .--.+-..+|+++
T Consensus 64 ndvnefqneakkegv-sydvlkstdpeel 91 (112)
T 2lnd_A 64 NDVNEFQNEAKKEGV-SYDVLKSTDPEEL 91 (112)
T ss_dssp HHHHHHHHHHHHHTC-EEEEEECCCHHHH
T ss_pred ccHHHHHHHHHhcCc-chhhhccCCHHHH
Confidence 445555555555565 4444444445443
No 362
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=27.77 E-value=1.1e+02 Score=20.46 Aligned_cols=39 Identities=15% Similarity=0.227 Sum_probs=30.7
Q ss_pred HhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCC
Q 038822 56 VPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKN 95 (162)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 95 (162)
.+...++.+.+++.|+ .+..+|..+.......++..++.
T Consensus 101 ~~~~~~~l~~l~~~g~-~~~i~t~~~~~~~~~~l~~~~l~ 139 (233)
T 3umb_A 101 FPENVPVLRQLREMGL-PLGILSNGNPQMLEIAVKSAGMS 139 (233)
T ss_dssp CTTHHHHHHHHHTTTC-CEEEEESSCHHHHHHHHHTTTCT
T ss_pred CCCHHHHHHHHHhCCC-cEEEEeCCCHHHHHHHHHHCCcH
Confidence 3556677788888888 88888888888888888888763
No 363
>2zjr_1 50S ribosomal protein L33; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: g.41.8.6 PDB: 1nwx_1* 1xbp_1* 2zjp_1* 2zjq_1 1nwy_1 3cf5_1* 3dll_1* 3pio_1* 3pip_1* 1pnu_1 1pny_1 1vor_3 1vou_3 1vow_3 1voy_3 1vp0_3
Probab=27.17 E-value=18 Score=19.87 Aligned_cols=8 Identities=25% Similarity=0.717 Sum_probs=6.7
Q ss_pred CCCCCCcCC
Q 038822 47 FTPTCSLKH 55 (162)
Q Consensus 47 ~cp~C~~~~ 55 (162)
+||.|++ |
T Consensus 40 ycp~~~k-H 47 (55)
T 2zjr_1 40 YDPVAKK-H 47 (55)
T ss_pred cCCCCCC-E
Confidence 3999998 5
No 364
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=27.11 E-value=40 Score=20.67 Aligned_cols=37 Identities=11% Similarity=0.018 Sum_probs=23.9
Q ss_pred HhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCC
Q 038822 56 VPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFP 93 (162)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~ 93 (162)
.|...++.+++++.|+ .+..+|..+.......++..+
T Consensus 20 ~~~~~~~l~~L~~~G~-~~~i~S~~~~~~~~~~l~~~~ 56 (137)
T 2pr7_A 20 QRRWRNLLAAAKKNGV-GTVILSNDPGGLGAAPIRELE 56 (137)
T ss_dssp HHHHHHHHHHHHHTTC-EEEEEECSCCGGGGHHHHHHH
T ss_pred CccHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHCC
Confidence 4556677777777788 777777765555455555543
No 365
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1
Probab=26.26 E-value=25 Score=21.59 Aligned_cols=19 Identities=11% Similarity=-0.120 Sum_probs=15.6
Q ss_pred EEEEEcCCeEEEEEeecCC
Q 038822 130 FALLVDDLKVKAANVESGG 148 (162)
Q Consensus 130 ~~~ii~~g~i~~~~~~~~~ 148 (162)
..||+|.|..+|+|.|...
T Consensus 30 d~FILd~g~~iyvW~G~~s 48 (104)
T 1kcq_A 30 DCFILDLGNNIHQWCGSNS 48 (104)
T ss_dssp SEEEEECSSEEEEEECTTC
T ss_pred CeEEEeCCCEEEEEeCCCC
Confidence 3899997788999998744
No 366
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=25.94 E-value=99 Score=20.97 Aligned_cols=58 Identities=9% Similarity=0.041 Sum_probs=39.0
Q ss_pred hHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCC--ceEEEEcCC----------chHHHHcCCc
Q 038822 57 PGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNK--SVKFLADGS----------AKYTHALGLE 115 (162)
Q Consensus 57 ~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~--~~~~l~D~~----------~~~~~~~gv~ 115 (162)
+...++.+.+++.|+ .+..+|..+.......++..++.. ...+.+|.. ..+.+.+|+.
T Consensus 113 ~~~~~~l~~l~~~g~-~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~ 182 (240)
T 3sd7_A 113 ENMKEILEMLYKNGK-ILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVK 182 (240)
T ss_dssp TTHHHHHHHHHHTTC-EEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCC
T ss_pred ccHHHHHHHHHHCCC-eEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCC
Confidence 445667777888888 888888877888888888888632 333444422 2466777765
No 367
>3vk8_A Probable formamidopyrimidine-DNA glycosylase; DNA glycosylase, hneil1 ortholog, DNA lesion, thymine glycol zincless finger; HET: DNA CTG; 2.00A {Acanthamoeba polyphaga mimivirus} PDB: 3vk7_A* 3a42_A 3a46_A* 3a45_A*
Probab=25.60 E-value=17 Score=27.18 Aligned_cols=10 Identities=10% Similarity=0.115 Sum_probs=7.8
Q ss_pred CCCCCCCCcC
Q 038822 45 GDFTPTCSLK 54 (162)
Q Consensus 45 ~~~cp~C~~~ 54 (162)
..|||.|++.
T Consensus 279 t~~CP~CQ~~ 288 (295)
T 3vk8_A 279 TYWAPAIQKL 288 (295)
T ss_dssp EEECTTTCBC
T ss_pred cEECCCCCCC
Confidence 3569999984
No 368
>1vjq_A Designed protein; structural genomics, engineered protein, PSI, protein struct initiative, structural genomics of pathogenic protozoa CONS SGPP; 2.10A {} SCOP: k.43.1.1
Probab=25.56 E-value=58 Score=18.60 Aligned_cols=28 Identities=7% Similarity=-0.088 Sum_probs=21.5
Q ss_pred EEEEcCCHHHHHHHHHhCCCCCceEEEEcC
Q 038822 75 LCISVNDPFVMKAWAKTFPKNKSVKFLADG 104 (162)
Q Consensus 75 ~~is~d~~~~~~~~~~~~~~~~~~~~l~D~ 104 (162)
+.|+++.....+++++.++. ++.++.+-
T Consensus 43 i~V~p~~~~~f~~~L~~~~i--~~~v~i~d 70 (79)
T 1vjq_A 43 ILIPSDMVEWFLEMLKAKGI--PFTVYVEE 70 (79)
T ss_dssp EEECGGGHHHHHHHHHHTTC--CEEEEEEE
T ss_pred EEECHHHHHHHHHHHHHCCC--cEEEEehh
Confidence 45777777888889998888 88877553
No 369
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=24.86 E-value=19 Score=27.48 Aligned_cols=30 Identities=10% Similarity=-0.074 Sum_probs=15.4
Q ss_pred EEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhC
Q 038822 38 VILFGVPGDFTPTCSLKHVPGFIEKADELQSK 69 (162)
Q Consensus 38 vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~ 69 (162)
.++.|+ ..+|+.|... +..+.+++++++++
T Consensus 250 ~~~~f~-~~~~~~~~~~-~~~l~~vA~~~~~~ 279 (367)
T 3us3_A 250 HIVAFA-EEADPDGYEF-LEILKSVAQDNTDN 279 (367)
T ss_dssp EEEEEC-CTTSHHHHHH-HHHHHHHHHHTTTC
T ss_pred EEEEEE-cCCChhHHHH-HHHHHHHHHHcCCC
Confidence 444444 3345545554 55566666666543
No 370
>3bby_A Uncharacterized GST-like protein YFCF; NP_416804.1, glutathione S-transferase, N-terminal domain, S genomics; 1.85A {Escherichia coli}
Probab=24.75 E-value=25 Score=23.96 Aligned_cols=60 Identities=15% Similarity=0.129 Sum_probs=24.0
Q ss_pred EEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHH-HHHHHHHhCCCCCceEEEEcCC
Q 038822 38 VILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPF-VMKAWAKTFPKNKSVKFLADGS 105 (162)
Q Consensus 38 vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~-~~~~~~~~~~~~~~~~~l~D~~ 105 (162)
+.|+.++..+||.|.+- .+.-+..+..+ ++.-|.....+ ....|.+.+.. ...|+|.|.+
T Consensus 7 ~~Ly~~~~~~s~~~~~v------~~~l~~~gi~~-e~~~v~~~~~~~~~~~~~~~nP~-g~vP~L~~~g 67 (215)
T 3bby_A 7 ITLWSDAHFFSPYVLSA------WVALQEKGLSF-HIKTIDLDSGEHLQPTWQGYGQT-RRVPLLQIDD 67 (215)
T ss_dssp EEEEEETTSCCHHHHHH------HHHHHHHTCCC-EEEEEC-------------------CCCEEEETT
T ss_pred EEEEecCCCCCcHHHHH------HHHHHHcCCCC-EEEEecCccccccCHHHHhhCCC-CCCCEEEeCC
Confidence 55666644468888774 22222223344 55555543222 22345554442 3678877754
No 371
>2gjf_A Designed protein; procarboxypeptidase, de novo protein; NMR {}
Probab=24.73 E-value=84 Score=17.85 Aligned_cols=27 Identities=7% Similarity=-0.081 Sum_probs=20.8
Q ss_pred EEEEcCCHHHHHHHHHhCCCCCceEEEEc
Q 038822 75 LCISVNDPFVMKAWAKTFPKNKSVKFLAD 103 (162)
Q Consensus 75 ~~is~d~~~~~~~~~~~~~~~~~~~~l~D 103 (162)
+.|+++.....+++++.+++ ++.++.+
T Consensus 51 I~V~p~~~~~f~~~L~~~~I--~y~Vlie 77 (78)
T 2gjf_A 51 ILIPSDMVEWFLEMLKAKGI--PFTVYVE 77 (78)
T ss_dssp EEECTTSHHHHHHHHHHHTC--CEEEEEE
T ss_pred EEECHHHHHHHHHHHHHCCC--cEEEEeC
Confidence 46777778888888888888 7777654
No 372
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=23.91 E-value=1.5e+02 Score=19.57 Aligned_cols=39 Identities=13% Similarity=0.120 Sum_probs=30.9
Q ss_pred HhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCC
Q 038822 56 VPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKN 95 (162)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~ 95 (162)
.|...++.+.+++.|+ .+..+|..+.......++..++.
T Consensus 86 ~pg~~~~l~~L~~~g~-~~~i~tn~~~~~~~~~l~~~~l~ 124 (216)
T 3kbb_A 86 NPGVREALEFVKSKRI-KLALATSTPQREALERLRRLDLE 124 (216)
T ss_dssp CTTHHHHHHHHHHTTC-EEEEECSSCHHHHHHHHHHTTCG
T ss_pred CccHHHHHHHHHHcCC-CcccccCCcHHHHHHHHHhcCCC
Confidence 4566777888888898 78878888888888888888873
No 373
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=23.90 E-value=61 Score=21.60 Aligned_cols=38 Identities=16% Similarity=0.288 Sum_probs=29.9
Q ss_pred HhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCC
Q 038822 56 VPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPK 94 (162)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~ 94 (162)
.+...++.+.+++.|+ .+..+|.........+++..++
T Consensus 77 ~~~~~~~l~~l~~~g~-~~~i~S~~~~~~~~~~l~~~gl 114 (217)
T 3m1y_A 77 FEGALELVSALKEKNY-KVVCFSGGFDLATNHYRDLLHL 114 (217)
T ss_dssp CBTHHHHHHHHHTTTE-EEEEEEEEEHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHHcCc
Confidence 4556777788888888 8888888777778888888876
No 374
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=23.58 E-value=59 Score=26.15 Aligned_cols=31 Identities=23% Similarity=0.092 Sum_probs=23.3
Q ss_pred CCCCCCCCCeeeeeeecCCCceeEehhhhcCCCeEEEEE
Q 038822 4 IAVGDPLPDGTLVYFDEQDQLQQVSVHSLAAGKKVILFG 42 (162)
Q Consensus 4 l~~G~~~P~f~l~~~~~~~~g~~~~l~~~~~gk~vvl~f 42 (162)
..+|..+|++.+. + | .++.|+++.++++|.|
T Consensus 450 ~~~G~r~p~~~l~----~--g--~~l~d~~~~~~~ll~~ 480 (549)
T 2r0c_A 450 ARPGARAPHAWLT----P--T--TSTLDLFGRGFVLLSF 480 (549)
T ss_dssp CCTTSBCCCCBSS----S--S--CBGGGGCSSSEEEEEE
T ss_pred CCCCCcCCCcEeC----C--C--cCHHHHcCCceEEEEc
Confidence 5689999998776 3 3 5788877777777765
No 375
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=23.10 E-value=12 Score=28.91 Aligned_cols=18 Identities=6% Similarity=0.237 Sum_probs=12.3
Q ss_pred CCeEEEEEeeCCCCCCCCcC
Q 038822 35 GKKVILFGVPGDFTPTCSLK 54 (162)
Q Consensus 35 gk~vvl~f~~~~~cp~C~~~ 54 (162)
..+++|+. .+|||.|.+-
T Consensus 260 ~~~VvVYs--k~~CPyC~~A 277 (362)
T 2jad_A 260 ENEIFVAS--KTYCPYSHAA 277 (362)
T ss_dssp TCSEEEEE--CTTCHHHHHH
T ss_pred cCCEEEEE--cCCCcchHHH
Confidence 44555544 5789999984
No 376
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=23.02 E-value=96 Score=21.08 Aligned_cols=38 Identities=5% Similarity=0.070 Sum_probs=30.8
Q ss_pred HhHHHHhHHHHHhCCCCeEEEEEcCCH---------------HHHHHHHHhCCC
Q 038822 56 VPGFIEKADELQSKGVDEILCISVNDP---------------FVMKAWAKTFPK 94 (162)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~v~~is~d~~---------------~~~~~~~~~~~~ 94 (162)
.+...+..++++++|+ .+..+|..+. +...+.++++++
T Consensus 58 ~~g~~e~L~~L~~~G~-~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl 110 (218)
T 2o2x_A 58 RPQMLPAIATANRAGI-PVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGV 110 (218)
T ss_dssp CGGGHHHHHHHHHHTC-CEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTC
T ss_pred CcCHHHHHHHHHHCCC-EEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCC
Confidence 5777788888888898 8888888766 677888899886
No 377
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=22.79 E-value=1.1e+02 Score=21.88 Aligned_cols=59 Identities=12% Similarity=0.114 Sum_probs=39.1
Q ss_pred HhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCCceE-EEEcCCchHHHHcCCc
Q 038822 56 VPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNKSVK-FLADGSAKYTHALGLE 115 (162)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~~~~-~l~D~~~~~~~~~gv~ 115 (162)
.|...++.+.+++.|+ .+..+|.++.......++..++..-|. ++.+......+.+++.
T Consensus 165 ~~g~~~~l~~L~~~g~-~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~K~~~~~~l~~~ 224 (287)
T 3a1c_A 165 KESAKPAVQELKRMGI-KVGMITGDNWRSAEAISRELNLDLVIAEVLPHQKSEEVKKLQAK 224 (287)
T ss_dssp CTTHHHHHHHHHHTTC-EEEEECSSCHHHHHHHHHHHTCSEEECSCCTTCHHHHHHHHTTT
T ss_pred chhHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHhCCceeeeecChHHHHHHHHHHhcC
Confidence 4666777788888898 888888888888888888887621121 1122224455667654
No 378
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=22.68 E-value=1.6e+02 Score=19.93 Aligned_cols=38 Identities=21% Similarity=0.154 Sum_probs=28.9
Q ss_pred HhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCC
Q 038822 56 VPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPK 94 (162)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~ 94 (162)
.+...++.+.+++.|+ .+..+|..+.......++..++
T Consensus 96 ~~~~~~~l~~l~~~g~-~~~i~t~~~~~~~~~~l~~~~l 133 (241)
T 2hoq_A 96 VPGARKVLIRLKELGY-ELGIITDGNPVKQWEKILRLEL 133 (241)
T ss_dssp CTTHHHHHHHHHHHTC-EEEEEECSCHHHHHHHHHHTTC
T ss_pred CccHHHHHHHHHHCCC-EEEEEECCCchhHHHHHHHcCc
Confidence 3556677777777888 8888887777777788888876
No 379
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=22.46 E-value=96 Score=20.34 Aligned_cols=37 Identities=24% Similarity=0.288 Sum_probs=28.3
Q ss_pred hHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCC
Q 038822 57 PGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPK 94 (162)
Q Consensus 57 ~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~ 94 (162)
+...++.+.+++.|+ .+..+|.......+..++..++
T Consensus 85 ~~~~~~l~~l~~~g~-~~~i~s~~~~~~~~~~~~~~~~ 121 (219)
T 3kd3_A 85 DGIKELVQDLKNKGF-EIWIFSGGLSESIQPFADYLNI 121 (219)
T ss_dssp TTHHHHHHHHHHTTC-EEEEEEEEEHHHHHHHHHHHTC
T ss_pred hhHHHHHHHHHHCCC-eEEEEcCCcHHHHHHHHHHcCC
Confidence 456667777788888 7888888777777888888776
No 380
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=22.18 E-value=1.9e+02 Score=19.50 Aligned_cols=57 Identities=14% Similarity=0.202 Sum_probs=46.3
Q ss_pred CeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCC
Q 038822 36 KKVILFGVPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPK 94 (162)
Q Consensus 36 k~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~ 94 (162)
++=+|+..-|-.-|.+... ....+++.+++-+.+- .+++|+..+......|.++..+
T Consensus 84 ~~D~vVllGGLAMPk~~v~-~e~v~~li~ki~~~~~-kiiGvCFms~F~kagW~~~IdF 140 (157)
T 2r47_A 84 NVDVLVLLGGLSMPGIGSD-IEDVKKLVEDALEEGG-ELMGLCYMDMFARAGWYELLDF 140 (157)
T ss_dssp CEEEEEEEGGGGSTTTSCC-HHHHHHHHHHHEEEEE-EEEEEEETTHHHHTTHHHHSCC
T ss_pred CCCEEEEeccccCCCCCCC-HHHHHHHHHHhhcCCC-CEEEEEhHHHHHHcCCCccCCc
Confidence 5555666668889999997 8999999999843344 7999999999999999997754
No 381
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=21.82 E-value=1.8e+02 Score=19.07 Aligned_cols=33 Identities=9% Similarity=0.108 Sum_probs=25.9
Q ss_pred HhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCC
Q 038822 61 EKADELQSKGVDEILCISVNDPFVMKAWAKTFPK 94 (162)
Q Consensus 61 ~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~ 94 (162)
+..++++++|+ .++.+|..+.......+++.++
T Consensus 42 ~~l~~L~~~G~-~~~i~Tg~~~~~~~~~~~~lgl 74 (180)
T 1k1e_A 42 LGIKMLMDADI-QVAVLSGRDSPILRRRIADLGI 74 (180)
T ss_dssp HHHHHHHHTTC-EEEEEESCCCHHHHHHHHHHTC
T ss_pred HHHHHHHHCCC-eEEEEeCCCcHHHHHHHHHcCC
Confidence 56666777888 8888888877778888888876
No 382
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=21.76 E-value=1.1e+02 Score=20.31 Aligned_cols=59 Identities=10% Similarity=0.074 Sum_probs=41.1
Q ss_pred HhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCCCC--ceEEEEcCC----------chHHHHcCCc
Q 038822 56 VPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPKNK--SVKFLADGS----------AKYTHALGLE 115 (162)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~~~--~~~~l~D~~----------~~~~~~~gv~ 115 (162)
.+...++.+.+++.|+ .+..+|..........++..++.. ...+.+|.. ..+.+.+|+.
T Consensus 88 ~~~~~~~l~~l~~~g~-~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~ 158 (226)
T 3mc1_A 88 YDGIEALLSSLKDYGF-HLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIK 158 (226)
T ss_dssp CTTHHHHHHHHHHHTC-EEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCC
T ss_pred CcCHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcC
Confidence 4667777888888888 888888888888888888888632 233444422 2466777775
No 383
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=21.70 E-value=1.3e+02 Score=20.75 Aligned_cols=38 Identities=16% Similarity=0.072 Sum_probs=29.7
Q ss_pred HhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCC
Q 038822 56 VPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPK 94 (162)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~ 94 (162)
.+...++.+.+++.|+ .+..+|..+.......++..++
T Consensus 112 ~~~~~~~l~~l~~~g~-~~~i~s~~~~~~~~~~l~~~~l 149 (259)
T 4eek_A 112 IEGAAETLRALRAAGV-PFAIGSNSERGRLHLKLRVAGL 149 (259)
T ss_dssp CTTHHHHHHHHHHHTC-CEEEECSSCHHHHHHHHHHTTC
T ss_pred CccHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHhcCh
Confidence 3455667777777788 7888888888888888888886
No 384
>2j07_A Deoxyribodipyrimidine photo-lyase; flavoprotein, nucleotide-binding, DNA repair; HET: FAD HDF; 1.95A {Thermus thermophilus} SCOP: a.99.1.1 c.28.1.1 PDB: 1iqu_A* 1iqr_A* 2j08_A* 2j09_A*
Probab=21.67 E-value=1.5e+02 Score=23.06 Aligned_cols=38 Identities=5% Similarity=-0.008 Sum_probs=32.1
Q ss_pred HhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCC
Q 038822 56 VPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPK 94 (162)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~ 94 (162)
+..|.++.+++++.|. .++....+..+.+.++.++++.
T Consensus 51 ~~sL~~l~~~L~~~g~-~l~~~~g~~~~~l~~l~~~~~~ 88 (420)
T 2j07_A 51 LENVRALREAYRARGG-ALWVLEGLPWEKVPEAARRLKA 88 (420)
T ss_dssp HHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCC
Confidence 3447788888999999 8888888888999999999987
No 385
>2jya_A AGR_C_3324P, uncharacterized protein ATU1810; protein with unknown function ATU1810, ontario centre for ST proteomics, OCSP; NMR {Agrobacterium tumefaciens str}
Probab=21.26 E-value=92 Score=19.52 Aligned_cols=39 Identities=8% Similarity=-0.001 Sum_probs=24.3
Q ss_pred EEEEcCCHHHHHHHHHhCCCCCceEEEEcCCch-HHHHcCCc
Q 038822 75 LCISVNDPFVMKAWAKTFPKNKSVKFLADGSAK-YTHALGLE 115 (162)
Q Consensus 75 ~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~-~~~~~gv~ 115 (162)
+.+..++.|+..+|.+++|+ .|.|.-..... -.+.|+-.
T Consensus 54 v~L~F~skE~AiayAek~G~--~y~V~ep~~~~~r~ksYadN 93 (106)
T 2jya_A 54 VKLTFETQEQAEAYAQRKGI--EYRVILPKEATRKVVSYTDN 93 (106)
T ss_dssp EEEEESSHHHHHHHHHHHTC--EEEECCCTTC----------
T ss_pred ceEecCCHHHHHHHHHHcCC--EEEEeCCCcCcCCcCchHHh
Confidence 46788999999999999999 88777543322 23445443
No 386
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=21.26 E-value=1.2e+02 Score=22.55 Aligned_cols=55 Identities=9% Similarity=0.083 Sum_probs=34.7
Q ss_pred HHHhHHHHHhCCCCeEEEEEc-------CCHHHHHHHHHhCCCCCceEEEEcCCchHHHHcCCc
Q 038822 59 FIEKADELQSKGVDEILCISV-------NDPFVMKAWAKTFPKNKSVKFLADGSAKYTHALGLE 115 (162)
Q Consensus 59 l~~~~~~~~~~~~~~v~~is~-------d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 115 (162)
|.++.+..++.++..+.++.+ +..+-..+..+..|+ ++.+++..+......+|+.
T Consensus 70 L~~f~~~~~~~~v~~i~~vATsA~R~A~N~~~fl~~v~~~~G~--~i~vIsg~eEA~l~~~gv~ 131 (315)
T 1t6c_A 70 LKEYKKLIDEFKVERVKAVATEAIRRAKNAEEFLERVKREVGL--VVEVITPEQEGRYAYLAVA 131 (315)
T ss_dssp HHHHHHHHHHTTCSEEEEEECHHHHTSTTHHHHHHHHHHHTCC--CEEECCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCeEEEEEcHHHHcCcCHHHHHHHHHHHHCC--CEEEcCHHHHHHHHHHHHH
Confidence 555555556667745777765 233445555667888 9999998775554554543
No 387
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=21.18 E-value=18 Score=29.50 Aligned_cols=18 Identities=33% Similarity=0.521 Sum_probs=11.6
Q ss_pred CCeEEEEEeeCCCCCCCCcC
Q 038822 35 GKKVILFGVPGDFTPTCSLK 54 (162)
Q Consensus 35 gk~vvl~f~~~~~cp~C~~~ 54 (162)
.++++|+. ..|||.|..-
T Consensus 17 ~~~v~vy~--~~~Cp~C~~~ 34 (598)
T 2x8g_A 17 SAAVILFS--KTTCPYCKKV 34 (598)
T ss_dssp HCSEEEEE--CTTCHHHHHH
T ss_pred cCCEEEEE--CCCChhHHHH
Confidence 34444433 6799999984
No 388
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=21.17 E-value=2.9e+02 Score=21.37 Aligned_cols=36 Identities=22% Similarity=0.154 Sum_probs=30.8
Q ss_pred HhHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhC
Q 038822 56 VPGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTF 92 (162)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~ 92 (162)
.+.+.++.+.++++|+ .+..+|..+.+..++.++++
T Consensus 258 ypgv~e~L~~Lk~~Gi-~laI~Snn~~~~v~~~l~~~ 293 (387)
T 3nvb_A 258 FTEFQEWVKKLKNRGI-IIAVCSKNNEGKAKEPFERN 293 (387)
T ss_dssp HHHHHHHHHHHHHTTC-EEEEEEESCHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHhhc
Confidence 4678888999999999 88888998888899999873
No 389
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=21.07 E-value=95 Score=20.92 Aligned_cols=37 Identities=22% Similarity=0.264 Sum_probs=27.5
Q ss_pred hHHHHhHHHHHhCCCCeEEEEEcCCHHHHHHHHHhCCC
Q 038822 57 PGFIEKADELQSKGVDEILCISVNDPFVMKAWAKTFPK 94 (162)
Q Consensus 57 ~~l~~~~~~~~~~~~~~v~~is~d~~~~~~~~~~~~~~ 94 (162)
+...++.+.+++.|+ .+..+|..+.......++..++
T Consensus 107 ~~~~~~l~~l~~~g~-~~~i~s~~~~~~~~~~l~~~~l 143 (237)
T 4ex6_A 107 PGVLEGLDRLSAAGF-RLAMATSKVEKAARAIAELTGL 143 (237)
T ss_dssp TTHHHHHHHHHHTTE-EEEEECSSCHHHHHHHHHHHTG
T ss_pred CCHHHHHHHHHhCCC-cEEEEcCCChHHHHHHHHHcCc
Confidence 445566777777788 7888888777777778887775
No 390
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=20.59 E-value=1.6e+02 Score=18.11 Aligned_cols=53 Identities=13% Similarity=-0.003 Sum_probs=34.7
Q ss_pred HHhHHHHHhCCCCeEEEEEcCCHHHHH----HHHHhCCCCCceEEEEcCCchHHHHcCCc
Q 038822 60 IEKADELQSKGVDEILCISVNDPFVMK----AWAKTFPKNKSVKFLADGSAKYTHALGLE 115 (162)
Q Consensus 60 ~~~~~~~~~~~~~~v~~is~d~~~~~~----~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 115 (162)
.+..+.++...+ .++.++.|-+.... .+.+.++. |+-.+.....++++..|..
T Consensus 27 ~~v~kai~~gka-~lViiA~D~~~~~~~~l~~~c~~~~V--p~~~~~~sk~eLG~a~G~~ 83 (110)
T 3cpq_A 27 KRTIKFVKHGEG-KLVVLAGNIPKDLEEDVKYYAKLSNI--PVYQHKITSLELGAVCGKP 83 (110)
T ss_dssp HHHHHHHHTTCC-SEEEECTTCBHHHHHHHHHHHHHTTC--CEEECCSCHHHHHHHTTCS
T ss_pred HHHHHHHHcCCc-eEEEEeCCCCHHHHHHHHHHHHHcCC--CEEEEcCCHHHHHHHhCCc
Confidence 344555565566 78888888655443 45566665 5544446678899999875
No 391
>3twl_A Formamidopyrimidine-DNA glycosylase 1; helix two turns helix, zinc-LESS finger, hydrolase, DNA DAMA repair, DNA-binding, glycosidase, lyase; 1.70A {Arabidopsis thaliana} PDB: 3twm_A* 3twk_A
Probab=20.58 E-value=25 Score=26.52 Aligned_cols=17 Identities=12% Similarity=0.008 Sum_probs=10.0
Q ss_pred eCCCCCCCCcCCHhHHHH
Q 038822 44 PGDFTPTCSLKHVPGFIE 61 (162)
Q Consensus 44 ~~~~cp~C~~~~~~~l~~ 61 (162)
.+.|||.|++. -+.-.+
T Consensus 268 ~t~~CP~CQ~~-~~~~~~ 284 (310)
T 3twl_A 268 TTAYVPELQKL-YGKDAE 284 (310)
T ss_dssp ---ECTTTCCC-CHHHHH
T ss_pred ccEECCCCcCC-CCCCcc
Confidence 35679999996 554333
No 392
>2lju_A Putative oxidoreductase; structural genomics, seattle structural GENO center for infectious disease, ssgcid; NMR {Ehrlichia chaffeensis}
Probab=20.56 E-value=1.2e+02 Score=19.02 Aligned_cols=28 Identities=21% Similarity=0.301 Sum_probs=23.6
Q ss_pred EEEcCCHHHHHHHHHhCCCCCceEEEEcCC
Q 038822 76 CISVNDPFVMKAWAKTFPKNKSVKFLADGS 105 (162)
Q Consensus 76 ~is~d~~~~~~~~~~~~~~~~~~~~l~D~~ 105 (162)
.+..++.|+..+|.+++|+ .|.|.-...
T Consensus 63 ~L~F~skE~AiayAek~G~--~y~V~ep~~ 90 (108)
T 2lju_A 63 CLSFTTRELAIAYAVAHKI--DYTVLQDNP 90 (108)
T ss_dssp CEEESSHHHHHHHHHHTTC--EEEEECSSC
T ss_pred eEecCCHHHHHHHHHHcCC--EEEEecCCc
Confidence 5788999999999999999 888875433
No 393
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=20.52 E-value=2e+02 Score=21.36 Aligned_cols=42 Identities=12% Similarity=0.091 Sum_probs=28.7
Q ss_pred CCeEEEEEeeCCCCCCCCcCCHhHHHHhHHHHHhC-CCCeEEEEEc
Q 038822 35 GKKVILFGVPGDFTPTCSLKHVPGFIEKADELQSK-GVDEILCISV 79 (162)
Q Consensus 35 gk~vvl~f~~~~~cp~C~~~~~~~l~~~~~~~~~~-~~~~v~~is~ 79 (162)
..++||+++-+.||..... ...+..+...+... |+ .|+.+..
T Consensus 111 ~~Pvvv~~HGGg~~~g~~~--~~~~~~~~~~la~~~g~-~Vv~~dy 153 (365)
T 3ebl_A 111 PFPVIIFFHGGSFVHSSAS--STIYDSLCRRFVKLSKG-VVVSVNY 153 (365)
T ss_dssp CCEEEEEECCSTTTSCCTT--BHHHHHHHHHHHHHHTS-EEEEECC
T ss_pred cceEEEEEcCCccccCCCc--hhhHHHHHHHHHHHCCC-EEEEeeC
Confidence 3489999998778766555 24556666666554 88 7887753
No 394
>3f6d_A Adgstd4-4, glutathione transferase GST1-4; HET: GTX; 1.70A {Anopheles dirus} PDB: 3f63_A* 1jlw_A* 3g7i_A* 3g7j_A*
Probab=20.43 E-value=24 Score=24.12 Aligned_cols=55 Identities=9% Similarity=0.045 Sum_probs=29.4
Q ss_pred eeCCCCCCCCcCCHhHHHHhHHHHHhCCCCeEEEEEcCCHH-HHHHHHHhCCCCCceEEEEcCC
Q 038822 43 VPGDFTPTCSLKHVPGFIEKADELQSKGVDEILCISVNDPF-VMKAWAKTFPKNKSVKFLADGS 105 (162)
Q Consensus 43 ~~~~~cp~C~~~~~~~l~~~~~~~~~~~~~~v~~is~d~~~-~~~~~~~~~~~~~~~~~l~D~~ 105 (162)
|....||.|.+- .+.-+..+..+ ++.-++....+ ....|.+.+.. ...|++.|++
T Consensus 4 y~~~~s~~~~~v------~~~L~~~gi~y-e~~~v~~~~~~~~~~~~~~~~P~-g~vP~L~~~~ 59 (219)
T 3f6d_A 4 YYLPGSAPCRAV------QMTAAAVGVEL-NLKLTNLMAGEHMKPEFLKLNPQ-HCIPTLVDED 59 (219)
T ss_dssp EECTTCHHHHHH------HHHHHHHTCCC-EEEECCTTTTGGGSHHHHHHCTT-CCSCEEECTT
T ss_pred EeCCCCCchHHH------HHHHHHcCCCc-eEEEccCcccccCCHHHHhhCCC-CccCeEEeCC
Confidence 334568877763 23322333445 56666554322 22346666653 4788888744
No 395
>3cwf_A Alkaline phosphatase synthesis sensor protein PHO; PAS domain, alkaline phosphatase synthesi protein PHOR, structural genomics, PSI-2; HET: EPE; 2.20A {Bacillus subtilis subsp}
Probab=20.33 E-value=65 Score=19.83 Aligned_cols=15 Identities=20% Similarity=0.098 Sum_probs=10.9
Q ss_pred eEEEEEcCCeEEEEE
Q 038822 129 RFALLVDDLKVKAAN 143 (162)
Q Consensus 129 ~~~~ii~~g~i~~~~ 143 (162)
|.++|..+|+|++--
T Consensus 50 rItiiD~~G~Vl~dS 64 (122)
T 3cwf_A 50 SASVIDTDGKVLYGS 64 (122)
T ss_dssp EEEEEETTSCEEEET
T ss_pred EEEEECCCCcEEEeC
Confidence 446666699999865
No 396
>3op6_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 2.00A {Legionella pneumophila subsp}
Probab=20.22 E-value=1.9e+02 Score=18.75 Aligned_cols=32 Identities=6% Similarity=0.020 Sum_probs=18.6
Q ss_pred HHHHHHHHHhCCCCCceEEEEcCC----chHHHHcCCc
Q 038822 82 PFVMKAWAKTFPKNKSVKFLADGS----AKYTHALGLE 115 (162)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~D~~----~~~~~~~gv~ 115 (162)
.+...+++++++. +|..+.-+. .++++.+|+.
T Consensus 4 ~~~v~~~L~~~~i--~~~~~~~~~~~t~~~~a~~lg~~ 39 (152)
T 3op6_A 4 VKKLKQFLDSHKI--KYLSIAHSPAYTAQEIAASAHVS 39 (152)
T ss_dssp HHHHHHHHHHTTC--CEEEEEECTTCCHHHHC----CC
T ss_pred HHHHHHHHHHcCC--ceEEEEcCCCCCHHHHHHHcCCC
Confidence 4578889999998 887765333 2344555654
Done!