BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>038825
MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFK
NLIDEKDVKGNTPLH

High Scoring Gene Products

Symbol, full name Information P value
AT1G03670 protein from Arabidopsis thaliana 4.8e-05
AT4G03460 protein from Arabidopsis thaliana 0.00024

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  038825
        (75 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2020833 - symbol:AT1G03670 "AT1G03670" species...   107  4.8e-05   1
TAIR|locus:2128781 - symbol:AT4G03460 "AT4G03460" species...   101  0.00024   1


>TAIR|locus:2020833 [details] [associations]
            symbol:AT1G03670 "AT1G03670" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR002110 PROSITE:PS50088 SMART:SM00248
            EMBL:CP002684 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
            SUPFAM:SSF48403 PROSITE:PS50297 InterPro:IPR027001
            PANTHER:PTHR24177 InterPro:IPR027002 InterPro:IPR026961
            PANTHER:PTHR24177:SF1 Pfam:PF13962 IPI:IPI01019841
            RefSeq:NP_171863.1 UniGene:At.51471 ProteinModelPortal:F4I2G1
            SMR:F4I2G1 EnsemblPlants:AT1G03670.1 GeneID:839438
            KEGG:ath:AT1G03670 OMA:ISMEQAT Uniprot:F4I2G1
        Length = 616

 Score = 107 (42.7 bits), Expect = 4.8e-05, P = 4.8e-05
 Identities = 21/74 (28%), Positives = 41/74 (55%)

Query:     2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKN 61
             T + +A  +GH  ++   + H P   +L+++   N+ H   ++  +  +  LLK    K 
Sbjct:   289 TPIHMAAKEGHVRIIKEFLKHCPDSRELLNNQCQNIFHVAAIAGKSKVVKYLLKLDEGKR 348

Query:    62 LIDEKDVKGNTPLH 75
             +++E+D+ GNTPLH
Sbjct:   349 MMNEQDINGNTPLH 362


>TAIR|locus:2128781 [details] [associations]
            symbol:AT4G03460 "AT4G03460" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR002110
            PROSITE:PS50088 SMART:SM00248 EMBL:CP002687 Gene3D:1.25.40.20
            InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
            InterPro:IPR027001 PANTHER:PTHR24177 InterPro:IPR027002
            InterPro:IPR026961 PANTHER:PTHR24177:SF1 Pfam:PF13962
            IPI:IPI00536308 RefSeq:NP_192255.2 UniGene:At.54114
            ProteinModelPortal:F4JG84 SMR:F4JG84 PRIDE:F4JG84
            EnsemblPlants:AT4G03460.1 GeneID:827916 KEGG:ath:AT4G03460
            OMA:WMALISA Uniprot:F4JG84
        Length = 677

 Score = 101 (40.6 bits), Expect = 0.00024, P = 0.00024
 Identities = 24/74 (32%), Positives = 37/74 (50%)

Query:     6 VATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLT----VSLYAYELNCLLKDLLFKN 61
             +A   G+  ++  I+   P   +L+D    NVLH       + +  + L C  KD   + 
Sbjct:   356 MAVKYGYVKILKAILKRCPDALELLDRENQNVLHVAAKNGKIEVLKFILRCC-KDKNKEK 414

Query:    62 LIDEKDVKGNTPLH 75
             LI+E+D  GNTPLH
Sbjct:   415 LINEEDANGNTPLH 428


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.139   0.428    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       75        75   0.00091  102 3  11 22  0.36    29
                                                     29  0.47    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  535 (57 KB)
  Total size of DFA:  103 KB (2071 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.06u 0.14s 8.20t   Elapsed:  00:00:00
  Total cpu time:  8.06u 0.14s 8.20t   Elapsed:  00:00:00
  Start:  Tue May 21 00:00:27 2013   End:  Tue May 21 00:00:27 2013

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