Query 038825
Match_columns 75
No_of_seqs 123 out of 2246
Neff 11.9
Searched_HMMs 46136
Date Fri Mar 29 03:43:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038825.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038825hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412 26S proteasome regulat 99.9 3.2E-23 6.9E-28 99.8 4.2 69 2-74 74-143 (226)
2 KOG4412 26S proteasome regulat 99.9 1.1E-22 2.5E-27 97.9 4.1 71 1-75 107-177 (226)
3 KOG0509 Ankyrin repeat and DHH 99.8 1.9E-20 4E-25 102.5 5.3 70 2-75 114-183 (600)
4 PF13637 Ank_4: Ankyrin repeat 99.8 7.2E-19 1.6E-23 71.2 6.6 53 1-54 2-54 (54)
5 PF12796 Ank_2: Ankyrin repeat 99.8 1.2E-18 2.5E-23 76.8 7.2 63 1-67 27-89 (89)
6 KOG0512 Fetal globin-inducing 99.8 1.8E-19 3.8E-24 86.7 4.7 71 1-75 98-168 (228)
7 PHA02878 ankyrin repeat protei 99.8 6.6E-19 1.4E-23 96.0 6.6 71 1-75 169-239 (477)
8 PHA02743 Viral ankyrin protein 99.8 8.6E-19 1.9E-23 84.8 5.7 71 1-75 58-133 (166)
9 PHA02741 hypothetical protein; 99.8 1.6E-18 3.4E-23 84.1 6.5 72 1-75 61-137 (169)
10 PHA02884 ankyrin repeat protei 99.8 1.4E-18 3.1E-23 90.2 6.5 71 1-75 71-142 (300)
11 KOG4214 Myotrophin and similar 99.8 1.1E-18 2.3E-23 76.5 5.0 69 1-73 35-103 (117)
12 PHA02875 ankyrin repeat protei 99.8 1.3E-18 2.8E-23 93.5 6.4 71 1-75 103-173 (413)
13 PHA02791 ankyrin-like protein; 99.8 1.6E-18 3.4E-23 89.7 6.2 70 2-75 63-133 (284)
14 KOG4177 Ankyrin [Cell wall/mem 99.8 9.6E-19 2.1E-23 101.5 5.7 71 1-75 541-611 (1143)
15 KOG0509 Ankyrin repeat and DHH 99.8 7.7E-19 1.7E-23 96.3 4.6 70 2-75 80-150 (600)
16 PF12796 Ank_2: Ankyrin repeat 99.8 4.4E-18 9.6E-23 74.9 5.5 64 4-75 1-64 (89)
17 PHA02791 ankyrin-like protein; 99.8 4.5E-18 9.8E-23 88.0 6.2 69 1-75 31-99 (284)
18 PHA02874 ankyrin repeat protei 99.7 6.7E-18 1.4E-22 91.3 6.4 70 2-75 126-195 (434)
19 PHA02741 hypothetical protein; 99.7 1.1E-17 2.3E-22 81.2 5.9 71 1-75 22-103 (169)
20 PHA02859 ankyrin repeat protei 99.7 1.5E-17 3.3E-22 83.0 6.4 71 1-75 52-128 (209)
21 PHA02736 Viral ankyrin protein 99.7 2.4E-18 5.2E-23 82.3 3.2 72 1-75 56-131 (154)
22 PF13857 Ank_5: Ankyrin repeat 99.7 1.9E-18 4.1E-23 70.4 2.2 54 19-75 1-54 (56)
23 PHA02795 ankyrin-like protein; 99.7 1.2E-17 2.7E-22 89.9 5.7 70 2-75 190-259 (437)
24 KOG0514 Ankyrin repeat protein 99.7 1.3E-17 2.9E-22 87.5 5.6 72 1-75 341-412 (452)
25 KOG0195 Integrin-linked kinase 99.7 1.6E-17 3.4E-22 85.6 5.6 70 2-75 36-105 (448)
26 PHA03095 ankyrin-like protein; 99.7 1.8E-17 4E-22 90.1 6.2 71 1-75 48-122 (471)
27 KOG0508 Ankyrin repeat protein 99.7 1.9E-18 4.1E-23 93.1 2.3 70 2-75 119-188 (615)
28 PHA02874 ankyrin repeat protei 99.7 2.3E-17 4.9E-22 89.3 6.4 71 1-75 158-228 (434)
29 PHA02946 ankyin-like protein; 99.7 2.3E-17 4.9E-22 89.7 6.2 70 1-74 73-145 (446)
30 PHA03095 ankyrin-like protein; 99.7 2.4E-17 5.2E-22 89.6 6.1 71 1-75 223-295 (471)
31 PHA02875 ankyrin repeat protei 99.7 4.1E-17 9E-22 87.7 6.7 71 2-75 70-140 (413)
32 PHA02878 ankyrin repeat protei 99.7 5.2E-17 1.1E-21 88.7 6.4 71 1-75 202-274 (477)
33 PHA03100 ankyrin repeat protei 99.7 4.6E-17 1E-21 88.7 6.0 71 1-75 216-288 (480)
34 PLN03192 Voltage-dependent pot 99.7 5.5E-17 1.2E-21 93.1 6.6 46 1-47 559-604 (823)
35 PHA02859 ankyrin repeat protei 99.7 1.1E-16 2.3E-21 80.0 6.4 70 2-75 89-163 (209)
36 PHA02884 ankyrin repeat protei 99.7 1.3E-16 2.9E-21 82.9 6.2 70 2-75 35-109 (300)
37 PHA02716 CPXV016; CPX019; EVM0 99.7 1.4E-16 3.1E-21 90.4 6.1 71 1-75 178-252 (764)
38 PHA02946 ankyin-like protein; 99.7 1.7E-16 3.8E-21 86.3 6.3 70 2-75 39-110 (446)
39 PLN03192 Voltage-dependent pot 99.7 1.4E-16 3E-21 91.5 6.1 70 2-75 527-596 (823)
40 PHA03100 ankyrin repeat protei 99.7 1.3E-16 2.8E-21 87.0 5.6 70 2-75 108-181 (480)
41 KOG0195 Integrin-linked kinase 99.7 1.2E-16 2.5E-21 82.5 4.7 69 2-74 69-137 (448)
42 PHA02876 ankyrin repeat protei 99.6 5.6E-16 1.2E-20 87.6 6.2 71 1-74 376-480 (682)
43 PHA02716 CPXV016; CPX019; EVM0 99.6 8E-16 1.7E-20 87.5 6.6 71 1-75 318-404 (764)
44 PHA02798 ankyrin-like protein; 99.6 5E-16 1.1E-20 85.2 5.2 70 2-75 73-150 (489)
45 TIGR00870 trp transient-recept 99.6 2.8E-16 6E-21 89.5 4.2 71 1-75 129-213 (743)
46 KOG0510 Ankyrin repeat protein 99.6 6.1E-16 1.3E-20 87.5 5.5 72 1-75 342-415 (929)
47 KOG0502 Integral membrane anky 99.6 6.9E-16 1.5E-20 76.9 5.1 70 1-74 161-230 (296)
48 KOG0510 Ankyrin repeat protein 99.6 1.3E-15 2.9E-20 86.1 6.4 71 2-75 275-346 (929)
49 PHA02743 Viral ankyrin protein 99.6 4.3E-15 9.3E-20 72.0 7.3 68 1-72 95-163 (166)
50 PHA02730 ankyrin-like protein; 99.6 1.4E-15 3E-20 85.5 6.1 71 1-75 42-119 (672)
51 PHA02989 ankyrin repeat protei 99.6 1.7E-15 3.8E-20 83.2 6.1 72 1-75 182-294 (494)
52 PTZ00322 6-phosphofructo-2-kin 99.6 1.8E-15 3.9E-20 85.5 6.2 69 3-75 85-153 (664)
53 KOG0508 Ankyrin repeat protein 99.6 3.4E-16 7.3E-21 84.6 2.8 69 1-74 151-219 (615)
54 PHA02917 ankyrin-like protein; 99.6 3.4E-15 7.4E-20 84.3 6.2 59 13-75 432-490 (661)
55 PHA02798 ankyrin-like protein; 99.6 4.3E-15 9.4E-20 81.6 6.3 71 1-75 110-187 (489)
56 PHA02989 ankyrin repeat protei 99.6 5.6E-15 1.2E-19 81.2 6.1 70 2-75 71-150 (494)
57 PF13857 Ank_5: Ankyrin repeat 99.6 3.7E-15 8E-20 60.7 3.8 40 1-41 17-56 (56)
58 KOG3676 Ca2+-permeable cation 99.6 5.1E-15 1.1E-19 83.5 4.8 72 1-75 185-278 (782)
59 PHA02876 ankyrin repeat protei 99.6 1.9E-14 4E-19 81.6 6.5 70 2-75 147-216 (682)
60 KOG0512 Fetal globin-inducing 99.6 3E-14 6.5E-19 69.0 6.2 69 4-75 67-135 (228)
61 KOG0514 Ankyrin repeat protein 99.6 2.8E-15 6.2E-20 79.0 2.7 72 1-75 269-378 (452)
62 cd00204 ANK ankyrin repeats; 99.5 6.7E-14 1.5E-18 64.1 6.4 71 1-75 8-78 (126)
63 PHA02736 Viral ankyrin protein 99.5 8.1E-14 1.8E-18 66.7 6.7 60 1-64 93-153 (154)
64 COG0666 Arp FOG: Ankyrin repea 99.5 9.4E-14 2E-18 69.0 7.1 72 1-75 107-185 (235)
65 PHA02917 ankyrin-like protein; 99.5 2.6E-14 5.7E-19 80.8 5.6 71 1-75 137-234 (661)
66 PHA02792 ankyrin-like protein; 99.5 3.1E-14 6.7E-19 79.7 5.7 70 2-75 376-448 (631)
67 PTZ00322 6-phosphofructo-2-kin 99.5 1E-13 2.2E-18 78.6 7.5 73 1-74 116-192 (664)
68 KOG0505 Myosin phosphatase, re 99.5 3.1E-14 6.8E-19 77.5 4.8 69 2-74 200-268 (527)
69 PHA02795 ankyrin-like protein; 99.5 2.5E-13 5.4E-18 73.7 6.5 63 1-67 222-292 (437)
70 KOG0515 p53-interacting protei 99.5 9.1E-14 2E-18 76.4 4.9 65 7-75 557-621 (752)
71 KOG4177 Ankyrin [Cell wall/mem 99.5 1.2E-13 2.6E-18 81.0 5.2 69 3-75 510-578 (1143)
72 KOG4214 Myotrophin and similar 99.5 1.4E-13 3E-18 60.6 3.9 66 4-74 6-71 (117)
73 KOG0515 p53-interacting protei 99.5 3.1E-13 6.8E-18 74.3 5.9 68 2-73 585-653 (752)
74 KOG0505 Myosin phosphatase, re 99.4 2E-13 4.4E-18 74.5 4.8 69 2-74 75-143 (527)
75 KOG0502 Integral membrane anky 99.4 6.8E-14 1.5E-18 69.9 2.7 69 2-74 195-263 (296)
76 cd00204 ANK ankyrin repeats; 99.4 9.9E-13 2.2E-17 60.2 6.3 71 1-75 41-111 (126)
77 PF13637 Ank_4: Ankyrin repeat 99.4 7.4E-14 1.6E-18 56.4 2.0 39 34-75 1-39 (54)
78 PHA02730 ankyrin-like protein; 99.4 5E-13 1.1E-17 75.5 5.5 59 13-75 442-501 (672)
79 KOG1710 MYND Zn-finger and ank 99.4 1.8E-12 3.8E-17 67.1 5.5 70 1-73 46-115 (396)
80 KOG0507 CASK-interacting adapt 99.4 3.4E-13 7.4E-18 76.3 2.9 70 2-75 51-120 (854)
81 KOG0783 Uncharacterized conser 99.4 3.2E-13 6.9E-18 77.5 2.7 70 1-74 53-123 (1267)
82 COG0666 Arp FOG: Ankyrin repea 99.4 6.6E-12 1.4E-16 62.4 6.8 70 2-75 75-152 (235)
83 PF00023 Ank: Ankyrin repeat H 99.3 3.4E-12 7.4E-17 46.7 3.7 33 33-68 1-33 (33)
84 TIGR00870 trp transient-recept 99.3 5.4E-12 1.2E-16 72.4 5.6 74 1-75 176-262 (743)
85 KOG0506 Glutaminase (contains 99.3 1.6E-12 3.5E-17 70.7 3.3 69 3-74 509-577 (622)
86 KOG0818 GTPase-activating prot 99.3 7.7E-12 1.7E-16 68.5 5.7 69 3-74 136-204 (669)
87 PHA02792 ankyrin-like protein; 99.3 1.4E-11 3.1E-16 69.4 6.1 70 2-75 341-415 (631)
88 PF13606 Ank_3: Ankyrin repeat 99.3 8.7E-12 1.9E-16 44.6 3.2 28 34-64 2-29 (30)
89 KOG0782 Predicted diacylglycer 99.3 1.2E-11 2.7E-16 69.0 4.8 70 1-73 900-970 (1004)
90 KOG3676 Ca2+-permeable cation 99.3 2.5E-11 5.3E-16 69.2 6.0 69 2-74 242-312 (782)
91 PF13606 Ank_3: Ankyrin repeat 99.2 5.2E-11 1.1E-15 42.6 3.4 26 1-26 3-28 (30)
92 KOG0507 CASK-interacting adapt 99.2 1.3E-11 2.9E-16 70.1 2.2 70 1-74 83-152 (854)
93 KOG0705 GTPase-activating prot 99.1 1.4E-10 3E-15 64.7 5.3 58 1-62 662-719 (749)
94 PF00023 Ank: Ankyrin repeat H 99.1 1.9E-10 4.1E-15 41.9 3.8 30 1-31 3-32 (33)
95 KOG0511 Ankyrin repeat protein 99.0 3.1E-09 6.6E-14 57.2 6.3 64 4-71 40-103 (516)
96 KOG0522 Ankyrin repeat protein 99.0 3.5E-09 7.5E-14 58.6 6.0 54 1-55 56-109 (560)
97 KOG0521 Putative GTPase activa 98.8 3.6E-09 7.8E-14 61.4 3.2 71 1-75 657-727 (785)
98 KOG0522 Ankyrin repeat protein 98.8 7.4E-09 1.6E-13 57.4 3.6 70 3-75 23-93 (560)
99 KOG4369 RTK signaling protein 98.8 7E-09 1.5E-13 62.3 3.1 70 1-74 758-828 (2131)
100 KOG0506 Glutaminase (contains 98.8 4.3E-09 9.3E-14 57.9 2.1 56 1-56 540-595 (622)
101 KOG0818 GTPase-activating prot 98.8 3.5E-08 7.6E-13 54.8 5.2 53 2-55 169-221 (669)
102 KOG1710 MYND Zn-finger and ank 98.7 3.7E-08 8E-13 51.6 5.0 70 2-75 14-84 (396)
103 KOG2384 Major histocompatibili 98.6 9.3E-07 2E-11 44.0 6.5 56 1-56 13-68 (223)
104 KOG0705 GTPase-activating prot 98.5 5E-07 1.1E-11 51.2 4.9 67 6-75 630-699 (749)
105 KOG0783 Uncharacterized conser 98.3 1.4E-07 3.1E-12 55.3 0.1 56 17-75 35-91 (1267)
106 KOG2505 Ankyrin repeat protein 98.3 3.5E-06 7.5E-11 47.2 5.1 59 13-74 404-467 (591)
107 KOG4369 RTK signaling protein 98.2 1.5E-06 3.3E-11 53.0 2.7 61 2-66 859-921 (2131)
108 KOG2505 Ankyrin repeat protein 98.1 2.8E-06 6.1E-11 47.5 2.4 41 2-43 432-472 (591)
109 smart00248 ANK ankyrin repeats 97.9 2.8E-05 6.2E-10 26.1 3.2 23 34-56 2-24 (30)
110 smart00248 ANK ankyrin repeats 97.9 5.3E-05 1.2E-09 25.3 3.4 26 1-26 3-28 (30)
111 KOG0782 Predicted diacylglycer 97.7 5.9E-05 1.3E-09 43.4 3.4 68 6-75 872-939 (1004)
112 KOG0520 Uncharacterized conser 97.7 8.4E-06 1.8E-10 48.7 0.1 30 27-56 634-663 (975)
113 KOG2384 Major histocompatibili 97.6 6.6E-05 1.4E-09 37.6 2.7 44 27-73 5-49 (223)
114 KOG0520 Uncharacterized conser 97.6 2.2E-05 4.7E-10 47.1 1.1 71 1-75 575-646 (975)
115 KOG0521 Putative GTPase activa 97.3 0.00021 4.5E-09 42.6 2.2 42 31-75 653-694 (785)
116 KOG3609 Receptor-activated Ca2 97.2 0.0036 7.7E-08 37.6 6.1 61 3-66 91-160 (822)
117 KOG0511 Ankyrin repeat protein 96.4 0.0097 2.1E-07 33.2 3.9 36 2-38 71-106 (516)
118 PF11929 DUF3447: Domain of un 96.2 0.03 6.5E-07 24.0 5.1 47 3-57 9-55 (76)
119 KOG3609 Receptor-activated Ca2 94.8 0.047 1E-06 33.2 3.0 26 1-26 132-157 (822)
120 PF06128 Shigella_OspC: Shigel 94.7 0.26 5.6E-06 26.1 5.1 51 11-64 228-281 (284)
121 PF03158 DUF249: Multigene fam 94.2 0.36 7.8E-06 24.6 5.1 45 4-55 147-191 (192)
122 KOG1595 CCCH-type Zn-finger pr 90.5 0.024 5.3E-07 32.7 -1.9 69 1-72 59-128 (528)
123 KOG3836 HLH transcription fact 84.4 0.19 4.1E-06 29.8 -0.8 45 11-56 407-451 (605)
124 KOG4591 Uncharacterized conser 84.0 1.4 3.1E-05 23.0 2.2 41 2-42 224-268 (280)
125 cd03572 ENTH_epsin_related ENT 49.1 31 0.00068 16.5 3.5 43 13-56 37-80 (122)
126 KOG1709 Guanidinoacetate methy 44.3 36 0.00078 18.5 2.4 35 21-56 3-37 (271)
127 KOG4335 FERM domain-containing 39.2 20 0.00042 21.7 1.1 27 28-54 171-197 (558)
128 PF10273 WGG: Pre-rRNA-process 32.2 39 0.00084 14.9 1.3 12 1-12 13-24 (82)
129 PF12645 HTH_16: Helix-turn-he 30.2 54 0.0012 13.7 2.8 22 3-24 2-23 (65)
130 PF08035 Op_neuropeptide: Opio 28.9 31 0.00067 12.3 0.6 8 67-74 9-16 (31)
131 PF04840 Vps16_C: Vps16, C-ter 25.8 1.4E+02 0.003 17.0 4.4 50 5-54 8-62 (319)
132 COG3970 Fumarylacetoacetate (F 25.4 34 0.00074 19.5 0.6 15 60-74 218-232 (379)
133 TIGR00847 ccoS cytochrome oxid 21.1 48 0.001 13.3 0.5 8 5-12 23-30 (51)
No 1
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.88 E-value=3.2e-23 Score=99.82 Aligned_cols=69 Identities=28% Similarity=0.363 Sum_probs=27.5
Q ss_pred cHHHHHHHcCCHHHHHHHHhh-CCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISH-YPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
||||+|+..|+.++|+.|+.+ +++. +.....|.|+||||+-.+..++.++|++. |+.++.+|+.|+|||
T Consensus 74 tPlhia~s~g~~evVk~Ll~r~~adv-na~tn~G~T~LHyAagK~r~eIaqlLle~---ga~i~~kD~~~qtpl 143 (226)
T KOG4412|consen 74 TPLHIAASNGNDEVVKELLNRSGADV-NATTNGGQTCLHYAAGKGRLEIAQLLLEK---GALIRIKDKQGQTPL 143 (226)
T ss_pred chhhhhhhcCcHHHHHHHhcCCCCCc-ceecCCCcceehhhhcCChhhHHHHHHhc---CCCCcccccccCchh
Confidence 344444444444444444433 3332 33333344444444444444444444443 344444444444443
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.87 E-value=1.1e-22 Score=97.94 Aligned_cols=71 Identities=21% Similarity=0.258 Sum_probs=68.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||||+..|+.+++++|+..++.+ ..+|..|.||||-|+..|..+++++|+.. |+.+|.+|+.|.||||
T Consensus 107 ~T~LHyAagK~r~eIaqlLle~ga~i-~~kD~~~qtplHRAAavGklkvie~Li~~---~a~~n~qDk~G~TpL~ 177 (226)
T KOG4412|consen 107 QTCLHYAAGKGRLEIAQLLLEKGALI-RIKDKQGQTPLHRAAAVGKLKVIEYLISQ---GAPLNTQDKYGFTPLH 177 (226)
T ss_pred cceehhhhcCChhhHHHHHHhcCCCC-cccccccCchhHHHHhccchhhHHHHHhc---CCCCCcccccCccHHH
Confidence 58999999999999999999999887 89999999999999999999999999999 9999999999999997
No 3
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.82 E-value=1.9e-20 Score=102.48 Aligned_cols=70 Identities=31% Similarity=0.350 Sum_probs=60.8
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
||||+|+++|+..++..|++.|+++ ..+|.+|.+++|.|+..++...+-+++.. ++++|.+|.+|.||||
T Consensus 114 tPLHWAar~G~~~vv~lLlqhGAdp-t~~D~~G~~~lHla~~~~~~~~vayll~~---~~d~d~~D~~grTpLm 183 (600)
T KOG0509|consen 114 TPLHWAARNGHISVVDLLLQHGADP-TLKDKQGLTPLHLAAQFGHTALVAYLLSK---GADIDLRDNNGRTPLM 183 (600)
T ss_pred CcchHHHHcCcHHHHHHHHHcCCCC-ceecCCCCcHHHHHHHhCchHHHHHHHHh---cccCCCcCCCCCCHHH
Confidence 7888888888888888888888887 88888888888888888888888888888 8888888888888875
No 4
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.80 E-value=7.2e-19 Score=71.21 Aligned_cols=53 Identities=23% Similarity=0.277 Sum_probs=44.4
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHH
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLL 54 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~ 54 (75)
+||||+|+..|+.++++++++.+.++ +..|.+|+||||+|+..|+.+++++|+
T Consensus 2 ~t~lh~A~~~g~~~~~~~Ll~~~~di-n~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 2 RTPLHWAARSGNLEIVKLLLEHGADI-NAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SBHHHHHHHTT-HHHHHHHHHTTSGT-T-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred ChHHHHHHHhCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 68999999999999999999999887 778999999999999999999999885
No 5
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.79 E-value=1.2e-18 Score=76.81 Aligned_cols=63 Identities=19% Similarity=0.228 Sum_probs=47.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKD 67 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~ 67 (75)
+||||+|+..|+.+++++|++.+.++ +..+..|+||||+|+..++.+++++|++. |++++.+|
T Consensus 27 ~~~l~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~~n 89 (89)
T PF12796_consen 27 NTALHYAAENGNLEIVKLLLENGADI-NSQDKNGNTALHYAAENGNLEIVKLLLEH---GADVNIRN 89 (89)
T ss_dssp SBHHHHHHHTTTHHHHHHHHHTTTCT-T-BSTTSSBHHHHHHHTTHHHHHHHHHHT---TT-TTSS-
T ss_pred CCHHHHHHHcCCHHHHHHHHHhcccc-cccCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCCcC
Confidence 36788888888888888888887776 66777888888888888888888888877 77777654
No 6
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.79 E-value=1.8e-19 Score=86.70 Aligned_cols=71 Identities=23% Similarity=0.225 Sum_probs=67.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
.||||.|+++|+.++++.|+..+++. ..+...||||||.|+.-.+.+++..|+.. |++++++.+...||||
T Consensus 98 YTpLHRAaYn~h~div~~ll~~gAn~-~a~T~~GWTPLhSAckWnN~~va~~LLqh---gaDVnA~t~g~ltpLh 168 (228)
T KOG0512|consen 98 YTPLHRAAYNGHLDIVHELLLSGANK-EAKTNEGWTPLHSACKWNNFEVAGRLLQH---GADVNAQTKGLLTPLH 168 (228)
T ss_pred ccHHHHHHhcCchHHHHHHHHccCCc-ccccccCccchhhhhcccchhHHHHHHhc---cCcccccccccchhhH
Confidence 38999999999999999999999998 88999999999999999999999999999 9999999999999997
No 7
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.79 E-value=6.6e-19 Score=96.05 Aligned_cols=71 Identities=30% Similarity=0.313 Sum_probs=62.4
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|+..++++ +..+..|.||||.|+..++.+++++|++. |++++.+|..|.||||
T Consensus 169 ~tpLh~A~~~~~~~iv~~Ll~~gad~-n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~---ga~in~~d~~g~TpLh 239 (477)
T PHA02878 169 NTALHYATENKDQRLTELLLSYGANV-NIPDKTNNSPLHHAVKHYNKPIVHILLEN---GASTDARDKCGNTPLH 239 (477)
T ss_pred CCHHHHHHhCCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhCCHHHHHHHHHc---CCCCCCCCCCCCCHHH
Confidence 47899999999999999999888886 77888899999999999999999999988 8889988889999886
No 8
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.78 E-value=8.6e-19 Score=84.82 Aligned_cols=71 Identities=11% Similarity=0.061 Sum_probs=61.4
Q ss_pred CcHHHHHHHcCCHHH---HHHHHhhCCCcccccc-CCCchHHHHHHHhCcHHHHHHHHh-chhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASL---VGTIISHYPKCYDLVD-DTGWNVLHFLTVSLYAYELNCLLK-DLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~---~~~ll~~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~l~~-~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+. +++|+..+.++ +.++ ..|.||||+|+..++.+++++|+. . |++++.++..|.||||
T Consensus 58 ~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadi-n~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~---gad~~~~d~~g~tpL~ 133 (166)
T PHA02743 58 RQCTHMVAWYDRANAVMKIELLVNMGADI-NARELGTGNTLLHIAASTKNYELAEWLCRQL---GVNLGAINYQHETAYH 133 (166)
T ss_pred CcHHHHHHHhCccCHHHHHHHHHHcCCCC-CCCCCCCCCcHHHHHHHhCCHHHHHHHHhcc---CCCccCcCCCCCCHHH
Confidence 589999999887554 78999999887 7777 579999999999999999999985 6 8999999999999986
No 9
>PHA02741 hypothetical protein; Provisional
Probab=99.78 E-value=1.6e-18 Score=84.08 Aligned_cols=72 Identities=11% Similarity=0.075 Sum_probs=64.4
Q ss_pred CcHHHHHHHcCC----HHHHHHHHhhCCCccccccC-CCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGH----ASLVGTIISHYPKCYDLVDD-TGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~----~~~~~~ll~~~~~~~~~~~~-~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+ .+++++|+..++++ +..+. .|+||||+|+..++.+++++|+... |++++.+|..|.||||
T Consensus 61 ~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadi-n~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~--g~~~~~~n~~g~tpL~ 137 (169)
T PHA02741 61 QMCIHIAAEKHEAQLAAEIIDHLIELGADI-NAQEMLEGDTALHLAAHRRDHDLAEWLCCQP--GIDLHFCNADNKSPFE 137 (169)
T ss_pred CcHHHHHHHcCChHHHHHHHHHHHHcCCCC-CCCCcCCCCCHHHHHHHcCCHHHHHHHHhCC--CCCCCcCCCCCCCHHH
Confidence 589999999998 58889999999887 77774 8999999999999999999999743 8999999999999986
No 10
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.78 E-value=1.4e-18 Score=90.16 Aligned_cols=71 Identities=14% Similarity=0.056 Sum_probs=55.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccc-cCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLV-DDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~-~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
.||||+|+..++.++++.|+..|+++ +.. +..|.||||+|+..++.+++++|+.. |++++.+|..|.||||
T Consensus 71 ~TpLh~Aa~~~~~eivklLL~~GADV-N~~~~~~g~TpLh~Aa~~~~~eivklLL~~---GAdin~kd~~G~TpL~ 142 (300)
T PHA02884 71 TNPLIYAIDCDNDDAAKLLIRYGADV-NRYAEEAKITPLYISVLHGCLKCLEILLSY---GADINIQTNDMVTPIE 142 (300)
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCc-CcccCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCCCCCCCCCCCHHH
Confidence 37888888888888888888888776 553 45678888888888888888888888 8888888888888875
No 11
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.77 E-value=1.1e-18 Score=76.46 Aligned_cols=69 Identities=19% Similarity=0.043 Sum_probs=63.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTP 73 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tp 73 (75)
|+|||||+-.|+.+++++|+..++++ +.+|..|.|||-.|.+-|+.+|+++|+.+ |++.....-+|.+.
T Consensus 35 R~plhyAAD~GQl~ilefli~iGA~i-~~kDKygITPLLsAvwEGH~~cVklLL~~---GAdrt~~~PdG~~~ 103 (117)
T KOG4214|consen 35 RTPLHYAADYGQLSILEFLISIGANI-QDKDKYGITPLLSAVWEGHRDCVKLLLQN---GADRTIHAPDGTAL 103 (117)
T ss_pred cccchHhhhcchHHHHHHHHHhcccc-CCccccCCcHHHHHHHHhhHHHHHHHHHc---CcccceeCCCchhH
Confidence 68999999999999999999999998 89999999999999999999999999999 99887776666653
No 12
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.77 E-value=1.3e-18 Score=93.45 Aligned_cols=71 Identities=24% Similarity=0.288 Sum_probs=52.7
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 103 ~tpL~~A~~~~~~~iv~~Ll~~gad~-~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~---g~~~~~~d~~g~TpL~ 173 (413)
T PHA02875 103 MTPLHLATILKKLDIMKLLIARGADP-DIPNTDKFSPLHLAVMMGDIKGIELLIDH---KACLDIEDCCGCTPLI 173 (413)
T ss_pred CCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhc---CCCCCCCCCCCCCHHH
Confidence 36777777777777777777777766 66677777777777777777777777777 7777777777777765
No 13
>PHA02791 ankyrin-like protein; Provisional
Probab=99.77 E-value=1.6e-18 Score=89.66 Aligned_cols=70 Identities=16% Similarity=0.072 Sum_probs=39.3
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCC-CCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKG-NTPLH 75 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g-~tplh 75 (75)
||||+|+..|+.++++.|+..++++ +..+..|+||||+|+..++.+++++|++. |++++.++..| .||||
T Consensus 63 TpLh~Aa~~g~~eiV~lLL~~Gadv-n~~d~~G~TpLh~Aa~~g~~eivk~Ll~~---gadin~~~~~g~~TpL~ 133 (284)
T PHA02791 63 FPLHQAATLEDTKIVKILLFSGMDD-SQFDDKGNTALYYAVDSGNMQTVKLFVKK---NWRLMFYGKTGWKTSFY 133 (284)
T ss_pred CHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCcCccCCCCCcHHHH
Confidence 5555555555555555555555554 44555555666666655555666655555 55555555554 34543
No 14
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.77 E-value=9.6e-19 Score=101.46 Aligned_cols=71 Identities=30% Similarity=0.364 Sum_probs=68.4
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
.||||+|+..|+.++|++|++++++. +.++..|+||||.|+..|+.+|+.+|++. |+.+|..|.+|+||||
T Consensus 541 ~TpLh~A~~~g~v~~VkfLLe~gAdv-~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~---GA~vna~d~~g~TpL~ 611 (1143)
T KOG4177|consen 541 YTPLHVAVHYGNVDLVKFLLEHGADV-NAKDKLGYTPLHQAAQQGHNDIAELLLKH---GASVNAADLDGFTPLH 611 (1143)
T ss_pred cchHHHHHhcCCchHHHHhhhCCccc-cccCCCCCChhhHHHHcChHHHHHHHHHc---CCCCCcccccCcchhH
Confidence 38999999999999999999999998 88899999999999999999999999999 9999999999999986
No 15
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.76 E-value=7.7e-19 Score=96.30 Aligned_cols=70 Identities=26% Similarity=0.237 Sum_probs=65.9
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCcccccc-CCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVD-DTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
|+||+|+.+++.+++++|+++++++ +..+ .-+.||||||+.+|+..++.+|++. |++++.+|.+|.+|||
T Consensus 80 tlLHWAAiNNrl~v~r~li~~gadv-n~~gG~l~stPLHWAar~G~~~vv~lLlqh---GAdpt~~D~~G~~~lH 150 (600)
T KOG0509|consen 80 TLLHWAAINNRLDVARYLISHGADV-NAIGGVLGSTPLHWAARNGHISVVDLLLQH---GADPTLKDKQGLTPLH 150 (600)
T ss_pred cceeHHHHcCcHHHHHHHHHcCCCc-cccCCCCCCCcchHHHHcCcHHHHHHHHHc---CCCCceecCCCCcHHH
Confidence 6899999999999999999999998 6555 6688999999999999999999999 9999999999999998
No 16
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.75 E-value=4.4e-18 Score=74.94 Aligned_cols=64 Identities=25% Similarity=0.377 Sum_probs=58.0
Q ss_pred HHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 4 LLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 4 lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
||+|+..|+.++++++++.+.+. .. |.+|+|+|+..|+.+++++|++. |++++.+|..|.||||
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~-~~----~~~~l~~A~~~~~~~~~~~Ll~~---g~~~~~~~~~g~t~L~ 64 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADI-NL----GNTALHYAAENGNLEIVKLLLEN---GADINSQDKNGNTALH 64 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTT-TS----SSBHHHHHHHTTTHHHHHHHHHT---TTCTT-BSTTSSBHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCC-CC----CCCHHHHHHHcCCHHHHHHHHHh---cccccccCCCCCCHHH
Confidence 79999999999999999988665 32 88999999999999999999999 9999999999999986
No 17
>PHA02791 ankyrin-like protein; Provisional
Probab=99.75 E-value=4.5e-18 Score=87.96 Aligned_cols=69 Identities=25% Similarity=0.120 Sum_probs=63.4
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.++++.|+..+++. +.. .++||||+|+..++.+++++|+.. |++++.+|..|.||||
T Consensus 31 ~TpLh~Aa~~g~~eiv~~Ll~~ga~~-n~~--d~~TpLh~Aa~~g~~eiV~lLL~~---Gadvn~~d~~G~TpLh 99 (284)
T PHA02791 31 HSALYYAIADNNVRLVCTLLNAGALK-NLL--ENEFPLHQAATLEDTKIVKILLFS---GMDDSQFDDKGNTALY 99 (284)
T ss_pred CcHHHHHHHcCCHHHHHHHHHCcCCC-cCC--CCCCHHHHHHHCCCHHHHHHHHHC---CCCCCCCCCCCCCHHH
Confidence 58999999999999999999999876 443 468999999999999999999998 9999999999999987
No 18
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.75 E-value=6.7e-18 Score=91.30 Aligned_cols=70 Identities=23% Similarity=0.322 Sum_probs=47.3
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
||||+|+..|+.+++++|+..++++ +..+..|.||||+|+..++.+++++|++. |++++.++..|.||||
T Consensus 126 T~Lh~A~~~~~~~~v~~Ll~~gad~-n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~---g~~~n~~~~~g~tpL~ 195 (434)
T PHA02874 126 TFLHYAIKKGDLESIKMLFEYGADV-NIEDDNGCYPIHIAIKHNFFDIIKLLLEK---GAYANVKDNNGESPLH 195 (434)
T ss_pred cHHHHHHHCCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHCCcHHHHHHHHHC---CCCCCCCCCCCCCHHH
Confidence 6677777777777777777666665 55666666777776666666666666666 6666666666666664
No 19
>PHA02741 hypothetical protein; Provisional
Probab=99.74 E-value=1.1e-17 Score=81.19 Aligned_cols=71 Identities=18% Similarity=0.241 Sum_probs=61.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHhh------CCCccccccCCCchHHHHHHHhCc----HHHHHHHHhchhhhhccccCCC-C
Q 038825 1 MTALLVATSQGHASLVGTIISH------YPKCYDLVDDTGWNVLHFLTVSLY----AYELNCLLKDLLFKNLIDEKDV-K 69 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~------~~~~~~~~~~~~~~~l~~a~~~~~----~~~~~~l~~~~~~~~~~~~~~~-~ 69 (75)
+||||+|+..|+.++++.++.. +.++ +..|..|+||||+|+..++ .+++++|+.. |++++.++. .
T Consensus 22 ~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~i-n~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~---gadin~~~~~~ 97 (169)
T PHA02741 22 ENFFHEAARCGCFDIIARFTPFIRGDCHAAAL-NATDDAGQMCIHIAAEKHEAQLAAEIIDHLIEL---GADINAQEMLE 97 (169)
T ss_pred CCHHHHHHHcCCHHHHHHHHHHhccchhhhhh-hccCCCCCcHHHHHHHcCChHHHHHHHHHHHHc---CCCCCCCCcCC
Confidence 4899999999999999988542 3444 7789999999999999998 5788999998 999999985 8
Q ss_pred CCCCCC
Q 038825 70 GNTPLH 75 (75)
Q Consensus 70 g~tplh 75 (75)
|.||||
T Consensus 98 g~TpLh 103 (169)
T PHA02741 98 GDTALH 103 (169)
T ss_pred CCCHHH
Confidence 999997
No 20
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.74 E-value=1.5e-17 Score=82.97 Aligned_cols=71 Identities=18% Similarity=0.272 Sum_probs=46.2
Q ss_pred CcHHHHHHHcC--CHHHHHHHHhhCCCcccccc-CCCchHHHHHHHh---CcHHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 1 MTALLVATSQG--HASLVGTIISHYPKCYDLVD-DTGWNVLHFLTVS---LYAYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 1 ~t~lh~a~~~~--~~~~~~~ll~~~~~~~~~~~-~~~~~~l~~a~~~---~~~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
+||||+|+..+ +.+++++|++.++++ +..+ ..|+||||+|+.. ++.+++++|++. |++++.+|..|.|||
T Consensus 52 ~TpLh~a~~~~~~~~eiv~~Ll~~gadv-n~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~---gadin~~d~~G~TpL 127 (209)
T PHA02859 52 ETPIFSCLEKDKVNVEILKFLIENGADV-NFKTRDNNLSALHHYLSFNKNVEPEILKILIDS---GSSITEEDEDGKNLL 127 (209)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHCCCCC-CccCCCCCCCHHHHHHHhCccccHHHHHHHHHC---CCCCCCcCCCCCCHH
Confidence 36777776543 667777777777665 5444 3567777766542 356677777766 777777777777776
Q ss_pred C
Q 038825 75 H 75 (75)
Q Consensus 75 h 75 (75)
|
T Consensus 128 h 128 (209)
T PHA02859 128 H 128 (209)
T ss_pred H
Confidence 4
No 21
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.73 E-value=2.4e-18 Score=82.33 Aligned_cols=72 Identities=10% Similarity=-0.003 Sum_probs=61.1
Q ss_pred CcHHHHHHHcCCH---HHHHHHHhhCCCcccccc-CCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHA---SLVGTIISHYPKCYDLVD-DTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~---~~~~~ll~~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..++. ++++.|+..+.++ +.++ ..|+||||+|+..++.+++++|+... |++++.+|..|.||||
T Consensus 56 ~t~Lh~a~~~~~~~~~e~v~~Ll~~gadi-n~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~--g~d~n~~~~~g~tpL~ 131 (154)
T PHA02736 56 KQCVHIVSNPDKADPQEKLKLLMEWGADI-NGKERVFGNTPLHIAVYTQNYELATWLCNQP--GVNMEILNYAFKTPYY 131 (154)
T ss_pred CEEEEeecccCchhHHHHHHHHHHcCCCc-cccCCCCCCcHHHHHHHhCCHHHHHHHHhCC--CCCCccccCCCCCHHH
Confidence 4678888887765 4578889999887 7777 48999999999999999999999744 8999999999999986
No 22
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.73 E-value=1.9e-18 Score=70.41 Aligned_cols=54 Identities=28% Similarity=0.340 Sum_probs=31.0
Q ss_pred HHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 19 IISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 19 ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
|++.++...+..|..|.||||+|+..|+.+++++|+.. |++++.+|.+|.||||
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~---g~d~~~~d~~G~Tpl~ 54 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQN---GADPNAKDKDGQTPLH 54 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHC---T--TT---TTS--HHH
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHC---cCCCCCCcCCCCCHHH
Confidence 34555223478899999999999999999999999977 9999999999999985
No 23
>PHA02795 ankyrin-like protein; Provisional
Probab=99.73 E-value=1.2e-17 Score=89.95 Aligned_cols=70 Identities=16% Similarity=0.101 Sum_probs=65.8
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+++|.|...++.++++.|+..|+++ +..+..|.||||+|+..|+.+++++|++. |++++.+|..|.||||
T Consensus 190 t~l~~a~~~~~~eIve~LIs~GADI-N~kD~~G~TpLh~Aa~~g~~eiVelLL~~---GAdIN~~d~~G~TpLh 259 (437)
T PHA02795 190 TRGFLVDEPTVLEIYKLCIPYIEDI-NQLDAGGRTLLYRAIYAGYIDLVSWLLEN---GANVNAVMSNGYTCLD 259 (437)
T ss_pred chhHHHHhcCHHHHHHHHHhCcCCc-CcCCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCCCCcCCCCCCHHH
Confidence 5678888889999999999999987 88999999999999999999999999999 9999999999999997
No 24
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.73 E-value=1.3e-17 Score=87.51 Aligned_cols=72 Identities=26% Similarity=0.279 Sum_probs=69.0
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+|+|++|+.+|..++++.|+..++++ ++.|.+|.|+|+-|+.+|+.+++++|+..+ ++++...|.+|.|+|.
T Consensus 341 QTALMLAVSHGr~d~vk~LLacgAdV-NiQDdDGSTALMCA~EHGhkEivklLLA~p--~cd~sLtD~DgSTAl~ 412 (452)
T KOG0514|consen 341 QTALMLAVSHGRVDMVKALLACGADV-NIQDDDGSTALMCAAEHGHKEIVKLLLAVP--SCDISLTDVDGSTALS 412 (452)
T ss_pred chhhhhhhhcCcHHHHHHHHHccCCC-ccccCCccHHHhhhhhhChHHHHHHHhccC--cccceeecCCCchhhh
Confidence 58999999999999999999999998 999999999999999999999999999998 9999999999999873
No 25
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.73 E-value=1.6e-17 Score=85.60 Aligned_cols=70 Identities=24% Similarity=0.306 Sum_probs=55.5
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+|||+|+..|+..++++|+.+|+.+ +..+.-..+|||+|+.+|+.++++.|+.. .+++|+.+..|+||||
T Consensus 36 splhwaakegh~aivemll~rgarv-n~tnmgddtplhlaaahghrdivqkll~~---kadvnavnehgntplh 105 (448)
T KOG0195|consen 36 SPLHWAAKEGHVAIVEMLLSRGARV-NSTNMGDDTPLHLAAAHGHRDIVQKLLSR---KADVNAVNEHGNTPLH 105 (448)
T ss_pred chhhhhhhcccHHHHHHHHhccccc-ccccCCCCcchhhhhhcccHHHHHHHHHH---hcccchhhccCCCchh
Confidence 6788888888888888888888776 65555566888888888888888888887 7888888888888886
No 26
>PHA03095 ankyrin-like protein; Provisional
Probab=99.72 E-value=1.8e-17 Score=90.08 Aligned_cols=71 Identities=21% Similarity=0.278 Sum_probs=53.6
Q ss_pred CcHHHHHHHcC---CHHHHHHHHhhCCCccccccCCCchHHHHHHHhC-cHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQG---HASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSL-YAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~---~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~-~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..+ +.++++.|++.|+++ +..+..|.||||+|+..+ ..+++++|++. |++++.++..|.||||
T Consensus 48 ~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadi-n~~~~~g~TpLh~A~~~~~~~~iv~lLl~~---ga~in~~~~~g~tpLh 122 (471)
T PHA03095 48 KTPLHLYLHYSSEKVKDIVRLLLEAGADV-NAPERCGFTPLHLYLYNATTLDVIKLLIKA---GADVNAKDKVGRTPLH 122 (471)
T ss_pred CCHHHHHHHhcCCChHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCcHHHHHHHHHc---CCCCCCCCCCCCCHHH
Confidence 46777777776 777777777777776 666777777777777777 47777777777 7777777777777775
No 27
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.72 E-value=1.9e-18 Score=93.06 Aligned_cols=70 Identities=26% Similarity=0.315 Sum_probs=65.6
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
|||--||.-|+.+++++|+..++++ ++.++.|.|+||+|+..|+.+++++|++. |++++.++..|+|+||
T Consensus 119 tPLraACfDG~leivKyLvE~gad~-~IanrhGhTcLmIa~ykGh~~I~qyLle~---gADvn~ks~kGNTALH 188 (615)
T KOG0508|consen 119 TPLRAACFDGHLEIVKYLVEHGADP-EIANRHGHTCLMIACYKGHVDIAQYLLEQ---GADVNAKSYKGNTALH 188 (615)
T ss_pred ccHHHHHhcchhHHHHHHHHcCCCC-cccccCCCeeEEeeeccCchHHHHHHHHh---CCCcchhcccCchHHH
Confidence 7899999999999999999999998 88899999999999999999999999999 9999999999999987
No 28
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.72 E-value=2.3e-17 Score=89.26 Aligned_cols=71 Identities=20% Similarity=0.199 Sum_probs=64.2
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..++.+++++|+..+++. +..+..|.||||+|+..|+.+++++|++. |++++.++..|.||||
T Consensus 158 ~tpLh~A~~~~~~~iv~~Ll~~g~~~-n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~---g~~i~~~~~~g~TpL~ 228 (434)
T PHA02874 158 CYPIHIAIKHNFFDIIKLLLEKGAYA-NVKDNNGESPLHNAAEYGDYACIKLLIDH---GNHIMNKCKNGFTPLH 228 (434)
T ss_pred CCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhC---CCCCcCCCCCCCCHHH
Confidence 48999999999999999999999886 77889999999999999999999999998 8888888888888875
No 29
>PHA02946 ankyin-like protein; Provisional
Probab=99.72 E-value=2.3e-17 Score=89.67 Aligned_cols=70 Identities=20% Similarity=0.243 Sum_probs=43.2
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhC--cHHHHHHHHhchhhhhcccc-CCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSL--YAYELNCLLKDLLFKNLIDE-KDVKGNTPL 74 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~--~~~~~~~l~~~~~~~~~~~~-~~~~g~tpl 74 (75)
+||||+|+..|+.+++++|+..++++ +.+|..|+||||+|+..+ ..+++++|++. |++++. .+..|.|||
T Consensus 73 ~TpLh~Aa~~g~~eiv~lLL~~GAdi-n~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~---Gadin~~~d~~g~tpL 145 (446)
T PHA02946 73 NYPLHIASKINNNRIVAMLLTHGADP-NACDKQHKTPLYYLSGTDDEVIERINLLVQY---GAKINNSVDEEGCGPL 145 (446)
T ss_pred CCHHHHHHHcCCHHHHHHHHHCcCCC-CCCCCCCCCHHHHHHHcCCchHHHHHHHHHc---CCCcccccCCCCCcHH
Confidence 36666666666666666666666665 566666666666665543 25556666665 666553 355555555
No 30
>PHA03095 ankyrin-like protein; Provisional
Probab=99.72 E-value=2.4e-17 Score=89.63 Aligned_cols=71 Identities=23% Similarity=0.174 Sum_probs=63.8
Q ss_pred CcHHHHHHHcCCH--HHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHA--SLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~--~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..++. .+++.++..+.++ +..|..|+||||+|+..|+.+++++|++. |++++.+|.+|.||||
T Consensus 223 ~tpLh~Aa~~~~~~~~~v~~ll~~g~di-n~~d~~g~TpLh~A~~~~~~~~v~~LL~~---gad~n~~~~~g~tpl~ 295 (471)
T PHA03095 223 NTPLHSMATGSSCKRSLVLPLLIAGISI-NARNRYGQTPLHYAAVFNNPRACRRLIAL---GADINAVSSDGNTPLS 295 (471)
T ss_pred CCHHHHHHhcCCchHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCcccCCCCCCHHH
Confidence 5899999998864 5777888888887 88899999999999999999999999999 9999999999999985
No 31
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.72 E-value=4.1e-17 Score=87.71 Aligned_cols=71 Identities=20% Similarity=0.184 Sum_probs=56.6
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
||||+|+..|+.++++.|+..+.......+..|.||||+|+..++.+++++|++. |++++.++..|.||||
T Consensus 70 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~---gad~~~~~~~g~tpLh 140 (413)
T PHA02875 70 SELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIAR---GADPDIPNTDKFSPLH 140 (413)
T ss_pred cHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhC---CCCCCCCCCCCCCHHH
Confidence 5666666666666666666666544334466789999999999999999999999 9999999999999986
No 32
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.71 E-value=5.2e-17 Score=88.72 Aligned_cols=71 Identities=23% Similarity=0.164 Sum_probs=54.9
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHh-CcHHHHHHHHhchhhhhccccCCC-CCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVS-LYAYELNCLLKDLLFKNLIDEKDV-KGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~-~~~~~~~~l~~~~~~~~~~~~~~~-~g~tplh 75 (75)
+||||+|+..++.++++.|+..++++ +..+..|.||||+|+.. ++.+++++|++. |++++.++. .|.||||
T Consensus 202 ~tpLh~A~~~~~~~iv~~Ll~~ga~i-n~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~---gadvn~~~~~~g~TpLh 274 (477)
T PHA02878 202 NSPLHHAVKHYNKPIVHILLENGAST-DARDKCGNTPLHISVGYCKDYDILKLLLEH---GVDVNAKSYILGLTALH 274 (477)
T ss_pred CCHHHHHHHhCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHhcCCHHHHHHHHHc---CCCCCccCCCCCCCHHH
Confidence 47888888888888888888888776 77778888888888764 577888888877 777777665 6777765
No 33
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.70 E-value=4.6e-17 Score=88.73 Aligned_cols=71 Identities=23% Similarity=0.230 Sum_probs=66.9
Q ss_pred CcHHHHHHHcCC--HHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGH--ASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~--~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
.||||+|+..++ .+++++|+..|.++ +..|..|.||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 216 ~t~l~~a~~~~~~~~~iv~~Ll~~g~di-n~~d~~g~TpL~~A~~~~~~~iv~~Ll~~---gad~n~~d~~g~tpl~ 288 (480)
T PHA03100 216 ETPLHIAACYNEITLEVVNYLLSYGVPI-NIKDVYGFTPLHYAVYNNNPEFVKYLLDL---GANPNLVNKYGDTPLH 288 (480)
T ss_pred HhHHHHHHHhCcCcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCccCCCCCcHHH
Confidence 379999999999 99999999999887 88899999999999999999999999999 9999999999999985
No 34
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.70 E-value=5.5e-17 Score=93.09 Aligned_cols=46 Identities=22% Similarity=0.187 Sum_probs=27.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcH
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYA 47 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~ 47 (75)
+||||+|+..|+.++++.|+..++++ +..|..|+||||+|+..++.
T Consensus 559 ~TpLh~Aa~~g~~~~v~~Ll~~gadi-n~~d~~G~TpL~~A~~~g~~ 604 (823)
T PLN03192 559 RTPLHIAASKGYEDCVLVLLKHACNV-HIRDANGNTALWNAISAKHH 604 (823)
T ss_pred CCHHHHHHHcChHHHHHHHHhcCCCC-CCcCCCCCCHHHHHHHhCCH
Confidence 36666666666666666666666655 55566666666644443333
No 35
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.70 E-value=1.1e-16 Score=79.97 Aligned_cols=70 Identities=20% Similarity=0.179 Sum_probs=37.9
Q ss_pred cHHHHHHHc---CCHHHHHHHHhhCCCccccccCCCchHHHHHHH--hCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 2 TALLVATSQ---GHASLVGTIISHYPKCYDLVDDTGWNVLHFLTV--SLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~--~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
||||+|+.. ++.+++++|+..++++ +..+..|.||||.|+. .++.+++++|++. |++++.+|..|.||||
T Consensus 89 TpLh~a~~~~~~~~~eiv~~Ll~~gadi-n~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~---gadin~~d~~g~t~Lh 163 (209)
T PHA02859 89 SALHHYLSFNKNVEPEILKILIDSGSSI-TEEDEDGKNLLHMYMCNFNVRINVIKLLIDS---GVSFLNKDFDNNNILY 163 (209)
T ss_pred CHHHHHHHhCccccHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhccCCHHHHHHHHHc---CCCcccccCCCCcHHH
Confidence 555555432 2455555555555554 5555555555555543 2345555555555 5555555555555554
No 36
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.69 E-value=1.3e-16 Score=82.93 Aligned_cols=70 Identities=11% Similarity=0.046 Sum_probs=62.2
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccc----cCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCC-CCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLV----DDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKD-VKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~----~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~-~~g~tplh 75 (75)
++||.|+..++.++++.|++.|+++ +.. +..|.||||+|+..++.+++++|++. |++++.++ ..|.||||
T Consensus 35 ~lL~~A~~~~~~eivk~LL~~GAdi-N~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~---GADVN~~~~~~g~TpLh 109 (300)
T PHA02884 35 NILYSSIKFHYTDIIDAILKLGADP-EAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRY---GADVNRYAEEAKITPLY 109 (300)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCc-cccCcccCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCcCcccCCCCCCHHH
Confidence 4678888889999999999999987 554 46899999999999999999999999 99999864 57999986
No 37
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.68 E-value=1.4e-16 Score=90.42 Aligned_cols=71 Identities=14% Similarity=0.095 Sum_probs=64.2
Q ss_pred CcHHHHHHH--cCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCc--HHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATS--QGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLY--AYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~--~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~--~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+. .++.+++++|++.|+++ +..+..|.||||+|+..++ .+++++|++. |++++.++..|.||||
T Consensus 178 ~TpLH~A~~n~~~~~eIVklLLe~GADV-N~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~---GADVN~kD~~G~TPLh 252 (764)
T PHA02716 178 YGILHAYLGNMYVDIDILEWLCNNGVNV-NLQNNHLITPLHTYLITGNVCASVIKKIIEL---GGDMDMKCVNGMSPIM 252 (764)
T ss_pred CcHHHHHHHhccCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCCCHHHHHHHHHc---CCCCCCCCCCCCCHHH
Confidence 489998865 46789999999999987 8889999999999999985 5899999999 9999999999999986
No 38
>PHA02946 ankyin-like protein; Provisional
Probab=99.68 E-value=1.7e-16 Score=86.26 Aligned_cols=70 Identities=19% Similarity=0.086 Sum_probs=63.4
Q ss_pred cHHHHHHH--cCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 2 TALLVATS--QGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~--~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
++||.++. ..+.++++.|+..++++ +..|..|+||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 39 ~~Lh~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~G~TpLh~Aa~~g~~eiv~lLL~~---GAdin~~d~~g~TpLh 110 (446)
T PHA02946 39 HILHAYCGIKGLDERFVEELLHRGYSP-NETDDDGNYPLHIASKINNNRIVAMLLTH---GADPNACDKQHKTPLY 110 (446)
T ss_pred hHHHHHHHhcCCCHHHHHHHHHCcCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHC---cCCCCCCCCCCCCHHH
Confidence 57787653 44688999999999997 88999999999999999999999999999 9999999999999996
No 39
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.68 E-value=1.4e-16 Score=91.49 Aligned_cols=70 Identities=29% Similarity=0.369 Sum_probs=66.8
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
++|+.|+..|+.++++.+++.+.++ +..|..|+||||+|+..|+.+++++|++. |++++.+|.+|.||||
T Consensus 527 ~~L~~Aa~~g~~~~l~~Ll~~G~d~-n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~---gadin~~d~~G~TpL~ 596 (823)
T PLN03192 527 SNLLTVASTGNAALLEELLKAKLDP-DIGDSKGRTPLHIAASKGYEDCVLVLLKH---ACNVHIRDANGNTALW 596 (823)
T ss_pred hHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcChHHHHHHHHhc---CCCCCCcCCCCCCHHH
Confidence 5789999999999999999999997 88999999999999999999999999999 9999999999999986
No 40
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.68 E-value=1.3e-16 Score=86.98 Aligned_cols=70 Identities=29% Similarity=0.333 Sum_probs=46.2
Q ss_pred cHHHHHH--HcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhC--cHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 2 TALLVAT--SQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSL--YAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~--~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~--~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
||||+|+ ..|+.+++++|+..+++. +..+..|.+|||+|+..+ +.+++++|++. |++++.++..|.||||
T Consensus 108 tpL~~A~~~~~~~~~iv~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~---g~din~~d~~g~tpL~ 181 (480)
T PHA03100 108 TPLLYAISKKSNSYSIVEYLLDNGANV-NIKNSDGENLLHLYLESNKIDLKILKLLIDK---GVDINAKNRYGYTPLH 181 (480)
T ss_pred chhhHHHhcccChHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcCCChHHHHHHHHHC---CCCcccccCCCCCHHH
Confidence 5666666 666666666666666655 555666666666666666 66666666666 6666666666666664
No 41
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.67 E-value=1.2e-16 Score=82.46 Aligned_cols=69 Identities=26% Similarity=0.369 Sum_probs=66.8
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
||||+|+.+|+-++++.|+++.+++ +..+..|.+|||||+.-|+.++.+-|+.. |+.++.-++.|.|||
T Consensus 69 tplhlaaahghrdivqkll~~kadv-navnehgntplhyacfwgydqiaedli~~---ga~v~icnk~g~tpl 137 (448)
T KOG0195|consen 69 TPLHLAAAHGHRDIVQKLLSRKADV-NAVNEHGNTPLHYACFWGYDQIAEDLISC---GAAVNICNKKGMTPL 137 (448)
T ss_pred cchhhhhhcccHHHHHHHHHHhccc-chhhccCCCchhhhhhhcHHHHHHHHHhc---cceeeecccCCCCch
Confidence 7999999999999999999999997 89999999999999999999999999999 999999999999997
No 42
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.65 E-value=5.6e-16 Score=87.57 Aligned_cols=71 Identities=13% Similarity=0.164 Sum_probs=38.7
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCc---------------------------------cccccCCCchHHHHHHHhC-c
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKC---------------------------------YDLVDDTGWNVLHFLTVSL-Y 46 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~---------------------------------~~~~~~~~~~~l~~a~~~~-~ 46 (75)
+||||+|+..++.++++.|+..++++ .+..|..|+||||+|+..+ +
T Consensus 376 ~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~ 455 (682)
T PHA02876 376 KTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCK 455 (682)
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCc
Confidence 36666666666666666666555443 0334445555555555443 3
Q ss_pred HHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 47 AYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 47 ~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
.+++++|++. |++++.+|..|.|||
T Consensus 456 ~~iv~lLl~~---Gad~n~~d~~g~tpl 480 (682)
T PHA02876 456 LDVIEMLLDN---GADVNAINIQNQYPL 480 (682)
T ss_pred HHHHHHHHHC---CCCCCCCCCCCCCHH
Confidence 4555555555 555555555555554
No 43
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.65 E-value=8e-16 Score=87.50 Aligned_cols=71 Identities=20% Similarity=0.171 Sum_probs=57.6
Q ss_pred CcHHHHHHH--cCCHHHHHHHHhhCCCccccccCCCchHHHHHHH--------------hCcHHHHHHHHhchhhhhccc
Q 038825 1 MTALLVATS--QGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTV--------------SLYAYELNCLLKDLLFKNLID 64 (75)
Q Consensus 1 ~t~lh~a~~--~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~--------------~~~~~~~~~l~~~~~~~~~~~ 64 (75)
+||||+|+. .++.+++++|++.|+++ +..|..|+||||+|+. .++.+++++|++. |++++
T Consensus 318 ~TPLH~Aaa~~~~~~eIVklLLe~GADI-N~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~---GADIn 393 (764)
T PHA02716 318 RTCLHQYILRHNISTDIIKLLHEYGNDL-NEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISL---GADIT 393 (764)
T ss_pred CCHHHHHHHHhCCCchHHHHHHHcCCCC-ccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHC---CCCCC
Confidence 588888764 45788888888888876 7788888999988754 2577888888888 88899
Q ss_pred cCCCCCCCCCC
Q 038825 65 EKDVKGNTPLH 75 (75)
Q Consensus 65 ~~~~~g~tplh 75 (75)
.+|..|.||||
T Consensus 394 ~kn~~G~TPLh 404 (764)
T PHA02716 394 AVNCLGYTPLT 404 (764)
T ss_pred CcCCCCCChHH
Confidence 88989999886
No 44
>PHA02798 ankyrin-like protein; Provisional
Probab=99.64 E-value=5e-16 Score=85.19 Aligned_cols=70 Identities=19% Similarity=0.074 Sum_probs=39.9
Q ss_pred cHHHHHHHc-----CCHHHHHHHHhhCCCccccccCCCchHHHHHHHhC---cHHHHHHHHhchhhhhccccCCCCCCCC
Q 038825 2 TALLVATSQ-----GHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSL---YAYELNCLLKDLLFKNLIDEKDVKGNTP 73 (75)
Q Consensus 2 t~lh~a~~~-----~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~---~~~~~~~l~~~~~~~~~~~~~~~~g~tp 73 (75)
||||+++.. +..++++.|++.|+++ +..+..|+||||+|+..+ +.+++++|++. |++++.+|..|.||
T Consensus 73 TpL~~~~~n~~~~~~~~~iv~~Ll~~Gadi-N~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~---Gadvn~~d~~g~tp 148 (489)
T PHA02798 73 TPLCTILSNIKDYKHMLDIVKILIENGADI-NKKNSDGETPLYCLLSNGYINNLEILLFMIEN---GADTTLLDKDGFTM 148 (489)
T ss_pred ChHHHHHHhHHhHHhHHHHHHHHHHCCCCC-CCCCCCcCcHHHHHHHcCCcChHHHHHHHHHc---CCCccccCCCCCcH
Confidence 555555432 3455666666666554 555556666666665543 45556666665 66666666666666
Q ss_pred CC
Q 038825 74 LH 75 (75)
Q Consensus 74 lh 75 (75)
||
T Consensus 149 L~ 150 (489)
T PHA02798 149 LQ 150 (489)
T ss_pred HH
Confidence 54
No 45
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.64 E-value=2.8e-16 Score=89.48 Aligned_cols=71 Identities=23% Similarity=0.117 Sum_probs=64.2
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccc--------------cCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLV--------------DDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEK 66 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~--------------~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~ 66 (75)
+||||+|+..++.++++.|++.|+++ +.. ...|.+|||.|+..++.+++++|++. |++++.+
T Consensus 129 ~TpLhlAa~~~~~eiVklLL~~GAdv-~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~---gadin~~ 204 (743)
T TIGR00870 129 ITALHLAAHRQNYEIVKLLLERGASV-PARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSED---PADILTA 204 (743)
T ss_pred CcHHHHHHHhCCHHHHHHHHhCCCCC-CcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcC---CcchhhH
Confidence 48999999999999999999999886 432 23589999999999999999999999 9999999
Q ss_pred CCCCCCCCC
Q 038825 67 DVKGNTPLH 75 (75)
Q Consensus 67 ~~~g~tplh 75 (75)
|..|+||||
T Consensus 205 d~~g~T~Lh 213 (743)
T TIGR00870 205 DSLGNTLLH 213 (743)
T ss_pred hhhhhHHHH
Confidence 999999987
No 46
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.64 E-value=6.1e-16 Score=87.46 Aligned_cols=72 Identities=22% Similarity=0.284 Sum_probs=56.9
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccc--cccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYD--LVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~--~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||.|+..|+..+++.|+..|+...+ ..|.+|.|+||.|+..|+..+++.|+.+ |+++..+++.|.++++
T Consensus 342 ~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~---Ga~I~~~n~~g~SA~~ 415 (929)
T KOG0510|consen 342 MTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISH---GADIGVKNKKGKSAFD 415 (929)
T ss_pred CCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHc---CCceeecccccccccc
Confidence 5788888888888888888888877633 3477888888888888888888888888 8888888888877764
No 47
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.64 E-value=6.9e-16 Score=76.90 Aligned_cols=70 Identities=24% Similarity=0.294 Sum_probs=64.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
.|||.||+.+|+.+++++|+..|+++ ........++|..|+..|..+++++|+.+ +.++|..|.+|-|||
T Consensus 161 fTpLiWAaa~G~i~vV~fLL~~GAdp-~~lgk~resALsLAt~ggytdiV~lLL~r---~vdVNvyDwNGgTpL 230 (296)
T KOG0502|consen 161 FTPLIWAAAKGHIPVVQFLLNSGADP-DALGKYRESALSLATRGGYTDIVELLLTR---EVDVNVYDWNGGTPL 230 (296)
T ss_pred chHhHHHHhcCchHHHHHHHHcCCCh-hhhhhhhhhhHhHHhcCChHHHHHHHHhc---CCCcceeccCCCcee
Confidence 38999999999999999999999998 77778888999999999999999999999 899999999999997
No 48
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.63 E-value=1.3e-15 Score=86.13 Aligned_cols=71 Identities=27% Similarity=0.346 Sum_probs=55.4
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHh-chhhhhccccCCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLK-DLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~-~~~~~~~~~~~~~~g~tplh 75 (75)
||||+|++.|+++.++.|+..|.++ +.++.++.+|||.|+..|+.++++-|++ .. -..++..|-.|.||||
T Consensus 275 tpLH~a~r~G~~~svd~Ll~~Ga~I-~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~--~rllne~D~~g~tpLH 346 (929)
T KOG0510|consen 275 TPLHYAARQGGPESVDNLLGFGASI-NSKNKDEESPLHFAAIYGRINTVERLLQESD--TRLLNESDLHGMTPLH 346 (929)
T ss_pred chHHHHHHcCChhHHHHHHHcCCcc-cccCCCCCCchHHHHHcccHHHHHHHHhCcC--ccccccccccCCCchh
Confidence 7888888888888888888888887 7777788888888888888888877777 32 3467777777888876
No 49
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.63 E-value=4.3e-15 Score=71.99 Aligned_cols=68 Identities=13% Similarity=-0.005 Sum_probs=62.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHh-hCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIIS-HYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNT 72 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~-~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~t 72 (75)
+||||+|+..++.+++++|+. .+.++ ...+..|+||||+|+..++.+++++|+.. |++++.++..|..
T Consensus 95 ~TpLh~A~~~g~~~iv~~Ll~~~gad~-~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~---ga~~~~~~~~~~~ 163 (166)
T PHA02743 95 NTLLHIAASTKNYELAEWLCRQLGVNL-GAINYQHETAYHIAYKMRDRRMMEILRAN---GAVCDDPLSIGLS 163 (166)
T ss_pred CcHHHHHHHhCCHHHHHHHHhccCCCc-cCcCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCCcccCCcc
Confidence 489999999999999999995 67776 77899999999999999999999999999 9999999888764
No 50
>PHA02730 ankyrin-like protein; Provisional
Probab=99.63 E-value=1.4e-15 Score=85.48 Aligned_cols=71 Identities=13% Similarity=0.028 Sum_probs=61.4
Q ss_pred CcHHHHHHHcC---CHHHHHHHHhhCCCccccccCCCchHHHHHHHhC--cHHHHHHHHhchhhhhcc--ccCCCCCCCC
Q 038825 1 MTALLVATSQG---HASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSL--YAYELNCLLKDLLFKNLI--DEKDVKGNTP 73 (75)
Q Consensus 1 ~t~lh~a~~~~---~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~--~~~~~~~l~~~~~~~~~~--~~~~~~g~tp 73 (75)
+||||+|+..+ +.++++.|++.|+++ +.+|..|+||||+|+..+ +.+++++|++. |+.. +..+..+.+|
T Consensus 42 ~TaLh~A~~~~~~~~~eivklLLs~GAdi-n~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~---~~~~~~~~~~~~~d~~ 117 (672)
T PHA02730 42 NNALHCYVSNKCDTDIKIVRLLLSRGVER-LCRNNEGLTPLGVYSKRKYVKSQIVHLLISS---YSNASNELTSNINDFD 117 (672)
T ss_pred CcHHHHHHHcCCcCcHHHHHHHHhCCCCC-cccCCCCCChHHHHHHcCCCcHHHHHHHHhc---CCCCCcccccccCCch
Confidence 58999999987 599999999999998 889999999999999866 79999999998 6644 6667667777
Q ss_pred CC
Q 038825 74 LH 75 (75)
Q Consensus 74 lh 75 (75)
||
T Consensus 118 l~ 119 (672)
T PHA02730 118 LY 119 (672)
T ss_pred HH
Confidence 64
No 51
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.62 E-value=1.7e-15 Score=83.17 Aligned_cols=72 Identities=19% Similarity=0.161 Sum_probs=58.3
Q ss_pred CcHHHHHHHcC----CHHHHHHHHhhCCCc-------------------------------------cccccCCCchHHH
Q 038825 1 MTALLVATSQG----HASLVGTIISHYPKC-------------------------------------YDLVDDTGWNVLH 39 (75)
Q Consensus 1 ~t~lh~a~~~~----~~~~~~~ll~~~~~~-------------------------------------~~~~~~~~~~~l~ 39 (75)
+||||+|+..+ +.+++++|++.|+++ ++.+|..|+||||
T Consensus 182 ~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~ 261 (494)
T PHA02989 182 LTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLL 261 (494)
T ss_pred CChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHH
Confidence 36777776543 677888887777653 1334567999999
Q ss_pred HHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 40 FLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 40 ~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 262 ~Aa~~~~~~~v~~LL~~---Gadin~~d~~G~TpL~ 294 (494)
T PHA02989 262 ISAKVDNYEAFNYLLKL---GDDIYNVSKDGDTVLT 294 (494)
T ss_pred HHHHhcCHHHHHHHHHc---CCCccccCCCCCCHHH
Confidence 99999999999999999 9999999999999986
No 52
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.62 E-value=1.8e-15 Score=85.47 Aligned_cols=69 Identities=20% Similarity=0.134 Sum_probs=60.2
Q ss_pred HHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 3 ALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 3 ~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
.|+.|+..|+.+.++.|+..++++ +..|..|+||||+|+..|+.+++++|++. |++++.+|..|.||||
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadi-n~~d~~G~TpLh~Aa~~g~~eiv~~LL~~---Gadvn~~d~~G~TpLh 153 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADP-NCRDYDGRTPLHIACANGHVQVVRVLLEF---GADPTLLDKDGKTPLE 153 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcHHHHHHHCCCHHHHHHHHHC---CCCCCCCCCCCCCHHH
Confidence 477888889999999999888886 77888899999999999999999999988 8899999999999886
No 53
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.61 E-value=3.4e-16 Score=84.64 Aligned_cols=69 Identities=28% Similarity=0.293 Sum_probs=64.4
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
.|+||+||..|+.+++++|++.+++. +.++..|.|+||.++..|+.+++++|+.. |+.++. |..|-|||
T Consensus 151 hTcLmIa~ykGh~~I~qyLle~gADv-n~ks~kGNTALH~caEsG~vdivq~Ll~~---ga~i~~-d~~GmtPL 219 (615)
T KOG0508|consen 151 HTCLMIACYKGHVDIAQYLLEQGADV-NAKSYKGNTALHDCAESGSVDIVQLLLKH---GAKIDV-DGHGMTPL 219 (615)
T ss_pred CeeEEeeeccCchHHHHHHHHhCCCc-chhcccCchHHHhhhhcccHHHHHHHHhC---Cceeee-cCCCCchH
Confidence 47899999999999999999999998 99999999999999999999999999999 888884 66699997
No 54
>PHA02917 ankyrin-like protein; Provisional
Probab=99.60 E-value=3.4e-15 Score=84.32 Aligned_cols=59 Identities=15% Similarity=0.162 Sum_probs=55.4
Q ss_pred HHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 13 ASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 13 ~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
.++++.|+..++++ +.++..|+||||+|+..++.+++++|++. |++++.++..|.||||
T Consensus 432 ~~~v~~Ll~~GAdI-N~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~---GAdin~~d~~G~T~L~ 490 (661)
T PHA02917 432 LSTINICLPYLKDI-NMIDKRGETLLHKAVRYNKQSLVSLLLES---GSDVNIRSNNGYTCIA 490 (661)
T ss_pred HHHHHHHHHCCCCC-CCCCCCCcCHHHHHHHcCCHHHHHHHHHC---cCCCCCCCCCCCCHHH
Confidence 56779999999997 88999999999999999999999999999 9999999999999986
No 55
>PHA02798 ankyrin-like protein; Provisional
Probab=99.60 E-value=4.3e-15 Score=81.56 Aligned_cols=71 Identities=21% Similarity=0.243 Sum_probs=63.9
Q ss_pred CcHHHHHHHcC---CHHHHHHHHhhCCCccccccCCCchHHHHHHHhCc---HHHHHHHHhchhhhhccccCC-CCCCCC
Q 038825 1 MTALLVATSQG---HASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLY---AYELNCLLKDLLFKNLIDEKD-VKGNTP 73 (75)
Q Consensus 1 ~t~lh~a~~~~---~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~---~~~~~~l~~~~~~~~~~~~~~-~~g~tp 73 (75)
+||||+|+..+ +.+++++|++.|+++ +..+..|.||||+|+..++ .+++++|++. |++++.++ ..|.||
T Consensus 110 ~TpLh~a~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~---gadin~~~~~~~~t~ 185 (489)
T PHA02798 110 ETPLYCLLSNGYINNLEILLFMIENGADT-TLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEK---GVDINTHNNKEKYDT 185 (489)
T ss_pred CcHHHHHHHcCCcChHHHHHHHHHcCCCc-cccCCCCCcHHHHHHHcCCcchHHHHHHHHHh---CCCcccccCcCCCcH
Confidence 58999999875 789999999999997 8899999999999999887 8999999999 99999885 468888
Q ss_pred CC
Q 038825 74 LH 75 (75)
Q Consensus 74 lh 75 (75)
||
T Consensus 186 Lh 187 (489)
T PHA02798 186 LH 187 (489)
T ss_pred HH
Confidence 76
No 56
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.59 E-value=5.6e-15 Score=81.22 Aligned_cols=70 Identities=19% Similarity=0.164 Sum_probs=42.2
Q ss_pred cHHHHHHHcC------CHHHHHHHHhhCCCccccccCCCchHHHHHHHh---CcHHHHHHHHhchhhhhcc-ccCCCCCC
Q 038825 2 TALLVATSQG------HASLVGTIISHYPKCYDLVDDTGWNVLHFLTVS---LYAYELNCLLKDLLFKNLI-DEKDVKGN 71 (75)
Q Consensus 2 t~lh~a~~~~------~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~---~~~~~~~~l~~~~~~~~~~-~~~~~~g~ 71 (75)
||||.|+..+ +.++++.|++.|+++ +..+..|+|||+.|+.. ++.+++++|++. |+++ +.+|..|.
T Consensus 71 tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadi-n~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~---Gadin~~~d~~g~ 146 (494)
T PHA02989 71 TPLCAVLRNREITSNKIKKIVKLLLKFGADI-NLKTFNGVSPIVCFIYNSNINNCDMLRFLLSK---GINVNDVKNSRGY 146 (494)
T ss_pred CcHHHHHhccCcchhhHHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHhcccCcHHHHHHHHHC---CCCcccccCCCCC
Confidence 5666655432 345666666666665 55666666666655443 456666666666 6666 56666666
Q ss_pred CCCC
Q 038825 72 TPLH 75 (75)
Q Consensus 72 tplh 75 (75)
||||
T Consensus 147 tpLh 150 (494)
T PHA02989 147 NLLH 150 (494)
T ss_pred CHHH
Confidence 6664
No 57
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.58 E-value=3.7e-15 Score=60.67 Aligned_cols=40 Identities=25% Similarity=0.332 Sum_probs=27.9
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHH
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFL 41 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a 41 (75)
+||||+|+..|+.+++++|+..+.++ +.+|..|+||+++|
T Consensus 17 ~T~LH~A~~~g~~~~v~~Ll~~g~d~-~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 17 NTPLHWAARYGHSEVVRLLLQNGADP-NAKDKDGQTPLHYA 56 (56)
T ss_dssp --HHHHHHHHT-HHHHHHHHHCT--T-T---TTS--HHHH-
T ss_pred CcHHHHHHHcCcHHHHHHHHHCcCCC-CCCcCCCCCHHHhC
Confidence 48999999999999999999888887 89999999999987
No 58
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.57 E-value=5.1e-15 Score=83.50 Aligned_cols=72 Identities=24% Similarity=0.142 Sum_probs=63.3
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCcc--------ccc--------------cCCCchHHHHHHHhCcHHHHHHHHhchh
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCY--------DLV--------------DDTGWNVLHFLTVSLYAYELNCLLKDLL 58 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~--------~~~--------------~~~~~~~l~~a~~~~~~~~~~~l~~~~~ 58 (75)
+|+||+|+.+.+.++|..|+..++++. ... -..|..||.+||+.++++++++|++.
T Consensus 185 qSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~-- 262 (782)
T KOG3676|consen 185 QSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAH-- 262 (782)
T ss_pred cchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhc--
Confidence 489999999999999999999999861 011 13477899999999999999999998
Q ss_pred hhhccccCCCCCCCCCC
Q 038825 59 FKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 59 ~~~~~~~~~~~g~tplh 75 (75)
|++++++|.+|+|.||
T Consensus 263 -gAd~~aqDS~GNTVLH 278 (782)
T KOG3676|consen 263 -GADPNAQDSNGNTVLH 278 (782)
T ss_pred -CCCCCccccCCChHHH
Confidence 9999999999999987
No 59
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.56 E-value=1.9e-14 Score=81.56 Aligned_cols=70 Identities=11% Similarity=0.021 Sum_probs=64.8
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
++++.++..++.+++++|+..|.++ +..+..|+||||+|+..|+.+++++|++. |++++..+..|.||||
T Consensus 147 ~~l~~~i~~~~~~i~k~Ll~~Gadv-n~~d~~G~TpLh~Aa~~G~~~iv~~LL~~---Gad~n~~~~~g~t~L~ 216 (682)
T PHA02876 147 KLIKERIQQDELLIAEMLLEGGADV-NAKDIYCITPIHYAAERGNAKMVNLLLSY---GADVNIIALDDLSVLE 216 (682)
T ss_pred HHHHHHHHCCcHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHHC---CCCcCccCCCCCCHHH
Confidence 4577888999999999999999997 88899999999999999999999999999 9999999999999986
No 60
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.56 E-value=3e-14 Score=68.95 Aligned_cols=69 Identities=23% Similarity=0.217 Sum_probs=65.1
Q ss_pred HHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 4 LLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 4 lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+.+|+..+....|+.|++..++.++.+|.++.||||-|+.+|+.+++..|+.. |++++.++..|-||||
T Consensus 67 ~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~---gAn~~a~T~~GWTPLh 135 (228)
T KOG0512|consen 67 LLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLS---GANKEAKTNEGWTPLH 135 (228)
T ss_pred HHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHc---cCCcccccccCccchh
Confidence 45788899999999999999988899999999999999999999999999999 9999999999999997
No 61
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.55 E-value=2.8e-15 Score=78.97 Aligned_cols=72 Identities=19% Similarity=0.127 Sum_probs=59.4
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCcc-------------------------------------cc-ccCCCchHHHHHH
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCY-------------------------------------DL-VDDTGWNVLHFLT 42 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~-------------------------------------~~-~~~~~~~~l~~a~ 42 (75)
.|+|||++.++++++|+.|++.+-..+ +. -...|.|+|++|.
T Consensus 269 NTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~gQTALMLAV 348 (452)
T KOG0514|consen 269 NTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQHGQTALMLAV 348 (452)
T ss_pred CeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhhcchhhhhhh
Confidence 378999999999999999987654211 11 1345788888999
Q ss_pred HhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 43 VSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 43 ~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
.+|..++++.|+.. |+++|.+|.+|.|+|+
T Consensus 349 SHGr~d~vk~LLac---gAdVNiQDdDGSTALM 378 (452)
T KOG0514|consen 349 SHGRVDMVKALLAC---GADVNIQDDDGSTALM 378 (452)
T ss_pred hcCcHHHHHHHHHc---cCCCccccCCccHHHh
Confidence 99999999999999 9999999999999985
No 62
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.54 E-value=6.7e-14 Score=64.15 Aligned_cols=71 Identities=28% Similarity=0.395 Sum_probs=49.2
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..++.+++++++..+... ...+..|.++++.|+..+..+++++++.. +..++..+..|.||+|
T Consensus 8 ~t~l~~a~~~~~~~~i~~li~~~~~~-~~~~~~g~~~l~~a~~~~~~~~~~~ll~~---~~~~~~~~~~~~~~l~ 78 (126)
T cd00204 8 RTPLHLAASNGHLEVVKLLLENGADV-NAKDNDGRTPLHLAAKNGHLEIVKLLLEK---GADVNARDKDGNTPLH 78 (126)
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcCCHHHHHHHHHc---CCCccccCCCCCCHHH
Confidence 36777777777777777777777654 55666677777777777777777777776 6566666666666654
No 63
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.53 E-value=8.1e-14 Score=66.74 Aligned_cols=60 Identities=12% Similarity=-0.049 Sum_probs=54.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHhh-CCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccc
Q 038825 1 MTALLVATSQGHASLVGTIISH-YPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLID 64 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~ 64 (75)
+||||+|+..++.+++++|+.. +.++ +..+..|.||||+|+..++.+++++|+.. |++.+
T Consensus 93 ~T~Lh~A~~~~~~~i~~~Ll~~~g~d~-n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~---ga~~~ 153 (154)
T PHA02736 93 NTPLHIAVYTQNYELATWLCNQPGVNM-EILNYAFKTPYYVACERHDAKMMNILRAK---GAQCK 153 (154)
T ss_pred CcHHHHHHHhCCHHHHHHHHhCCCCCC-ccccCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCC
Confidence 5899999999999999999974 7776 88899999999999999999999999998 77654
No 64
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.53 E-value=9.4e-14 Score=69.01 Aligned_cols=72 Identities=21% Similarity=0.229 Sum_probs=66.7
Q ss_pred CcHHHHHHHcCC-----HHHHHHHHhhCC--CccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCC
Q 038825 1 MTALLVATSQGH-----ASLVGTIISHYP--KCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTP 73 (75)
Q Consensus 1 ~t~lh~a~~~~~-----~~~~~~ll~~~~--~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tp 73 (75)
.||+|+|+..++ .++++.++..+. +.....+..|.||+|+|+..++.++++++++. |++++..+..|.|+
T Consensus 107 ~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~---~~~~~~~~~~g~t~ 183 (235)
T COG0666 107 DTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEA---GADPNSRNSYGVTA 183 (235)
T ss_pred CcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhc---CCCCcccccCCCcc
Confidence 489999999999 999999999999 45467799999999999999999999999999 99999999999999
Q ss_pred CC
Q 038825 74 LH 75 (75)
Q Consensus 74 lh 75 (75)
++
T Consensus 184 l~ 185 (235)
T COG0666 184 LD 185 (235)
T ss_pred hh
Confidence 85
No 65
>PHA02917 ankyrin-like protein; Provisional
Probab=99.53 E-value=2.6e-14 Score=80.82 Aligned_cols=71 Identities=15% Similarity=0.145 Sum_probs=55.5
Q ss_pred CcHHHHHH--HcCCHHHHHHHHhhCCCcccccc---CCC-----------chHHHHHHH-----------hCcHHHHHHH
Q 038825 1 MTALLVAT--SQGHASLVGTIISHYPKCYDLVD---DTG-----------WNVLHFLTV-----------SLYAYELNCL 53 (75)
Q Consensus 1 ~t~lh~a~--~~~~~~~~~~ll~~~~~~~~~~~---~~~-----------~~~l~~a~~-----------~~~~~~~~~l 53 (75)
+||||.++ ..|+.+++++|++.|+++ +..+ ..| .||||+|+. .++.+++++|
T Consensus 137 ~T~L~~~~a~~~~~~eivklLi~~Ga~v-n~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~L 215 (661)
T PHA02917 137 RSVIENYVMTDDPVPEIIDLFIENGCSV-LYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCL 215 (661)
T ss_pred ccHHHHHHHccCCCHHHHHHHHHcCCCc-cccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHH
Confidence 58888543 468899999999998876 4333 223 599999875 3578899999
Q ss_pred HhchhhhhccccCCCCCCCCCC
Q 038825 54 LKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 54 ~~~~~~~~~~~~~~~~g~tplh 75 (75)
++. |++++.+|.+|.||||
T Consensus 216 i~~---Gadvn~~d~~G~TpLh 234 (661)
T PHA02917 216 INH---GIKPSSIDKNYCTALQ 234 (661)
T ss_pred HHC---CCCcccCCCCCCcHHH
Confidence 999 9999999999999986
No 66
>PHA02792 ankyrin-like protein; Provisional
Probab=99.53 E-value=3.1e-14 Score=79.71 Aligned_cols=70 Identities=16% Similarity=0.139 Sum_probs=58.4
Q ss_pred cHHHHHHHcCCH---HHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 2 TALLVATSQGHA---SLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~~~~---~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
||||+|+..... ++++.++..++++ +.+|..|+||||+|+..++.+++++|++. |++++.++..|.||||
T Consensus 376 TpLh~A~~n~~~~v~~IlklLIs~GADI-N~kD~~G~TPLh~Aa~~~n~eivelLLs~---GADIN~kD~~G~TpL~ 448 (631)
T PHA02792 376 MPLFPTLSIHESDVLSILKLCKPYIDDI-NKIDKHGRSILYYCIESHSVSLVEWLIDN---GADINITTKYGSTCIG 448 (631)
T ss_pred hHHHHHHHhccHhHHHHHHHHHhcCCcc-ccccccCcchHHHHHHcCCHHHHHHHHHC---CCCCCCcCCCCCCHHH
Confidence 678877665554 3567778888887 77888899999999999999999999998 9999999999999875
No 67
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.52 E-value=1e-13 Score=78.58 Aligned_cols=73 Identities=18% Similarity=0.253 Sum_probs=63.4
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhc----hhhhhccccCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKD----LLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~----~~~~~~~~~~~~~g~tpl 74 (75)
+||||+|+..|+.+++++|+..++++ +..|..|.||||+|+..++.+++++|+.. ...+++.+..+..|.+|+
T Consensus 116 ~TpLh~Aa~~g~~eiv~~LL~~Gadv-n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~ 192 (664)
T PTZ00322 116 RTPLHIACANGHVQVVRVLLEFGADP-TLLDKDGKTPLELAEENGFREVVQLLSRHSQCHFELGANAKPDSFTGKPPS 192 (664)
T ss_pred CcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHCCcHHHHHHHHhCCCcccccCCCCCccccCCCCcc
Confidence 58999999999999999999999987 88999999999999999999999999876 112566777777777765
No 68
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.51 E-value=3.1e-14 Score=77.52 Aligned_cols=69 Identities=26% Similarity=0.320 Sum_probs=66.4
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
|.||.|+..|..++...|+..+.+. ..+|.+||+|||.|+.-|..+.+++|+.+ |++++..+..|.||+
T Consensus 200 T~lHvAaa~Gy~e~~~lLl~ag~~~-~~~D~dgWtPlHAAA~Wg~~~~~elL~~~---ga~~d~~t~~g~~p~ 268 (527)
T KOG0505|consen 200 TALHVAAANGYTEVAALLLQAGYSV-NIKDYDGWTPLHAAAHWGQEDACELLVEH---GADMDAKTKMGETPL 268 (527)
T ss_pred hHHHHHHhhhHHHHHHHHHHhccCc-ccccccCCCcccHHHHhhhHhHHHHHHHh---hcccchhhhcCCCCc
Confidence 7899999999999999999999987 88999999999999999999999999999 999999999999997
No 69
>PHA02795 ankyrin-like protein; Provisional
Probab=99.48 E-value=2.5e-13 Score=73.72 Aligned_cols=63 Identities=22% Similarity=0.164 Sum_probs=56.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhC--------cHHHHHHHHhchhhhhccccCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSL--------YAYELNCLLKDLLFKNLIDEKD 67 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~--------~~~~~~~l~~~~~~~~~~~~~~ 67 (75)
+||||+|+..|+.+++++|++.|+++ +..+..|+||||+|+..| +.+++++|++. |++++...
T Consensus 222 ~TpLh~Aa~~g~~eiVelLL~~GAdI-N~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~---gadI~~~~ 292 (437)
T PHA02795 222 RTLLYRAIYAGYIDLVSWLLENGANV-NAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLRE---PLSIDCIK 292 (437)
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhC---CCCCCchh
Confidence 58999999999999999999999998 889999999999999988 46899999988 87776543
No 70
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.48 E-value=9.1e-14 Score=76.38 Aligned_cols=65 Identities=26% Similarity=0.270 Sum_probs=34.6
Q ss_pred HHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 7 ATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 7 a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
|+..|-+++|+.++..-.+. ..-+..|.|+||-|++.|+..++++|+.. |+++|..|.+|-||||
T Consensus 557 aaLeGEldlVq~~i~ev~Dp-SqpNdEGITaLHNAiCaghyeIVkFLi~~---ganVNa~DSdGWTPLH 621 (752)
T KOG0515|consen 557 AALEGELDLVQRIIYEVTDP-SQPNDEGITALHNAICAGHYEIVKFLIEF---GANVNAADSDGWTPLH 621 (752)
T ss_pred hhhcchHHHHHHHHHhhcCC-CCCCccchhHHhhhhhcchhHHHHHHHhc---CCcccCccCCCCchhh
Confidence 34445555555555544444 34444555555555555555555555555 5555555555555554
No 71
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.47 E-value=1.2e-13 Score=80.99 Aligned_cols=69 Identities=25% Similarity=0.334 Sum_probs=53.8
Q ss_pred HHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 3 ALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 3 ~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
++|.+...+...++..++..+... ...+..+.||||+|+..|+...+++|+++ |++++.++..|.||||
T Consensus 510 ~lhla~~~~~v~~~~~l~~~ga~v-~~~~~r~~TpLh~A~~~g~v~~VkfLLe~---gAdv~ak~~~G~TPLH 578 (1143)
T KOG4177|consen 510 PLHLAADEDTVKVAKILLEHGANV-DLRTGRGYTPLHVAVHYGNVDLVKFLLEH---GADVNAKDKLGYTPLH 578 (1143)
T ss_pred hhhhhhhhhhHHHHHHHhhcCCce-ehhcccccchHHHHHhcCCchHHHHhhhC---CccccccCCCCCChhh
Confidence 344444444444444444444444 56678889999999999999999999999 9999999999999998
No 72
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.46 E-value=1.4e-13 Score=60.58 Aligned_cols=66 Identities=21% Similarity=0.140 Sum_probs=58.2
Q ss_pred HHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 4 LLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 4 lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
+.|++.+|..+-|+..+..+.+. +. -..|++|||+|+-+|+..++++|+.. |++++.+|+.|-|||
T Consensus 6 ~~W~vkNG~~DeVk~~v~~g~nV-n~-~~ggR~plhyAAD~GQl~ilefli~i---GA~i~~kDKygITPL 71 (117)
T KOG4214|consen 6 VAWNVKNGEIDEVKQSVNEGLNV-NE-IYGGRTPLHYAADYGQLSILEFLISI---GANIQDKDKYGITPL 71 (117)
T ss_pred HhhhhccCcHHHHHHHHHccccH-HH-HhCCcccchHhhhcchHHHHHHHHHh---ccccCCccccCCcHH
Confidence 56888999999999888888654 43 23789999999999999999999999 999999999999997
No 73
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.46 E-value=3.1e-13 Score=74.35 Aligned_cols=68 Identities=22% Similarity=0.239 Sum_probs=59.3
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCC-CCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKD-VKGNTP 73 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~-~~g~tp 73 (75)
|+||-|+.-||.++|++|+..+.+. +..|.+||||||-|+.+++..+++.|++. |+.+-+.+ .++.|+
T Consensus 585 TaLHNAiCaghyeIVkFLi~~ganV-Na~DSdGWTPLHCAASCNnv~~ckqLVe~---GaavfAsTlSDmeTa 653 (752)
T KOG0515|consen 585 TALHNAICAGHYEIVKFLIEFGANV-NAADSDGWTPLHCAASCNNVPMCKQLVES---GAAVFASTLSDMETA 653 (752)
T ss_pred hHHhhhhhcchhHHHHHHHhcCCcc-cCccCCCCchhhhhhhcCchHHHHHHHhc---cceEEeeecccccch
Confidence 7899999999999999999999997 88999999999999999999999999999 66554433 345554
No 74
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.45 E-value=2e-13 Score=74.46 Aligned_cols=69 Identities=22% Similarity=0.325 Sum_probs=64.6
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
|+||.++.-.+.+++++++.+++++ +..|..+|||+|.|+.+++..++.+|+.. |+++...+.+|..|+
T Consensus 75 Talhq~~id~~~e~v~~l~e~ga~V-n~~d~e~wtPlhaaascg~~~i~~~li~~---gA~~~avNsdg~~P~ 143 (527)
T KOG0505|consen 75 TALHQACIDDNLEMVKFLVENGANV-NAQDNEGWTPLHAAASCGYLNIVEYLIQH---GANLLAVNSDGNMPY 143 (527)
T ss_pred hhHHHHHhcccHHHHHHHHHhcCCc-cccccccCCcchhhcccccHHHHHHHHHh---hhhhhhccCCCCCcc
Confidence 7899999999999999999999997 88999999999999999999999999999 999988888888875
No 75
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.45 E-value=6.8e-14 Score=69.94 Aligned_cols=69 Identities=19% Similarity=0.193 Sum_probs=65.2
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
++|.+|++.|..+++++|+.++.++ +.-|.+|-|||-+|+..++.+|++.|+.. |++++..+..|.+++
T Consensus 195 sALsLAt~ggytdiV~lLL~r~vdV-NvyDwNGgTpLlyAvrgnhvkcve~Ll~s---GAd~t~e~dsGy~~m 263 (296)
T KOG0502|consen 195 SALSLATRGGYTDIVELLLTREVDV-NVYDWNGGTPLLYAVRGNHVKCVESLLNS---GADVTQEDDSGYWIM 263 (296)
T ss_pred hhHhHHhcCChHHHHHHHHhcCCCc-ceeccCCCceeeeeecCChHHHHHHHHhc---CCCcccccccCCcHH
Confidence 6899999999999999999999998 88899999999999999999999999999 999999999998875
No 76
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.44 E-value=9.9e-13 Score=60.23 Aligned_cols=71 Identities=27% Similarity=0.366 Sum_probs=64.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
.+|+|+|+..++.++++.++..+... ...+..+.+++|+|+..++.+++++|+.. +.+++..+..|.||++
T Consensus 41 ~~~l~~a~~~~~~~~~~~ll~~~~~~-~~~~~~~~~~l~~a~~~~~~~~~~~L~~~---~~~~~~~~~~~~~~l~ 111 (126)
T cd00204 41 RTPLHLAAKNGHLEIVKLLLEKGADV-NARDKDGNTPLHLAARNGNLDVVKLLLKH---GADVNARDKDGRTPLH 111 (126)
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCcHHHHHHHHHc---CCCCcccCCCCCCHHH
Confidence 37999999999999999999998765 66778899999999999999999999998 8888989999999874
No 77
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.43 E-value=7.4e-14 Score=56.40 Aligned_cols=39 Identities=33% Similarity=0.410 Sum_probs=32.4
Q ss_pred CchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 34 GWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 34 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
|+|++|+|+..|+.+++++|++. |.+++.+|.+|.||||
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~---~~din~~d~~g~t~lh 39 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEH---GADINAQDEDGRTPLH 39 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHT---TSGTT-B-TTS--HHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHC---CCCCCCCCCCCCCHHH
Confidence 68999999999999999999999 9999999999999986
No 78
>PHA02730 ankyrin-like protein; Provisional
Probab=99.43 E-value=5e-13 Score=75.52 Aligned_cols=59 Identities=12% Similarity=0.080 Sum_probs=54.4
Q ss_pred HHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCC-CCCCCCC
Q 038825 13 ASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDV-KGNTPLH 75 (75)
Q Consensus 13 ~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~tplh 75 (75)
.+++++|+..++++ +.+|..|.||||+|+..++.+++++|++. |++++.++. .|.||||
T Consensus 442 ~~ivk~LIs~GADI-NakD~~G~TPLh~Aa~~~~~eive~LI~~---GAdIN~~d~~~g~TaL~ 501 (672)
T PHA02730 442 IDVFDILSKYMDDI-DMIDNENKTLLYYAVDVNNIQFARRLLEY---GASVNTTSRSIINTAIQ 501 (672)
T ss_pred HHHHHHHHhcccch-hccCCCCCCHHHHHHHhCCHHHHHHHHHC---CCCCCCCCCcCCcCHHH
Confidence 35689999999997 88999999999999999999999999999 999999997 5999985
No 79
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.38 E-value=1.8e-12 Score=67.14 Aligned_cols=70 Identities=21% Similarity=0.160 Sum_probs=63.4
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTP 73 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tp 73 (75)
+++|..|+..|+.++++.++..++++....+..+.||||+|+.+|+.++.++|++. |+.....|.-|.|+
T Consensus 46 Ms~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrlllda---Ga~~~~vNsvgrTA 115 (396)
T KOG1710|consen 46 MSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDA---GARMYLVNSVGRTA 115 (396)
T ss_pred ccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhc---cCccccccchhhhH
Confidence 58999999999999999999999998555678899999999999999999999999 99888888888774
No 80
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.38 E-value=3.4e-13 Score=76.26 Aligned_cols=70 Identities=23% Similarity=0.302 Sum_probs=57.4
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
|.||.|+.+|+.++++.+++..+-. ..+|..|.+|||+|+|.|+.+++++++.. +..++..+..|.||||
T Consensus 51 Talhha~Lng~~~is~llle~ea~l-dl~d~kg~~plhlaaw~g~~e~vkmll~q---~d~~na~~~e~~tplh 120 (854)
T KOG0507|consen 51 TLLHHAVLNGQNQISKLLLDYEALL-DLCDTKGILPLHLAAWNGNLEIVKMLLLQ---TDILNAVNIENETPLH 120 (854)
T ss_pred hHHHHHHhcCchHHHHHHhcchhhh-hhhhccCcceEEehhhcCcchHHHHHHhc---ccCCCcccccCcCccc
Confidence 6788888888888888888777654 66778888888888888888888888888 7788888888888887
No 81
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=99.38 E-value=3.2e-13 Score=77.47 Aligned_cols=70 Identities=26% Similarity=0.268 Sum_probs=64.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCcccccc-CCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVD-DTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
||+||+++..+..+++++|+..|.++ ...| ..|+||||-|...|+.+|+..|++. |..+..+|++|..||
T Consensus 53 R~alH~~~S~~k~~~l~wLlqhGidv-~vqD~ESG~taLHRaiyyG~idca~lLL~~---g~SL~i~Dkeglspl 123 (1267)
T KOG0783|consen 53 RTALHIAVSENKNSFLRWLLQHGIDV-FVQDEESGYTALHRAIYYGNIDCASLLLSK---GRSLRIKDKEGLSPL 123 (1267)
T ss_pred cceeeeeeccchhHHHHHHHhcCcee-eeccccccchHhhHhhhhchHHHHHHHHhc---CCceEEecccCCCHH
Confidence 68899999999999999999999987 5445 5699999999999999999999999 999999999999987
No 82
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.36 E-value=6.6e-12 Score=62.39 Aligned_cols=70 Identities=26% Similarity=0.325 Sum_probs=65.1
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCc-----HHHHHHHHhchhhhh---ccccCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLY-----AYELNCLLKDLLFKN---LIDEKDVKGNTP 73 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~-----~~~~~~l~~~~~~~~---~~~~~~~~g~tp 73 (75)
++++.++..+...++..++..+.++ +..+..|.|++|+|+..++ .++++.|++. |+ ..+.+|..|.||
T Consensus 75 ~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~---g~~~~~~~~~~~~g~tp 150 (235)
T COG0666 75 LPLHSAASKGDDKIVKLLLASGADV-NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEA---GADLDVNNLRDEDGNTP 150 (235)
T ss_pred CHHHHHHHcCcHHHHHHHHHcCCCc-ccccCCCCcHHHHHHhcCCcccchHHHHHHHHHc---CCCCCCccccCCCCCch
Confidence 6789999999999999999999998 8999999999999999999 9999999999 77 777779999999
Q ss_pred CC
Q 038825 74 LH 75 (75)
Q Consensus 74 lh 75 (75)
||
T Consensus 151 l~ 152 (235)
T COG0666 151 LH 152 (235)
T ss_pred hH
Confidence 96
No 83
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=99.34 E-value=3.4e-12 Score=46.66 Aligned_cols=33 Identities=24% Similarity=0.218 Sum_probs=26.4
Q ss_pred CCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCC
Q 038825 33 TGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDV 68 (75)
Q Consensus 33 ~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~ 68 (75)
+|.||||+|+..++.+++++|++. |++++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~---ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKH---GADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHT---TSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHC---cCCCCCCCC
Confidence 477888888888888888888887 888887763
No 84
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.32 E-value=5.4e-12 Score=72.38 Aligned_cols=74 Identities=23% Similarity=0.146 Sum_probs=59.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhC---------cHHHHHHHHhchhhhhcc----ccCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSL---------YAYELNCLLKDLLFKNLI----DEKD 67 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~---------~~~~~~~l~~~~~~~~~~----~~~~ 67 (75)
++|||+|+..++.++++.+++.++++ +..|..|+|++|+|+..+ ...+.++++.....+.+. +..|
T Consensus 176 ~tpL~~Aa~~~~~~iv~lLl~~gadi-n~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N 254 (743)
T TIGR00870 176 ESPLNAAACLGSPSIVALLSEDPADI-LTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILN 254 (743)
T ss_pred ccHHHHHHHhCCHHHHHHHhcCCcch-hhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcC
Confidence 47999999999999999999999887 888999999999999876 334566666652112333 6679
Q ss_pred CCCCCCCC
Q 038825 68 VKGNTPLH 75 (75)
Q Consensus 68 ~~g~tplh 75 (75)
.+|.||||
T Consensus 255 ~~g~TPL~ 262 (743)
T TIGR00870 255 HQGLTPLK 262 (743)
T ss_pred CCCCCchh
Confidence 99999986
No 85
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=99.32 E-value=1.6e-12 Score=70.75 Aligned_cols=69 Identities=23% Similarity=0.178 Sum_probs=64.6
Q ss_pred HHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 3 ALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 3 ~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
.+.+|++.|..+.++.+.-.+.+. ..+|.+.+|+||+|+.-|+..++++|++.. +.+++.+|..|+|||
T Consensus 509 ~~~~aa~~GD~~alrRf~l~g~D~-~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~--kv~~~~kDRw~rtPl 577 (622)
T KOG0506|consen 509 NVMYAAKNGDLSALRRFALQGMDL-ETKDYDDRTALHVAAAEGHVEVVKFLLNAC--KVDPDPKDRWGRTPL 577 (622)
T ss_pred hhhhhhhcCCHHHHHHHHHhcccc-cccccccchhheeecccCceeHHHHHHHHH--cCCCChhhccCCCcc
Confidence 578999999999999888888887 889999999999999999999999999987 889999999999998
No 86
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=99.32 E-value=7.7e-12 Score=68.54 Aligned_cols=69 Identities=16% Similarity=0.093 Sum_probs=63.5
Q ss_pred HHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 3 ALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 3 ~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
-||-+++.|+.++.-.|+..|++........|.||||.|+..|+...+++|+-+ |+++...|.+|.||+
T Consensus 136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vY---GAD~~a~d~~GmtP~ 204 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVY---GADPGAQDSSGMTPV 204 (669)
T ss_pred HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhc---cCCCCCCCCCCCcHH
Confidence 478899999999999999999998555667899999999999999999999999 999999999999996
No 87
>PHA02792 ankyrin-like protein; Provisional
Probab=99.29 E-value=1.4e-11 Score=69.40 Aligned_cols=70 Identities=14% Similarity=-0.052 Sum_probs=58.9
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCC--chHHHHHHHhCcHH---HHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTG--WNVLHFLTVSLYAY---ELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~--~~~l~~a~~~~~~~---~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
..++.|+..++.+++++|++.|+++ +..|..| .+|||.|+...... +++++++. |++++.+|..|.||||
T Consensus 341 n~~~~Aa~~gn~eIVelLIs~GADI-N~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~---GADIN~kD~~G~TPLh 415 (631)
T PHA02792 341 NKYFQKFDNRDPKVVEYILKNGNVV-VEDDDNIINIMPLFPTLSIHESDVLSILKLCKPY---IDDINKIDKHGRSILY 415 (631)
T ss_pred hHHHHHHHcCCHHHHHHHHHcCCch-hhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhc---CCccccccccCcchHH
Confidence 3578899999999999999999997 7677664 69999877665543 57888888 9999999999999997
No 88
>PF13606 Ank_3: Ankyrin repeat
Probab=99.28 E-value=8.7e-12 Score=44.64 Aligned_cols=28 Identities=18% Similarity=0.152 Sum_probs=17.7
Q ss_pred CchHHHHHHHhCcHHHHHHHHhchhhhhccc
Q 038825 34 GWNVLHFLTVSLYAYELNCLLKDLLFKNLID 64 (75)
Q Consensus 34 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~ 64 (75)
|+||||+|+..|+.+++++|++. |+++|
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~---gadvn 29 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEH---GADVN 29 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHc---CCCCC
Confidence 56666666666666666666666 55554
No 89
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=99.26 E-value=1.2e-11 Score=69.00 Aligned_cols=70 Identities=27% Similarity=0.363 Sum_probs=64.2
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCc-cccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKC-YDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTP 73 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~-~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tp 73 (75)
++.||+|+..|+-++++++++.++.. +...|..|.|+||-|+..++..+.++|++. |+.+...|..|.||
T Consensus 900 ~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvda---gasl~ktd~kg~tp 970 (1004)
T KOG0782|consen 900 CSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDA---GASLRKTDSKGKTP 970 (1004)
T ss_pred hhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhc---chhheecccCCCCh
Confidence 36799999999999999999999864 456788999999999999999999999999 99999999999998
No 90
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.26 E-value=2.5e-11 Score=69.17 Aligned_cols=69 Identities=22% Similarity=0.278 Sum_probs=65.4
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhc--cccCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNL--IDEKDVKGNTPL 74 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~~~~~~g~tpl 74 (75)
.||.+|+..++.+++++|++.++++ +..|..|.|.||..+.+-..++..++++. |+. ...+|++|-|||
T Consensus 242 yPLSfAAC~nq~eivrlLl~~gAd~-~aqDS~GNTVLH~lVi~~~~~My~~~L~~---ga~~l~~v~N~qgLTPL 312 (782)
T KOG3676|consen 242 YPLSFAACTNQPEIVRLLLAHGADP-NAQDSNGNTVLHMLVIHFVTEMYDLALEL---GANALEHVRNNQGLTPL 312 (782)
T ss_pred CchHHHHHcCCHHHHHHHHhcCCCC-CccccCCChHHHHHHHHHHHHHHHHHHhc---CCCccccccccCCCChH
Confidence 5899999999999999999999998 89999999999999999889999999999 887 889999999997
No 91
>PF13606 Ank_3: Ankyrin repeat
Probab=99.19 E-value=5.2e-11 Score=42.59 Aligned_cols=26 Identities=27% Similarity=0.378 Sum_probs=24.3
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCc
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKC 26 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~ 26 (75)
+||||+|++.|+.+++++|++.++++
T Consensus 3 ~T~Lh~A~~~g~~e~v~~Ll~~gadv 28 (30)
T PF13606_consen 3 NTPLHLAASNGNIEIVKYLLEHGADV 28 (30)
T ss_pred CCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence 69999999999999999999998875
No 92
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.18 E-value=1.3e-11 Score=70.09 Aligned_cols=70 Identities=17% Similarity=0.078 Sum_probs=60.9
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
.+|||+|++.|+.+++++++..... .+.....|.+|||.|+..++.+.+.+|+.. |++.=.+|..+.|+|
T Consensus 83 ~~plhlaaw~g~~e~vkmll~q~d~-~na~~~e~~tplhlaaqhgh~dvv~~Ll~~---~adp~i~nns~~t~l 152 (854)
T KOG0507|consen 83 ILPLHLAAWNGNLEIVKMLLLQTDI-LNAVNIENETPLHLAAQHGHLEVVFYLLKK---NADPFIRNNSKETVL 152 (854)
T ss_pred cceEEehhhcCcchHHHHHHhcccC-CCcccccCcCccchhhhhcchHHHHHHHhc---CCCccccCcccccHH
Confidence 3689999999999999999988844 488888999999999999999999999999 888888888888875
No 93
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=99.15 E-value=1.4e-10 Score=64.69 Aligned_cols=58 Identities=21% Similarity=0.123 Sum_probs=54.3
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhc
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNL 62 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~ 62 (75)
+|+||+|++.|++.+.+.|+.++.+. ...|..|+|+|.||...|..+|+..|+.. |+.
T Consensus 662 rt~LHLa~~~gnVvl~QLLiWyg~dv-~~rda~g~t~l~yar~a~sqec~d~llq~---gcp 719 (749)
T KOG0705|consen 662 RTALHLAARKGNVVLAQLLIWYGVDV-MARDAHGRTALFYARQAGSQECIDVLLQY---GCP 719 (749)
T ss_pred cchhhhhhhhcchhHHHHHHHhCccc-eecccCCchhhhhHhhcccHHHHHHHHHc---CCC
Confidence 68999999999999999999999987 88999999999999999999999999998 654
No 94
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=99.13 E-value=1.9e-10 Score=41.95 Aligned_cols=30 Identities=27% Similarity=0.386 Sum_probs=26.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCcccccc
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVD 31 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~ 31 (75)
+||||+|+..|+.+++++|++.++++ +.++
T Consensus 3 ~TpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d 32 (33)
T PF00023_consen 3 NTPLHYAAQRGHPDIVKLLLKHGADI-NARD 32 (33)
T ss_dssp BBHHHHHHHTTCHHHHHHHHHTTSCT-TCBC
T ss_pred ccHHHHHHHHHHHHHHHHHHHCcCCC-CCCC
Confidence 58999999999999999999999887 5443
No 95
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.00 E-value=3.1e-09 Score=57.19 Aligned_cols=64 Identities=16% Similarity=0.156 Sum_probs=57.7
Q ss_pred HHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCC
Q 038825 4 LLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGN 71 (75)
Q Consensus 4 lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~ 71 (75)
|..||+.|..+.++.|+..|..+ +.+|....+||.+|+.+||...+++|+++ |+..+.-.-+|.
T Consensus 40 lceacR~GD~d~v~~LVetgvnV-N~vD~fD~spL~lAsLcGHe~vvklLLen---GAiC~rdtf~G~ 103 (516)
T KOG0511|consen 40 LCEACRAGDVDRVRYLVETGVNV-NAVDRFDSSPLYLASLCGHEDVVKLLLEN---GAICSRDTFDGD 103 (516)
T ss_pred HHHHhhcccHHHHHHHHHhCCCc-chhhcccccHHHHHHHcCcHHHHHHHHHc---CCcccccccCcc
Confidence 67899999999999999999887 89999999999999999999999999999 887776655554
No 96
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.97 E-value=3.5e-09 Score=58.59 Aligned_cols=54 Identities=20% Similarity=0.306 Sum_probs=38.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHh
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLK 55 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~ 55 (75)
+||||+|+..|+...+..|+..++++ ...+..||++||-|+..|+.+++..++.
T Consensus 56 ~TpLhlAV~Lg~~~~a~~Ll~a~Adv-~~kN~~gWs~L~EAv~~g~~q~i~~vlr 109 (560)
T KOG0522|consen 56 RTPLHLAVRLGHVEAARILLSAGADV-SIKNNEGWSPLHEAVSTGNEQIITEVLR 109 (560)
T ss_pred CccHHHHHHhcCHHHHHHHHhcCCCc-cccccccccHHHHHHHcCCHHHHHHHHH
Confidence 46777777777777777777777765 6677777777777777777766655554
No 97
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.83 E-value=3.6e-09 Score=61.41 Aligned_cols=71 Identities=25% Similarity=0.253 Sum_probs=66.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
.++||.|+..++.-.++.|+..++++ +..|..|.+|+|.+...|+......++++ |++.++.+.+|.+||.
T Consensus 657 ~s~lh~a~~~~~~~~~e~ll~~ga~v-n~~d~~g~~plh~~~~~g~~~~~~~ll~~---~a~~~a~~~~~~~~l~ 727 (785)
T KOG0521|consen 657 CSLLHVAVGTGDSGAVELLLQNGADV-NALDSKGRTPLHHATASGHTSIACLLLKR---GADPNAFDPDGKLPLD 727 (785)
T ss_pred cchhhhhhccchHHHHHHHHhcCCcc-hhhhccCCCcchhhhhhcccchhhhhccc---cccccccCccCcchhh
Confidence 37899999999999999999999996 99999999999999999999999999998 9999999999999874
No 98
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.80 E-value=7.4e-09 Score=57.35 Aligned_cols=70 Identities=20% Similarity=0.183 Sum_probs=57.4
Q ss_pred HHHHHHHcCCHHHH-HHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 3 ALLVATSQGHASLV-GTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 3 ~lh~a~~~~~~~~~-~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
|+|+++.....+-. +.+.......+...|..|.||||.|+.-|+...++.|+.. |+++..+|.+|-+|||
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a---~Adv~~kN~~gWs~L~ 93 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSA---GADVSIKNNEGWSPLH 93 (560)
T ss_pred ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhc---CCCccccccccccHHH
Confidence 48888887665544 4444443333477899999999999999999999999999 9999999999999986
No 99
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.77 E-value=7e-09 Score=62.26 Aligned_cols=70 Identities=21% Similarity=0.200 Sum_probs=62.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccC-CCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEK-DVKGNTPL 74 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~tpl 74 (75)
.|+|..||..|+.|.++.++.+|+++ ..+|..|.+||-.|+..|+...++.|+.. .++++.+ |+.+.|+|
T Consensus 758 ~t~LT~acaggh~e~vellv~rgani-ehrdkkgf~plImaatagh~tvV~~llk~---ha~veaQsdrtkdt~l 828 (2131)
T KOG4369|consen 758 KTNLTSACAGGHREEVELLVVRGANI-EHRDKKGFVPLIMAATAGHITVVQDLLKA---HADVEAQSDRTKDTML 828 (2131)
T ss_pred cccccccccCccHHHHHHHHHhcccc-cccccccchhhhhhcccCchHHHHHHHhh---hhhhhhhcccccCceE
Confidence 36889999999999999999999987 88999999999999999999999999998 8888875 55677775
No 100
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.77 E-value=4.3e-09 Score=57.93 Aligned_cols=56 Identities=23% Similarity=0.116 Sum_probs=50.9
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhc
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKD 56 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~ 56 (75)
||+||.|+-.|+.+++++|+..+....+.+|.+|++||.-|...++.+++++|.+.
T Consensus 540 RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v~k~L~~~ 595 (622)
T KOG0506|consen 540 RTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEVVKLLEEA 595 (622)
T ss_pred chhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHHHHHHHHH
Confidence 68999999999999999999776655578999999999999999999999999875
No 101
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.75 E-value=3.5e-08 Score=54.77 Aligned_cols=53 Identities=15% Similarity=0.064 Sum_probs=49.0
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHh
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLK 55 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~ 55 (75)
||||.|++.|+..-+++|+-+|+++ ...|.+|.||+.+|...||-++.+-|++
T Consensus 169 TpLHvAAk~Gq~~Q~ElL~vYGAD~-~a~d~~GmtP~~~AR~~gH~~laeRl~e 221 (669)
T KOG0818|consen 169 TPLHVAAKAGQILQAELLAVYGADP-GAQDSSGMTPVDYARQGGHHELAERLVE 221 (669)
T ss_pred chhHHHHhccchhhhhHHhhccCCC-CCCCCCCCcHHHHHHhcCchHHHHHHHH
Confidence 8999999999999999999999998 8889999999999999999888776665
No 102
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.75 E-value=3.7e-08 Score=51.63 Aligned_cols=70 Identities=20% Similarity=0.171 Sum_probs=58.6
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccC-CCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEK-DVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~tplh 75 (75)
+||.-+.-.+..+-+..|++..... +.+|..|.++|..|+..|+.+++++|++. |+++|-. +..+.||||
T Consensus 14 ~~Lle~i~Kndt~~a~~LLs~vr~v-n~~D~sGMs~LahAaykGnl~~v~lll~~---gaDvN~~qhg~~YTpLm 84 (396)
T KOG1710|consen 14 SPLLEAIDKNDTEAALALLSTVRQV-NQRDPSGMSVLAHAAYKGNLTLVELLLEL---GADVNDKQHGTLYTPLM 84 (396)
T ss_pred hHHHHHHccCcHHHHHHHHHHhhhh-hccCCCcccHHHHHHhcCcHHHHHHHHHh---CCCcCcccccccccHHH
Confidence 4666677778888888887765554 78899999999999999999999999999 9999874 456889986
No 103
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.56 E-value=9.3e-07 Score=43.96 Aligned_cols=56 Identities=14% Similarity=0.188 Sum_probs=51.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhc
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKD 56 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~ 56 (75)
||+++.|+.-|+.+.+.+|+.++.......|..+..++.+|-..|...+++.|.+.
T Consensus 13 WTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 13 WTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred chHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence 79999999999999999999999544488899999999999999999999999886
No 104
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.48 E-value=5e-07 Score=51.15 Aligned_cols=67 Identities=15% Similarity=0.079 Sum_probs=52.9
Q ss_pred HHHHcCCHHHHHHHHhhCCCc---cccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 6 VATSQGHASLVGTIISHYPKC---YDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 6 ~a~~~~~~~~~~~ll~~~~~~---~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
-|+.-.+...+..|+..+... ...-+.+|+|+||+|+..|+..+.++|+-. |.++..+|.+|+|+|.
T Consensus 630 ~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWy---g~dv~~rda~g~t~l~ 699 (749)
T KOG0705|consen 630 RAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWY---GVDVMARDAHGRTALF 699 (749)
T ss_pred HHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHh---CccceecccCCchhhh
Confidence 344455566667777766543 123456789999999999999999999999 9999999999999973
No 105
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.29 E-value=1.4e-07 Score=55.32 Aligned_cols=56 Identities=23% Similarity=0.179 Sum_probs=48.9
Q ss_pred HHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCC-CCCCCCC
Q 038825 17 GTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDV-KGNTPLH 75 (75)
Q Consensus 17 ~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~tplh 75 (75)
.++.+.+....+++|..|+++||.++..+...++++|+.. |.++..+|. .|.||||
T Consensus 35 ~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqh---Gidv~vqD~ESG~taLH 91 (1267)
T KOG0783|consen 35 GFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQH---GIDVFVQDEESGYTALH 91 (1267)
T ss_pred HHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhc---CceeeeccccccchHhh
Confidence 3444555555688999999999999999999999999999 999999998 5999998
No 106
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.28 E-value=3.5e-06 Score=47.15 Aligned_cols=59 Identities=15% Similarity=0.120 Sum_probs=44.8
Q ss_pred HHHHHHHHhhCCCcc-----ccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 13 ASLVGTIISHYPKCY-----DLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 13 ~~~~~~ll~~~~~~~-----~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
...+++|.....+.. ...+..-.|+||+|+..|...++.++++. |+++..+|..|.||.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Lee---g~Dp~~kd~~Grtpy 467 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEE---GCDPSTKDGAGRTPY 467 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHh---cCCchhcccCCCCcc
Confidence 445566655554431 12344467899999999999999999999 999999999999985
No 107
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.19 E-value=1.5e-06 Score=52.95 Aligned_cols=61 Identities=20% Similarity=0.185 Sum_probs=38.8
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccc--cCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLV--DDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEK 66 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~--~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~ 66 (75)
|||.+|..-|..++++.++..|.++ +.+ ...|..||+.|..+|+......|+.. |.++|.+
T Consensus 859 tPlsla~Sggy~~iI~~llS~GseI-nSrtgSklgisPLmlatmngh~~at~~ll~~---gsdiNaq 921 (2131)
T KOG4369|consen 859 TPLSLARSGGYTKIIHALLSSGSEI-NSRTGSKLGISPLMLATMNGHQAATLSLLQP---GSDINAQ 921 (2131)
T ss_pred CchhhhcCcchHHHHHHHhhccccc-ccccccccCcchhhhhhhccccHHHHHHhcc---cchhccc
Confidence 5666777777777777777777665 322 23466677777777776666666666 5555553
No 108
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.09 E-value=2.8e-06 Score=47.47 Aligned_cols=41 Identities=20% Similarity=0.096 Sum_probs=38.3
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHH
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTV 43 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~ 43 (75)
|+||+|+..|..+++.+++..+.++ ..+|..|+||..++..
T Consensus 432 T~LH~aa~qg~~k~v~~~Leeg~Dp-~~kd~~Grtpy~ls~n 472 (591)
T KOG2505|consen 432 TFLHYAAAQGARKCVKYFLEEGCDP-STKDGAGRTPYSLSAN 472 (591)
T ss_pred hHHHHHHhcchHHHHHHHHHhcCCc-hhcccCCCCccccccc
Confidence 7899999999999999999999988 8899999999998873
No 109
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.94 E-value=2.8e-05 Score=26.06 Aligned_cols=23 Identities=22% Similarity=0.185 Sum_probs=12.2
Q ss_pred CchHHHHHHHhCcHHHHHHHHhc
Q 038825 34 GWNVLHFLTVSLYAYELNCLLKD 56 (75)
Q Consensus 34 ~~~~l~~a~~~~~~~~~~~l~~~ 56 (75)
+.+++++++..++.++++.++..
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~ 24 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDK 24 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHc
Confidence 34555555555555555555544
No 110
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.87 E-value=5.3e-05 Score=25.33 Aligned_cols=26 Identities=19% Similarity=0.270 Sum_probs=22.7
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCc
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKC 26 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~ 26 (75)
.||+|+|+..++.++++.++..+.++
T Consensus 3 ~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 3 RTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 47999999999999999999887643
No 111
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=97.71 E-value=5.9e-05 Score=43.43 Aligned_cols=68 Identities=16% Similarity=0.108 Sum_probs=49.2
Q ss_pred HHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 6 VATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 6 ~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
.|+..+.+--++..-..+.+. -..+.+..+.||+|+..|+-+++++++.... ...+++.|..|+|+||
T Consensus 872 ~av~~~D~~klqE~h~~gg~l-l~~~~~~~sllh~a~~tg~~eivkyildh~p-~elld~~de~get~lh 939 (1004)
T KOG0782|consen 872 RAVLSSDLMKLQETHLNGGSL-LIQGPDHCSLLHYAAKTGNGEIVKYILDHGP-SELLDMADETGETALH 939 (1004)
T ss_pred HHHHhccHHHHHHHHhcCCce-EeeCcchhhHHHHHHhcCChHHHHHHHhcCC-HHHHHHHhhhhhHHHH
Confidence 344444443344444455554 5567888999999999999999999999820 2468888899999987
No 112
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.70 E-value=8.4e-06 Score=48.69 Aligned_cols=30 Identities=23% Similarity=0.408 Sum_probs=26.4
Q ss_pred cccccCCCchHHHHHHHhCcHHHHHHHHhc
Q 038825 27 YDLVDDTGWNVLHFLTVSLYAYELNCLLKD 56 (75)
Q Consensus 27 ~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~ 56 (75)
++.+|..||||||+|+..|+..++..|++.
T Consensus 634 i~i~D~~G~tpL~wAa~~G~e~l~a~l~~l 663 (975)
T KOG0520|consen 634 IDIRDRNGWTPLHWAAFRGREKLVASLIEL 663 (975)
T ss_pred cccccCCCCcccchHhhcCHHHHHHHHHHh
Confidence 367789999999999999999999988876
No 113
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.64 E-value=6.6e-05 Score=37.63 Aligned_cols=44 Identities=16% Similarity=0.207 Sum_probs=38.7
Q ss_pred cccccCCCchHHHHHHHhCcHHHHHHHHhchhhh-hccccCCCCCCCC
Q 038825 27 YDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFK-NLIDEKDVKGNTP 73 (75)
Q Consensus 27 ~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~-~~~~~~~~~g~tp 73 (75)
++..|..|||+++-|+.-|..+.+.+|+.. | +.+...|..|.+.
T Consensus 5 in~rD~fgWTalmcaa~eg~~eavsyllgr---g~a~vgv~d~sslda 49 (223)
T KOG2384|consen 5 INARDAFGWTALMCAAMEGSNEAVSYLLGR---GVAFVGVTDESSLDA 49 (223)
T ss_pred ccchhhhcchHHHHHhhhcchhHHHHHhcc---CcccccccccccchH
Confidence 378899999999999999999999999999 7 7888888777654
No 114
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.64 E-value=2.2e-05 Score=47.08 Aligned_cols=71 Identities=27% Similarity=0.168 Sum_probs=52.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHhh-CCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISH-YPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
++.+|+++..+....++.+++. +... ...|.++...+|.++. ++.+..-+++... |..++.+|..|.||||
T Consensus 575 ~lllhL~a~~lyawLie~~~e~~~~~~-~eld~d~qgV~hfca~-lg~ewA~ll~~~~--~~ai~i~D~~G~tpL~ 646 (975)
T KOG0520|consen 575 MLLLHLLAELLYAWLIEKVIEWAGSGD-LELDRDGQGVIHFCAA-LGYEWAFLPISAD--GVAIDIRDRNGWTPLH 646 (975)
T ss_pred hHHHHHHHHHhHHHHHHHHhcccccCc-hhhcccCCChhhHhhh-cCCceeEEEEeec--ccccccccCCCCcccc
Confidence 4678999999999888888875 3333 4567777777788544 4444444455444 8899999999999997
No 115
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.28 E-value=0.00021 Score=42.58 Aligned_cols=42 Identities=29% Similarity=0.335 Sum_probs=39.0
Q ss_pred cCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 31 DDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 31 ~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
-..|.+++|.|+..+.....++|+.+ |+++|..|..|.+|+|
T Consensus 653 ~~~~~s~lh~a~~~~~~~~~e~ll~~---ga~vn~~d~~g~~plh 694 (785)
T KOG0521|consen 653 LCIGCSLLHVAVGTGDSGAVELLLQN---GADVNALDSKGRTPLH 694 (785)
T ss_pred hhcccchhhhhhccchHHHHHHHHhc---CCcchhhhccCCCcch
Confidence 34578999999999999999999999 9999999999999997
No 116
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.15 E-value=0.0036 Score=37.62 Aligned_cols=61 Identities=23% Similarity=0.213 Sum_probs=40.9
Q ss_pred HHHHHHHcCCHHHHHHHHhhCCCc---------cccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccC
Q 038825 3 ALLVATSQGHASLVGTIISHYPKC---------YDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEK 66 (75)
Q Consensus 3 ~lh~a~~~~~~~~~~~ll~~~~~~---------~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~ 66 (75)
+|.+|+..|..+.++.++...... ....-..+.||+..||+.++.+|+++|+.. |+.+...
T Consensus 91 ALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~k---g~~i~~P 160 (822)
T KOG3609|consen 91 ALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTR---GHCIPIP 160 (822)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHc---CCCCCCC
Confidence 355566666666666665433221 012234467999999999999999999998 7665543
No 117
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.38 E-value=0.0097 Score=33.24 Aligned_cols=36 Identities=19% Similarity=0.245 Sum_probs=28.7
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHH
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVL 38 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l 38 (75)
+||.+|+..||.++++.|+..|+-+ ..-...|..++
T Consensus 71 spL~lAsLcGHe~vvklLLenGAiC-~rdtf~G~RC~ 106 (516)
T KOG0511|consen 71 SPLYLASLCGHEDVVKLLLENGAIC-SRDTFDGDRCH 106 (516)
T ss_pred cHHHHHHHcCcHHHHHHHHHcCCcc-cccccCcchhh
Confidence 6899999999999999999999865 44445555543
No 118
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=96.21 E-value=0.03 Score=23.99 Aligned_cols=47 Identities=15% Similarity=0.152 Sum_probs=38.7
Q ss_pred HHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhch
Q 038825 3 ALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDL 57 (75)
Q Consensus 3 ~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~ 57 (75)
.+..|+..|+.++++.+++.+. + + ...+..|....+.+++++|++..
T Consensus 9 tl~~Ai~GGN~eII~~c~~~~~-~----~---~~~l~~AI~~H~n~i~~~l~~~y 55 (76)
T PF11929_consen 9 TLEYAIIGGNFEIINICLKKNK-P----D---NDCLEYAIKSHNNEIADWLIENY 55 (76)
T ss_pred HHHHHHhCCCHHHHHHHHHHhc-c----H---HHHHHHHHHHhhHHHHHHHHHhc
Confidence 5788999999999999986552 2 1 46799999999999999998863
No 119
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=94.77 E-value=0.047 Score=33.24 Aligned_cols=26 Identities=12% Similarity=0.212 Sum_probs=23.8
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCc
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKC 26 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~ 26 (75)
.||+.+||..+++|+++.|+.++..+
T Consensus 132 itPliLAAh~NnyEil~~Ll~kg~~i 157 (822)
T KOG3609|consen 132 ITPLMLAAHLNNFEILQCLLTRGHCI 157 (822)
T ss_pred ccHHHHHHHhcchHHHHHHHHcCCCC
Confidence 38999999999999999999998864
No 120
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=94.69 E-value=0.26 Score=26.10 Aligned_cols=51 Identities=12% Similarity=-0.073 Sum_probs=40.5
Q ss_pred CCHHHHHHHHhhCCCcc---ccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccc
Q 038825 11 GHASLVGTIISHYPKCY---DLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLID 64 (75)
Q Consensus 11 ~~~~~~~~ll~~~~~~~---~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~ 64 (75)
.+..++++++.+|-... ..+..+|.|-|.-|...+..+++.+|++. |+..+
T Consensus 228 a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~---GA~~~ 281 (284)
T PF06128_consen 228 ASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKY---GAISG 281 (284)
T ss_pred CcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHc---Ccccc
Confidence 35678888888776432 34567899999999999999999999999 77543
No 121
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=94.21 E-value=0.36 Score=24.61 Aligned_cols=45 Identities=18% Similarity=0.059 Sum_probs=34.9
Q ss_pred HHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHh
Q 038825 4 LLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLK 55 (75)
Q Consensus 4 lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~ 55 (75)
|..|+..|-.+++...++.|.+. + .+.|..|+..++..++.+++.
T Consensus 147 l~~a~~kgll~F~letlkygg~~-~------~~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYGGNV-D------IIVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcCCcc-c------HHHHHHHHHhhHHHHHHHhhc
Confidence 56788888888888888888754 2 178888888888888887764
No 122
>KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=90.52 E-value=0.024 Score=32.73 Aligned_cols=69 Identities=16% Similarity=-0.061 Sum_probs=38.3
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCch-HHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWN-VLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNT 72 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~-~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~t 72 (75)
||++++|+..|.++++.+++..+-+..+..-.+|.. ....-...+..+.+..|... ++..+..|..|+.
T Consensus 59 R~~~~v~~~~Gs~~~~~~i~~~~~~e~~~~C~~~~~~C~~~g~s~~~~e~~~hL~~~---k~~~~~tda~g~~ 128 (528)
T KOG1595|consen 59 RRRRPVARRDGSFNYSPDIYCTKYDEVTGICPDGDEHCAVLGRSVGDTERTYHLRYY---KTLPCVTDARGNC 128 (528)
T ss_pred ccccchhhhcCccccccceeecchhhccccCCCCcccchhcccccCCcceeEecccc---ccccCccccCCCc
Confidence 578888888888888888776555443444444444 22222223344444444444 5555555555543
No 123
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=84.43 E-value=0.19 Score=29.84 Aligned_cols=45 Identities=27% Similarity=0.201 Sum_probs=33.6
Q ss_pred CCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhc
Q 038825 11 GHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKD 56 (75)
Q Consensus 11 ~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~ 56 (75)
+....+-.+++.+... ...|..+.+|+|+++..|.+.+.+.+...
T Consensus 407 ~~ss~v~~lik~~~~~-~~~d~f~~~p~~~~~~sgdp~~~~~~~~~ 451 (605)
T KOG3836|consen 407 NSSSLVFTLIKKGAHP-NDDDKFGFTPLHIPQISGDPRIIQLLLNC 451 (605)
T ss_pred CCccceeeeecccCcc-chhcccccccccccCCCCCHHHhhhhhhh
Confidence 3333334445555555 67788999999999999999999888765
No 124
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=83.99 E-value=1.4 Score=23.00 Aligned_cols=41 Identities=17% Similarity=0.077 Sum_probs=18.8
Q ss_pred cHHHHHHHcCCHHHH-HHHHhhCCC---ccccccCCCchHHHHHH
Q 038825 2 TALLVATSQGHASLV-GTIISHYPK---CYDLVDDTGWNVLHFLT 42 (75)
Q Consensus 2 t~lh~a~~~~~~~~~-~~ll~~~~~---~~~~~~~~~~~~l~~a~ 42 (75)
.|||-++..+..+++ -+++...+. +++..|.+|-.+|.+|.
T Consensus 224 ~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL 268 (280)
T KOG4591|consen 224 NPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIAL 268 (280)
T ss_pred chhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHH
Confidence 355555555554443 233333222 23444555555555554
No 125
>cd03572 ENTH_epsin_related ENTH domain, Epsin Related family; composed of hypothetical proteins containing an ENTH-like domain. The epsin N-terminal homology (ENTH) domain is an evolutionarily conserved protein module found primarily in proteins that participate in clathrin-mediated endocytosis. A set of proteins previously designated as harboring an ENTH domain in fact contains a highly similar, yet unique module referred to as an AP180 N-terminal homology (ANTH) domain. ENTH and ANTH (E/ANTH) domains are structurally similar to the VHS domain and are composed of a superhelix of eight alpha helices. E/ANTH domains bind both inositol phospholipids and proteins and contribute to the nucleation and formation of clathrin coats on membranes. ENTH domains also function in the development of membrane curvature through lipid remodeling during the formation of clathrin-coated vesicles. E/ANTH-bearing proteins have recently been shown to function with adaptor protein-1 and GGA adaptors at the t
Probab=49.06 E-value=31 Score=16.55 Aligned_cols=43 Identities=9% Similarity=0.047 Sum_probs=24.5
Q ss_pred HHHHHHHHhhCCCcccc-ccCCCchHHHHHHHhCcHHHHHHHHhc
Q 038825 13 ASLVGTIISHYPKCYDL-VDDTGWNVLHFLTVSLYAYELNCLLKD 56 (75)
Q Consensus 13 ~~~~~~ll~~~~~~~~~-~~~~~~~~l~~a~~~~~~~~~~~l~~~ 56 (75)
.+++.+|+++-.+. .. +-..--..|.+.+..|+..+...+.++
T Consensus 37 ~ei~d~L~kRL~~~-~~hVK~K~Lrilk~l~~~G~~~f~~~~~~~ 80 (122)
T cd03572 37 QELLEYLLKRLKRS-SPHVKLKVLKIIKHLCEKGNSDFKRELQRN 80 (122)
T ss_pred HHHHHHHHHHhcCC-CCcchHHHHHHHHHHHhhCCHHHHHHHHHh
Confidence 35556666544322 11 112233567778888888887777665
No 126
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=44.29 E-value=36 Score=18.52 Aligned_cols=35 Identities=9% Similarity=-0.024 Sum_probs=23.9
Q ss_pred hhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhc
Q 038825 21 SHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKD 56 (75)
Q Consensus 21 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~ 56 (75)
+.|+. ++..|....|+-.+|...++....+.|++.
T Consensus 3 e~ga~-wn~id~~n~t~gd~a~ern~~rly~~lv~~ 37 (271)
T KOG1709|consen 3 EYGAG-WNFIDYENKTVGDLALERNQSRLYRRLVEA 37 (271)
T ss_pred ccCCC-ccccChhhCCchHHHHHccHHHHHHHHHHc
Confidence 34443 366677777777788777777777777765
No 127
>KOG4335 consensus FERM domain-containing protein KRIT1 [Signal transduction mechanisms]
Probab=39.20 E-value=20 Score=21.75 Aligned_cols=27 Identities=7% Similarity=-0.183 Sum_probs=18.7
Q ss_pred ccccCCCchHHHHHHHhCcHHHHHHHH
Q 038825 28 DLVDDTGWNVLHFLTVSLYAYELNCLL 54 (75)
Q Consensus 28 ~~~~~~~~~~l~~a~~~~~~~~~~~l~ 54 (75)
+.....++++++.+...++.+.+....
T Consensus 171 ~~l~gq~sp~lll~~~s~h~~~v~~d~ 197 (558)
T KOG4335|consen 171 NYLLGQQSPELLLRFTSAHDDDVAMDE 197 (558)
T ss_pred chhhccCCchhhhhccCCchhhhhccc
Confidence 556677888888877777766665443
No 128
>PF10273 WGG: Pre-rRNA-processing protein TSR2; InterPro: IPR019398 The pre-rRNA-processing protein TSR2 is required for 20S pre-rRNA processing []. This family contains a distinctive WGG motif.
Probab=32.16 E-value=39 Score=14.86 Aligned_cols=12 Identities=42% Similarity=0.479 Sum_probs=8.2
Q ss_pred CcHHHHHHHcCC
Q 038825 1 MTALLVATSQGH 12 (75)
Q Consensus 1 ~t~lh~a~~~~~ 12 (75)
||+|.+|+.+++
T Consensus 13 WtaL~lAVen~w 24 (82)
T PF10273_consen 13 WTALQLAVENGW 24 (82)
T ss_pred CHHHHHHHHhcc
Confidence 567777777653
No 129
>PF12645 HTH_16: Helix-turn-helix domain; InterPro: IPR024760 This domain appears to be a helix-turn-helix domain, suggesting a transcriptional regulatory protein. Some proteins with this domain are annotated as conjugative transposon proteins.
Probab=30.18 E-value=54 Score=13.72 Aligned_cols=22 Identities=27% Similarity=0.545 Sum_probs=15.1
Q ss_pred HHHHHHHcCCHHHHHHHHhhCC
Q 038825 3 ALLVATSQGHASLVGTIISHYP 24 (75)
Q Consensus 3 ~lh~a~~~~~~~~~~~ll~~~~ 24 (75)
++-.+|..|+.+.++.++....
T Consensus 2 ~vI~~A~~GD~~A~~~IL~~y~ 23 (65)
T PF12645_consen 2 EVIKAAKQGDPEAMEEILKHYE 23 (65)
T ss_pred HHHHHHHcCCHHHHHHHHHHHH
Confidence 3456778888887777775543
No 130
>PF08035 Op_neuropeptide: Opioids neuropeptide; InterPro: IPR013532 Pro-opiomelanocortin is present in high levels in the pituitary and is processed into 3 major peptide families: adrenocorticotrophin (ACTH); alpha-, beta- and gamma-melanocyte- stimulating hormones (MSH); and beta-endorphin []. ACTH regulates the synthesis and release of glucocorticoids and, to some extent, aldosterone in the adrenal cortex. It is synthesised and released in response to corticotrophin-releasing factor at times of stress (i.e. heat, cold, infection, etc.), its release leading to increased metabolism. The action of MSH in man is poorly understood, but it may be involved in temperature regulation []. Full activity of ACTH resides in the first 20 N-terminal amino acids, the first 13 of which are identical to alpha-MSH [, ]. This region corresponds to the conserved YGG motif that is found in a wide variety of opioid neuropeptides such as enkephalin
Probab=28.90 E-value=31 Score=12.32 Aligned_cols=8 Identities=38% Similarity=0.783 Sum_probs=3.6
Q ss_pred CCCCCCCC
Q 038825 67 DVKGNTPL 74 (75)
Q Consensus 67 ~~~g~tpl 74 (75)
+....+||
T Consensus 9 ~e~s~~PL 16 (31)
T PF08035_consen 9 DERSHKPL 16 (31)
T ss_pred ccccCCch
Confidence 33444554
No 131
>PF04840 Vps16_C: Vps16, C-terminal region; InterPro: IPR006925 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=25.82 E-value=1.4e+02 Score=17.00 Aligned_cols=50 Identities=16% Similarity=0.042 Sum_probs=35.2
Q ss_pred HHHHHcCCHHHHHHHHhhCCCccc-----cccCCCchHHHHHHHhCcHHHHHHHH
Q 038825 5 LVATSQGHASLVGTIISHYPKCYD-----LVDDTGWNVLHFLTVSLYAYELNCLL 54 (75)
Q Consensus 5 h~a~~~~~~~~~~~ll~~~~~~~~-----~~~~~~~~~l~~a~~~~~~~~~~~l~ 54 (75)
..|...|....+..|+...+.... ..-.....+|.-|..+|+.+.+-.++
T Consensus 8 ~~A~~~GR~~LA~~LL~~Ep~~~~qVplLL~m~e~e~AL~kAi~SgD~DLi~~vL 62 (319)
T PF04840_consen 8 RKAYEEGRPKLATKLLELEPRASKQVPLLLKMGEDELALNKAIESGDTDLIYLVL 62 (319)
T ss_pred HHHHHcChHHHHHHHHHcCCChHHHHHHHhcCCchHHHHHHHHHcCCccHHHHHH
Confidence 356778999999999988876511 12345667888888899888665443
No 132
>COG3970 Fumarylacetoacetate (FAA) hydrolase family protein [General function prediction only]
Probab=25.42 E-value=34 Score=19.48 Aligned_cols=15 Identities=27% Similarity=0.503 Sum_probs=11.3
Q ss_pred hhccccCCCCCCCCC
Q 038825 60 KNLIDEKDVKGNTPL 74 (75)
Q Consensus 60 ~~~~~~~~~~g~tpl 74 (75)
|.++|.+|-.|++||
T Consensus 218 gnDVnlRD~EgrsaL 232 (379)
T COG3970 218 GNDVNLRDFEGRSAL 232 (379)
T ss_pred cCcccccccccccch
Confidence 467888888888776
No 133
>TIGR00847 ccoS cytochrome oxidase maturation protein, cbb3-type. CcoS from Rhodobacter capsulatus has been shown essential for incorporation of redox-active prosthetic groups (heme, Cu) into cytochrome cbb(3) oxidase. FixS of Bradyrhizobium japonicum appears to have the same function. Members of this family are found so far in organisms with a cbb3-type cytochrome oxidase, including Neisseria meningitidis, Helicobacter pylori, Campylobacter jejuni, Caulobacter crescentus, Bradyrhizobium japonicum, and Rhodobacter capsulatus.
Probab=21.08 E-value=48 Score=13.31 Aligned_cols=8 Identities=25% Similarity=0.389 Sum_probs=3.8
Q ss_pred HHHHHcCC
Q 038825 5 LVATSQGH 12 (75)
Q Consensus 5 h~a~~~~~ 12 (75)
.+|+++|+
T Consensus 23 ~Wavk~GQ 30 (51)
T TIGR00847 23 LWSLKSGQ 30 (51)
T ss_pred HHHHccCC
Confidence 34455554
Done!