BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038823
(338 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 135/284 (47%), Gaps = 16/284 (5%)
Query: 61 FSAKELEIATNNYDERKFIKQDSTYKLYKGFWQE-RLISVMKYNESYSDSACKFSINNIV 119
FS +EL++A++N+ + + + K+YKG + L++V + E + +
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 120 YAAQMDHKHILKLIGCCLETPIPILVFEY---GEYTT-LRDRIFGAPQPHFEPLLLKHRL 175
+ H+++L+L G C+ +LV+ Y G + LR+R P PL R
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP-----PLDWPKRQ 134
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
++A+G A LAYLH I+ ++ + IL +EE A + DF + + + H+
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA 194
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQSTRDLLR-THGSVRHLIEYLK 294
R G + APEY G +EK DV+ + +LLEL+TGQ DL R + L++++K
Sbjct: 195 VR-GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253
Query: 295 NYLQNNRFTEIADPIIVQDLSCTETEHQFQACARLTLECLNESP 338
L+ + + D DL + + + ++ L C SP
Sbjct: 254 GLLKEKKLEALVDV----DLQGNYKDEEVEQLIQVALLCTQSSP 293
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 133/284 (46%), Gaps = 16/284 (5%)
Query: 61 FSAKELEIATNNYDERKFIKQDSTYKLYKGFWQERLISVMKYNESYSDSACKFSINNIVY 120
FS +EL++A++N+ + + + K+YKG + + +K + + V
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 121 AAQMD-HKHILKLIGCCLETPIPILVFEY---GEYTT-LRDRIFGAPQPHFEPLLLKHRL 175
M H+++L+L G C+ +LV+ Y G + LR+R P PL R
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP-----PLDWPKRQ 142
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
++A+G A LAYLH I+ ++ + IL +EE A + DF + + + H+
Sbjct: 143 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA 202
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQSTRDLLR-THGSVRHLIEYLK 294
R G + APEY G +EK DV+ + +LLEL+TGQ DL R + L++++K
Sbjct: 203 VR-GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 261
Query: 295 NYLQNNRFTEIADPIIVQDLSCTETEHQFQACARLTLECLNESP 338
L+ + + D DL + + + ++ L C SP
Sbjct: 262 GLLKEKKLEALVDV----DLQGNYKDEEVEQLIQVALLCTQSSP 301
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 118/247 (47%), Gaps = 11/247 (4%)
Query: 65 ELEIATNNYDERKFIKQDSTYKLYKGFWQERLISVMKYNESYSDSACKFSINNIVYAAQM 124
+LE ATNN+D + I K+YKG ++ +K S + I +
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 125 DHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHA 184
H H++ LIG C E IL+++Y E L+ ++G+ P + + RL++ +G A
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS-MSWEQRLEICIGAARG 151
Query: 185 LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPE-GETHIITRSRFGAWTY 243
L YLH R I+ ++ S+ IL +E V K+ DF S E G+TH+ + G Y
Sbjct: 152 LHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVK-GTLGY 207
Query: 244 SAPEYKRGGVFNEKLDVYTFSTVLLELLTGQST--RDLLRTHGSVRHLIEYLKNYLQNNR 301
PEY G EK DVY+F VL E+L +S + L R + +L E+ N +
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR---EMVNLAEWAVESHNNGQ 264
Query: 302 FTEIADP 308
+I DP
Sbjct: 265 LEQIVDP 271
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 117/247 (47%), Gaps = 11/247 (4%)
Query: 65 ELEIATNNYDERKFIKQDSTYKLYKGFWQERLISVMKYNESYSDSACKFSINNIVYAAQM 124
+LE ATNN+D + I K+YKG ++ +K S + I +
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 125 DHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHA 184
H H++ LIG C E IL+++Y E L+ ++G+ P + + RL++ +G A
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS-MSWEQRLEICIGAARG 151
Query: 185 LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPE-GETHIITRSRFGAWTY 243
L YLH R I+ ++ S+ IL +E V K+ DF S E +TH+ + G Y
Sbjct: 152 LHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVK-GTLGY 207
Query: 244 SAPEYKRGGVFNEKLDVYTFSTVLLELLTGQST--RDLLRTHGSVRHLIEYLKNYLQNNR 301
PEY G EK DVY+F VL E+L +S + L R + +L E+ N +
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR---EMVNLAEWAVESHNNGQ 264
Query: 302 FTEIADP 308
+I DP
Sbjct: 265 LEQIVDP 271
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 21/233 (9%)
Query: 58 YRIFSAKELEIATNNYDERKF------IKQDSTYKLYKGFWQERLISVMKYNESYSDSAC 111
+ FS EL+ TNN+DER + + +YKG+ ++V K +
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 65
Query: 112 KFS---INNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIF---GAPQPH 165
+ I A+ H+++++L+G + LV+ Y +L DR+ G P
Sbjct: 66 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP--- 122
Query: 166 FEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISI 225
PL R K+A G A+ + +LH + ++ S IL +E AK+ DF + +
Sbjct: 123 --PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARAS 177
Query: 226 PEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
+ ++ G Y APE RG + K D+Y+F VLLE++TG D
Sbjct: 178 EKFAQXVMXXRIVGTTAYMAPEALRGEI-TPKSDIYSFGVVLLEIITGLPAVD 229
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 21/228 (9%)
Query: 58 YRIFSAKELEIATNNYDERKF------IKQDSTYKLYKGFWQERLISVMKYNESYSDSAC 111
+ FS EL+ TNN+DER + + +YKG+ ++V K +
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 71
Query: 112 KFS---INNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIF---GAPQPH 165
+ I A+ H+++++L+G + LV+ Y +L DR+ G P
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP--- 128
Query: 166 FEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISI 225
PL R K+A G A+ + +LH + ++ S IL +E AK+ DF + +
Sbjct: 129 --PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARAS 183
Query: 226 PEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
+ ++ G Y APE RG + K D+Y+F VLLE++TG
Sbjct: 184 EKFAQTVMXSRIVGTTAYMAPEALRGEI-TPKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 21/228 (9%)
Query: 58 YRIFSAKELEIATNNYDERKF------IKQDSTYKLYKGFWQERLISVMKYNESYSDSAC 111
+ FS EL+ TNN+DER + + +YKG+ ++V K +
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 71
Query: 112 KFS---INNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIF---GAPQPH 165
+ I A+ H+++++L+G + LV+ Y +L DR+ G P
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP--- 128
Query: 166 FEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISI 225
PL R K+A G A+ + +LH + ++ S IL +E AK+ DF + +
Sbjct: 129 --PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARAS 183
Query: 226 PEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
+ ++ G Y APE RG + K D+Y+F VLLE++TG
Sbjct: 184 EKFAQTVMXXRIVGTTAYMAPEALRGEI-TPKSDIYSFGVVLLEIITG 230
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 21/228 (9%)
Query: 58 YRIFSAKELEIATNNYDERKF------IKQDSTYKLYKGFWQERLISVMKYNESYSDSAC 111
+ FS EL+ TNN+DER + +YKG+ ++V K +
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 62
Query: 112 KFS---INNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIF---GAPQPH 165
+ I A+ H+++++L+G + LV+ Y +L DR+ G P
Sbjct: 63 ELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP--- 119
Query: 166 FEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISI 225
PL R K+A G A+ + +LH + ++ S IL +E AK+ DF + +
Sbjct: 120 --PLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARAS 174
Query: 226 PEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
+ + G Y APE RG + K D+Y+F VLLE++TG
Sbjct: 175 EKFAQXVXXSRIVGTTAYXAPEALRGEI-TPKSDIYSFGVVLLEIITG 221
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 24/210 (11%)
Query: 89 KGFWQERLISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY 148
K W+ + +++ + S+S K I + ++++H +I+KL G CL P+ LV EY
Sbjct: 27 KAKWRAKDVAIKQIE---SESERKAFIVELRQLSRVNHPNIVKLYGACL-NPV-CLVMEY 81
Query: 149 GEYTTLRDRIFGA-PQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISL-CI 206
E +L + + GA P P++ H + + + +AYLH P+ ++ +L +
Sbjct: 82 AEGGSLYNVLHGAEPLPYY---TAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLL 138
Query: 207 LFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTV 266
L V K+ DF + I +TH+ AW APE G ++EK DV+++ +
Sbjct: 139 LVAGGTVLKICDFGTACDI---QTHMTNNKGSAAWM--APEVFEGSNYSEKCDVFSWGII 193
Query: 267 LLELLT---------GQSTRDLLRTHGSVR 287
L E++T G + R + H R
Sbjct: 194 LWEVITRRKPFDEIGGPAFRIMWAVHNGTR 223
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 24/210 (11%)
Query: 89 KGFWQERLISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY 148
K W+ + +++ + S+S K I + ++++H +I+KL G CL P+ LV EY
Sbjct: 26 KAKWRAKDVAIKQIE---SESERKAFIVELRQLSRVNHPNIVKLYGACL-NPV-CLVMEY 80
Query: 149 GEYTTLRDRIFGA-PQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISL-CI 206
E +L + + GA P P++ H + + + +AYLH P+ ++ +L +
Sbjct: 81 AEGGSLYNVLHGAEPLPYY---TAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLL 137
Query: 207 LFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTV 266
L V K+ DF + I +TH+ AW APE G ++EK DV+++ +
Sbjct: 138 LVAGGTVLKICDFGTACDI---QTHMTNNKGSAAWM--APEVFEGSNYSEKCDVFSWGII 192
Query: 267 LLELLT---------GQSTRDLLRTHGSVR 287
L E++T G + R + H R
Sbjct: 193 LWEVITRRKPFDEIGGPAFRIMWAVHNGTR 222
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 25/202 (12%)
Query: 86 KLYKGFWQERLISVMKYNESYSDSACKFSINNIVYAAQM----DHKHILKLIGCCLETPI 141
K+Y+ FW ++V K D +I N+ A++ H +I+ L G CL+ P
Sbjct: 22 KVYRAFWIGDEVAV-KAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPN 80
Query: 142 PILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNL 201
LV E+ L + G P P +L + A+ IA + YLH PI+ +L
Sbjct: 81 LCLVMEFARGGPLNRVLSGKRIP---PDIL---VNWAVQIARGMNYLHDEAIVPIIHRDL 134
Query: 202 IS--LCILFNEEN------VAKLFDFSESISIPEGETHIITR-SRFGAWTYSAPEYKRGG 252
S + IL EN + K+ DF + E H T+ S GA+ + APE R
Sbjct: 135 KSSNILILQKVENGDLSNKILKITDFGLA-----REWHRTTKMSAAGAYAWMAPEVIRAS 189
Query: 253 VFNEKLDVYTFSTVLLELLTGQ 274
+F++ DV+++ +L ELLTG+
Sbjct: 190 MFSKGSDVWSYGVLLWELLTGE 211
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 121 AAQMDHKHILKLIGCC-LETP---IPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRL 175
AA ++H I+ + ETP +P +V EY + TLRD + H E P+ K +
Sbjct: 66 AAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 119
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPE-GETHIIT 234
+V AL + H I+ ++ I+ + N K+ DF + +I + G + T
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 235 RSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
+ G Y +PE RG + + DVY+ VL E+LTG+
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 12/218 (5%)
Query: 61 FSAKELEIATNNYDERKFIKQDSTYKLYKGFWQ--ERLISVMKYNESYSDSACKFSINNI 118
+++I + + ++ I S +++ W + + ++ + +++ +F + +
Sbjct: 27 MDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEF-LREV 85
Query: 119 VYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIF--GAPQPHFEPLLLKHRLK 176
++ H +I+ +G + P +V EY +L + GA E L + RL
Sbjct: 86 AIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGA----REQLDERRRLS 141
Query: 177 VAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRS 236
+A +A + YLH P PIV NL S +L +++ K+ DF +S + T + ++S
Sbjct: 142 MAYDVAKGMNYLHNRNP-PIVHRNLKSPNLLVDKKYTVKVCDFG--LSRLKASTFLSSKS 198
Query: 237 RFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
G + APE R NEK DVY+F +L EL T Q
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQ 236
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 121 AAQMDHKHILKLIGCC-LETP---IPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRL 175
AA ++H I+ + ETP +P +V EY + TLRD + H E P+ K +
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 119
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPE-GETHIIT 234
+V AL + H I+ ++ I+ + N K+ DF + +I + G + T
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 235 RSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
+ G Y +PE RG + + DVY+ VL E+LTG+
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 121 AAQMDHKHILKLIGCC-LETP---IPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRL 175
AA ++H I+ + ETP +P +V EY + TLRD + H E P+ K +
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 119
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPE-GETHIIT 234
+V AL + H I+ ++ IL + N K+ DF + +I + G + T
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQT 176
Query: 235 RSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
+ G Y +PE RG + + DVY+ VL E+LTG+
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 121 AAQMDHKHILKLIGCC-LETP---IPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRL 175
AA ++H I+ + ETP +P +V EY + TLRD + H E P+ K +
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 119
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPE-GETHIIT 234
+V AL + H I+ ++ I+ + N K+ DF + +I + G + T
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 235 RSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
+ G Y +PE RG + + DVY+ VL E+LTG+
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 121 AAQMDHKHILKLIGCC-LETP---IPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRL 175
AA ++H I+ + ETP +P +V EY + TLRD + H E P+ K +
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 119
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPE-GETHIIT 234
+V AL + H I+ ++ I+ + N K+ DF + +I + G + T
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 235 RSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
+ G Y +PE RG + + DVY+ VL E+LTG+
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 121 AAQMDHKHILKLIGCC-LETP---IPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRL 175
AA ++H I+ + ETP +P +V EY + TLRD + H E P+ K +
Sbjct: 83 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 136
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPE-GETHIIT 234
+V IA A L+ I+ ++ I+ + N K+ DF + +I + G + T
Sbjct: 137 EV---IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 193
Query: 235 RSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
+ G Y +PE RG + + DVY+ VL E+LTG+
Sbjct: 194 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 100/218 (45%), Gaps = 12/218 (5%)
Query: 61 FSAKELEIATNNYDERKFIKQDSTYKLYKGFWQ--ERLISVMKYNESYSDSACKFSINNI 118
+++I + + ++ I S +++ W + + ++ + +++ +F + +
Sbjct: 27 MDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEF-LREV 85
Query: 119 VYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIF--GAPQPHFEPLLLKHRLK 176
++ H +I+ +G + P +V EY +L + GA E L + RL
Sbjct: 86 AIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGA----REQLDERRRLS 141
Query: 177 VAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRS 236
+A +A + YLH P PIV +L S +L +++ K+ DF +S + + ++
Sbjct: 142 MAYDVAKGMNYLHNRNP-PIVHRDLKSPNLLVDKKYTVKVCDFG--LSRLKASXFLXSKX 198
Query: 237 RFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
G + APE R NEK DVY+F +L EL T Q
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQ 236
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 12/150 (8%)
Query: 126 HKHILKLIGCCLETPIPIL--VFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAH 183
H+HI+K GCC + L V EY +LRD + P+ + L L A I
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PR---HSIGLAQLLLFAQQICE 128
Query: 184 ALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWT- 242
+AYLH + + NL + +L + + + K+ DF + ++PEG + R +
Sbjct: 129 GMAYLHA---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 185
Query: 243 YSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE + F DV++F L ELLT
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 12/150 (8%)
Query: 126 HKHILKLIGCCLETPIPI--LVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAH 183
H+HI+K GCC + LV EY +LRD + P+ + L L A I
Sbjct: 92 HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL---PR---HSIGLAQLLLFAQQICE 145
Query: 184 ALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEG-ETHIITRSRFGAWT 242
+AYLH + + +L + +L + + + K+ DF + ++PEG E + +
Sbjct: 146 GMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVF 202
Query: 243 YSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE + F DV++F L ELLT
Sbjct: 203 WYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 12/150 (8%)
Query: 126 HKHILKLIGCCLETPIPIL--VFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAH 183
H+HI+K GCC + L V EY +LRD + P+ + L L A I
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PR---HSIGLAQLLLFAQQICE 128
Query: 184 ALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWT- 242
+AYLH + + NL + +L + + + K+ DF + ++PEG + R +
Sbjct: 129 GMAYLHS---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 185
Query: 243 YSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE + F DV++F L ELLT
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 14/185 (7%)
Query: 126 HKHILKLIGCCLETPIPI--LVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAH 183
H+HI+K GCC + LV EY +LRD + + LL ++ M H
Sbjct: 69 HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLH 128
Query: 184 ALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWT- 242
A Y+H R + N +L + + + K+ DF + ++PEG + R +
Sbjct: 129 AQHYIH----RALAARN-----VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 179
Query: 243 YSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQSTRDLLRTHGSVRHLIEYLKNYLQNNRF 302
+ APE + F DV++F L ELLT + H LI + + + R
Sbjct: 180 WYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQ--SPHTKFTELIGHTQGQMTVLRL 237
Query: 303 TEIAD 307
TE+ +
Sbjct: 238 TELLE 242
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 14/185 (7%)
Query: 126 HKHILKLIGCCLETPIPI--LVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAH 183
H+HI+K GCC + LV EY +LRD + + LL ++ M H
Sbjct: 70 HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLH 129
Query: 184 ALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWT- 242
A Y+H R + N +L + + + K+ DF + ++PEG + R +
Sbjct: 130 AQHYIH----RALAARN-----VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 180
Query: 243 YSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQSTRDLLRTHGSVRHLIEYLKNYLQNNRF 302
+ APE + F DV++F L ELLT + H LI + + + R
Sbjct: 181 WYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQ--SPHTKFTELIGHTQGQMTVLRL 238
Query: 303 TEIAD 307
TE+ +
Sbjct: 239 TELLE 243
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 90/216 (41%), Gaps = 11/216 (5%)
Query: 62 SAKELEIATNNYDERKFIKQDSTYKLYKGFWQERLISVMKYNESYSDSACKFSINNIVYA 121
S+ + EI + I S +YKG W + M + + + N +
Sbjct: 15 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ H +IL +G + + I V ++ E ++L + A + FE +K + +A
Sbjct: 75 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH-ASETKFE---MKKLIDIARQT 129
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
A + YLH + I+ +L S I +E+N K+ DF + G+
Sbjct: 130 ARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSI 186
Query: 242 TYSAPEYKR---GGVFNEKLDVYTFSTVLLELLTGQ 274
+ APE R ++ + DVY F VL EL+TGQ
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 94/217 (43%), Gaps = 17/217 (7%)
Query: 66 LEIATNNYDERKFIKQDSTYK----------LYKGFWQERLISVMKYNESYSDSACKFSI 115
++ ++ NYD+ + + D T K +Y+G W++ ++V + +
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 62
Query: 116 NNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRL 175
++ H ++++L+G C P ++ E+ Y L D + + ++L L
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL---L 119
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
+A I+ A+ YL + + +L + L E ++ K+ DF S + G+T+
Sbjct: 120 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHA 175
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE F+ K DV+ F +L E+ T
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 11/155 (7%)
Query: 121 AAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMG 180
++Q+ H++I+ +I E LV EY E TL + I + H PL + +
Sbjct: 65 SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI----ESHG-PLSVDTAINFTNQ 119
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHII-TRSRFG 239
I + + H IV ++ IL + K+FDF I+ ET + T G
Sbjct: 120 ILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFG--IAKALSETSLTQTNHVLG 174
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y +PE +G +E D+Y+ VL E+L G+
Sbjct: 175 TVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 90/211 (42%), Gaps = 17/211 (8%)
Query: 72 NYDERKFIKQDSTYK----------LYKGFWQERLISVMKYNESYSDSACKFSINNIVYA 121
NYD+ + + D T K +Y+G W++ ++V + +
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 270
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
++ H ++++L+G C P ++ E+ Y L D + + ++L L +A I
Sbjct: 271 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQI 327
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
+ A+ YL + + NL + L E ++ K+ DF S + G+T+
Sbjct: 328 SSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPI 383
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE F+ K DV+ F +L E+ T
Sbjct: 384 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 90/211 (42%), Gaps = 17/211 (8%)
Query: 72 NYDERKFIKQDSTYK----------LYKGFWQERLISVMKYNESYSDSACKFSINNIVYA 121
NYD+ + + D T K +Y+G W++ ++V + +
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 267
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
++ H ++++L+G C P ++ E+ Y L D + + ++L L +A I
Sbjct: 268 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQI 324
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
+ A+ YL + + NL + L E ++ K+ DF S + G+T+
Sbjct: 325 SSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPI 380
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE F+ K DV+ F +L E+ T
Sbjct: 381 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 11/216 (5%)
Query: 62 SAKELEIATNNYDERKFIKQDSTYKLYKGFWQERLISVMKYNESYSDSACKFSINNIVYA 121
+A + EI + I S +YKG W + M + + + N +
Sbjct: 15 AADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ H +IL +G P +V ++ E ++L + A + FE +K + +A
Sbjct: 75 RKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLH-ASETKFE---MKKLIDIARQT 129
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
A + YLH + I+ +L S I +E+N K+ DF + G+
Sbjct: 130 ARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSI 186
Query: 242 TYSAPEYKR---GGVFNEKLDVYTFSTVLLELLTGQ 274
+ APE R ++ + DVY F VL EL+TGQ
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 90/211 (42%), Gaps = 17/211 (8%)
Query: 72 NYDERKFIKQDSTYK----------LYKGFWQERLISVMKYNESYSDSACKFSINNIVYA 121
NYD+ + + D T K +Y+G W++ ++V + +
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 309
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
++ H ++++L+G C P ++ E+ Y L D + + ++L L +A I
Sbjct: 310 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQI 366
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
+ A+ YL + + NL + L E ++ K+ DF S + G+T+
Sbjct: 367 SSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPI 422
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE F+ K DV+ F +L E+ T
Sbjct: 423 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 90/216 (41%), Gaps = 11/216 (5%)
Query: 62 SAKELEIATNNYDERKFIKQDSTYKLYKGFWQERLISVMKYNESYSDSACKFSINNIVYA 121
S+ + EI + I S +YKG W + M + + + N +
Sbjct: 3 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 62
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ H +IL +G + + I V ++ E ++L + A + FE +K + +A
Sbjct: 63 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH-ASETKFE---MKKLIDIARQT 117
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
A + YLH + I+ +L S I +E+N K+ DF + G+
Sbjct: 118 ARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSI 174
Query: 242 TYSAPEYKR---GGVFNEKLDVYTFSTVLLELLTGQ 274
+ APE R ++ + DVY F VL EL+TGQ
Sbjct: 175 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 91/214 (42%), Gaps = 17/214 (7%)
Query: 69 ATNNYDERKFIKQDSTYK----------LYKGFWQERLISVMKYNESYSDSACKFSINNI 118
+ NYD+ + + D T K +Y+G W++ ++V + +
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 60
Query: 119 VYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVA 178
++ H ++++L+G C P ++ E+ Y L D + + ++L L +A
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL---LYMA 117
Query: 179 MGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRF 238
I+ A+ YL + + +L + L E ++ K+ DF S + G+T+
Sbjct: 118 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAK 173
Query: 239 GAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE F+ K DV+ F +L E+ T
Sbjct: 174 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 91/214 (42%), Gaps = 17/214 (7%)
Query: 69 ATNNYDERKFIKQDSTYK----------LYKGFWQERLISVMKYNESYSDSACKFSINNI 118
+ NYD+ + + D T K +Y+G W++ ++V + +
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 60
Query: 119 VYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVA 178
++ H ++++L+G C P ++ E+ Y L D + + ++L L +A
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL---LYMA 117
Query: 179 MGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRF 238
I+ A+ YL + + +L + L E ++ K+ DF S + G+T+
Sbjct: 118 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAK 173
Query: 239 GAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE F+ K DV+ F +L E+ T
Sbjct: 174 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 94/217 (43%), Gaps = 17/217 (7%)
Query: 66 LEIATNNYDERKFIKQDSTYK----------LYKGFWQERLISVMKYNESYSDSACKFSI 115
++ ++ NYD+ + + D T K +Y+G W++ ++V + +
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 62
Query: 116 NNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRL 175
++ H ++++L+G C P ++ E+ Y L D + + ++L L
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---L 119
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
+A I+ A+ YL + + +L + L E ++ K+ DF S + G+T+
Sbjct: 120 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHA 175
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE F+ K DV+ F +L E+ T
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 94/217 (43%), Gaps = 17/217 (7%)
Query: 66 LEIATNNYDERKFIKQDSTYK----------LYKGFWQERLISVMKYNESYSDSACKFSI 115
++ ++ NYD+ + + D T K +Y+G W++ ++V + +
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 62
Query: 116 NNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRL 175
++ H ++++L+G C P ++ E+ Y L D + + ++L L
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---L 119
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
+A I+ A+ YL + + +L + L E ++ K+ DF S + G+T+
Sbjct: 120 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHA 175
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE F+ K DV+ F +L E+ T
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 94/217 (43%), Gaps = 17/217 (7%)
Query: 66 LEIATNNYDERKFIKQDSTYK----------LYKGFWQERLISVMKYNESYSDSACKFSI 115
++ ++ NYD+ + + D T K +Y+G W++ ++V + +
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 62
Query: 116 NNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRL 175
++ H ++++L+G C P ++ E+ Y L D + + ++L L
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---L 119
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
+A I+ A+ YL + + +L + L E ++ K+ DF S + G+T+
Sbjct: 120 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHA 175
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE F+ K DV+ F +L E+ T
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 90/211 (42%), Gaps = 17/211 (8%)
Query: 72 NYDERKFIKQDSTYK----------LYKGFWQERLISVMKYNESYSDSACKFSINNIVYA 121
NYD+ + + D T K +Y+G W++ ++V + +
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
++ H ++++L+G C P ++ E+ Y L D + + ++L L +A I
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQI 122
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
+ A+ YL + + +L + L E ++ K+ DF S + G+T+
Sbjct: 123 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAPAGAKFPI 178
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE F+ K DV+ F +L E+ T
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 90/211 (42%), Gaps = 17/211 (8%)
Query: 72 NYDERKFIKQDSTYK----------LYKGFWQERLISVMKYNESYSDSACKFSINNIVYA 121
NYD+ + + D T K +Y+G W++ ++V + +
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 64
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
++ H ++++L+G C P ++ E+ Y L D + + ++L L +A I
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQI 121
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
+ A+ YL + + +L + L E ++ K+ DF S + G+T+
Sbjct: 122 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAPAGAKFPI 177
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE F+ K DV+ F +L E+ T
Sbjct: 178 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 91/214 (42%), Gaps = 17/214 (7%)
Query: 69 ATNNYDERKFIKQDSTYK----------LYKGFWQERLISVMKYNESYSDSACKFSINNI 118
+ NYD+ + + D T K +Y+G W++ ++V + +
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 60
Query: 119 VYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVA 178
++ H ++++L+G C P ++ E+ Y L D + + ++L L +A
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMA 117
Query: 179 MGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRF 238
I+ A+ YL + + +L + L E ++ K+ DF S + G+T+
Sbjct: 118 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAK 173
Query: 239 GAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE F+ K DV+ F +L E+ T
Sbjct: 174 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 91/214 (42%), Gaps = 17/214 (7%)
Query: 69 ATNNYDERKFIKQDSTYK----------LYKGFWQERLISVMKYNESYSDSACKFSINNI 118
+ NYD+ + + D T K +Y+G W++ ++V + +
Sbjct: 14 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 73
Query: 119 VYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVA 178
++ H ++++L+G C P ++ E+ Y L D + + ++L L +A
Sbjct: 74 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMA 130
Query: 179 MGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRF 238
I+ A+ YL + + +L + L E ++ K+ DF S + G+T+
Sbjct: 131 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAK 186
Query: 239 GAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE F+ K DV+ F +L E+ T
Sbjct: 187 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 90/211 (42%), Gaps = 17/211 (8%)
Query: 72 NYDERKFIKQDSTYK----------LYKGFWQERLISVMKYNESYSDSACKFSINNIVYA 121
NYD+ + + D T K +Y+G W++ ++V + +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
++ H ++++L+G C P ++ E+ Y L D + + ++L L +A I
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQI 120
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
+ A+ YL + + +L + L E ++ K+ DF S + G+T+
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPI 176
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE F+ K DV+ F +L E+ T
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 91/214 (42%), Gaps = 17/214 (7%)
Query: 69 ATNNYDERKFIKQDSTYK----------LYKGFWQERLISVMKYNESYSDSACKFSINNI 118
+ NYD+ + + D T K +Y+G W++ ++V + +
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 60
Query: 119 VYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVA 178
++ H ++++L+G C P ++ E+ Y L D + + ++L L +A
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMA 117
Query: 179 MGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRF 238
I+ A+ YL + + +L + L E ++ K+ DF S + G+T+
Sbjct: 118 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAK 173
Query: 239 GAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE F+ K DV+ F +L E+ T
Sbjct: 174 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 90/211 (42%), Gaps = 17/211 (8%)
Query: 72 NYDERKFIKQDSTYK----------LYKGFWQERLISVMKYNESYSDSACKFSINNIVYA 121
NYD+ + + D T K +Y+G W++ ++V + +
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
++ H ++++L+G C P ++ E+ Y L D + + ++L L +A I
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQI 122
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
+ A+ YL + + +L + L E ++ K+ DF S + G+T+
Sbjct: 123 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPI 178
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE F+ K DV+ F +L E+ T
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 90/211 (42%), Gaps = 17/211 (8%)
Query: 72 NYDERKFIKQDSTYK----------LYKGFWQERLISVMKYNESYSDSACKFSINNIVYA 121
NYD+ + + D T K +Y+G W++ ++V + +
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
++ H ++++L+G C P ++ E+ Y L D + + ++L L +A I
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQI 122
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
+ A+ YL + + +L + L E ++ K+ DF S + G+T+
Sbjct: 123 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPI 178
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE F+ K DV+ F +L E+ T
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 72 NYDERKFIKQDSTYK----------LYKGFWQERLISVMKYNESYSDSACKFSINNIVYA 121
NYD+ + + D T K +Y+G W++ ++V + +
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 64
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
++ H ++++L+G C P ++ E+ Y L D + + ++L L +A I
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQI 121
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
+ A+ YL + + +L + L E ++ K+ DF S + G+T
Sbjct: 122 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPI 177
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE F+ K DV+ F +L E+ T
Sbjct: 178 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 90/211 (42%), Gaps = 17/211 (8%)
Query: 72 NYDERKFIKQDSTYK----------LYKGFWQERLISVMKYNESYSDSACKFSINNIVYA 121
NYD+ + + D T K +Y+G W++ ++V + +
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 67
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
++ H ++++L+G C P ++ E+ Y L D + + ++L L +A I
Sbjct: 68 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQI 124
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
+ A+ YL + + +L + L E ++ K+ DF S + G+T+
Sbjct: 125 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPI 180
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE F+ K DV+ F +L E+ T
Sbjct: 181 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 93/217 (42%), Gaps = 17/217 (7%)
Query: 66 LEIATNNYDERKFIKQDSTYK----------LYKGFWQERLISVMKYNESYSDSACKFSI 115
++ ++ NYD+ + + D T K +Y+G W++ ++V + +
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 62
Query: 116 NNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRL 175
++ H ++++L+G C P ++ E+ Y L D + + ++L L
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---L 119
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
+A I+ A+ YL + + +L + L E ++ K+ DF S + G+T
Sbjct: 120 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHA 175
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE F+ K DV+ F +L E+ T
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 76/188 (40%), Gaps = 11/188 (5%)
Query: 93 QERLISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYT 152
Q++++ +K + SD+A K + H+HI+K G C+E I+VFEY ++
Sbjct: 41 QDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHG 100
Query: 153 TLR--------DRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISL 204
L D + A L L +A IA + YL + V +L +
Sbjct: 101 DLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATR 157
Query: 205 CILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFS 264
L E + K+ DF S + + + + + PE F + DV++
Sbjct: 158 NCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLG 217
Query: 265 TVLLELLT 272
VL E+ T
Sbjct: 218 VVLWEIFT 225
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 90/211 (42%), Gaps = 17/211 (8%)
Query: 72 NYDERKFIKQDSTYK----------LYKGFWQERLISVMKYNESYSDSACKFSINNIVYA 121
NYD+ + + D T K +Y+G W++ ++V + +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
++ H ++++L+G C P ++ E+ Y L D + + ++L L +A I
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQI 120
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
+ A+ YL + + +L + L E ++ K+ DF S + G+T+
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPI 176
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE F+ K DV+ F +L E+ T
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
Q+ H+ +++L + PI I+ EY E +L D + P L + L +A IA
Sbjct: 60 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 115
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWT 242
+A++ R + NL + IL ++ K+ DF + I + E ++F
Sbjct: 116 EGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-K 171
Query: 243 YSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L E++T
Sbjct: 172 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 201
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 77/187 (41%), Gaps = 22/187 (11%)
Query: 124 MDHKHILKLIGCCLETPIP--ILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ H +I+K G C L+ EY Y +LRD + Q H E + L+ I
Sbjct: 69 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 124
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEG-ETHIITRSRFGA 240
+ YL + + NL + IL EN K+ DF + +P+ E + +
Sbjct: 125 CKGMEYLGT---KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESP 181
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-----GQSTRDLLRTHGS-------VRH 288
+ APE F+ DV++F VL EL T + +R G+ V H
Sbjct: 182 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 241
Query: 289 LIEYLKN 295
LIE LKN
Sbjct: 242 LIELLKN 248
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 97/248 (39%), Gaps = 22/248 (8%)
Query: 53 GKYNPYRIFSAKELEIATNNYDERKFIKQDSTYKLYKGFWQ-------ERLISVMKYNES 105
G ++ ++ E E+A + + Q S +Y+G + E +++ NE+
Sbjct: 1 GSFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA 60
Query: 106 YSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRD-----RIFG 160
S +N + + H+++L+G + +++ E L+ R
Sbjct: 61 ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEM 120
Query: 161 APQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFS 220
P P L +++A IA +AYL+ V +L + + E+ K+ DF
Sbjct: 121 ENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFG 177
Query: 221 ESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-------G 273
+ I E + + +PE + GVF DV++F VL E+ T G
Sbjct: 178 MTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 237
Query: 274 QSTRDLLR 281
S +LR
Sbjct: 238 LSNEQVLR 245
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
Q+ H+ +++L + PI I+ EY E +L D + P L + L +A IA
Sbjct: 65 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 120
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWT 242
+A++ R + +L + IL ++ K+ DF + I + E ++F
Sbjct: 121 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-K 176
Query: 243 YSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L E++T
Sbjct: 177 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 90/228 (39%), Gaps = 15/228 (6%)
Query: 57 PYRIFSAKELEIATNNYDERKFIKQDSTYKLYKGFWQ-------ERLISVMKYNESYSDS 109
P +F E E++ + + Q S +Y+G + E ++V NES S
Sbjct: 3 PSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 62
Query: 110 ACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRD-----RIFGAPQP 164
+N H+++L+G + ++V E + L+ R P
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 165 HFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESIS 224
P L+ +++A IA +AYL+ + V +L + + + K+ DF +
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 225 IPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
I E + + APE + GVF D+++F VL E+ +
Sbjct: 180 IXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
Q+ H+ +++L + PI I+ EY E +L D + P L + L +A IA
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 119
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWT 242
+A++ R + +L + IL ++ K+ DF + I + E ++F
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-K 175
Query: 243 YSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L E++T
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
Q+ H+ +++L + PI I+ EY E +L D + P L + L +A IA
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 119
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWT 242
+A++ R + +L + IL ++ K+ DF + I + E ++F
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPI-K 175
Query: 243 YSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L E++T
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
Q+ H+ +++L + PI I+ EY E +L D + P L + L +A IA
Sbjct: 66 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 121
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWT 242
+A++ R + +L + IL ++ K+ DF + I + E ++F
Sbjct: 122 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-K 177
Query: 243 YSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L E++T
Sbjct: 178 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 207
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 22/241 (9%)
Query: 60 IFSAKELEIATNNYDERKFIKQDSTYKLYKGFWQ-------ERLISVMKYNESYSDSACK 112
++ E E+A + + Q S +Y+G + E +++ NE+ S
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 63
Query: 113 FSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRD-----RIFGAPQPHFE 167
+N + + H+++L+G + +++ E L+ R A P
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 168 PLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPE 227
P L +++A IA +AYL+ V +L + + E+ K+ DF + I E
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 180
Query: 228 GETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-------GQSTRDLL 280
+ + + +PE + GVF DV++F VL E+ T G S +L
Sbjct: 181 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 240
Query: 281 R 281
R
Sbjct: 241 R 241
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
Q+ H+ +++L + PI I+ EY E +L D + P L + L +A IA
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 119
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWT 242
+A++ R + +L + IL ++ K+ DF + I + E ++F
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-K 175
Query: 243 YSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L E++T
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 15/191 (7%)
Query: 93 QERLISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYT 152
Q++++ +K + S+SA + + H+HI++ G C E ++VFEY +
Sbjct: 40 QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 99
Query: 153 TLRDRIFGAPQPHFE-----------PLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNL 201
L +R + P + PL L L VA +A + YL G V +L
Sbjct: 100 DL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL-AGL--HFVHRDL 155
Query: 202 ISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVY 261
+ L + V K+ DF S I + + + + PE F + DV+
Sbjct: 156 ATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVW 215
Query: 262 TFSTVLLELLT 272
+F VL E+ T
Sbjct: 216 SFGVVLWEIFT 226
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
Q+ H+ +++L + PI I+ EY E +L D + P L + L +A IA
Sbjct: 72 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 127
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWT 242
+A++ R + +L + IL ++ K+ DF + I + E ++F
Sbjct: 128 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-K 183
Query: 243 YSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L E++T
Sbjct: 184 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 91/228 (39%), Gaps = 15/228 (6%)
Query: 57 PYRIFSAKELEIATNNYDERKFIKQDSTYKLYKGFWQ-------ERLISVMKYNESYSDS 109
P ++ E E++ + + Q S +Y+G + E ++V NES S
Sbjct: 4 PSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 63
Query: 110 ACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRD-----RIFGAPQP 164
+N H+++L+G + ++V E + L+ R P
Sbjct: 64 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 123
Query: 165 HFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESIS 224
P L+ +++A IA +AYL+ + V NL + + + K+ DF +
Sbjct: 124 GRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRD 180
Query: 225 IPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
I E + + + APE + GVF D+++F VL E+ +
Sbjct: 181 IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 15/191 (7%)
Query: 93 QERLISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYT 152
Q++++ +K + S+SA + + H+HI++ G C E ++VFEY +
Sbjct: 46 QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 105
Query: 153 TLRDRIFGAPQPHFE-----------PLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNL 201
L +R + P + PL L L VA +A + YL G V +L
Sbjct: 106 DL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL-AGL--HFVHRDL 161
Query: 202 ISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVY 261
+ L + V K+ DF S I + + + + PE F + DV+
Sbjct: 162 ATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVW 221
Query: 262 TFSTVLLELLT 272
+F VL E+ T
Sbjct: 222 SFGVVLWEIFT 232
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 22/241 (9%)
Query: 60 IFSAKELEIATNNYDERKFIKQDSTYKLYKGFWQ-------ERLISVMKYNESYSDSACK 112
++ E E+A + + Q S +Y+G + E +++ NE+ S
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 113 FSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRD-----RIFGAPQPHFE 167
+N + + H+++L+G + +++ E L+ R A P
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 168 PLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPE 227
P L +++A IA +AYL+ V +L + + E+ K+ DF + I E
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 228 GETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-------GQSTRDLL 280
+ + + +PE + GVF DV++F VL E+ T G S +L
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 250
Query: 281 R 281
R
Sbjct: 251 R 251
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
Q+ H+ +++L + PI I+ EY E +L D + P L + L +A IA
Sbjct: 70 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 125
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWT 242
+A++ R + +L + IL ++ K+ DF + I + E ++F
Sbjct: 126 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-K 181
Query: 243 YSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L E++T
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 91/228 (39%), Gaps = 15/228 (6%)
Query: 57 PYRIFSAKELEIATNNYDERKFIKQDSTYKLYKGFWQ-------ERLISVMKYNESYSDS 109
P ++ E E++ + + Q S +Y+G + E ++V NES S
Sbjct: 3 PSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 62
Query: 110 ACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRD-----RIFGAPQP 164
+N H+++L+G + ++V E + L+ R P
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 165 HFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESIS 224
P L+ +++A IA +AYL+ + V NL + + + K+ DF +
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 225 IPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
I E + + + APE + GVF D+++F VL E+ +
Sbjct: 180 IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 80/195 (41%), Gaps = 22/195 (11%)
Query: 97 ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLR- 155
++V E+ S S + ++ Q++H H++KL G C + +L+ EY +Y +LR
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 156 ----DRIFGA--------------PQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIV 197
R G P L + + A I+ + YL +V
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLV 172
Query: 198 FGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEK 257
+L + IL E K+ DF S + E ++++ + A E ++ +
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 258 LDVYTFSTVLLELLT 272
DV++F +L E++T
Sbjct: 233 SDVWSFGVLLWEIVT 247
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
Q+ H+ +++L + PI I+ EY E +L D + P L + L +A IA
Sbjct: 73 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 128
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWT 242
+A++ R + +L + IL ++ K+ DF + I + E ++F
Sbjct: 129 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-K 184
Query: 243 YSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L E++T
Sbjct: 185 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 81/187 (43%), Gaps = 7/187 (3%)
Query: 86 KLYKGFWQERLISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILV 145
++Y G W++ ++V + + ++ H ++++L+G C P +V
Sbjct: 47 EVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIV 106
Query: 146 FEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLC 205
EY Y L D + + ++L L +A I+ A+ YL + + +L +
Sbjct: 107 TEYMPYGNLLDYLRECNREEVTAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 160
Query: 206 ILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFST 265
L E +V K+ DF S + G+T+ ++APE F+ K DV+ F
Sbjct: 161 CLVGENHVVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGV 219
Query: 266 VLLELLT 272
+L E+ T
Sbjct: 220 LLWEIAT 226
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
Q+ H+ +++L + PI I+ EY E +L D + P L + L +A IA
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 119
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWT 242
+A++ R + +L + IL ++ K+ DF + I + E ++F
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-K 175
Query: 243 YSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L E++T
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
Q+ H+ +++L + PI I+ EY E +L D + P L + L +A IA
Sbjct: 70 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 125
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWT 242
+A++ R + +L + IL ++ K+ DF + I + E ++F
Sbjct: 126 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-K 181
Query: 243 YSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L E++T
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 21/194 (10%)
Query: 93 QERLISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYT 152
Q++++ +K + S+SA + + H+HI++ G C E ++VFEY +
Sbjct: 69 QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 128
Query: 153 TLRDRIFGAPQPHFE-----------PLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNL 201
L +R + P + PL L L VA +A + YL G V +L
Sbjct: 129 DL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL-AGL--HFVHRDL 184
Query: 202 ISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPE---YKRGGVFNEKL 258
+ L + V K+ DF S I + + + + PE Y++ F +
Sbjct: 185 ATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRK---FTTES 241
Query: 259 DVYTFSTVLLELLT 272
DV++F VL E+ T
Sbjct: 242 DVWSFGVVLWEIFT 255
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 14/158 (8%)
Query: 126 HKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHF-----------EPLLLKHR 174
HK+I+ L+G C + ++ EY LR+ + P E L K
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 175 LKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIIT 234
+ A +A + YL + + +L + +L E+NV K+ DF + I + + T
Sbjct: 153 VSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 235 RSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ + APE ++ + DV++F +L E+ T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
Q+ H+ +++L + PI I+ EY E +L D + P L + L +A IA
Sbjct: 59 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 114
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWT 242
+A++ R + +L + IL ++ K+ DF + I + E ++F
Sbjct: 115 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-K 170
Query: 243 YSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L E++T
Sbjct: 171 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 200
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 98/248 (39%), Gaps = 22/248 (8%)
Query: 53 GKYNPYRIFSAKELEIATNNYDERKFIKQDSTYKLYKGFWQ-------ERLISVMKYNES 105
G ++ ++ E E+A + + Q S +Y+G + E +++ NE+
Sbjct: 1 GSFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA 60
Query: 106 YSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRD-----RIFG 160
S +N + + H+++L+G + +++ E L+ R
Sbjct: 61 ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEM 120
Query: 161 APQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFS 220
P P L +++A IA +AYL+ V +L + + E+ K+ DF
Sbjct: 121 ENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFG 177
Query: 221 ESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-------G 273
+ I E + + + +PE + GVF DV++F VL E+ T G
Sbjct: 178 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 237
Query: 274 QSTRDLLR 281
S +LR
Sbjct: 238 LSNEQVLR 245
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
Q+ H+ +++L + PI I+ EY E +L D + P L + L +A IA
Sbjct: 69 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 124
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWT 242
+A++ R + +L + IL ++ K+ DF + I + E ++F
Sbjct: 125 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-K 180
Query: 243 YSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L E++T
Sbjct: 181 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 210
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 91/228 (39%), Gaps = 15/228 (6%)
Query: 57 PYRIFSAKELEIATNNYDERKFIKQDSTYKLYKGFWQ-------ERLISVMKYNESYSDS 109
P +F E E++ + + Q S +Y+G + E ++V NES S
Sbjct: 3 PSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 62
Query: 110 ACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRD-----RIFGAPQP 164
+N H+++L+G + ++V E + L+ R P
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 165 HFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESIS 224
P L+ +++A IA +AYL+ + V +L + + + K+ DF +
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 225 IPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
I E + + + APE + GVF D+++F VL E+ +
Sbjct: 180 IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 14/158 (8%)
Query: 126 HKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHF-----------EPLLLKHR 174
HK+I+ L+G C + ++ EY LR+ + P E L K
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 175 LKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIIT 234
+ A +A + YL + + +L + +L E+NV K+ DF + I + + T
Sbjct: 142 VSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 235 RSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ + APE ++ + DV++F +L E+ T
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 14/158 (8%)
Query: 126 HKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHF-----------EPLLLKHR 174
HK+I+ L+G C + ++ EY LR+ + P E L K
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 175 LKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIIT 234
+ A +A + YL + + +L + +L E+NV K+ DF + I + + T
Sbjct: 146 VSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 235 RSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ + APE ++ + DV++F +L E+ T
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
Q+ H+ +++L + PI I+ EY E +L D + P L + L +A IA
Sbjct: 74 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 129
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWT 242
+A++ R + +L + IL ++ K+ DF + I + E ++F
Sbjct: 130 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-K 185
Query: 243 YSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L E++T
Sbjct: 186 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 215
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 14/158 (8%)
Query: 126 HKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHF-----------EPLLLKHR 174
HK+I+ L+G C + ++ EY LR+ + P E L K
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 175 LKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIIT 234
+ A +A + YL + + +L + +L E+NV K+ DF + I + + T
Sbjct: 138 VSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 235 RSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ + APE ++ + DV++F +L E+ T
Sbjct: 195 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 14/158 (8%)
Query: 126 HKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHF-----------EPLLLKHR 174
HK+I+ L+G C + ++ EY LR+ + P E L K
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 175 LKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIIT 234
+ A +A + YL + + +L + +L E+NV K+ DF + I + + T
Sbjct: 145 VSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 235 RSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ + APE ++ + DV++F +L E+ T
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 14/158 (8%)
Query: 126 HKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHF-----------EPLLLKHR 174
HK+I+ L+G C + ++ EY LR+ + P E L K
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 175 LKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIIT 234
+ A +A + YL + + +L + +L E+NV K+ DF + I + + T
Sbjct: 153 VSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 235 RSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ + APE ++ + DV++F +L E+ T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 22/187 (11%)
Query: 124 MDHKHILKLIGCCLETPIP--ILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ H +I+K G C L+ EY Y +LRD + Q H E + L+ I
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QAHAERIDHIKLLQYTSQI 126
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEG-ETHIITRSRFGA 240
+ YL + + +L + IL EN K+ DF + +P+ E +
Sbjct: 127 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-----GQSTRDLLRTHGS-------VRH 288
+ APE F+ DV++F VL EL T + +R G+ V H
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 243
Query: 289 LIEYLKN 295
LIE LKN
Sbjct: 244 LIELLKN 250
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 14/158 (8%)
Query: 126 HKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHF-----------EPLLLKHR 174
HK+I+ L+G C + ++ EY LR+ + P E L K
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 175 LKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIIT 234
+ A +A + YL + + +L + +L E+NV K+ DF + I + + T
Sbjct: 153 VSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 235 RSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ + APE ++ + DV++F +L E+ T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 19/181 (10%)
Query: 108 DSACKFSINNIVYAAQM-----DHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAP 162
D A + ++++V +M HK+I+ L+G C + ++ EY LR+ +
Sbjct: 64 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 123
Query: 163 QPHF-----------EPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEE 211
P E + K + +A + YL + + +L + +L E
Sbjct: 124 PPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLTARNVLVTEN 180
Query: 212 NVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
NV K+ DF + I + + T + + APE V+ + DV++F ++ E+
Sbjct: 181 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 240
Query: 272 T 272
T
Sbjct: 241 T 241
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 90/228 (39%), Gaps = 15/228 (6%)
Query: 57 PYRIFSAKELEIATNNYDERKFIKQDSTYKLYKGFWQ-------ERLISVMKYNESYSDS 109
P ++ E E++ + + Q S +Y+G + E ++V NES S
Sbjct: 3 PSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 62
Query: 110 ACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRD-----RIFGAPQP 164
+N H+++L+G + ++V E + L+ R P
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 165 HFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESIS 224
P L+ +++A IA +AYL+ + V +L + + + K+ DF +
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 225 IPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
I E + + APE + GVF D+++F VL E+ +
Sbjct: 180 IXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRLKVAMGI 181
++ H+ +++L E PI I V EY +L D + G + P L+ ++A G+
Sbjct: 59 KLRHEKLVQLYAVVSEEPIXI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 117
Query: 182 AHA--LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFG 239
A+ + Y+H +L + IL E V K+ DF + I + E ++F
Sbjct: 118 AYVERMNYVHR---------DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP 168
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L EL T
Sbjct: 169 I-KWTAPEAALYGRFTIKSDVWSFGILLTELTT 200
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 95/241 (39%), Gaps = 22/241 (9%)
Query: 60 IFSAKELEIATNNYDERKFIKQDSTYKLYKGFWQ-------ERLISVMKYNESYSDSACK 112
+F E E+A + + Q S +Y+G + E +++ NE+ S
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 113 FSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRD-----RIFGAPQPHFE 167
+N + + H+++L+G + +++ E L+ R P
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 168 PLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPE 227
P L +++A IA +AYL+ V +L + + E+ K+ DF + I E
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 181
Query: 228 GETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-------GQSTRDLL 280
+ + + +PE + GVF DV++F VL E+ T G S +L
Sbjct: 182 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 241
Query: 281 R 281
R
Sbjct: 242 R 242
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 79/195 (40%), Gaps = 22/195 (11%)
Query: 97 ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLR- 155
++V E+ S S + ++ Q++H H++KL G C + +L+ EY +Y +LR
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 156 ----DRIFGA--------------PQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIV 197
R G P L + + A I+ + YL +V
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMSLV 172
Query: 198 FGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEK 257
+L + IL E K+ DF S + E ++ + + A E ++ +
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 258 LDVYTFSTVLLELLT 272
DV++F +L E++T
Sbjct: 233 SDVWSFGVLLWEIVT 247
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 79/195 (40%), Gaps = 22/195 (11%)
Query: 97 ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLR- 155
++V E+ S S + ++ Q++H H++KL G C + +L+ EY +Y +LR
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 156 ----DRIFGA--------------PQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIV 197
R G P L + + A I+ + YL +V
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLV 172
Query: 198 FGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEK 257
+L + IL E K+ DF S + E ++ + + A E ++ +
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 258 LDVYTFSTVLLELLT 272
DV++F +L E++T
Sbjct: 233 SDVWSFGVLLWEIVT 247
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
++ H +++L G CLE LVFE+ E+ L D + + + L + + +
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVC 113
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWT 242
+AYL ++ +L + L E V K+ DF + + + + T ++F
Sbjct: 114 EGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-K 169
Query: 243 YSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+++PE ++ K DV++F ++ E+ +
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 14/158 (8%)
Query: 126 HKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHF-----------EPLLLKHR 174
HK+I+ L+G C + ++ EY LR+ + P E L K
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 175 LKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIIT 234
+ A +A + YL + + +L + +L E+NV K+ DF + I + + T
Sbjct: 194 VSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 235 RSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ + APE ++ + DV++F +L E+ T
Sbjct: 251 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 19/181 (10%)
Query: 108 DSACKFSINNIVYAAQM-----DHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAP 162
D A + ++++V +M HK+I+ L+G C + ++ EY LR+ +
Sbjct: 69 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 128
Query: 163 QPHF-----------EPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEE 211
P E + K + +A + YL + + +L + +L E
Sbjct: 129 PPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTEN 185
Query: 212 NVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
NV K+ DF + I + + T + + APE V+ + DV++F ++ E+
Sbjct: 186 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 245
Query: 272 T 272
T
Sbjct: 246 T 246
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 19/181 (10%)
Query: 108 DSACKFSINNIVYAAQM-----DHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAP 162
D A + ++++V +M HK+I+ L+G C + ++ EY LR+ +
Sbjct: 77 DDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 136
Query: 163 QPHF-----------EPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEE 211
P E + K + +A + YL + + +L + +L E
Sbjct: 137 PPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTEN 193
Query: 212 NVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
NV K+ DF + I + + T + + APE V+ + DV++F ++ E+
Sbjct: 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 272 T 272
T
Sbjct: 254 T 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 19/181 (10%)
Query: 108 DSACKFSINNIVYAAQM-----DHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAP 162
D A + ++++V +M HK+I+ L+G C + ++ EY LR+ +
Sbjct: 123 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 182
Query: 163 QPHF-----------EPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEE 211
P E + K + +A + YL + + +L + +L E
Sbjct: 183 PPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTEN 239
Query: 212 NVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
NV K+ DF + I + + T + + APE V+ + DV++F ++ E+
Sbjct: 240 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 299
Query: 272 T 272
T
Sbjct: 300 T 300
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 19/181 (10%)
Query: 108 DSACKFSINNIVYAAQM-----DHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAP 162
D A + ++++V +M HK+I+ L+G C + ++ EY LR+ +
Sbjct: 66 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 125
Query: 163 QPHF-----------EPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEE 211
P E + K + +A + YL + + +L + +L E
Sbjct: 126 PPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTEN 182
Query: 212 NVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
NV K+ DF + I + + T + + APE V+ + DV++F ++ E+
Sbjct: 183 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 242
Query: 272 T 272
T
Sbjct: 243 T 243
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 19/181 (10%)
Query: 108 DSACKFSINNIVYAAQM-----DHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAP 162
D A + ++++V +M HK+I+ L+G C + ++ EY LR+ +
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 136
Query: 163 QPHF-----------EPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEE 211
P E + K + +A + YL + + +L + +L E
Sbjct: 137 PPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTEN 193
Query: 212 NVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
NV K+ DF + I + + T + + APE V+ + DV++F ++ E+
Sbjct: 194 NVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 272 T 272
T
Sbjct: 254 T 254
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 22/187 (11%)
Query: 124 MDHKHILKLIGCCLETPIP--ILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ H +I+K G C L+ EY Y +LRD + Q H E + L+ I
Sbjct: 73 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 128
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEG-ETHIITRSRFGA 240
+ YL + + +L + IL EN K+ DF + +P+ E +
Sbjct: 129 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 185
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-----GQSTRDLLRTHGS-------VRH 288
+ APE F+ DV++F VL EL T + +R G+ V H
Sbjct: 186 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 245
Query: 289 LIEYLKN 295
LIE LKN
Sbjct: 246 LIELLKN 252
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 22/187 (11%)
Query: 124 MDHKHILKLIGCCLETPIP--ILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ H +I+K G C L+ EY Y +LRD + Q H E + L+ I
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 126
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEG-ETHIITRSRFGA 240
+ YL + + +L + IL EN K+ DF + +P+ E +
Sbjct: 127 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-----GQSTRDLLRTHGS-------VRH 288
+ APE F+ DV++F VL EL T + +R G+ V H
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 243
Query: 289 LIEYLKN 295
LIE LKN
Sbjct: 244 LIELLKN 250
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 22/187 (11%)
Query: 124 MDHKHILKLIGCCLETPIP--ILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ H +I+K G C L+ EY Y +LRD + Q H E + L+ I
Sbjct: 74 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 129
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEG-ETHIITRSRFGA 240
+ YL + + +L + IL EN K+ DF + +P+ E +
Sbjct: 130 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 186
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-----GQSTRDLLRTHGS-------VRH 288
+ APE F+ DV++F VL EL T + +R G+ V H
Sbjct: 187 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 246
Query: 289 LIEYLKN 295
LIE LKN
Sbjct: 247 LIELLKN 253
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 74/181 (40%), Gaps = 19/181 (10%)
Query: 108 DSACKFSINNIVYAAQM-----DHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAP 162
D A + ++++V +M HK+I+ L+G C + ++ EY LR+ +
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 136
Query: 163 QPHF-----------EPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEE 211
P E + K + +A + YL + + +L + +L E
Sbjct: 137 PPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTEN 193
Query: 212 NVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
NV K+ DF + I + T + + APE V+ + DV++F ++ E+
Sbjct: 194 NVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 272 T 272
T
Sbjct: 254 T 254
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 22/187 (11%)
Query: 124 MDHKHILKLIGCCLETPIP--ILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ H +I+K G C L+ EY Y +LRD + Q H E + L+ I
Sbjct: 99 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 154
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEG-ETHIITRSRFGA 240
+ YL + + +L + IL EN K+ DF + +P+ E +
Sbjct: 155 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 211
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-----GQSTRDLLRTHGS-------VRH 288
+ APE F+ DV++F VL EL T + +R G+ V H
Sbjct: 212 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 271
Query: 289 LIEYLKN 295
LIE LKN
Sbjct: 272 LIELLKN 278
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 74/181 (40%), Gaps = 19/181 (10%)
Query: 108 DSACKFSINNIVYAAQM-----DHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAP 162
D A + ++++V +M HK+I+ L+G C + ++ EY LR+ +
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 136
Query: 163 QPHF-----------EPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEE 211
P E + K + +A + YL + + +L + +L E
Sbjct: 137 PPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTEN 193
Query: 212 NVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
NV K+ DF + I + T + + APE V+ + DV++F ++ E+
Sbjct: 194 NVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 272 T 272
T
Sbjct: 254 T 254
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 66/165 (40%), Gaps = 15/165 (9%)
Query: 118 IVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRI---FGAPQPHFEPLLLKHR 174
I A ++H++++K G E I L EY L DRI G P+P + H+
Sbjct: 56 ICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQ 113
Query: 175 LKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIIT 234
L + H + H R I NL L +E + K+ DF + +
Sbjct: 114 LMAGVVYLHGIGITH----RDIKPENL-----LLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 235 RSRFGAWTYSAPE-YKRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
G Y APE KR E +DV++ VL +L G+ D
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 22/187 (11%)
Query: 124 MDHKHILKLIGCCLETPIP--ILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ H +I+K G C L+ EY Y +LRD + Q H E + L+ I
Sbjct: 75 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 130
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEG-ETHIITRSRFGA 240
+ YL + + +L + IL EN K+ DF + +P+ E +
Sbjct: 131 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 187
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-----GQSTRDLLRTHGS-------VRH 288
+ APE F+ DV++F VL EL T + +R G+ V H
Sbjct: 188 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 247
Query: 289 LIEYLKN 295
LIE LKN
Sbjct: 248 LIELLKN 254
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 22/187 (11%)
Query: 124 MDHKHILKLIGCCLETPIP--ILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ H +I+K G C L+ EY Y +LRD + Q H E + L+ I
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 123
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEG-ETHIITRSRFGA 240
+ YL + + +L + IL EN K+ DF + +P+ E +
Sbjct: 124 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 180
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-----GQSTRDLLRTHGS-------VRH 288
+ APE F+ DV++F VL EL T + +R G+ V H
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240
Query: 289 LIEYLKN 295
LIE LKN
Sbjct: 241 LIELLKN 247
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 22/187 (11%)
Query: 124 MDHKHILKLIGCCLETPIP--ILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ H +I+K G C L+ EY Y +LRD + Q H E + L+ I
Sbjct: 66 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 121
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEG-ETHIITRSRFGA 240
+ YL + + +L + IL EN K+ DF + +P+ E +
Sbjct: 122 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 178
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-----GQSTRDLLRTHGS-------VRH 288
+ APE F+ DV++F VL EL T + +R G+ V H
Sbjct: 179 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 238
Query: 289 LIEYLKN 295
LIE LKN
Sbjct: 239 LIELLKN 245
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 81/187 (43%), Gaps = 7/187 (3%)
Query: 86 KLYKGFWQERLISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILV 145
++Y+G W++ ++V + + ++ H ++++L+G C P ++
Sbjct: 26 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 85
Query: 146 FEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLC 205
E+ Y L D + + ++L L +A I+ A+ YL + + +L +
Sbjct: 86 IEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 139
Query: 206 ILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFST 265
L E ++ K+ DF S + G+T ++APE F+ K DV+ F
Sbjct: 140 CLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 198
Query: 266 VLLELLT 272
+L E+ T
Sbjct: 199 LLWEIAT 205
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 66/158 (41%), Gaps = 14/158 (8%)
Query: 126 HKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHF-----------EPLLLKHR 174
HK+I+ L+G C + ++ EY LR+ + P E L K
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 175 LKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIIT 234
+ A +A + YL + + +L + +L E+NV K+ DF + I + T
Sbjct: 153 VSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKT 209
Query: 235 RSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ + APE ++ + DV++F +L E+ T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 89/225 (39%), Gaps = 15/225 (6%)
Query: 60 IFSAKELEIATNNYDERKFIKQDSTYKLYKGFWQ-------ERLISVMKYNESYSDSACK 112
+F E E++ + + Q S +Y+G + E ++V NES S
Sbjct: 3 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 62
Query: 113 FSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRD-----RIFGAPQPHFE 167
+N H+++L+G + ++V E + L+ R P
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 168 PLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPE 227
P L+ +++A IA +AYL+ + V +L + + + K+ DF + I E
Sbjct: 123 PPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 179
Query: 228 GETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ + APE + GVF D+++F VL E+ +
Sbjct: 180 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 22/187 (11%)
Query: 124 MDHKHILKLIGCCLETPIP--ILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ H +I+K G C L+ EY Y +LRD + Q H E + L+ I
Sbjct: 67 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 122
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEG-ETHIITRSRFGA 240
+ YL + + +L + IL EN K+ DF + +P+ E +
Sbjct: 123 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 179
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-----GQSTRDLLRTHGS-------VRH 288
+ APE F+ DV++F VL EL T + +R G+ V H
Sbjct: 180 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 239
Query: 289 LIEYLKN 295
LIE LKN
Sbjct: 240 LIELLKN 246
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 22/187 (11%)
Query: 124 MDHKHILKLIGCCLETPIP--ILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ H +I+K G C L+ EY Y +LRD + Q H E + L+ I
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 123
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEG-ETHIITRSRFGA 240
+ YL + + +L + IL EN K+ DF + +P+ E +
Sbjct: 124 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 180
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-----GQSTRDLLRTHGS-------VRH 288
+ APE F+ DV++F VL EL T + +R G+ V H
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240
Query: 289 LIEYLKN 295
LIE LKN
Sbjct: 241 LIELLKN 247
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 19/181 (10%)
Query: 108 DSACKFSINNIVYAAQM-----DHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAP 162
D A + ++++V +M HK+I+ L+G C + ++ EY LR+ +
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARR 136
Query: 163 QPHF-----------EPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEE 211
P E + K + +A + YL + + +L + +L E
Sbjct: 137 PPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTEN 193
Query: 212 NVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
NV K+ DF + I + + T + + APE V+ + DV++F ++ E+
Sbjct: 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 272 T 272
T
Sbjct: 254 T 254
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRLKVAMGI 181
++ H+ +++L E PI I V EY +L D + G + P L+ ++A G+
Sbjct: 235 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 293
Query: 182 AHA--LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFG 239
A+ + Y+H +L + IL E V K+ DF + I + E ++F
Sbjct: 294 AYVERMNYVHR---------DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 344
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L EL T
Sbjct: 345 I-KWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRLKVAMGI 181
++ H+ +++L E PI I V EY +L D + G + P L+ ++A G+
Sbjct: 235 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 293
Query: 182 AHA--LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFG 239
A+ + Y+H +L + IL E V K+ DF + I + E ++F
Sbjct: 294 AYVERMNYVHR---------DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 344
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L EL T
Sbjct: 345 I-KWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 22/187 (11%)
Query: 124 MDHKHILKLIGCCLETPIP--ILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ H +I+K G C L+ EY Y +LRD + Q H E + L+ I
Sbjct: 72 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 127
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEG-ETHIITRSRFGA 240
+ YL + + +L + IL EN K+ DF + +P+ E +
Sbjct: 128 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 184
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-----GQSTRDLLRTHGS-------VRH 288
+ APE F+ DV++F VL EL T + +R G+ V H
Sbjct: 185 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 244
Query: 289 LIEYLKN 295
LIE LKN
Sbjct: 245 LIELLKN 251
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 90/228 (39%), Gaps = 15/228 (6%)
Query: 57 PYRIFSAKELEIATNNYDERKFIKQDSTYKLYKGFWQ-------ERLISVMKYNESYSDS 109
P +F E E++ + + Q S +Y+G + E ++V NES S
Sbjct: 3 PSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 62
Query: 110 ACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRD-----RIFGAPQP 164
+N H+++L+G + ++V E + L+ R P
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 165 HFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESIS 224
P L+ +++A IA +AYL+ + V +L + + + K+ DF +
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 225 IPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
I E + + APE + GVF D+++F VL E+ +
Sbjct: 180 IYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 80/183 (43%), Gaps = 9/183 (4%)
Query: 90 GFWQERLISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYG 149
G+W + +K + S S F I ++ H +++L G CLE LVFE+
Sbjct: 46 GYWLNKDKVAIKTIKEGSMSEDDF-IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 104
Query: 150 EYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFN 209
E+ L D + + + L + + + +AYL ++ +L + L
Sbjct: 105 EHGCLSDYL----RTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVG 157
Query: 210 EENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLE 269
E V K+ DF + + + + T ++F +++PE ++ K DV++F ++ E
Sbjct: 158 ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKSDVWSFGVLMWE 216
Query: 270 LLT 272
+ +
Sbjct: 217 VFS 219
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRLKVAMGI 181
++ H+ +++L E PI I V EY +L D + G + P L+ ++A G+
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYI-VIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 182 AHA--LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFG 239
A+ + Y+H +L + IL E V K+ DF + I + E ++F
Sbjct: 128 AYVERMNYVHR---------DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP 178
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L EL T
Sbjct: 179 I-KWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 19/181 (10%)
Query: 108 DSACKFSINNIVYAAQM-----DHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAP 162
D A + ++++V +M HK+I+ L+G C + ++ EY LR+ +
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARR 136
Query: 163 QPHF-----------EPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEE 211
P E + K + +A + YL + + +L + +L E
Sbjct: 137 PPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTEN 193
Query: 212 NVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
NV K+ DF + I + + T + + APE V+ + DV++F ++ E+
Sbjct: 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 272 T 272
T
Sbjct: 254 T 254
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRLKVAMGI 181
++ H+ +++L E PI I V EY +L D + G + P L+ ++A G+
Sbjct: 235 KLRHEKLVQLYAVVSEEPIYI-VGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 293
Query: 182 AHA--LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFG 239
A+ + Y+H +L + IL E V K+ DF + I + E ++F
Sbjct: 294 AYVERMNYVHR---------DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 344
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L EL T
Sbjct: 345 I-KWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 22/187 (11%)
Query: 124 MDHKHILKLIGCCLETPIP--ILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ H +I+K G C L+ EY Y +LRD + Q H E + L+ I
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 141
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEG-ETHIITRSRFGA 240
+ YL + + +L + IL EN K+ DF + +P+ E +
Sbjct: 142 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 198
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-----GQSTRDLLRTHGS-------VRH 288
+ APE F+ DV++F VL EL T + +R G+ V H
Sbjct: 199 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 258
Query: 289 LIEYLKN 295
LIE LKN
Sbjct: 259 LIELLKN 265
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRLKVAMGI 181
++ H+ +++L E PI +V EY +L D + G + P L+ ++A G+
Sbjct: 66 KLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGM 124
Query: 182 AHA--LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFG 239
A+ + Y+H +L + IL E V K+ DF + I + E ++F
Sbjct: 125 AYVERMNYVHR---------DLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFP 175
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L EL T
Sbjct: 176 I-KWTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 19/164 (11%)
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ ++H +I+KL G + P P +V E+ L R+ P + L+ L +A+GI
Sbjct: 78 SNLNHPNIVKLYGL-MHNP-PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFN--EENV---AKLFDFSESISIPEGETHIITRS 236
Y+ P PIV +L S I +EN AK+ DFS S + H ++
Sbjct: 136 E----YMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS----QQSVHSVS-G 185
Query: 237 RFGAWTYSAPEY--KRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
G + + APE + EK D Y+F+ +L +LTG+ D
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 22/187 (11%)
Query: 124 MDHKHILKLIGCCLETPIP--ILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ H +I+K G C L+ EY Y +LRD + Q H E + L+ I
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 141
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEG-ETHIITRSRFGA 240
+ YL + + +L + IL EN K+ DF + +P+ E +
Sbjct: 142 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 198
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-----GQSTRDLLRTHGS-------VRH 288
+ APE F+ DV++F VL EL T + +R G+ V H
Sbjct: 199 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 258
Query: 289 LIEYLKN 295
LIE LKN
Sbjct: 259 LIELLKN 265
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
++ H +++L G CLE LVFE+ E+ L D + LL L V G
Sbjct: 56 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG-- 113
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWT 242
+AYL ++ +L + L E V K+ DF + + + + T ++F
Sbjct: 114 --MAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-K 167
Query: 243 YSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+++PE ++ K DV++F ++ E+ +
Sbjct: 168 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS 197
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
++ H +++L G CLE LVFE+ E+ L D + + + L + + +
Sbjct: 61 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVC 116
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWT 242
+AYL ++ +L + L E V K+ DF + + + + T ++F
Sbjct: 117 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-K 172
Query: 243 YSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+++PE ++ K DV++F ++ E+ +
Sbjct: 173 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS 202
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
++ H +++L G CLE LVFE+ E+ L D + + + L + + +
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVC 113
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWT 242
+AYL ++ +L + L E V K+ DF + + + + T ++F
Sbjct: 114 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-K 169
Query: 243 YSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+++PE ++ K DV++F ++ E+ +
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 77/187 (41%), Gaps = 19/187 (10%)
Query: 97 ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRD 156
+ VMK + + + + + ++H ++LK IG + + EY + TLR
Sbjct: 37 VMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRG 96
Query: 157 RIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKL 216
I + R+ A IA +AYLH I+ +L S L E +
Sbjct: 97 IIKSMDSQY----PWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVV 149
Query: 217 FDFS------ESISIPEGETHIITRSRFGAWT------YSAPEYKRGGVFNEKLDVYTFS 264
DF + + PEG + R +T + APE G ++EK+DV++F
Sbjct: 150 ADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFG 209
Query: 265 TVLLELL 271
VL E++
Sbjct: 210 IVLCEII 216
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 108/265 (40%), Gaps = 24/265 (9%)
Query: 38 RNGARVLKELI-ASSHGKY-NPYRIFSAKELEIATNNYDERKFIKQDSTYKLYKGFWQ-- 93
RN +R+ ++ AS + +Y + ++ E E+A + + Q S +Y+G +
Sbjct: 12 RNNSRLGNGVLYASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGV 71
Query: 94 -----ERLISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY 148
E +++ NE+ S +N + + H+++L+G + +++ E
Sbjct: 72 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 131
Query: 149 GEYTTLRD-----RIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLIS 203
L+ R P P L +++A IA +AYL+ V +L +
Sbjct: 132 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAA 188
Query: 204 LCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTF 263
+ E+ K+ DF + I E + + + +PE + GVF DV++F
Sbjct: 189 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 248
Query: 264 STVLLELLT-------GQSTRDLLR 281
VL E+ T G S +LR
Sbjct: 249 GVVLWEIATLAEQPYQGLSNEQVLR 273
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 108/271 (39%), Gaps = 22/271 (8%)
Query: 11 FAVRPQPQMGSILTKFKDRTDKRTLMVRNGARVLKEL--IASSHGKYNPYRIFSAKELEI 68
F +RPQ + L + VR+ + E A + + Y + S ++ EI
Sbjct: 328 FIIRPQKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEI 387
Query: 69 ATNNYDERKFIKQDSTYKLYKGFWQE-----RLISVMKYNESYSDSACKFSINNIVYAAQ 123
+ + I + +++G + +++ SDS + + + Q
Sbjct: 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQ 447
Query: 124 MDHKHILKLIGCCLETPIPILV--FEYGEYTT-LRDRIFGAPQPHFEPLLLKHRLKVAMG 180
DH HI+KLIG E P+ I++ GE + L+ R F L L + A
Sbjct: 448 FDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFS--------LDLASLILYAYQ 499
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
++ ALAYL + V ++ + +L + + KL DF S + + + ++ +
Sbjct: 500 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 556
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
+ APE F DV+ F + E+L
Sbjct: 557 -KWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRLKVAMGI 181
++ H+ +++L E PI +V EY +L D + G + P L+ ++A G+
Sbjct: 318 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 376
Query: 182 AHA--LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFG 239
A+ + Y+H +L + IL E V K+ DF + I + E ++F
Sbjct: 377 AYVERMNYVHR---------DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 427
Query: 240 -AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
WT APE G F K DV++F +L EL T
Sbjct: 428 IKWT--APEAALYGRFTIKSDVWSFGILLTELTT 459
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 81/187 (43%), Gaps = 7/187 (3%)
Query: 86 KLYKGFWQERLISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILV 145
++Y+G W++ ++V + + ++ H ++++L+G C P ++
Sbjct: 26 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 85
Query: 146 FEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLC 205
E+ Y L D + + ++L L +A I+ A+ YL + + +L +
Sbjct: 86 TEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 139
Query: 206 ILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFST 265
L E ++ K+ DF S + G+T ++APE F+ K DV+ F
Sbjct: 140 CLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 198
Query: 266 VLLELLT 272
+L E+ T
Sbjct: 199 LLWEIAT 205
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 75/181 (41%), Gaps = 19/181 (10%)
Query: 108 DSACKFSINNIVYAAQM-----DHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAP 162
D A + ++++V +M HK+I+ L+G C + ++ EY LR+ +
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 136
Query: 163 QPHF-----------EPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEE 211
P E + K + +A + YL + + +L + +L E
Sbjct: 137 PPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTEN 193
Query: 212 NVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
NV ++ DF + I + + T + + APE V+ + DV++F ++ E+
Sbjct: 194 NVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 272 T 272
T
Sbjct: 254 T 254
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 85/216 (39%), Gaps = 27/216 (12%)
Query: 97 ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY--GEYTTL 154
I M Y+ S+ + I + + ++ H + ++ GC L LV EY G + L
Sbjct: 45 IKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDL 104
Query: 155 RDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVG--FPRPIVFGNLISLCILFNEEN 212
+ H +PL V G LAYLH R + GN IL +E
Sbjct: 105 L-------EVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGN-----ILLSEPG 152
Query: 213 VAKLFDF-SESISIPEGETHIITRSRFGAWTYSAPEY---KRGGVFNEKLDVYTFSTVLL 268
+ KL DF S SI P G + APE G ++ K+DV++ +
Sbjct: 153 LVKLGDFGSASIMAP-------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 205
Query: 269 ELLTGQSTRDLLRTHGSVRHLIEYLKNYLQNNRFTE 304
EL + + ++ H+ + LQ+ ++E
Sbjct: 206 ELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSE 241
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRLKVAMGI 181
++ H+ +++L E PI I V EY +L D + G + P L+ ++A G+
Sbjct: 66 KLRHEKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGM 124
Query: 182 AHA--LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFG 239
A+ + Y+H +L + IL E V K+ DF + I + E ++F
Sbjct: 125 AYVERMNYVHR---------DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 175
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L EL T
Sbjct: 176 I-KWTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRLKVAMGI 181
++ H+ +++L E PI I V EY +L D + G + P L+ ++A G+
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYI-VIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 182 AHA--LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFG 239
A+ + Y+H +L + IL E V K+ DF + I + E ++F
Sbjct: 128 AYVERMNYVHR---------DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L EL T
Sbjct: 179 I-KWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 108/271 (39%), Gaps = 22/271 (8%)
Query: 11 FAVRPQPQMGSILTKFKDRTDKRTLMVRNGARVLKEL--IASSHGKYNPYRIFSAKELEI 68
F +RPQ + L + VR+ + E A + + Y + S ++ EI
Sbjct: 328 FIIRPQKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEI 387
Query: 69 ATNNYDERKFIKQDSTYKLYKGFWQE-----RLISVMKYNESYSDSACKFSINNIVYAAQ 123
+ + I + +++G + +++ SDS + + + Q
Sbjct: 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQ 447
Query: 124 MDHKHILKLIGCCLETPIPILV--FEYGEYTT-LRDRIFGAPQPHFEPLLLKHRLKVAMG 180
DH HI+KLIG E P+ I++ GE + L+ R F L L + A
Sbjct: 448 FDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFS--------LDLASLILYAYQ 499
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
++ ALAYL + V ++ + +L + + KL DF S + + + ++ +
Sbjct: 500 LSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI 556
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
+ APE F DV+ F + E+L
Sbjct: 557 -KWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRLKVAMGI 181
++ H+ +++L E PI I V EY +L D + G + P L+ ++A G+
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 182 AHA--LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFG 239
A+ + Y+H +L + IL E V K+ DF + I + E ++F
Sbjct: 128 AYVERMNYVHR---------DLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L EL T
Sbjct: 179 I-KWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 22/187 (11%)
Query: 124 MDHKHILKLIGCCLETPIP--ILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ H +I+K G C L+ EY Y +LRD + Q H E + L+ I
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 123
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEG-ETHIITRSRFGA 240
+ YL + + +L + IL EN K+ DF + +P+ E +
Sbjct: 124 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESP 180
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-----GQSTRDLLRTHGS-------VRH 288
+ APE F+ DV++F VL EL T + +R G+ V H
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240
Query: 289 LIEYLKN 295
LIE LKN
Sbjct: 241 LIELLKN 247
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 85/216 (39%), Gaps = 27/216 (12%)
Query: 97 ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY--GEYTTL 154
I M Y+ S+ + I + + ++ H + ++ GC L LV EY G + L
Sbjct: 84 IKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDL 143
Query: 155 RDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVG--FPRPIVFGNLISLCILFNEEN 212
+ H +PL V G LAYLH R + GN IL +E
Sbjct: 144 LEV-------HKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGN-----ILLSEPG 191
Query: 213 VAKLFDF-SESISIPEGETHIITRSRFGAWTYSAPEY---KRGGVFNEKLDVYTFSTVLL 268
+ KL DF S SI P G + APE G ++ K+DV++ +
Sbjct: 192 LVKLGDFGSASIMAP-------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 244
Query: 269 ELLTGQSTRDLLRTHGSVRHLIEYLKNYLQNNRFTE 304
EL + + ++ H+ + LQ+ ++E
Sbjct: 245 ELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSE 280
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 19/164 (11%)
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ ++H +I+KL G + P P +V E+ L R+ P + L+ L +A+GI
Sbjct: 78 SNLNHPNIVKLYGL-MHNP-PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFN--EENV---AKLFDFSESISIPEGETHIITRS 236
Y+ P PIV +L S I +EN AK+ DF S + H ++
Sbjct: 136 E----YMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS----QQSVHSVS-G 185
Query: 237 RFGAWTYSAPEY--KRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
G + + APE + EK D Y+F+ +L +LTG+ D
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 81/187 (43%), Gaps = 7/187 (3%)
Query: 86 KLYKGFWQERLISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILV 145
++Y+G W++ ++V + + ++ H ++++L+G C P ++
Sbjct: 26 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 85
Query: 146 FEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLC 205
E+ Y L D + + ++L L +A I+ A+ YL + + +L +
Sbjct: 86 TEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 139
Query: 206 ILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFST 265
L E ++ K+ DF S + G+T ++APE F+ K DV+ F
Sbjct: 140 CLVGENHLVKVADFGLS-RLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 198
Query: 266 VLLELLT 272
+L E+ T
Sbjct: 199 LLWEIAT 205
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 95/241 (39%), Gaps = 22/241 (9%)
Query: 60 IFSAKELEIATNNYDERKFIKQDSTYKLYKGFWQ-------ERLISVMKYNESYSDSACK 112
++ E E+A + + Q S +Y+G + E +++ NE+ S
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 113 FSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRD-----RIFGAPQPHFE 167
+N + + H+++L+G + +++ E L+ R P
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 168 PLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPE 227
P L +++A IA +AYL+ V +L + + E+ K+ DF + I E
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 228 GETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-------GQSTRDLL 280
+ + + +PE + GVF DV++F VL E+ T G S +L
Sbjct: 184 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 243
Query: 281 R 281
R
Sbjct: 244 R 244
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRLKVAMGI 181
++ H+ +++L E PI I V EY +L D + G + P L+ ++A G+
Sbjct: 62 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 120
Query: 182 AHA--LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFG 239
A+ + Y+H +L + IL E V K+ DF + I + E ++F
Sbjct: 121 AYVERMNYVHR---------DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 171
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L EL T
Sbjct: 172 I-KWTAPEAALYGRFTIKSDVWSFGILLTELTT 203
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 95/241 (39%), Gaps = 22/241 (9%)
Query: 60 IFSAKELEIATNNYDERKFIKQDSTYKLYKGFWQ-------ERLISVMKYNESYSDSACK 112
++ E E+A + + Q S +Y+G + E +++ NE+ S
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 113 FSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRD-----RIFGAPQPHFE 167
+N + + H+++L+G + +++ E L+ R P
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 168 PLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPE 227
P L +++A IA +AYL+ V +L + + E+ K+ DF + I E
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 228 GETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-------GQSTRDLL 280
+ + + +PE + GVF DV++F VL E+ T G S +L
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 250
Query: 281 R 281
R
Sbjct: 251 R 251
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 14/153 (9%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRLKVAMGI 181
++ H+ +++L E PI I V EY +L D + G + P L+ ++A G+
Sbjct: 236 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 294
Query: 182 AHA--LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFG 239
A+ + Y+H +L + IL E V K+ DF I + E ++F
Sbjct: 295 AYVERMNYVHR---------DLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFP 345
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L EL T
Sbjct: 346 I-KWTAPEAALYGRFTIKSDVWSFGILLTELTT 377
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
Query: 107 SDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHF 166
SDS + + + Q DH HI+KLIG E P+ I + E LR + Q
Sbjct: 48 SDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRK 102
Query: 167 EPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIP 226
L L + A ++ ALAYL + V ++ + +L + + KL DF S +
Sbjct: 103 YSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 159
Query: 227 EGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
+ + ++ + + APE F DV+ F + E+L
Sbjct: 160 DSTYYKASKGKLPI-KWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 95/241 (39%), Gaps = 22/241 (9%)
Query: 60 IFSAKELEIATNNYDERKFIKQDSTYKLYKGFWQ-------ERLISVMKYNESYSDSACK 112
++ E E+A + + Q S +Y+G + E +++ NE+ S
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 113 FSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRD-----RIFGAPQPHFE 167
+N + + H+++L+G + +++ E L+ R P
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 168 PLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPE 227
P L +++A IA +AYL+ V +L + + E+ K+ DF + I E
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 228 GETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-------GQSTRDLL 280
+ + + +PE + GVF DV++F VL E+ T G S +L
Sbjct: 184 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 243
Query: 281 R 281
R
Sbjct: 244 R 244
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 87/220 (39%), Gaps = 15/220 (6%)
Query: 65 ELEIATNNYDERKFIKQDSTYKLYKGFWQ-------ERLISVMKYNESYSDSACKFSINN 117
E E+A + + Q S +Y+G + E +++ NE+ S +N
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 118 IVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRD-----RIFGAPQPHFEPLLLK 172
+ + H+++L+G + +++ E L+ R P P L
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 123
Query: 173 HRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHI 232
+++A IA +AYL+ V +L + + E+ K+ DF + I E +
Sbjct: 124 KMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 180
Query: 233 ITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ +PE + GVF DV++F VL E+ T
Sbjct: 181 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
Query: 107 SDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHF 166
SDS + + + Q DH HI+KLIG E P+ I + E LR + Q
Sbjct: 51 SDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRK 105
Query: 167 EPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIP 226
L L + A ++ ALAYL + V ++ + +L + + KL DF S +
Sbjct: 106 YSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 162
Query: 227 EGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
+ + ++ + + APE F DV+ F + E+L
Sbjct: 163 DSTYYKASKGKLPI-KWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
Query: 107 SDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHF 166
SDS + + + Q DH HI+KLIG E P+ I + E LR + Q
Sbjct: 53 SDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRK 107
Query: 167 EPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIP 226
L L + A ++ ALAYL + V ++ + +L + + KL DF S +
Sbjct: 108 YSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 164
Query: 227 EGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
+ + ++ + + APE F DV+ F + E+L
Sbjct: 165 DSTYYKASKGKLPI-KWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
Query: 107 SDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHF 166
SDS + + + Q DH HI+KLIG E P+ I + E LR + Q
Sbjct: 54 SDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRK 108
Query: 167 EPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIP 226
L L + A ++ ALAYL + V ++ + +L + + KL DF S +
Sbjct: 109 YSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 165
Query: 227 EGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
+ + ++ + + APE F DV+ F + E+L
Sbjct: 166 DSTYYKASKGKLPI-KWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
Query: 107 SDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHF 166
SDS + + + Q DH HI+KLIG E P+ I + E LR + Q
Sbjct: 51 SDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRK 105
Query: 167 EPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIP 226
L L + A ++ ALAYL + V ++ + +L + + KL DF S +
Sbjct: 106 YSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 162
Query: 227 EGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
+ + ++ + + APE F DV+ F + E+L
Sbjct: 163 DSTYYKASKGKLPI-KWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
Query: 107 SDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHF 166
SDS + + + Q DH HI+KLIG E P+ I + E LR + Q
Sbjct: 79 SDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRK 133
Query: 167 EPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIP 226
L L + A ++ ALAYL + V ++ + +L + + KL DF S +
Sbjct: 134 YSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 190
Query: 227 EGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
+ + ++ + + APE F DV+ F + E+L
Sbjct: 191 DSTYYKASKGKLPI-KWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
Query: 107 SDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHF 166
SDS + + + Q DH HI+KLIG E P+ I + E LR + Q
Sbjct: 56 SDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRK 110
Query: 167 EPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIP 226
L L + A ++ ALAYL + V ++ + +L + + KL DF S +
Sbjct: 111 YSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167
Query: 227 EGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
+ + ++ + + APE F DV+ F + E+L
Sbjct: 168 DSTYYKASKGKLPI-KWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 14/126 (11%)
Query: 175 LKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFS--ESISIPEGETHI 232
L + + IA A+ +LH + ++ +L I F ++V K+ DF ++ E E +
Sbjct: 121 LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 233 IT--------RSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQSTR-DLLRTH 283
+T + G Y +PE G ++ K+D+++ +L ELL ST+ + +RT
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTL 237
Query: 284 GSVRHL 289
VR+L
Sbjct: 238 TDVRNL 243
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 14/153 (9%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRLKVAMGI 181
++ H+ +++L E PI I V EY L D + G + P L+ ++A G+
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYI-VMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 182 AHA--LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFG 239
A+ + Y+H +L + IL E V K+ DF + I + E ++F
Sbjct: 128 AYVERMNYVHR---------DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L EL T
Sbjct: 179 I-KWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 23/249 (9%)
Query: 32 KRTLMVRNGARVLKELIASSHGKYNPYRIFSAKELEIATNNYDERKFIKQDSTYKLYKGF 91
KRTL R L E + S N + KE E + + K + + +YKG
Sbjct: 15 KRTLRRLLQERELVEPLTPSGEAPNQALLRILKETE-----FKKIKVLGSGAFGTVYKGL 69
Query: 92 W---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILV 145
W E++ +++M+ E+ S A K ++ A +D+ H+ +L+G CL + + L+
Sbjct: 70 WIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LI 128
Query: 146 FEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLC 205
+ + L D + + H + + ++ L + IA + YL R +V +L +
Sbjct: 129 TQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARN 181
Query: 206 ILFNEENVAKLFDF--SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTF 263
+L K+ DF ++ + E E H W A E ++ + DV+++
Sbjct: 182 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQSDVWSY 239
Query: 264 STVLLELLT 272
+ EL+T
Sbjct: 240 GVTVWELMT 248
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRLKVAMGI 181
++ H+ +++L E PI I V EY +L D + G + P L+ ++A G+
Sbjct: 60 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 118
Query: 182 AHA--LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFG 239
A+ + Y+H +L + IL E V K+ DF + I + E ++F
Sbjct: 119 AYVERMNYVHR---------DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 169
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L EL T
Sbjct: 170 I-KWTAPEAALYGRFTIKSDVWSFGILLTELTT 201
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRLKVAMGI 181
++ H+ +++L E PI I V EY +L D + G + P L+ ++A G+
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 182 AHA--LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFG 239
A+ + Y+H +L + IL E V K+ DF + I + E ++F
Sbjct: 128 AYVERMNYVHR---------DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L EL T
Sbjct: 179 I-KWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRLKVAMGI 181
++ H+ +++L E PI I V EY +L D + G + P L+ ++A G+
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYI-VCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 182 AHA--LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFG 239
A+ + Y+H +L + IL E V K+ DF + I + E ++F
Sbjct: 128 AYVERMNYVHR---------DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L EL T
Sbjct: 179 I-KWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRLKVAMGI 181
++ H+ +++L E PI +V EY +L D + G + P L+ ++A G+
Sbjct: 58 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 116
Query: 182 AHA--LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFG 239
A+ + Y+H +L + IL E V K+ DF + I + E ++F
Sbjct: 117 AYVERMNYVHR---------DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 167
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L EL T
Sbjct: 168 I-KWTAPEAALYGRFTIKSDVWSFGILLTELTT 199
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 15/159 (9%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRI---FGAPQPHFEPLLLKHRLKVAMG 180
++H++++K G E I L EY L DRI G P+P + H+L +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 118
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
H + H R I NL L +E + K+ DF + + G
Sbjct: 119 YLHGIGITH----RDIKPENL-----LLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 241 WTYSAPE-YKRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
Y APE KR E +DV++ VL +L G+ D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 15/159 (9%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRI---FGAPQPHFEPLLLKHRLKVAMG 180
++H++++K G E I L EY L DRI G P+P + H+L +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 118
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
H + H R I NL L +E + K+ DF + + G
Sbjct: 119 YLHGIGITH----RDIKPENL-----LLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 241 WTYSAPE-YKRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
Y APE KR E +DV++ VL +L G+ D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 19/164 (11%)
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ ++H +I+KL G + P P +V E+ L R+ P + L+ L +A+GI
Sbjct: 78 SNLNHPNIVKLYGL-MHNP-PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFN--EENV---AKLFDFSESISIPEGETHIITRS 236
Y+ P PIV +L S I +EN AK+ DF S + H ++
Sbjct: 136 E----YMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS----QQSVHSVS-G 185
Query: 237 RFGAWTYSAPEY--KRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
G + + APE + EK D Y+F+ +L +LTG+ D
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 65/165 (39%), Gaps = 15/165 (9%)
Query: 118 IVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRI---FGAPQPHFEPLLLKHR 174
I ++H++++K G E I L EY L DRI G P+P + H+
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQ 113
Query: 175 LKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIIT 234
L + H + H R I NL L +E + K+ DF + +
Sbjct: 114 LMAGVVYLHGIGITH----RDIKPENL-----LLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 235 RSRFGAWTYSAPE-YKRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
G Y APE KR E +DV++ VL +L G+ D
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 15/159 (9%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRI---FGAPQPHFEPLLLKHRLKVAMG 180
++H++++K G E I L EY L DRI G P+P + H+L +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 119
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
H + H R I NL L +E + K+ DF + + G
Sbjct: 120 YLHGIGITH----RDIKPENL-----LLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 170
Query: 241 WTYSAPE-YKRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
Y APE KR E +DV++ VL +L G+ D
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 15/159 (9%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRI---FGAPQPHFEPLLLKHRLKVAMG 180
++H++++K G E I L EY L DRI G P+P + H+L +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 118
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
H + H R I NL L +E + K+ DF + + G
Sbjct: 119 YLHGIGITH----RDIKPENL-----LLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 241 WTYSAPE-YKRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
Y APE KR E +DV++ VL +L G+ D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 15/159 (9%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRI---FGAPQPHFEPLLLKHRLKVAMG 180
++H++++K G E I L EY L DRI G P+P + H+L +
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 117
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
H + H R I NL L +E + K+ DF + + G
Sbjct: 118 YLHGIGITH----RDIKPENL-----LLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 168
Query: 241 WTYSAPE-YKRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
Y APE KR E +DV++ VL +L G+ D
Sbjct: 169 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 65/165 (39%), Gaps = 15/165 (9%)
Query: 118 IVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRI---FGAPQPHFEPLLLKHR 174
I ++H++++K G E I L EY L DRI G P+P + H+
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQ 112
Query: 175 LKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIIT 234
L + H + H R I NL L +E + K+ DF + +
Sbjct: 113 LMAGVVYLHGIGITH----RDIKPENL-----LLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 235 RSRFGAWTYSAPE-YKRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
G Y APE KR E +DV++ VL +L G+ D
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRLKVAMGI 181
++ H+ +++L E PI I V EY +L D + G + P L+ ++A G+
Sbjct: 69 KIRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 182 AHA--LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFG 239
A+ + Y+H +L + IL E V K+ DF + I + E ++F
Sbjct: 128 AYVERMNYVHR---------DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L EL T
Sbjct: 179 I-KWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 15/159 (9%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRI---FGAPQPHFEPLLLKHRLKVAMG 180
++H++++K G E I L EY L DRI G P+P + H+L +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 118
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
H + H R I NL L +E + K+ DF + + G
Sbjct: 119 YLHGIGITH----RDIKPENL-----LLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 241 WTYSAPE-YKRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
Y APE KR E +DV++ VL +L G+ D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 15/159 (9%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRI---FGAPQPHFEPLLLKHRLKVAMG 180
++H++++K G E I L EY L DRI G P+P + H+L +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 118
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
H + H R I NL L +E + K+ DF + + G
Sbjct: 119 YLHGIGITH----RDIKPENL-----LLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 241 WTYSAPE-YKRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
Y APE KR E +DV++ VL +L G+ D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 65/165 (39%), Gaps = 15/165 (9%)
Query: 118 IVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRI---FGAPQPHFEPLLLKHR 174
I ++H++++K G E I L EY L DRI G P+P + H+
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQ 112
Query: 175 LKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIIT 234
L + H + H R I NL L +E + K+ DF + +
Sbjct: 113 LMAGVVYLHGIGITH----RDIKPENL-----LLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 235 RSRFGAWTYSAPE-YKRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
G Y APE KR E +DV++ VL +L G+ D
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 15/159 (9%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRI---FGAPQPHFEPLLLKHRLKVAMG 180
++H++++K G E I L EY L DRI G P+P + H+L +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 118
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
H + H R I NL L +E + K+ DF + + G
Sbjct: 119 YLHGIGITH----RDIKPENL-----LLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 241 WTYSAPE-YKRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
Y APE KR E +DV++ VL +L G+ D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 23/175 (13%)
Query: 123 QMDHKHILKLIGCCLE-TPIPILV--FEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAM 179
Q H +I++LIG C + PI I++ + G++ T R GA L +K L++
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGAR------LRVKTLLQMVG 220
Query: 180 GIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFG 239
A + YL + + +L + L E+NV K+ DF S +G R
Sbjct: 221 DAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQV 277
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLEL----------LTGQSTRDLLRTHG 284
++APE G ++ + DV++F +L E L+ Q TR+ + G
Sbjct: 278 PVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGG 332
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 15/159 (9%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRI---FGAPQPHFEPLLLKHRLKVAMG 180
++H++++K G E I L EY L DRI G P+P + H+L +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 118
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
H + H R I NL L +E + K+ DF + + G
Sbjct: 119 YLHGIGITH----RDIKPENL-----LLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 241 WTYSAPE-YKRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
Y APE KR E +DV++ VL +L G+ D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 15/159 (9%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRI---FGAPQPHFEPLLLKHRLKVAMG 180
++H++++K G E I L EY L DRI G P+P + H+L +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 118
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
H + H R I NL L +E + K+ DF + + G
Sbjct: 119 YLHGIGITH----RDIKPENL-----LLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 241 WTYSAPE-YKRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
Y APE KR E +DV++ VL +L G+ D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 15/159 (9%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRI---FGAPQPHFEPLLLKHRLKVAMG 180
++H++++K G E I L EY L DRI G P+P + H+L +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 119
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
H + H R I NL L +E + K+ DF + + G
Sbjct: 120 YLHGIGITH----RDIKPENL-----LLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 241 WTYSAPE-YKRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
Y APE KR E +DV++ VL +L G+ D
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 8/184 (4%)
Query: 94 ERLISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTT 153
E ++V NES S +N H+++L+G + ++V E +
Sbjct: 46 ETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 105
Query: 154 LRD-----RIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILF 208
L+ R P P L+ +++A IA +AYL+ + V +L + +
Sbjct: 106 LKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMV 162
Query: 209 NEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLL 268
+ K+ DF + I E + + + APE + GVF D+++F VL
Sbjct: 163 AHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW 222
Query: 269 ELLT 272
E+ +
Sbjct: 223 EITS 226
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 15/178 (8%)
Query: 97 ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILV--FEYGEYTT- 153
+++ SDS + + + Q DH HI+KLIG E P+ I++ GE +
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSF 100
Query: 154 LRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENV 213
L+ R F L L + A ++ ALAYL + V ++ + +L + +
Sbjct: 101 LQVRKFS--------LDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDC 149
Query: 214 AKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
KL DF S + + ++ + + APE F DV+ F + E+L
Sbjct: 150 VKLGDFGLSRYMEDSTXXKASKGKLPI-KWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 15/159 (9%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRI---FGAPQPHFEPLLLKHRLKVAMG 180
++H++++K G E I L EY L DRI G P+P + H+L +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 118
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
H + H R I NL L +E + K+ DF + + G
Sbjct: 119 YLHGIGITH----RDIKPENL-----LLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 241 WTYSAPE-YKRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
Y APE KR E +DV++ VL +L G+ D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 74/181 (40%), Gaps = 19/181 (10%)
Query: 108 DSACKFSINNIVYAAQM-----DHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAP 162
D A + ++++V +M HK+I+ L+G C + ++ Y LR+ +
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARR 136
Query: 163 QPHF-----------EPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEE 211
P E + K + +A + YL + + +L + +L E
Sbjct: 137 PPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTEN 193
Query: 212 NVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
NV K+ DF + I + + T + + APE V+ + DV++F ++ E+
Sbjct: 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 272 T 272
T
Sbjct: 254 T 254
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 94/241 (39%), Gaps = 22/241 (9%)
Query: 60 IFSAKELEIATNNYDERKFIKQDSTYKLYKGFWQ-------ERLISVMKYNESYSDSACK 112
++ E E+A + + Q S +Y+G + E +++ NE+ S
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 113 FSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRD-----RIFGAPQPHFE 167
+N + + H+++L+G + +++ E L+ R P
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 168 PLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPE 227
P L +++A IA +AYL+ V +L + E+ K+ DF + I E
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE 177
Query: 228 GETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-------GQSTRDLL 280
+ + + +PE + GVF DV++F VL E+ T G S +L
Sbjct: 178 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 237
Query: 281 R 281
R
Sbjct: 238 R 238
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 93/236 (39%), Gaps = 22/236 (9%)
Query: 65 ELEIATNNYDERKFIKQDSTYKLYKGFWQ-------ERLISVMKYNESYSDSACKFSINN 117
E E+A + + Q S +Y+G + E +++ NE+ S +N
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 118 IVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRD-----RIFGAPQPHFEPLLLK 172
+ + H+++L+G + +++ E L+ R P P L
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 173 HRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHI 232
+++A IA +AYL+ V +L + + E+ K+ DF + I E + +
Sbjct: 126 KMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 233 ITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-------GQSTRDLLR 281
+ +PE + GVF DV++F VL E+ T G S +LR
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 238
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 107 SDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILV--FEYGEYTT-LRDRIFGAPQ 163
SDS + + + Q DH HI+KLIG E P+ I++ GE + L+ R F
Sbjct: 51 SDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFS--- 107
Query: 164 PHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESI 223
L L + A ++ ALAYL + V ++ + +L + + KL DF S
Sbjct: 108 -----LDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSR 159
Query: 224 SIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
+ + + ++ + + APE F DV+ F + E+L
Sbjct: 160 YMEDSTYYKASKGKLPI-KWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 12/149 (8%)
Query: 123 QMDHKHILKLIGCCLETPIPI-LVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
Q+ H ++++L+G +E + +V EY +L D + + L LK ++ +
Sbjct: 61 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLDV 117
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
A+ YL V +L + +L +E+NVAK+ DF + E + T W
Sbjct: 118 CEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT---KEASSTQDTGKLPVKW 171
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLEL 270
T APE R F+ K DV++F +L E+
Sbjct: 172 T--APEALREAAFSTKSDVWSFGILLWEI 198
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 15/159 (9%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRI---FGAPQPHFEPLLLKHRLKVAMG 180
++H++++K G E I L EY L DRI G P+P + H+L +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 119
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
H + H R I NL L +E + K+ DF + + G
Sbjct: 120 YLHGIGITH----RDIKPENL-----LLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 241 WTYSAPE-YKRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
Y APE KR E +DV++ VL +L G+ D
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 15/159 (9%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRI---FGAPQPHFEPLLLKHRLKVAMG 180
++H++++K G E I L EY L DRI G P+P + H+L +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 119
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
H + H R I NL L +E + K+ DF + + G
Sbjct: 120 YLHGIGITH----RDIKPENL-----LLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 241 WTYSAPE-YKRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
Y APE KR E +DV++ VL +L G+ D
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 15/159 (9%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRI---FGAPQPHFEPLLLKHRLKVAMG 180
++H++++K G E I L EY L DRI G P+P + H+L +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 119
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
H + H R I NL L +E + K+ DF + + G
Sbjct: 120 YLHGIGITH----RDIKPENL-----LLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 241 WTYSAPE-YKRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
Y APE KR E +DV++ VL +L G+ D
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 15/159 (9%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRI---FGAPQPHFEPLLLKHRLKVAMG 180
++H++++K G E I L EY L DRI G P+P + H+L +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 118
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
H + H R I NL L +E + K+ DF + + G
Sbjct: 119 YLHGIGITH----RDIKPENL-----LLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 241 WTYSAPE-YKRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
Y APE KR E +DV++ VL +L G+ D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 15/159 (9%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRI---FGAPQPHFEPLLLKHRLKVAMG 180
++H++++K G E I L EY L DRI G P+P + H+L +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 119
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
H + H R I NL L +E + K+ DF + + G
Sbjct: 120 YLHGIGITH----RDIKPENL-----LLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 241 WTYSAPE-YKRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
Y APE KR E +DV++ VL +L G+ D
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 74/181 (40%), Gaps = 19/181 (10%)
Query: 108 DSACKFSINNIVYAAQM-----DHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAP 162
D A + ++++V +M HK+I+ L+G C + ++ Y LR+ +
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARR 136
Query: 163 QPHF-----------EPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEE 211
P E + K + +A + YL + + +L + +L E
Sbjct: 137 PPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTEN 193
Query: 212 NVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
NV K+ DF + I + + T + + APE V+ + DV++F ++ E+
Sbjct: 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 272 T 272
T
Sbjct: 254 T 254
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 14/153 (9%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRLKVAMGI 181
++ H+ +++L E PI I V EY L D + G + P L+ ++A G+
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 182 AHA--LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFG 239
A+ + Y+H +L + IL E V K+ DF + I + E ++F
Sbjct: 128 AYVERMNYVHR---------DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L EL T
Sbjct: 179 I-KWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 23/175 (13%)
Query: 123 QMDHKHILKLIGCCLE-TPIPILV--FEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAM 179
Q H +I++LIG C + PI I++ + G++ T R GA L +K L++
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGAR------LRVKTLLQMVG 220
Query: 180 GIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFG 239
A + YL + + +L + L E+NV K+ DF S +G R
Sbjct: 221 DAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQV 277
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLEL----------LTGQSTRDLLRTHG 284
++APE G ++ + DV++F +L E L+ Q TR+ + G
Sbjct: 278 PVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGG 332
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 69/152 (45%), Gaps = 8/152 (5%)
Query: 126 HKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFE-----PLLLKHRLKVAMG 180
H++I+ L+G C +++ EY Y L + + + + PL L+ L +
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 168
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A +A+L + + ++ + +L +VAK+ DF + I +I+ +
Sbjct: 169 VAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 225
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE V+ + DV+++ +L E+ +
Sbjct: 226 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 86/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 33 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 92
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 93 VQ-LIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 144
Query: 201 LISLCILFNEENVAKLFDFSES--ISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF + + E E H W A E ++ +
Sbjct: 145 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 202
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 203 DVWSYGVTVWELMT 216
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 14/160 (8%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRD-----------RIFGAPQPHFEPLLLK 172
+ H+HI+K G C + I+VFEY ++ L + G P+ L L
Sbjct: 74 LQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLS 133
Query: 173 HRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHI 232
L +A IA + YL + V +L + L + K+ DF S + + +
Sbjct: 134 QMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYR 190
Query: 233 ITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ + PE F + DV++F +L E+ T
Sbjct: 191 VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 86/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 33 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 92
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 93 VQ-LIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 144
Query: 201 LISLCILFNEENVAKLFDFSES--ISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF + + E E H W A E ++ +
Sbjct: 145 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 202
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 203 DVWSYGVTVWELMT 216
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 71/155 (45%), Gaps = 11/155 (7%)
Query: 126 HKHILKLIGCCLETPIPILVF----EYGEYTTL----RDRIFGAPQPHFEPLLLKHRLKV 177
H +++ L+G C + P++V ++G +T R+ + + L L+H +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 178 AMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSR 237
+ +A + +L R + +L + IL +E+NV K+ DF + I + ++
Sbjct: 150 SFQVAKGMEFLAS---RKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 238 FGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE V+ + DV++F +L E+ +
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 86/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 35 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 94
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 95 VQ-LIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 146
Query: 201 LISLCILFNEENVAKLFDFSES--ISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF + + E E H W A E ++ +
Sbjct: 147 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 204
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 205 DVWSYGVTVWELMT 218
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 126 HKHILKLIGCCLETPIPILVF----EYGEYTT-LRDR-----IFGAPQPHFEPLL-LKHR 174
H +++ L+G C + P++V ++G +T LR + + P+ ++ L L+H
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 175 LKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIIT 234
+ + +A + +L R + +L + IL +E+NV K+ DF + I + +
Sbjct: 151 ICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 235 RSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE V+ + DV++F +L E+ +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 69/152 (45%), Gaps = 8/152 (5%)
Query: 126 HKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFE-----PLLLKHRLKVAMG 180
H++I+ L+G C +++ EY Y L + + + + PL L+ L +
Sbjct: 101 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 160
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A +A+L + + ++ + +L +VAK+ DF + I +I+ +
Sbjct: 161 VAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 217
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE V+ + DV+++ +L E+ +
Sbjct: 218 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 12/149 (8%)
Query: 123 QMDHKHILKLIGCCLETPIPI-LVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
Q+ H ++++L+G +E + +V EY +L D + + L LK ++ +
Sbjct: 70 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLDV 126
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
A+ YL V +L + +L +E+NVAK+ DF + E + T W
Sbjct: 127 CEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT---KEASSTQDTGKLPVKW 180
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLEL 270
T APE R F+ K DV++F +L E+
Sbjct: 181 T--APEALREKKFSTKSDVWSFGILLWEI 207
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 80/178 (44%), Gaps = 13/178 (7%)
Query: 97 ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRD 156
I V+K +D+ I++ Q+D+ +I++LIG C + +LV E L
Sbjct: 368 IKVLKQGTEKADTEEMMREAQIMH--QLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHK 424
Query: 157 RIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKL 216
+ G E + + + ++ ++ + YL + V NL + +L + AK+
Sbjct: 425 FLVG----KREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKI 477
Query: 217 FDFSESISIPEGETHIITRSRFGAW--TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
DF S ++ +++ RS G W + APE F+ + DV+++ + E L+
Sbjct: 478 SDFGLSKALGADDSYYTARSA-GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 11/216 (5%)
Query: 62 SAKELEIATNNYDERKFIKQDSTYKLYKGFWQERLISVMKYNESYSDSACKFSINNIVYA 121
S+ + EI + I S +YKG W + M + + + N +
Sbjct: 27 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 86
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ H +IL +G + + I V ++ E ++L + + FE + L + +A
Sbjct: 87 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH-IIETKFEMIKL---IDIARQT 141
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
A + YLH + I+ +L S I +E+ K+ DF + G+
Sbjct: 142 AQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI 198
Query: 242 TYSAPEYKR---GGVFNEKLDVYTFSTVLLELLTGQ 274
+ APE R ++ + DVY F VL EL+TGQ
Sbjct: 199 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 11/216 (5%)
Query: 62 SAKELEIATNNYDERKFIKQDSTYKLYKGFWQERLISVMKYNESYSDSACKFSINNIVYA 121
S+ + EI + I S +YKG W + M + + + N +
Sbjct: 19 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 78
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ H +IL +G + + I V ++ E ++L + + FE + L + +A
Sbjct: 79 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH-IIETKFEMIKL---IDIARQT 133
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
A + YLH + I+ +L S I +E+ K+ DF + G+
Sbjct: 134 AQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI 190
Query: 242 TYSAPEYKR---GGVFNEKLDVYTFSTVLLELLTGQ 274
+ APE R ++ + DVY F VL EL+TGQ
Sbjct: 191 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 74/157 (47%), Gaps = 13/157 (8%)
Query: 126 HKHILKLIGCCLETPIPILVF----EYGEYTT-LRDR----IFGAPQPHFEPLL-LKHRL 175
H +++ L+G C + P++V ++G +T LR + + P+ ++ L L+H +
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
+ +A + +L R + +L + IL +E+NV K+ DF + I + +
Sbjct: 152 XYSFQVAKGMEFLAS---RKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE V+ + DV++F +L E+ +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 12/149 (8%)
Query: 123 QMDHKHILKLIGCCLETPIPI-LVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
Q+ H ++++L+G +E + +V EY +L D + + L LK ++ +
Sbjct: 55 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLDV 111
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
A+ YL V +L + +L +E+NVAK+ DF + E + T W
Sbjct: 112 CEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT---KEASSTQDTGKLPVKW 165
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLEL 270
T APE R F+ K DV++F +L E+
Sbjct: 166 T--APEALREKKFSTKSDVWSFGILLWEI 192
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 76/187 (40%), Gaps = 22/187 (11%)
Query: 124 MDHKHILKLIGCCLETPIP--ILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ H +I+K G C L+ E+ Y +LR+ + Q H E + L+ I
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL----QKHKERIDHIKLLQYTSQI 126
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEG-ETHIITRSRFGA 240
+ YL + + +L + IL EN K+ DF + +P+ E +
Sbjct: 127 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-----GQSTRDLLRTHGS-------VRH 288
+ APE F+ DV++F VL EL T + +R G+ V H
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 243
Query: 289 LIEYLKN 295
LIE LKN
Sbjct: 244 LIELLKN 250
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 12/149 (8%)
Query: 123 QMDHKHILKLIGCCLETPIPI-LVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
Q+ H ++++L+G +E + +V EY +L D + + L LK ++ +
Sbjct: 242 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLDV 298
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
A+ YL V +L + +L +E+NVAK+ DF + E + T W
Sbjct: 299 CEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT---KEASSTQDTGKLPVKW 352
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLEL 270
T APE R F+ K DV++F +L E+
Sbjct: 353 T--APEALREKKFSTKSDVWSFGILLWEI 379
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 196 IVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFN 255
IV+ +L IL ++ ++ D ++ +PEG+T + R G Y APE + +
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERYT 363
Query: 256 EKLDVYTFSTVLLELLTGQS 275
D + +L E++ GQS
Sbjct: 364 FSPDWWALGCLLYEMIAGQS 383
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 86/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 33 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 92
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 93 VQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 144
Query: 201 LISLCILFNEENVAKLFDFSES--ISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF + + E E H W A E ++ +
Sbjct: 145 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 202
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 203 DVWSYGVTVWELMT 216
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 116 NNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIF---GAPQPHFEPLLLK 172
++++ +DH HI++L+G C + + LV +Y +L D + GA P LLL
Sbjct: 64 DHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQ---LLLN 119
Query: 173 HRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHI 232
+++A G + YL +V NL + +L + ++ DF + +P + +
Sbjct: 120 WGVQIAKG----MYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL 172
Query: 233 ITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ + A E G + + DV+++ + EL+T
Sbjct: 173 LYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 196 IVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFN 255
IV+ +L IL ++ ++ D ++ +PEG+T + R G Y APE + +
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERYT 363
Query: 256 EKLDVYTFSTVLLELLTGQS 275
D + +L E++ GQS
Sbjct: 364 FSPDWWALGCLLYEMIAGQS 383
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 116 NNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIF---GAPQPHFEPLLLK 172
++++ +DH HI++L+G C + + LV +Y +L D + GA P LLL
Sbjct: 82 DHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQ---LLLN 137
Query: 173 HRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHI 232
+++A G + YL +V NL + +L + ++ DF + +P + +
Sbjct: 138 WGVQIAKG----MYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL 190
Query: 233 ITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ + A E G + + DV+++ + EL+T
Sbjct: 191 LYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 69/173 (39%), Gaps = 28/173 (16%)
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTL----------------------RDRIF 159
A+ D+ +I+KL+G C L+FEY Y L R R+
Sbjct: 105 AEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV- 163
Query: 160 GAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDF 219
+P P PL +L +A +A +AYL R V +L + L E V K+ DF
Sbjct: 164 SSPGP--PPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADF 218
Query: 220 SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
S +I + + + + PE + + DV+ + VL E+ +
Sbjct: 219 GLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 32 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 91
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 92 VQ-LIMQLMPFGXLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 143
Query: 201 LISLCILFNEENVAKLFDF--SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF ++ + E E H W A E ++ +
Sbjct: 144 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 201
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 202 DVWSYGVTVWELMT 215
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 14/192 (7%)
Query: 87 LYKGFWQER------LISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W +++ NE+ A ++ + A MDH H+++L+G CL +P
Sbjct: 31 VYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCL-SP 89
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
LV + + L + + H + + + L + IA + YL R +V +
Sbjct: 90 TIQLVTQLMPHGCLLEYV----HEHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRD 142
Query: 201 LISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDV 260
L + +L N K+ DF + + E + A E F + DV
Sbjct: 143 LAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDV 202
Query: 261 YTFSTVLLELLT 272
+++ + EL+T
Sbjct: 203 WSYGVTIWELMT 214
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
Query: 126 HKHILKLIGCCLETPIPILVF----EYGEYTT-LRDR------IFGAPQPHFEPLL-LKH 173
H +++ L+G C + P++V ++G +T LR + AP+ ++ L L+H
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEH 151
Query: 174 RLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHII 233
+ + +A + +L R + +L + IL +E+NV K+ DF + I + ++
Sbjct: 152 LICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 208
Query: 234 TRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE V+ + DV++F +L E+ +
Sbjct: 209 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 38 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 97
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 98 VQ-LIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 149
Query: 201 LISLCILFNEENVAKLFDF--SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF ++ + E E H W A E ++ +
Sbjct: 150 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 207
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 208 DVWSYGVTVWELMT 221
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 11/216 (5%)
Query: 62 SAKELEIATNNYDERKFIKQDSTYKLYKGFWQERLISVMKYNESYSDSACKFSINNIVYA 121
S+ + EI + I S +YKG W + M + + + N +
Sbjct: 27 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 86
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ H +IL +G + + I V ++ E ++L + + FE + L + +A
Sbjct: 87 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH-IIETKFEMIKL---IDIARQT 141
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
A + YLH + I+ +L S I +E+ K+ DF + G+
Sbjct: 142 AQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 198
Query: 242 TYSAPEYKR---GGVFNEKLDVYTFSTVLLELLTGQ 274
+ APE R ++ + DVY F VL EL+TGQ
Sbjct: 199 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 34 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 93
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 94 VQ-LIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 145
Query: 201 LISLCILFNEENVAKLFDF--SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF ++ + E E H W A E ++ +
Sbjct: 146 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 203
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 204 DVWSYGVTVWELMT 217
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 31 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 91 VQ-LIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 142
Query: 201 LISLCILFNEENVAKLFDF--SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF ++ + E E H W A E ++ +
Sbjct: 143 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 200
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 201 DVWSYGVTVWELMT 214
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 33 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 92
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 93 VQ-LIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 144
Query: 201 LISLCILFNEENVAKLFDF--SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF ++ + E E H W A E ++ +
Sbjct: 145 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 202
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 203 DVWSYGVTVWELMT 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 86/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 31 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 91 VQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 142
Query: 201 LISLCILFNEENVAKLFDFSES--ISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF + + E E H W A E ++ +
Sbjct: 143 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 200
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 201 DVWSYGVTVWELMT 214
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 32 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 91
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 92 VQ-LIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 143
Query: 201 LISLCILFNEENVAKLFDF--SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF ++ + E E H W A E ++ +
Sbjct: 144 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 201
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 202 DVWSYGVTVWELMT 215
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
Query: 126 HKHILKLIGCCLETPIPILVF----EYGEYTT-LRDR------IFGAPQPHFEPLL-LKH 173
H +++ L+G C + P++V ++G +T LR + AP+ ++ L L+H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 174 RLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHII 233
+ + +A + +L R + +L + IL +E+NV K+ DF + I + ++
Sbjct: 141 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 234 TRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE V+ + DV++F +L E+ +
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 26/161 (16%)
Query: 175 LKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFS--ESISIPEGETHI 232
L + + IA A+ +LH + ++ +L I F ++V K+ DF ++ E E +
Sbjct: 167 LHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 233 IT--------RSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQSTR-DLLRTH 283
+T + G Y +PE G ++ K+D+++ +L ELL ST+ + +R
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRII 283
Query: 284 GSVRHL---IEYLKNYLQNNRFTEIADPIIVQD-LSCTETE 320
VR+L + + + Y Q + ++VQD LS + TE
Sbjct: 284 TDVRNLKFPLLFTQKYPQEH--------MMVQDMLSPSPTE 316
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 74/181 (40%), Gaps = 8/181 (4%)
Query: 93 QERLISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYT 152
+E +++ Y+D + ++ Q DH +I+ L G + +++ EY E
Sbjct: 56 REICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENG 115
Query: 153 TLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEEN 212
+L D F + L L+ GI + YL V +L + IL N
Sbjct: 116 SL-DAFLRKNDGRFTVIQLVGMLR---GIGSGMKYLS---DMSAVHRDLAARNILVNSNL 168
Query: 213 VAKLFDFSESISIPEG-ETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
V K+ DF S + + E TR ++APE F DV+++ V+ E++
Sbjct: 169 VCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 228
Query: 272 T 272
+
Sbjct: 229 S 229
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 11/216 (5%)
Query: 62 SAKELEIATNNYDERKFIKQDSTYKLYKGFWQERLISVMKYNESYSDSACKFSINNIVYA 121
S+ + EI + I S +YKG W + M + + + N +
Sbjct: 26 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 85
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ H +IL +G + + I V ++ E ++L + + FE + L + +A
Sbjct: 86 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH-IIETKFEMIKL---IDIARQT 140
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
A + YLH + I+ +L S I +E+ K+ DF + G+
Sbjct: 141 AQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 197
Query: 242 TYSAPEYKR---GGVFNEKLDVYTFSTVLLELLTGQ 274
+ APE R ++ + DVY F VL EL+TGQ
Sbjct: 198 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 35 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 94
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 95 VQ-LIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 146
Query: 201 LISLCILFNEENVAKLFDF--SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF ++ + E E H W A E ++ +
Sbjct: 147 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 204
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 205 DVWSYGVTVWELMT 218
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 86/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 38 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 97
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 98 VQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 149
Query: 201 LISLCILFNEENVAKLFDFSES--ISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF + + E E H W A E ++ +
Sbjct: 150 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 207
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 208 DVWSYGVTVWELMT 221
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
Query: 126 HKHILKLIGCCLETPIPILVF----EYGEYTT-LRDR------IFGAPQPHFEPLL-LKH 173
H +++ L+G C + P++V ++G +T LR + AP+ ++ L L+H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 174 RLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHII 233
+ + +A + +L R + +L + IL +E+NV K+ DF + I + ++
Sbjct: 141 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 234 TRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE V+ + DV++F +L E+ +
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRF-G 239
I+ AL YLH R I++ +L +L + E KL D+ EG T S F G
Sbjct: 130 ISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYG---MCKEGLRPGDTTSXFCG 183
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQSTRDLLRTHGSVRHLIEYLKNYL 297
Y APE RG + +D + ++ E++ G+S D++ GS + + ++YL
Sbjct: 184 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV---GSSDNPDQNTEDYL 238
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 74/181 (40%), Gaps = 8/181 (4%)
Query: 93 QERLISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYT 152
+E +++ Y+D + ++ Q DH +I+ L G + +++ EY E
Sbjct: 41 REICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENG 100
Query: 153 TLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEEN 212
+L D F + L L+ GI + YL V +L + IL N
Sbjct: 101 SL-DAFLRKNDGRFTVIQLVGMLR---GIGSGMKYLS---DMSYVHRDLAARNILVNSNL 153
Query: 213 VAKLFDFSESISIPEG-ETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
V K+ DF S + + E TR ++APE F DV+++ V+ E++
Sbjct: 154 VCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 213
Query: 272 T 272
+
Sbjct: 214 S 214
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 32/188 (17%)
Query: 120 YAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHR--LKV 177
YAA ++ ++ +K + + + EY E TL D I H E L + ++
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLI------HSENLNQQRDEYWRL 121
Query: 178 AMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFS--------------ESI 223
I AL+Y+H + I+ +L + I +E K+ DF +S
Sbjct: 122 FRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 224 SIPEGETHIITRSRFGAWTYSAPEYKRG-GVFNEKLDVYTFSTVLLELL----TGQSTRD 278
++P G + +T S G Y A E G G +NEK+D+Y+ + E++ TG +
Sbjct: 179 NLP-GSSDNLT-SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVN 236
Query: 279 LLRTHGSV 286
+L+ SV
Sbjct: 237 ILKKLRSV 244
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 21/168 (12%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIF-GAPQPHFEPLLLKHRLKVAMGI 181
++ H +++L E PI I V EY +L D + G + P L+ +VA G+
Sbjct: 60 KLKHDKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGM 118
Query: 182 AHA--LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFG 239
A+ + Y+H +L S IL + K+ DF + I + E ++F
Sbjct: 119 AYIERMNYIHR---------DLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFP 169
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-------GQSTRDLL 280
++APE G F K DV++F +L EL+T G + R++L
Sbjct: 170 I-KWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVL 216
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 32/188 (17%)
Query: 120 YAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHR--LKV 177
YAA ++ ++ +K + + + EY E TL D I H E L + ++
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI------HSENLNQQRDEYWRL 121
Query: 178 AMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFS--------------ESI 223
I AL+Y+H + I+ +L + I +E K+ DF +S
Sbjct: 122 FRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 224 SIPEGETHIITRSRFGAWTYSAPEYKRG-GVFNEKLDVYTFSTVLLELL----TGQSTRD 278
++P G + +T S G Y A E G G +NEK+D+Y+ + E++ TG +
Sbjct: 179 NLP-GSSDNLT-SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVN 236
Query: 279 LLRTHGSV 286
+L+ SV
Sbjct: 237 ILKKLRSV 244
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 14/192 (7%)
Query: 87 LYKGFWQER------LISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W +++ NE+ A ++ + A MDH H+++L+G CL +P
Sbjct: 54 VYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCL-SP 112
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
LV + + L + + H + + + L + IA + YL R +V +
Sbjct: 113 TIQLVTQLMPHGCLLEYV----HEHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRD 165
Query: 201 LISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDV 260
L + +L N K+ DF + + E + A E F + DV
Sbjct: 166 LAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDV 225
Query: 261 YTFSTVLLELLT 272
+++ + EL+T
Sbjct: 226 WSYGVTIWELMT 237
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
Query: 126 HKHILKLIGCCLETPIPILVF----EYGEYTT-LRDR------IFGAPQPHFEPLL-LKH 173
H +++ L+G C + P++V ++G +T LR + AP+ ++ L L+H
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 174 RLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHII 233
+ + +A + +L R + +L + IL +E+NV K+ DF + I + ++
Sbjct: 150 LICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 206
Query: 234 TRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE V+ + DV++F +L E+ +
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 11/216 (5%)
Query: 62 SAKELEIATNNYDERKFIKQDSTYKLYKGFWQERLISVMKYNESYSDSACKFSINNIVYA 121
S+ + EI + I S +YKG W + M + + + N +
Sbjct: 1 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 60
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ H +IL +G + + I V ++ E ++L + + FE + L + +A
Sbjct: 61 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH-IIETKFEMIKL---IDIARQT 115
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
A + YLH + I+ +L S I +E+ K+ DF + G+
Sbjct: 116 AQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 172
Query: 242 TYSAPEYKR---GGVFNEKLDVYTFSTVLLELLTGQ 274
+ APE R ++ + DVY F VL EL+TGQ
Sbjct: 173 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
Query: 126 HKHILKLIGCCLETPIPILVF----EYGEYTT-LRDR------IFGAPQPHFEPLL-LKH 173
H +++ L+G C + P++V ++G +T LR + AP+ ++ L L+H
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 174 RLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHII 233
+ + +A + +L R + +L + IL +E+NV K+ DF + I + ++
Sbjct: 187 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 243
Query: 234 TRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE V+ + DV++F +L E+ +
Sbjct: 244 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRF-G 239
I+ AL YLH R I++ +L +L + E KL D+ EG T S F G
Sbjct: 162 ISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYG---MCKEGLRPGDTTSTFCG 215
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQSTRDLLRTHGSVRHLIEYLKNYL 297
Y APE RG + +D + ++ E++ G+S D++ GS + + ++YL
Sbjct: 216 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV---GSSDNPDQNTEDYL 270
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 11/216 (5%)
Query: 62 SAKELEIATNNYDERKFIKQDSTYKLYKGFWQERLISVMKYNESYSDSACKFSINNIVYA 121
S+ + EI + I S +YKG W + M + + + N +
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ H +IL +G + + I V ++ E ++L + + FE + L + +A
Sbjct: 64 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH-IIETKFEMIKL---IDIARQT 118
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
A + YLH + I+ +L S I +E+ K+ DF + G+
Sbjct: 119 AQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 175
Query: 242 TYSAPEYKR---GGVFNEKLDVYTFSTVLLELLTGQ 274
+ APE R ++ + DVY F VL EL+TGQ
Sbjct: 176 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 15/159 (9%)
Query: 126 HKHILKLIGCCLETPIPILVF----EYGEYTT-LRDR------IFGAPQPHFEPLL-LKH 173
H +++ L+G C + P++V ++G +T LR + AP+ ++ L L+H
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 174 RLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHII 233
+ + +A + +L R + +L + IL +E+NV K+ DF + I + +
Sbjct: 150 LICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 234 TRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE V+ + DV++F +L E+ +
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 71/155 (45%), Gaps = 11/155 (7%)
Query: 126 HKHILKLIGCCLETPIPILVF----EYGEYTTL----RDRIFGAPQPHFEPLLLKHRLKV 177
H +++ L+G C + P++V ++G +T R+ + + L L+H +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 178 AMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSR 237
+ +A + +L R + +L + IL +E+NV K+ DF + I + ++
Sbjct: 150 SFQVAKGMEFLAS---RKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 238 FGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE V+ + DV++F +L E+ +
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 74/181 (40%), Gaps = 8/181 (4%)
Query: 93 QERLISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYT 152
+E +++ Y+D + ++ Q DH +I+ L G + +++ EY E
Sbjct: 35 REICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENG 94
Query: 153 TLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEEN 212
+L D F + L L+ GI + YL V +L + IL N
Sbjct: 95 SL-DAFLRKNDGRFTVIQLVGMLR---GIGSGMKYLS---DMSYVHRDLAARNILVNSNL 147
Query: 213 VAKLFDFSESISIPEG-ETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
V K+ DF S + + E TR ++APE F DV+++ V+ E++
Sbjct: 148 VCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 207
Query: 272 T 272
+
Sbjct: 208 S 208
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 15/159 (9%)
Query: 126 HKHILKLIGCCLETPIPILVF----EYGEYTT-LRDR------IFGAPQPHFEPLL-LKH 173
H +++ L+G C + P++V ++G +T LR + AP+ ++ L L+H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 174 RLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHII 233
+ + +A + +L R + +L + IL +E+NV K+ DF + I + +
Sbjct: 141 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 234 TRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE V+ + DV++F +L E+ +
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRF-G 239
I+ AL YLH R I++ +L +L + E KL D+ EG T S F G
Sbjct: 115 ISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYG---MCKEGLRPGDTTSXFCG 168
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQSTRDLLRTHGSVRHLIEYLKNYL 297
Y APE RG + +D + ++ E++ G+S D++ GS + + ++YL
Sbjct: 169 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV---GSSDNPDQNTEDYL 223
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 21/182 (11%)
Query: 97 ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRD 156
I V+K +D+ I++ Q+D+ +I++LIG C + +LV E L
Sbjct: 42 IKVLKQGTEKADTEEMMREAQIMH--QLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHK 98
Query: 157 RIFGA----PQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEEN 212
+ G P + LL H++ + M ++H +L + +L +
Sbjct: 99 FLVGKREEIPVSNVAELL--HQVSMGMKYLEEKNFVHR---------DLAARNVLLVNRH 147
Query: 213 VAKLFDFSESISIPEGETHIITRSRFGAW--TYSAPEYKRGGVFNEKLDVYTFSTVLLEL 270
AK+ DF S ++ +++ RS G W + APE F+ + DV+++ + E
Sbjct: 148 YAKISDFGLSKALGADDSYYTARSA-GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEA 206
Query: 271 LT 272
L+
Sbjct: 207 LS 208
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRF-G 239
I+ AL YLH R I++ +L +L + E KL D+ EG T S F G
Sbjct: 119 ISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYG---MCKEGLRPGDTTSXFCG 172
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQSTRDLLRTHGSVRHLIEYLKNYL 297
Y APE RG + +D + ++ E++ G+S D++ GS + + ++YL
Sbjct: 173 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV---GSSDNPDQNTEDYL 227
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 15/159 (9%)
Query: 126 HKHILKLIGCCLETPIPILVF----EYGEYTT-LRDR------IFGAPQPHFEPLL-LKH 173
H +++ L+G C + P++V ++G +T LR + AP+ ++ L L+H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 174 RLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHII 233
+ + +A + +L R + +L + IL +E+NV K+ DF + I + +
Sbjct: 141 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 234 TRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE V+ + DV++F +L E+ +
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 11/216 (5%)
Query: 62 SAKELEIATNNYDERKFIKQDSTYKLYKGFWQERLISVMKYNESYSDSACKFSINNIVYA 121
S+ + EI + I S +YKG W + M + + + N +
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
+ H +IL +G + + I V ++ E ++L + + FE + L + +A
Sbjct: 64 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH-IIETKFEMIKL---IDIARQT 118
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
A + YLH + I+ +L S I +E+ K+ DF + G+
Sbjct: 119 AQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 175
Query: 242 TYSAPEYKR---GGVFNEKLDVYTFSTVLLELLTGQ 274
+ APE R ++ + DVY F VL EL+TGQ
Sbjct: 176 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 56 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 115
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 116 VQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 167
Query: 201 LISLCILFNEENVAKLFDF--SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF ++ + E E H W A E ++ +
Sbjct: 168 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 225
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 226 DVWSYGVTVWELMT 239
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 37 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 96
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 97 VQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 148
Query: 201 LISLCILFNEENVAKLFDF--SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF ++ + E E H W A E ++ +
Sbjct: 149 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 206
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 207 DVWSYGVTVWELMT 220
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 41 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 100
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 101 VQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 152
Query: 201 LISLCILFNEENVAKLFDF--SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF ++ + E E H W A E ++ +
Sbjct: 153 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 210
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 211 DVWSYGVTVWELMT 224
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 28 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 87
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 88 VQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAEGMNYLE---DRRLVHRD 139
Query: 201 LISLCILFNEENVAKLFDF--SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF ++ + E E H W A E ++ +
Sbjct: 140 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 197
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 198 DVWSYGVTVWELMT 211
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 31 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 91 VQ-LITQLMPFGXLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 142
Query: 201 LISLCILFNEENVAKLFDF--SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF ++ + E E H W A E ++ +
Sbjct: 143 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 200
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 201 DVWSYGVTVWELMT 214
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 38 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 97
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 98 VQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 149
Query: 201 LISLCILFNEENVAKLFDF--SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF ++ + E E H W A E ++ +
Sbjct: 150 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 207
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 208 DVWSYGVTVWELMT 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 31 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 91 VQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 142
Query: 201 LISLCILFNEENVAKLFDF--SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF ++ + E E H W A E ++ +
Sbjct: 143 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 200
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 201 DVWSYGVTVWELMT 214
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 31 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 91 VQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 142
Query: 201 LISLCILFNEENVAKLFDF--SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF ++ + E E H W A E ++ +
Sbjct: 143 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 200
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 201 DVWSYGVTVWELMT 214
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 31 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 91 VQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 142
Query: 201 LISLCILFNEENVAKLFDF--SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF ++ + E E H W A E ++ +
Sbjct: 143 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 200
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 201 DVWSYGVTVWELMT 214
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 29/206 (14%)
Query: 79 IKQDSTYKLYKGFWQ--ERLISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCC 136
+ ++ + +L+KG WQ + ++ V+K + + + F+ H ++L ++G C
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFN-EECPRLRIFSHPNVLPVLGAC 76
Query: 137 LETPI--PILVFEYGEYTTLRDRI-----FGAPQPHFEPLLLKHRLKVAMGIAHALAYLH 189
P P L+ + Y +L + + F Q +K A+ +A +A+LH
Sbjct: 77 QSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQ--------SQAVKFALDMARGMAFLH 128
Query: 190 VGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEY- 248
P I L S ++ +E D + IS+ + + + R A + APE
Sbjct: 129 TLEPL-IPRHALNSRSVMIDE-------DMTARISMADVKFSFQSPGRMYAPAWVAPEAL 180
Query: 249 --KRGGVFNEKLDVYTFSTVLLELLT 272
K D+++F+ +L EL+T
Sbjct: 181 QKKPEDTNRRSADMWSFAVLLWELVT 206
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 25 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 84
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 85 VQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 136
Query: 201 LISLCILFNEENVAKLFDF--SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF ++ + E E H W A E ++ +
Sbjct: 137 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 194
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 195 DVWSYGVTVWELMT 208
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 38 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 97
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 98 VQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 149
Query: 201 LISLCILFNEENVAKLFDF--SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF ++ + E E H W A E ++ +
Sbjct: 150 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 207
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 208 DVWSYGVTVWELMT 221
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 33 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 92
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 93 VQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 144
Query: 201 LISLCILFNEENVAKLFDF--SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF ++ + E E H W A E ++ +
Sbjct: 145 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 202
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 203 DVWSYGVTVWELMT 216
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 34 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 93
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 94 VQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 145
Query: 201 LISLCILFNEENVAKLFDF--SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF ++ + E E H W A E ++ +
Sbjct: 146 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 203
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 204 DVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 34 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 93
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 94 VQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 145
Query: 201 LISLCILFNEENVAKLFDF--SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF ++ + E E H W A E ++ +
Sbjct: 146 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 203
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 204 DVWSYGVTVWELMT 217
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E++ +++ + E+ S A K ++ A +D+ H+ +L+G CL +
Sbjct: 34 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 93
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ L+ + + L D + + H + + ++ L + IA + YL R +V +
Sbjct: 94 VQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 145
Query: 201 LISLCILFNEENVAKLFDF--SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L K+ DF ++ + E E H W A E ++ +
Sbjct: 146 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM--ALESILHRIYTHQS 203
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 204 DVWSYGVTVWELMT 217
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 15/159 (9%)
Query: 126 HKHILKLIGCCLETPIPILVF----EYGEYTT-LRDR------IFGAPQPHFEPLL-LKH 173
H +++ L+G C + P++V ++G +T LR + AP+ ++ L L+H
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 174 RLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHII 233
+ + +A + +L R + +L + IL +E+NV K+ DF + I + +
Sbjct: 150 LICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVR 206
Query: 234 TRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE V+ + DV++F +L E+ +
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 16/181 (8%)
Query: 97 ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRD 156
+++ Y++ + ++ Q DH +I++L G + ++V EY E +L D
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-D 138
Query: 157 RIFGAPQPHFEPLLLKHRLKVAMGIAHALAYL-HVGFPRPIVFGNLISLCILFNEENVAK 215
F + L L+ G+ + YL +G+ V +L + +L + V K
Sbjct: 139 TFLRTHDGQFTIMQLVGMLR---GVGAGMRYLSDLGY----VHRDLAARNVLVDSNLVCK 191
Query: 216 LFDFSESISIPEGETHIITRSRFGA----WTYSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
+ DF S + E + + G WT APE F+ DV++F V+ E+L
Sbjct: 192 VSDFGLS-RVLEDDPDAAXTTTGGKIPIRWT--APEAIAFRTFSSASDVWSFGVVMWEVL 248
Query: 272 T 272
Sbjct: 249 A 249
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 21/169 (12%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIF---GAPQPHFEPLLLKHRLKVAMG 180
+ H ++KL + PI I+ E+ +L D + G+ QP L + +
Sbjct: 67 LQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQP------LPKLIDFSAQ 119
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
IA +A++ R + +L + IL + V K+ DF + I + E ++F
Sbjct: 120 IAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI 176
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-------GQSTRDLLRT 282
++APE G F K DV++F +L+E++T G S +++R
Sbjct: 177 -KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 224
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 14/152 (9%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIF---GAPQPHFEPLLLKHRLKVAMG 180
+ H ++KL + PI I+ E+ +L D + G+ QP L + +
Sbjct: 240 LQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQP------LPKLIDFSAQ 292
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
IA +A++ R + +L + IL + V K+ DF + I + E ++F
Sbjct: 293 IAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI 349
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
++APE G F K DV++F +L+E++T
Sbjct: 350 -KWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 66/158 (41%), Gaps = 13/158 (8%)
Query: 118 IVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRLK 176
I +Q D ++ K G L+ ++ EY + D + P F+ +LK LK
Sbjct: 72 ITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILK 131
Query: 177 VAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRS 236
L YLH + ++ + +L +E+ KL DF + + + T I +
Sbjct: 132 -------GLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNT 179
Query: 237 RFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
G + APE + ++ K D+++ +EL G+
Sbjct: 180 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 68/166 (40%), Gaps = 23/166 (13%)
Query: 126 HKHILKLIGCC-LETPIPILVFEYGEYTTL------------RDRIFGAPQPHFEP---- 168
H++I+ L+G C L PI L+FEY Y L D I Q E
Sbjct: 108 HENIVNLLGACTLSGPI-YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 169 --LLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIP 226
L + L A +A + +L + V +L + +L V K+ DF + I
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 227 EGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+++ + + APE G++ K DV+++ +L E+ +
Sbjct: 224 SDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 178 AMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSR 237
A + AL YLH + I++ +L IL ++ K+ DF + +P+ +T
Sbjct: 112 AAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXL 163
Query: 238 FGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
G Y APE +N+ +D ++F ++ E+L G
Sbjct: 164 CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 73/175 (41%), Gaps = 30/175 (17%)
Query: 108 DSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILV--FEYGEYTTLRDRIFGAPQPH 165
D+ KF ++ V +DH HI+KLIG E P I++ + YGE +R
Sbjct: 51 DNKEKF-MSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERN------- 102
Query: 166 FEPLLLKHRLKV------AMGIAHALAYLHV--GFPRPIVFGNLISLCILFNEENVAKLF 217
K+ LKV ++ I A+AYL R I N IL KL
Sbjct: 103 ------KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRN-----ILVASPECVKLG 151
Query: 218 DFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
DF S I + + + + +R + +PE F DV+ F+ + E+L+
Sbjct: 152 DFGLSRYIEDEDYYKASVTRLPI-KWMSPESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 20/169 (11%)
Query: 113 FSINNIVYAAQMDHKHILKLIGCCLETP---IPILVFEYGEYTTLRDRIFGAPQPHFEPL 169
F + +V A + I+ L G E P I + + E G L ++ P+
Sbjct: 110 FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE------ 163
Query: 170 LLKHRLKVAMGIA-HALAYLHVGFPRPIVFGNLISLCILFNEENV-AKLFDFSESISI-P 226
R +G A L YLH R I+ G++ + +L + + A L DF ++ + P
Sbjct: 164 ---DRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 217
Query: 227 EGETHIITRSRF--GAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
+G + + G T+ APE G + K+D+++ ++L +L G
Sbjct: 218 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 178 AMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSR 237
A I L +LH + IV+ +L IL +++ K+ DF G+ T
Sbjct: 125 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNEF 179
Query: 238 FGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQS 275
G Y APE G +N +D ++F +L E+L GQS
Sbjct: 180 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS 217
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 11/213 (5%)
Query: 65 ELEIATNNYDERKFIKQDSTYKLYKGFWQERLISVMKYNESYSDSACKFSINNIVYAAQM 124
+ EI + I S +YKG W + M + + + N + +
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 125 DHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHA 184
H +IL +G + + I V ++ E ++L + + FE + L + +A A
Sbjct: 62 RHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH-IIETKFEMIKL---IDIARQTAQG 116
Query: 185 LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYS 244
+ YLH + I+ +L S I +E+ K+ DF + G+ +
Sbjct: 117 MDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 173
Query: 245 APEYKR---GGVFNEKLDVYTFSTVLLELLTGQ 274
APE R ++ + DVY F VL EL+TGQ
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 73/175 (41%), Gaps = 30/175 (17%)
Query: 108 DSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILV--FEYGEYTTLRDRIFGAPQPH 165
D+ KF ++ V +DH HI+KLIG E P I++ + YGE +R
Sbjct: 67 DNKEKF-MSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERN------- 118
Query: 166 FEPLLLKHRLKV------AMGIAHALAYLHV--GFPRPIVFGNLISLCILFNEENVAKLF 217
K+ LKV ++ I A+AYL R I N IL KL
Sbjct: 119 ------KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRN-----ILVASPECVKLG 167
Query: 218 DFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
DF S I + + + + +R + +PE F DV+ F+ + E+L+
Sbjct: 168 DFGLSRYIEDEDYYKASVTRLPI-KWMSPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 73/175 (41%), Gaps = 30/175 (17%)
Query: 108 DSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILV--FEYGEYTTLRDRIFGAPQPH 165
D+ KF ++ V +DH HI+KLIG E P I++ + YGE +R
Sbjct: 55 DNKEKF-MSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERN------- 106
Query: 166 FEPLLLKHRLKV------AMGIAHALAYLHV--GFPRPIVFGNLISLCILFNEENVAKLF 217
K+ LKV ++ I A+AYL R I N IL KL
Sbjct: 107 ------KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRN-----ILVASPECVKLG 155
Query: 218 DFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
DF S I + + + + +R + +PE F DV+ F+ + E+L+
Sbjct: 156 DFGLSRYIEDEDYYKASVTRLPI-KWMSPESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 20/169 (11%)
Query: 113 FSINNIVYAAQMDHKHILKLIGCCLETP---IPILVFEYGEYTTLRDRIFGAPQPHFEPL 169
F + +V A + I+ L G E P I + + E G L ++ P+
Sbjct: 96 FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE------ 149
Query: 170 LLKHRLKVAMGIA-HALAYLHVGFPRPIVFGNLISLCILFNEENV-AKLFDFSESISI-P 226
R +G A L YLH R I+ G++ + +L + + A L DF ++ + P
Sbjct: 150 ---DRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203
Query: 227 EGETHIITRSRF--GAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
+G + + G T+ APE G + K+D+++ ++L +L G
Sbjct: 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 178 AMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSR 237
A I L +LH + IV+ +L IL +++ K+ DF G+ T
Sbjct: 124 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNXF 178
Query: 238 FGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQS 275
G Y APE G +N +D ++F +L E+L GQS
Sbjct: 179 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS 216
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 20/169 (11%)
Query: 113 FSINNIVYAAQMDHKHILKLIGCCLETP---IPILVFEYGEYTTLRDRIFGAPQPHFEPL 169
F + +V A + I+ L G E P I + + E G L ++ P+
Sbjct: 112 FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE------ 165
Query: 170 LLKHRLKVAMGIA-HALAYLHVGFPRPIVFGNLISLCILFNEENV-AKLFDFSESISI-P 226
R +G A L YLH R I+ G++ + +L + + A L DF ++ + P
Sbjct: 166 ---DRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 219
Query: 227 EGETHIITRSRF--GAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
+G + + G T+ APE G + K+D+++ ++L +L G
Sbjct: 220 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 77/186 (41%), Gaps = 26/186 (13%)
Query: 97 ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRD 156
+++ Y++ + ++ Q DH +I++L G + ++V EY E +L D
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-D 138
Query: 157 RIFGAPQPHFEPLLLKHRLKVAMGIAHALAYL-HVGFPRPIVFGNLISLCILFNEENVAK 215
F + L L+ G+ + YL +G+ V +L + +L + V K
Sbjct: 139 TFLRTHDGQFTIMQLVGMLR---GVGAGMRYLSDLGY----VHRDLAARNVLVDSNLVCK 191
Query: 216 LFDFSESISIPEGETHIITRSRFGAWT---------YSAPEYKRGGVFNEKLDVYTFSTV 266
+ DF G + ++ A+T ++APE F+ DV++F V
Sbjct: 192 VSDF--------GLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVV 243
Query: 267 LLELLT 272
+ E+L
Sbjct: 244 MWEVLA 249
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 11/213 (5%)
Query: 65 ELEIATNNYDERKFIKQDSTYKLYKGFWQERLISVMKYNESYSDSACKFSINNIVYAAQM 124
+ EI + I S +YKG W + M + + + N + +
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 125 DHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHA 184
H +IL +G + + I V ++ E ++L + + FE + L + +A A
Sbjct: 62 RHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH-IIETKFEMIKL---IDIARQTAQG 116
Query: 185 LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYS 244
+ YLH + I+ +L S I +E+ K+ DF + G+ +
Sbjct: 117 MDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 245 APEYKR---GGVFNEKLDVYTFSTVLLELLTGQ 274
APE R ++ + DVY F VL EL+TGQ
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 62/150 (41%), Gaps = 13/150 (8%)
Query: 144 LVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLIS 203
LV EY LRD + Q H L L + I + YL R V +L +
Sbjct: 90 LVMEYLPSGCLRDFL----QRHRARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAA 142
Query: 204 LCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWT-YSAPEYKRGGVFNEKLDVYT 262
IL E K+ DF + +P + + + R + + APE +F+ + DV++
Sbjct: 143 RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 202
Query: 263 FSTVLLELLT-----GQSTRDLLRTHGSVR 287
F VL EL T + + LR GS R
Sbjct: 203 FGVVLYELFTYCDKSCSPSAEFLRMMGSER 232
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 12/152 (7%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
Q+D+ +I+++IG C E +LV E E L + H + K+ +++ ++
Sbjct: 64 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD---KNIIELVHQVS 117
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW- 241
+ YL V +L + +L ++ AK+ DF S ++ E + ++ G W
Sbjct: 118 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH-GKWP 173
Query: 242 -TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE F+ K DV++F ++ E +
Sbjct: 174 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 13/192 (6%)
Query: 87 LYKGFWQERL-ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILV 145
+YKG W + + ++K + + F N + + H +IL +G + + I V
Sbjct: 52 VYKGKWHGDVAVKILKVVDPTPEQFQAFR-NEVAVLRKTRHVNILLFMGYMTKDNLAI-V 109
Query: 146 FEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLC 205
++ E ++L + + F+ L + +A A + YLH + I+ ++ S
Sbjct: 110 TQWCEGSSLYKHLH-VQETKFQMFQL---IDIARQTAQGMDYLHA---KNIIHRDMKSNN 162
Query: 206 ILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKR---GGVFNEKLDVYT 262
I +E K+ DF + G+ + APE R F+ + DVY+
Sbjct: 163 IFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYS 222
Query: 263 FSTVLLELLTGQ 274
+ VL EL+TG+
Sbjct: 223 YGIVLYELMTGE 234
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 12/152 (7%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
Q+D+ +I+++IG C E +LV E E L + H + K+ +++ ++
Sbjct: 62 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD---KNIIELVHQVS 115
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW- 241
+ YL V +L + +L ++ AK+ DF S ++ E + ++ G W
Sbjct: 116 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH-GKWP 171
Query: 242 -TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE F+ K DV++F ++ E +
Sbjct: 172 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 11/213 (5%)
Query: 65 ELEIATNNYDERKFIKQDSTYKLYKGFWQERLISVMKYNESYSDSACKFSINNIVYAAQM 124
+ EI + I S +YKG W + M + + + N + +
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 125 DHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHA 184
H +IL +G P +V ++ E ++L + + FE + L + +A A
Sbjct: 62 RHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLH-IIETKFEMIKL---IDIARQTAQG 116
Query: 185 LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYS 244
+ YLH + I+ +L S I +E+ K+ DF + G+ +
Sbjct: 117 MDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 245 APEYKR---GGVFNEKLDVYTFSTVLLELLTGQ 274
APE R ++ + DVY F VL EL+TGQ
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 126 HKHILKLIGCCLETP-IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHA 184
H ++L L+G CL + P++V Y ++ LR+ I L+ L+VA G+ +
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 149
Query: 185 LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA---W 241
+ + V +L + + +E+ K+ DF + + + E + + ++ GA
Sbjct: 150 AS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV-HNKTGAKLPV 201
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ A E + F K DV++F +L EL+T
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 126 HKHILKLIGCCLETP-IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHA 184
H ++L L+G CL + P++V Y ++ LR+ I L+ L+VA G+ +
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 149
Query: 185 LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA---W 241
+ + V +L + + +E+ K+ DF + + + E + + ++ GA
Sbjct: 150 AS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV-HNKTGAKLPV 201
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ A E + F K DV++F +L EL+T
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 10/150 (6%)
Query: 126 HKHILKLIGCCLETPIP--ILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAH 183
H++I+K G C E L+ E+ +L++ + P+ + + LK +LK A+ I
Sbjct: 82 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PK-NKNKINLKQQLKYAVQICK 137
Query: 184 ALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIP-EGETHIITRSRFGAWT 242
+ YL R V +L + +L E+ K+ DF + +I + E + R
Sbjct: 138 GMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF 194
Query: 243 YSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE F DV++F L ELLT
Sbjct: 195 WYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 126 HKHILKLIGCCLETP-IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHA 184
H ++L L+G CL + P++V Y ++ LR+ I L+ L+VA G+ +
Sbjct: 89 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 148
Query: 185 LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA---W 241
+ + V +L + + +E+ K+ DF + + + E + + ++ GA
Sbjct: 149 AS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV-HNKTGAKLPV 200
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ A E + F K DV++F +L EL+T
Sbjct: 201 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 10/150 (6%)
Query: 126 HKHILKLIGCCLETPIP--ILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAH 183
H++I+K G C E L+ E+ +L++ + P+ + + LK +LK A+ I
Sbjct: 70 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PK-NKNKINLKQQLKYAVQICK 125
Query: 184 ALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIP-EGETHIITRSRFGAWT 242
+ YL R V +L + +L E+ K+ DF + +I + E + R
Sbjct: 126 GMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF 182
Query: 243 YSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE F DV++F L ELLT
Sbjct: 183 WYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 12/152 (7%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
Q+D+ +I+++IG C E +LV E E L + H + K+ +++ ++
Sbjct: 68 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD---KNIIELVHQVS 121
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW- 241
+ YL V +L + +L ++ AK+ DF S ++ E + ++ G W
Sbjct: 122 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH-GKWP 177
Query: 242 -TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE F+ K DV++F ++ E +
Sbjct: 178 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 12/152 (7%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
Q+D+ +I+++IG C E +LV E E L + H + K+ +++ ++
Sbjct: 74 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD---KNIIELVHQVS 127
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW- 241
+ YL V +L + +L ++ AK+ DF S ++ E + ++ G W
Sbjct: 128 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH-GKWP 183
Query: 242 -TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE F+ K DV++F ++ E +
Sbjct: 184 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 126 HKHILKLIGCCLETP-IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHA 184
H ++L L+G CL + P++V Y ++ LR+ I L+ L+VA G+ +
Sbjct: 88 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 147
Query: 185 LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA---W 241
+ + V +L + + +E+ K+ DF + + + E + + ++ GA
Sbjct: 148 AS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV-HNKTGAKLPV 199
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ A E + F K DV++F +L EL+T
Sbjct: 200 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 126 HKHILKLIGCCLETP-IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHA 184
H ++L L+G CL + P++V Y ++ LR+ I L+ L+VA G+ +
Sbjct: 85 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 144
Query: 185 LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA---W 241
+ + V +L + + +E+ K+ DF + + + E + + ++ GA
Sbjct: 145 AS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV-HNKTGAKLPV 196
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ A E + F K DV++F +L EL+T
Sbjct: 197 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 126 HKHILKLIGCCLETP-IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHA 184
H ++L L+G CL + P++V Y ++ LR+ I L+ L+VA G+ +
Sbjct: 108 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 167
Query: 185 LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA---W 241
+ + V +L + + +E+ K+ DF + + + E + + ++ GA
Sbjct: 168 AS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV-HNKTGAKLPV 219
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ A E + F K DV++F +L EL+T
Sbjct: 220 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 126 HKHILKLIGCCLETP-IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHA 184
H ++L L+G CL + P++V Y ++ LR+ I L+ L+VA G+ +
Sbjct: 82 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 141
Query: 185 LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA---W 241
+ + V +L + + +E+ K+ DF + + + E + + ++ GA
Sbjct: 142 AS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV-HNKTGAKLPV 193
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ A E + F K DV++F +L EL+T
Sbjct: 194 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 126 HKHILKLIGCCLETP-IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHA 184
H ++L L+G CL + P++V Y ++ LR+ I L+ L+VA G+ +
Sbjct: 87 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 146
Query: 185 LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA---W 241
+ + V +L + + +E+ K+ DF + + + E + + ++ GA
Sbjct: 147 AS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV-HNKTGAKLPV 198
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ A E + F K DV++F +L EL+T
Sbjct: 199 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 126 HKHILKLIGCCLETP-IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHA 184
H ++L L+G CL + P++V Y ++ LR+ I L+ L+VA G+ +
Sbjct: 109 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 168
Query: 185 LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA---W 241
+ + V +L + + +E+ K+ DF + + + E + + ++ GA
Sbjct: 169 AS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV-HNKTGAKLPV 220
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ A E + F K DV++F +L EL+T
Sbjct: 221 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 81/208 (38%), Gaps = 40/208 (19%)
Query: 116 NNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRL 175
N I +DH +I+KL + LV E+ E L FE ++ +H+
Sbjct: 95 NEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL-----------FEQIINRHKF 143
Query: 176 ------KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENV---AKLFDFSESISIP 226
+ I + YLH IV ++ IL +N K+ DF S
Sbjct: 144 DECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS 200
Query: 227 EGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT------GQSTRDLL 280
+ R R G Y APE + +NEK DV++ ++ LL GQ+ +D++
Sbjct: 201 KDYK---LRDRLGTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDII 256
Query: 281 RTHGSVRHLIEYLKNYLQNNRFTEIADP 308
+ +E K Y N + I+D
Sbjct: 257 KK-------VEKGKYYFDFNDWKNISDE 277
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 167 EPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIP 226
EP+ ++ + + +A + +L R + +L + IL +E NV K+ DF + I
Sbjct: 194 EPITMEDLISYSFQVARGMEFLSS---RKCIHRDLAARNILLSENNVVKICDFGLARDIY 250
Query: 227 EGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ ++ + APE +++ K DV+++ +L E+ +
Sbjct: 251 KNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 72/155 (46%), Gaps = 13/155 (8%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
Q+D+ +I+++IG C E +LV E E L + H + K+ +++ ++
Sbjct: 84 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD---KNIIELVHQVS 137
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW- 241
+ YL V +L + +L ++ AK+ DF S ++ E + ++ G W
Sbjct: 138 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH-GKWP 193
Query: 242 -TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-GQ 274
+ APE F+ K DV++F ++ E + GQ
Sbjct: 194 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQ 228
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 72/155 (46%), Gaps = 13/155 (8%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
Q+D+ +I+++IG C E +LV E E L + H + K+ +++ ++
Sbjct: 84 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD---KNIIELVHQVS 137
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW- 241
+ YL V +L + +L ++ AK+ DF S ++ E + ++ G W
Sbjct: 138 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH-GKWP 193
Query: 242 -TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-GQ 274
+ APE F+ K DV++F ++ E + GQ
Sbjct: 194 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQ 228
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 12/151 (7%)
Query: 126 HKHILKLIGCCLETP-IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHA 184
H ++L L+G CL + P++V Y ++ LR+ I L+ L+VA G+ +
Sbjct: 89 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 148
Query: 185 LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA---W 241
+ + V +L + + +E+ K+ DF + + + E + ++ GA
Sbjct: 149 AS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSV-HNKTGAKLPV 200
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ A E + F K DV++F +L EL+T
Sbjct: 201 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 12/114 (10%)
Query: 177 VAMGIAHALAYLHVGFP------RP-IVFGNLISLCILFNEENVAKLFDFSESISIPEGE 229
+A +A LAYLH P +P I ++ S +L A + DF ++ G+
Sbjct: 126 IAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGK 185
Query: 230 THIITRSRFGAWTYSAPEYKRGGVFNE-----KLDVYTFSTVLLELLTGQSTRD 278
+ T + G Y APE G + + ++D+Y VL EL + + D
Sbjct: 186 SAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 12/152 (7%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
Q+D+ +I+++IG C E +LV E E L + H + K+ +++ ++
Sbjct: 82 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD---KNIIELVHQVS 135
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW- 241
+ YL V +L + +L ++ AK+ DF S ++ E + ++ G W
Sbjct: 136 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH-GKWP 191
Query: 242 -TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE F+ K DV++F ++ E +
Sbjct: 192 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 78/188 (41%), Gaps = 32/188 (17%)
Query: 120 YAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHR--LKV 177
YAA ++ ++ +K + + EY E TL D I H E L + ++
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLI------HSENLNQQRDEYWRL 121
Query: 178 AMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFS--------------ESI 223
I AL+Y+H + I+ NL I +E K+ DF +S
Sbjct: 122 FRQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 224 SIPEGETHIITRSRFGAWTYSAPEYKRG-GVFNEKLDVYTFSTVLLELL----TGQSTRD 278
++P G + +T S G Y A E G G +NEK+D Y+ + E + TG +
Sbjct: 179 NLP-GSSDNLT-SAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTGXERVN 236
Query: 279 LLRTHGSV 286
+L+ SV
Sbjct: 237 ILKKLRSV 244
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Query: 144 LVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLIS 203
LV EY LRD + Q H L L + I + YL R V +L +
Sbjct: 103 LVMEYLPSGCLRDFL----QRHRARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAA 155
Query: 204 LCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWT-YSAPEYKRGGVFNEKLDVYT 262
IL E K+ DF + +P + + + R + + APE +F+ + DV++
Sbjct: 156 RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 215
Query: 263 FSTVLLELLT 272
F VL EL T
Sbjct: 216 FGVVLYELFT 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Query: 144 LVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLIS 203
LV EY LRD + Q H L L + I + YL R V +L +
Sbjct: 91 LVMEYLPSGCLRDFL----QRHRARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAA 143
Query: 204 LCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWT-YSAPEYKRGGVFNEKLDVYT 262
IL E K+ DF + +P + + + R + + APE +F+ + DV++
Sbjct: 144 RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 203
Query: 263 FSTVLLELLT 272
F VL EL T
Sbjct: 204 FGVVLYELFT 213
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 9/153 (5%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHF--EPLLLKHRLKVAMGI 181
+ H HI++L+ + +VFE+ + L I F + H ++ I
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR---QI 139
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILF-NEENVAKLFDFSESISIPEGETHIITRSRFGA 240
AL Y H I+ ++ C+L ++EN A + ++I GE+ ++ R G
Sbjct: 140 LEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGT 196
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
+ APE + + + +DV+ +L LL+G
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 71/165 (43%), Gaps = 21/165 (12%)
Query: 126 HKHILKLIGCCLETPIPILVFEYGEYTTL-------RDRIFG---APQPHFE-------- 167
H++I+ L+G C +++ EY Y L + + G AP E
Sbjct: 94 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGR 153
Query: 168 PLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPE 227
PL L+ L + +A +A+L + + ++ + +L +VAK+ DF + I
Sbjct: 154 PLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 210
Query: 228 GETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+I+ + + APE V+ + DV+++ +L E+ +
Sbjct: 211 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 73/176 (41%), Gaps = 25/176 (14%)
Query: 107 SDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPIL-VFEYGEYTTL-----RDRIFG 160
D C + I+ A+ +H + +L CC +TP + V E+ L + R F
Sbjct: 65 DDVECTMTEKRILSLAR-NHPFLTQLF-CCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD 122
Query: 161 APQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFS 220
+ F A I AL +LH + I++ +L +L + E KL DF
Sbjct: 123 EARARF----------YAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFG 169
Query: 221 ESISIPEGETHIITRSRF-GAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQS 275
EG + +T + F G Y APE + ++ +D + +L E+L G +
Sbjct: 170 ---MCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHA 222
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 9/153 (5%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHF--EPLLLKHRLKVAMGI 181
+ H HI++L+ + +VFE+ + L I F + H ++ I
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR---QI 141
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILF-NEENVAKLFDFSESISIPEGETHIITRSRFGA 240
AL Y H I+ ++ C+L ++EN A + ++I GE+ ++ R G
Sbjct: 142 LEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGT 198
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
+ APE + + + +DV+ +L LL+G
Sbjct: 199 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 8/130 (6%)
Query: 144 LVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLIS 203
LV EY LRD + Q H L L + I + YL R V +L +
Sbjct: 87 LVMEYLPSGCLRDFL----QRHRARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAA 139
Query: 204 LCILFNEENVAKLFDFSESISIP-EGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYT 262
IL E K+ DF + +P + + ++ + APE +F+ + DV++
Sbjct: 140 RNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 199
Query: 263 FSTVLLELLT 272
F VL EL T
Sbjct: 200 FGVVLYELFT 209
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 206 ILFNEENVA--KLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTF 263
+L ++EN A KL DF +I + GE+ ++ R G + APE + + + +DV+
Sbjct: 162 LLASKENSAPVKLGDFGVAIQL--GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGC 219
Query: 264 STVLLELLTG 273
+L LL+G
Sbjct: 220 GVILFILLSG 229
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 12/152 (7%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
Q+D+ +I+++IG C E +LV E E L + H + K+ +++ ++
Sbjct: 68 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD---KNIIELVHQVS 121
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW- 241
+ YL V +L + +L ++ AK+ DF S ++ E ++ G W
Sbjct: 122 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTH-GKWP 177
Query: 242 -TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE F+ K DV++F ++ E +
Sbjct: 178 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 14/155 (9%)
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGI 181
Q H +I++L G + +++ EY E L D+ F L L L+ GI
Sbjct: 101 GQFSHHNIIRLEGVISKYKPMMIITEYMENGAL-DKFLREKDGEFSVLQLVGMLR---GI 156
Query: 182 AHALAYL-HVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
A + YL ++ + V +L + IL N V K+ DF S + + T S
Sbjct: 157 AAGMKYLANMNY----VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI 212
Query: 241 ---WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
WT APE F DV++F V+ E++T
Sbjct: 213 PIRWT--APEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 118 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC----GT 170
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 169 LLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEG 228
+LL + + IA +AY+ + + +L + +L +E + K+ DF + I +
Sbjct: 107 VLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 163
Query: 229 ETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
E ++F ++APE G F K DV++F +L E++T
Sbjct: 164 EYTAREGAKFPI-KWTAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 126 HKHILKLIGCCLETPIPILVFEYGEYTTL------RDRIFGAPQPHF----EPLLLKHRL 175
H++I+ L+G C +++ EY Y L + R+ P F L + L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVL-ETDPAFAIANSTLSTRDLL 167
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
+ +A +A+L + + ++ + +L +VAK+ DF + I +I+
Sbjct: 168 HFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ + APE V+ + DV+++ +L E+ +
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 122 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLX----GT 174
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 119 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GT 171
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 69/158 (43%), Gaps = 14/158 (8%)
Query: 126 HKHILKLIGCCLETPIPILVFEYGEYTTL-----RDRIFG---APQPHFEP---LLLKHR 174
H++I+ L+G C +++ EY Y L R R G + P P L +
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDL 168
Query: 175 LKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIIT 234
L + +A +A+L + + ++ + +L +VAK+ DF + I +I+
Sbjct: 169 LHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 225
Query: 235 RSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ + APE V+ + DV+++ +L E+ +
Sbjct: 226 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 117 LANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GT 169
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GT 172
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 126 HKHILKLIGCCLETP-IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHA 184
H ++L L+G CL + P++V Y ++ LR+ I L+ L+VA G+
Sbjct: 88 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 147
Query: 185 LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGE---THIITRSRFGAW 241
+ + V +L + + +E+ K+ DF + + + E H T ++
Sbjct: 148 AS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV- 199
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ A E + F K DV++F +L EL+T
Sbjct: 200 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 122 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GT 174
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 143 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GT 195
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 134 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GT 186
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 187 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GT 174
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 126 HKHILKLIGCCLETP-IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHA 184
H ++L L+G CL + P++V Y ++ LR+ I L+ L+VA G+
Sbjct: 91 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 150
Query: 185 LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGE---THIITRSRFGAW 241
+ + V +L + + +E+ K+ DF + + + E H T ++
Sbjct: 151 AS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV- 202
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ A E + F K DV++F +L EL+T
Sbjct: 203 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 13/109 (11%)
Query: 177 VAMGIAHALAYLHVGFP-------RP-IVFGNLISLCILFNEENVAKLFDFSESISIPEG 228
VA ++ L+YLH P +P I + S +L + A L DF ++ G
Sbjct: 117 VAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPG 176
Query: 229 ETHIITRSRFGAWTYSAPEYKRGGVFNE-----KLDVYTFSTVLLELLT 272
+ T + G Y APE G + + ++D+Y VL EL++
Sbjct: 177 KPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 126 HKHILKLIGCCLETP-IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHA 184
H ++L L+G CL + P++V Y ++ LR+ I L+ L+VA G+
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 149
Query: 185 LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGE---THIITRSRFGAW 241
+ + V +L + + +E+ K+ DF + + + E H T ++
Sbjct: 150 AS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV- 201
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ A E + F K DV++F +L EL+T
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 206 ILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGV-FNEKLDVYTFS 264
+L + V KL DF + + GE ++ S + Y APE G + +DV++
Sbjct: 154 LLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAG 210
Query: 265 TVLLELLTGQSTRDLLRTHGSVRHLIEYLK 294
VL ELL GQ + V L+E +K
Sbjct: 211 CVLAELLLGQP---IFPGDSGVDQLVEIIK 237
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 126 HKHILKLIGCCLETP-IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHA 184
H ++L L+G CL + P++V Y ++ LR+ I L+ L+VA G+
Sbjct: 91 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 150
Query: 185 LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGE---THIITRSRFGAW 241
+ + V +L + + +E+ K+ DF + + + E H T ++
Sbjct: 151 AS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPV- 202
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ A E + F K DV++F +L EL+T
Sbjct: 203 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GT 172
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 206 ILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGV-FNEKLDVYTFS 264
+L + V KL DF + + GE ++ S + Y APE G + +DV++
Sbjct: 154 LLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAG 210
Query: 265 TVLLELLTGQSTRDLLRTHGSVRHLIEYLK 294
VL ELL GQ + V L+E +K
Sbjct: 211 CVLAELLLGQP---IFPGDSGVDQLVEIIK 237
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 206 ILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGV-FNEKLDVYTFS 264
+L + V KL DF + + GE ++ S + Y APE G + +DV++
Sbjct: 154 LLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAG 210
Query: 265 TVLLELLTGQSTRDLLRTHGSVRHLIEYLK 294
VL ELL GQ + V L+E +K
Sbjct: 211 CVLAELLLGQP---IFPGDSGVDQLVEIIK 237
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GT 172
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 117 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GT 169
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 206 ILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGV-FNEKLDVYTFS 264
+L + V KL DF + + GE ++ S + Y APE G + +DV++
Sbjct: 173 LLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAG 229
Query: 265 TVLLELLTGQSTRDLLRTHGSVRHLIEYLK 294
VL ELL GQ + V L+E +K
Sbjct: 230 CVLAELLLGQP---IFPGDSGVDQLVEIIK 256
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 206 ILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGV-FNEKLDVYTFS 264
+L + V KL DF + + GE ++ S + Y APE G + +DV++
Sbjct: 154 LLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAG 210
Query: 265 TVLLELLTGQSTRDLLRTHGSVRHLIEYLK 294
VL ELL GQ + V L+E +K
Sbjct: 211 CVLAELLLGQP---IFPGDSGVDQLVEIIK 237
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 121 LANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC----GT 173
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
Y PE G + +EK+D+++ + E L G
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 206 ILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGV-FNEKLDVYTFS 264
+L + V KL DF + + GE ++ S + Y APE G + +DV++
Sbjct: 162 LLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAG 218
Query: 265 TVLLELLTGQSTRDLLRTHGSVRHLIEYLK 294
VL ELL GQ + V L+E +K
Sbjct: 219 CVLAELLLGQP---IFPGDSGVDQLVEIIK 245
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 206 ILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGV-FNEKLDVYTFS 264
+L + V KL DF + + GE ++ S + Y APE G + +DV++
Sbjct: 166 LLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAG 222
Query: 265 TVLLELLTGQSTRDLLRTHGSVRHLIEYLK 294
VL ELL GQ + V L+E +K
Sbjct: 223 CVLAELLLGQP---IFPGDSGVDQLVEIIK 249
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 206 ILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGV-FNEKLDVYTFS 264
+L + V KL DF + + GE ++ S + Y APE G + +DV++
Sbjct: 158 LLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAG 214
Query: 265 TVLLELLTGQSTRDLLRTHGSVRHLIEYLK 294
VL ELL GQ + V L+E +K
Sbjct: 215 CVLAELLLGQP---IFPGDSGVDQLVEIIK 241
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 206 ILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGV-FNEKLDVYTFS 264
+L + V KL DF + + GE ++ S + Y APE G + +DV++
Sbjct: 188 LLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAG 244
Query: 265 TVLLELLTGQSTRDLLRTHGSVRHLIEYLK 294
VL ELL GQ + V L+E +K
Sbjct: 245 CVLAELLLGQP---IFPGDSGVDQLVEIIK 271
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 206 ILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGV-FNEKLDVYTFS 264
+L + V KL DF + + GE ++ S + Y APE G + +DV++
Sbjct: 155 LLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAG 211
Query: 265 TVLLELLTGQSTRDLLRTHGSVRHLIEYLK 294
VL ELL GQ + V L+E +K
Sbjct: 212 CVLAELLLGQP---IFPGDSGVDQLVEIIK 238
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 206 ILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGV-FNEKLDVYTFS 264
+L + V KL DF + + GE ++ S + Y APE G + +DV++
Sbjct: 166 LLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAG 222
Query: 265 TVLLELLTGQSTRDLLRTHGSVRHLIEYLK 294
VL ELL GQ + V L+E +K
Sbjct: 223 CVLAELLLGQP---IFPGDSGVDQLVEIIK 249
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Query: 113 FSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLK 172
F ++ A + I+ L G E P + E E +L + + L +
Sbjct: 131 FRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV------KEQGCLPE 184
Query: 173 HRLKVAMGIA-HALAYLHVGFPRPIVFGNLISLCILFNEENV-AKLFDFSESISI-PEGE 229
R +G A L YLH R I+ G++ + +L + + A L DF ++ + P+G
Sbjct: 185 DRALYYLGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGL 241
Query: 230 THIITRSRF--GAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
+ + G T+ APE G + K+DV++ ++L +L G
Sbjct: 242 GKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 143 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GT 195
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 126 HKHILKLIGCCLETP-IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHA 184
H ++L L+G CL + P++V Y ++ LR+ I L+ L+VA G+
Sbjct: 95 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 154
Query: 185 LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGE---THIITRSRFGAW 241
+ + V +L + + +E+ K+ DF + + + E H T ++
Sbjct: 155 AS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV- 206
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ A E + F K DV++F +L EL+T
Sbjct: 207 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GT 172
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GT 169
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 116 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GT 168
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 169 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 126 HKHILKLIGCCLETP-IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHA 184
H ++L L+G CL + P++V Y ++ LR+ I L+ L+VA G+
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 149
Query: 185 LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGE---THIITRSRFGAW 241
+ + V +L + + +E+ K+ DF + + + E H T ++
Sbjct: 150 AS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV- 201
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ A E + F K DV++F +L EL+T
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GT 169
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLL-LKHRLKVAMGI 181
Q+D+ +I+++IG C E +LV E E L + + ++ L H++ + M
Sbjct: 426 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 484
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
++H +L + +L ++ AK+ DF S ++ E + ++ G W
Sbjct: 485 LEESNFVHR---------DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH-GKW 534
Query: 242 --TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE F+ K DV++F ++ E +
Sbjct: 535 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 114 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GT 166
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 167 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Query: 113 FSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLK 172
F ++ A + I+ L G E P + E E +L + + L +
Sbjct: 112 FRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV------KEQGCLPE 165
Query: 173 HRLKVAMGIA-HALAYLHVGFPRPIVFGNLISLCILFNEENV-AKLFDFSESISI-PEGE 229
R +G A L YLH R I+ G++ + +L + + A L DF ++ + P+G
Sbjct: 166 DRALYYLGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGL 222
Query: 230 THIITRSRF--GAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
+ + G T+ APE G + K+DV++ ++L +L G
Sbjct: 223 GKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 34.7 bits (78), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 121 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GT 173
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 34.7 bits (78), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 123 QMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLL-LKHRLKVAMGI 181
Q+D+ +I+++IG C E +LV E E L + + ++ L H++ + M
Sbjct: 427 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 485
Query: 182 AHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAW 241
++H +L + +L ++ AK+ DF S ++ E + ++ G W
Sbjct: 486 LEESNFVHR---------DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH-GKW 535
Query: 242 --TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ APE F+ K DV++F ++ E +
Sbjct: 536 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 76/180 (42%), Gaps = 21/180 (11%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHR------LKV 177
+ H+ +++L G C + ++ EY L + + ++HR L++
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL----------REMRHRFQTQQLLEM 125
Query: 178 AMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSR 237
+ A+ YL + + +L + L N++ V K+ DF S + + E S+
Sbjct: 126 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSK 182
Query: 238 FGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-GQSTRDLLRTHGSVRHLIEYLKNY 296
F +S PE F+ K D++ F ++ E+ + G+ + + H+ + L+ Y
Sbjct: 183 FPV-RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY 241
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLC----GT 169
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 21/159 (13%)
Query: 126 HKHILKLIGCCLET-----PIPILVFEYGEYTTLRDRIFGA---PQPHFEPL--LLKHRL 175
H ++++L+G C+E P P+++ + +Y L + + P PL LLK +
Sbjct: 95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMV 154
Query: 176 KVAMGIAHA--LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHII 233
+A+G+ + +LH R + N C+L ++ V + DF S I G+ +
Sbjct: 155 DIALGMEYLSNRNFLH----RDLAARN----CMLRDDMTVC-VADFGLSKKIYSGDYYRQ 205
Query: 234 TRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
R + A E V+ K DV+ F + E+ T
Sbjct: 206 GRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSE-SISIPEGETHIITRSRFG 239
I+ AL +LH + I++ +L I+ N + KL DF SI +G +T + G
Sbjct: 130 ISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG---TVTHTFCG 183
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
Y APE N +D ++ ++ ++LTG
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 126 HKHILKLIGCCLETP-IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHA 184
H ++L L+G CL + P++V Y ++ LR+ I L+ L+VA G+
Sbjct: 149 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 208
Query: 185 LAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGE---THIITRSRFGAW 241
+ + V +L + + +E+ K+ DF + + + E H T ++
Sbjct: 209 AS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV- 260
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ A E + F K DV++F +L EL+T
Sbjct: 261 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 76/180 (42%), Gaps = 21/180 (11%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHR------LKV 177
+ H+ +++L G C + ++ EY L + + ++HR L++
Sbjct: 60 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------MRHRFQTQQLLEM 109
Query: 178 AMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSR 237
+ A+ YL + + +L + L N++ V K+ DF S + + E S+
Sbjct: 110 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 166
Query: 238 FGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-GQSTRDLLRTHGSVRHLIEYLKNY 296
F +S PE F+ K D++ F ++ E+ + G+ + + H+ + L+ Y
Sbjct: 167 FPV-RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY 225
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 120 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GT 172
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 121 LANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLC----GT 173
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
Y PE G + +EK+D+++ + E L G
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 206 ILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGV-FNEKLDVYTFS 264
+L + V KL DF + + GE ++ S + Y APE G + +DV++
Sbjct: 154 LLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAG 210
Query: 265 TVLLELLTGQSTRDLLRTHGSVRHLIEYLK 294
VL ELL GQ + V L+E +K
Sbjct: 211 CVLAELLLGQP---IFPGDSGVDQLVEIIK 237
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 206 ILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGV-FNEKLDVYTFS 264
+L + V KL DF + + GE ++ S + Y APE G + +DV++
Sbjct: 154 LLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAG 210
Query: 265 TVLLELLTGQSTRDLLRTHGSVRHLIEYLK 294
VL ELL GQ + V L+E +K
Sbjct: 211 CVLAELLLGQP---IFPGDSGVDQLVEIIK 237
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 206 ILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGV-FNEKLDVYTFS 264
+L + V KL DF + + GE ++ S + Y APE G + +DV++
Sbjct: 159 LLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAG 215
Query: 265 TVLLELLTGQSTRDLLRTHGSVRHLIEYLK 294
VL ELL GQ + V L+E +K
Sbjct: 216 CVLAELLLGQP---IFPGDSGVDQLVEIIK 242
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 161 APQPHFEPLL-LKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDF 219
AP+ ++ L L+H + + +A + +L R + +L + IL +E+NV K+ DF
Sbjct: 179 APEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDF 235
Query: 220 SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ I + ++ + APE V+ + DV++F +L E+ +
Sbjct: 236 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 76/180 (42%), Gaps = 21/180 (11%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHR------LKV 177
+ H+ +++L G C + ++ EY L + + ++HR L++
Sbjct: 56 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------MRHRFQTQQLLEM 105
Query: 178 AMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSR 237
+ A+ YL + + +L + L N++ V K+ DF S + + E S+
Sbjct: 106 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 162
Query: 238 FGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-GQSTRDLLRTHGSVRHLIEYLKNY 296
F +S PE F+ K D++ F ++ E+ + G+ + + H+ + L+ Y
Sbjct: 163 FPV-RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY 221
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 206 ILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGV-FNEKLDVYTFS 264
+L + V KL DF + + GE ++ S + Y APE G + +DV++
Sbjct: 167 LLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAG 223
Query: 265 TVLLELLTGQSTRDLLRTHGSVRHLIEYLK 294
VL ELL GQ + V L+E +K
Sbjct: 224 CVLAELLLGQP---IFPGDSGVDQLVEIIK 250
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 206 ILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGV-FNEKLDVYTFS 264
+L + V KL DF + + GE ++ S + Y APE G + +DV++
Sbjct: 154 LLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAG 210
Query: 265 TVLLELLTGQSTRDLLRTHGSVRHLIEYLK 294
VL ELL GQ + V L+E +K
Sbjct: 211 CVLAELLLGQP---IFPGDSGVDQLVEIIK 237
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 161 APQPHFEPLL-LKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDF 219
AP+ ++ L L+H + + +A + +L R + +L + IL +E+NV K+ DF
Sbjct: 186 APEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDF 242
Query: 220 SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ I + ++ + APE V+ + DV++F +L E+ +
Sbjct: 243 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 206 ILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGV-FNEKLDVYTFS 264
+L + V KL DF + + GE ++ S + Y APE G + +DV++
Sbjct: 188 LLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAG 244
Query: 265 TVLLELLTGQSTRDLLRTHGSVRHLIEYLK 294
VL ELL GQ + V L+E +K
Sbjct: 245 CVLAELLLGQP---IFPGDSGVDQLVEIIK 271
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 122 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GT 174
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G +EK+D+++ + E L G+
Sbjct: 175 LDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GT 169
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S P ++ G
Sbjct: 118 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS----GT 170
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GT 174
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 76/180 (42%), Gaps = 21/180 (11%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHR------LKV 177
+ H+ +++L G C + ++ EY L + + ++HR L++
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------MRHRFQTQQLLEM 110
Query: 178 AMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSR 237
+ A+ YL + + +L + L N++ V K+ DF S + + E S+
Sbjct: 111 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 167
Query: 238 FGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-GQSTRDLLRTHGSVRHLIEYLKNY 296
F +S PE F+ K D++ F ++ E+ + G+ + + H+ + L+ Y
Sbjct: 168 FPV-RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY 226
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 206 ILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGV-FNEKLDVYTFS 264
+L + V KL DF + + GE ++ S + Y APE G + +DV++
Sbjct: 182 LLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAG 238
Query: 265 TVLLELLTGQSTRDLLRTHGSVRHLIEYLK 294
VL ELL GQ + V L+E +K
Sbjct: 239 CVLAELLLGQP---IFPGDSGVDQLVEIIK 265
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 206 ILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGV-FNEKLDVYTFS 264
+L + V KL DF + + GE ++ S + Y APE G + +DV++
Sbjct: 190 LLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAG 246
Query: 265 TVLLELLTGQSTRDLLRTHGSVRHLIEYLK 294
VL ELL GQ + V L+E +K
Sbjct: 247 CVLAELLLGQP---IFPGDSGVDQLVEIIK 273
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 161 APQPHFEPLL-LKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDF 219
AP+ ++ L L+H + + +A + +L R + +L + IL +E+NV K+ DF
Sbjct: 181 APEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDF 237
Query: 220 SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ I + ++ + APE V+ + DV++F +L E+ +
Sbjct: 238 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 118 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GT 170
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 7/98 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A AL Y H R ++ ++ +L + K+ DF S+ P + R G
Sbjct: 124 LADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGT 176
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
Y PE G +EK+D++ + E L G D
Sbjct: 177 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 7/98 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A AL Y H R ++ ++ +L + K+ DF S+ P + R G
Sbjct: 123 LADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGT 175
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
Y PE G +EK+D++ + E L G D
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 206 ILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGV-FNEKLDVYTFS 264
+L + V KL DF + + GE ++ S + Y APE G + +DV++
Sbjct: 192 LLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAG 248
Query: 265 TVLLELLTGQSTRDLLRTHGSVRHLIEYLK 294
VL ELL GQ + V L+E +K
Sbjct: 249 CVLAELLLGQP---IFPGDSGVDQLVEIIK 275
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 34.7 bits (78), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 161 APQPHFEPLL-LKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDF 219
AP+ ++ L L+H + + +A + +L R + +L + IL +E+NV K+ DF
Sbjct: 188 APEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDF 244
Query: 220 SESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ I + ++ + APE V+ + DV++F +L E+ +
Sbjct: 245 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 34.3 bits (77), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 7/98 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A AL Y H R ++ ++ +L + K+ DF S+ P + R G
Sbjct: 123 LADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGT 175
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
Y PE G +EK+D++ + E L G D
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 34.3 bits (77), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 76/180 (42%), Gaps = 21/180 (11%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHR------LKV 177
+ H+ +++L G C + ++ EY L + + ++HR L++
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL----------REMRHRFQTQQLLEM 125
Query: 178 AMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSR 237
+ A+ YL + + +L + L N++ V K+ DF S + + E S+
Sbjct: 126 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 182
Query: 238 FGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-GQSTRDLLRTHGSVRHLIEYLKNY 296
F +S PE F+ K D++ F ++ E+ + G+ + + H+ + L+ Y
Sbjct: 183 FPV-RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY 241
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 34.3 bits (77), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GT 169
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 34.3 bits (77), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 206 ILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGV-FNEKLDVYTFS 264
+L + V KL DF + + GE ++ S + Y APE G + +DV++
Sbjct: 233 LLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAG 289
Query: 265 TVLLELLTGQSTRDLLRTHGSVRHLIEYLK 294
VL ELL GQ + V L+E +K
Sbjct: 290 CVLAELLLGQP---IFPGDSGVDQLVEIIK 316
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 34.3 bits (77), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 76/180 (42%), Gaps = 21/180 (11%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHR------LKV 177
+ H+ +++L G C + ++ EY L + + ++HR L++
Sbjct: 67 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------MRHRFQTQQLLEM 116
Query: 178 AMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSR 237
+ A+ YL + + +L + L N++ V K+ DF S + + E S+
Sbjct: 117 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 173
Query: 238 FGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-GQSTRDLLRTHGSVRHLIEYLKNY 296
F +S PE F+ K D++ F ++ E+ + G+ + + H+ + L+ Y
Sbjct: 174 FPV-RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY 232
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ DF S+ P + G
Sbjct: 117 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELC----GT 169
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 76/180 (42%), Gaps = 21/180 (11%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHR------LKV 177
+ H+ +++L G C + ++ EY L + + ++HR L++
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------MRHRFQTQQLLEM 110
Query: 178 AMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSR 237
+ A+ YL + + +L + L N++ V K+ DF S + + E S+
Sbjct: 111 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSK 167
Query: 238 FGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-GQSTRDLLRTHGSVRHLIEYLKNY 296
F +S PE F+ K D++ F ++ E+ + G+ + + H+ + L+ Y
Sbjct: 168 FPV-RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY 226
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSE-SISIPEGETHIITRSRFG 239
I+ AL +LH + I++ +L I+ N + KL DF SI +G +T G
Sbjct: 130 ISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG---TVTHXFCG 183
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
Y APE N +D ++ ++ ++LTG
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 84/206 (40%), Gaps = 29/206 (14%)
Query: 79 IKQDSTYKLYKGFWQ--ERLISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCC 136
+ ++ + +L+KG WQ + ++ V+K + + + F+ H ++L ++G C
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFN-EECPRLRIFSHPNVLPVLGAC 76
Query: 137 LETPI--PILVFEYGEYTTLRDRI-----FGAPQPHFEPLLLKHRLKVAMGIAHALAYLH 189
P P L+ + Y +L + + F Q +K A+ A A+LH
Sbjct: 77 QSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQ--------SQAVKFALDXARGXAFLH 128
Query: 190 VGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEY- 248
P I L S + +E+ A+ IS + + + R A + APE
Sbjct: 129 TLEPL-IPRHALNSRSVXIDEDXTAR-------ISXADVKFSFQSPGRXYAPAWVAPEAL 180
Query: 249 --KRGGVFNEKLDVYTFSTVLLELLT 272
K D ++F+ +L EL+T
Sbjct: 181 QKKPEDTNRRSADXWSFAVLLWELVT 206
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 67/157 (42%), Gaps = 14/157 (8%)
Query: 126 HKHILKLIGCCLETPIPILVFEYGEYTTL------RDRIFGAPQPHF----EPLLLKHRL 175
H++I+ L+G C +++ EY Y L + R+ P F + L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVL-ETDPAFAIANSTASTRDLL 167
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
+ +A +A+L + + ++ + +L +VAK+ DF + I +I+
Sbjct: 168 HFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ + APE V+ + DV+++ +L E+ +
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 34/157 (21%)
Query: 124 MDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIF---GAPQPHFEPLLLKHRLKVAMG 180
+ H ++KL + PI I+ E+ +L D + G+ QP L + +
Sbjct: 234 LQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQP------LPKLIDFSAQ 286
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
IA +A++ R + +L + IL + V K+ DF +R GA
Sbjct: 287 IAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFG--------------LARVGA 329
Query: 241 -----WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
WT APE G F K DV++F +L+E++T
Sbjct: 330 KFPIKWT--APEAINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
KV++ + LAYL I+ ++ IL N KL DF S + + +
Sbjct: 118 KVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 171
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
S G +Y APE +G ++ + D+++ L+EL G+
Sbjct: 172 SFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 8/155 (5%)
Query: 118 IVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKV 177
+ A M H +I++ E +V +Y E L RI F+ L
Sbjct: 74 VAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQE---DQILDW 130
Query: 178 AMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSR 237
+ I AL ++H R I+ ++ S I ++ +L DF I+ T + R+
Sbjct: 131 FVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFG--IARVLNSTVELARAC 185
Query: 238 FGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
G Y +PE +N K D++ VL EL T
Sbjct: 186 IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT 220
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 49/124 (39%), Gaps = 17/124 (13%)
Query: 151 YTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNE 210
Y R+R F P+ F A IA AL YLH IV+ +L IL +
Sbjct: 128 YHLQRERCFLEPRARF----------YAAEIASALGYLHS---LNIVYRDLKPENILLDS 174
Query: 211 ENVAKLFDFSESISIPEGETHIITRSRF-GAWTYSAPEYKRGGVFNEKLDVYTFSTVLLE 269
+ L DF E H T S F G Y APE ++ +D + VL E
Sbjct: 175 QGHIVLTDFG---LCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYE 231
Query: 270 LLTG 273
+L G
Sbjct: 232 MLYG 235
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ +F S+ P + G
Sbjct: 119 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC----GT 171
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 169 LLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEG 228
+LL + + IA +AY+ + + +L + +L +E + K+ DF + I +
Sbjct: 106 VLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 162
Query: 229 ETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
E ++F ++APE G F K +V++F +L E++T
Sbjct: 163 EYTAREGAKFPI-KWTAPEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 18/194 (9%)
Query: 87 LYKGFW---QERL---ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETP 140
+YKG W E + +++ E+ S A K ++ A + ++ +L+G CL +
Sbjct: 33 VYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTST 92
Query: 141 IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGN 200
+ LV + Y L D + + + L + L M IA ++YL +V +
Sbjct: 93 VQ-LVTQLMPYGCLLDHV----RENRGRLGSQDLLNWCMQIAKGMSYLE---DVRLVHRD 144
Query: 201 LISLCILFNEENVAKLFDFSES--ISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKL 258
L + +L N K+ DF + + I E E H W +R F +
Sbjct: 145 LAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRR--FTHQS 202
Query: 259 DVYTFSTVLLELLT 272
DV+++ + EL+T
Sbjct: 203 DVWSYGVTVWELMT 216
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A+AL+Y H + ++ ++ +L K+ +F S+ P + G
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC----GT 172
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
Y PE G + +EK+D+++ + E L G+
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A AL +LH I++ +L IL +EE KL DF S + E S G
Sbjct: 136 LALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK--AYSFCGT 190
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
Y APE + D ++F ++ E+LTG
Sbjct: 191 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 77/209 (36%), Gaps = 25/209 (11%)
Query: 62 SAKELEIATNNYDERKFIKQDSTYKLYKGFWQERLISVMKYNESYSDSACKFSINNIVYA 121
+A E + +N + I + +YKG ER ++V + S+++ + NI
Sbjct: 4 AASEPSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVF--SFANRQNFINEKNIYRV 61
Query: 122 AQMDHKHILKLIGCCLETPIP-----ILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLK 176
M+H +I + I +LV EY +L + H + RL
Sbjct: 62 PLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSCRL- 116
Query: 177 VAMGIAHALAYLHVGFPR------PIVFGNLISLCILFNEENVAKLFDFSESIS------ 224
A + LAYLH PR I +L S +L + + DF S+
Sbjct: 117 -AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRL 175
Query: 225 IPEGETHIITRSRFGAWTYSAPEYKRGGV 253
+ GE S G Y APE G V
Sbjct: 176 VRPGEEDNAAISEVGTIRYMAPEVLEGAV 204
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A AL +LH I++ +L IL +EE KL DF S + E S G
Sbjct: 135 LALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK--AYSFCGT 189
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
Y APE + D ++F ++ E+LTG
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2R53|A Chain A, Crystal Structure Analysis Of Bone Morphogenetic Protein-6
Variant B2 (b2-bmp-6)
pdb|2R53|B Chain B, Crystal Structure Analysis Of Bone Morphogenetic Protein-6
Variant B2 (b2-bmp-6)
Length = 116
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 68 IATNNYDERKFIKQDSTYKLYKGF----WQERLISVMKYNESYSDSACKFSIN 116
+A + +RK +K ++LY F WQ+ +I+ Y +Y D C F +N
Sbjct: 1 MAQAKHKQRKRLKACRKHELYVSFQDLGWQDWIIAPKGYAANYCDGECSFPLN 53
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 181 IAHALAYLH-VGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFG 239
+A AL +LH +G I++ +L IL +EE KL DF S + E S G
Sbjct: 135 LALALDHLHSLG----IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK--AYSFCG 188
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
Y APE + D ++F ++ E+LTG
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 80/205 (39%), Gaps = 38/205 (18%)
Query: 94 ERLISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTT 153
ER I +++ + S K + + +DH +I+KL + LV E +
Sbjct: 64 ERAIKIIRKTSVSTSSNSKL-LEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGE 122
Query: 154 LRDRIFGAPQPHFEPLLLKHRLK--------VAMGIAHALAYLHVGFPRPIVFGNLISLC 205
L D I HR+K + + + YLH IV +L
Sbjct: 123 LFDEII-------------HRMKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPEN 166
Query: 206 ILFN---EENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYT 262
+L ++ + K+ DF S E + R G Y APE R ++EK DV++
Sbjct: 167 LLLESKEKDALIKIVDFGLSAVF---ENQKKMKERLGTAYYIAPEVLRKK-YDEKCDVWS 222
Query: 263 FSTVLLELLT------GQSTRDLLR 281
+L LL GQ+ +++LR
Sbjct: 223 IGVILFILLAGYPPFGGQTDQEILR 247
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE++ K+ DF + + T ++ TR
Sbjct: 140 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR---- 192
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 193 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE++ K+ DF + + T ++ TR
Sbjct: 136 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR---- 188
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 189 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 61/160 (38%), Gaps = 21/160 (13%)
Query: 126 HKHILKLIGCCLETPIPILVFEYGEYTTLRDRI-----------FGAPQPHFEPLLLKHR 174
H +I+ L+G C L EY + L D + F L +
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 175 LKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHII- 233
L A +A + YL + + NL + IL E VAK+ DF + G+ +
Sbjct: 142 LHFAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADF----GLSRGQEVYVK 194
Query: 234 -TRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
T R + A E V+ DV+++ +L E+++
Sbjct: 195 KTMGRLPV-RWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 177 VAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRS 236
V + ALAYLH + ++ ++ S IL + KL DF I + +
Sbjct: 146 VCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK--RKX 200
Query: 237 RFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
G + APE ++ ++D+++ +++E++ G+
Sbjct: 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 215 KLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
K+ DF S + + R G Y APE RG ++EK DV++ +L LL+G
Sbjct: 164 KIIDFGLSTCFQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSG 218
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 67/163 (41%), Gaps = 15/163 (9%)
Query: 123 QMDHKHILKLIGCCLET------PIPILVFEYGEYTTLRDRIFGA---PQPHFEPLLLKH 173
+ DH H+ KL+G L + PIP+++ + ++ L + + P PL
Sbjct: 81 EFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLV 140
Query: 174 RLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHII 233
R V IA + YL R + +L + + E+ + DF S I G+ +
Sbjct: 141 RFMV--DIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQ 195
Query: 234 TRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT-GQS 275
+ + A E ++ DV+ F + E++T GQ+
Sbjct: 196 GCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQT 238
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 215 KLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
K+ DF S + + R G Y APE RG ++EK DV++ +L LL+G
Sbjct: 164 KIIDFGLSTCFQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSG 218
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 25/164 (15%)
Query: 118 IVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKV 177
I Y + H HI+KL ++V EY A F+ ++ K R+
Sbjct: 60 ISYLKLLRHPHIIKLYDVITTPTDIVMVIEY------------AGGELFDYIVEKKRMTE 107
Query: 178 AMG------IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETH 231
G I A+ Y H IV +L +L ++ K+ DF S + +G
Sbjct: 108 DEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-- 162
Query: 232 IITRSRFGAWTYSAPEYKRGGVF-NEKLDVYTFSTVLLELLTGQ 274
++ G+ Y+APE G ++ ++DV++ VL +L G+
Sbjct: 163 -FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Query: 178 AMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSR 237
A I+ L +LH R I++ +L ++ + E K+ DF + + TR
Sbjct: 126 AAEISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFG--MCKEHMMDGVTTREF 180
Query: 238 FGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQSTRD 278
G Y APE + + +D + + +L E+L GQ D
Sbjct: 181 CGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 235 RSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
+ R G Y APE RG ++EK DV++ +L LL+G
Sbjct: 181 KDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSG 218
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 27/189 (14%)
Query: 94 ERLISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTT 153
ER I ++K + + S ++ + Q+DH +I+KL + LV E
Sbjct: 31 ERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGE 90
Query: 154 LRDRIFGAPQPHFEPLLLKHRLK------VAMGIAHALAYLHVGFPRPIVFGNLISLCIL 207
L F+ ++L+ + + + YLH IV +L +L
Sbjct: 91 L-----------FDEIILRQKFSEVDAAVIMKQVLSGTTYLH---KHNIVHRDLKPENLL 136
Query: 208 F---NEENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFS 264
+ + + K+ DF S G + R G Y APE R ++EK DV++
Sbjct: 137 LESKSRDALIKIVDFGLSAHFEVGGK---MKERLGTAYYIAPEVLRKK-YDEKCDVWSCG 192
Query: 265 TVLLELLTG 273
+L LL G
Sbjct: 193 VILYILLCG 201
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 187 -W-YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 14/154 (9%)
Query: 124 MDHKHILKLIGCCLETP-IPILVFEYGEYTTLRDRIFGAPQPHFEPLLLKHRLKVAMGIA 182
++H ++L LIG L +P ++ Y + L I P P + K + + +A
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRS---PQRNPTV-KDLISFGLQVA 134
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFG--- 239
+ YL + V +L + + +E K+ DF + I + E + + + R
Sbjct: 135 RGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLP 191
Query: 240 -AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
WT A E + F K DV++F +L ELLT
Sbjct: 192 VKWT--ALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 139 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR---- 191
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 192 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 15/161 (9%)
Query: 116 NNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAP-QPHFEPLLLKHR 174
I +Q D +I + G L++ ++ EY + D + P + + +L+
Sbjct: 66 QEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREI 125
Query: 175 LKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIIT 234
LK L YLH + ++ + +L +E+ KL DF + + + + I
Sbjct: 126 LK-------GLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ---IK 172
Query: 235 RSRF-GAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
R+ F G + APE + ++ K D+++ +EL G+
Sbjct: 173 RNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 213
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 139 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR---- 191
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 192 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR---- 186
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 187 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 145 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR---- 197
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 198 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 27/189 (14%)
Query: 94 ERLISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTT 153
ER I ++K + + S ++ + Q+DH +I+KL + LV E
Sbjct: 48 ERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGE 107
Query: 154 LRDRIFGAPQPHFEPLLLKHRLK------VAMGIAHALAYLHVGFPRPIVFGNLISLCIL 207
L F+ ++L+ + + + YLH IV +L +L
Sbjct: 108 L-----------FDEIILRQKFSEVDAAVIMKQVLSGTTYLH---KHNIVHRDLKPENLL 153
Query: 208 FNEEN---VAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFS 264
++ + K+ DF S G + R G Y APE R ++EK DV++
Sbjct: 154 LESKSRDALIKIVDFGLSAHFEVGGK---MKERLGTAYYIAPEVLRKK-YDEKCDVWSCG 209
Query: 265 TVLLELLTG 273
+L LL G
Sbjct: 210 VILYILLCG 218
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE++ K+ DF + T ++ TR
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR---- 186
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 187 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 19/105 (18%)
Query: 181 IAHALAYLHVG--FPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRF 238
+ L YLH R + GN IL E+ ++ DF S + G ITR++
Sbjct: 125 VLEGLEYLHKNGQIHRDVKAGN-----ILLGEDGSVQIADFGVSAFLATGGD--ITRNKV 177
Query: 239 -----GAWTYSAPEYK---RGGVFNEKLDVYTFSTVLLELLTGQS 275
G + APE RG ++ K D+++F +EL TG +
Sbjct: 178 RKTFVGTPCWMAPEVMEQVRG--YDFKADIWSFGITAIELATGAA 220
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 10/100 (10%)
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVA--KLFDFSESISIPEGETHII 233
K A I L LH I+ +L IL ++ + K+ DF S +
Sbjct: 204 KFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS-CYEHQRVYTX 259
Query: 234 TRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
+SRF Y APE G + +D+++ +L ELLTG
Sbjct: 260 IQSRF----YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 19/105 (18%)
Query: 181 IAHALAYLHVG--FPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRF 238
+ L YLH R + GN IL E+ ++ DF S + G ITR++
Sbjct: 130 VLEGLEYLHKNGQIHRDVKAGN-----ILLGEDGSVQIADFGVSAFLATGGD--ITRNKV 182
Query: 239 -----GAWTYSAPEYK---RGGVFNEKLDVYTFSTVLLELLTGQS 275
G + APE RG ++ K D+++F +EL TG +
Sbjct: 183 RKTFVGTPCWMAPEVMEQVRG--YDFKADIWSFGITAIELATGAA 225
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 10/100 (10%)
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVA--KLFDFSESISIPEGETHII 233
K A I L LH I+ +L IL ++ + K+ DF S +
Sbjct: 204 KFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC-YEHQRVYTX 259
Query: 234 TRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
+SRF Y APE G + +D+++ +L ELLTG
Sbjct: 260 IQSRF----YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 141 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR---- 193
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 194 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 187 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 141 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR---- 193
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 194 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 64/160 (40%), Gaps = 23/160 (14%)
Query: 118 IVYAAQMDHKHILKLIGCCLETPIPILVFEYG-----EYTTLRDRIFGAPQPHFEPLLLK 172
I Y + H HI+KL I+V EY +Y RD++ F
Sbjct: 65 ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRF------ 118
Query: 173 HRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHI 232
I A+ Y H IV +L +L +E K+ DF S + +G
Sbjct: 119 -----FQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--- 167
Query: 233 ITRSRFGAWTYSAPEYKRGGVF-NEKLDVYTFSTVLLELL 271
++ G+ Y+APE G ++ ++DV++ +L +L
Sbjct: 168 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 207
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 64/160 (40%), Gaps = 23/160 (14%)
Query: 118 IVYAAQMDHKHILKLIGCCLETPIPILVFEYG-----EYTTLRDRIFGAPQPHFEPLLLK 172
I Y + H HI+KL I+V EY +Y RD++ F
Sbjct: 64 ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRF------ 117
Query: 173 HRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHI 232
I A+ Y H IV +L +L +E K+ DF S + +G
Sbjct: 118 -----FQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--- 166
Query: 233 ITRSRFGAWTYSAPEYKRGGVF-NEKLDVYTFSTVLLELL 271
++ G+ Y+APE G ++ ++DV++ +L +L
Sbjct: 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 206
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 187 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 218 DFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
DF S+ P + ++ G Y PE G + NEK+D++ + ELL G
Sbjct: 166 DFGWSVHAPS----LRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 187 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 141 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR---- 193
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 194 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 187 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 140 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 192
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 193 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 187 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 187 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 31.2 bits (69), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 139 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 191
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 192 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 31.2 bits (69), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 140 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 192
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 193 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 31.2 bits (69), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 187 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 31.2 bits (69), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 133 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 185
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 186 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 144 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 196
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 197 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 231
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 64/160 (40%), Gaps = 23/160 (14%)
Query: 118 IVYAAQMDHKHILKLIGCCLETPIPILVFEYG-----EYTTLRDRIFGAPQPHFEPLLLK 172
I Y + H HI+KL I+V EY +Y RD++ F
Sbjct: 55 ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRF------ 108
Query: 173 HRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHI 232
I A+ Y H IV +L +L +E K+ DF S + +G
Sbjct: 109 -----FQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--- 157
Query: 233 ITRSRFGAWTYSAPEYKRGGVF-NEKLDVYTFSTVLLELL 271
++ G+ Y+APE G ++ ++DV++ +L +L
Sbjct: 158 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 197
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 10/100 (10%)
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVA--KLFDFSESISIPEGETHII 233
K A I L LH I+ +L IL ++ + K+ DF S +
Sbjct: 204 KFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS-CYEHQRVYXX 259
Query: 234 TRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
+SRF Y APE G + +D+++ +L ELLTG
Sbjct: 260 IQSRF----YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 141 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 193
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 194 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 130 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 182
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 183 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 146 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 198
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 199 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 146 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 198
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 199 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 140 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 192
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 193 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 187 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 131 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 183
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 184 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 218
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 139 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 191
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 192 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 136 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 188
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 189 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 145 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 197
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 198 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 136 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 188
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 189 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 187 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 136 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 188
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 189 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 131 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 183
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 184 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 218
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 154 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 206
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 207 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 146 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 198
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 199 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 132 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 184
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 185 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 219
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 130 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 182
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 183 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 153 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 205
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 206 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 154 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 206
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 207 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 153 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 205
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 206 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRF-G 239
I L YLH + ++ + +L +E KL DF + + + + I R+ F G
Sbjct: 128 ILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ---IKRNXFVG 181
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
+ APE + ++ K D+++ +EL G+
Sbjct: 182 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 157 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 209
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 210 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 130 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 182
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 183 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
I L YLH + ++ + +L +E KL DF + + +T I + G
Sbjct: 113 ILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNTFVGT 167
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
+ APE + ++ K D+++ +EL G+
Sbjct: 168 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 31.2 bits (69), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 64/160 (40%), Gaps = 23/160 (14%)
Query: 118 IVYAAQMDHKHILKLIGCCLETPIPILVFEYG-----EYTTLRDRIFGAPQPHFEPLLLK 172
I Y + H HI+KL I+V EY +Y RD++ F
Sbjct: 59 ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRF------ 112
Query: 173 HRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHI 232
I A+ Y H IV +L +L +E K+ DF S + +G
Sbjct: 113 -----FQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--- 161
Query: 233 ITRSRFGAWTYSAPEYKRGGVF-NEKLDVYTFSTVLLELL 271
++ G+ Y+APE G ++ ++DV++ +L +L
Sbjct: 162 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 201
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 31.2 bits (69), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 10/157 (6%)
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEY---GEYTT-LRDRIFGAPQPHFEPLLLKHRLKV 177
++++H++I++ IG L++ ++ E G+ + LR+ QP L + L V
Sbjct: 89 SKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS--LAMLDLLHV 146
Query: 178 AMGIAHALAYLHVG--FPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
A IA YL R I N + C VAK+ DF + I +
Sbjct: 147 ARDIACGCQYLEENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMARDIYRASYYRKGG 204
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ PE G+F K D ++F +L E+ +
Sbjct: 205 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 61/160 (38%), Gaps = 21/160 (13%)
Query: 126 HKHILKLIGCCLETPIPILVFEYGEYTTLRDRI-----------FGAPQPHFEPLLLKHR 174
H +I+ L+G C L EY + L D + F L +
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 175 LKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHII- 233
L A +A + YL + + +L + IL E VAK+ DF + G+ +
Sbjct: 135 LHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADF----GLSRGQEVYVK 187
Query: 234 -TRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
T R + A E V+ DV+++ +L E+++
Sbjct: 188 KTMGRLPV-RWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRF-G 239
I L YLH + ++ + +L +E KL DF + + + + I R+ F G
Sbjct: 113 ILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ---IKRNXFVG 166
Query: 240 AWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
+ APE + ++ K D+++ +EL G+
Sbjct: 167 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 64/158 (40%), Gaps = 13/158 (8%)
Query: 118 IVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGAPQPHFE-PLLLKHRLK 176
I +Q D ++ K G L+ ++ EY + D + P + +L+ LK
Sbjct: 76 ITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILK 135
Query: 177 VAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRS 236
L YLH + ++ + +L +E KL DF + + + T I +
Sbjct: 136 -------GLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNT 183
Query: 237 RFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
G + APE + ++ K D+++ +EL G+
Sbjct: 184 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 173 HRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESI-SIPEGETH 231
H + A IA L +L + I++ +L ++ + E K+ DF +I +G
Sbjct: 122 HAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG--- 175
Query: 232 IITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQS 275
+ T+ G Y APE + + +D + F +L E+L GQ+
Sbjct: 176 VTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQA 219
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 61/160 (38%), Gaps = 21/160 (13%)
Query: 126 HKHILKLIGCCLETPIPILVFEYGEYTTLRDRI-----------FGAPQPHFEPLLLKHR 174
H +I+ L+G C L EY + L D + F L +
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 175 LKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHII- 233
L A +A + YL + + +L + IL E VAK+ DF + G+ +
Sbjct: 145 LHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADF----GLSRGQEVYVK 197
Query: 234 -TRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
T R + A E V+ DV+++ +L E+++
Sbjct: 198 KTMGRLPV-RWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 10/157 (6%)
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEY---GEYTT-LRDRIFGAPQPHFEPLLLKHRLKV 177
++++H++I++ IG L++ ++ E G+ + LR+ QP L + L V
Sbjct: 103 SKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS--LAMLDLLHV 160
Query: 178 AMGIAHALAYLHVG--FPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
A IA YL R I N + C VAK+ DF + I +
Sbjct: 161 ARDIACGCQYLEENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMARDIYRASYYRKGG 218
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ PE G+F K D ++F +L E+ +
Sbjct: 219 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 173 HRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESI-SIPEGETH 231
H + A IA L +L + I++ +L ++ + E K+ DF +I +G
Sbjct: 443 HAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG--- 496
Query: 232 IITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQS 275
+ T+ G Y APE + + +D + F +L E+L GQ+
Sbjct: 497 VTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQA 540
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 6/120 (5%)
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
KV++ + L YL I+ ++ IL N KL DF S + + +
Sbjct: 127 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 180
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQSTRDLLRTHGSVRHLIEYLKN 295
S G +Y +PE +G ++ + D+++ L+E+ G+ ++ L++Y+ N
Sbjct: 181 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVN 240
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESI-SIPEGETHIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + E ++ TR
Sbjct: 157 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR---- 209
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 210 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR---- 186
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 187 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 10/157 (6%)
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEY---GEYTT-LRDRIFGAPQPHFEPLLLKHRLKV 177
++ +H++I++ IG L++ ++ E G+ + LR+ QP L + L V
Sbjct: 115 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS--LAMLDLLHV 172
Query: 178 AMGIAHALAYLHVG--FPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
A IA YL R I N + C VAK+ DF + I +
Sbjct: 173 ARDIACGCQYLEENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMARDIYRASYYRKGG 230
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ PE G+F K D ++F +L E+ +
Sbjct: 231 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Query: 183 HALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISI-PEGETHIITRSRFGAW 241
AL +LH ++ N+ S IL + KL DF I PE + G
Sbjct: 128 QALEFLH---SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---STMVGTP 181
Query: 242 TYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
+ APE + K+D+++ + +E++ G+
Sbjct: 182 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 56/126 (44%), Gaps = 12/126 (9%)
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
KV++ + L YL I+ ++ IL N KL DF S + + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 161
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ------STRDLLRTHGSVRHL 289
S G +Y +PE +G ++ + D+++ L+E+ G+ ++ R ++ L
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFEL 221
Query: 290 IEYLKN 295
++Y+ N
Sbjct: 222 LDYIVN 227
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T + TR
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR---- 186
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 187 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 10/157 (6%)
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEY---GEYTT-LRDRIFGAPQPHFEPLLLKHRLKV 177
++ +H++I++ IG L++ ++ E G+ + LR+ QP L + L V
Sbjct: 89 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS--LAMLDLLHV 146
Query: 178 AMGIAHALAYLHVG--FPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
A IA YL R I N + C VAK+ DF + I +
Sbjct: 147 ARDIACGCQYLEENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMAQDIYRASYYRKGG 204
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ PE G+F K D ++F +L E+ +
Sbjct: 205 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
+A L +LH I++ +L IL +EE KL DF S + E S G
Sbjct: 139 LALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKK--AYSFCGT 193
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
Y APE + D +++ ++ E+LTG
Sbjct: 194 VEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 73/182 (40%), Gaps = 10/182 (5%)
Query: 97 ISVMKYNESYSDSACKFSINNIVYAAQMDHKHILKLIGCCLETPIPILVFEY---GEYTT 153
++V E YS+ + + ++ +H++I++ IG L++ ++ E G+ +
Sbjct: 78 VAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 137
Query: 154 -LRDRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVG--FPRPIVFGNLISLCILFNE 210
LR+ QP L + L VA IA YL R I N + C
Sbjct: 138 FLRETRPRPSQP--SSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP--GP 193
Query: 211 ENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLEL 270
VAK+ DF + I + + PE G+F K D ++F +L E+
Sbjct: 194 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
Query: 271 LT 272
+
Sbjct: 254 FS 255
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 184 ALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFGAWT 242
L Y+H I+ +L + NE++ ++ DF + E T ++ TR W
Sbjct: 143 GLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----W- 193
Query: 243 YSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
Y APE + +N+ +D+++ ++ ELL G++
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 184 ALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFGAWT 242
L Y+H I+ +L + NE++ ++ DF + E T ++ TR W
Sbjct: 143 GLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----W- 193
Query: 243 YSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
Y APE + +N+ +D+++ ++ ELL G++
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
KV++ + L YL I+ ++ IL N KL DF S + + +
Sbjct: 135 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 188
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
S G +Y +PE +G ++ + D+++ L+E+ G+
Sbjct: 189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 10/157 (6%)
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEY---GEYTT-LRDRIFGAPQPHFEPLLLKHRLKV 177
++ +H++I++ IG L++ ++ E G+ + LR+ QP L + L V
Sbjct: 105 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS--LAMLDLLHV 162
Query: 178 AMGIAHALAYLHVG--FPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
A IA YL R I N + C VAK+ DF + I +
Sbjct: 163 ARDIACGCQYLEENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMARDIYRASYYRKGG 220
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ PE G+F K D ++F +L E+ +
Sbjct: 221 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 10/157 (6%)
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEY---GEYTT-LRDRIFGAPQPHFEPLLLKHRLKV 177
++ +H++I++ IG L++ ++ E G+ + LR+ QP L + L V
Sbjct: 95 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS--LAMLDLLHV 152
Query: 178 AMGIAHALAYLHVG--FPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
A IA YL R I N + C VAK+ DF + I +
Sbjct: 153 ARDIACGCQYLEENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMARDIYRASYYRKGG 210
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ PE G+F K D ++F +L E+ +
Sbjct: 211 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 10/157 (6%)
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEY---GEYTT-LRDRIFGAPQPHFEPLLLKHRLKV 177
++ +H++I++ IG L++ ++ E G+ + LR+ QP L + L V
Sbjct: 89 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS--LAMLDLLHV 146
Query: 178 AMGIAHALAYLHVG--FPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
A IA YL R I N + C VAK+ DF + I +
Sbjct: 147 ARDIACGCQYLEENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMARDIYRASYYRKGG 204
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ PE G+F K D ++F +L E+ +
Sbjct: 205 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ D+ + + T ++ TR
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR---- 186
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 187 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 10/157 (6%)
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEY---GEYTT-LRDRIFGAPQPHFEPLLLKHRLKV 177
++ +H++I++ IG L++ ++ E G+ + LR+ QP L + L V
Sbjct: 103 SKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSS--LAMLDLLHV 160
Query: 178 AMGIAHALAYLHVG--FPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
A IA YL R I N + C VAK+ DF + I +
Sbjct: 161 ARDIACGCQYLEENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMARDIYRASYYRKGG 218
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ PE G+F K D ++F +L E+ +
Sbjct: 219 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3FSP|A Chain A, Muty Adenine Glycosylase Bound To A Transition State
Analog (1n) Paired With Dg In Duplexed Dna
pdb|3FSQ|A Chain A, Muty Adenine Glycosylase Bound To A Transition State
Analog (1n) Paired With D(8-Oxog) In Duplexed Dna
Length = 369
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 17/80 (21%)
Query: 179 MGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRF 238
+G +LAY G P P V GN++ + +++LF ++ I+ P TR RF
Sbjct: 131 VGAVLSLAY---GVPEPAVDGNVMRV--------LSRLFLVTDDIAKPS------TRKRF 173
Query: 239 GAWTYSAPEYKRGGVFNEKL 258
Y+ G FNE L
Sbjct: 174 EQIVREIMAYENPGAFNEAL 193
>pdb|1RRS|A Chain A, Muty Adenine Glycosylase In Complex With Dna Containing An
Abasic Site
pdb|1VRL|A Chain A, Muty Adenine Glycosylase In Complex With Dna And Soaked
Adenine Free Base
Length = 369
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 17/80 (21%)
Query: 179 MGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRF 238
+G +LAY G P P V GN++ + +++LF ++ I+ P TR RF
Sbjct: 131 VGAVLSLAY---GVPEPAVNGNVMRV--------LSRLFLVTDDIAKPS------TRKRF 173
Query: 239 GAWTYSAPEYKRGGVFNEKL 258
Y+ G FNE L
Sbjct: 174 EQIVREIMAYENPGAFNEAL 193
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 10/157 (6%)
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEY---GEYTT-LRDRIFGAPQPHFEPLLLKHRLKV 177
++ +H++I++ IG L++ ++ E G+ + LR+ QP L + L V
Sbjct: 88 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS--LAMLDLLHV 145
Query: 178 AMGIAHALAYLHVG--FPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
A IA YL R I N + C VAK+ DF + I +
Sbjct: 146 ARDIACGCQYLEENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMARDIYRASYYRKGG 203
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ PE G+F K D ++F +L E+ +
Sbjct: 204 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 6/155 (3%)
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEYGEYTTLRDRIFGA-PQP-HFEPLLLKHRLKVAM 179
++ +H++I++ IG L++ ++ E L+ + P+P L + L VA
Sbjct: 80 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 139
Query: 180 GIAHALAYLHVG--FPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSR 237
IA YL R I N + C VAK+ DF + I +
Sbjct: 140 DIACGCQYLEENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMARDIYRASYYRKGGCA 197
Query: 238 FGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ PE G+F K D ++F +L E+ +
Sbjct: 198 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 184 ALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESI-SIPEGETHIITRSRFGAWT 242
L Y+H +V +L + NE+ K+ DF + + E +++TR W
Sbjct: 138 GLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----W- 188
Query: 243 YSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
Y APE + +N+ +D+++ ++ E+LTG++
Sbjct: 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 222
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 243 YSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQSTRDLLRTHGSVRHL 289
Y APE ++ D+++F VL EL TG L RTH + HL
Sbjct: 225 YRAPEVILNLGWDVSSDMWSFGCVLAELYTGSL---LFRTHEHMEHL 268
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESI-SIPEGETHIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + E + TR
Sbjct: 154 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR---- 206
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 207 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
KV++ + L YL I+ ++ IL N KL DF S + + +
Sbjct: 170 KVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 223
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
S G +Y +PE +G ++ + D+++ L+E+ G+
Sbjct: 224 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
KV++ + L YL I+ ++ IL N KL DF S + + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 161
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
S G +Y +PE +G ++ + D+++ L+E+ G+
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
KV++ + L YL I+ ++ IL N KL DF S + + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 161
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
S G +Y +PE +G ++ + D+++ L+E+ G+
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 10/157 (6%)
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEY---GEYTT-LRDRIFGAPQPHFEPLLLKHRLKV 177
++ +H++I++ IG L++ ++ E G+ + LR+ QP L + L V
Sbjct: 88 SKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSS--LAMLDLLHV 145
Query: 178 AMGIAHALAYLHVG--FPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
A IA YL R I N + C VAK+ DF + I +
Sbjct: 146 ARDIACGCQYLEENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMARDIYRASYYRKGG 203
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ PE G+F K D ++F +L E+ +
Sbjct: 204 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 184 ALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESI-SIPEGETHIITRSRFGAWT 242
L Y+H +V +L + NE+ K+ DF + + E +++TR W
Sbjct: 156 GLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----W- 206
Query: 243 YSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
Y APE + +N+ +D+++ ++ E+LTG++
Sbjct: 207 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 240
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 54/139 (38%), Gaps = 20/139 (14%)
Query: 166 FEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISI 225
F+P L H +A + HAL +LH + +L ILF L++ +S
Sbjct: 126 FQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEE 182
Query: 226 PEGETHIITRSRFGAWT--------------YSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
+ I + FG+ T Y PE + + DV++ +L E
Sbjct: 183 KSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYY 242
Query: 272 TGQSTRDLLRTHGSVRHLI 290
G + L +TH + HL+
Sbjct: 243 RGFT---LFQTHENREHLV 258
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
KV++ + L YL I+ ++ IL N KL DF S + + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 161
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
S G +Y +PE +G ++ + D+++ L+E+ G+
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + T ++ TR
Sbjct: 163 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 215
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N +D+++ ++ ELLTG++
Sbjct: 216 -W-YRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRT 250
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 54/139 (38%), Gaps = 20/139 (14%)
Query: 166 FEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISI 225
F+P L H +A + HAL +LH + +L ILF L++ +S
Sbjct: 117 FQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEE 173
Query: 226 PEGETHIITRSRFGAWT--------------YSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
+ I + FG+ T Y PE + + DV++ +L E
Sbjct: 174 KSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYY 233
Query: 272 TGQSTRDLLRTHGSVRHLI 290
G + L +TH + HL+
Sbjct: 234 RGFT---LFQTHENREHLV 249
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESI-SIPEGETHIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + E + TR
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR---- 186
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 187 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3TTO|A Chain A, Crystal Structure Of Leuconostoc Mesenteroides Nrrl B-1299
N- Terminally Truncated Dextransucrase Dsr-E In
Triclinic Form
pdb|3TTO|B Chain B, Crystal Structure Of Leuconostoc Mesenteroides Nrrl B-1299
N- Terminally Truncated Dextransucrase Dsr-E In
Triclinic Form
pdb|3TTO|C Chain C, Crystal Structure Of Leuconostoc Mesenteroides Nrrl B-1299
N- Terminally Truncated Dextransucrase Dsr-E In
Triclinic Form
pdb|3TTO|D Chain D, Crystal Structure Of Leuconostoc Mesenteroides Nrrl B-1299
N- Terminally Truncated Dextransucrase Dsr-E In
Triclinic Form
pdb|3TTQ|A Chain A, Crystal Structure Of Leuconostoc Mesenteroides Nrrl B-1299
N- Terminally Truncated Dextransucrase Dsr-E In
Orthorhombic Apo-Form At 1.9 Angstrom Resolution
Length = 1108
Score = 29.6 bits (65), Expect = 2.5, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 16 QPQMGSILTKFK--DRTDKRTLMVRNGARVLKELIASSHGKYNPYRIFSAKELEIATNNY 73
Q ++G+ +T D T+ ++ G + + +++ KYN Y I S L + +
Sbjct: 569 QEKVGAAITDATGADWTNFTDEQLKAGLELFYKDQRATNKKYNSYNIPSIYALMLTNKDT 628
Query: 74 DERKFI----KQDSTYKLYKGFWQERLISVMKYNESYSDSACKFSINN 117
R + + D Y K + + L+S+M +SY S++N
Sbjct: 629 VPRMYYGDMYQDDGQYMANKSIYYDALVSLMTARKSYVSGGQTMSVDN 676
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
KV++ + L YL I+ ++ IL N KL DF S + +
Sbjct: 111 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDEMAN 164
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQSTRDLLRTHGSVRHLIEYLKN 295
G +Y +PE +G ++ + D+++ L+E+ G+ R + ++ L++Y+ N
Sbjct: 165 EFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPM----AIFELLDYIVN 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESI-SIPEGETHIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + E + TR
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR---- 186
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 187 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 176 KVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
KV++ + L YL I+ ++ IL N KL DF S + + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 161
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
S G +Y +PE +G ++ + D+++ L+E+ G+
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 54/139 (38%), Gaps = 20/139 (14%)
Query: 166 FEPLLLKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISI 225
F+P L H +A + HAL +LH + +L ILF L++ +S
Sbjct: 149 FQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEE 205
Query: 226 PEGETHIITRSRFGAWT--------------YSAPEYKRGGVFNEKLDVYTFSTVLLELL 271
+ I + FG+ T Y PE + + DV++ +L E
Sbjct: 206 KSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYY 265
Query: 272 TGQSTRDLLRTHGSVRHLI 290
G + L +TH + HL+
Sbjct: 266 RGFT---LFQTHENREHLV 281
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESI-SIPEGETHIITRSRFG 239
I L Y+H I+ +L + NE+ K+ DF + + E + TR
Sbjct: 130 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR---- 182
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 183 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 10/157 (6%)
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEY---GEYTT-LRDRIFGAPQPHFEPLLLKHRLKV 177
++ +H++I++ IG L++ ++ E G+ + LR+ QP L + L V
Sbjct: 106 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS--LAMLDLLHV 163
Query: 178 AMGIAHALAYLHVG--FPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
A IA YL R I N + C VAK+ DF + I +
Sbjct: 164 ARDIACGCQYLEENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMARDIYRAGYYRKGG 221
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ PE G+F K D ++F +L E+ +
Sbjct: 222 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 10/157 (6%)
Query: 122 AQMDHKHILKLIGCCLETPIPILVFEY---GEYTT-LRDRIFGAPQPHFEPLLLKHRLKV 177
++ +H++I++ IG L++ ++ E G+ + LR+ QP L + L V
Sbjct: 129 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS--LAMLDLLHV 186
Query: 178 AMGIAHALAYLHVG--FPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITR 235
A IA YL R I N + C VAK+ DF + I +
Sbjct: 187 ARDIACGCQYLEENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMARDIYRAGYYRKGG 244
Query: 236 SRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLT 272
+ PE G+F K D ++F +L E+ +
Sbjct: 245 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 184 ALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFGAWT 242
L Y+H I+ +L + NE+ ++ DF + E T ++ TR W
Sbjct: 135 GLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----W- 185
Query: 243 YSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
Y APE + +N+ +D+++ ++ ELL G++
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 219
>pdb|1FOH|A Chain A, Phenol Hydroxylase From Trichosporon Cutaneum
pdb|1FOH|B Chain B, Phenol Hydroxylase From Trichosporon Cutaneum
pdb|1FOH|C Chain C, Phenol Hydroxylase From Trichosporon Cutaneum
pdb|1FOH|D Chain D, Phenol Hydroxylase From Trichosporon Cutaneum
Length = 664
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 252 GVFNEKLDVYTFSTVLLELLTGQSTRDLLRTHGSVRH 288
G+ +D Y L +LTG++ RD+L+T+ RH
Sbjct: 369 GMNTSMMDTYNLGWKLGLVLTGRAKRDILKTYEEERH 405
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 70/167 (41%), Gaps = 16/167 (9%)
Query: 114 SINNIVYAAQMDHKHILKLIGCCLETPIPILVFEYGEYTT---LRDRIFGAPQPHFEPLL 170
+I I ++ H++I++L LVFE+ + + R G E L
Sbjct: 50 AIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNL 109
Query: 171 LKHRLKVAMGIAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDF--SESISIPEG 228
+K+ + LA+ H I+ +L +L N+ KL DF + + IP
Sbjct: 110 VKY---FQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP-- 161
Query: 229 ETHIITRSRFGAWTYSAPEYKRGG-VFNEKLDVYTFSTVLLELLTGQ 274
+ + W Y AP+ G ++ +D+++ +L E++TG+
Sbjct: 162 -VNTFSSEVVTLW-YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 55/142 (38%), Gaps = 23/142 (16%)
Query: 141 IPILVFEYGEYTTLR------DRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPR 194
+P+L EY E LR + G + LL I+ AL YLH
Sbjct: 93 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLL--------SDISSALRYLHENR-- 142
Query: 195 PIVFGNLISLCILFN---EENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRG 251
I+ +L I+ + + K+ D + + +GE + G Y APE
Sbjct: 143 -IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQYLAPELLEQ 198
Query: 252 GVFNEKLDVYTFSTVLLELLTG 273
+ +D ++F T+ E +TG
Sbjct: 199 KKYTVTVDYWSFGTLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 55/142 (38%), Gaps = 23/142 (16%)
Query: 141 IPILVFEYGEYTTLR------DRIFGAPQPHFEPLLLKHRLKVAMGIAHALAYLHVGFPR 194
+P+L EY E LR + G + LL I+ AL YLH
Sbjct: 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLL--------SDISSALRYLHENR-- 141
Query: 195 PIVFGNLISLCILFN---EENVAKLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRG 251
I+ +L I+ + + K+ D + + +GE + G Y APE
Sbjct: 142 -IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQYLAPELLEQ 197
Query: 252 GVFNEKLDVYTFSTVLLELLTG 273
+ +D ++F T+ E +TG
Sbjct: 198 KKYTVTVDYWSFGTLAFECITG 219
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 215 KLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
K+ DF S + + + +SRF Y +PE G ++ +D+++ +L+E+ TG+
Sbjct: 182 KIVDFGSSCQLGQ-RIYQXIQSRF----YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE 236
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 215 KLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
K+ DF S + + + +SRF Y +PE G ++ +D+++ +L+E+ TG+
Sbjct: 201 KIVDFGSSCQLGQ-RIYQXIQSRF----YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE 255
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 215 KLFDFSESISIPEGETHIITRSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTGQ 274
K+ DF S + + + +SRF Y +PE G ++ +D+++ +L+E+ TG+
Sbjct: 201 KIVDFGSSCQLGQ-RIYQXIQSRF----YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE 255
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGETHIITRSRFGA 240
I AL YLH + I+ +L IL NE+ ++ DF + + S G
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 241 WTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
Y +PE ++ D++ ++ +L+ G
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3IVD|A Chain A, Putative 5'-Nucleotidase (C4898) From Escherichia Coli In
Complex With Uridine
pdb|3IVD|B Chain B, Putative 5'-Nucleotidase (C4898) From Escherichia Coli In
Complex With Uridine
pdb|3IVE|A Chain A, Putative 5'-Nucleotidase (C4898) From Escherichia Coli In
Complex With Cytidine
Length = 509
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 43/112 (38%), Gaps = 21/112 (18%)
Query: 186 AYLHVGFPRPIVFGNLISLCILFNEENVAKL-FDFSESISIPEGETHIITRSRFGAWTYS 244
+ HVG P PI GN + L +V KL D+ E + H T F T
Sbjct: 232 GHAHVGTPEPIKVGNTLILSTDSGGIDVGKLVLDYKE-------KPHNFTVKNFELKTIY 284
Query: 245 APEYKRG-------GVFNEKLDVYTFSTVLLELLTGQSTRDLLRTHGSVRHL 289
A E+K +N+KLD TV QS +L R +G L
Sbjct: 285 ADEWKPDQQTKQVIDGWNKKLDEVVQQTV------AQSPVELKRAYGESASL 330
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ F + + T ++ TR
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR---- 186
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 187 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1XP4|A Chain A, Crystal Structure Of A Peptidoglycan Synthesis Regulatory
Factor (pbp3) From Streptococcus Pneumoniae
pdb|1XP4|B Chain B, Crystal Structure Of A Peptidoglycan Synthesis Regulatory
Factor (pbp3) From Streptococcus Pneumoniae
pdb|1XP4|C Chain C, Crystal Structure Of A Peptidoglycan Synthesis Regulatory
Factor (pbp3) From Streptococcus Pneumoniae
pdb|1XP4|D Chain D, Crystal Structure Of A Peptidoglycan Synthesis Regulatory
Factor (pbp3) From Streptococcus Pneumoniae
Length = 379
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 37 VRNGARVLKELIASSHGKYNPYRIFSAKE--LEIATNNYDERKFIKQDSTYKLYKGFWQE 94
V G RV+ ++ + H NPY F+A + ++ + RK ++Q Y+ K Q+
Sbjct: 240 VEKGXRVITVVLNADHQDNNPYARFTATSSLXDYISSTFTLRKIVQQGDAYQDSKAPVQD 299
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 181 IAHALAYLHVGFPRPIVFGNLISLCILFNEENVAKLFDFSESISIPEGET-HIITRSRFG 239
I L Y+H I+ +L + NE+ K+ D + + T ++ TR
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR---- 186
Query: 240 AWTYSAPEYKRGGV-FNEKLDVYTFSTVLLELLTGQS 275
W Y APE + +N+ +D+++ ++ ELLTG++
Sbjct: 187 -W-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 235 RSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
+ + G Y APE G ++EK DV++ +L LL+G
Sbjct: 186 KDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSG 223
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 235 RSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
+ + G Y APE G ++EK DV++ +L LL+G
Sbjct: 209 KDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSG 246
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 235 RSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
+ + G Y APE G ++EK DV++ +L LL+G
Sbjct: 192 KDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSG 229
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 235 RSRFGAWTYSAPEYKRGGVFNEKLDVYTFSTVLLELLTG 273
+ + G Y APE G ++EK DV++ +L LL+G
Sbjct: 210 KDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSG 247
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,969,031
Number of Sequences: 62578
Number of extensions: 420877
Number of successful extensions: 1708
Number of sequences better than 100.0: 571
Number of HSP's better than 100.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 477
Number of HSP's that attempted gapping in prelim test: 1535
Number of HSP's gapped (non-prelim): 573
length of query: 338
length of database: 14,973,337
effective HSP length: 99
effective length of query: 239
effective length of database: 8,778,115
effective search space: 2097969485
effective search space used: 2097969485
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 52 (24.6 bits)