Query 038825
Match_columns 75
No_of_seqs 123 out of 2246
Neff 11.9
Searched_HMMs 29240
Date Mon Mar 25 05:35:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038825.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038825hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.5E-24 5.1E-29 95.5 6.3 71 1-75 3-73 (93)
2 4gpm_A Engineered protein OR26 99.9 3.9E-24 1.3E-28 102.8 6.5 71 1-75 71-141 (169)
3 4b93_B Ankyrin repeat domain-c 99.9 6.9E-23 2.4E-27 104.2 6.8 71 1-75 153-223 (269)
4 3aaa_C Myotrophin, protein V-1 99.9 9.1E-23 3.1E-27 93.5 6.4 71 1-75 41-111 (123)
5 4gpm_A Engineered protein OR26 99.9 4.1E-22 1.4E-26 95.8 6.5 71 1-75 38-108 (169)
6 3c5r_A BARD-1, BRCA1-associate 99.9 9.6E-22 3.3E-26 91.4 7.2 71 1-75 44-114 (137)
7 1dcq_A PYK2-associated protein 99.9 6.5E-22 2.2E-26 101.1 6.3 71 1-75 170-243 (278)
8 2zgd_A 3 repeat synthetic anky 99.9 5.3E-22 1.8E-26 89.6 5.4 71 1-75 25-95 (110)
9 3aaa_C Myotrophin, protein V-1 99.9 1.2E-21 4E-26 89.8 6.2 70 2-75 9-78 (123)
10 3deo_A Signal recognition part 99.9 1.1E-21 3.6E-26 95.0 6.3 71 1-75 77-148 (183)
11 2jab_A H10-2-G3; HER2, darpin, 99.9 1.4E-21 4.9E-26 90.8 6.3 69 2-74 49-117 (136)
12 3twr_A Tankyrase-2; ankyrin re 99.9 3.8E-21 1.3E-25 91.6 7.9 71 1-75 76-146 (165)
13 3c5r_A BARD-1, BRCA1-associate 99.9 1.2E-21 4.2E-26 91.0 5.7 71 1-75 11-81 (137)
14 2l6b_A NR1C; ankyrin, consensu 99.9 1.4E-21 4.8E-26 88.6 5.4 71 1-75 10-80 (115)
15 3ui2_A Signal recognition part 99.8 2.9E-21 9.8E-26 97.0 6.5 71 1-75 78-149 (244)
16 2jab_A H10-2-G3; HER2, darpin, 99.8 2.9E-21 9.9E-26 89.8 6.1 71 1-75 15-85 (136)
17 3twr_A Tankyrase-2; ankyrin re 99.8 4.2E-21 1.4E-25 91.4 6.6 71 1-75 43-113 (165)
18 4hbd_A KN motif and ankyrin re 99.8 3.4E-21 1.2E-25 98.2 6.6 72 1-75 184-255 (276)
19 1awc_B Protein (GA binding pro 99.8 3.6E-21 1.2E-25 90.8 6.2 69 2-74 69-137 (153)
20 3f6q_A Integrin-linked protein 99.8 1.1E-20 3.6E-25 91.1 7.7 70 2-75 74-143 (179)
21 1awc_B Protein (GA binding pro 99.8 4.4E-21 1.5E-25 90.5 6.2 71 1-75 35-105 (153)
22 3t8k_A Uncharacterized protein 99.8 4E-21 1.4E-25 93.5 6.1 71 1-75 39-120 (186)
23 3jxi_A Vanilloid receptor-rela 99.8 3.9E-21 1.3E-25 96.8 6.2 71 1-75 94-181 (260)
24 3f6q_A Integrin-linked protein 99.8 6.1E-21 2.1E-25 91.9 6.5 71 1-75 40-110 (179)
25 1s70_B 130 kDa myosin-binding 99.8 1.5E-20 5E-25 96.0 8.2 71 1-75 200-270 (299)
26 2vge_A RELA-associated inhibit 99.8 1.4E-20 4.9E-25 93.9 7.9 71 1-75 55-126 (229)
27 3v30_A DNA-binding protein rfx 99.8 8.9E-21 3.1E-25 90.8 6.5 69 2-74 38-106 (172)
28 2etb_A Transient receptor pote 99.8 7.8E-21 2.7E-25 95.6 6.5 71 1-75 91-177 (256)
29 1oy3_D Transcription factor in 99.8 1.2E-20 4.1E-25 95.5 7.1 71 1-75 193-263 (282)
30 1d9s_A Cyclin-dependent kinase 99.8 1E-21 3.4E-26 91.3 2.9 69 2-75 47-116 (136)
31 1k1a_A B-cell lymphoma 3-encod 99.8 3.9E-20 1.3E-24 92.1 8.7 71 1-75 151-221 (241)
32 3ehr_A Osteoclast-stimulating 99.8 7.8E-21 2.7E-25 94.1 5.7 71 1-75 107-178 (222)
33 2pnn_A Transient receptor pote 99.8 1.2E-20 4.1E-25 95.6 6.5 71 1-75 102-189 (273)
34 3v30_A DNA-binding protein rfx 99.8 1.5E-20 5.1E-25 90.0 6.4 71 1-75 70-140 (172)
35 2rfm_A Putative ankyrin repeat 99.8 1.8E-20 6.3E-25 91.0 6.6 70 2-75 70-139 (192)
36 3lvq_E ARF-GAP with SH3 domain 99.8 6.3E-21 2.2E-25 103.3 5.4 71 1-75 172-245 (497)
37 1ycs_B 53BP2, P53BP2; ankyrin 99.8 1.4E-20 4.9E-25 94.1 6.3 69 2-74 72-141 (239)
38 3v31_A Ankyrin repeat family A 99.8 2E-20 6.9E-25 89.2 6.4 69 2-74 38-106 (167)
39 2b0o_E UPLC1; arfgap, structur 99.8 1.2E-20 4E-25 97.3 5.9 71 1-75 191-264 (301)
40 1ikn_D Protein (I-kappa-B-alph 99.8 4.3E-20 1.5E-24 92.0 7.7 71 1-75 118-189 (236)
41 1n0r_A 4ANK, 4 ankyrin repeats 99.8 3.1E-20 1E-24 84.8 6.4 69 2-74 37-105 (126)
42 2y1l_E Darpin-8.4; hydrolase-i 99.8 3E-20 1E-24 88.9 6.5 69 2-74 82-150 (169)
43 1ycs_B 53BP2, P53BP2; ankyrin 99.8 1.1E-20 3.8E-25 94.5 5.2 70 2-75 39-108 (239)
44 3ehr_A Osteoclast-stimulating 99.8 2E-20 6.9E-25 92.6 6.0 72 1-75 74-145 (222)
45 2y1l_E Darpin-8.4; hydrolase-i 99.8 3.4E-20 1.2E-24 88.7 6.5 71 1-75 48-118 (169)
46 1d9s_A Cyclin-dependent kinase 99.8 2.6E-21 8.9E-26 89.9 2.6 70 1-75 13-83 (136)
47 2vge_A RELA-associated inhibit 99.8 2.1E-20 7E-25 93.3 5.9 70 2-75 23-92 (229)
48 3v31_A Ankyrin repeat family A 99.8 3.1E-20 1.1E-24 88.6 6.3 71 1-75 70-140 (167)
49 2xai_A ASB-9, ankyrin repeat a 99.8 2.5E-20 8.7E-25 94.1 6.3 71 1-75 4-74 (261)
50 2rfm_A Putative ankyrin repeat 99.8 2.7E-20 9.3E-25 90.4 6.0 71 1-75 102-172 (192)
51 1ihb_A P18-INK4C(INK6), cyclin 99.8 3.4E-20 1.2E-24 88.0 6.1 71 1-75 71-142 (162)
52 1n0r_A 4ANK, 4 ankyrin repeats 99.8 4.5E-20 1.5E-24 84.3 6.3 71 1-75 3-73 (126)
53 1oy3_D Transcription factor in 99.8 3.7E-20 1.3E-24 93.7 6.5 71 1-75 159-230 (282)
54 2rfa_A Transient receptor pote 99.8 4.4E-20 1.5E-24 91.6 6.6 71 1-75 76-159 (232)
55 3deo_A Signal recognition part 99.8 2E-20 6.8E-25 90.5 5.0 70 1-75 45-115 (183)
56 3jue_A Arfgap with coiled-coil 99.8 4.4E-20 1.5E-24 97.4 6.6 71 1-75 236-306 (368)
57 2dzn_A Probable 26S proteasome 99.8 7.7E-20 2.6E-24 90.5 7.1 71 1-75 141-213 (228)
58 1yyh_A HN1;, notch 1, ankyrin 99.8 5.2E-20 1.8E-24 92.6 6.5 71 1-75 158-228 (253)
59 1bd8_A P19INK4D CDK4/6 inhibit 99.8 3.5E-20 1.2E-24 87.5 5.3 68 2-74 38-105 (156)
60 1ihb_A P18-INK4C(INK6), cyclin 99.8 3E-20 1E-24 88.1 4.6 70 1-75 39-108 (162)
61 1s70_B 130 kDa myosin-binding 99.8 9.8E-20 3.4E-24 93.0 6.6 71 1-75 74-144 (299)
62 3d9h_A CDNA FLJ77766, highly s 99.8 9.1E-20 3.1E-24 93.2 6.5 71 1-75 60-130 (285)
63 1bd8_A P19INK4D CDK4/6 inhibit 99.8 1.3E-19 4.5E-24 85.5 6.5 70 1-75 69-138 (156)
64 3utm_A Tankyrase-1; tankyrase, 99.8 1E-19 3.4E-24 94.2 6.6 71 1-75 248-318 (351)
65 2etb_A Transient receptor pote 99.8 8.5E-20 2.9E-24 91.8 6.0 71 1-75 137-226 (256)
66 1bi7_B P16INK4A, MTS1, multipl 99.8 1.3E-19 4.4E-24 85.8 6.2 68 3-74 81-148 (156)
67 2xai_A ASB-9, ankyrin repeat a 99.8 2.4E-19 8.1E-24 90.6 7.4 70 1-75 135-204 (261)
68 3utm_A Tankyrase-1; tankyrase, 99.8 1.3E-19 4.4E-24 93.8 6.6 71 1-75 59-129 (351)
69 3ui2_A Signal recognition part 99.8 3.9E-20 1.3E-24 92.9 4.4 70 1-75 46-116 (244)
70 1bi7_B P16INK4A, MTS1, multipl 99.8 1.3E-20 4.3E-25 89.3 2.5 69 2-75 47-116 (156)
71 3b7b_A Euchromatic histone-lys 99.8 1.3E-19 4.3E-24 90.2 6.2 71 1-75 145-215 (237)
72 2dzn_A Probable 26S proteasome 99.8 1.7E-19 5.6E-24 89.3 6.5 71 1-75 108-179 (228)
73 3aji_A 26S proteasome non-ATPa 99.8 1.5E-19 5E-24 89.6 6.3 71 1-75 140-210 (231)
74 3jxi_A Vanilloid receptor-rela 99.8 1.3E-19 4.4E-24 91.2 6.2 71 1-75 141-230 (260)
75 3ljn_A Hypothetical protein; a 99.8 8.5E-20 2.9E-24 95.5 5.1 70 2-75 140-216 (364)
76 2f8y_A Notch homolog 1, transl 99.8 2.7E-19 9.4E-24 88.3 6.7 69 2-74 127-195 (223)
77 1yyh_A HN1;, notch 1, ankyrin 99.8 1.1E-19 3.8E-24 91.4 5.1 71 1-75 125-195 (253)
78 1n11_A Ankyrin; clathrin, BAND 99.8 1.6E-19 5.4E-24 96.1 5.9 71 1-75 312-382 (437)
79 3hra_A Ankyrin repeat family p 99.8 4E-19 1.4E-23 86.6 6.7 71 2-75 41-111 (201)
80 3aji_A 26S proteasome non-ATPa 99.8 3E-19 1E-23 88.5 6.3 71 1-75 41-111 (231)
81 2f8y_A Notch homolog 1, transl 99.8 3.7E-19 1.3E-23 87.8 6.5 71 1-75 93-163 (223)
82 3kea_A K1L; tropism, ANK repea 99.8 1E-19 3.5E-24 93.0 4.6 71 1-75 63-134 (285)
83 4b93_B Ankyrin repeat domain-c 99.8 1.5E-19 5.2E-24 92.0 5.0 69 3-75 122-190 (269)
84 2l6b_A NR1C; ankyrin, consensu 99.8 8.4E-20 2.9E-24 82.7 3.7 70 1-74 43-112 (115)
85 1sw6_A Regulatory protein SWI6 99.8 3.7E-19 1.3E-23 92.4 6.3 71 1-75 202-321 (327)
86 3d9h_A CDNA FLJ77766, highly s 99.8 7.9E-19 2.7E-23 89.7 7.4 70 1-75 191-260 (285)
87 2fo1_E LIN-12 protein; beta-ba 99.8 2.8E-19 9.6E-24 94.1 5.7 71 1-75 280-351 (373)
88 2pnn_A Transient receptor pote 99.8 3.7E-19 1.3E-23 90.2 5.9 71 1-75 149-238 (273)
89 3ljn_A Hypothetical protein; a 99.8 1E-18 3.5E-23 91.4 7.6 71 1-75 174-249 (364)
90 3hra_A Ankyrin repeat family p 99.8 4.4E-19 1.5E-23 86.4 5.8 70 2-75 108-183 (201)
91 2rfa_A Transient receptor pote 99.8 4.2E-19 1.4E-23 88.1 5.8 71 1-75 122-202 (232)
92 3b7b_A Euchromatic histone-lys 99.8 7.8E-19 2.7E-23 87.3 6.6 71 1-75 112-182 (237)
93 1n11_A Ankyrin; clathrin, BAND 99.8 5.1E-19 1.8E-23 94.2 6.2 71 1-75 15-85 (437)
94 1sw6_A Regulatory protein SWI6 99.8 2.6E-19 8.9E-24 93.0 4.5 72 1-75 132-206 (327)
95 1wdy_A 2-5A-dependent ribonucl 99.8 9.7E-19 3.3E-23 88.4 6.3 71 1-75 40-110 (285)
96 1k1a_A B-cell lymphoma 3-encod 99.8 9.9E-19 3.4E-23 87.0 6.0 71 1-75 117-188 (241)
97 4hbd_A KN motif and ankyrin re 99.8 1.4E-18 4.9E-23 88.5 6.5 72 1-75 112-221 (276)
98 3t8k_A Uncharacterized protein 99.8 7.5E-20 2.6E-24 89.0 1.5 71 1-75 76-159 (186)
99 3kea_A K1L; tropism, ANK repea 99.8 4.7E-19 1.6E-23 90.6 4.4 69 1-75 32-100 (285)
100 1ikn_D Protein (I-kappa-B-alph 99.8 2.7E-18 9.3E-23 85.5 6.3 72 1-75 79-156 (236)
101 4g8k_A 2-5A-dependent ribonucl 99.8 2.4E-18 8.1E-23 89.3 6.2 69 2-74 27-96 (337)
102 1n0q_A 3ANK, 3 ankyrin repeats 99.7 1.7E-17 5.7E-22 72.8 7.1 55 1-56 36-90 (93)
103 2fo1_E LIN-12 protein; beta-ba 99.7 5.9E-18 2E-22 89.1 6.0 74 1-75 167-240 (373)
104 2b0o_E UPLC1; arfgap, structur 99.7 2.2E-17 7.6E-22 85.2 7.8 65 1-75 227-291 (301)
105 3eu9_A Huntingtin-interacting 99.7 1.3E-17 4.3E-22 82.8 6.1 70 2-74 44-113 (240)
106 1wdy_A 2-5A-dependent ribonucl 99.7 1.6E-17 5.6E-22 83.9 6.2 71 1-75 6-77 (285)
107 3eu9_A Huntingtin-interacting 99.7 2.5E-17 8.4E-22 81.7 6.6 71 1-75 77-147 (240)
108 3jue_A Arfgap with coiled-coil 99.7 1.3E-17 4.5E-22 88.1 5.3 70 2-75 201-273 (368)
109 3lvq_E ARF-GAP with SH3 domain 99.7 1.6E-16 5.3E-21 86.4 5.8 69 3-75 135-212 (497)
110 1dcq_A PYK2-associated protein 99.7 1.2E-15 4E-20 78.1 7.8 58 1-62 206-263 (278)
111 4g8k_A 2-5A-dependent ribonucl 99.6 1.5E-15 5.2E-20 78.8 7.3 62 1-66 240-302 (337)
112 2aja_A Ankyrin repeat family p 99.6 2.1E-17 7.3E-22 87.5 -0.6 70 2-75 130-203 (376)
113 2zgd_A 3 repeat synthetic anky 99.6 8.9E-15 3E-19 65.8 6.9 52 1-53 58-109 (110)
114 2aja_A Ankyrin repeat family p 99.5 5E-16 1.7E-20 82.3 -0.9 55 1-56 164-221 (376)
115 1gp8_A Protein (scaffolding pr 70.1 3.6 0.00012 14.9 2.3 16 5-20 18-33 (40)
116 3zrh_A Ubiquitin thioesterase 37.1 61 0.0021 18.7 6.0 49 8-56 30-91 (454)
117 2plx_B Peptide inhibitor; heli 35.5 16 0.00054 11.5 1.2 18 5-22 6-23 (26)
118 2cmy_B Beta trypsin, veronica 26.9 28 0.00095 11.6 0.8 19 5-23 11-29 (34)
119 3mko_A Glycoprotein C; trimeri 23.3 17 0.00059 16.8 0.0 10 65-74 124-133 (137)
No 1
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.91 E-value=1.5e-24 Score=95.48 Aligned_cols=71 Identities=27% Similarity=0.354 Sum_probs=68.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|++.+.++ +..+..|+||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~d~~g~t~l~ 73 (93)
T 1n0q_A 3 RTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEA---GADVNAKDKNGRTPLH 73 (93)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCccCCCCCCHHH
Confidence 58999999999999999999999987 88899999999999999999999999999 9999999999999986
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.91 E-value=3.9e-24 Score=102.84 Aligned_cols=71 Identities=25% Similarity=0.310 Sum_probs=64.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|++.++++ +..|..|+||||+|+..|+.+++++|++. |++++.+|.+|.||||
T Consensus 71 ~TpLh~A~~~g~~~~v~~Ll~~gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~---gad~~~~d~~G~TpL~ 141 (169)
T 4gpm_A 71 RTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGHKEVVKLLISK---GADVNTSDSDGRTPLD 141 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCcCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCccccCCCCCCHHH
Confidence 58999999999999999999999887 88899999999999999999999999998 9999999999999985
No 3
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.89 E-value=6.9e-23 Score=104.18 Aligned_cols=71 Identities=21% Similarity=0.292 Sum_probs=68.2
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|++.++++ +..+..|+||||+|+..|+.+++++|++. |++++.+|.+|.||||
T Consensus 153 ~TpL~~A~~~g~~~~v~~Ll~~gadv-n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~---Gad~~~~d~~G~TpL~ 223 (269)
T 4b93_B 153 NTPLIYACSGGHHELVALLLQHGASI-NASNNKGNTALHEAVIEKHVFVVELLLLH---GASVQVLNKRQRTAVD 223 (269)
T ss_dssp CCHHHHHHHTTCGGGHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHT---TCCSCCCCTTSCCSGG
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCC-CccccCCCcHHHHHHHcCCHHHHHHHHHC---CCCCCCcCCCCCCHHH
Confidence 58999999999999999999999987 88899999999999999999999999999 9999999999999996
No 4
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=9.1e-23 Score=93.47 Aligned_cols=71 Identities=14% Similarity=0.028 Sum_probs=54.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..++.+++++|++.+.++ +..|..|+||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 41 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~t~l~ 111 (123)
T 3aaa_C 41 RKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLSAVYEGHVSCVKLLLSK---GADKTVKGPDGLTAFE 111 (123)
T ss_dssp SCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTSCCHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCCcCCCCCCHHH
Confidence 46777777777777777777777765 66777777777777777777777777777 7777777777777764
No 5
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.87 E-value=4.1e-22 Score=95.82 Aligned_cols=71 Identities=28% Similarity=0.351 Sum_probs=63.2
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..++.++++.++..+.++ +..+..|+||||+|+..|+.+++++|++. |++++.+|.+|.||||
T Consensus 38 ~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~---gadvn~~d~~G~TpLh 108 (169)
T 4gpm_A 38 RTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGHKEVVKLLISK---GADVNAKDSDGRTPLH 108 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcCCHHHHHHHHHC---cCCCCCCCCCCCCHHH
Confidence 47888888888888888888888887 77888999999999999999999999998 9999999999999986
No 6
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.87 E-value=9.6e-22 Score=91.39 Aligned_cols=71 Identities=18% Similarity=0.140 Sum_probs=53.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..++.+++++|+..+.++ +..+..|.||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 44 ~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~tpl~ 114 (137)
T 3c5r_A 44 WTPLHEACNHGHLKVVELLLQHKALV-NTTGYQNDSPLHDAAKNGHVDIVKLLLSY---GASRNAVNIFGLRPVD 114 (137)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCGGGCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCGGG
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcc-cCcCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCCCCCCCCCHHH
Confidence 46777777777777777777777765 66677777777777777777777777777 7777777777777764
No 7
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.86 E-value=6.5e-22 Score=101.06 Aligned_cols=71 Identities=27% Similarity=0.318 Sum_probs=67.9
Q ss_pred CcHHHHHHHc---CCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQ---GHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+.. ++.+++++|+..++++ +..|..|+||||+|+..|+.+++++|++. |++++.+|..|.||||
T Consensus 170 ~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~---gad~~~~d~~g~tpL~ 243 (278)
T 1dcq_A 170 ETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGSTALHYCCLTDNAECLKLLLRG---KASIEIANESGETPLD 243 (278)
T ss_dssp CBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHH
T ss_pred CCcchHHHHhcccchHHHHHHHHHCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCCccCCCCCHHH
Confidence 5899999999 8999999999999997 88899999999999999999999999998 9999999999999986
No 8
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.86 E-value=5.3e-22 Score=89.64 Aligned_cols=71 Identities=20% Similarity=0.193 Sum_probs=67.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+|+||+|+..|+.+++++|+..+.++ +..|..|+||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 25 ~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~---ga~~~~~d~~g~tpl~ 95 (110)
T 2zgd_A 25 GKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLEA---GADVXAQDKFGKTAFD 95 (110)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHH
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCccccccCCCcHHH
Confidence 37999999999999999999999887 78899999999999999999999999999 9999999999999985
No 9
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.86 E-value=1.2e-21 Score=89.75 Aligned_cols=70 Identities=20% Similarity=0.159 Sum_probs=67.0
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
||||+|+..|+.+++++|+..+.++ +..+..|+||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 9 ~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~d~~g~tpL~ 78 (123)
T 3aaa_C 9 KEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLK---GADINAPDKHHITPLL 78 (123)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHTT---TCCTTCCCTTSCCHHH
T ss_pred hHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHHc---CCCCCcCCCCCCCHHH
Confidence 7999999999999999999999887 88899999999999999999999999999 9999999999999986
No 10
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.86 E-value=1.1e-21 Score=95.01 Aligned_cols=71 Identities=24% Similarity=0.230 Sum_probs=62.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCcccccc-CCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVD-DTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|+..++++ +..+ ..|+||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 77 ~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~---ga~~~~~d~~g~tpl~ 148 (183)
T 3deo_A 77 RTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMAAGYVRPEVVEALVEL---GADIEVEDERGLTALE 148 (183)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSSCCHHHHHHHTTCHHHHHHHHHH---TCCTTCCCTTSCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHHhcCcHHHHHHHHHc---CCCCcCCCCCCCCHHH
Confidence 58999999999999999999988887 6566 7899999999999999999999988 8999999999999875
No 11
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.86 E-value=1.4e-21 Score=90.80 Aligned_cols=69 Identities=26% Similarity=0.362 Sum_probs=37.5
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
||||+|+..++.+++++|++.+.++ +..+..|.||||+|+..++.+++++|++. |++++.+|..|.|||
T Consensus 49 t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~tpl 117 (136)
T 2jab_A 49 TPLYLATAHGHLEIVEVLLKNGADV-NAVDAIGFTPLHLAAFIGHLEIAEVLLKH---GADVNAQDKFGKTAF 117 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTSCCHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCcCcCCCCCCHH
Confidence 4555555555555555555555544 44455555555555555555555555555 555555555555554
No 12
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.86 E-value=3.8e-21 Score=91.56 Aligned_cols=71 Identities=24% Similarity=0.219 Sum_probs=48.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..++.+++++|+..+.++ +..+..|+||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 76 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~t~l~ 146 (165)
T 3twr_A 76 LVPLHNACSYGHYEVAELLVKHGAVV-NVADLWKFTPLHEAAAKGKYEICKLLLQH---GADPTKKNRDGNTPLD 146 (165)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCTGG
T ss_pred CCHHHHHHHcCcHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCcccCCCCCChhH
Confidence 36677777777777777777666665 55666677777777777777777777766 6777777777777764
No 13
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.86 E-value=1.2e-21 Score=91.05 Aligned_cols=71 Identities=24% Similarity=0.364 Sum_probs=67.7
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|++.+.++ +..+..|+||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 11 ~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~~~~~g~t~L~ 81 (137)
T 3c5r_A 11 ETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVELLLQH---KALVNTTGYQNDSPLH 81 (137)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCGGGCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCcccCcCCCCCCHHH
Confidence 58999999999999999999999887 78899999999999999999999999999 9999999999999986
No 14
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.85 E-value=1.4e-21 Score=88.58 Aligned_cols=71 Identities=27% Similarity=0.292 Sum_probs=64.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|+..+.++ +..+..|+||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 10 ~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~~d~~g~tpl~ 80 (115)
T 2l6b_A 10 NTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLAK---GADVNARSKDGNTPEH 80 (115)
T ss_dssp CCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTTT---TCCTTCCCTTCCCTTH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHc---CCCCcccCCCCCCHHH
Confidence 58999999999999999999998886 77888999999999999999999999998 9999999999999985
No 15
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.85 E-value=2.9e-21 Score=97.03 Aligned_cols=71 Identities=24% Similarity=0.230 Sum_probs=63.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCcccccc-CCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVD-DTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|+..++++ +..+ ..|+||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 78 ~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~---ga~~~~~d~~g~t~l~ 149 (244)
T 3ui2_A 78 RTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMAAGYVRPEVVEALVEL---GADIEVEDERGLTALE 149 (244)
T ss_dssp CBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTCCCHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCCCCCCCCCCcHHH
Confidence 58999999999999999999999887 6666 7799999999999999999999998 9999999999999875
No 16
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.85 E-value=2.9e-21 Score=89.78 Aligned_cols=71 Identities=25% Similarity=0.274 Sum_probs=67.3
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|++.+.++ +..+..|+||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 15 ~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~d~~g~t~L~ 85 (136)
T 2jab_A 15 GKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLKN---GADVNAVDAIGFTPLH 85 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTCCCHHH
T ss_pred cHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCcCCCCCCCHHH
Confidence 37999999999999999999999887 88899999999999999999999999999 9999999999999986
No 17
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.85 E-value=4.2e-21 Score=91.42 Aligned_cols=71 Identities=24% Similarity=0.199 Sum_probs=67.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|++.+.++ +..+..|+||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 43 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~L~ 113 (165)
T 3twr_A 43 STPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHNACSYGHYEVAELLVKH---GAVVNVADLWKFTPLH 113 (165)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTCCCHHH
T ss_pred CCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHHHHHHcCcHHHHHHHHhC---CCCCCCcCCCCCCHHH
Confidence 48999999999999999999999887 88899999999999999999999999999 9999999999999986
No 18
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.85 E-value=3.4e-21 Score=98.15 Aligned_cols=72 Identities=25% Similarity=0.225 Sum_probs=67.7
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|+..++++ +..|..|+||||+|+..|+.+++++|++.. |++++.+|..|.||||
T Consensus 184 ~tpLh~A~~~g~~~~v~~Ll~~gad~-n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~--gad~~~~d~~g~TpL~ 255 (276)
T 4hbd_A 184 QTALMLAVSHGRVDVVKALLACEADV-NVQDDDGSTALMCACEHGHKEIAGLLLAVP--SCDISLTDRDGSTALM 255 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHTST--TCCTTCCCTTSCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHhcC--CCCCcCcCCCCCCHHH
Confidence 58999999999999999999999997 888999999999999999999999999933 9999999999999985
No 19
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.85 E-value=3.6e-21 Score=90.84 Aligned_cols=69 Identities=23% Similarity=0.249 Sum_probs=37.6
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..++.+++++|++. |++++.+|..|.|||
T Consensus 69 t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~t~l 137 (153)
T 1awc_B 69 TPLHMAASEGHANIVEVLLKHGADV-NAKDMLKMTALHWATEHNHQEVVELLIKY---GADVHTQSKFCKTAF 137 (153)
T ss_dssp CHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHH
T ss_pred CHHHHHHHcChHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCccccCCCCCCHH
Confidence 4555555555555555555555544 44455555555555555555555555555 555555555555554
No 20
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.85 E-value=1.1e-20 Score=91.11 Aligned_cols=70 Identities=21% Similarity=0.288 Sum_probs=43.8
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 74 t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~tpl~ 143 (179)
T 3f6q_A 74 TPLHLAASHGHRDIVQKLLQYKADI-NAVNEHGNVPLHYACFWGQDQVAEDLVAN---GALVSICNKYGEMPVD 143 (179)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCSSBCCTTSCCGGG
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCcchhccCCCCcHH
Confidence 5666666666666666666666554 55566666666666666666666666666 6666666666666653
No 21
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.85 E-value=4.4e-21 Score=90.53 Aligned_cols=71 Identities=24% Similarity=0.217 Sum_probs=64.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|++.+.++ +..+..|+||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 35 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~L~ 105 (153)
T 1awc_B 35 TSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASEGHANIVEVLLKH---GADVNAKDMLKMTALH 105 (153)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHTT---TCCTTCCCTTSCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcChHHHHHHHHHc---CCCCCCCCCCCCCHHH
Confidence 48999999999999999999988886 77888899999999999999999999998 9999999999999985
No 22
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.85 E-value=4e-21 Score=93.55 Aligned_cols=71 Identities=8% Similarity=-0.078 Sum_probs=65.0
Q ss_pred CcHHHHHHHcCCH----HHHHHHHhhCCCccccccCCCchHHHHHHHhCc------HHHHHHHHhchhhhhccccCCCCC
Q 038825 1 MTALLVATSQGHA----SLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLY------AYELNCLLKDLLFKNLIDEKDVKG 70 (75)
Q Consensus 1 ~t~lh~a~~~~~~----~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~------~~~~~~l~~~~~~~~~~~~~~~~g 70 (75)
+||||+|+..++. +++++|+..|+++ +..+..|+||||+|+..++ .+++++|++. |++++.+|..|
T Consensus 39 ~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~---Gadin~~d~~g 114 (186)
T 3t8k_A 39 SNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEK---GADITALYKPY 114 (186)
T ss_dssp TTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHT---TCCSSSCBGGG
T ss_pred CCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHC---CCCCCccCCCc
Confidence 5899999999975 5899999999998 8889999999999999886 5789999999 99999999999
Q ss_pred C-CCCC
Q 038825 71 N-TPLH 75 (75)
Q Consensus 71 ~-tplh 75 (75)
. ||||
T Consensus 115 ~ttpLh 120 (186)
T 3t8k_A 115 KIVVFK 120 (186)
T ss_dssp TBCTTG
T ss_pred CchHHH
Confidence 9 9997
No 23
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.84 E-value=3.9e-21 Score=96.76 Aligned_cols=71 Identities=20% Similarity=0.179 Sum_probs=66.4
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCcccccc--------------CCCchHHHHHHHhCcHHHHHHHHh---chhhhhcc
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVD--------------DTGWNVLHFLTVSLYAYELNCLLK---DLLFKNLI 63 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~--------------~~~~~~l~~a~~~~~~~~~~~l~~---~~~~~~~~ 63 (75)
+||||+|+..|+.+++++|++.++++ +..+ ..|+||||+|+..++.+++++|++ . |+++
T Consensus 94 ~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~---ga~~ 169 (260)
T 3jxi_A 94 QTALHIAIERRCKHYVELLVEKGADV-HAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHK---QADL 169 (260)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSC---CCCT
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCc-CccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc---CCCC
Confidence 48999999999999999999999987 6666 589999999999999999999999 7 9999
Q ss_pred ccCCCCCCCCCC
Q 038825 64 DEKDVKGNTPLH 75 (75)
Q Consensus 64 ~~~~~~g~tplh 75 (75)
+.+|..|.||||
T Consensus 170 ~~~d~~g~TpLh 181 (260)
T 3jxi_A 170 RRQDSRGNTVLH 181 (260)
T ss_dssp TCCCTTSCCHHH
T ss_pred cccCCCCCcHHH
Confidence 999999999986
No 24
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.84 E-value=6.1e-21 Score=91.92 Aligned_cols=71 Identities=23% Similarity=0.281 Sum_probs=65.8
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|+..+.++ +..+..|.||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 40 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~d~~g~t~L~ 110 (179)
T 3f6q_A 40 FSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLAASHGHRDIVQKLLQY---KADINAVNEHGNVPLH 110 (179)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHH
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCccCCCCCCHHH
Confidence 48999999999999999999999887 77889999999999999999999999999 9999999999999986
No 25
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.84 E-value=1.5e-20 Score=96.04 Aligned_cols=71 Identities=21% Similarity=0.245 Sum_probs=68.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|+..+.++ +..|..|+||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 200 ~t~L~~A~~~g~~~~v~~Ll~~g~d~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~---gad~~~~d~~g~t~l~ 270 (299)
T 1s70_B 200 GTALHVAAAKGYTEVLKLLIQARYDV-NIKDYDGWTPLHAAAHWGKEEACRILVEN---LCDMEAVNKVGQTAFD 270 (299)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCTTT
T ss_pred CCHHHHHHHCCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHhcCCHHHHHHHHHc---CCCCCCcCCCCCCHHH
Confidence 48999999999999999999999987 88899999999999999999999999999 9999999999999996
No 26
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.84 E-value=1.4e-20 Score=93.88 Aligned_cols=71 Identities=23% Similarity=0.248 Sum_probs=55.9
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCC-CCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKD-VKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~-~~g~tplh 75 (75)
+||||+|+..|+.+++++|++.+.++ +..|..|+||||+|+..++.+++++|++. |++++.++ ..|.||||
T Consensus 55 ~tpLh~A~~~g~~~~v~~Ll~~ga~~-n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~---ga~~~~~~~~~g~tpL~ 126 (229)
T 2vge_A 55 ITALHNAICGANYSIVDFLITAGANV-NSPDSHGWTPLHCAASCNDTVICMALVQH---GAAIFATTLSDGATAFE 126 (229)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTT---TCCTTCCCSSTTCCTGG
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCcccccCCCCCCHHH
Confidence 47888888888888888888877776 66777888888888888888888888877 78887775 57888875
No 27
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.84 E-value=8.9e-21 Score=90.77 Aligned_cols=69 Identities=22% Similarity=0.236 Sum_probs=33.7
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..++.+++++|++. |++++.+|..|.|||
T Consensus 38 t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~L 106 (172)
T 3v30_A 38 TPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLASTGGYTDIVGLLLER---DVDINIYDWNGGTPL 106 (172)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTT---TCCTTCCCTTSCCHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHHCCCHHHHHHHHHc---CCCCCCCCCCCCCHH
Confidence 4455555555555555555444443 44444444555555444444444444444 444444444444444
No 28
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.84 E-value=7.8e-21 Score=95.56 Aligned_cols=71 Identities=21% Similarity=0.189 Sum_probs=66.2
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCC-------------CchHHHHHHHhCcHHHHHHHHh---chhhhhccc
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDT-------------GWNVLHFLTVSLYAYELNCLLK---DLLFKNLID 64 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~-------------~~~~l~~a~~~~~~~~~~~l~~---~~~~~~~~~ 64 (75)
+||||+|+..|+.+++++|++.++++ +..+.. |.||||+|+..++.+++++|++ . |++++
T Consensus 91 ~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~---ga~~n 166 (256)
T 2etb_A 91 HSALHIAIEKRSLQCVKLLVENGADV-HLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ---PASLE 166 (256)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC---CCCTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC-CcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc---CCCcC
Confidence 58999999999999999999999987 666665 9999999999999999999999 7 99999
Q ss_pred cCCCCCCCCCC
Q 038825 65 EKDVKGNTPLH 75 (75)
Q Consensus 65 ~~~~~g~tplh 75 (75)
.+|..|.||||
T Consensus 167 ~~d~~g~TpLh 177 (256)
T 2etb_A 167 ATDSLGNTVLH 177 (256)
T ss_dssp CCCTTSCCHHH
T ss_pred ccCCCCCCHHH
Confidence 99999999986
No 29
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.84 E-value=1.2e-20 Score=95.53 Aligned_cols=71 Identities=14% Similarity=-0.031 Sum_probs=42.9
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|+..+.++ +.++..|.||||+|+..++.+++++|++. |++++.++..|.|||+
T Consensus 193 ~tpL~~A~~~~~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~tpl~ 263 (282)
T 1oy3_D 193 RTPLHLAVEAQAASVLELLLKAGADP-TARMYGGRTPLGSALLRPNPILARLLRAH---GAPEPEDGGDKLSPCS 263 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHTSSCHHHHHHHHHT---TCCCCCCC--------
T ss_pred cCHHHHHHHcCCHHHHHHHHHcCCCC-cccccCCCCHHHHHHHcCCcHHHHHHHHc---CCCcCcCCCccccccc
Confidence 36666666666666666666666665 56666666777777666667777766666 6667766667766663
No 30
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.84 E-value=1e-21 Score=91.33 Aligned_cols=69 Identities=17% Similarity=0.149 Sum_probs=44.6
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCC-CchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDT-GWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
||||+|+. ++.+++++|+..+.++ +..+.. |+||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 47 t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~d~~g~tpl~ 116 (136)
T 1d9s_A 47 RPIQVMMM-GSAQVAELLLLHGAEP-NCADPATLTRPVHDAAREGFLDTLVVLHRA---GARLDVCDAWGRLPVD 116 (136)
T ss_dssp TTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTTTTBCHHHHHHHHTCHHHHHHHHHT---CCCCCCCSSSSSCHHH
T ss_pred CHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCccCCCCCCHHH
Confidence 55666666 6666666666666554 555666 66777777766677777766666 6666666666666654
No 31
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.84 E-value=3.9e-20 Score=92.06 Aligned_cols=71 Identities=18% Similarity=0.174 Sum_probs=66.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 151 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~tpl~ 221 (241)
T 1k1a_A 151 RSPLIHAVENNSLSMVQLLLQHGANV-NAQMYSGSSALHSASGRGLLPLVRTLVRS---GADSSLKNCHNDTPLM 221 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTSCCTTT
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhc---CCCCCCcCCCCCCHHH
Confidence 48999999999999999999999887 78899999999999999999999999998 9999999999999986
No 32
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.83 E-value=7.8e-21 Score=94.06 Aligned_cols=71 Identities=21% Similarity=0.236 Sum_probs=48.7
Q ss_pred CcHHHHHHHcCCHHHHHHHHhh-CCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISH-YPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|+.. +.++ +..+..|+||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 107 ~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~t~l~ 178 (222)
T 3ehr_A 107 STALYWACHGGHKDIVEMLFTQPNIEL-NQQNKLGDTALHAAAWKGYADIVQLLLAK---GARTDLRNIEKKLAFD 178 (222)
T ss_dssp CCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCCTTSCCHHHHHHHHTCHHHHHHHHHH---TCCSCCCCTTSCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHcCCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCccccCCCCCHHH
Confidence 3667777777777777777766 5554 56666777777777777777777777776 6777777777777653
No 33
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.83 E-value=1.2e-20 Score=95.62 Aligned_cols=71 Identities=24% Similarity=0.251 Sum_probs=66.4
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccC--------------CCchHHHHHHHhCcHHHHHHHHh---chhhhhcc
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDD--------------TGWNVLHFLTVSLYAYELNCLLK---DLLFKNLI 63 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~--------------~~~~~l~~a~~~~~~~~~~~l~~---~~~~~~~~ 63 (75)
+||||+|+..|+.+++++|++.++++ +..+. .|.||||+|+..++.+++++|++ . |+++
T Consensus 102 ~tpL~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~---gad~ 177 (273)
T 2pnn_A 102 QTALHIAIERRNMTLVTLLVENGADV-QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQ---PADI 177 (273)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSC---CCCT
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCc-CccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccC---CCCc
Confidence 58999999999999999999999987 66665 79999999999999999999999 7 9999
Q ss_pred ccCCCCCCCCCC
Q 038825 64 DEKDVKGNTPLH 75 (75)
Q Consensus 64 ~~~~~~g~tplh 75 (75)
+.+|..|.||||
T Consensus 178 ~~~d~~g~tpLh 189 (273)
T 2pnn_A 178 SARDSVGNTVLH 189 (273)
T ss_dssp TCCCTTSCCHHH
T ss_pred eeeCCCCCcHHH
Confidence 999999999986
No 34
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.83 E-value=1.5e-20 Score=90.00 Aligned_cols=71 Identities=20% Similarity=0.246 Sum_probs=66.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..++.+++++|+..+.++ +..+..|+||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 70 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~t~l~ 140 (172)
T 3v30_A 70 ESALSLASTGGYTDIVGLLLERDVDI-NIYDWNGGTPLLYAVRGNHVKCVEALLAR---GADLTTEADSGYTPMD 140 (172)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCccccCCCCCCHHH
Confidence 58999999999999999999999887 88899999999999999999999999999 9999999999999985
No 35
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.83 E-value=1.8e-20 Score=91.03 Aligned_cols=70 Identities=21% Similarity=0.301 Sum_probs=37.5
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
||||+|+..++.+++++|+..+.++ +..+..|.||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 70 t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~L~ 139 (192)
T 2rfm_A 70 TALIWAVKNNRLGIAEKLLSKGSNV-NTKDFSGKTPLMWSIIFGYSEMSYFLLEH---GANVNDRNLEGETPLI 139 (192)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHT---TCCSSCCCTTCCCHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHHC---CCCCCCCCCCCCCHHH
Confidence 4555555555555555555555544 44455555555555555555555555555 5555555555555543
No 36
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.83 E-value=6.3e-21 Score=103.35 Aligned_cols=71 Identities=27% Similarity=0.281 Sum_probs=67.4
Q ss_pred CcHHHHHHH---cCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATS---QGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~---~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+. .|+.+++++|+..++++ +..|..|+||||+|+..|+.+++++|++. |++++.+|..|.||||
T Consensus 172 ~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~---ga~~~~~d~~g~tpl~ 245 (497)
T 3lvq_E 172 ELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTALHYAALYNQPDCLKLLLKG---RALVGTVNEAGETALD 245 (497)
T ss_dssp BCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCCSSSCCHHHHHTTTTCHHHHHHHHHT---CCCCSCCCTTCCCHHH
T ss_pred chHHHHHHHhcccccHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcCCHHHHHHHHHc---CCCCCCcCCCCCCHHH
Confidence 489999976 89999999999999997 88999999999999999999999999999 9999999999999986
No 37
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.83 E-value=1.4e-20 Score=94.15 Aligned_cols=69 Identities=20% Similarity=0.239 Sum_probs=41.7
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCC-CCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGN-TPL 74 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~-tpl 74 (75)
||||+|+..|+.+++++|+..+.++ +..|..|+||||+|+..++.+++++|++. |++++.++..|. |||
T Consensus 72 t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~~~~t~l 141 (239)
T 1ycs_B 72 TALHNAVCAGHTEIVKFLVQFGVNV-NAADSDGWTPLHCAASCNNVQVCKFLVES---GAAVFAMTYSDMQTAA 141 (239)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCSSSCCCHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCcceecCCCCcchH
Confidence 5666666666666666666665554 55556666666666666666666666665 666666555544 554
No 38
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.83 E-value=2e-20 Score=89.19 Aligned_cols=69 Identities=23% Similarity=0.279 Sum_probs=29.1
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..++.+++++|++. |++++.+|..|.|||
T Consensus 38 t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~L 106 (167)
T 3v31_A 38 TPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLACSKGYTDIVKMLLDC---GVDVNEYDWNGGTPL 106 (167)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHH---TCCTTCCCTTSCCHH
T ss_pred CHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHHC---CCCCCcCCCCCCCHH
Confidence 3444444444444444444444333 33334444444444444444444444444 444444444444443
No 39
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.83 E-value=1.2e-20 Score=97.34 Aligned_cols=71 Identities=25% Similarity=0.262 Sum_probs=66.6
Q ss_pred CcHHHHHHHc---CCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQ---GHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+.. ++.+++++|+..++++ +..|..|+||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 191 ~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~---gad~~~~d~~G~TpL~ 264 (301)
T 2b0o_E 191 ELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTALHYAALYNQPDCLKLLLKG---RALVGTVNEAGETALD 264 (301)
T ss_dssp ECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHT---TCCCSCCCTTSCCHHH
T ss_pred ccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCCcCCCCCCHHH
Confidence 4899999997 8999999999999987 88899999999999999999999999999 9999999999999985
No 40
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.83 E-value=4.3e-20 Score=91.99 Aligned_cols=71 Identities=20% Similarity=0.229 Sum_probs=63.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccC-CCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDD-TGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~-~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|+..+.++ +..+. .|.||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 118 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~tpl~ 189 (236)
T 1ikn_D 118 HTCLHLASIHGYLGIVELLVSLGADV-NAQEPCNGRTALHLAVDLQNPDLVSLLLKC---GADVNRVTYQGYSPYQ 189 (236)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHTT---TCCSCCCCTTCCCGGG
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCcccCCCCCHHH
Confidence 47999999999999999999999887 66676 899999999999999999999998 9999999999999986
No 41
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.83 E-value=3.1e-20 Score=84.83 Aligned_cols=69 Identities=26% Similarity=0.344 Sum_probs=33.1
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
||||+|+..++.+++++|+..+.++ +..+..|.||||+|+..++.+++++|++. |++++.+|..|.|||
T Consensus 37 t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~---g~~~~~~~~~g~t~l 105 (126)
T 1n0r_A 37 TPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEA---GADVNAKDKNGRTPL 105 (126)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHH
T ss_pred cHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHHHcChHHHHHHHHHc---CCCCcccCCCCCCHH
Confidence 3444444444444444444444443 33444444555555555555555555444 444444444555444
No 42
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.83 E-value=3e-20 Score=88.89 Aligned_cols=69 Identities=23% Similarity=0.276 Sum_probs=31.0
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
||||+|+..|+.+++++|+..+.++ +..+..|.||||+|+..++.+++++|++. |++++.+|..|.|||
T Consensus 82 t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~l 150 (169)
T 2y1l_E 82 TPLRLAALFGHLEIVEVLLKNGADV-NANDMEGHTPLHLAAMFGHLEIVEVLLKN---GADVNAQDKFGKTAF 150 (169)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCCcCCCCCCHH
Confidence 3444444444444444444444443 33444444444444444444444444444 444444444444443
No 43
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.83 E-value=1.1e-20 Score=94.55 Aligned_cols=70 Identities=27% Similarity=0.292 Sum_probs=67.2
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
||||+|+..|+.++++.|+..+.++ +..+..|+||||+|+..|+.+++++|++. |++++.+|..|.||||
T Consensus 39 t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~---ga~~~~~d~~g~tpL~ 108 (239)
T 1ycs_B 39 ALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAVCAGHTEIVKFLVQF---GVNVNAADSDGWTPLH 108 (239)
T ss_dssp HHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHHHHTCHHHHHHHHHH---TCCTTCCCTTCCCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCccCCCCCCHHH
Confidence 7899999999999999999999987 88899999999999999999999999999 9999999999999986
No 44
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.82 E-value=2e-20 Score=92.59 Aligned_cols=72 Identities=17% Similarity=0.182 Sum_probs=67.9
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.++++.|+..+.++ +..+..|+||||+|+..++.+++++|++.. |++++.+|..|.||||
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~--g~~~~~~d~~g~tpL~ 145 (222)
T 3ehr_A 74 DNPLHEAAKRGNLSWLRECLDNRVGV-NGLDKAGSTALYWACHGGHKDIVEMLFTQP--NIELNQQNKLGDTALH 145 (222)
T ss_dssp SCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHTTST--TCCCCCCCTTSCCHHH
T ss_pred ccccccccccCcHHHHHHHHhCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHcCC--CCCccccCCCCCCHHH
Confidence 48999999999999999999999887 888999999999999999999999999876 8999999999999986
No 45
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.82 E-value=3.4e-20 Score=88.70 Aligned_cols=71 Identities=27% Similarity=0.404 Sum_probs=67.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 48 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~~~~~g~t~L~ 118 (169)
T 2y1l_E 48 WTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLRLAALFGHLEIVEVLLKN---GADVNANDMEGHTPLH 118 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCCCCCCCCCHHH
Confidence 58999999999999999999999887 78899999999999999999999999999 9999999999999986
No 46
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.82 E-value=2.6e-21 Score=89.93 Aligned_cols=70 Identities=16% Similarity=0.150 Sum_probs=66.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCC-CCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVK-GNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~-g~tplh 75 (75)
+||||+|+..|+.+++++|++.+.++ +..+..|+||||+|+. ++.+++++|++. |++++.+|.. |.||||
T Consensus 13 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~---g~~~~~~~~~~g~t~L~ 83 (136)
T 1d9s_A 13 DAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQVAELLLLH---GAEPNCADPATLTRPVH 83 (136)
T ss_dssp SCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHHHHHHHHH---TCCSSCCBTTTTBCHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHHHHHHHHC---CCCCCCcCCCCCCCHHH
Confidence 58999999999999999999999887 8889999999999999 999999999999 9999999999 999986
No 47
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.82 E-value=2.1e-20 Score=93.32 Aligned_cols=70 Identities=21% Similarity=0.265 Sum_probs=67.1
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
||||+|+..|+.+++++|+..+.++ +..+..|+||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 23 t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~---ga~~n~~d~~g~tpLh 92 (229)
T 2vge_A 23 VLLLDAALTGELEVVQQAVKEMNDP-SQPNEEGITALHNAICGANYSIVDFLITA---GANVNSPDSHGWTPLH 92 (229)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTCCCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCCCCCCCCCCCHHH
Confidence 6899999999999999999999987 88899999999999999999999999999 9999999999999986
No 48
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.82 E-value=3.1e-20 Score=88.56 Aligned_cols=71 Identities=17% Similarity=0.110 Sum_probs=67.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..++.+++++|+..+.++ +..+..|.||||+|+..++.+++++|++. |++++.++..|.||||
T Consensus 70 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~l~ 140 (167)
T 3v31_A 70 ESALSLACSKGYTDIVKMLLDCGVDV-NEYDWNGGTPLLYAVHGNHVKCVKMLLES---GADPTIETDSGYNSMD 140 (167)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCCcCCCCCCHHH
Confidence 48999999999999999999999987 88899999999999999999999999998 9999999999999975
No 49
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.82 E-value=2.5e-20 Score=94.11 Aligned_cols=71 Identities=18% Similarity=0.162 Sum_probs=65.2
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..|+.+++++|++. |++++.+|..|.||||
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~---g~~~~~~~~~g~t~L~ 74 (261)
T 2xai_A 4 WSPMHEAAIHGHQLSLRNLISQGWAV-NIITADHVSPLHEACLGGHLSCVKILLKH---GAQVNGVTADWHTPLF 74 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTSCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCCCCCCCCCCCHHH
Confidence 58999999999999999999998886 78888999999999999999999999999 9999999999999985
No 50
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.82 E-value=2.7e-20 Score=90.43 Aligned_cols=71 Identities=17% Similarity=0.056 Sum_probs=67.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..++.+++++|+..+.++ +..+..|.||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 102 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~t~l~ 172 (192)
T 2rfm_A 102 KTPLMWSIIFGYSEMSYFLLEHGANV-NDRNLEGETPLIVASKYGRSEIVKKLLEL---GADISARDLTGLTAEA 172 (192)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHT---TCCTTCBCTTSCBHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCCCCcCCCCCCHHH
Confidence 58999999999999999999999987 88899999999999999999999999999 9999999999999975
No 51
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.82 E-value=3.4e-20 Score=87.95 Aligned_cols=71 Identities=17% Similarity=0.242 Sum_probs=56.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhc-cccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNL-IDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~-~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..++.+++++|++. |++ ++.++..|.||||
T Consensus 71 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~~g~t~l~ 142 (162)
T 1ihb_A 71 FAVIHDAARAGFLDTLQTLLEFQADV-NIEDNEGNLPLHLAAKEGHLRVVEFLVKH---TASNVGHRNHKGDTACD 142 (162)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHH---SCCCTTCCCTTSCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHc---cCCCCCCcCCCCCcHHH
Confidence 47888888888888888888887776 67778888888888888888888888887 665 5778888888864
No 52
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.82 E-value=4.5e-20 Score=84.27 Aligned_cols=71 Identities=27% Similarity=0.354 Sum_probs=67.3
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..++.+++++|++. |.+++.++..|.||||
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~~~~~g~t~l~ 73 (126)
T 1n0r_A 3 RTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEA---GADVNAKDKNGRTPLH 73 (126)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTSCCHHH
T ss_pred ccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHHHc---CCCCcccCCCCCcHHH
Confidence 58999999999999999999999887 77899999999999999999999999999 9999999999999986
No 53
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.82 E-value=3.7e-20 Score=93.72 Aligned_cols=71 Identities=25% Similarity=0.198 Sum_probs=66.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccC-CCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDD-TGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~-~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|+..+.++ +..+. .|+||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 159 ~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~---gad~~~~d~~g~tpL~ 230 (282)
T 1oy3_D 159 HTPLHVAVIHKDAEMVRLLRDAGADL-NKPEPTCGRTPLHLAVEAQAASVLELLLKA---GADPTARMYGGRTPLG 230 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHH
T ss_pred cCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCcCHHHHHHHcCCHHHHHHHHHc---CCCCcccccCCCCHHH
Confidence 58999999999999999999999987 66664 599999999999999999999999 9999999999999986
No 54
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.82 E-value=4.4e-20 Score=91.64 Aligned_cols=71 Identities=24% Similarity=0.228 Sum_probs=64.9
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccC-------------CCchHHHHHHHhCcHHHHHHHHhchhhhhccccCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDD-------------TGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKD 67 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~-------------~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~ 67 (75)
+||||+|+..|+.+++++|++.+.++ +..+. .|.||||+|+..++.+++++|++. |++++.+|
T Consensus 76 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~d 151 (232)
T 2rfa_A 76 QTALHIAVINQNVNLVRALLARGASV-SARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEH---GADIRAQD 151 (232)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHT---TCCTTCCC
T ss_pred cCHHHHHHHcCCHHHHHHHHhCCCCC-CcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHC---CCCCCCCC
Confidence 48999999999999999999999886 54443 799999999999999999999999 99999999
Q ss_pred CCCCCCCC
Q 038825 68 VKGNTPLH 75 (75)
Q Consensus 68 ~~g~tplh 75 (75)
..|.||||
T Consensus 152 ~~g~t~L~ 159 (232)
T 2rfa_A 152 SLGNTVLH 159 (232)
T ss_dssp TTSCCHHH
T ss_pred CCCCCHHH
Confidence 99999986
No 55
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.82 E-value=2e-20 Score=90.53 Aligned_cols=70 Identities=21% Similarity=0.243 Sum_probs=65.4
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCC-CCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKD-VKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~-~~g~tplh 75 (75)
+||||+|+..|+.++++.|+. +.++ +..+..|+||||+|+..++.+++++|++. |++++.++ ..|.||||
T Consensus 45 ~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~~g~tpL~ 115 (183)
T 3deo_A 45 ETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEA---GADLDHRDMRGGLTALH 115 (183)
T ss_dssp HHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHT---TCCTTCCCSSSSCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCcCCCCCCCCHHH
Confidence 379999999999999999999 7776 88899999999999999999999999999 99999998 88999986
No 56
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.82 E-value=4.4e-20 Score=97.39 Aligned_cols=71 Identities=21% Similarity=0.223 Sum_probs=66.8
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|+..++++ +..|..|+||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 236 ~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~TpLh~A~~~g~~~~v~~LL~~---Gad~~~~d~~G~TpL~ 306 (368)
T 3jue_A 236 ATPLIQATAANSLLACEFLLQNGANV-NQADSAGRGPLHHATILGHTGLACLFLKR---GADLGARDSEGRDPLT 306 (368)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTSCCHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCcHHHHHHHHHC---cCCCCCcCCCCCCHHH
Confidence 48999999999999999999999987 88899999999999999999999999999 9999999999999985
No 57
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.82 E-value=7.7e-20 Score=90.45 Aligned_cols=71 Identities=21% Similarity=0.157 Sum_probs=53.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhC-CCccccccCCCchHHHHHHHhCcHHHHHHHH-hchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHY-PKCYDLVDDTGWNVLHFLTVSLYAYELNCLL-KDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~-~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|+..+ .++ +..+..|+||||+|+..++.+++++|+ +. |++++.+|..|.||||
T Consensus 141 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~---ga~~~~~~~~g~t~l~ 213 (228)
T 2dzn_A 141 QIPLHRAASVGSLKLIELLCGLGKSAV-NWQDKQGWTPLFHALAEGHGDAAVLLVEKY---GAEYDLVDNKGAKAED 213 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHHH---CCCSCCBCTTSCBGGG
T ss_pred CCHHHHHHHcCCHHHHHHHHhcCcccc-cCcCCCCCCHHHHHHHcCCHHHHHHHHHhc---CCCCCccCCCCCcHHH
Confidence 46777777777777777777777 444 667777788888888888888888777 55 7777777778887764
No 58
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.82 E-value=5.2e-20 Score=92.60 Aligned_cols=71 Identities=14% Similarity=0.037 Sum_probs=57.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 158 ~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~---ga~~~~~d~~g~tpl~ 228 (253)
T 1yyh_A 158 KSALHWAAAVNNVDAAVVLLKNGANK-DMQNNREETPLFLAAREGSYETAKVLLDH---FANRDITDHMDRLPRD 228 (253)
T ss_dssp CBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTCCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHc---CCCccccccCCCCHHH
Confidence 47888888888888888888888776 67778888888888888888888888888 8888888888888764
No 59
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.81 E-value=3.5e-20 Score=87.51 Aligned_cols=68 Identities=19% Similarity=0.242 Sum_probs=35.0
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
||||+ +..|+.+++++|++.+.++ +..+..|.||||+|+..++.+++++|++. |++++.+|..|.|||
T Consensus 38 t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~L 105 (156)
T 1bd8_A 38 TALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAARTGFLDTLKVLVEH---GADVNVPDGTGALPI 105 (156)
T ss_dssp CHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCSCCCCTTSCCHH
T ss_pred cHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHc---CCCCCCcCCCCCcHH
Confidence 45555 4455555555555554444 44445555555555555555555555554 555555555555554
No 60
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.81 E-value=3e-20 Score=88.12 Aligned_cols=70 Identities=30% Similarity=0.388 Sum_probs=59.4
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+. |+.+++++|+..+.++ +..+..|+||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 39 ~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~L~ 108 (162)
T 1ihb_A 39 RTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDAARAGFLDTLQTLLEF---QADVNIEDNEGNLPLH 108 (162)
T ss_dssp CCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTSCCHHH
T ss_pred ccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCCcCCCCCCHHH
Confidence 478888888 8888888888888776 77788888899998888888888888888 8888888888888875
No 61
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.81 E-value=9.8e-20 Score=93.00 Aligned_cols=71 Identities=23% Similarity=0.344 Sum_probs=47.3
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|+..++++ +..+..|+||||+|+..|+.+++++|++. |++++..+..|.||||
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~---g~~~~~~~~~g~t~l~ 144 (299)
T 1s70_B 74 LTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAAASCGYLDIAEYLISQ---GAHVGAVNSEGDTPLD 144 (299)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTSCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHhC---CCCCCCcCCCCCCHHH
Confidence 36666666666666666666666665 55666666666666666666666666666 6666666666666653
No 62
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.81 E-value=9.1e-20 Score=93.15 Aligned_cols=71 Identities=18% Similarity=0.162 Sum_probs=65.0
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|+..+.++ +..+..|+||||+|+..|+.+++++|++. |++++.+|..|.||||
T Consensus 60 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~---ga~~~~~~~~g~t~L~ 130 (285)
T 3d9h_A 60 WSPMHEAAIHGHQLSLRNLISQGWAV-NIITADHVSPLHEACLGGHLSCVKILLKH---GAQVNGVTADWHTPLF 130 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCS-CEECTTCCCHHHHHHHTTCHHHHHHHHHT---TCCSSCCCTTCCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHCCcHHHHHHHHHC---CCCCCCCCCCCCCHHH
Confidence 58999999999999999999998886 78899999999999999999999999998 9999999999999985
No 63
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.81 E-value=1.3e-19 Score=85.54 Aligned_cols=70 Identities=19% Similarity=0.272 Sum_probs=65.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|++.+.++ +..+..|+||||+|+..++.+++++|++. ++++.+|..|.||||
T Consensus 69 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~----~~~~~~~~~g~t~l~ 138 (156)
T 1bd8_A 69 TSPVHDAARTGFLDTLKVLVEHGADV-NVPDGTGALPIHLAVQEGHTAVVSFLAAE----SDLHRRDARGLTPLE 138 (156)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHTT----SCTTCCCTTSCCHHH
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHhChHHHHHHHHhc----cCCCCcCCCCCCHHH
Confidence 58999999999999999999999887 88899999999999999999999999876 688889999999985
No 64
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.81 E-value=1e-19 Score=94.24 Aligned_cols=71 Identities=23% Similarity=0.209 Sum_probs=65.2
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|++.+.++ +..|..|+||||+|+..++.+++++|++. |++++.+|..|.||++
T Consensus 248 ~t~L~~A~~~g~~~~v~~Ll~~ga~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~---gad~~~~~~~g~tal~ 318 (351)
T 3utm_A 248 MTPLHVAAERAHNDVMEVLHKHGAKM-NALDSLGQTALHRAALAGHLQTCRLLLSY---GSDPSIISLQGFTAAQ 318 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTSCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHc---CCCCCCcCCCCCChhh
Confidence 58999999999999999999999887 88899999999999999999999999999 9999999999999874
No 65
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.81 E-value=8.5e-20 Score=91.78 Aligned_cols=71 Identities=21% Similarity=0.230 Sum_probs=66.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHh---hCCCccccccCCCchHHHHHHH--hCcHH-------HHHHHHhchhhhhcc-----
Q 038825 1 MTALLVATSQGHASLVGTIIS---HYPKCYDLVDDTGWNVLHFLTV--SLYAY-------ELNCLLKDLLFKNLI----- 63 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~---~~~~~~~~~~~~~~~~l~~a~~--~~~~~-------~~~~l~~~~~~~~~~----- 63 (75)
+||||+|+..|+.+++++|++ .+.++ +..|..|+||||+|+. .++.+ ++++|++. |+++
T Consensus 137 ~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~-n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~---ga~~~~~~~ 212 (256)
T 2etb_A 137 ELPLSLAACTKQWDVVTYLLENPHQPASL-EATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQM---GARLCPTVQ 212 (256)
T ss_dssp SSHHHHHHHTTCHHHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH---HHHHSTTCC
T ss_pred CCHHHHHHHcCCHHHHHHHHhccccCCCc-CccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHc---CCCcccccc
Confidence 489999999999999999999 88887 8889999999999998 77887 99999999 9999
Q ss_pred --ccCCCCCCCCCC
Q 038825 64 --DEKDVKGNTPLH 75 (75)
Q Consensus 64 --~~~~~~g~tplh 75 (75)
+.+|..|.||||
T Consensus 213 ~~~~~d~~g~tpL~ 226 (256)
T 2etb_A 213 LEEISNHQGLTPLK 226 (256)
T ss_dssp GGGCCCTTSCCHHH
T ss_pred cccccCCCCCCHHH
Confidence 999999999986
No 66
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.80 E-value=1.3e-19 Score=85.79 Aligned_cols=68 Identities=9% Similarity=-0.079 Sum_probs=45.9
Q ss_pred HHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 3 ALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 3 ~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
|||+|+..|+.+++++|+..+.++ +..+..|+||||+|+..++.+++++|++. |++++.++..|.||.
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~t~~ 148 (156)
T 1bi7_B 81 PVHDAAREGFLDTLVVLHRAGARL-DVRDAWGRLPVDLAEELGHRDVARYLRAA---AGGTRGSNHARIDAA 148 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHSSC---C--------------
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHhCHHHHHHHHHHc---CCCCCccCcCcCccc
Confidence 888888888888888888888876 77788888888888888888888888888 888888888888775
No 67
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.80 E-value=2.4e-19 Score=90.58 Aligned_cols=70 Identities=14% Similarity=0.111 Sum_probs=61.3
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|++.+.++ +. +..|.||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 135 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~---gad~~~~d~~g~tpl~ 204 (261)
T 2xai_A 135 GTPLYLACENQQRACVKKLLESGADV-NQ-GKGQDSPLHAVARTASEELACLLMDF---GADTQAKNAEGKRPVE 204 (261)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHHTCCT-TC-CBTTBCHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTSCCGGG
T ss_pred CCHHHHHHHhCCHHHHHHHHHcCCCC-CC-CCCCCChHHHHHHcCCHHHHHHHHHc---CCCCCCcCCCCCChhh
Confidence 37899999999999999999888876 43 77889999999999999999999998 9999999999999986
No 68
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.80 E-value=1.3e-19 Score=93.82 Aligned_cols=71 Identities=24% Similarity=0.201 Sum_probs=64.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|++.+.++ +..+..|+||||+|+..|+.+++++|++. |++++..+..|.||||
T Consensus 59 ~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~---g~~~~~~~~~g~t~L~ 129 (351)
T 3utm_A 59 STPLHLAAGYNRVRIVQLLLQHGADV-HAKDKGGLVPLHNACSYGHYEVTELLLKH---GACVNAMDLWQFTPLH 129 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTCCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHCCCHHHHHHHHHC---CCCCCCCCCCCCCHHH
Confidence 48999999999999999999998887 77888999999999999999999999998 8999999999999875
No 69
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.80 E-value=3.9e-20 Score=92.93 Aligned_cols=70 Identities=21% Similarity=0.243 Sum_probs=65.4
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCC-CCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKD-VKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~-~~g~tplh 75 (75)
+||||+|+..|+.++++.|+. +.++ +..+..|+||||+|+..|+.+++++|++. |++++.++ ..|.||||
T Consensus 46 ~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~---ga~~~~~~~~~g~t~L~ 116 (244)
T 3ui2_A 46 ETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEA---GADLDHRDMRGGLTALH 116 (244)
T ss_dssp HHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHT---TCCTTCCCSSSCCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHc---CCCCCcCCCCCCCCHHH
Confidence 379999999999999999999 7776 88899999999999999999999999999 99999998 78999986
No 70
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.80 E-value=1.3e-20 Score=89.29 Aligned_cols=69 Identities=17% Similarity=0.206 Sum_probs=43.6
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCch-HHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWN-VLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~-~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
||||+|+ .|+.+++++|+..+.++ +..+..|+| |||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 47 t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~---ga~~~~~d~~g~tpl~ 116 (156)
T 1bi7_B 47 RPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVHDAAREGFLDTLVVLHRA---GARLDVRDAWGRLPVD 116 (156)
T ss_dssp CTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHHHHHHHTCHHHHHHHHHH---TCCSSCCCTTCCCHHH
T ss_pred CHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHHCCCHHHHHHHHHc---CCCCcccCCCCCCHHH
Confidence 4445442 45555555555555444 555666666 77777777777777777777 7777777777777764
No 71
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.80 E-value=1.3e-19 Score=90.16 Aligned_cols=71 Identities=18% Similarity=0.148 Sum_probs=50.7
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|+..+.++ +..+..|.||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 145 ~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---gad~~~~d~~g~t~l~ 215 (237)
T 3b7b_A 145 NICLHWAAFSGCVDIAEILLAAKCDL-HAVNIHGDSPLHIAARENRYDCVVLFLSR---DSDVTLKNKEGETPLQ 215 (237)
T ss_dssp CCHHHHHHHHCCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTT---TCCTTCCCTTSCCHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhCCHhHHHHHHHc---CCCCCccCCCCCCHHH
Confidence 36777777777777777777777665 66667777777777777777777777777 7777777777777764
No 72
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.80 E-value=1.7e-19 Score=89.25 Aligned_cols=71 Identities=18% Similarity=0.105 Sum_probs=53.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhh-hccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFK-NLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~-~~~~~~~~~g~tplh 75 (75)
+||||+|+..++.+++++|++.+.++ +..+..|+||||+|+..++.+++++|++. | ++++.+|..|.||||
T Consensus 108 ~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~d~~g~t~L~ 179 (228)
T 2dzn_A 108 VTCLHLAVGKKWFEVSQFLIENGASV-RIKDKFNQIPLHRAASVGSLKLIELLCGL---GKSAVNWQDKQGWTPLF 179 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHTT---TCCCSCCCCTTSCCHHH
T ss_pred CCHHHHHHHcCCHhHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHhc---CcccccCcCCCCCCHHH
Confidence 36777777777777777777777765 66677777777777777777777777777 6 777777777777765
No 73
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.80 E-value=1.5e-19 Score=89.65 Aligned_cols=71 Identities=21% Similarity=0.239 Sum_probs=51.7
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|+..+.++ +..+..|.||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 140 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~t~l~ 210 (231)
T 3aji_A 140 ATAMHRAAAKGNLKMVHILLFYKAST-NIQDTEGNTPLHLACDEERVEEAKFLVTQ---GASIYIENKEEKTPLQ 210 (231)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCSCCCCTTSCCHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCc-cccCCCCCCHHHHHHHCCCHHHHHHHHHC---CCCCCCCCCCCCCHHH
Confidence 36777777777777777777777665 66677777777777777777777777777 7777777777777764
No 74
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.80 E-value=1.3e-19 Score=91.22 Aligned_cols=71 Identities=20% Similarity=0.165 Sum_probs=65.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHh---hCCCccccccCCCchHHHHHHHhCc---------HHHHHHHHhchhhhhcc-----
Q 038825 1 MTALLVATSQGHASLVGTIIS---HYPKCYDLVDDTGWNVLHFLTVSLY---------AYELNCLLKDLLFKNLI----- 63 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~---~~~~~~~~~~~~~~~~l~~a~~~~~---------~~~~~~l~~~~~~~~~~----- 63 (75)
+||||+|+..|+.+++++|+. .+.++ +..|..|+||||+|+..++ .+++++|++. |+++
T Consensus 141 ~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~-~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~---ga~~~~~~~ 216 (260)
T 3jxi_A 141 ELPLSLAACTNQPHIVHYLTENGHKQADL-RRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIK---CAKLFPDTN 216 (260)
T ss_dssp SSHHHHHHHTTCHHHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHH---HHHHCTTCC
T ss_pred CCHHHHHHHcCCHHHHHHHHhccccCCCC-cccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHh---Ccccccccc
Confidence 489999999999999999999 88887 8889999999999998887 6899999999 9998
Q ss_pred --ccCCCCCCCCCC
Q 038825 64 --DEKDVKGNTPLH 75 (75)
Q Consensus 64 --~~~~~~g~tplh 75 (75)
+.+|..|.||||
T Consensus 217 ~~~~~d~~g~tpL~ 230 (260)
T 3jxi_A 217 LEALLNNDGLSPLM 230 (260)
T ss_dssp GGGCCCTTSCCHHH
T ss_pred hhhcccCCCCCHHH
Confidence 779999999986
No 75
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.80 E-value=8.5e-20 Score=95.47 Aligned_cols=70 Identities=17% Similarity=0.124 Sum_probs=34.4
Q ss_pred cHHHHHHHcC--CHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhc-----cccCCCCCCCCC
Q 038825 2 TALLVATSQG--HASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNL-----IDEKDVKGNTPL 74 (75)
Q Consensus 2 t~lh~a~~~~--~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~g~tpl 74 (75)
||||+|+..| +.+++++|+..+.++ +..+..|+||||+|+..++.+++++|++. |++ ++.+|..|.|||
T Consensus 140 t~L~~A~~~g~~~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~---g~~~~~~~~~~~~~~g~t~L 215 (364)
T 3ljn_A 140 TALHWCVGLGPEYLEMIKILVQLGASP-TAKDKADETPLMRAMEFRNREALDLMMDT---VPSKSSLRLDYANKQGNSHL 215 (364)
T ss_dssp CHHHHHHHSCGGGHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHH---CSCSSSCCTTCCCTTCCCTT
T ss_pred CHHHHHHHcCCchHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHhc---ccccccccccccCCCCCcHH
Confidence 4555555555 455555555554443 44444455555555555555555555544 443 444444455544
Q ss_pred C
Q 038825 75 H 75 (75)
Q Consensus 75 h 75 (75)
|
T Consensus 216 ~ 216 (364)
T 3ljn_A 216 H 216 (364)
T ss_dssp H
T ss_pred H
Confidence 3
No 76
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.80 E-value=2.7e-19 Score=88.29 Aligned_cols=69 Identities=14% Similarity=0.043 Sum_probs=42.3
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
||||+|+..++.+++++|++.+.++ +..+..|.||||+|+..++.+++++|++. |++++.++..|.|||
T Consensus 127 t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~t~l 195 (223)
T 2f8y_A 127 SALHWAAAVNNVDAAVVLLKNGANK-DMQNNREETPLFLAAREGSYETAKVLLDH---FANRDITDHMDRLPR 195 (223)
T ss_dssp BHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTCCCHH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCcCHHHHHHHcCCHHHHHHHHHc---CCCCccccccCCCHH
Confidence 5666666666666666666665554 55555666666666666666666666666 666666666666654
No 77
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.79 E-value=1.1e-19 Score=91.38 Aligned_cols=71 Identities=24% Similarity=0.316 Sum_probs=54.8
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..++.+++++|+..+.++ +..+..|+||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 125 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~tpL~ 195 (253)
T 1yyh_A 125 TTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKSALHWAAAVNNVDAAVVLLKN---GANKDMQNNREETPLF 195 (253)
T ss_dssp CCHHHHHHHHTCSSHHHHHHHTTCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTSCCHHH
T ss_pred CcHHHHHHHcChHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCCcCCCCCCHHH
Confidence 36777777777777777777777765 66777788888888888888888888877 7888888888888775
No 78
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.79 E-value=1.6e-19 Score=96.14 Aligned_cols=71 Identities=27% Similarity=0.316 Sum_probs=57.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|++.++++ +..+..|+||||+|+..++.+++++|++. |++++.+|.+|.|||+
T Consensus 312 ~t~L~~A~~~g~~~~v~~Ll~~gad~-n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~---ga~~~~~~~~g~t~l~ 382 (437)
T 1n11_A 312 YTPLHVASHYGNIKLVKFLLQHQADV-NAKTKLGYSPLHQAAQQGHTDIVTLLLKN---GASPNEVSSDGTTPLA 382 (437)
T ss_dssp CCHHHHHHHSSCSHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCSCCCCSSSCCHHH
T ss_pred CCHHHHHHHcCcHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHCChHHHHHHHHHC---cCCCCCCCCCCCCHHH
Confidence 47888888888888888888888776 77778888888888888888888888887 8888888888888764
No 79
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.79 E-value=4e-19 Score=86.57 Aligned_cols=71 Identities=14% Similarity=0.140 Sum_probs=40.7
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
||||+|+..|+.+++++|++.+.++ +..+..|+||||+|+..++.+++++|++.. +.+++.++..|.||||
T Consensus 41 t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~--~~~~~~~~~~g~t~L~ 111 (201)
T 3hra_A 41 TPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYAGAQGRTEILAYMLKHA--TPDLNKHNRYGGNALI 111 (201)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHS--CCCTTCCCTTSCCSHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhcc--CcccccccCCCCcHHH
Confidence 5566666666666666666655554 455555566666666666666666555332 4455555555555553
No 80
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.79 E-value=3e-19 Score=88.53 Aligned_cols=71 Identities=30% Similarity=0.397 Sum_probs=46.7
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|++.+.++ +..+..|+||||+|+..++.+++++|++. |.+++.++..|.||||
T Consensus 41 ~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~L~ 111 (231)
T 3aji_A 41 RTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIAASAGXDEIVKALLVK---GAHVNAVNQNGCTPLH 111 (231)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTSCCHHH
T ss_pred CCHHHHHHHcCcHHHHHHHHHhCCCC-CCcCCCCCCHHHHHHHcCHHHHHHHHHHc---CCCCCCCCCCCCCHHH
Confidence 35666666666666666666666654 55566666666666666666666666666 6666666666666654
No 81
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.79 E-value=3.7e-19 Score=87.83 Aligned_cols=71 Identities=24% Similarity=0.316 Sum_probs=51.0
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..++.+++++|+..+.++ +..+..|.||||+|+..++.+++++|++. |++++.++..|.||||
T Consensus 93 ~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~L~ 163 (223)
T 2f8y_A 93 TTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKSALHWAAAVNNVDAAVVLLKN---GANKDMQNNREETPLF 163 (223)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTCCCHHH
T ss_pred CcHHHHHHHhCcHHHHHHHHHcCCCC-cCcCCCCCcHHHHHHHcCCHHHHHHHHHc---CCCCCCcCCCCcCHHH
Confidence 36777777777777777777766665 66667777777777777777777777777 7777777777777764
No 82
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.79 E-value=1e-19 Score=93.00 Aligned_cols=71 Identities=15% Similarity=0.062 Sum_probs=45.2
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCC-CCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKG-NTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g-~tplh 75 (75)
+||||+|+..|+.+++++|+..++++ +..+..|+||||+|+..++.+++++|++. |++++.++..| .||||
T Consensus 63 ~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~---ga~~~~~~~~g~~t~L~ 134 (285)
T 3kea_A 63 EFPLHQAATLEDTKIVKILLFSGLDD-SQFDDKGNTALYYAVDSGNMQTVKLFVKK---NWRLMFYGKTGWKTSFY 134 (285)
T ss_dssp CCHHHHHTTSSSCHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHH---CGGGGGCSSSGGGSHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHhc---CCCCCccCCCCCCCHHH
Confidence 35666666666666666666666655 55566666666666666666666666666 66666666666 56654
No 83
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.79 E-value=1.5e-19 Score=91.96 Aligned_cols=69 Identities=28% Similarity=0.297 Sum_probs=38.3
Q ss_pred HHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 3 ALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 3 ~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
|+|+|+..++.++++.|+..+.++ +..|..|+||||+|+..|+.+++++|++. |++++.++..|.||||
T Consensus 122 ~l~~a~~~~~~~~~~~Ll~~g~~~-n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~---gadvn~~~~~g~t~Lh 190 (269)
T 4b93_B 122 PLHLACQQGHFQVVKCLLDSNAKP-NKKDLSGNTPLIYACSGGHHELVALLLQH---GASINASNNKGNTALH 190 (269)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTCGGGHHHHHHT---TCCTTCBCTTSCBHHH
T ss_pred ccccccccChHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHHC---CCCCCccccCCCcHHH
Confidence 344444444444444444444443 44555666666666666666666666666 6666666666666654
No 84
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.79 E-value=8.4e-20 Score=82.69 Aligned_cols=70 Identities=14% Similarity=0.108 Sum_probs=64.0
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
+||||+|+..++.+++++|+..+.++ +..+..|+|||++|+..++.+++++|++. |++++.++..|.+|-
T Consensus 43 ~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~---ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 43 NTPLHLAAKNGHAEIVKLLLAKGADV-NARSKDGNTPEHLAKKNGHHEIVKLLDAK---GADVNARSWGSSHHH 112 (115)
T ss_dssp CCTTHHHHTTTCHHHHHHHTTTTCCT-TCCCTTCCCTTHHHHTTTCHHHHHHHHTT---SSSHHHHSCCCC---
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHCCCHHHHHHHHHc---CCCCCcCCccccccc
Confidence 58999999999999999999999987 88899999999999999999999999999 999999999999873
No 85
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.79 E-value=3.7e-19 Score=92.38 Aligned_cols=71 Identities=14% Similarity=0.008 Sum_probs=63.8
Q ss_pred CcHHHHHHH----cCCHHHHHHHHhhCC---------------------------------------------Ccccccc
Q 038825 1 MTALLVATS----QGHASLVGTIISHYP---------------------------------------------KCYDLVD 31 (75)
Q Consensus 1 ~t~lh~a~~----~~~~~~~~~ll~~~~---------------------------------------------~~~~~~~ 31 (75)
+||||+|+. .|+.++++.+++.+. ++ +..|
T Consensus 202 ~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~-n~~d 280 (327)
T 1sw6_A 202 RTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANML-NAQD 280 (327)
T ss_dssp CCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTT-TCCC
T ss_pred CCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCC-CCCC
Confidence 589999999 899999999987632 22 6678
Q ss_pred CCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 32 DTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 32 ~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
..|+||||+|+..|+.+++++|++. |++++.+|..|.||||
T Consensus 281 ~~G~TpLh~A~~~g~~~~v~~Ll~~---Gad~~~~d~~G~TpL~ 321 (327)
T 1sw6_A 281 SNGDTCLNIAARLGNISIVDALLDY---GADPFIANKSGLRPVD 321 (327)
T ss_dssp TTSCCHHHHHHHHCCHHHHHHHHHT---TCCTTCCCTTSCCGGG
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHc---CCCCcccCCCCCCHHH
Confidence 8999999999999999999999999 9999999999999997
No 86
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.79 E-value=7.9e-19 Score=89.70 Aligned_cols=70 Identities=14% Similarity=0.108 Sum_probs=61.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|+..+.++ + .+..|.||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 191 ~t~L~~A~~~~~~~~v~~Ll~~ga~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~---gad~~~~d~~g~t~l~ 260 (285)
T 3d9h_A 191 GTPLYLACENQQRACVKKLLESGADV-N-QGKGQDSPLHAVVRTASEELACLLMDF---GADTQAKNAEGKRPVE 260 (285)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHTTCCT-T-CCBTTBCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCGGG
T ss_pred CCHHHHHHHcCcHHHHHHHHHCCCCC-C-CCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCCCCcCCCCCCHHH
Confidence 47899999999999999999888876 4 378889999999999999999999998 9999999999999986
No 87
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.78 E-value=2.8e-19 Score=94.09 Aligned_cols=71 Identities=15% Similarity=0.146 Sum_probs=66.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhC-CCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHY-PKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|+..+ .++ +..|..|+||||+|+..|+.+++++|++. |++++.+|..|.||||
T Consensus 280 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~-n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~---gad~~~~d~~g~t~l~ 351 (373)
T 2fo1_E 280 RTALHYAAQVSNMPIVKYLVGEKGSNK-DKQDEDGKTPIMLAAQEGRIEVVMYLIQQ---GASVEAVDATDHTARQ 351 (373)
T ss_dssp CCTHHHHHSSCCHHHHHHHHHHSCCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHT---TCCSSCCCSSSCCHHH
T ss_pred CCHHHHHHHhCCHHHHHHHHHhcCCCc-cCcCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCccCCCCCCCCHHH
Confidence 48999999999999999999887 555 88899999999999999999999999999 9999999999999985
No 88
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.78 E-value=3.7e-19 Score=90.17 Aligned_cols=71 Identities=23% Similarity=0.197 Sum_probs=65.2
Q ss_pred CcHHHHHHHcCCHHHHHHHHh---hCCCccccccCCCchHHHHHHHhCc---------HHHHHHHHhchhhhhccc----
Q 038825 1 MTALLVATSQGHASLVGTIIS---HYPKCYDLVDDTGWNVLHFLTVSLY---------AYELNCLLKDLLFKNLID---- 64 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~---~~~~~~~~~~~~~~~~l~~a~~~~~---------~~~~~~l~~~~~~~~~~~---- 64 (75)
+||||+|+..|+.+++++|++ .+.++ +..|..|+||||+|+..++ .+++++|++. |++++
T Consensus 149 ~tpL~~A~~~g~~~~v~~Ll~~~~~gad~-~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~---ga~~n~~~~ 224 (273)
T 2pnn_A 149 ELPLSLAACTNQLAIVKFLLQNSWQPADI-SARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILIL---GAKLHPTLK 224 (273)
T ss_dssp BSHHHHHHHTTCHHHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH---HHHHCTTCC
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccCCCCc-eeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHh---hhhcccccc
Confidence 489999999999999999999 88887 8889999999999999887 7899999999 99986
Q ss_pred ---cCCCCCCCCCC
Q 038825 65 ---EKDVKGNTPLH 75 (75)
Q Consensus 65 ---~~~~~g~tplh 75 (75)
.+|..|.||||
T Consensus 225 ~~~~~d~~g~TpL~ 238 (273)
T 2pnn_A 225 LEEITNRKGLTPLA 238 (273)
T ss_dssp GGGCCCTTSCCHHH
T ss_pred cccccCCCCCCHHH
Confidence 48999999986
No 89
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.78 E-value=1e-18 Score=91.40 Aligned_cols=71 Identities=15% Similarity=0.177 Sum_probs=67.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCC-----ccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPK-----CYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~-----~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|+..+++ + +..+..|+||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 174 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~---gad~~~~d~~g~tpL~ 249 (364)
T 3ljn_A 174 ETPLMRAMEFRNREALDLMMDTVPSKSSLRL-DYANKQGNSHLHWAILINWEDVAMRFVEM---GIDVNMEDNEHTVPLY 249 (364)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCSCSSSCCT-TCCCTTCCCTTHHHHTTTCHHHHHHHHTT---TCCTTCCCTTSCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccccccccc-cccCCCCCcHHHHHHHcCCHHHHHHHHHc---CCCCCCCCCCCCCHHH
Confidence 5899999999999999999999987 5 77899999999999999999999999999 9999999999999985
No 90
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.78 E-value=4.4e-19 Score=86.44 Aligned_cols=70 Identities=21% Similarity=0.223 Sum_probs=44.4
Q ss_pred cHHHHHHHcCCHHHHHHHHhhC-CCccccccCCCchHHHHHHHhCc-----HHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHY-PKCYDLVDDTGWNVLHFLTVSLY-----AYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~l~~a~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
||||+|+..|+.+++++|+..+ .++ +..+..|+||||+|+..+. .+++++|++. |++++.+|..|.||||
T Consensus 108 t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~---ga~~~~~~~~g~t~l~ 183 (201)
T 3hra_A 108 NALIPAAEKGHIDNVKLLLEDGREDI-DFQNDFGYTALIEAVGLREGNQLYQDIVKLLMEN---GADQSIKDNSGRTAMD 183 (201)
T ss_dssp CSHHHHHHTTCHHHHHHHHHHCCCCT-TCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHT---TCCTTCCCTTSCCHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCc-CCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHC---CCCCCccCCCCCCHHH
Confidence 5666666666666666666666 333 5556666666666666655 6666666666 6666666666666653
No 91
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.78 E-value=4.2e-19 Score=88.10 Aligned_cols=71 Identities=25% Similarity=0.215 Sum_probs=65.3
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHH----HHHHhchhhhhcc------ccCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYEL----NCLLKDLLFKNLI------DEKDVKG 70 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~----~~l~~~~~~~~~~------~~~~~~g 70 (75)
+||||+|+..|+.+++++|++.+.++ +..|..|+||||+|+..++.+++ ++|++. |++. +.+|..|
T Consensus 122 ~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~---g~~~~~~~~~~~~~~~g 197 (232)
T 2rfa_A 122 EHPLSFAACVGSEEIVRLLIEHGADI-RAQDSLGNTVLHILILQPNKTFACQMYNLLLSY---DGGDHLKSLELVPNNQG 197 (232)
T ss_dssp SSHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHT---TCSCSSCCGGGCCCTTS
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhc---CCchhhhhhhccCCCCC
Confidence 48999999999999999999999987 88899999999999999999888 899988 8877 5889999
Q ss_pred CCCCC
Q 038825 71 NTPLH 75 (75)
Q Consensus 71 ~tplh 75 (75)
.||||
T Consensus 198 ~tpl~ 202 (232)
T 2rfa_A 198 LTPFK 202 (232)
T ss_dssp CCHHH
T ss_pred CCHHH
Confidence 99985
No 92
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.78 E-value=7.8e-19 Score=87.30 Aligned_cols=71 Identities=25% Similarity=0.326 Sum_probs=53.9
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..++.+++++|++.+.++ +..+..|.||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 112 ~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~~~~~g~t~L~ 182 (237)
T 3b7b_A 112 WTPMIWATEYKHVDLVKLLLSKGSDI-NIRDNEENICLHWAAFSGCVDIAEILLAA---KCDLHAVNIHGDSPLH 182 (237)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHCCHHHHHHHHTT---TCCTTCCCTTCCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCC-CccCCCCCCHHHHHHHCCCHHHHHHHHHc---CCCCCCcCCCCCCHHH
Confidence 36777777777777777777777765 66677777788877777777777777777 7777777777777764
No 93
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.78 E-value=5.1e-19 Score=94.20 Aligned_cols=71 Identities=24% Similarity=0.287 Sum_probs=43.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|+..+.++ +..+..+.||||+|+..|+.+++++|++. |++++.++..|.||||
T Consensus 15 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~---g~~~~~~~~~g~t~L~ 85 (437)
T 1n11_A 15 LTPLHVASFMGHLPIVKNLLQRGASP-NVSNVKVETPLHMAARAGHTEVAKYLLQN---KAKVNAKAKDDQTPLH 85 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCS-CCSSSCCCCHHHHHHHHTCHHHHHHHHHH---TCCSSCCCTTSCCHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhC---CCCCCCCCCCCCCHHH
Confidence 35666666666666666666665554 45555566666666666666666666665 5666666666666553
No 94
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.77 E-value=2.6e-19 Score=92.96 Aligned_cols=72 Identities=25% Similarity=0.150 Sum_probs=65.2
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCc---HHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLY---AYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~---~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|++.++++ +..+..|+||||+|+..++ .+++..|++.. ..+++.+|..|.||||
T Consensus 132 ~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~--~~~~~~~d~~g~tpLh 206 (327)
T 1sw6_A 132 NTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNYDSGTFEALLDYL--YPCLILEDSMNRTILH 206 (327)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHH--GGGGGEECTTCCCHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhcccccHHHHHHHHHhh--hccccCCCCCCCCHHH
Confidence 58999999999999999999999987 8889999999999999988 67788888873 4789999999999986
No 95
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.77 E-value=9.7e-19 Score=88.44 Aligned_cols=71 Identities=18% Similarity=0.148 Sum_probs=47.9
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|+..+.++ +..+..|.||||+|+..++.+++++|++. |++++.++..|.||||
T Consensus 40 ~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~L~ 110 (285)
T 1wdy_A 40 WTPLHNAVQMSREDIVELLLRHGADP-VLRKKNGATPFLLAAIAGSVKLLKLFLSK---GADVNECDFYGFTAFM 110 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHT---TCCTTCBCTTCCBHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCccCcccCCHHH
Confidence 35677777777777777777666665 55666666777777777777777777666 6666666666666654
No 96
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.77 E-value=9.9e-19 Score=86.98 Aligned_cols=71 Identities=23% Similarity=0.246 Sum_probs=57.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCcccccc-CCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVD-DTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..++.+++++|+..+.++ +..+ ..|.||||+|+..++.+++++|++. |++++.+|..|.||||
T Consensus 117 ~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~L~ 188 (241)
T 1k1a_A 117 LTALHVAVNTECQETVQLLLERGADI-DAVDIKSGRSPLIHAVENNSLSMVQLLLQH---GANVNAQMYSGSSALH 188 (241)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCBCTTSCBHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCc-ccccccCCCcHHHHHHHcCCHHHHHHHHHc---CCCCCCcCCCCCCHHH
Confidence 47888888888888888888888776 5555 6788888888888888888888888 8888888888888875
No 97
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.77 E-value=1.4e-18 Score=88.51 Aligned_cols=72 Identities=19% Similarity=0.161 Sum_probs=61.4
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCC-Cc-------------------------------------cccccCCCchHHHHHH
Q 038825 1 MTALLVATSQGHASLVGTIISHYP-KC-------------------------------------YDLVDDTGWNVLHFLT 42 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~-~~-------------------------------------~~~~~~~~~~~l~~a~ 42 (75)
+||||+|+..|+.+++++|+..++ ++ ....+..|+||||+|+
T Consensus 112 ~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~ 191 (276)
T 4hbd_A 112 NTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAV 191 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence 589999999999999999998886 22 0123455889999999
Q ss_pred HhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 43 VSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 43 ~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
..|+.+++++|++. |++++.+|..|.||||
T Consensus 192 ~~g~~~~v~~Ll~~---gad~n~~d~~G~TpLh 221 (276)
T 4hbd_A 192 SHGRVDVVKALLAC---EADVNVQDDDGSTALM 221 (276)
T ss_dssp HTTCHHHHHHHHHT---TCCTTCCCTTSCCHHH
T ss_pred HcCCHHHHHHHHhC---CCCCCCCCCCCCCHHH
Confidence 99999999999999 9999999999999986
No 98
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.77 E-value=7.5e-20 Score=89.05 Aligned_cols=71 Identities=13% Similarity=-0.002 Sum_probs=63.6
Q ss_pred CcHHHHHHHcCC------HHHHHHHHhhCCCccccccCCCc-hHHHHHHHhC-----cHHHHHHHHh-chhhhhccccCC
Q 038825 1 MTALLVATSQGH------ASLVGTIISHYPKCYDLVDDTGW-NVLHFLTVSL-----YAYELNCLLK-DLLFKNLIDEKD 67 (75)
Q Consensus 1 ~t~lh~a~~~~~------~~~~~~ll~~~~~~~~~~~~~~~-~~l~~a~~~~-----~~~~~~~l~~-~~~~~~~~~~~~ 67 (75)
+||||+|+..++ .+++++|+..|+++ +..|..|. ||||+|+..+ ..+++++|++ . |++++.+|
T Consensus 76 ~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadi-n~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~---gad~~~~d 151 (186)
T 3t8k_A 76 TTLFFPLFQGGGNDITGTTELCKIFLEKGADI-TALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQS---GLQLLIKD 151 (186)
T ss_dssp CCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCS-SSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTST---TCCTTCCC
T ss_pred CcHHHHHHHcCCcchhhHHHHHHHHHHCCCCC-CccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhc---CCCCcccC
Confidence 589999999886 57899999999998 88999999 9999999844 4568999999 7 99999999
Q ss_pred CCCCCCCC
Q 038825 68 VKGNTPLH 75 (75)
Q Consensus 68 ~~g~tplh 75 (75)
..|.||||
T Consensus 152 ~~G~TpL~ 159 (186)
T 3t8k_A 152 KWGLTALE 159 (186)
T ss_dssp TTSCCHHH
T ss_pred CCCCCHHH
Confidence 99999986
No 99
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.77 E-value=4.7e-19 Score=90.59 Aligned_cols=69 Identities=23% Similarity=0.086 Sum_probs=64.0
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|+..+.++ +.. +|+||||+|+..|+.+++++|++. |++++.++..|.||||
T Consensus 32 ~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~--~g~t~L~~A~~~g~~~~v~~Ll~~---ga~~~~~d~~g~t~L~ 100 (285)
T 3kea_A 32 HSASYYAIADNNVRLVCTLLNAGALK-NLL--ENEFPLHQAATLEDTKIVKILLFS---GLDDSQFDDKGNTALY 100 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTGGG-SCC--TTCCHHHHHTTSSSCHHHHHHHHT---TCCTTCCCTTSCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCC-CCC--CCCCHHHHHHHcCCHHHHHHHHHC---CCCCCCcCCCCCcHHH
Confidence 58999999999999999999999876 444 589999999999999999999999 9999999999999986
No 100
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.76 E-value=2.7e-18 Score=85.48 Aligned_cols=72 Identities=22% Similarity=0.295 Sum_probs=59.3
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCc-----cccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCC-CCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKC-----YDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDV-KGNTPL 74 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~-----~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~tpl 74 (75)
+||||+|+..|+.+++++|+..+... ....+..|.||||+|+..++.+++++|++. |++++.++. .|.|||
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~~g~tpL 155 (236)
T 1ikn_D 79 NTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSL---GADVNAQEPCNGRTAL 155 (236)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHH---TCCTTCCCTTTCCCHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCCCCCCCCCCHH
Confidence 47888888888888888888877542 355677788999999999999999999888 888888887 888887
Q ss_pred C
Q 038825 75 H 75 (75)
Q Consensus 75 h 75 (75)
|
T Consensus 156 ~ 156 (236)
T 1ikn_D 156 H 156 (236)
T ss_dssp H
T ss_pred H
Confidence 5
No 101
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.76 E-value=2.4e-18 Score=89.31 Aligned_cols=69 Identities=19% Similarity=0.264 Sum_probs=60.5
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccC-CCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDD-TGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~-~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
|+||.|+..|+.++|++|++.|+++ +..+. .|+||||+|+..|+.+++++|++. |++++.++..+.+|+
T Consensus 27 t~L~~Av~~g~~~~V~~LL~~Gadv-n~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~---ga~~~~~~~~~~~~~ 96 (337)
T 4g8k_A 27 HLLIKAVQNEDVDLVQQLLEGGANV-NFQEEEGGWTPLHNAVQMSREDIVELLLRH---GADPVLRKKNGATPF 96 (337)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTCCCHH
T ss_pred hHHHHHHHcCCHHHHHHHHHCCCCC-CccCCCCCcCHHHHHHHcCCHHHHHHHHHc---CCchhhhccCCCchh
Confidence 6899999999999999999999987 65554 599999999999999999999998 888777777666654
No 102
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.74 E-value=1.7e-17 Score=72.75 Aligned_cols=55 Identities=22% Similarity=0.252 Sum_probs=52.7
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhc
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKD 56 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~ 56 (75)
+||||+|+..++.+++++|++.++++ +..|..|+||||+|+..++.+++++|++.
T Consensus 36 ~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ 90 (93)
T 1n0q_A 36 RTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEA 90 (93)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 58999999999999999999999987 88899999999999999999999999988
No 103
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.74 E-value=5.9e-18 Score=89.11 Aligned_cols=74 Identities=20% Similarity=0.179 Sum_probs=67.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|+..++++ +..+..|.||||+|+..++.+++++|++....+.+++..+..|.||||
T Consensus 167 ~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~ 240 (373)
T 2fo1_E 167 NTPLMLAVLARRRRLVAYLMKAGADP-TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALM 240 (373)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHH
T ss_pred CCHHHHHHHcChHHHHHHHHHCCCCC-cccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHH
Confidence 58999999999999999999999987 788999999999999999999999999983223899999999999985
No 104
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.73 E-value=2.2e-17 Score=85.17 Aligned_cols=65 Identities=17% Similarity=0.066 Sum_probs=60.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|+..++++ +..|..|.|||++|+..++.+++++|++. |++ .|.||||
T Consensus 227 ~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~---ga~------~g~tpLh 291 (301)
T 2b0o_E 227 NTALHYAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQA---QAG------TFAFPLH 291 (301)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCC-SCCCTTSCCHHHHHHHHTCHHHHHHHHHH---HHH------TTSSCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHh---cCC------CCCChhH
Confidence 58999999999999999999999997 88999999999999999999999999998 765 5789987
No 105
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.73 E-value=1.3e-17 Score=82.75 Aligned_cols=70 Identities=23% Similarity=0.041 Sum_probs=33.1
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPL 74 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tpl 74 (75)
||||+|+..|+.+++++|++.+.+.....+..|.+||++|+..++.+++++|++. |++++.++..|.|||
T Consensus 44 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~l 113 (240)
T 3eu9_A 44 TLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKY---GADPSLIDGEGCSCI 113 (240)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTSCCHH
T ss_pred CHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHc---CCCCcccCCCCCCHH
Confidence 4455555555555555555544443222233344555555555555555555444 444444444444444
No 106
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.72 E-value=1.6e-17 Score=83.95 Aligned_cols=71 Identities=18% Similarity=0.237 Sum_probs=65.7
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccc-cCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLV-DDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~-~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+|+||.|+..|+.+++++|+..+.++ +.. +..|+||||+|+..|+.+++++|++. |++++.++..|.||||
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~---g~~~~~~~~~g~t~L~ 77 (285)
T 1wdy_A 6 NHLLIKAVQNEDVDLVQQLLEGGANV-NFQEEEGGWTPLHNAVQMSREDIVELLLRH---GADPVLRKKNGATPFL 77 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTCCCHHH
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCc-ccccCCCCCcHHHHHHHcCCHHHHHHHHHc---CCCCcccCCCCCCHHH
Confidence 37999999999999999999999887 544 78899999999999999999999999 9999999999999986
No 107
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.72 E-value=2.5e-17 Score=81.71 Aligned_cols=71 Identities=28% Similarity=0.306 Sum_probs=60.9
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
+||||+|+..|+.+++++|++.+.++ +..+..|.+|||+|+..++.+++++|++. |++++.++..|.||||
T Consensus 77 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~---~~~~~~~~~~g~t~l~ 147 (240)
T 3eu9_A 77 STPLHWATRQGHLSMVVQLMKYGADP-SLIDGEGCSCIHLAAQFGHTSIVAYLIAK---GQDVDMMDQNGMTPLM 147 (240)
T ss_dssp BCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHH
T ss_pred CChhHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCHHHHHHHHHhc---CCCccccCCCCCcHHH
Confidence 37889999999999999888888876 77788888999999988888999988888 8888888888888875
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.71 E-value=1.3e-17 Score=88.06 Aligned_cols=70 Identities=19% Similarity=0.246 Sum_probs=65.8
Q ss_pred cHHHHHHHc-CCHHHHHHHHhhCCCcccccc--CCCchHHHHHHHhCcHHHHHHHHhchhhhhccccCCCCCCCCCC
Q 038825 2 TALLVATSQ-GHASLVGTIISHYPKCYDLVD--DTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEKDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~-~~~~~~~~ll~~~~~~~~~~~--~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~tplh 75 (75)
|+||.|+.. ++.++++.|+..+.++ +..+ ..|+||||+|+..++.+++++|+.. |++++.+|..|.||||
T Consensus 201 t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~---Gadvn~~d~~G~TpLh 273 (368)
T 3jue_A 201 ALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQN---GANVNQADSAGRGPLH 273 (368)
T ss_dssp HHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHH
T ss_pred cHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHc---CCCCCCCCCCCCCHHH
Confidence 589999999 9999999999999987 6666 8899999999999999999999999 9999999999999986
No 109
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.67 E-value=1.6e-16 Score=86.36 Aligned_cols=69 Identities=19% Similarity=0.157 Sum_probs=63.6
Q ss_pred HHHHHHHcCCHHHHHHHHhhCCCccccc------cCCCchHHHHHHH---hCcHHHHHHHHhchhhhhccccCCCCCCCC
Q 038825 3 ALLVATSQGHASLVGTIISHYPKCYDLV------DDTGWNVLHFLTV---SLYAYELNCLLKDLLFKNLIDEKDVKGNTP 73 (75)
Q Consensus 3 ~lh~a~~~~~~~~~~~ll~~~~~~~~~~------~~~~~~~l~~a~~---~~~~~~~~~l~~~~~~~~~~~~~~~~g~tp 73 (75)
.||.|+..|+.+.++.|+..+.++ +.. +..|+||||+|+. .|+.+++++|++. |++++.+|..|.||
T Consensus 135 ~L~~A~~~g~~~~v~~ll~~g~~~-n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~---ga~vn~~d~~g~Tp 210 (497)
T 3lvq_E 135 RLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN---GGHLDAKAADGNTA 210 (497)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCS-SSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHH---SCCTTCCCSSSCCH
T ss_pred HHHHHHhccCHHHHHHHHhhcccc-cCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHc---CCCCCccCCCCCcH
Confidence 589999999999999999999886 544 7889999999966 8999999999999 99999999999999
Q ss_pred CC
Q 038825 74 LH 75 (75)
Q Consensus 74 lh 75 (75)
||
T Consensus 211 Lh 212 (497)
T 3lvq_E 211 LH 212 (497)
T ss_dssp HH
T ss_pred HH
Confidence 97
No 110
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.65 E-value=1.2e-15 Score=78.07 Aligned_cols=58 Identities=12% Similarity=0.025 Sum_probs=54.7
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhc
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNL 62 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~ 62 (75)
+||||+|+..|+.+++++|+..++++ +..|..|.||||+|+..++.+++++|++. |+.
T Consensus 206 ~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~---ga~ 263 (278)
T 1dcq_A 206 STALHYCCLTDNAECLKLLLRGKASI-EIANESGETPLDIAKRLKHEHCEELLTQA---LSG 263 (278)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHH---HTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC-CCccCCCCCHHHHHHHcCCHHHHHHHHHc---CCC
Confidence 58999999999999999999999997 88999999999999999999999999998 654
No 111
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.64 E-value=1.5e-15 Score=78.82 Aligned_cols=62 Identities=19% Similarity=0.139 Sum_probs=46.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHhh-CCCccccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhccccC
Q 038825 1 MTALLVATSQGHASLVGTIISH-YPKCYDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDEK 66 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~ 66 (75)
+||||+|+..|+.++++.|+.. +.++ +..|..|+||||+|+..|+.+++++|++. |++++.+
T Consensus 240 ~t~L~~a~~~~~~~~v~~Ll~~~~~~v-n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~---GAd~n~~ 302 (337)
T 4g8k_A 240 KTPLILAVEKKHLGLVQRLLEQEHIEI-NDTDSDGKTALLLAVELKLKKIAELLCKR---GASTDCG 302 (337)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTSTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHTT---SCSSTTC
T ss_pred CCHHHHHHHhhhhHHHHHHHHhcCCcc-cCcCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCCCCC
Confidence 4778888888888888877764 4444 67777888888888888888888888877 7777654
No 112
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.62 E-value=2.1e-17 Score=87.46 Aligned_cols=70 Identities=11% Similarity=0.100 Sum_probs=52.3
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCc--cccccCCCchHHHHHHHhCcHHHHHHHHhchhhhhcccc--CCCCCCCCCC
Q 038825 2 TALLVATSQGHASLVGTIISHYPKC--YDLVDDTGWNVLHFLTVSLYAYELNCLLKDLLFKNLIDE--KDVKGNTPLH 75 (75)
Q Consensus 2 t~lh~a~~~~~~~~~~~ll~~~~~~--~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~--~~~~g~tplh 75 (75)
||||+|+..|+.+++++|++.+++. .+..+.+ +||||+|+..|+.+++++|++. |++++. +|..|.||||
T Consensus 130 tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~---ga~~~~~~~d~~g~TpL~ 203 (376)
T 2aja_A 130 QAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCEL---APTEATAMIQAENYYAFR 203 (376)
T ss_dssp HHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHS---CGGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHc---CCccchhccCCCCCCHHH
Confidence 5888888888888888888888642 0122222 7888888888888888888888 787776 6777777765
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.60 E-value=8.9e-15 Score=65.81 Aligned_cols=52 Identities=17% Similarity=0.127 Sum_probs=48.9
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCccccccCCCchHHHHHHHhCcHHHHHHH
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDLVDDTGWNVLHFLTVSLYAYELNCL 53 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l 53 (75)
+||||+|+..|+.+++++|+..+.++ +..+..|+||||+|+..++.+++++|
T Consensus 58 ~tpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 58 STPLHLAARNGHLEVVKLLLEAGADV-XAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCc-cccccCCCcHHHHHHHcCCHHHHHHh
Confidence 58999999999999999999999887 88899999999999999999999876
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.52 E-value=5e-16 Score=82.28 Aligned_cols=55 Identities=15% Similarity=0.199 Sum_probs=50.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCCcccc--ccCCCchHHHHHH-HhCcHHHHHHHHhc
Q 038825 1 MTALLVATSQGHASLVGTIISHYPKCYDL--VDDTGWNVLHFLT-VSLYAYELNCLLKD 56 (75)
Q Consensus 1 ~t~lh~a~~~~~~~~~~~ll~~~~~~~~~--~~~~~~~~l~~a~-~~~~~~~~~~l~~~ 56 (75)
+||||+|+..|+.+++++|++.++++ .. .+..|+||||+|+ ..|+.+++++|++.
T Consensus 164 ~TpLh~Aa~~G~~eiv~~Ll~~ga~~-~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ 221 (376)
T 2aja_A 164 YHAFRLAAENGHLHVLNRLCELAPTE-ATAMIQAENYYAFRWAAVGRGHHNVINFLLDC 221 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHSCGGG-HHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTS
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCcc-chhccCCCCCCHHHHHHHHCCCHHHHHHHHhC
Confidence 38999999999999999999999886 44 7888999999999 99999999999986
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=70.11 E-value=3.6 Score=14.92 Aligned_cols=16 Identities=19% Similarity=0.158 Sum_probs=10.6
Q ss_pred HHHHHcCCHHHHHHHH
Q 038825 5 LVATSQGHASLVGTII 20 (75)
Q Consensus 5 h~a~~~~~~~~~~~ll 20 (75)
-.||..|+++.++.|-
T Consensus 18 yvA~seGd~etv~~Le 33 (40)
T 1gp8_A 18 DAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHTTSCHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHH
Confidence 4566777777776654
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=37.12 E-value=61 Score=18.70 Aligned_cols=49 Identities=16% Similarity=0.164 Sum_probs=36.7
Q ss_pred HHcCCHHHHHHHHhhCCCc-----------ccc--ccCCCchHHHHHHHhCcHHHHHHHHhc
Q 038825 8 TSQGHASLVGTIISHYPKC-----------YDL--VDDTGWNVLHFLTVSLYAYELNCLLKD 56 (75)
Q Consensus 8 ~~~~~~~~~~~ll~~~~~~-----------~~~--~~~~~~~~l~~a~~~~~~~~~~~l~~~ 56 (75)
+..|+...|+.-+..+.++ ++. .-..|.|-+|.|+.+.+.+++..|+..
T Consensus 30 v~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 30 VVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhc
Confidence 4568888888778777765 111 124488999999999999999988863
No 117
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=35.50 E-value=16 Score=11.48 Aligned_cols=18 Identities=11% Similarity=0.178 Sum_probs=10.6
Q ss_pred HHHHHcCCHHHHHHHHhh
Q 038825 5 LVATSQGHASLVGTIISH 22 (75)
Q Consensus 5 h~a~~~~~~~~~~~ll~~ 22 (75)
.||-++..++.++..++.
T Consensus 6 cyaqrhsspellrrcldn 23 (26)
T 2plx_B 6 CYAQRHSSPELLRRCLDN 23 (26)
T ss_dssp HHHBCCCCHHHHHHHHHH
T ss_pred eehhhcCCHHHHHHHHhc
Confidence 455566667766655543
No 118
>2cmy_B Beta trypsin, veronica hederifolia trypsin inhibitor; acyl-enzyme intermediate, serine protease inhibitor, zymogen protease, digestion; 2.25A {Veronica hederifolia} SCOP: g.2.4.1
Probab=26.92 E-value=28 Score=11.64 Aligned_cols=19 Identities=11% Similarity=0.160 Sum_probs=9.8
Q ss_pred HHHHHcCCHHHHHHHHhhC
Q 038825 5 LVATSQGHASLVGTIISHY 23 (75)
Q Consensus 5 h~a~~~~~~~~~~~ll~~~ 23 (75)
.||.++..++.++..++.+
T Consensus 11 cyaqrhsspellrrcldnc 29 (34)
T 2cmy_B 11 CYAQRHSSPELLRRCLDNC 29 (34)
T ss_dssp HHHBC--CCHHHHHHHHHC
T ss_pred HHHhhcCCHHHHHHHHHhh
Confidence 3555566666666665544
No 119
>3mko_A Glycoprotein C; trimeric coiled-coil, viral protein; 1.80A {Lymphocytic choriomeningitis virus}
Probab=23.30 E-value=17 Score=16.83 Aligned_cols=10 Identities=40% Similarity=0.561 Sum_probs=0.0
Q ss_pred cCCCCCCCCC
Q 038825 65 EKDVKGNTPL 74 (75)
Q Consensus 65 ~~~~~g~tpl 74 (75)
....+|.|||
T Consensus 124 Y~~RQg~TPl 133 (137)
T 3mko_A 124 YIKRQGSTPL 133 (137)
T ss_dssp ----------
T ss_pred HHHhcCCCCc
Confidence 3456777876
Done!