Query 038830
Match_columns 335
No_of_seqs 368 out of 2228
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 03:46:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038830.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038830hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02555 limonoid glucosyltran 100.0 3.3E-70 7.1E-75 539.2 33.0 325 1-332 135-470 (480)
2 PLN02173 UDP-glucosyl transfer 100.0 4.5E-69 9.7E-74 527.2 31.8 323 1-331 123-448 (449)
3 PLN03015 UDP-glucosyl transfer 100.0 3.2E-68 6.9E-73 521.9 31.4 312 1-330 126-467 (470)
4 PLN02410 UDP-glucoronosyl/UDP- 100.0 5.6E-68 1.2E-72 521.0 31.0 312 1-331 124-450 (451)
5 PLN02207 UDP-glycosyltransfera 100.0 3.5E-67 7.6E-72 515.8 32.7 318 1-333 134-467 (468)
6 PLN02152 indole-3-acetate beta 100.0 3.5E-67 7.6E-72 514.6 30.4 317 1-330 125-455 (455)
7 PLN02992 coniferyl-alcohol glu 100.0 7.2E-67 1.6E-71 514.7 30.9 312 1-331 123-469 (481)
8 PLN00164 glucosyltransferase; 100.0 1.6E-66 3.6E-71 514.9 31.8 318 1-333 129-475 (480)
9 PLN02210 UDP-glucosyl transfer 100.0 4.1E-66 8.9E-71 509.1 32.4 328 1-331 122-455 (456)
10 PLN02534 UDP-glycosyltransfera 100.0 1.2E-65 2.5E-70 507.7 31.4 326 1-335 138-490 (491)
11 PLN03004 UDP-glycosyltransfera 100.0 4.7E-66 1E-70 506.1 27.3 303 1-320 131-450 (451)
12 PLN02863 UDP-glucoronosyl/UDP- 100.0 1.7E-65 3.7E-70 506.6 31.1 325 1-332 133-472 (477)
13 PLN02167 UDP-glycosyltransfera 100.0 3.5E-65 7.7E-70 505.7 30.8 317 1-333 137-474 (475)
14 PLN02554 UDP-glycosyltransfera 100.0 1.4E-64 3E-69 502.2 30.1 317 1-334 131-481 (481)
15 PLN02562 UDP-glycosyltransfera 100.0 3.5E-64 7.5E-69 494.7 31.5 312 1-330 122-448 (448)
16 PLN02764 glycosyltransferase f 100.0 2.9E-64 6.3E-69 492.4 29.6 305 1-332 126-446 (453)
17 PLN02208 glycosyltransferase f 100.0 1.1E-62 2.3E-67 482.5 29.5 301 1-332 125-440 (442)
18 PLN00414 glycosyltransferase f 100.0 4.2E-62 9E-67 478.8 28.4 301 1-332 125-441 (446)
19 PLN03007 UDP-glucosyltransfera 100.0 2.3E-61 4.9E-66 479.5 32.4 322 1-332 141-481 (482)
20 PLN02670 transferase, transfer 100.0 1.6E-61 3.5E-66 476.2 29.7 317 1-332 129-466 (472)
21 PLN02448 UDP-glycosyltransfera 100.0 1E-60 2.2E-65 472.4 31.8 318 1-332 127-458 (459)
22 KOG1192 UDP-glucuronosyl and U 100.0 7.1E-39 1.5E-43 319.6 10.2 283 3-309 136-437 (496)
23 PF00201 UDPGT: UDP-glucoronos 100.0 2.1E-38 4.5E-43 316.9 8.5 168 131-313 260-428 (500)
24 PHA03392 egt ecdysteroid UDP-g 100.0 5.3E-35 1.1E-39 291.8 21.0 201 76-310 244-448 (507)
25 TIGR01426 MGT glycosyltransfer 99.9 2.3E-25 4.9E-30 216.3 19.1 158 140-310 218-375 (392)
26 COG1819 Glycosyl transferases, 99.9 1E-24 2.3E-29 212.4 17.6 173 135-330 227-399 (406)
27 cd03784 GT1_Gtf_like This fami 99.9 6.9E-24 1.5E-28 206.1 16.3 158 134-309 228-386 (401)
28 PRK12446 undecaprenyldiphospho 99.6 2.5E-15 5.4E-20 144.2 12.2 148 142-303 180-335 (352)
29 COG0707 MurG UDP-N-acetylgluco 99.5 3.6E-14 7.9E-19 135.8 12.4 148 146-304 182-338 (357)
30 PF04101 Glyco_tran_28_C: Glyc 99.5 4.7E-16 1E-20 133.4 -0.8 137 149-292 1-145 (167)
31 PF13528 Glyco_trans_1_3: Glyc 99.4 1.8E-12 3.8E-17 122.1 10.7 122 146-288 191-317 (318)
32 TIGR00661 MJ1255 conserved hyp 99.4 4.2E-12 9E-17 120.3 10.9 125 146-292 187-315 (321)
33 PRK00726 murG undecaprenyldiph 99.2 7.5E-11 1.6E-15 112.9 13.2 136 146-292 182-325 (357)
34 cd03785 GT1_MurG MurG is an N- 99.2 4.7E-11 1E-15 113.5 11.0 144 142-292 176-325 (350)
35 PRK13608 diacylglycerol glucos 99.2 9.2E-10 2E-14 107.2 15.7 145 145-303 200-351 (391)
36 PRK13609 diacylglycerol glucos 99.1 3E-09 6.5E-14 102.8 14.7 134 145-292 200-339 (380)
37 PLN02605 monogalactosyldiacylg 99.0 6.7E-09 1.5E-13 100.7 16.2 143 137-291 196-347 (382)
38 TIGR01133 murG undecaprenyldip 99.0 2E-09 4.3E-14 102.2 9.9 137 146-292 178-322 (348)
39 TIGR00215 lpxB lipid-A-disacch 98.8 2.2E-08 4.8E-13 97.4 10.5 174 141-325 185-382 (385)
40 TIGR03492 conserved hypothetic 98.8 8.1E-08 1.8E-12 93.8 12.5 139 145-292 203-365 (396)
41 TIGR03590 PseG pseudaminic aci 98.7 4.4E-08 9.5E-13 91.2 7.9 103 148-257 171-278 (279)
42 PRK00025 lpxB lipid-A-disaccha 98.6 3.5E-07 7.6E-12 88.2 10.8 172 139-327 178-373 (380)
43 cd03814 GT1_like_2 This family 98.4 1.4E-05 3.1E-10 74.8 15.4 128 148-292 197-333 (364)
44 cd03823 GT1_ExpE7_like This fa 98.1 8.1E-05 1.8E-09 69.5 14.8 133 146-292 189-330 (359)
45 COG4671 Predicted glycosyl tra 98.0 2.7E-05 5.8E-10 73.2 9.6 137 145-290 217-364 (400)
46 cd03795 GT1_like_4 This family 98.0 4.2E-05 9.2E-10 72.0 10.9 145 148-304 191-346 (357)
47 cd03794 GT1_wbuB_like This fam 98.0 6.1E-05 1.3E-09 70.6 11.9 147 146-303 218-378 (394)
48 cd03817 GT1_UGDG_like This fam 98.0 7.6E-05 1.7E-09 69.8 12.3 146 147-306 201-359 (374)
49 PRK15427 colanic acid biosynth 98.0 0.00016 3.5E-09 70.8 14.4 133 148-292 222-372 (406)
50 KOG3349 Predicted glycosyltran 98.0 4.7E-05 1E-09 63.2 8.3 111 148-261 4-126 (170)
51 PF00534 Glycos_transf_1: Glyc 97.9 5.7E-05 1.2E-09 64.2 9.2 147 145-303 12-171 (172)
52 cd03808 GT1_cap1E_like This fa 97.9 0.00033 7.2E-09 64.8 15.0 135 146-292 186-330 (359)
53 cd05844 GT1_like_7 Glycosyltra 97.9 0.00011 2.5E-09 69.7 11.9 81 200-292 244-337 (367)
54 cd03801 GT1_YqgM_like This fam 97.9 0.00021 4.5E-09 66.1 13.2 82 199-292 254-342 (374)
55 PF13844 Glyco_transf_41: Glyc 97.9 0.00022 4.8E-09 70.5 13.7 137 145-292 282-431 (468)
56 cd03800 GT1_Sucrose_synthase T 97.9 0.0017 3.7E-08 62.2 19.7 132 148-292 220-369 (398)
57 cd04946 GT1_AmsK_like This fam 97.9 0.00032 6.9E-09 68.7 14.8 162 148-326 230-406 (407)
58 cd03799 GT1_amsK_like This is 97.9 0.00014 3.1E-09 68.3 11.5 143 147-302 178-339 (355)
59 cd03825 GT1_wcfI_like This fam 97.8 0.001 2.2E-08 62.8 16.8 81 200-292 243-331 (365)
60 cd03798 GT1_wlbH_like This fam 97.8 0.00062 1.3E-08 63.2 14.2 134 147-292 201-345 (377)
61 cd03807 GT1_WbnK_like This fam 97.8 0.001 2.2E-08 61.8 15.6 131 147-292 192-333 (365)
62 PRK09922 UDP-D-galactose:(gluc 97.8 0.00034 7.5E-09 67.0 12.6 160 148-330 180-357 (359)
63 cd03820 GT1_amsD_like This fam 97.8 0.00029 6.3E-09 64.9 11.7 141 148-302 178-331 (348)
64 cd03786 GT1_UDP-GlcNAc_2-Epime 97.8 0.00012 2.7E-09 69.8 9.3 132 146-292 197-338 (363)
65 cd04962 GT1_like_5 This family 97.7 0.00079 1.7E-08 64.0 14.5 144 148-304 197-350 (371)
66 cd03804 GT1_wbaZ_like This fam 97.7 0.0001 2.2E-09 70.1 8.1 136 151-302 198-339 (351)
67 TIGR00236 wecB UDP-N-acetylglu 97.7 0.00029 6.2E-09 67.7 11.0 155 147-325 197-361 (365)
68 PRK10307 putative glycosyl tra 97.7 0.0008 1.7E-08 65.6 14.2 114 201-331 284-407 (412)
69 TIGR03088 stp2 sugar transfera 97.7 0.00066 1.4E-08 65.0 13.3 80 201-292 255-339 (374)
70 PRK15484 lipopolysaccharide 1, 97.7 0.0023 4.9E-08 62.1 17.0 84 199-293 255-346 (380)
71 cd03822 GT1_ecORF704_like This 97.7 0.0016 3.5E-08 61.0 15.5 93 200-303 246-347 (366)
72 PRK05749 3-deoxy-D-manno-octul 97.7 0.00098 2.1E-08 65.4 14.2 91 204-304 305-402 (425)
73 PRK14089 ipid-A-disaccharide s 97.7 0.00026 5.6E-09 67.9 9.8 146 147-308 167-332 (347)
74 cd03821 GT1_Bme6_like This fam 97.7 0.0013 2.8E-08 61.4 14.4 91 200-304 261-359 (375)
75 TIGR02149 glgA_Coryne glycogen 97.7 0.00052 1.1E-08 65.9 11.9 147 148-303 201-365 (388)
76 cd04949 GT1_gtfA_like This fam 97.6 0.0023 5E-08 61.2 15.5 97 201-306 261-361 (372)
77 PLN02871 UDP-sulfoquinovose:DA 97.6 0.00083 1.8E-08 66.9 12.7 137 149-303 264-413 (465)
78 cd03819 GT1_WavL_like This fam 97.6 0.0016 3.5E-08 61.2 13.9 150 146-305 183-346 (355)
79 cd04951 GT1_WbdM_like This fam 97.5 0.0016 3.4E-08 61.3 12.3 132 147-292 187-327 (360)
80 cd03816 GT1_ALG1_like This fam 97.5 0.0012 2.7E-08 64.7 11.8 90 202-305 295-399 (415)
81 PF13692 Glyco_trans_1_4: Glyc 97.5 0.0003 6.6E-09 57.2 6.3 127 149-291 3-135 (135)
82 TIGR03449 mycothiol_MshA UDP-N 97.5 0.0015 3.2E-08 63.4 12.2 91 201-303 283-381 (405)
83 TIGR03087 stp1 sugar transfera 97.4 0.004 8.6E-08 60.5 14.5 89 201-303 280-375 (397)
84 cd03818 GT1_ExpC_like This fam 97.4 0.0027 5.9E-08 61.6 13.1 82 201-292 281-367 (396)
85 cd03811 GT1_WabH_like This fam 97.3 0.0024 5.3E-08 58.7 11.2 134 146-292 187-333 (353)
86 cd03809 GT1_mtfB_like This fam 97.3 0.0018 3.8E-08 60.7 10.0 132 149-292 196-337 (365)
87 cd03805 GT1_ALG2_like This fam 97.3 0.0068 1.5E-07 58.2 14.0 143 146-303 209-377 (392)
88 COG3914 Spy Predicted O-linked 97.1 0.0051 1.1E-07 61.5 11.2 132 145-285 427-572 (620)
89 TIGR02918 accessory Sec system 97.1 0.0066 1.4E-07 61.2 12.2 101 201-307 376-483 (500)
90 cd03813 GT1_like_3 This family 97.1 0.013 2.9E-07 58.5 14.3 134 148-292 293-443 (475)
91 COG3980 spsG Spore coat polysa 97.1 0.0054 1.2E-07 56.4 10.2 132 149-292 160-294 (318)
92 TIGR02472 sucr_P_syn_N sucrose 97.0 0.013 2.9E-07 57.8 13.8 81 200-292 316-407 (439)
93 PRK09814 beta-1,6-galactofuran 97.0 0.0082 1.8E-07 57.1 11.3 97 200-310 206-318 (333)
94 cd04955 GT1_like_6 This family 97.0 0.014 3E-07 55.0 12.8 123 151-292 196-331 (363)
95 cd03812 GT1_CapH_like This fam 96.9 0.0094 2E-07 56.1 10.9 134 147-293 191-333 (358)
96 cd03796 GT1_PIG-A_like This fa 96.9 0.022 4.8E-07 55.3 13.6 131 146-292 191-334 (398)
97 cd03802 GT1_AviGT4_like This f 96.8 0.01 2.2E-07 55.3 10.4 129 149-291 172-308 (335)
98 COG5017 Uncharacterized conser 96.8 0.0088 1.9E-07 49.1 8.0 100 150-261 2-115 (161)
99 cd03792 GT1_Trehalose_phosphor 96.7 0.044 9.5E-07 52.6 14.4 89 201-303 252-350 (372)
100 PF02684 LpxB: Lipid-A-disacch 96.7 0.022 4.9E-07 55.1 12.2 171 145-321 182-367 (373)
101 COG1519 KdtA 3-deoxy-D-manno-o 96.7 0.074 1.6E-06 51.7 15.5 150 150-309 233-405 (419)
102 PRK15179 Vi polysaccharide bio 96.7 0.03 6.6E-07 58.6 13.5 94 200-303 573-672 (694)
103 PF02350 Epimerase_2: UDP-N-ac 96.7 0.003 6.5E-08 60.7 5.8 130 145-291 178-318 (346)
104 KOG4626 O-linked N-acetylgluco 96.6 0.018 3.9E-07 58.1 10.9 138 145-292 756-905 (966)
105 PRK10017 colanic acid biosynth 96.5 0.07 1.5E-06 52.7 14.0 173 138-330 225-423 (426)
106 PRK15490 Vi polysaccharide bio 96.4 0.043 9.4E-07 55.7 12.3 113 200-330 454-574 (578)
107 PRK14098 glycogen synthase; Pr 96.0 0.09 2E-06 52.9 12.4 129 149-289 308-449 (489)
108 cd04950 GT1_like_1 Glycosyltra 95.9 0.26 5.7E-06 47.5 14.7 125 149-292 206-341 (373)
109 PHA01633 putative glycosyl tra 95.9 0.21 4.5E-06 47.8 13.6 86 199-292 199-308 (335)
110 PLN02275 transferase, transfer 95.8 0.06 1.3E-06 51.9 9.8 74 202-289 287-371 (371)
111 cd03791 GT1_Glycogen_synthase_ 95.7 0.15 3.3E-06 50.6 12.4 132 148-290 296-441 (476)
112 TIGR02095 glgA glycogen/starch 95.5 0.15 3.2E-06 50.9 11.4 133 148-290 291-436 (473)
113 PF04007 DUF354: Protein of un 95.3 0.32 7E-06 46.5 12.6 140 130-289 164-308 (335)
114 PF13524 Glyco_trans_1_2: Glyc 95.3 0.1 2.2E-06 39.5 7.6 55 226-292 9-63 (92)
115 PRK00654 glgA glycogen synthas 95.0 0.4 8.7E-06 47.8 12.9 133 148-290 282-427 (466)
116 PHA01630 putative group 1 glyc 94.7 0.81 1.8E-05 43.6 13.4 39 208-248 197-242 (331)
117 PF06722 DUF1205: Protein of u 94.6 0.058 1.3E-06 42.0 4.4 54 135-188 28-86 (97)
118 TIGR02468 sucrsPsyn_pln sucros 94.5 0.24 5.2E-06 53.8 10.3 93 201-303 548-650 (1050)
119 cd03806 GT1_ALG11_like This fa 94.5 0.7 1.5E-05 45.4 12.8 79 200-292 304-393 (419)
120 TIGR03568 NeuC_NnaA UDP-N-acet 94.4 0.44 9.5E-06 46.1 11.1 128 146-290 200-338 (365)
121 PLN02949 transferase, transfer 94.3 1 2.2E-05 45.1 13.6 92 200-303 334-436 (463)
122 COG0763 LpxB Lipid A disacchar 93.8 0.45 9.7E-06 45.9 9.5 186 134-329 175-379 (381)
123 PLN02316 synthase/transferase 93.5 1.9 4.2E-05 47.1 14.7 114 201-327 900-1029(1036)
124 PRK01021 lpxB lipid-A-disaccha 93.2 1.7 3.7E-05 44.6 13.0 224 77-308 310-589 (608)
125 PLN02846 digalactosyldiacylgly 92.9 1 2.2E-05 45.1 10.8 71 207-292 290-364 (462)
126 TIGR03713 acc_sec_asp1 accesso 92.7 0.68 1.5E-05 47.0 9.5 90 201-307 409-505 (519)
127 PRK10125 putative glycosyl tra 92.6 3.1 6.6E-05 40.8 13.7 100 164-285 257-365 (405)
128 cd01635 Glycosyltransferase_GT 91.6 0.5 1.1E-05 40.6 6.3 49 200-250 160-216 (229)
129 PLN02939 transferase, transfer 90.4 4.6 0.0001 43.8 13.0 82 201-290 837-930 (977)
130 PLN02501 digalactosyldiacylgly 88.3 2.8 6.2E-05 43.9 9.3 75 203-292 603-682 (794)
131 TIGR02193 heptsyl_trn_I lipopo 87.8 1.8 3.9E-05 40.6 7.2 143 138-289 170-319 (319)
132 TIGR02400 trehalose_OtsA alpha 87.0 4.9 0.00011 40.1 10.0 102 208-330 343-455 (456)
133 cd03788 GT1_TPS Trehalose-6-Ph 86.8 3.4 7.5E-05 41.2 8.9 102 207-329 347-459 (460)
134 COG0438 RfaG Glycosyltransfera 86.5 23 0.0005 31.5 13.7 130 149-292 200-343 (381)
135 TIGR02919 accessory Sec system 86.4 6.1 0.00013 39.3 10.2 128 162-308 291-426 (438)
136 PLN00142 sucrose synthase 86.3 3.8 8.3E-05 43.7 9.2 50 230-289 681-730 (815)
137 TIGR02470 sucr_synth sucrose s 85.8 4.3 9.2E-05 43.3 9.2 79 201-289 619-707 (784)
138 PF04464 Glyphos_transf: CDP-G 83.0 4.5 9.8E-05 38.7 7.5 146 165-325 219-367 (369)
139 PRK14099 glycogen synthase; Pr 81.0 21 0.00047 35.8 11.8 133 150-292 297-448 (485)
140 PLN03063 alpha,alpha-trehalose 79.5 5.8 0.00012 42.6 7.4 81 213-308 371-459 (797)
141 COG0381 WecB UDP-N-acetylgluco 79.1 15 0.00033 35.7 9.3 136 146-301 203-348 (383)
142 cd03789 GT1_LPS_heptosyltransf 78.8 4.7 0.0001 37.0 5.8 95 147-245 121-223 (279)
143 cd03793 GT1_Glycogen_synthase_ 76.0 7.5 0.00016 39.9 6.7 81 211-292 468-553 (590)
144 PRK14501 putative bifunctional 75.3 29 0.00063 36.8 11.2 108 207-331 348-462 (726)
145 PF06258 Mito_fiss_Elm1: Mitoc 73.8 33 0.00071 32.4 10.1 50 210-260 221-270 (311)
146 TIGR02201 heptsyl_trn_III lipo 73.3 12 0.00027 35.3 7.3 104 138-245 171-285 (344)
147 PRK12446 undecaprenyldiphospho 72.9 15 0.00032 35.3 7.6 94 148-245 3-120 (352)
148 PF05159 Capsule_synth: Capsul 70.8 12 0.00025 34.3 6.2 81 163-246 140-225 (269)
149 TIGR02398 gluc_glyc_Psyn gluco 70.6 1.3E+02 0.0027 30.5 16.0 109 205-334 366-485 (487)
150 PRK10422 lipopolysaccharide co 68.0 21 0.00045 34.0 7.5 97 146-245 182-287 (352)
151 TIGR02195 heptsyl_trn_II lipop 65.7 23 0.0005 33.3 7.3 96 146-245 173-276 (334)
152 PF01075 Glyco_transf_9: Glyco 63.2 8.6 0.00019 34.4 3.7 98 145-245 103-208 (247)
153 COG4370 Uncharacterized protei 61.2 40 0.00086 32.0 7.5 83 201-292 294-380 (412)
154 PRK10964 ADP-heptose:LPS hepto 60.5 15 0.00033 34.5 4.9 135 147-290 178-321 (322)
155 PRK10916 ADP-heptose:LPS hepto 59.5 34 0.00073 32.5 7.2 96 146-245 179-286 (348)
156 COG0859 RfaF ADP-heptose:LPS h 57.0 40 0.00087 32.0 7.2 95 147-245 175-276 (334)
157 PF00731 AIRC: AIR carboxylase 52.5 59 0.0013 27.3 6.6 138 150-311 3-149 (150)
158 cd07039 TPP_PYR_POX Pyrimidine 52.4 1.2E+02 0.0026 25.6 8.7 27 220-246 64-96 (164)
159 PLN02470 acetolactate synthase 51.4 19 0.00042 37.0 4.3 92 153-246 2-109 (585)
160 PRK06718 precorrin-2 dehydroge 50.1 46 0.001 29.2 6.0 147 146-312 10-166 (202)
161 PF08030 NAD_binding_6: Ferric 49.8 13 0.00029 30.6 2.4 39 148-186 3-46 (156)
162 PF02826 2-Hacid_dh_C: D-isome 49.8 13 0.00028 31.9 2.4 105 146-287 36-143 (178)
163 cd01840 SGNH_hydrolase_yrhL_li 48.9 65 0.0014 26.4 6.4 38 146-184 50-87 (150)
164 COG0297 GlgA Glycogen synthase 48.8 3E+02 0.0066 27.8 12.7 164 148-327 293-473 (487)
165 cd07035 TPP_PYR_POX_like Pyrim 48.2 1E+02 0.0022 25.2 7.6 28 220-247 60-93 (155)
166 TIGR01470 cysG_Nterm siroheme 43.9 1.2E+02 0.0026 26.7 7.7 149 146-311 9-165 (205)
167 KOG0853 Glycosyltransferase [C 43.9 12 0.00027 37.6 1.4 59 231-300 381-439 (495)
168 KOG2941 Beta-1,4-mannosyltrans 43.4 3.2E+02 0.007 26.6 12.1 144 145-304 252-423 (444)
169 cd07038 TPP_PYR_PDC_IPDC_like 43.2 39 0.00085 28.5 4.3 27 220-246 60-92 (162)
170 PF07429 Glyco_transf_56: 4-al 42.9 3E+02 0.0064 26.7 10.4 134 148-290 184-332 (360)
171 PF06506 PrpR_N: Propionate ca 42.7 19 0.00042 30.7 2.4 69 217-290 32-123 (176)
172 TIGR03609 S_layer_CsaB polysac 41.7 77 0.0017 29.2 6.4 109 147-261 172-288 (298)
173 COG3195 Uncharacterized protei 41.6 1.1E+02 0.0024 26.2 6.5 96 210-309 64-164 (176)
174 PRK04885 ppnK inorganic polyph 39.6 57 0.0012 30.1 5.1 54 217-292 35-94 (265)
175 PRK02797 4-alpha-L-fucosyltran 38.4 3.6E+02 0.0078 25.7 10.1 131 150-289 147-292 (322)
176 COG0801 FolK 7,8-dihydro-6-hyd 36.9 70 0.0015 27.2 4.8 29 149-177 3-31 (160)
177 cd03412 CbiK_N Anaerobic cobal 35.5 68 0.0015 25.9 4.4 37 148-184 2-40 (127)
178 PRK14077 pnk inorganic polypho 34.5 77 0.0017 29.6 5.1 56 215-292 62-121 (287)
179 PF06785 UPF0242: Uncharacteri 33.3 18 0.00039 34.3 0.7 76 229-304 15-97 (401)
180 COG3660 Predicted nucleoside-d 33.0 2.2E+02 0.0047 26.6 7.5 96 148-245 163-271 (329)
181 PRK02155 ppnK NAD(+)/NADH kina 32.9 78 0.0017 29.6 4.9 55 216-292 62-120 (291)
182 PRK15409 bifunctional glyoxyla 32.8 1.2E+02 0.0025 28.9 6.1 105 146-286 145-251 (323)
183 PRK00923 sirohydrochlorin coba 32.7 2.1E+02 0.0045 22.7 6.8 27 148-174 3-29 (126)
184 cd03416 CbiX_SirB_N Sirohydroc 32.0 98 0.0021 23.4 4.6 27 149-175 2-28 (101)
185 PRK08410 2-hydroxyacid dehydro 31.9 1.5E+02 0.0033 27.9 6.7 101 146-287 145-248 (311)
186 PRK08155 acetolactate synthase 30.7 75 0.0016 32.5 4.8 27 220-246 77-109 (564)
187 PF06180 CbiK: Cobalt chelatas 30.7 72 0.0016 29.4 4.2 38 148-185 2-42 (262)
188 PRK06932 glycerate dehydrogena 30.5 1.3E+02 0.0029 28.3 6.1 101 146-286 147-248 (314)
189 PRK06270 homoserine dehydrogen 29.7 2.7E+02 0.0058 26.5 8.1 39 211-249 81-131 (341)
190 TIGR00661 MJ1255 conserved hyp 29.7 1E+02 0.0023 28.7 5.3 27 217-245 93-119 (321)
191 PRK15469 ghrA bifunctional gly 29.5 3.3E+02 0.0071 25.7 8.6 105 146-286 136-241 (312)
192 PRK07574 formate dehydrogenase 29.3 1.9E+02 0.0041 28.3 7.0 72 147-235 193-264 (385)
193 COG1154 Dxs Deoxyxylulose-5-ph 29.0 3.9E+02 0.0085 27.8 9.3 117 139-290 494-623 (627)
194 PRK01911 ppnK inorganic polyph 29.0 1.1E+02 0.0025 28.6 5.3 55 216-292 63-121 (292)
195 KOG0069 Glyoxylate/hydroxypyru 28.3 1.8E+02 0.0038 27.9 6.4 105 145-286 161-268 (336)
196 PF13499 EF-hand_7: EF-hand do 28.2 52 0.0011 22.6 2.3 56 269-328 10-65 (66)
197 PF04558 tRNA_synt_1c_R1: Glut 28.1 58 0.0013 27.8 2.9 28 257-292 106-133 (164)
198 COG2230 Cfa Cyclopropane fatty 28.0 42 0.0009 31.4 2.1 38 227-265 81-121 (283)
199 PRK14075 pnk inorganic polypho 27.9 96 0.0021 28.4 4.5 54 217-292 41-95 (256)
200 PRK02649 ppnK inorganic polyph 27.8 1.1E+02 0.0023 28.9 4.9 55 216-292 67-125 (305)
201 PF12363 DUF3647: Phage protei 27.7 2.6E+02 0.0057 22.1 6.5 37 253-292 48-84 (113)
202 PF05225 HTH_psq: helix-turn-h 27.7 1.1E+02 0.0025 19.8 3.6 26 277-304 1-26 (45)
203 TIGR00173 menD 2-succinyl-5-en 27.5 2E+02 0.0044 28.2 7.1 26 220-245 64-95 (432)
204 PRK06487 glycerate dehydrogena 27.2 1.7E+02 0.0036 27.7 6.1 100 146-286 148-248 (317)
205 cd07025 Peptidase_S66 LD-Carbo 27.1 97 0.0021 28.7 4.5 75 159-248 45-121 (282)
206 PRK08322 acetolactate synthase 26.2 1.1E+02 0.0023 31.2 5.0 27 220-246 64-96 (547)
207 PF10933 DUF2827: Protein of u 26.1 2.7E+02 0.006 26.9 7.3 101 204-329 256-363 (364)
208 PRK13840 sucrose phosphorylase 25.6 4.1E+02 0.0089 27.0 8.8 126 134-286 269-415 (495)
209 PF10093 DUF2331: Uncharacteri 25.3 1.6E+02 0.0035 28.7 5.7 82 159-244 191-287 (374)
210 PRK03372 ppnK inorganic polyph 25.3 1.2E+02 0.0027 28.6 4.8 55 216-292 71-129 (306)
211 PRK03378 ppnK inorganic polyph 25.2 1.3E+02 0.0028 28.2 4.9 55 216-292 62-120 (292)
212 PF05693 Glycogen_syn: Glycoge 25.1 62 0.0014 33.5 2.9 96 210-308 462-566 (633)
213 cd03409 Chelatase_Class_II Cla 24.9 2E+02 0.0043 21.4 5.3 26 149-174 2-28 (101)
214 PF10083 DUF2321: Uncharacteri 24.7 1.9E+02 0.004 24.5 5.1 56 245-311 78-134 (158)
215 PRK11380 hypothetical protein; 24.6 2.8E+02 0.006 26.7 6.9 68 211-293 117-196 (353)
216 PRK15424 propionate catabolism 24.6 1.2E+02 0.0027 31.0 5.0 29 217-248 64-92 (538)
217 PLN02929 NADH kinase 24.4 93 0.002 29.4 3.8 97 162-292 33-138 (301)
218 PRK15438 erythronate-4-phospha 24.3 2.8E+02 0.006 27.1 7.2 61 146-228 116-176 (378)
219 PRK08199 thiamine pyrophosphat 24.1 2E+02 0.0043 29.3 6.5 26 220-245 72-103 (557)
220 PRK07525 sulfoacetaldehyde ace 23.7 3.2E+02 0.0069 28.1 7.9 28 219-246 68-101 (588)
221 PRK06276 acetolactate synthase 23.3 1.3E+02 0.0029 30.9 5.1 27 220-246 64-96 (586)
222 PRK04539 ppnK inorganic polyph 23.3 1.3E+02 0.0028 28.3 4.5 55 216-292 67-125 (296)
223 cd03818 GT1_ExpC_like This fam 23.2 2.9E+02 0.0062 26.4 7.2 25 162-186 10-34 (396)
224 PF08006 DUF1700: Protein of u 22.9 3.1E+02 0.0067 23.3 6.6 39 277-315 2-40 (181)
225 PLN02928 oxidoreductase family 22.2 2.5E+02 0.0053 26.9 6.3 113 146-286 159-277 (347)
226 KOG2635 Medium subunit of clat 22.1 1.1E+02 0.0025 30.2 3.9 25 294-318 156-180 (512)
227 PLN03139 formate dehydrogenase 22.1 3.2E+02 0.007 26.7 7.2 70 146-233 199-269 (386)
228 PF02776 TPP_enzyme_N: Thiamin 21.9 70 0.0015 27.0 2.3 27 221-247 66-98 (172)
229 TIGR03164 UHCUDC OHCU decarbox 21.7 3.9E+02 0.0085 22.5 6.8 92 214-309 56-151 (157)
230 COG3340 PepE Peptidase E [Amin 21.5 4.4E+02 0.0095 23.7 7.1 37 146-182 32-68 (224)
231 PF06204 CBM_X: Putative carbo 21.3 43 0.00092 24.0 0.7 23 208-230 24-46 (66)
232 PLN02859 glutamine-tRNA ligase 21.0 1.7E+02 0.0037 31.4 5.2 49 254-311 106-158 (788)
233 PRK12595 bifunctional 3-deoxy- 20.9 7.6E+02 0.016 23.8 10.4 127 150-289 120-249 (360)
234 COG2159 Predicted metal-depend 20.9 4E+02 0.0087 24.8 7.4 93 135-235 116-210 (293)
235 PRK01185 ppnK inorganic polyph 20.9 1.9E+02 0.0041 26.8 5.1 54 217-292 52-106 (271)
236 PRK08527 acetolactate synthase 20.5 1.2E+02 0.0027 30.9 4.1 27 220-246 67-99 (563)
237 COG1609 PurR Transcriptional r 20.4 5.2E+02 0.011 24.3 8.1 49 136-184 165-215 (333)
238 PRK13798 putative OHCU decarbo 20.3 4.2E+02 0.0091 22.6 6.7 88 213-309 67-156 (166)
No 1
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=3.3e-70 Score=539.23 Aligned_cols=325 Identities=40% Similarity=0.747 Sum_probs=278.2
Q ss_pred CcCcceeEechhhHHHHHHHHHhhcCCCCCCC---CCCceecCCCCCCCCCCCCccccCCCCchhHHHHHHHHHhccccc
Q 038830 1 KFGLIGAAFLTQSCAVAGIYHHMNKGLIKLPL---TGDQVLVPGLRPLDPQDTPSFINDSASYPAFFDMIITRQFSNIDK 77 (335)
Q Consensus 1 ~~gip~~~f~~~~a~~~~~~~~~~~~~~~~~~---~~~~~~~pg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (335)
++|||+++|||++|++++++++++++.++... .+..+.+||+|+++.+|||+++...+.++.+++.++ +.++...+
T Consensus 135 ~~gIP~~~F~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~-~~~~~~~~ 213 (480)
T PLN02555 135 ELGIPSAVLWVQSCACFSAYYHYYHGLVPFPTETEPEIDVQLPCMPLLKYDEIPSFLHPSSPYPFLRRAIL-GQYKNLDK 213 (480)
T ss_pred HcCCCeEEeecccHHHHHHHHHHhhcCCCcccccCCCceeecCCCCCcCHhhCcccccCCCCchHHHHHHH-HHHHhccc
Confidence 58999999999999999999999776544322 123567999999999999998754333445566677 77778889
Q ss_pred ccEEEEcChHHhhHHHHHHHhccCCcceeccCCCCcccccccccccccCccCCCCChhhHHHHhhcCCCCcEEEEEeCCc
Q 038830 78 ADWILCNTFYELEKEVTEWLGKHWLLRTIGPTLPSIYLDKQIEDDKEYGFSIFEPDIESSMKWLNDRANGSVVYVSFGSM 157 (335)
Q Consensus 78 ~~~vl~nsf~elE~~~~~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~ 157 (335)
++++|+|||+|||+++++++++..|+|+|||+++... .. +...+.+.++. +++|.+|||+++++|||||||||+
T Consensus 214 a~~vlvNTf~eLE~~~~~~l~~~~~v~~iGPl~~~~~---~~--~~~~~~~~~~~-~~~~~~wLd~~~~~sVvyvsfGS~ 287 (480)
T PLN02555 214 PFCILIDTFQELEKEIIDYMSKLCPIKPVGPLFKMAK---TP--NSDVKGDISKP-ADDCIEWLDSKPPSSVVYISFGTV 287 (480)
T ss_pred CCEEEEEchHHHhHHHHHHHhhCCCEEEeCcccCccc---cc--ccccccccccc-chhHHHHHhCCCCCceeEEEeccc
Confidence 9999999999999999999987668999999976421 00 00111222333 568999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhhCCCcEEEEEeCCC------CCcCCccchhhcCCceEEEeecchhhhccccCcCeEEccCCcch
Q 038830 158 ATLKIEEMEELPCGLKASDKYFLWVVRESE------QSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNS 231 (335)
Q Consensus 158 ~~~~~~~~~~l~~~l~~~~~~flw~~~~~~------~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~v~~fItHgG~nS 231 (335)
..++.+|+.+++.+|+.++++|||+++... ...+|+++.+++++|+++++|+||.+||+|+++++|||||||||
T Consensus 288 ~~~~~~q~~ela~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS 367 (480)
T PLN02555 288 VYLKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPHVLPEEFLEKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNS 367 (480)
T ss_pred cCCCHHHHHHHHHHHHhcCCeEEEEEecCcccccchhhcCChhhhhhcCCceEEEecCCHHHHhCCCccCeEEecCCcch
Confidence 999999999999999999999999998421 13578899999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCC--CCCCcCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Q 038830 232 TLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPAD--EKGIVRREAIAHCISEILEGKRDKEIKQNADKWRNFAK 309 (335)
Q Consensus 232 v~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~--~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~ 309 (335)
++||+++|||||+||+++||+.||+++++.||+|+++... ..+.+++++|.++|+++|.+++|+++|+||++|+++++
T Consensus 368 ~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~ 447 (480)
T PLN02555 368 TMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAE 447 (480)
T ss_pred HHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCccccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999531 12368999999999999988889999999999999999
Q ss_pred HHHhcCChHHHHHHHHHHHHhhc
Q 038830 310 EAVAKGGSSDKNIDDFVANLISS 332 (335)
Q Consensus 310 ~a~~~ggss~~~l~~~v~~~~~~ 332 (335)
+|+.+||||++|+++||++++++
T Consensus 448 ~A~~egGSS~~~l~~~v~~i~~~ 470 (480)
T PLN02555 448 AAVAEGGSSDRNFQEFVDKLVRK 470 (480)
T ss_pred HHhcCCCcHHHHHHHHHHHHHhc
Confidence 99999999999999999999875
No 2
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=4.5e-69 Score=527.22 Aligned_cols=323 Identities=48% Similarity=0.874 Sum_probs=269.5
Q ss_pred CcCcceeEechhhHHHHHHHHHhhcCCCCCCCCCCceecCCCCCCCCCCCCccccCCCCchhHHHHHHHHHhcccccccE
Q 038830 1 KFGLIGAAFLTQSCAVAGIYHHMNKGLIKLPLTGDQVLVPGLRPLDPQDTPSFINDSASYPAFFDMIITRQFSNIDKADW 80 (335)
Q Consensus 1 ~~gip~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (335)
++|||+++|||++|++++++++... ..++..+.+||+|+++.+|||.++.+.+..+...+.++ +.++...++++
T Consensus 123 elgIP~v~F~~~~a~~~~~~~~~~~-----~~~~~~~~~pg~p~l~~~dlp~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 196 (449)
T PLN02173 123 EFGLAAAPFFTQSCAVNYINYLSYI-----NNGSLTLPIKDLPLLELQDLPTFVTPTGSHLAYFEMVL-QQFTNFDKADF 196 (449)
T ss_pred HhCCCEEEEechHHHHHHHHHhHHh-----ccCCccCCCCCCCCCChhhCChhhcCCCCchHHHHHHH-HHHhhhccCCE
Confidence 5899999999999998877765321 11123356899999999999998765444444566677 77778889999
Q ss_pred EEEcChHHhhHHHHHHHhccCCcceeccCCCCcccccccccccccCccCCC-CChhhHHHHhhcCCCCcEEEEEeCCccc
Q 038830 81 ILCNTFYELEKEVTEWLGKHWLLRTIGPTLPSIYLDKQIEDDKEYGFSIFE-PDIESSMKWLNDRANGSVVYVSFGSMAT 159 (335)
Q Consensus 81 vl~nsf~elE~~~~~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~wLd~~~~~svvyvsfGS~~~ 159 (335)
||+|||+|||+++++++++..|+|+|||+++..........+...+.++|. ..++.|.+|||+++++|||||||||+..
T Consensus 197 vlvNTf~eLE~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~ 276 (449)
T PLN02173 197 VLVNSFHDLDLHENELLSKVCPVLTIGPTVPSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAK 276 (449)
T ss_pred EEEeCHHHhhHHHHHHHHhcCCeeEEcccCchhhccccccccccccccccccccchHHHHHHhcCCCCceEEEEeccccc
Confidence 999999999999999998766899999998642111111011111122332 2245799999999999999999999999
Q ss_pred CCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhc-CCceEEEeecchhhhccccCcCeEEccCCcchHHHHHhc
Q 038830 160 LKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDET-SQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTLEALSL 238 (335)
Q Consensus 160 ~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~-~~~~~v~~w~pq~~vL~h~~v~~fItHgG~nSv~Eal~~ 238 (335)
++.+|+.+++.+| ++.+|||+++......+|++|.+++ ++|+++++|+||.+||+|+++|+|||||||||++||+++
T Consensus 277 ~~~~~~~ela~gL--s~~~flWvvr~~~~~~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~ 354 (449)
T PLN02173 277 LSSEQMEEIASAI--SNFSYLWVVRASEESKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSL 354 (449)
T ss_pred CCHHHHHHHHHHh--cCCCEEEEEeccchhcccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHc
Confidence 9999999999999 7899999999654456888998888 577899999999999999999999999999999999999
Q ss_pred CCCeeecCCCCChhhhHHHHHHHhccceeecCCC-CCCcCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCh
Q 038830 239 GVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADE-KGIVRREAIAHCISEILEGKRDKEIKQNADKWRNFAKEAVAKGGS 317 (335)
Q Consensus 239 GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~-~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~ggs 317 (335)
|||||+||+++||+.||+++++.||+|+.+..++ ++.+++++|+++|+++|.+++|+++|+||+++++++++|+++|||
T Consensus 355 GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGS 434 (449)
T PLN02173 355 GVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGS 434 (449)
T ss_pred CCCEEecCchhcchHHHHHHHHHhCceEEEeecccCCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 9999999999999999999999999999996532 235799999999999999888899999999999999999999999
Q ss_pred HHHHHHHHHHHHhh
Q 038830 318 SDKNIDDFVANLIS 331 (335)
Q Consensus 318 s~~~l~~~v~~~~~ 331 (335)
|++|+++||++++-
T Consensus 435 S~~~l~~~v~~~~~ 448 (449)
T PLN02173 435 TDININTFVSKIQI 448 (449)
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999999853
No 3
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=3.2e-68 Score=521.89 Aligned_cols=312 Identities=28% Similarity=0.506 Sum_probs=264.1
Q ss_pred CcCcc-eeEechhhHHHHHHHHHhhc--CCCCC--CCCCCceecCCCCCCCCCCCCccccCCCCchhHHHHHHHHHhccc
Q 038830 1 KFGLI-GAAFLTQSCAVAGIYHHMNK--GLIKL--PLTGDQVLVPGLRPLDPQDTPSFINDSASYPAFFDMIITRQFSNI 75 (335)
Q Consensus 1 ~~gip-~~~f~~~~a~~~~~~~~~~~--~~~~~--~~~~~~~~~pg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~ 75 (335)
|+||| +++||+++|+.+++++|++. +..+- .+.++.+.+||+|+++.+|+|.++.+.. ...+..++ +.+++.
T Consensus 126 ~lgIP~~~~f~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~vPg~p~l~~~dlp~~~~~~~--~~~~~~~~-~~~~~~ 202 (470)
T PLN03015 126 DVGVTAKYVYIPSHAWFLAVMVYLPVLDTVVEGEYVDIKEPLKIPGCKPVGPKELMETMLDRS--DQQYKECV-RSGLEV 202 (470)
T ss_pred HcCCCEEEEEcCHHHHHHHHHHhhhhhhcccccccCCCCCeeeCCCCCCCChHHCCHhhcCCC--cHHHHHHH-HHHHhc
Confidence 58999 69999999999988888752 21111 1112457799999999999998665432 22244555 666678
Q ss_pred ccccEEEEcChHHhhHHHHHHHhcc--------CCcceeccCCCCcccccccccccccCccCCCCChhhHHHHhhcCCCC
Q 038830 76 DKADWILCNTFYELEKEVTEWLGKH--------WLLRTIGPTLPSIYLDKQIEDDKEYGFSIFEPDIESSMKWLNDRANG 147 (335)
Q Consensus 76 ~~~~~vl~nsf~elE~~~~~~~~~~--------~~v~~vGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~ 147 (335)
.+++++|+|||+|||+++++++++. .|+|+|||+++.. . +...+++|.+|||+++++
T Consensus 203 ~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~~v~~VGPl~~~~-----~----------~~~~~~~~~~WLd~~~~~ 267 (470)
T PLN03015 203 PMSDGVLVNTWEELQGNTLAALREDMELNRVMKVPVYPIGPIVRTN-----V----------HVEKRNSIFEWLDKQGER 267 (470)
T ss_pred ccCCEEEEechHHHhHHHHHHHHhhcccccccCCceEEecCCCCCc-----c----------cccchHHHHHHHHhCCCC
Confidence 8999999999999999999999764 4699999997420 0 011245799999999999
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCC-------------CCCcCCccchhhcCCceEEE-eecchhh
Q 038830 148 SVVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRES-------------EQSKLPENFSDETSQKGLVV-NWCPQLG 213 (335)
Q Consensus 148 svvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~-------------~~~~l~~~~~~~~~~~~~v~-~w~pq~~ 213 (335)
|||||||||...++.+|+.+++.+|+.++++|||+++.. ..+.+|++|.+|++++|+++ +|+||.+
T Consensus 268 sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~ 347 (470)
T PLN03015 268 SVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVE 347 (470)
T ss_pred CEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecCccccccccccccchhhcCChHHHHhhccCceEEEecCCHHH
Confidence 999999999999999999999999999999999999842 11258899999999999876 8999999
Q ss_pred hccccCcCeEEccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecC-CCCCCcCHHHHHHHHHHHHc--
Q 038830 214 VLAHEATGCFLTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPA-DEKGIVRREAIAHCISEILE-- 290 (335)
Q Consensus 214 vL~h~~v~~fItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~-~~~~~~~~~~l~~~i~~ll~-- 290 (335)
||+|+++|+|||||||||++||+++|||||+||+++||+.||+++++.||+|+++.. ...+.+++++|+++|+++|.
T Consensus 348 vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~ 427 (470)
T PLN03015 348 ILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVAEE 427 (470)
T ss_pred HhccCccCeEEecCCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHccC
Confidence 999999999999999999999999999999999999999999999999999999962 22236899999999999996
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHh
Q 038830 291 GKRDKEIKQNADKWRNFAKEAVAKGGSSDKNIDDFVANLI 330 (335)
Q Consensus 291 ~~~~~~~r~~a~~l~~~~~~a~~~ggss~~~l~~~v~~~~ 330 (335)
+++|++||+||++|++++++|+++||||++|+++|+++++
T Consensus 428 ~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~nl~~~~~~~~ 467 (470)
T PLN03015 428 DEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLFEWAKRCY 467 (470)
T ss_pred cccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHhcc
Confidence 3678999999999999999999999999999999999874
No 4
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=5.6e-68 Score=520.96 Aligned_cols=312 Identities=31% Similarity=0.544 Sum_probs=263.9
Q ss_pred CcCcceeEechhhHHHHHHHHHhhc----CC-CCCCC--CCCceecCCCCCCCCCCCCccccCCCCchhHHHHHHHHHhc
Q 038830 1 KFGLIGAAFLTQSCAVAGIYHHMNK----GL-IKLPL--TGDQVLVPGLRPLDPQDTPSFINDSASYPAFFDMIITRQFS 73 (335)
Q Consensus 1 ~~gip~~~f~~~~a~~~~~~~~~~~----~~-~~~~~--~~~~~~~pg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~ 73 (335)
++|||+++|||++|+++++++++.. +. .|... ++..+.+||+|+++.+|+|.+... ..+.+...+. ...
T Consensus 124 ~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~~~~~dlp~~~~~--~~~~~~~~~~-~~~- 199 (451)
T PLN02410 124 EFKLPNVIFSTTSATAFVCRSVFDKLYANNVLAPLKEPKGQQNELVPEFHPLRCKDFPVSHWA--SLESIMELYR-NTV- 199 (451)
T ss_pred HcCCCEEEEEccCHHHHHHHHHHHHHHhccCCCCccccccCccccCCCCCCCChHHCcchhcC--CcHHHHHHHH-HHh-
Confidence 5899999999999999998887532 11 23222 223456999999999999986532 2223334443 332
Q ss_pred ccccccEEEEcChHHhhHHHHHHHhccC--CcceeccCCCCcccccccccccccCccCCCCChhhHHHHhhcCCCCcEEE
Q 038830 74 NIDKADWILCNTFYELEKEVTEWLGKHW--LLRTIGPTLPSIYLDKQIEDDKEYGFSIFEPDIESSMKWLNDRANGSVVY 151 (335)
Q Consensus 74 ~~~~~~~vl~nsf~elE~~~~~~~~~~~--~v~~vGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvy 151 (335)
...++++||+|||+|||+++++++++.. |+++|||+++.. .. +.++++. +.+|.+|||+++++||||
T Consensus 200 ~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGpl~~~~--~~--------~~~~~~~-~~~~~~wLd~~~~~sVvy 268 (451)
T PLN02410 200 DKRTASSVIINTASCLESSSLSRLQQQLQIPVYPIGPLHLVA--SA--------PTSLLEE-NKSCIEWLNKQKKNSVIF 268 (451)
T ss_pred hcccCCEEEEeChHHhhHHHHHHHHhccCCCEEEeccccccc--CC--------Ccccccc-chHHHHHHHhCCCCcEEE
Confidence 4578999999999999999999998754 699999997531 00 0112222 457999999999999999
Q ss_pred EEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCC------CCcCCccchhhcCCceEEEeecchhhhccccCcCeEEc
Q 038830 152 VSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESE------QSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLT 225 (335)
Q Consensus 152 vsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~------~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~v~~fIt 225 (335)
|||||+..++.+|+.+++.||+.++++|||+++... ...+|++|++|+++|+++++|+||.+||+|+++|+|||
T Consensus 269 vsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f~er~~~~g~v~~w~PQ~~iL~h~~v~~fvt 348 (451)
T PLN02410 269 VSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSKIISGRGYIVKWAPQKEVLSHPAVGGFWS 348 (451)
T ss_pred EEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhcCChhHHHhccCCeEEEccCCHHHHhCCCccCeeee
Confidence 999999999999999999999999999999999531 12379999999999999999999999999999999999
Q ss_pred cCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Q 038830 226 HCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGKRDKEIKQNADKWR 305 (335)
Q Consensus 226 HgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~ 305 (335)
||||||++||+++|||||+||+++||+.||+++++.||+|+.+. . .+++++|+++|+++|.+++|++||+||++|+
T Consensus 349 H~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~-~---~~~~~~v~~av~~lm~~~~~~~~r~~a~~l~ 424 (451)
T PLN02410 349 HCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE-G---DLDRGAVERAVKRLMVEEEGEEMRKRAISLK 424 (451)
T ss_pred cCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC-C---cccHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999997 2 5899999999999998887899999999999
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHhh
Q 038830 306 NFAKEAVAKGGSSDKNIDDFVANLIS 331 (335)
Q Consensus 306 ~~~~~a~~~ggss~~~l~~~v~~~~~ 331 (335)
+++++|+.+||||++|+++||++++.
T Consensus 425 ~~~~~a~~~gGsS~~~l~~fv~~~~~ 450 (451)
T PLN02410 425 EQLRASVISGGSSHNSLEEFVHFMRT 450 (451)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999874
No 5
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=3.5e-67 Score=515.78 Aligned_cols=318 Identities=27% Similarity=0.513 Sum_probs=264.7
Q ss_pred CcCcceeEechhhHHHHHHHHHhhcCCCC-----CCCCCCceecCCC-CCCCCCCCCccccCCCCchhHHHHHHHHHhcc
Q 038830 1 KFGLIGAAFLTQSCAVAGIYHHMNKGLIK-----LPLTGDQVLVPGL-RPLDPQDTPSFINDSASYPAFFDMIITRQFSN 74 (335)
Q Consensus 1 ~~gip~~~f~~~~a~~~~~~~~~~~~~~~-----~~~~~~~~~~pg~-~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~ 74 (335)
++|||+++|||++|++++++++++....+ ...++..+.+||+ |+++.+|+|+++.+.+. +..+. +.+..
T Consensus 134 ~~gip~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPgl~~~l~~~dlp~~~~~~~~----~~~~~-~~~~~ 208 (468)
T PLN02207 134 DVSLPFYVFLTTNSGFLAMMQYLADRHSKDTSVFVRNSEEMLSIPGFVNPVPANVLPSALFVEDG----YDAYV-KLAIL 208 (468)
T ss_pred HhCCCEEEEECccHHHHHHHHHhhhccccccccCcCCCCCeEECCCCCCCCChHHCcchhcCCcc----HHHHH-HHHHh
Confidence 58999999999999999999888633211 1112345679999 68999999997753222 23344 55567
Q ss_pred cccccEEEEcChHHhhHHHHHHHhc--cCC-cceeccCCCCcccccccccccccCccCCCCChhhHHHHhhcCCCCcEEE
Q 038830 75 IDKADWILCNTFYELEKEVTEWLGK--HWL-LRTIGPTLPSIYLDKQIEDDKEYGFSIFEPDIESSMKWLNDRANGSVVY 151 (335)
Q Consensus 75 ~~~~~~vl~nsf~elE~~~~~~~~~--~~~-v~~vGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvy 151 (335)
..+++++|+|||++||.++++++++ ..| +++|||++... ....+. .+.+ .+++|.+|||+++++||||
T Consensus 209 ~~~~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~VGPl~~~~--~~~~~~-----~~~~--~~~~~~~WLd~~~~~sVVy 279 (468)
T PLN02207 209 FTKANGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIFDLK--AQPHPE-----QDLA--RRDELMKWLDDQPEASVVF 279 (468)
T ss_pred cccCCEEEEEchHHHhHHHHHHHHhccCCCcEEEecCCcccc--cCCCCc-----cccc--hhhHHHHHHhcCCCCcEEE
Confidence 7889999999999999999999965 334 99999997531 000000 0111 2467999999999999999
Q ss_pred EEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCC---CCcCCccchhhcCCceEEEeecchhhhccccCcCeEEccCC
Q 038830 152 VSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESE---QSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCG 228 (335)
Q Consensus 152 vsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~---~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~v~~fItHgG 228 (335)
|||||...++.+|+++++.+|+.++++|||+++... .+.+|++|++|+++|+++++|+||.+||+|+++|+||||||
T Consensus 280 vSfGS~~~~~~~q~~ela~~l~~~~~~flW~~r~~~~~~~~~lp~~f~er~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~G 359 (468)
T PLN02207 280 LCFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRTEEVTNDDLLPEGFLDRVSGRGMICGWSPQVEILAHKAVGGFVSHCG 359 (468)
T ss_pred EEeccCcCCCHHHHHHHHHHHHHCCCcEEEEEeCCCccccccCCHHHHhhcCCCeEEEEeCCHHHHhcccccceeeecCc
Confidence 999999999999999999999999999999999532 34588999999999999999999999999999999999999
Q ss_pred cchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCC----CCCCcCHHHHHHHHHHHHcCCcHHHHHHHHHHH
Q 038830 229 WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPAD----EKGIVRREAIAHCISEILEGKRDKEIKQNADKW 304 (335)
Q Consensus 229 ~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~----~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l 304 (335)
|||++||+++|||||+||+++||+.||+++++.||+|+++..+ .++.+++++|.++|+++|++ ++++||+||++|
T Consensus 360 wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~-~~~~~r~~a~~l 438 (468)
T PLN02207 360 WNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNK-DNNVVRKRVMDI 438 (468)
T ss_pred cccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHhc-chHHHHHHHHHH
Confidence 9999999999999999999999999999999988999988421 12357999999999999973 467999999999
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHhhcc
Q 038830 305 RNFAKEAVAKGGSSDKNIDDFVANLISSK 333 (335)
Q Consensus 305 ~~~~~~a~~~ggss~~~l~~~v~~~~~~~ 333 (335)
++++++|+.+||||++|+++||++++..+
T Consensus 439 ~~~a~~A~~~GGSS~~~l~~~v~~~~~~~ 467 (468)
T PLN02207 439 SQMIQRATKNGGSSFAAIEKFIHDVIGIK 467 (468)
T ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999998643
No 6
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=3.5e-67 Score=514.60 Aligned_cols=317 Identities=35% Similarity=0.669 Sum_probs=263.1
Q ss_pred CcCcceeEechhhHHHHHHHHHhhcCCCCCCCCCCceecCCCCCCCCCCCCccccCCCCchhHHHHHHHHHhcccc--cc
Q 038830 1 KFGLIGAAFLTQSCAVAGIYHHMNKGLIKLPLTGDQVLVPGLRPLDPQDTPSFINDSASYPAFFDMIITRQFSNID--KA 78 (335)
Q Consensus 1 ~~gip~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 78 (335)
|+|||+++|||++|++++++++++.+. +..+.+||+|+++.+|||+++......+.+.+.+. +.++... .+
T Consensus 125 ~lgIP~~~f~t~~a~~~~~~~~~~~~~------~~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 197 (455)
T PLN02152 125 RFHLPSVLLWIQPAFVFDIYYNYSTGN------NSVFEFPNLPSLEIRDLPSFLSPSNTNKAAQAVYQ-ELMEFLKEESN 197 (455)
T ss_pred HhCCCEEEEECccHHHHHHHHHhhccC------CCeeecCCCCCCchHHCchhhcCCCCchhHHHHHH-HHHHHhhhccC
Confidence 589999999999999999998876432 23467999999999999998754333333445555 5555443 35
Q ss_pred cEEEEcChHHhhHHHHHHHhccCCcceeccCCCCcccccccccccccCccCCCCChhhHHHHhhcCCCCcEEEEEeCCcc
Q 038830 79 DWILCNTFYELEKEVTEWLGKHWLLRTIGPTLPSIYLDKQIEDDKEYGFSIFEPDIESSMKWLNDRANGSVVYVSFGSMA 158 (335)
Q Consensus 79 ~~vl~nsf~elE~~~~~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~ 158 (335)
+++|+|||+|||++++++++. .|+|+||||++....... ....+.+.++ .+.+|.+|||+++++|||||||||+.
T Consensus 198 ~~vlvNTf~eLE~~~~~~l~~-~~v~~VGPL~~~~~~~~~---~~~~~~~~~~-~~~~~~~wLd~~~~~sVvyvsfGS~~ 272 (455)
T PLN02152 198 PKILVNTFDSLEPEFLTAIPN-IEMVAVGPLLPAEIFTGS---ESGKDLSVRD-QSSSYTLWLDSKTESSVIYVSFGTMV 272 (455)
T ss_pred CEEEEeChHHhhHHHHHhhhc-CCEEEEcccCcccccccc---ccCccccccc-cchHHHHHhhCCCCCceEEEEecccc
Confidence 799999999999999999975 489999999864210100 0000011122 25689999999999999999999999
Q ss_pred cCCHHHHHHHHHHHhhCCCcEEEEEeCCC--------CC----cCCccchhhcCCceEEEeecchhhhccccCcCeEEcc
Q 038830 159 TLKIEEMEELPCGLKASDKYFLWVVRESE--------QS----KLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTH 226 (335)
Q Consensus 159 ~~~~~~~~~l~~~l~~~~~~flw~~~~~~--------~~----~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~v~~fItH 226 (335)
.++.+|+++++.+|+.++++|||+++... .. .+|++|.+|+++|+++++|+||.+||+|+++|+||||
T Consensus 273 ~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH 352 (455)
T PLN02152 273 ELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTH 352 (455)
T ss_pred cCCHHHHHHHHHHHHHcCCCeEEEEecCcccccccccccccccccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEee
Confidence 99999999999999999999999998521 00 2467899999999999999999999999999999999
Q ss_pred CCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCCcHHHHHHHHHHHHH
Q 038830 227 CGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGKRDKEIKQNADKWRN 306 (335)
Q Consensus 227 gG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~ 306 (335)
|||||++||+++|||||+||+++||+.||+++++.||+|+.+..+.++.+++++|+++|+++|++ ++++||+||++|++
T Consensus 353 ~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~e~l~~av~~vm~~-~~~~~r~~a~~~~~ 431 (455)
T PLN02152 353 CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVERGEIRRCLEAVMEE-KSVELRESAEKWKR 431 (455)
T ss_pred CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCcHHHHHHHHHHHHhh-hHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998864433367999999999999974 46689999999999
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHh
Q 038830 307 FAKEAVAKGGSSDKNIDDFVANLI 330 (335)
Q Consensus 307 ~~~~a~~~ggss~~~l~~~v~~~~ 330 (335)
++++|+.+||||++|+++||++++
T Consensus 432 ~~~~a~~~ggsS~~nl~~li~~i~ 455 (455)
T PLN02152 432 LAIEAGGEGGSSDKNVEAFVKTLC 455 (455)
T ss_pred HHHHHHcCCCcHHHHHHHHHHHhC
Confidence 999999999999999999999874
No 7
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=7.2e-67 Score=514.67 Aligned_cols=312 Identities=29% Similarity=0.512 Sum_probs=264.3
Q ss_pred CcCcceeEechhhHHHHHHHHHhhcCCCCCC----CCCCceecCCCCCCCCCCCCccccCCCCchhHHHHHHHHHhcccc
Q 038830 1 KFGLIGAAFLTQSCAVAGIYHHMNKGLIKLP----LTGDQVLVPGLRPLDPQDTPSFINDSASYPAFFDMIITRQFSNID 76 (335)
Q Consensus 1 ~~gip~~~f~~~~a~~~~~~~~~~~~~~~~~----~~~~~~~~pg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (335)
++|||+++|||++|++++++++++...-+.. ..+..+.+||+|+++.+|+|..+.+.. +.....+. +.+....
T Consensus 123 elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~l~~~dlp~~~~~~~--~~~~~~~~-~~~~~~~ 199 (481)
T PLN02992 123 EFNMLTYIFIASNARFLGVSIYYPTLDKDIKEEHTVQRKPLAMPGCEPVRFEDTLDAYLVPD--EPVYRDFV-RHGLAYP 199 (481)
T ss_pred HcCCCEEEEecCcHHHHHHHHhhhhhccccccccccCCCCcccCCCCccCHHHhhHhhcCCC--cHHHHHHH-HHHHhcc
Confidence 5899999999999999988887753111111 112346799999999999997554422 23445566 6677778
Q ss_pred cccEEEEcChHHhhHHHHHHHhcc--------CCcceeccCCCCcccccccccccccCccCCCCChhhHHHHhhcCCCCc
Q 038830 77 KADWILCNTFYELEKEVTEWLGKH--------WLLRTIGPTLPSIYLDKQIEDDKEYGFSIFEPDIESSMKWLNDRANGS 148 (335)
Q Consensus 77 ~~~~vl~nsf~elE~~~~~~~~~~--------~~v~~vGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~s 148 (335)
+++++|+|||+|||+++++++++. .|+|+||||++.. . . ...+++|.+|||+++++|
T Consensus 200 ~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v~~VGPl~~~~---~---~---------~~~~~~c~~wLd~~~~~s 264 (481)
T PLN02992 200 KADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPVYPIGPLCRPI---Q---S---------SKTDHPVLDWLNKQPNES 264 (481)
T ss_pred cCCEEEEechHHHhHHHHHHHhhccccccccCCceEEecCccCCc---C---C---------CcchHHHHHHHHcCCCCc
Confidence 899999999999999999998752 3799999997631 0 0 012567999999999999
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCC--------------------CCcCCccchhhcCCceEEE-e
Q 038830 149 VVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESE--------------------QSKLPENFSDETSQKGLVV-N 207 (335)
Q Consensus 149 vvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~--------------------~~~l~~~~~~~~~~~~~v~-~ 207 (335)
||||||||+..++.+|+++++.+|+.++++|||++++.. ...+|++|.+|+.++++++ +
T Consensus 265 VvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~ 344 (481)
T PLN02992 265 VLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPS 344 (481)
T ss_pred eEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCcccccccccccCcccccccchhhhCCHHHHHHhcCCCEEEee
Confidence 999999999999999999999999999999999997421 1248899999999999887 8
Q ss_pred ecchhhhccccCcCeEEccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHH
Q 038830 208 WCPQLGVLAHEATGCFLTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISE 287 (335)
Q Consensus 208 w~pq~~vL~h~~v~~fItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ 287 (335)
|+||.+||+|+++|+|||||||||++||+++|||||+||+++||+.||+++++.||+|+.++.. ++.+++++|.++|++
T Consensus 345 W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~-~~~~~~~~l~~av~~ 423 (481)
T PLN02992 345 WAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDP-KEVISRSKIEALVRK 423 (481)
T ss_pred cCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCC-CCcccHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998777999999752 136899999999999
Q ss_pred HHcCCcHHHHHHHHHHHHHHHHHHHh--cCChHHHHHHHHHHHHhh
Q 038830 288 ILEGKRDKEIKQNADKWRNFAKEAVA--KGGSSDKNIDDFVANLIS 331 (335)
Q Consensus 288 ll~~~~~~~~r~~a~~l~~~~~~a~~--~ggss~~~l~~~v~~~~~ 331 (335)
+|.+++|++||++++++++++++|+. +||||++|+++||+++++
T Consensus 424 vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~~~~~ 469 (481)
T PLN02992 424 VMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTKECQR 469 (481)
T ss_pred HhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHH
Confidence 99888889999999999999999995 599999999999999875
No 8
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=1.6e-66 Score=514.89 Aligned_cols=318 Identities=26% Similarity=0.468 Sum_probs=267.2
Q ss_pred CcCcceeEechhhHHHHHHHHHhhcCC--CC--CCCCCCceecCCCCCCCCCCCCccccCCCCchhHHHHHHHHHhcccc
Q 038830 1 KFGLIGAAFLTQSCAVAGIYHHMNKGL--IK--LPLTGDQVLVPGLRPLDPQDTPSFINDSASYPAFFDMIITRQFSNID 76 (335)
Q Consensus 1 ~~gip~~~f~~~~a~~~~~~~~~~~~~--~~--~~~~~~~~~~pg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (335)
++|||+++|||++|+++++++|++... .+ ..+...++.+||+|+++.+|||.++.+.. +..+..+. ..+++..
T Consensus 129 elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPGlp~l~~~dlp~~~~~~~--~~~~~~~~-~~~~~~~ 205 (480)
T PLN00164 129 ELAVPAYVYFTSTAAMLALMLRLPALDEEVAVEFEEMEGAVDVPGLPPVPASSLPAPVMDKK--SPNYAWFV-YHGRRFM 205 (480)
T ss_pred HhCCCEEEEECccHHHHHHHhhhhhhcccccCcccccCcceecCCCCCCChHHCCchhcCCC--cHHHHHHH-HHHHhhh
Confidence 589999999999999999999886422 11 11112346799999999999998775432 22234455 5566778
Q ss_pred cccEEEEcChHHhhHHHHHHHhcc--------CCcceeccCCCCcccccccccccccCccCCCCChhhHHHHhhcCCCCc
Q 038830 77 KADWILCNTFYELEKEVTEWLGKH--------WLLRTIGPTLPSIYLDKQIEDDKEYGFSIFEPDIESSMKWLNDRANGS 148 (335)
Q Consensus 77 ~~~~vl~nsf~elE~~~~~~~~~~--------~~v~~vGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~s 148 (335)
+++++|+|||+|||+++++++++. .|+|+|||+++.. .. + . ... .+++|.+|||+++++|
T Consensus 206 ~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~~~v~~vGPl~~~~--~~--~-~------~~~-~~~~~~~wLd~~~~~s 273 (480)
T PLN00164 206 EAAGIIVNTAAELEPGVLAAIADGRCTPGRPAPTVYPIGPVISLA--FT--P-P------AEQ-PPHECVRWLDAQPPAS 273 (480)
T ss_pred hcCEEEEechHHhhHHHHHHHHhccccccCCCCceEEeCCCcccc--cc--C-C------Ccc-chHHHHHHHHhCCCCc
Confidence 899999999999999999999764 2599999997531 00 0 0 011 2678999999999999
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCC------------CCcCCccchhhcCCceEEE-eecchhhhc
Q 038830 149 VVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESE------------QSKLPENFSDETSQKGLVV-NWCPQLGVL 215 (335)
Q Consensus 149 vvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~------------~~~l~~~~~~~~~~~~~v~-~w~pq~~vL 215 (335)
||||||||+..++.+|+.+++.+|+.++++|||+++... ...+|++|.+|++++++++ +|+||.+||
T Consensus 274 vvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL 353 (480)
T PLN00164 274 VVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQKEIL 353 (480)
T ss_pred eEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEEcCCcccccccccccchhhhCChHHHHHhcCCCeEEeecCCHHHHh
Confidence 999999999999999999999999999999999998531 1237889999999999888 899999999
Q ss_pred cccCcCeEEccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCC--CCCcCHHHHHHHHHHHHcCC-
Q 038830 216 AHEATGCFLTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADE--KGIVRREAIAHCISEILEGK- 292 (335)
Q Consensus 216 ~h~~v~~fItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~--~~~~~~~~l~~~i~~ll~~~- 292 (335)
+|+++|+|||||||||++||+++|||||+||+++||+.||+++++.||+|+.+..++ ++.+++++|.++|+++|.++
T Consensus 354 ~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~ 433 (480)
T PLN00164 354 AHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGE 433 (480)
T ss_pred cCcccCeEEeecccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCc
Confidence 999999999999999999999999999999999999999999998889999986321 23579999999999999764
Q ss_pred -cHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhhcc
Q 038830 293 -RDKEIKQNADKWRNFAKEAVAKGGSSDKNIDDFVANLISSK 333 (335)
Q Consensus 293 -~~~~~r~~a~~l~~~~~~a~~~ggss~~~l~~~v~~~~~~~ 333 (335)
+|+.+|+||+++++++++|+.+||||++++++||+++++..
T Consensus 434 ~~~~~~r~~a~~~~~~~~~a~~~gGSS~~~l~~~v~~~~~~~ 475 (480)
T PLN00164 434 EEGRKAREKAAEMKAACRKAVEEGGSSYAALQRLAREIRHGA 475 (480)
T ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhcc
Confidence 48899999999999999999999999999999999998753
No 9
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=4.1e-66 Score=509.09 Aligned_cols=328 Identities=32% Similarity=0.607 Sum_probs=265.2
Q ss_pred CcCcceeEechhhHHHHHHHHHhhcCCCCCCC--C-CCceecCCCCCCCCCCCCccccCCCCchhHHHHHHHHHhccccc
Q 038830 1 KFGLIGAAFLTQSCAVAGIYHHMNKGLIKLPL--T-GDQVLVPGLRPLDPQDTPSFINDSASYPAFFDMIITRQFSNIDK 77 (335)
Q Consensus 1 ~~gip~~~f~~~~a~~~~~~~~~~~~~~~~~~--~-~~~~~~pg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (335)
++|||+++|||++|++++++++++....+... + +..+.+||+|+++.+|+|+++.+... .....+..+..+...+
T Consensus 122 ~lgIP~~~f~~~sa~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~dl~~~~~~~~~--~~~~~~~~~~~~~~~~ 199 (456)
T PLN02210 122 AHNIPCAILWIQACGAYSVYYRYYMKTNSFPDLEDLNQTVELPALPLLEVRDLPSFMLPSGG--AHFNNLMAEFADCLRY 199 (456)
T ss_pred HhCCCEEEEecccHHHHHHHHhhhhccCCCCcccccCCeeeCCCCCCCChhhCChhhhcCCc--hHHHHHHHHHHHhccc
Confidence 58999999999999999998887532222211 1 23467999999999999987754322 2222233133345567
Q ss_pred ccEEEEcChHHhhHHHHHHHhccCCcceeccCCCCcccccccc-cccccCccCCCCChhhHHHHhhcCCCCcEEEEEeCC
Q 038830 78 ADWILCNTFYELEKEVTEWLGKHWLLRTIGPTLPSIYLDKQIE-DDKEYGFSIFEPDIESSMKWLNDRANGSVVYVSFGS 156 (335)
Q Consensus 78 ~~~vl~nsf~elE~~~~~~~~~~~~v~~vGPl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS 156 (335)
++++++|||++||+++++++++..|+|+|||+++......... .....+.++|++ +++|.+|||+++++|||||||||
T Consensus 200 ~~~vlvNTf~eLE~~~~~~l~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~wld~~~~~svvyvsfGS 278 (456)
T PLN02210 200 VKWVLVNSFYELESEIIESMADLKPVIPIGPLVSPFLLGDDEEETLDGKNLDMCKS-DDCCMEWLDKQARSSVVYISFGS 278 (456)
T ss_pred CCEEEEeCHHHHhHHHHHHHhhcCCEEEEcccCchhhcCccccccccccccccccc-chHHHHHHhCCCCCceEEEEecc
Confidence 8999999999999999999987657999999986321111000 001111234554 67899999999999999999999
Q ss_pred cccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhc-CCceEEEeecchhhhccccCcCeEEccCCcchHHHH
Q 038830 157 MATLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDET-SQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTLEA 235 (335)
Q Consensus 157 ~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~-~~~~~v~~w~pq~~vL~h~~v~~fItHgG~nSv~Ea 235 (335)
....+.+++++++.+|+.++++|||+++.......++.+.+++ ++|+++++|+||.+||+|+++|+|||||||||++||
T Consensus 279 ~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~~~~~~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Ea 358 (456)
T PLN02210 279 MLESLENQVETIAKALKNRGVPFLWVIRPKEKAQNVQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIET 358 (456)
T ss_pred cccCCHHHHHHHHHHHHhCCCCEEEEEeCCccccchhhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHH
Confidence 9999999999999999999999999998643222345566676 488999999999999999999999999999999999
Q ss_pred HhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCC-CCCcCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhc
Q 038830 236 LSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADE-KGIVRREAIAHCISEILEGKRDKEIKQNADKWRNFAKEAVAK 314 (335)
Q Consensus 236 l~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~-~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~ 314 (335)
+++|||||+||+++||+.||+++++.||+|+.+...+ ++.+++++|+++|+++|.+++|++||+||++|++.+++|+++
T Consensus 359 i~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~ 438 (456)
T PLN02210 359 VVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAP 438 (456)
T ss_pred HHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999779999996432 346899999999999998888899999999999999999999
Q ss_pred CChHHHHHHHHHHHHhh
Q 038830 315 GGSSDKNIDDFVANLIS 331 (335)
Q Consensus 315 ggss~~~l~~~v~~~~~ 331 (335)
||||++|+++||++++-
T Consensus 439 gGSS~~~l~~~v~~~~~ 455 (456)
T PLN02210 439 GGSSARNLDLFISDITI 455 (456)
T ss_pred CCcHHHHHHHHHHHHhc
Confidence 99999999999999863
No 10
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=1.2e-65 Score=507.72 Aligned_cols=326 Identities=28% Similarity=0.522 Sum_probs=262.3
Q ss_pred CcCcceeEechhhHHHHHHHHHhhc--CCCCCCCCCCceecCCCCC---CCCCCCCccccCCCCchhHHHHHHHHHhcc-
Q 038830 1 KFGLIGAAFLTQSCAVAGIYHHMNK--GLIKLPLTGDQVLVPGLRP---LDPQDTPSFINDSASYPAFFDMIITRQFSN- 74 (335)
Q Consensus 1 ~~gip~~~f~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~pg~~~---~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~- 74 (335)
++|||+++|||++|+++++++++.. +..+...++.++.+||+|+ ++.+|||+++...... +.+. +.+..
T Consensus 138 ~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~p~~~~l~~~dlp~~~~~~~~~----~~~~-~~~~~~ 212 (491)
T PLN02534 138 RFNIPRIVFHGMCCFSLLSSHNIRLHNAHLSVSSDSEPFVVPGMPQSIEITRAQLPGAFVSLPDL----DDVR-NKMREA 212 (491)
T ss_pred HhCCCeEEEecchHHHHHHHHHHHHhcccccCCCCCceeecCCCCccccccHHHCChhhcCcccH----HHHH-HHHHhh
Confidence 5899999999999999988765542 2222333445678999985 8999999865432212 2233 33333
Q ss_pred cccccEEEEcChHHhhHHHHHHHhccC--CcceeccCCCCcccccccccccccCccCCCCChhhHHHHhhcCCCCcEEEE
Q 038830 75 IDKADWILCNTFYELEKEVTEWLGKHW--LLRTIGPTLPSIYLDKQIEDDKEYGFSIFEPDIESSMKWLNDRANGSVVYV 152 (335)
Q Consensus 75 ~~~~~~vl~nsf~elE~~~~~~~~~~~--~v~~vGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyv 152 (335)
..++++||+|||+|||+++++++++.. |+|+||||++...... +..........++++|++|||+++++|||||
T Consensus 213 ~~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~VGPL~~~~~~~~----~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyv 288 (491)
T PLN02534 213 ESTAFGVVVNSFNELEHGCAEAYEKAIKKKVWCVGPVSLCNKRNL----DKFERGNKASIDETQCLEWLDSMKPRSVIYA 288 (491)
T ss_pred cccCCEEEEecHHHhhHHHHHHHHhhcCCcEEEECcccccccccc----cccccCCccccchHHHHHHHhcCCCCceEEE
Confidence 346889999999999999999998754 6999999975311000 0000001111124579999999999999999
Q ss_pred EeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCC-----C-cCCccchhhcCCceEEE-eecchhhhccccCcCeEEc
Q 038830 153 SFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQ-----S-KLPENFSDETSQKGLVV-NWCPQLGVLAHEATGCFLT 225 (335)
Q Consensus 153 sfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~-----~-~l~~~~~~~~~~~~~v~-~w~pq~~vL~h~~v~~fIt 225 (335)
||||+..++.+|+.+++.+|+.++++|||+++.... . .+|++|.+++.++++++ +|+||..||+|+++|+|||
T Consensus 289 sfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvt 368 (491)
T PLN02534 289 CLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLT 368 (491)
T ss_pred EecccccCCHHHHHHHHHHHHhCCCCEEEEEecCccccchhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEe
Confidence 999999999999999999999999999999995311 1 36789988887777766 8999999999999999999
Q ss_pred cCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCC-------CC--C-CcCHHHHHHHHHHHHc--CCc
Q 038830 226 HCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPAD-------EK--G-IVRREAIAHCISEILE--GKR 293 (335)
Q Consensus 226 HgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~-------~~--~-~~~~~~l~~~i~~ll~--~~~ 293 (335)
||||||++||+++|||||+||+++||+.||+++++.||+|+++... ++ + .+++++|+++|+++|. +++
T Consensus 369 H~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~ee 448 (491)
T PLN02534 369 HCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEE 448 (491)
T ss_pred cCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhcccccc
Confidence 9999999999999999999999999999999999999999988421 11 2 4899999999999997 577
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhhccCC
Q 038830 294 DKEIKQNADKWRNFAKEAVAKGGSSDKNIDDFVANLISSKSL 335 (335)
Q Consensus 294 ~~~~r~~a~~l~~~~~~a~~~ggss~~~l~~~v~~~~~~~~~ 335 (335)
|++||+||++|++++++|+.+||||++||++||+++++..+|
T Consensus 449 g~~~R~rA~elk~~a~~Av~~GGSS~~nl~~fv~~i~~~~~~ 490 (491)
T PLN02534 449 GERRRRRAQELGVMARKAMELGGSSHINLSILIQDVLKQQSL 490 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcc
Confidence 899999999999999999999999999999999999987665
No 11
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=4.7e-66 Score=506.12 Aligned_cols=303 Identities=32% Similarity=0.518 Sum_probs=254.4
Q ss_pred CcCcceeEechhhHHHHHHHHHhhcCC--CCCC--CCCCceecCCCCCCCCCCCCccccCCCCchhHHHHHHHHHhcccc
Q 038830 1 KFGLIGAAFLTQSCAVAGIYHHMNKGL--IKLP--LTGDQVLVPGLRPLDPQDTPSFINDSASYPAFFDMIITRQFSNID 76 (335)
Q Consensus 1 ~~gip~~~f~~~~a~~~~~~~~~~~~~--~~~~--~~~~~~~~pg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (335)
++|||+++|||++|+++++++|++... .+.. .+...+.+||+|+++.+|||+++.+.+ +.....+. +.+....
T Consensus 131 ~lgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~~~v~iPg~p~l~~~dlp~~~~~~~--~~~~~~~~-~~~~~~~ 207 (451)
T PLN03004 131 DFTFPVYFFYTSGAACLAFSFYLPTIDETTPGKNLKDIPTVHIPGVPPMKGSDMPKAVLERD--DEVYDVFI-MFGKQLS 207 (451)
T ss_pred HhCCCEEEEeCHhHHHHHHHHHHHhccccccccccccCCeecCCCCCCCChHHCchhhcCCc--hHHHHHHH-HHHHhhc
Confidence 589999999999999999999976422 2111 112346799999999999999876432 23445556 6667778
Q ss_pred cccEEEEcChHHhhHHHHHHHhcc---CCcceeccCCCCcccccccccccccCccCCCCChhhHHHHhhcCCCCcEEEEE
Q 038830 77 KADWILCNTFYELEKEVTEWLGKH---WLLRTIGPTLPSIYLDKQIEDDKEYGFSIFEPDIESSMKWLNDRANGSVVYVS 153 (335)
Q Consensus 77 ~~~~vl~nsf~elE~~~~~~~~~~---~~v~~vGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvs 153 (335)
+++++|+|||+|||+++++++++. .|+|+||||++.. ... + +. . ..+.+|++|||+++++||||||
T Consensus 208 ~~~~vl~NTf~eLE~~~l~~l~~~~~~~~v~~vGPl~~~~----~~~-~---~~-~--~~~~~c~~wLd~~~~~sVvyvs 276 (451)
T PLN03004 208 KSSGIIINTFDALENRAIKAITEELCFRNIYPIGPLIVNG----RIE-D---RN-D--NKAVSCLNWLDSQPEKSVVFLC 276 (451)
T ss_pred ccCeeeeeeHHHhHHHHHHHHHhcCCCCCEEEEeeeccCc----ccc-c---cc-c--chhhHHHHHHHhCCCCceEEEE
Confidence 899999999999999999999764 2699999997531 000 0 00 1 1146799999999999999999
Q ss_pred eCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCC--------CC-cCCccchhhcCCceEEE-eecchhhhccccCcCeE
Q 038830 154 FGSMATLKIEEMEELPCGLKASDKYFLWVVRESE--------QS-KLPENFSDETSQKGLVV-NWCPQLGVLAHEATGCF 223 (335)
Q Consensus 154 fGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~--------~~-~l~~~~~~~~~~~~~v~-~w~pq~~vL~h~~v~~f 223 (335)
|||+..++.+|+++|+.+|+.++++|||+++... .. .+|++|++|++++++++ +|+||.+||+|+++|+|
T Consensus 277 fGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~F 356 (451)
T PLN03004 277 FGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGF 356 (451)
T ss_pred ecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceE
Confidence 9999999999999999999999999999999531 12 38899999999888766 89999999999999999
Q ss_pred EccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCCcHHHHHHHHHH
Q 038830 224 LTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGKRDKEIKQNADK 303 (335)
Q Consensus 224 ItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~ 303 (335)
||||||||++||+++|||||+||+++||+.||+++++.||+|+++..++.+.+++++|.++|+++|+++ +||+|+++
T Consensus 357 vTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~~~---~~r~~a~~ 433 (451)
T PLN03004 357 VTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFVSSTEVEKRVQEIIGEC---PVRERTMA 433 (451)
T ss_pred eccCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCccCHHHHHHHHHHHhcCH---HHHHHHHH
Confidence 999999999999999999999999999999999999988999999754233689999999999999876 89999999
Q ss_pred HHHHHHHHHhcCChHHH
Q 038830 304 WRNFAKEAVAKGGSSDK 320 (335)
Q Consensus 304 l~~~~~~a~~~ggss~~ 320 (335)
+++++++|+++||||++
T Consensus 434 ~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 434 MKNAAELALTETGSSHT 450 (451)
T ss_pred HHHHHHHHhcCCCCCCC
Confidence 99999999999999975
No 12
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.7e-65 Score=506.59 Aligned_cols=325 Identities=29% Similarity=0.467 Sum_probs=265.3
Q ss_pred CcCcceeEechhhHHHHHHHHHhhcCCCCC---CCCCCce---ecCCCCCCCCCCCCccccCCCCchhHHHHHHHHHhcc
Q 038830 1 KFGLIGAAFLTQSCAVAGIYHHMNKGLIKL---PLTGDQV---LVPGLRPLDPQDTPSFINDSASYPAFFDMIITRQFSN 74 (335)
Q Consensus 1 ~~gip~~~f~~~~a~~~~~~~~~~~~~~~~---~~~~~~~---~~pg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~ 74 (335)
++|||+++|||++|+++++|++++.+.... .+.++.+ .+||+|+++.+|||.+++.....+...+.+. +.+..
T Consensus 133 e~GIP~~~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~~-~~~~~ 211 (477)
T PLN02863 133 QLGIRRFVFSPSGAMALSIMYSLWREMPTKINPDDQNEILSFSKIPNCPKYPWWQISSLYRSYVEGDPAWEFIK-DSFRA 211 (477)
T ss_pred HcCCCEEEEeccCHHHHHHHHHHhhcccccccccccccccccCCCCCCCCcChHhCchhhhccCccchHHHHHH-HHHhh
Confidence 589999999999999999999987543211 1112222 4799999999999987754323333445555 55655
Q ss_pred cccccEEEEcChHHhhHHHHHHHhcc---CCcceeccCCCCcccccccccccccCccCCCCChhhHHHHhhcCCCCcEEE
Q 038830 75 IDKADWILCNTFYELEKEVTEWLGKH---WLLRTIGPTLPSIYLDKQIEDDKEYGFSIFEPDIESSMKWLNDRANGSVVY 151 (335)
Q Consensus 75 ~~~~~~vl~nsf~elE~~~~~~~~~~---~~v~~vGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvy 151 (335)
...++++|+|||+|||+++++++++. .|+|+||||++... .... ....+.+.+. .+++|.+|||.++++||||
T Consensus 212 ~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~v~~IGPL~~~~~-~~~~--~~~~~~~~~~-~~~~~~~WLd~~~~~svVy 287 (477)
T PLN02863 212 NIASWGLVVNSFTELEGIYLEHLKKELGHDRVWAVGPILPLSG-EKSG--LMERGGPSSV-SVDDVMTWLDTCEDHKVVY 287 (477)
T ss_pred hccCCEEEEecHHHHHHHHHHHHHhhcCCCCeEEeCCCccccc-cccc--ccccCCcccc-cHHHHHHHHhcCCCCceEE
Confidence 66789999999999999999999875 36999999986421 0000 0011111111 2567999999999999999
Q ss_pred EEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCC-----CCcCCccchhhcCCceEEE-eecchhhhccccCcCeEEc
Q 038830 152 VSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESE-----QSKLPENFSDETSQKGLVV-NWCPQLGVLAHEATGCFLT 225 (335)
Q Consensus 152 vsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~-----~~~l~~~~~~~~~~~~~v~-~w~pq~~vL~h~~v~~fIt 225 (335)
|||||+..++.+|+.+++.+|+.++++|||+++... ...+|++|.+|+.++++++ +|+||.+||+|+++++|||
T Consensus 288 vsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvt 367 (477)
T PLN02863 288 VCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEESDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLT 367 (477)
T ss_pred EEeeceecCCHHHHHHHHHHHHhCCCcEEEEECCCcccccchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEe
Confidence 999999999999999999999999999999998532 2358889998988877776 8999999999999999999
Q ss_pred cCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Q 038830 226 HCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGKRDKEIKQNADKWR 305 (335)
Q Consensus 226 HgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~ 305 (335)
||||||++||+++|||||+||+++||+.||+++++.||+|+++..+..+.++++++.++|+++|. ++++||+||++++
T Consensus 368 H~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~~~v~~~v~~~m~--~~~~~r~~a~~l~ 445 (477)
T PLN02863 368 HCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDSDELARVFMESVS--ENQVERERAKELR 445 (477)
T ss_pred cCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCcCHHHHHHHHHHHhh--ccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999899999996432235799999999999994 2359999999999
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHhhc
Q 038830 306 NFAKEAVAKGGSSDKNIDDFVANLISS 332 (335)
Q Consensus 306 ~~~~~a~~~ggss~~~l~~~v~~~~~~ 332 (335)
+++++|+.+||||++|+++||+++++.
T Consensus 446 e~a~~Av~~gGSS~~~l~~~v~~i~~~ 472 (477)
T PLN02863 446 RAALDAIKERGSSVKDLDGFVKHVVEL 472 (477)
T ss_pred HHHHHHhccCCcHHHHHHHHHHHHHHh
Confidence 999999999999999999999999864
No 13
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=3.5e-65 Score=505.67 Aligned_cols=317 Identities=27% Similarity=0.532 Sum_probs=263.3
Q ss_pred CcCcceeEechhhHHHHHHHHHhhcC--CCC--CC--CCCCceecCCCC-CCCCCCCCccccCCCCchhHHHHHHHHHhc
Q 038830 1 KFGLIGAAFLTQSCAVAGIYHHMNKG--LIK--LP--LTGDQVLVPGLR-PLDPQDTPSFINDSASYPAFFDMIITRQFS 73 (335)
Q Consensus 1 ~~gip~~~f~~~~a~~~~~~~~~~~~--~~~--~~--~~~~~~~~pg~~-~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~ 73 (335)
|+|||+++|||++|++++++++++.. ..+ .. ..+.++.+||+| +++..|+|.++.+... .+.+. +.++
T Consensus 137 elgIP~v~F~t~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPgl~~~l~~~dlp~~~~~~~~----~~~~~-~~~~ 211 (475)
T PLN02167 137 EFNLPSYIFLTCNAGFLGMMKYLPERHRKTASEFDLSSGEEELPIPGFVNSVPTKVLPPGLFMKES----YEAWV-EIAE 211 (475)
T ss_pred HhCCCEEEEECccHHHHHHHHHHHHhccccccccccCCCCCeeECCCCCCCCChhhCchhhhCcch----HHHHH-HHHH
Confidence 58999999999999999999887632 221 11 112446799995 7999999987654321 33455 6666
Q ss_pred ccccccEEEEcChHHhhHHHHHHHhcc---C-CcceeccCCCCcccccccccccccCccCCCCChhhHHHHhhcCCCCcE
Q 038830 74 NIDKADWILCNTFYELEKEVTEWLGKH---W-LLRTIGPTLPSIYLDKQIEDDKEYGFSIFEPDIESSMKWLNDRANGSV 149 (335)
Q Consensus 74 ~~~~~~~vl~nsf~elE~~~~~~~~~~---~-~v~~vGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sv 149 (335)
+..++++||+|||+|||+++++++++. . |+|+|||+++.. .. .. ......++.+|.+|||.++++||
T Consensus 212 ~~~~a~~vlvNTf~eLE~~~~~~l~~~~~~~p~v~~vGpl~~~~---~~--~~----~~~~~~~~~~~~~wld~~~~~sv 282 (475)
T PLN02167 212 RFPEAKGILVNSFTELEPNAFDYFSRLPENYPPVYPVGPILSLK---DR--TS----PNLDSSDRDRIMRWLDDQPESSV 282 (475)
T ss_pred hhcccCEeeeccHHHHHHHHHHHHHhhcccCCeeEEeccccccc---cc--cC----CCCCcchhHHHHHHHhcCCCCce
Confidence 778899999999999999999999754 3 599999997631 00 00 00111124679999999999999
Q ss_pred EEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCC------CCcCCccchhhcCCceEEEeecchhhhccccCcCeE
Q 038830 150 VYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESE------QSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCF 223 (335)
Q Consensus 150 vyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~------~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~v~~f 223 (335)
|||||||+..++.+|+.+++.+|+.++++|||+++... ...+|++|.+|+.+++++++|+||.+||+|+++|+|
T Consensus 283 vyvsfGS~~~~~~~~~~ela~~l~~~~~~flw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~~iL~h~~vg~f 362 (475)
T PLN02167 283 VFLCFGSLGSLPAPQIKEIAQALELVGCRFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQVEILAHKAIGGF 362 (475)
T ss_pred EEEeecccccCCHHHHHHHHHHHHhCCCcEEEEEecCcccccchhhhCChHHHHHhccCeeeeccCCHHHHhcCcccCeE
Confidence 99999999999999999999999999999999998531 124889999999999999999999999999999999
Q ss_pred EccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCC----CCCCcCHHHHHHHHHHHHcCCcHHHHHH
Q 038830 224 LTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPAD----EKGIVRREAIAHCISEILEGKRDKEIKQ 299 (335)
Q Consensus 224 ItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~----~~~~~~~~~l~~~i~~ll~~~~~~~~r~ 299 (335)
||||||||++||+++|||||+||+++||+.||+++++.||+|+.+... .++.+++++|+++|+++|.++ ++||+
T Consensus 363 vtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~--~~~r~ 440 (475)
T PLN02167 363 VSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGE--DVPRK 440 (475)
T ss_pred EeeCCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcCC--HHHHH
Confidence 999999999999999999999999999999999988778999998642 113579999999999999764 38999
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHHHhhcc
Q 038830 300 NADKWRNFAKEAVAKGGSSDKNIDDFVANLISSK 333 (335)
Q Consensus 300 ~a~~l~~~~~~a~~~ggss~~~l~~~v~~~~~~~ 333 (335)
||+++++.+++|+.+||||++|+++||++++...
T Consensus 441 ~a~~~~~~~~~av~~gGsS~~~l~~~v~~i~~~~ 474 (475)
T PLN02167 441 KVKEIAEAARKAVMDGGSSFVAVKRFIDDLLGDH 474 (475)
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999998754
No 14
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1.4e-64 Score=502.19 Aligned_cols=317 Identities=28% Similarity=0.511 Sum_probs=263.9
Q ss_pred CcCcceeEechhhHHHHHHHHHhhcCC----CCCC---CCCCceecCCCC-CCCCCCCCccccCCCCchhHHHHHHHHHh
Q 038830 1 KFGLIGAAFLTQSCAVAGIYHHMNKGL----IKLP---LTGDQVLVPGLR-PLDPQDTPSFINDSASYPAFFDMIITRQF 72 (335)
Q Consensus 1 ~~gip~~~f~~~~a~~~~~~~~~~~~~----~~~~---~~~~~~~~pg~~-~~~~~dlp~~~~~~~~~~~~~~~~~~~~~ 72 (335)
++|||+++|||++|+++++++|++... .++. +.+..+.+||++ +++.+|+|+++.+. .+.+.++ +..
T Consensus 131 ~lgIP~~~F~t~sa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iPgl~~pl~~~dlp~~~~~~----~~~~~~~-~~~ 205 (481)
T PLN02554 131 EFGVPSYMFYTSNATFLGLQLHVQMLYDEKKYDVSELEDSEVELDVPSLTRPYPVKCLPSVLLSK----EWLPLFL-AQA 205 (481)
T ss_pred HhCCCEEEEeCCcHHHHHHHHhhhhhccccccCccccCCCCceeECCCCCCCCCHHHCCCcccCH----HHHHHHH-HHH
Confidence 589999999999999999999886432 1211 112346799995 89999999876432 3345566 677
Q ss_pred cccccccEEEEcChHHhhHHHHHHHhc---cC-CcceeccCCCCcccccccccccccCccCCCCChhhHHHHhhcCCCCc
Q 038830 73 SNIDKADWILCNTFYELEKEVTEWLGK---HW-LLRTIGPTLPSIYLDKQIEDDKEYGFSIFEPDIESSMKWLNDRANGS 148 (335)
Q Consensus 73 ~~~~~~~~vl~nsf~elE~~~~~~~~~---~~-~v~~vGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~s 148 (335)
..+.+++++|+|||+|||++++.++.+ .. ++++|||+++.. ..... .. .+.+.+|.+|||+++++|
T Consensus 206 ~~~~~~~gvlvNt~~eLe~~~~~~l~~~~~~~~~v~~vGpl~~~~----~~~~~----~~--~~~~~~~~~wLd~~~~~s 275 (481)
T PLN02554 206 RRFREMKGILVNTVAELEPQALKFFSGSSGDLPPVYPVGPVLHLE----NSGDD----SK--DEKQSEILRWLDEQPPKS 275 (481)
T ss_pred HhcccCCEEEEechHHHhHHHHHHHHhcccCCCCEEEeCCCcccc----ccccc----cc--cccchHHHHHHhcCCCCc
Confidence 778899999999999999999999975 22 599999995421 00000 00 123568999999999999
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCC--------------CCcCCccchhhcCCceEEEeecchhhh
Q 038830 149 VVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESE--------------QSKLPENFSDETSQKGLVVNWCPQLGV 214 (335)
Q Consensus 149 vvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~--------------~~~l~~~~~~~~~~~~~v~~w~pq~~v 214 (335)
||||||||+..++.+++.+++.+|+.++++|||+++... ...+|++|.+|+++|+++++|+||.+|
T Consensus 276 vvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ~~i 355 (481)
T PLN02554 276 VVFLCFGSMGGFSEEQAREIAIALERSGHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQVAV 355 (481)
T ss_pred EEEEeccccccCCHHHHHHHHHHHHHcCCCeEEEEcCCcccccccccccccchhhhCChHHHHHhccCceEEeeCCHHHH
Confidence 999999999999999999999999999999999998521 123688999999999999999999999
Q ss_pred ccccCcCeEEccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCC--------CCCCcCHHHHHHHHH
Q 038830 215 LAHEATGCFLTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPAD--------EKGIVRREAIAHCIS 286 (335)
Q Consensus 215 L~h~~v~~fItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~--------~~~~~~~~~l~~~i~ 286 (335)
|+|+++|+|||||||||++||+++|||||+||+++||+.||+++++.||+|+.+... ..+.+++++|+++|+
T Consensus 356 L~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~ 435 (481)
T PLN02554 356 LAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIR 435 (481)
T ss_pred hCCcccCcccccCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHHHHHH
Confidence 999999999999999999999999999999999999999998877777999998631 123689999999999
Q ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhhccC
Q 038830 287 EILEGKRDKEIKQNADKWRNFAKEAVAKGGSSDKNIDDFVANLISSKS 334 (335)
Q Consensus 287 ~ll~~~~~~~~r~~a~~l~~~~~~a~~~ggss~~~l~~~v~~~~~~~~ 334 (335)
++|.++ ++||+||+++++++++|+++||||+.|+++||+++++..+
T Consensus 436 ~vm~~~--~~~r~~a~~l~~~~~~av~~gGss~~~l~~lv~~~~~~~~ 481 (481)
T PLN02554 436 CLMEQD--SDVRKRVKEMSEKCHVALMDGGSSHTALKKFIQDVTKNIA 481 (481)
T ss_pred HHhcCC--HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhhCC
Confidence 999632 3899999999999999999999999999999999998653
No 15
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=3.5e-64 Score=494.73 Aligned_cols=312 Identities=28% Similarity=0.474 Sum_probs=260.1
Q ss_pred CcCcceeEechhhHHHHHHHHHhhc----CCCCCCC---CCCce-ecCCCCCCCCCCCCccccCCCCchhHHHHHHHHHh
Q 038830 1 KFGLIGAAFLTQSCAVAGIYHHMNK----GLIKLPL---TGDQV-LVPGLRPLDPQDTPSFINDSASYPAFFDMIITRQF 72 (335)
Q Consensus 1 ~~gip~~~f~~~~a~~~~~~~~~~~----~~~~~~~---~~~~~-~~pg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~ 72 (335)
|+|||+++|||++|++++++++++. +..+..+ ..+.+ .+||+|+++.+|+|.++.+....+..++.+. +.+
T Consensus 122 ~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pg~~~l~~~dl~~~~~~~~~~~~~~~~~~-~~~ 200 (448)
T PLN02562 122 RCGVPVAGFWPVMLAAYRLIQAIPELVRTGLISETGCPRQLEKICVLPEQPLLSTEDLPWLIGTPKARKARFKFWT-RTL 200 (448)
T ss_pred HhCCCEEEEechhHHHHHHHHHHHHHhhccccccccccccccccccCCCCCCCChhhCcchhcCCCcchHHHHHHH-HHH
Confidence 5899999999999999998887652 2222111 11233 6899999999999997754322333456666 777
Q ss_pred cccccccEEEEcChHHhhHHHHHHHhc-----cC-CcceeccCCCCcccccccccccccCccCCCCChhhHHHHhhcCCC
Q 038830 73 SNIDKADWILCNTFYELEKEVTEWLGK-----HW-LLRTIGPTLPSIYLDKQIEDDKEYGFSIFEPDIESSMKWLNDRAN 146 (335)
Q Consensus 73 ~~~~~~~~vl~nsf~elE~~~~~~~~~-----~~-~v~~vGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~ 146 (335)
+...++++||+|||+|||+++++++++ .. ++++|||+++... . . ..+...+.+ +.+|++|||++++
T Consensus 201 ~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~v~~iGpl~~~~~--~----~-~~~~~~~~~-~~~c~~wLd~~~~ 272 (448)
T PLN02562 201 ERTKSLRWILMNSFKDEEYDDVKNHQASYNNGQNPQILQIGPLHNQEA--T----T-ITKPSFWEE-DMSCLGWLQEQKP 272 (448)
T ss_pred hccccCCEEEEcChhhhCHHHHHHHHhhhccccCCCEEEecCcccccc--c----c-cCCCccccc-hHHHHHHHhcCCC
Confidence 778889999999999999999998764 23 4999999975410 0 0 001112233 5779999999999
Q ss_pred CcEEEEEeCCcc-cCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchhhhccccCcCeEEc
Q 038830 147 GSVVYVSFGSMA-TLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLT 225 (335)
Q Consensus 147 ~svvyvsfGS~~-~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~v~~fIt 225 (335)
+|||||||||+. .++.+++++++.+|+.++++|||+++.+....+|++|.+++++|+++++|+||.+||+|+++|+|||
T Consensus 273 ~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~~~~~~l~~~~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvt 352 (448)
T PLN02562 273 NSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNPVWREGLPPGYVERVSKQGKVVSWAPQLEVLKHQAVGCYLT 352 (448)
T ss_pred CceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcCCchhhCCHHHHHHhccCEEEEecCCHHHHhCCCccceEEe
Confidence 999999999986 6789999999999999999999999865444688899999999999999999999999999999999
Q ss_pred cCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Q 038830 226 HCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGKRDKEIKQNADKWR 305 (335)
Q Consensus 226 HgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~ 305 (335)
||||||++||+++|||||+||+++||+.||+++++.||+|+.+. .+++++|+++|+++|.++ +||+||++++
T Consensus 353 H~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~-----~~~~~~l~~~v~~~l~~~---~~r~~a~~l~ 424 (448)
T PLN02562 353 HCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS-----GFGQKEVEEGLRKVMEDS---GMGERLMKLR 424 (448)
T ss_pred cCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC-----CCCHHHHHHHHHHHhCCH---HHHHHHHHHH
Confidence 99999999999999999999999999999999998889999985 369999999999999877 8999999999
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHh
Q 038830 306 NFAKEAVAKGGSSDKNIDDFVANLI 330 (335)
Q Consensus 306 ~~~~~a~~~ggss~~~l~~~v~~~~ 330 (335)
++++++ .+||||++|+++||++++
T Consensus 425 ~~~~~~-~~gGSS~~nl~~~v~~~~ 448 (448)
T PLN02562 425 ERAMGE-EARLRSMMNFTTLKDELK 448 (448)
T ss_pred HHHHhc-CCCCCHHHHHHHHHHHhC
Confidence 999887 678999999999999875
No 16
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=2.9e-64 Score=492.42 Aligned_cols=305 Identities=27% Similarity=0.457 Sum_probs=252.6
Q ss_pred CcCcceeEechhhHHHHHHHHHhhcCCCCCCCCCCceecCCCCC----CCCCCCCcccc--CCCCchhHHHHHHHHHhcc
Q 038830 1 KFGLIGAAFLTQSCAVAGIYHHMNKGLIKLPLTGDQVLVPGLRP----LDPQDTPSFIN--DSASYPAFFDMIITRQFSN 74 (335)
Q Consensus 1 ~~gip~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~----~~~~dlp~~~~--~~~~~~~~~~~~~~~~~~~ 74 (335)
++|||+++|||++|+.++++++ +.+.+ ...+||+|. ++.+|+|.+.. .....+.+..+.. +..+.
T Consensus 126 ~~gIP~~~f~~~~a~~~~~~~~-~~~~~-------~~~~pglp~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~ 196 (453)
T PLN02764 126 DFGLKTVKYVVVSASTIASMLV-PGGEL-------GVPPPGYPSSKVLLRKQDAYTMKNLEPTNTIDVGPNLLE-RVTTS 196 (453)
T ss_pred HhCCCEEEEEcHHHHHHHHHhc-ccccC-------CCCCCCCCCCcccCcHhhCcchhhcCCCccchhHHHHHH-HHHHh
Confidence 5899999999999999998863 22211 123599983 78899997532 1122222323333 44366
Q ss_pred cccccEEEEcChHHhhHHHHHHHhcc--CCcceeccCCCCcccccccccccccCccCCCCChhhHHHHhhcCCCCcEEEE
Q 038830 75 IDKADWILCNTFYELEKEVTEWLGKH--WLLRTIGPTLPSIYLDKQIEDDKEYGFSIFEPDIESSMKWLNDRANGSVVYV 152 (335)
Q Consensus 75 ~~~~~~vl~nsf~elE~~~~~~~~~~--~~v~~vGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyv 152 (335)
..++++||+|||+|||+++++++++. .|+|+||||++.. . .. ...+++|++|||+|+++|||||
T Consensus 197 ~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~~~--~----~~--------~~~~~~cl~WLD~q~~~sVvyv 262 (453)
T PLN02764 197 LMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVFPEP--D----KT--------RELEERWVKWLSGYEPDSVVFC 262 (453)
T ss_pred hccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccCccCc--c----cc--------ccchhHHHHHHhCCCCCceEEE
Confidence 77899999999999999999999875 3599999997531 0 00 0125679999999999999999
Q ss_pred EeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCC-----CCcCCccchhhcCCceEEE-eecchhhhccccCcCeEEcc
Q 038830 153 SFGSMATLKIEEMEELPCGLKASDKYFLWVVRESE-----QSKLPENFSDETSQKGLVV-NWCPQLGVLAHEATGCFLTH 226 (335)
Q Consensus 153 sfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~-----~~~l~~~~~~~~~~~~~v~-~w~pq~~vL~h~~v~~fItH 226 (335)
||||+..++.+|+.+++.+|+.++.+|+|+++... ...+|++|++|++++|+++ +|+||.+||+|+++++||||
T Consensus 263 sfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH 342 (453)
T PLN02764 263 ALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSH 342 (453)
T ss_pred eecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEec
Confidence 99999999999999999999999999999999531 2368999999999999888 89999999999999999999
Q ss_pred CCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcC--CcHHHHHHHHHHH
Q 038830 227 CGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEG--KRDKEIKQNADKW 304 (335)
Q Consensus 227 gG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~r~~a~~l 304 (335)
|||||++||+++|||||+||+++||+.||+++++.||+|+.+..++.+.+++++|+++|+++|++ ++|+++|+|++++
T Consensus 343 ~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~ 422 (453)
T PLN02764 343 CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKW 422 (453)
T ss_pred CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 99999999999999999999999999999999888899999854322368999999999999976 4578899999999
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHhhc
Q 038830 305 RNFAKEAVAKGGSSDKNIDDFVANLISS 332 (335)
Q Consensus 305 ~~~~~~a~~~ggss~~~l~~~v~~~~~~ 332 (335)
+++++ +||||++++++||+++++.
T Consensus 423 ~~~~~----~~GSS~~~l~~lv~~~~~~ 446 (453)
T PLN02764 423 RETLA----SPGLLTGYVDNFIESLQDL 446 (453)
T ss_pred HHHHH----hcCCHHHHHHHHHHHHHHh
Confidence 99985 5799999999999999875
No 17
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=1.1e-62 Score=482.45 Aligned_cols=301 Identities=23% Similarity=0.444 Sum_probs=249.5
Q ss_pred CcCcceeEechhhHHHHHHHHHhhcCCCCCCCCCCceecCCCCC----CCCCCCCccccCCCCchhHHHHHHHHHh-ccc
Q 038830 1 KFGLIGAAFLTQSCAVAGIYHHMNKGLIKLPLTGDQVLVPGLRP----LDPQDTPSFINDSASYPAFFDMIITRQF-SNI 75 (335)
Q Consensus 1 ~~gip~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~----~~~~dlp~~~~~~~~~~~~~~~~~~~~~-~~~ 75 (335)
++|||+++|||++|++++ ++|++.+.. ...+||+|. ++.+|+|.+. ..+..++.+. +.+ +..
T Consensus 125 e~giP~~~f~~~~a~~~~-~~~~~~~~~-------~~~~pglp~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~ 191 (442)
T PLN02208 125 EHMIKSVSYIIVSATTIA-HTHVPGGKL-------GVPPPGYPSSKVLFRENDAHALA----TLSIFYKRLY-HQITTGL 191 (442)
T ss_pred HhCCCEEEEEhhhHHHHH-HHccCcccc-------CCCCCCCCCcccccCHHHcCccc----ccchHHHHHH-HHHHhhh
Confidence 589999999999998765 555543211 123699985 6788999751 1223334444 333 456
Q ss_pred ccccEEEEcChHHhhHHHHHHHhccC--CcceeccCCCCcccccccccccccCccCCCCChhhHHHHhhcCCCCcEEEEE
Q 038830 76 DKADWILCNTFYELEKEVTEWLGKHW--LLRTIGPTLPSIYLDKQIEDDKEYGFSIFEPDIESSMKWLNDRANGSVVYVS 153 (335)
Q Consensus 76 ~~~~~vl~nsf~elE~~~~~~~~~~~--~v~~vGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvs 153 (335)
.+++++|+|||+|||+++++++++.+ ++++|||+++.. +.. ++++++|.+|||.++++||||||
T Consensus 192 ~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~--------~~~------~~~~~~~~~wLd~~~~~sVvyvS 257 (442)
T PLN02208 192 KSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEP--------DTS------KPLEEQWSHFLSGFPPKSVVFCS 257 (442)
T ss_pred ccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCc--------CCC------CCCHHHHHHHHhcCCCCcEEEEe
Confidence 78999999999999999999998754 499999997531 000 12367899999999999999999
Q ss_pred eCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCC-----CCcCCccchhhcCCceEEE-eecchhhhccccCcCeEEccC
Q 038830 154 FGSMATLKIEEMEELPCGLKASDKYFLWVVRESE-----QSKLPENFSDETSQKGLVV-NWCPQLGVLAHEATGCFLTHC 227 (335)
Q Consensus 154 fGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~-----~~~l~~~~~~~~~~~~~v~-~w~pq~~vL~h~~v~~fItHg 227 (335)
|||+..++.+|+.+++.+|+.++.+|+|+++... ...+|++|.+|+.++++++ +|+||.+||+|+++|+|||||
T Consensus 258 fGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHc 337 (442)
T PLN02208 258 LGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHC 337 (442)
T ss_pred ccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCcccchhhhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccC
Confidence 9999999999999999999999999999999541 2358999999998888777 899999999999999999999
Q ss_pred CcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC--cHHHHHHHHHHHH
Q 038830 228 GWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK--RDKEIKQNADKWR 305 (335)
Q Consensus 228 G~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~r~~a~~l~ 305 (335)
||||++||+++|||||+||+++||+.||+++++.||+|+.+..++++.+++++|+++|+++|+++ +|+++|+|+++++
T Consensus 338 G~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~ 417 (442)
T PLN02208 338 GPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLK 417 (442)
T ss_pred CchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988999999754334599999999999999764 4889999999999
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHhhc
Q 038830 306 NFAKEAVAKGGSSDKNIDDFVANLISS 332 (335)
Q Consensus 306 ~~~~~a~~~ggss~~~l~~~v~~~~~~ 332 (335)
+.+. .+|||++|+++||+++++.
T Consensus 418 ~~~~----~~gsS~~~l~~~v~~l~~~ 440 (442)
T PLN02208 418 EILV----SPGLLTGYVDKFVEELQEY 440 (442)
T ss_pred HHHh----cCCcHHHHHHHHHHHHHHh
Confidence 9873 3689999999999999753
No 18
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=4.2e-62 Score=478.78 Aligned_cols=301 Identities=24% Similarity=0.415 Sum_probs=245.3
Q ss_pred CcCcceeEechhhHHHHHHHHHhhcCCCCCCCCCCceecCCCCC----CCCCCC--CccccCCCCchhHHHHHHHHHhcc
Q 038830 1 KFGLIGAAFLTQSCAVAGIYHHMNKGLIKLPLTGDQVLVPGLRP----LDPQDT--PSFINDSASYPAFFDMIITRQFSN 74 (335)
Q Consensus 1 ~~gip~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~----~~~~dl--p~~~~~~~~~~~~~~~~~~~~~~~ 74 (335)
++|||+++|||++|+++++++|.... . ...+||+|. ++.+|+ |.++.. . ...+. +.++.
T Consensus 125 ~lgIP~~~F~~~~a~~~~~~~~~~~~-------~-~~~~pg~p~~~~~~~~~~~~~~~~~~~---~---~~~~~-~~~~~ 189 (446)
T PLN00414 125 EFGIKSVNYQIISAACVAMVLAPRAE-------L-GFPPPDYPLSKVALRGHDANVCSLFAN---S---HELFG-LITKG 189 (446)
T ss_pred HhCCCEEEEecHHHHHHHHHhCcHhh-------c-CCCCCCCCCCcCcCchhhcccchhhcc---c---HHHHH-HHHHh
Confidence 58999999999999999988763210 0 123588874 444543 344321 1 12333 45566
Q ss_pred cccccEEEEcChHHhhHHHHHHHhccC--CcceeccCCCCcccccccccccccCccCCCCChhhHHHHhhcCCCCcEEEE
Q 038830 75 IDKADWILCNTFYELEKEVTEWLGKHW--LLRTIGPTLPSIYLDKQIEDDKEYGFSIFEPDIESSMKWLNDRANGSVVYV 152 (335)
Q Consensus 75 ~~~~~~vl~nsf~elE~~~~~~~~~~~--~v~~vGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyv 152 (335)
..+++++|+|||+|||+++++++++.. |||+|||+++.. .. .+ + ...+++|++|||+|+++|||||
T Consensus 190 ~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~----~~-~~---~----~~~~~~~~~WLD~q~~~sVvyv 257 (446)
T PLN00414 190 LKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEP----QN-KS---G----KPLEDRWNHWLNGFEPGSVVFC 257 (446)
T ss_pred hccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCCc----cc-cc---C----cccHHHHHHHHhcCCCCceEEE
Confidence 778999999999999999999998753 599999997531 00 00 0 1124679999999999999999
Q ss_pred EeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCC-----CCcCCccchhhcCCceEEE-eecchhhhccccCcCeEEcc
Q 038830 153 SFGSMATLKIEEMEELPCGLKASDKYFLWVVRESE-----QSKLPENFSDETSQKGLVV-NWCPQLGVLAHEATGCFLTH 226 (335)
Q Consensus 153 sfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~-----~~~l~~~~~~~~~~~~~v~-~w~pq~~vL~h~~v~~fItH 226 (335)
||||...++.+|+.+++.+|+.+|.+|+|+++... ...+|++|++|++++|+++ +|+||.+||+|+++|+||||
T Consensus 258 sfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH 337 (446)
T PLN00414 258 AFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNH 337 (446)
T ss_pred eecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEec
Confidence 99999999999999999999999999999998631 2368999999999999998 89999999999999999999
Q ss_pred CCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcC--CcHHHHHHHHHHH
Q 038830 227 CGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEG--KRDKEIKQNADKW 304 (335)
Q Consensus 227 gG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~r~~a~~l 304 (335)
|||||++||+++|||||+||+++||+.||+++++.||+|+.+..++++.+++++|+++|+++|.+ ++|++||++|+++
T Consensus 338 ~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~ 417 (446)
T PLN00414 338 CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKL 417 (446)
T ss_pred CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999988899999965322368999999999999975 4578899999999
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHhhc
Q 038830 305 RNFAKEAVAKGGSSDKNIDDFVANLISS 332 (335)
Q Consensus 305 ~~~~~~a~~~ggss~~~l~~~v~~~~~~ 332 (335)
++.+ +++|||| ..+++||+++++.
T Consensus 418 ~~~~---~~~gg~s-s~l~~~v~~~~~~ 441 (446)
T PLN00414 418 KETL---VSPGLLS-GYADKFVEALENE 441 (446)
T ss_pred HHHH---HcCCCcH-HHHHHHHHHHHHh
Confidence 9986 4677734 3389999999764
No 19
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=2.3e-61 Score=479.49 Aligned_cols=322 Identities=31% Similarity=0.514 Sum_probs=258.9
Q ss_pred CcCcceeEechhhHHHHHHHHHhhcCCCC---CCCCCCceecCCCCC---CCCCCCCccccCCCCchhHHHHHHHHHhcc
Q 038830 1 KFGLIGAAFLTQSCAVAGIYHHMNKGLIK---LPLTGDQVLVPGLRP---LDPQDTPSFINDSASYPAFFDMIITRQFSN 74 (335)
Q Consensus 1 ~~gip~~~f~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~pg~~~---~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~ 74 (335)
++|||+++|||++|+.+++++++... .+ ...++..+.+||+|+ ++..++|.. +....+.+++. ...+.
T Consensus 141 ~lgIP~v~f~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~pg~p~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~ 214 (482)
T PLN03007 141 KFGVPRLVFHGTGYFSLCASYCIRVH-KPQKKVASSSEPFVIPDLPGDIVITEEQINDA----DEESPMGKFMK-EVRES 214 (482)
T ss_pred HhCCCeEEeecccHHHHHHHHHHHhc-ccccccCCCCceeeCCCCCCccccCHHhcCCC----CCchhHHHHHH-HHHhh
Confidence 58999999999999998888766421 12 112223456899983 566777752 12233444554 55556
Q ss_pred cccccEEEEcChHHhhHHHHHHHhccC--CcceeccCCCCcccccccccccccCccCCCCChhhHHHHhhcCCCCcEEEE
Q 038830 75 IDKADWILCNTFYELEKEVTEWLGKHW--LLRTIGPTLPSIYLDKQIEDDKEYGFSIFEPDIESSMKWLNDRANGSVVYV 152 (335)
Q Consensus 75 ~~~~~~vl~nsf~elE~~~~~~~~~~~--~v~~vGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyv 152 (335)
..+++++++|||++||.++++++++.. ++++|||+.+... .....+ ..+...+. .+++|.+|||+++++|||||
T Consensus 215 ~~~~~~vl~Nt~~~le~~~~~~~~~~~~~~~~~VGPl~~~~~--~~~~~~-~~~~~~~~-~~~~~~~wLd~~~~~svvyv 290 (482)
T PLN03007 215 EVKSFGVLVNSFYELESAYADFYKSFVAKRAWHIGPLSLYNR--GFEEKA-ERGKKANI-DEQECLKWLDSKKPDSVIYL 290 (482)
T ss_pred cccCCEEEEECHHHHHHHHHHHHHhccCCCEEEEcccccccc--cccccc-ccCCcccc-chhHHHHHHhcCCCCceEEE
Confidence 778999999999999999999998653 6999999865310 000000 00111111 25779999999999999999
Q ss_pred EeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCC-----CCcCCccchhhcCCceEEE-eecchhhhccccCcCeEEcc
Q 038830 153 SFGSMATLKIEEMEELPCGLKASDKYFLWVVRESE-----QSKLPENFSDETSQKGLVV-NWCPQLGVLAHEATGCFLTH 226 (335)
Q Consensus 153 sfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~-----~~~l~~~~~~~~~~~~~v~-~w~pq~~vL~h~~v~~fItH 226 (335)
||||+...+.+++.+++.+|+.++++|||+++... ...+|++|.+|+.+++.++ +|+||.+||+|+++|+||||
T Consensus 291 sfGS~~~~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH 370 (482)
T PLN03007 291 SFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTH 370 (482)
T ss_pred eecCCcCCCHHHHHHHHHHHHHCCCCEEEEEecCCcccchhhcCCHHHHHHhccCCEEEecCCCHHHHhccCccceeeec
Confidence 99999999999999999999999999999999632 1258889999987777665 89999999999999999999
Q ss_pred CCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCC-----CCCCcCHHHHHHHHHHHHcCCcHHHHHHHH
Q 038830 227 CGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPAD-----EKGIVRREAIAHCISEILEGKRDKEIKQNA 301 (335)
Q Consensus 227 gG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~-----~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a 301 (335)
|||||++||+++|||||+||+++||+.||+++++.|++|+.+... +.+.+++++|.++|+++|.+++|++||+||
T Consensus 371 ~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a 450 (482)
T PLN03007 371 CGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRA 450 (482)
T ss_pred CcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 999999999999999999999999999999999988888887421 123689999999999999988899999999
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHhhc
Q 038830 302 DKWRNFAKEAVAKGGSSDKNIDDFVANLISS 332 (335)
Q Consensus 302 ~~l~~~~~~a~~~ggss~~~l~~~v~~~~~~ 332 (335)
+++++.+++|+.+||||++|+++||+++++.
T Consensus 451 ~~~~~~a~~a~~~gGsS~~~l~~~v~~~~~~ 481 (482)
T PLN03007 451 KKLAEMAKAAVEEGGSSFNDLNKFMEELNSR 481 (482)
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999864
No 20
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=1.6e-61 Score=476.17 Aligned_cols=317 Identities=26% Similarity=0.486 Sum_probs=252.0
Q ss_pred CcCcceeEechhhHHHHHHHHHhh----cCCCCCCCCCCce-ecCCC-C-----CCCCCCCCccccCCCCchhHHHHHHH
Q 038830 1 KFGLIGAAFLTQSCAVAGIYHHMN----KGLIKLPLTGDQV-LVPGL-R-----PLDPQDTPSFINDSASYPAFFDMIIT 69 (335)
Q Consensus 1 ~~gip~~~f~~~~a~~~~~~~~~~----~~~~~~~~~~~~~-~~pg~-~-----~~~~~dlp~~~~~~~~~~~~~~~~~~ 69 (335)
++|||+++|||++|++++++++.. .+..+ ..++.+ .+||+ | .++.+|+|+++............+.
T Consensus 129 ~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~- 205 (472)
T PLN02670 129 ELGISKAFFSLFTAATLSFIGPPSSLMEGGDLR--STAEDFTVVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSV- 205 (472)
T ss_pred HcCCCEEEEehhhHHHHHHHhhhHhhhhcccCC--CccccccCCCCcCCCCccccccHHHhhHHHhccCccchHHHHHH-
Confidence 589999999999999999887553 23222 212222 35664 2 2567899987753322222233344
Q ss_pred HHhcccccccEEEEcChHHhhHHHHHHHhccC--CcceeccCCCCcccccccccccccCccCCCCChhhHHHHhhcCCCC
Q 038830 70 RQFSNIDKADWILCNTFYELEKEVTEWLGKHW--LLRTIGPTLPSIYLDKQIEDDKEYGFSIFEPDIESSMKWLNDRANG 147 (335)
Q Consensus 70 ~~~~~~~~~~~vl~nsf~elE~~~~~~~~~~~--~v~~vGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~ 147 (335)
+.+....+++++|+|||+|||+++++++++.. |+|+||||++... ... .+.. ... ...++|.+|||+++++
T Consensus 206 ~~~~~~~~~~gvlvNTf~eLE~~~l~~l~~~~~~~v~~VGPl~~~~~--~~~-~~~~--~~~--~~~~~~~~wLd~~~~~ 278 (472)
T PLN02670 206 RFGFAIGGSDVVIIRSSPEFEPEWFDLLSDLYRKPIIPIGFLPPVIE--DDE-EDDT--IDV--KGWVRIKEWLDKQRVN 278 (472)
T ss_pred HHHhhcccCCEEEEeCHHHHhHHHHHHHHHhhCCCeEEEecCCcccc--ccc-cccc--ccc--chhHHHHHHHhcCCCC
Confidence 55556778999999999999999999998753 6999999976310 000 0000 000 0125799999999999
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCC------CCcCCccchhhcCCceEEE-eecchhhhccccCc
Q 038830 148 SVVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESE------QSKLPENFSDETSQKGLVV-NWCPQLGVLAHEAT 220 (335)
Q Consensus 148 svvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~------~~~l~~~~~~~~~~~~~v~-~w~pq~~vL~h~~v 220 (335)
|||||||||+..++.+|+.+++.+|+.++++|||+++... ...+|++|.+|++++|+++ +|+||.+||+|+++
T Consensus 279 sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v 358 (472)
T PLN02670 279 SVVYVALGTEASLRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESV 358 (472)
T ss_pred ceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCCHHHHhcCccc
Confidence 9999999999999999999999999999999999998521 1358999999999999887 89999999999999
Q ss_pred CeEEccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCC-CCCcCHHHHHHHHHHHHcCCcHHHHHH
Q 038830 221 GCFLTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADE-KGIVRREAIAHCISEILEGKRDKEIKQ 299 (335)
Q Consensus 221 ~~fItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~-~~~~~~~~l~~~i~~ll~~~~~~~~r~ 299 (335)
|+|||||||||++||+++|||||+||+++||+.||+++++ ||+|+.+...+ ++.+++++|+++|+++|.+++|++||+
T Consensus 359 ~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~-~g~Gv~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~ 437 (472)
T PLN02670 359 GGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHG-KKLGLEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRD 437 (472)
T ss_pred ceeeecCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHH-cCeeEEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHH
Confidence 9999999999999999999999999999999999999976 59999996432 246899999999999998888899999
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHHHhhc
Q 038830 300 NADKWRNFAKEAVAKGGSSDKNIDDFVANLISS 332 (335)
Q Consensus 300 ~a~~l~~~~~~a~~~ggss~~~l~~~v~~~~~~ 332 (335)
||+++++.+++. +.-....++|++.+++.
T Consensus 438 ~a~~l~~~~~~~----~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 438 KAKEMRNLFGDM----DRNNRYVDELVHYLREN 466 (472)
T ss_pred HHHHHHHHHhCc----chhHHHHHHHHHHHHHh
Confidence 999999998853 55667888888888764
No 21
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1e-60 Score=472.35 Aligned_cols=318 Identities=34% Similarity=0.651 Sum_probs=260.5
Q ss_pred CcCcceeEechhhHHHHHHHHHhhc----CCCCCCC---CCCce-ecCCCCCCCCCCCCccccCCCCchhHHHHHHHHHh
Q 038830 1 KFGLIGAAFLTQSCAVAGIYHHMNK----GLIKLPL---TGDQV-LVPGLRPLDPQDTPSFINDSASYPAFFDMIITRQF 72 (335)
Q Consensus 1 ~~gip~~~f~~~~a~~~~~~~~~~~----~~~~~~~---~~~~~-~~pg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~ 72 (335)
++|||+++||+++|++++++++++. +..+... .+..+ .+||+|+++.+|+|.++.+. .....+.++ +.+
T Consensus 127 ~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~l~~~dlp~~~~~~--~~~~~~~~~-~~~ 203 (459)
T PLN02448 127 RRNIPVASLWTMSATFFSVFYHFDLLPQNGHFPVELSESGEERVDYIPGLSSTRLSDLPPIFHGN--SRRVLKRIL-EAF 203 (459)
T ss_pred HhCCCeEEEEhHHHHHHHHHHHhhhhhhccCCCCccccccCCccccCCCCCCCChHHCchhhcCC--chHHHHHHH-HHH
Confidence 5899999999999999998887752 2222221 12223 48999999999999876542 223455666 777
Q ss_pred cccccccEEEEcChHHhhHHHHHHHhccC--CcceeccCCCCcccccccccccccCccCCCCChhhHHHHhhcCCCCcEE
Q 038830 73 SNIDKADWILCNTFYELEKEVTEWLGKHW--LLRTIGPTLPSIYLDKQIEDDKEYGFSIFEPDIESSMKWLNDRANGSVV 150 (335)
Q Consensus 73 ~~~~~~~~vl~nsf~elE~~~~~~~~~~~--~v~~vGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svv 150 (335)
....++++|++|||+|||+++++++++.+ |+++|||+.+.....+ . ..+.. ....+.+|.+||+.++++|||
T Consensus 204 ~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~iGP~~~~~~~~~----~-~~~~~-~~~~~~~~~~wl~~~~~~~vv 277 (459)
T PLN02448 204 SWVPKAQYLLFTSFYELEAQAIDALKSKFPFPVYPIGPSIPYMELKD----N-SSSSN-NEDNEPDYFQWLDSQPEGSVL 277 (459)
T ss_pred hhcccCCEEEEccHHHhhHHHHHHHHhhcCCceEEecCcccccccCC----C-ccccc-cccchhHHHHHHcCCCCCceE
Confidence 77788999999999999999999998764 6999999976421100 0 00000 011135799999999999999
Q ss_pred EEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchhhhccccCcCeEEccCCcc
Q 038830 151 YVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWN 230 (335)
Q Consensus 151 yvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~v~~fItHgG~n 230 (335)
||||||....+.+++.+++.+|+.++++|||+++.. ..++.++.++|+++++|+||.+||+|+++++||||||||
T Consensus 278 yvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~-----~~~~~~~~~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~n 352 (459)
T PLN02448 278 YVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGE-----ASRLKEICGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWN 352 (459)
T ss_pred EEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCc-----hhhHhHhccCCEEEeccCCHHHHhccCccceEEecCchh
Confidence 999999998889999999999999999999998743 124555566789999999999999999999999999999
Q ss_pred hHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCC--CCCCcCHHHHHHHHHHHHcC--CcHHHHHHHHHHHHH
Q 038830 231 STLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPAD--EKGIVRREAIAHCISEILEG--KRDKEIKQNADKWRN 306 (335)
Q Consensus 231 Sv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~--~~~~~~~~~l~~~i~~ll~~--~~~~~~r~~a~~l~~ 306 (335)
|++||+++|||||+||+++||+.||+++++.||+|+.+... +++.+++++|+++|+++|.+ ++|++||+||++|++
T Consensus 353 S~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~ 432 (459)
T PLN02448 353 STLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQE 432 (459)
T ss_pred HHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998632 12368999999999999975 468899999999999
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHhhc
Q 038830 307 FAKEAVAKGGSSDKNIDDFVANLISS 332 (335)
Q Consensus 307 ~~~~a~~~ggss~~~l~~~v~~~~~~ 332 (335)
++++|+.+||||++||++||+++++.
T Consensus 433 ~~~~a~~~gGss~~~l~~~v~~~~~~ 458 (459)
T PLN02448 433 ICRGAIAKGGSSDTNLDAFIRDISQG 458 (459)
T ss_pred HHHHHhcCCCcHHHHHHHHHHHHhcc
Confidence 99999999999999999999999864
No 22
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=7.1e-39 Score=319.59 Aligned_cols=283 Identities=28% Similarity=0.402 Sum_probs=198.1
Q ss_pred CcceeEechhhHHHHHHHHHhhcCCCCCCCCC---CceecCCCC-CCCCCCCCccccCCCCchhHHHHHHHHHhccc---
Q 038830 3 GLIGAAFLTQSCAVAGIYHHMNKGLIKLPLTG---DQVLVPGLR-PLDPQDTPSFINDSASYPAFFDMIITRQFSNI--- 75 (335)
Q Consensus 3 gip~~~f~~~~a~~~~~~~~~~~~~~~~~~~~---~~~~~pg~~-~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~--- 75 (335)
+||..+|++.++...++..+.+..++|..... ....+++.. .+...++|.+............... ......
T Consensus 136 ~i~~~~~~~~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 214 (496)
T KOG1192|consen 136 VIPLLSFPTSSAVLLALGLPSPLSYVPSPFSLSSGDDMSFPERVPNLIKKDLPSFLFSLSDDRKQDKISK-ELLGDILNW 214 (496)
T ss_pred EEEeecccCchHHHHhcCCcCcccccCcccCccccccCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH-HhCCCcccc
Confidence 48889999999887777766554444422110 112233332 2344444443221110000001111 111111
Q ss_pred -ccccEEEEcC-hHHhhHHHHHHHhcc---CCcceeccCCCCcccccccccccccCccCCCCChhhHHHHhhcCCCC--c
Q 038830 76 -DKADWILCNT-FYELEKEVTEWLGKH---WLLRTIGPTLPSIYLDKQIEDDKEYGFSIFEPDIESSMKWLNDRANG--S 148 (335)
Q Consensus 76 -~~~~~vl~ns-f~elE~~~~~~~~~~---~~v~~vGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~--s 148 (335)
..++.++.|+ |..+|......++.. .++++|||+.... . +.....+++|++..+.. +
T Consensus 215 ~~~~~~i~~~~~~~~ln~~~~~~~~~~~~~~~v~~IG~l~~~~--------~--------~~~~~~~~~wl~~~~~~~~~ 278 (496)
T KOG1192|consen 215 KPTASGIIVNASFIFLNSNPLLDFEPRPLLPKVIPIGPLHVKD--------S--------KQKSPLPLEWLDILDESRHS 278 (496)
T ss_pred cccHHHhhhcCeEEEEccCcccCCCCCCCCCCceEECcEEecC--------c--------cccccccHHHHHHHhhccCC
Confidence 2344566666 777777665445332 2499999997641 0 00012588999988776 9
Q ss_pred EEEEEeCCcc---cCCHHHHHHHHHHHhhC-CCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchhhh-ccccCcCeE
Q 038830 149 VVYVSFGSMA---TLKIEEMEELPCGLKAS-DKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGV-LAHEATGCF 223 (335)
Q Consensus 149 vvyvsfGS~~---~~~~~~~~~l~~~l~~~-~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~v-L~h~~v~~f 223 (335)
||||||||++ .++.+++.+++.+|+.+ +++|||+++......+++++.++-++|+...+|+||.++ |+|+++|+|
T Consensus 279 vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~~~~~~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~F 358 (496)
T KOG1192|consen 279 VVYISFGSMVNSADLPEEQKKELAKALESLQGVTFLWKYRPDDSIYFPEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGF 358 (496)
T ss_pred eEEEECCcccccccCCHHHHHHHHHHHHhCCCceEEEEecCCcchhhhhcCCCCCcCceEEecCCCcHHHhcCCCcCcEE
Confidence 9999999999 79999999999999999 899999999754333455554442345666689999998 699999999
Q ss_pred EccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCCcHHHHHHHHHH
Q 038830 224 LTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGKRDKEIKQNADK 303 (335)
Q Consensus 224 ItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~ 303 (335)
|||||||||+|++++|||||+||+++||+.||+++++.|++++....+ ++.+++.+++.++++++ +|++++++
T Consensus 359 vTHgG~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~----~~~~~~~~~~~~il~~~---~y~~~~~~ 431 (496)
T KOG1192|consen 359 VTHGGWNSTLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRD----LVSEELLEAIKEILENE---EYKEAAKR 431 (496)
T ss_pred EECCcccHHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhh----cCcHHHHHHHHHHHcCh---HHHHHHHH
Confidence 999999999999999999999999999999999999997777777654 45555999999999988 89999999
Q ss_pred HHHHHH
Q 038830 304 WRNFAK 309 (335)
Q Consensus 304 l~~~~~ 309 (335)
+++..+
T Consensus 432 l~~~~~ 437 (496)
T KOG1192|consen 432 LSEILR 437 (496)
T ss_pred HHHHHH
Confidence 999876
No 23
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=2.1e-38 Score=316.90 Aligned_cols=168 Identities=31% Similarity=0.525 Sum_probs=137.3
Q ss_pred CCChhhHHHHhhcCCCCcEEEEEeCCccc-CCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeec
Q 038830 131 EPDIESSMKWLNDRANGSVVYVSFGSMAT-LKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWC 209 (335)
Q Consensus 131 ~~~~~~~~~wLd~~~~~svvyvsfGS~~~-~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~ 209 (335)
++++.++..|++...+++||||||||+.. ++.+.++++++++++.+++|||+++..... .+++|.++++|+
T Consensus 260 ~~l~~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~~~~--------~l~~n~~~~~W~ 331 (500)
T PF00201_consen 260 KPLPEELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEAFENLPQRFIWKYEGEPPE--------NLPKNVLIVKWL 331 (500)
T ss_dssp -TCHHHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHHHHCSTTEEEEEETCSHGC--------HHHTTEEEESS-
T ss_pred cccccccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHHHhhCCCcccccccccccc--------cccceEEEeccc
Confidence 34578889999975678999999999975 444458899999999999999999763211 245678999999
Q ss_pred chhhhccccCcCeEEccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHH
Q 038830 210 PQLGVLAHEATGCFLTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEIL 289 (335)
Q Consensus 210 pq~~vL~h~~v~~fItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll 289 (335)
||.+||+||++++|||||||||++||+++|||||++|+++||+.||+++++. |+|+.++.. .++.+++.++|+++|
T Consensus 332 PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~-G~g~~l~~~---~~~~~~l~~ai~~vl 407 (500)
T PF00201_consen 332 PQNDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEK-GVGVVLDKN---DLTEEELRAAIREVL 407 (500)
T ss_dssp -HHHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHT-TSEEEEGGG---C-SHHHHHHHHHHHH
T ss_pred cchhhhhcccceeeeeccccchhhhhhhccCCccCCCCcccCCccceEEEEE-eeEEEEEec---CCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 999999876 689999999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHh
Q 038830 290 EGKRDKEIKQNADKWRNFAKEAVA 313 (335)
Q Consensus 290 ~~~~~~~~r~~a~~l~~~~~~a~~ 313 (335)
+|+ +|++||+++++.+++...
T Consensus 408 ~~~---~y~~~a~~ls~~~~~~p~ 428 (500)
T PF00201_consen 408 ENP---SYKENAKRLSSLFRDRPI 428 (500)
T ss_dssp HSH---HHHHHHHHHHHTTT----
T ss_pred hhh---HHHHHHHHHHHHHhcCCC
Confidence 998 999999999999987543
No 24
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=5.3e-35 Score=291.78 Aligned_cols=201 Identities=23% Similarity=0.327 Sum_probs=170.7
Q ss_pred ccccEEEEcChHHhhHHHHHHHhccCC-cceeccCCCCcccccccccccccCccCCCCChhhHHHHhhcCCCCcEEEEEe
Q 038830 76 DKADWILCNTFYELEKEVTEWLGKHWL-LRTIGPTLPSIYLDKQIEDDKEYGFSIFEPDIESSMKWLNDRANGSVVYVSF 154 (335)
Q Consensus 76 ~~~~~vl~nsf~elE~~~~~~~~~~~~-v~~vGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsf 154 (335)
++++.+|+||.+.+|.+ +...| +..|||+.... . ..++.++++.+|++.. ++++|||||
T Consensus 244 ~~~~l~lvns~~~~d~~-----rp~~p~v~~vGgi~~~~--------~------~~~~l~~~l~~fl~~~-~~g~V~vS~ 303 (507)
T PHA03392 244 NRVQLLFVNVHPVFDNN-----RPVPPSVQYLGGLHLHK--------K------PPQPLDDYLEEFLNNS-TNGVVYVSF 303 (507)
T ss_pred hCCcEEEEecCccccCC-----CCCCCCeeeecccccCC--------C------CCCCCCHHHHHHHhcC-CCcEEEEEC
Confidence 35689999999999963 33334 88999986420 0 0123578899999975 457999999
Q ss_pred CCccc---CCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchhhhccccCcCeEEccCCcch
Q 038830 155 GSMAT---LKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNS 231 (335)
Q Consensus 155 GS~~~---~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~v~~fItHgG~nS 231 (335)
||... ++.+.++.++++++..+++|||+++.... + ...++|+++.+|+||.+||+||.+++||||||+||
T Consensus 304 GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~~---~----~~~p~Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~s 376 (507)
T PHA03392 304 GSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEVE---A----INLPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQS 376 (507)
T ss_pred CCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCCcC---c----ccCCCceEEecCCCHHHHhcCCCCCEEEecCCccc
Confidence 99863 56788999999999999999999875321 1 12467889999999999999999999999999999
Q ss_pred HHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Q 038830 232 TLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGKRDKEIKQNADKWRNFAKE 310 (335)
Q Consensus 232 v~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~ 310 (335)
++||+++|||||++|+++||+.||+++++. |+|+.++.. .++.++|.++|+++++++ +||+||+++++.+++
T Consensus 377 ~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~-G~G~~l~~~---~~t~~~l~~ai~~vl~~~---~y~~~a~~ls~~~~~ 448 (507)
T PHA03392 377 TDEAIDALVPMVGLPMMGDQFYNTNKYVEL-GIGRALDTV---TVSAAQLVLAIVDVIENP---KYRKNLKELRHLIRH 448 (507)
T ss_pred HHHHHHcCCCEEECCCCccHHHHHHHHHHc-CcEEEeccC---CcCHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHh
Confidence 999999999999999999999999999998 999999876 689999999999999988 999999999999986
No 25
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=99.93 E-value=2.3e-25 Score=216.31 Aligned_cols=158 Identities=26% Similarity=0.398 Sum_probs=136.4
Q ss_pred HhhcCCCCcEEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchhhhccccC
Q 038830 140 WLNDRANGSVVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEA 219 (335)
Q Consensus 140 wLd~~~~~svvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~ 219 (335)
|++..+++++|||+|||+.......+.++++++...+.+++|..+..... +.+ ...++|+.+.+|+||.++|+|++
T Consensus 218 ~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~~~---~~~-~~~~~~v~~~~~~p~~~ll~~~~ 293 (392)
T TIGR01426 218 WERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGVDP---ADL-GELPPNVEVRQWVPQLEILKKAD 293 (392)
T ss_pred CCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCCCh---hHh-ccCCCCeEEeCCCCHHHHHhhCC
Confidence 77666778999999999876666678889999999999999988653211 111 12456788889999999999999
Q ss_pred cCeEEccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCCcHHHHHH
Q 038830 220 TGCFLTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGKRDKEIKQ 299 (335)
Q Consensus 220 v~~fItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~ 299 (335)
+ ||||||+||++||+++|+|+|++|...||+.||+++++. |+|+.+... .++.++|.++|+++|+++ +|++
T Consensus 294 ~--~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~-g~g~~l~~~---~~~~~~l~~ai~~~l~~~---~~~~ 364 (392)
T TIGR01426 294 A--FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAEL-GLGRHLPPE---EVTAEKLREAVLAVLSDP---RYAE 364 (392)
T ss_pred E--EEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHHHHC-CCEEEeccc---cCCHHHHHHHHHHHhcCH---HHHH
Confidence 8 999999999999999999999999999999999999998 999998765 689999999999999987 8999
Q ss_pred HHHHHHHHHHH
Q 038830 300 NADKWRNFAKE 310 (335)
Q Consensus 300 ~a~~l~~~~~~ 310 (335)
+++++++.++.
T Consensus 365 ~~~~l~~~~~~ 375 (392)
T TIGR01426 365 RLRKMRAEIRE 375 (392)
T ss_pred HHHHHHHHHHH
Confidence 99999999874
No 26
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.93 E-value=1e-24 Score=212.37 Aligned_cols=173 Identities=23% Similarity=0.397 Sum_probs=145.7
Q ss_pred hhHHHHhhcCCCCcEEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchhhh
Q 038830 135 ESSMKWLNDRANGSVVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGV 214 (335)
Q Consensus 135 ~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~v 214 (335)
.+...|. ..++++||+|+||.... .+.++.+.+++..++.++|...... ... ....++|..+..|+||..+
T Consensus 227 ~~~~~~~--~~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~~-~~~-----~~~~p~n~~v~~~~p~~~~ 297 (406)
T COG1819 227 NELPYWI--PADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGGA-RDT-----LVNVPDNVIVADYVPQLEL 297 (406)
T ss_pred ccCcchh--cCCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEecccc-ccc-----cccCCCceEEecCCCHHHH
Confidence 3344453 35678999999999966 6778889999999999999877542 111 1124578899999999999
Q ss_pred ccccCcCeEEccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCCcH
Q 038830 215 LAHEATGCFLTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGKRD 294 (335)
Q Consensus 215 L~h~~v~~fItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~ 294 (335)
|.++++ ||||||.|||+||+++|||+|++|...||+.||.++++. |+|+.+..+ ..+.+.++++|+++|.++
T Consensus 298 l~~ad~--vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~-G~G~~l~~~---~l~~~~l~~av~~vL~~~-- 369 (406)
T COG1819 298 LPRADA--VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEEL-GAGIALPFE---ELTEERLRAAVNEVLADD-- 369 (406)
T ss_pred hhhcCE--EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHc-CCceecCcc---cCCHHHHHHHHHHHhcCH--
Confidence 999999 999999999999999999999999999999999999999 999999876 689999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHh
Q 038830 295 KEIKQNADKWRNFAKEAVAKGGSSDKNIDDFVANLI 330 (335)
Q Consensus 295 ~~~r~~a~~l~~~~~~a~~~ggss~~~l~~~v~~~~ 330 (335)
.|+++++++++.+++. +| .....+.++++.
T Consensus 370 -~~~~~~~~~~~~~~~~---~g--~~~~a~~le~~~ 399 (406)
T COG1819 370 -SYRRAAERLAEEFKEE---DG--PAKAADLLEEFA 399 (406)
T ss_pred -HHHHHHHHHHHHhhhc---cc--HHHHHHHHHHHH
Confidence 9999999999999864 34 455666666643
No 27
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.91 E-value=6.9e-24 Score=206.09 Aligned_cols=158 Identities=19% Similarity=0.223 Sum_probs=131.6
Q ss_pred hhhHHHHhhcCCCCcEEEEEeCCcccCCH-HHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchh
Q 038830 134 IESSMKWLNDRANGSVVYVSFGSMATLKI-EEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQL 212 (335)
Q Consensus 134 ~~~~~~wLd~~~~~svvyvsfGS~~~~~~-~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~ 212 (335)
+.++..|++. .+++|||+|||+..... ..+..+++++...+.+++|+++...... ...++|+++.+|+||.
T Consensus 228 ~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~~~------~~~~~~v~~~~~~p~~ 299 (401)
T cd03784 228 PPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSLGWGGLGA------EDLPDNVRVVDFVPHD 299 (401)
T ss_pred CHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEccCccccc------cCCCCceEEeCCCCHH
Confidence 4566777764 56899999999986554 4567788899888999999988643211 2245788999999999
Q ss_pred hhccccCcCeEEccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 213 GVLAHEATGCFLTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 213 ~vL~h~~v~~fItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
.+|+|+++ ||||||+||++|++++|||+|++|+..||+.||+++++. |+|+.+... .++.++|.++|++++++
T Consensus 300 ~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~-G~g~~l~~~---~~~~~~l~~al~~~l~~- 372 (401)
T cd03784 300 WLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAEL-GAGPALDPR---ELTAERLAAALRRLLDP- 372 (401)
T ss_pred HHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHC-CCCCCCCcc---cCCHHHHHHHHHHHhCH-
Confidence 99999999 999999999999999999999999999999999999999 999998765 57999999999999985
Q ss_pred cHHHHHHHHHHHHHHHH
Q 038830 293 RDKEIKQNADKWRNFAK 309 (335)
Q Consensus 293 ~~~~~r~~a~~l~~~~~ 309 (335)
.++++++++.+.++
T Consensus 373 ---~~~~~~~~~~~~~~ 386 (401)
T cd03784 373 ---PSRRRAAALLRRIR 386 (401)
T ss_pred ---HHHHHHHHHHHHHH
Confidence 35566666666654
No 28
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.62 E-value=2.5e-15 Score=144.23 Aligned_cols=148 Identities=18% Similarity=0.211 Sum_probs=110.9
Q ss_pred hcCCCCcEEEEEeCCcccCCHHH-HHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeec-chh-hhcccc
Q 038830 142 NDRANGSVVYVSFGSMATLKIEE-MEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWC-PQL-GVLAHE 218 (335)
Q Consensus 142 d~~~~~svvyvsfGS~~~~~~~~-~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~-pq~-~vL~h~ 218 (335)
...+++++|+|..||++....++ +.+++..+. .+.+++|+++....+. .. .+. .+..+.+|+ ++. ++|+++
T Consensus 180 ~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~-~~~~vv~~~G~~~~~~---~~-~~~-~~~~~~~f~~~~m~~~~~~a 253 (352)
T PRK12446 180 GFSRKKPVITIMGGSLGAKKINETVREALPELL-LKYQIVHLCGKGNLDD---SL-QNK-EGYRQFEYVHGELPDILAIT 253 (352)
T ss_pred CCCCCCcEEEEECCccchHHHHHHHHHHHHhhc-cCcEEEEEeCCchHHH---HH-hhc-CCcEEecchhhhHHHHHHhC
Confidence 33456789999999999765544 444555553 2478899988642111 11 111 233555777 544 899999
Q ss_pred CcCeEEccCCcchHHHHHhcCCCeeecCCC-----CChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCCc
Q 038830 219 ATGCFLTHCGWNSTLEALSLGVPMVAMPLW-----TDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGKR 293 (335)
Q Consensus 219 ~v~~fItHgG~nSv~Eal~~GVP~i~~P~~-----~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~ 293 (335)
++ +|||+|.+|+.|++++|+|+|.+|+. .||..||+++++. |+|..+..+ .++.+.+.+++.+++++++
T Consensus 254 dl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~-g~~~~l~~~---~~~~~~l~~~l~~ll~~~~ 327 (352)
T PRK12446 254 DF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQ-GYASVLYEE---DVTVNSLIKHVEELSHNNE 327 (352)
T ss_pred CE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHC-CCEEEcchh---cCCHHHHHHHHHHHHcCHH
Confidence 99 99999999999999999999999985 4899999999999 999998765 6899999999999997752
Q ss_pred HHHHHHHHHH
Q 038830 294 DKEIKQNADK 303 (335)
Q Consensus 294 ~~~~r~~a~~ 303 (335)
.|++++++
T Consensus 328 --~~~~~~~~ 335 (352)
T PRK12446 328 --KYKTALKK 335 (352)
T ss_pred --HHHHHHHH
Confidence 45555444
No 29
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.55 E-value=3.6e-14 Score=135.79 Aligned_cols=148 Identities=19% Similarity=0.266 Sum_probs=115.2
Q ss_pred CCcEEEEEeCCcccCCHHH-HHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCC-c-eEEEeecchh-hhccccCcC
Q 038830 146 NGSVVYVSFGSMATLKIEE-MEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQ-K-GLVVNWCPQL-GVLAHEATG 221 (335)
Q Consensus 146 ~~svvyvsfGS~~~~~~~~-~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~-~-~~v~~w~pq~-~vL~h~~v~ 221 (335)
++++|+|..||++....++ +.++...|.+ +..+++.++.+... ........ + ..+.+|.+++ .+|+.+|+
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~~~----~~~~~~~~~~~~~v~~f~~dm~~~~~~ADL- 255 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKNDLE----ELKSAYNELGVVRVLPFIDDMAALLAAADL- 255 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcchHH----HHHHHHhhcCcEEEeeHHhhHHHHHHhccE-
Confidence 5789999999999755544 5566666655 67888888765311 12222221 2 5667888887 89999999
Q ss_pred eEEccCCcchHHHHHhcCCCeeecCCC----CChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCCc-HHH
Q 038830 222 CFLTHCGWNSTLEALSLGVPMVAMPLW----TDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGKR-DKE 296 (335)
Q Consensus 222 ~fItHgG~nSv~Eal~~GVP~i~~P~~----~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~-~~~ 296 (335)
+||++|.+|+.|..++|+|+|.+|+. .||..||+++++. |.|..+... .+|.+++.+.|.+++.+++ .+.
T Consensus 256 -vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~-gaa~~i~~~---~lt~~~l~~~i~~l~~~~~~l~~ 330 (357)
T COG0707 256 -VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKA-GAALVIRQS---ELTPEKLAELILRLLSNPEKLKA 330 (357)
T ss_pred -EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhC-CCEEEeccc---cCCHHHHHHHHHHHhcCHHHHHH
Confidence 99999999999999999999999984 3899999999999 999999877 6899999999999998753 245
Q ss_pred HHHHHHHH
Q 038830 297 IKQNADKW 304 (335)
Q Consensus 297 ~r~~a~~l 304 (335)
|+++++++
T Consensus 331 m~~~a~~~ 338 (357)
T COG0707 331 MAENAKKL 338 (357)
T ss_pred HHHHHHhc
Confidence 55555544
No 30
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.55 E-value=4.7e-16 Score=133.42 Aligned_cols=137 Identities=18% Similarity=0.254 Sum_probs=98.1
Q ss_pred EEEEEeCCcccCCHHH-HHHHHHHHhh--CCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecch-hhhccccCcCeEE
Q 038830 149 VVYVSFGSMATLKIEE-MEELPCGLKA--SDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQ-LGVLAHEATGCFL 224 (335)
Q Consensus 149 vvyvsfGS~~~~~~~~-~~~l~~~l~~--~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq-~~vL~h~~v~~fI 224 (335)
+|+|++||.+.....+ +.++...+.. ....++++++..........+ .....++.+.+|.++ ..++..+|+ +|
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~~~~~~~-~~~~~~v~~~~~~~~m~~~m~~aDl--vI 77 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNYEELKIKV-ENFNPNVKVFGFVDNMAELMAAADL--VI 77 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCECHHHCCCH-CCTTCCCEEECSSSSHHHHHHHHSE--EE
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcHHHHHHHH-hccCCcEEEEechhhHHHHHHHcCE--EE
Confidence 5899999988532222 2233333332 247788888765332222221 112257788899995 499999999 99
Q ss_pred ccCCcchHHHHHhcCCCeeecCCCC----ChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 225 THCGWNSTLEALSLGVPMVAMPLWT----DQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 225 tHgG~nSv~Eal~~GVP~i~~P~~~----DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
||||.+|+.|++++|+|+|++|... ||..||.++++. |+|..+... ..+.++|.+.|.+++.++
T Consensus 78 s~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~-g~~~~~~~~---~~~~~~L~~~i~~l~~~~ 145 (167)
T PF04101_consen 78 SHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKK-GAAIMLDES---ELNPEELAEAIEELLSDP 145 (167)
T ss_dssp ECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHC-CCCCCSECC---C-SCCCHHHHHHCHCCCH
T ss_pred eCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHc-CCccccCcc---cCCHHHHHHHHHHHHcCc
Confidence 9999999999999999999999988 999999999999 999998765 567899999999998776
No 31
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.39 E-value=1.8e-12 Score=122.06 Aligned_cols=122 Identities=20% Similarity=0.311 Sum_probs=96.3
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHhhCC-CcEEEEEeCCCCCcCCccchhhcCCceEEEeec-c-hhhhccccCcCe
Q 038830 146 NGSVVYVSFGSMATLKIEEMEELPCGLKASD-KYFLWVVRESEQSKLPENFSDETSQKGLVVNWC-P-QLGVLAHEATGC 222 (335)
Q Consensus 146 ~~svvyvsfGS~~~~~~~~~~~l~~~l~~~~-~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~-p-q~~vL~h~~v~~ 222 (335)
++..|+|+||..... .+++.+++.+ ..|++. +....+ ...+|+.+.+|. + -.++|+.+++
T Consensus 191 ~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~~~--------~~~~ni~~~~~~~~~~~~~m~~ad~-- 253 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNAAD--------PRPGNIHVRPFSTPDFAELMAAADL-- 253 (318)
T ss_pred CCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCccc--------ccCCCEEEeecChHHHHHHHHhCCE--
Confidence 456899999987642 4555565544 666655 443111 124677888876 3 3489999999
Q ss_pred EEccCCcchHHHHHhcCCCeeecCC--CCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHH
Q 038830 223 FLTHCGWNSTLEALSLGVPMVAMPL--WTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEI 288 (335)
Q Consensus 223 fItHgG~nSv~Eal~~GVP~i~~P~--~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~l 288 (335)
+|||||.||++|++++|+|+|++|. +.||..||+++++. |+|..+... .++++.|++.|+++
T Consensus 254 vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~-G~~~~~~~~---~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 254 VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEEL-GLGIVLSQE---DLTPERLAEFLERL 317 (318)
T ss_pred EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHC-CCeEEcccc---cCCHHHHHHHHhcC
Confidence 9999999999999999999999999 78999999999999 999999766 68999999998764
No 32
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.35 E-value=4.2e-12 Score=120.33 Aligned_cols=125 Identities=18% Similarity=0.213 Sum_probs=89.1
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecc-h-hhhccccCcCeE
Q 038830 146 NGSVVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCP-Q-LGVLAHEATGCF 223 (335)
Q Consensus 146 ~~svvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~p-q-~~vL~h~~v~~f 223 (335)
+++.|+|.+||... ..+++.|.+.+. +.+++...+ ...+ ..++|+.+.+|.| + ...|+.+++ |
T Consensus 187 ~~~~iLv~~g~~~~------~~l~~~l~~~~~-~~~i~~~~~--~~~~----~~~~~v~~~~~~~~~~~~~l~~ad~--v 251 (321)
T TIGR00661 187 GEDYILVYIGFEYR------YKILELLGKIAN-VKFVCYSYE--VAKN----SYNENVEIRRITTDNFKELIKNAEL--V 251 (321)
T ss_pred CCCcEEEECCcCCH------HHHHHHHHhCCC-eEEEEeCCC--CCcc----ccCCCEEEEECChHHHHHHHHhCCE--E
Confidence 35678888888653 234556655442 333333221 1111 2346788889997 3 378888888 9
Q ss_pred EccCCcchHHHHHhcCCCeeecCCCC--ChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 224 LTHCGWNSTLEALSLGVPMVAMPLWT--DQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 224 ItHgG~nSv~Eal~~GVP~i~~P~~~--DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
|||+|++|+.|++++|+|+|.+|..+ ||..||+++++. |+|+.+... .+ ++.+++.++++++
T Consensus 252 I~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~-g~~~~l~~~---~~---~~~~~~~~~~~~~ 315 (321)
T TIGR00661 252 ITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDL-GCGIALEYK---EL---RLLEAILDIRNMK 315 (321)
T ss_pred EECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHC-CCEEEcChh---hH---HHHHHHHhccccc
Confidence 99999999999999999999999965 899999999999 999888754 22 5555666666555
No 33
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.25 E-value=7.5e-11 Score=112.87 Aligned_cols=136 Identities=18% Similarity=0.277 Sum_probs=96.1
Q ss_pred CCcEEEEEeCCcccCCHHHHHH-HHHHHhhCCC--cEEEEEeCCCCCcCCccchhhcCCceEEEeecch-hhhccccCcC
Q 038830 146 NGSVVYVSFGSMATLKIEEMEE-LPCGLKASDK--YFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQ-LGVLAHEATG 221 (335)
Q Consensus 146 ~~svvyvsfGS~~~~~~~~~~~-l~~~l~~~~~--~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq-~~vL~h~~v~ 221 (335)
+..+|++..|+... ..+.. +.+++..... .++|.++.+..+.+.+.. + ..-++.+.+|..+ .++|+.+++
T Consensus 182 ~~~~i~~~gg~~~~---~~~~~~l~~a~~~~~~~~~~~~~~G~g~~~~~~~~~-~-~~~~v~~~g~~~~~~~~~~~~d~- 255 (357)
T PRK00726 182 GKPTLLVVGGSQGA---RVLNEAVPEALALLPEALQVIHQTGKGDLEEVRAAY-A-AGINAEVVPFIDDMAAAYAAADL- 255 (357)
T ss_pred CCeEEEEECCcHhH---HHHHHHHHHHHHHhhhCcEEEEEcCCCcHHHHHHHh-h-cCCcEEEeehHhhHHHHHHhCCE-
Confidence 45577776666543 22222 2244333222 455666654322221111 1 2223566788854 489999999
Q ss_pred eEEccCCcchHHHHHhcCCCeeecCC----CCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 222 CFLTHCGWNSTLEALSLGVPMVAMPL----WTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 222 ~fItHgG~nSv~Eal~~GVP~i~~P~----~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
+|+|+|.++++||+++|+|+|+.|. .+||..|+..+.+. |.|..+..+ .++.+++.++|.++++++
T Consensus 256 -~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~-~~g~~~~~~---~~~~~~l~~~i~~ll~~~ 325 (357)
T PRK00726 256 -VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVDA-GAALLIPQS---DLTPEKLAEKLLELLSDP 325 (357)
T ss_pred -EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHC-CCEEEEEcc---cCCHHHHHHHHHHHHcCH
Confidence 9999999999999999999999997 46899999999999 999999765 467999999999999987
No 34
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.24 E-value=4.7e-11 Score=113.50 Aligned_cols=144 Identities=16% Similarity=0.235 Sum_probs=102.0
Q ss_pred hcCCCCcEEEEEeCCcccCCHH-HHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecc-hhhhccccC
Q 038830 142 NDRANGSVVYVSFGSMATLKIE-EMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCP-QLGVLAHEA 219 (335)
Q Consensus 142 d~~~~~svvyvsfGS~~~~~~~-~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~p-q~~vL~h~~ 219 (335)
...+++.+|++..|+....... .+.+.+..+...+..+++.++.+..+.+.+...+ ..+++.+.+|.. ...+|+.++
T Consensus 176 ~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~~~~l~~~~~~-~~~~v~~~g~~~~~~~~l~~ad 254 (350)
T cd03785 176 GLRPGKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGDLEEVKKAYEE-LGVNYEVFPFIDDMAAAYAAAD 254 (350)
T ss_pred CCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCccHHHHHHHHhc-cCCCeEEeehhhhHHHHHHhcC
Confidence 3334556777777776532222 2334455555444556677765422222221111 135778888873 348999999
Q ss_pred cCeEEccCCcchHHHHHhcCCCeeecCC----CCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 220 TGCFLTHCGWNSTLEALSLGVPMVAMPL----WTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 220 v~~fItHgG~nSv~Eal~~GVP~i~~P~----~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
+ +|+|+|.++++||+++|+|+|+.|. ..+|..|+..+.+. |.|+.+..+ ..+.+++.++|+++++++
T Consensus 255 ~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~-g~g~~v~~~---~~~~~~l~~~i~~ll~~~ 325 (350)
T cd03785 255 L--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVKA-GAAVLIPQE---ELTPERLAAALLELLSDP 325 (350)
T ss_pred E--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhC-CCEEEEecC---CCCHHHHHHHHHHHhcCH
Confidence 9 9999999999999999999999986 36799999999998 999998754 358999999999999876
No 35
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.15 E-value=9.2e-10 Score=107.18 Aligned_cols=145 Identities=13% Similarity=0.268 Sum_probs=102.9
Q ss_pred CCCcEEEEEeCCcccCCHHHHHHHHHHHhh--CCCcEEEEEeCCCCCcCCccchhhc--CCceEEEeecchh-hhccccC
Q 038830 145 ANGSVVYVSFGSMATLKIEEMEELPCGLKA--SDKYFLWVVRESEQSKLPENFSDET--SQKGLVVNWCPQL-GVLAHEA 219 (335)
Q Consensus 145 ~~~svvyvsfGS~~~~~~~~~~~l~~~l~~--~~~~flw~~~~~~~~~l~~~~~~~~--~~~~~v~~w~pq~-~vL~h~~ 219 (335)
+++++|+++.|+++.. ..+..+++++.+ .+.+++++.+.+. .+.+.+.+.. .+++.+.+|.++. .+++.+|
T Consensus 200 ~~~~~ilv~~G~lg~~--k~~~~li~~~~~~~~~~~~vvv~G~~~--~l~~~l~~~~~~~~~v~~~G~~~~~~~~~~~aD 275 (391)
T PRK13608 200 PDKQTILMSAGAFGVS--KGFDTMITDILAKSANAQVVMICGKSK--ELKRSLTAKFKSNENVLILGYTKHMNEWMASSQ 275 (391)
T ss_pred CCCCEEEEECCCcccc--hhHHHHHHHHHhcCCCceEEEEcCCCH--HHHHHHHHHhccCCCeEEEeccchHHHHHHhhh
Confidence 4567889999998732 334455555322 3456766665431 1112222211 2467777999776 8999999
Q ss_pred cCeEEccCCcchHHHHHhcCCCeeec-CCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCCcH-HHH
Q 038830 220 TGCFLTHCGWNSTLEALSLGVPMVAM-PLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGKRD-KEI 297 (335)
Q Consensus 220 v~~fItHgG~nSv~Eal~~GVP~i~~-P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~-~~~ 297 (335)
+ ||+..|..|+.||+++|+|+|+. |..++|..|+.++.+. |+|+... +.+++.++|.+++++++. ++|
T Consensus 276 l--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~-G~g~~~~-------~~~~l~~~i~~ll~~~~~~~~m 345 (391)
T PRK13608 276 L--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEK-GFGKIAD-------TPEEAIKIVASLTNGNEQLTNM 345 (391)
T ss_pred E--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhC-CcEEEeC-------CHHHHHHHHHHHhcCHHHHHHH
Confidence 9 99999999999999999999987 7777788999999999 9997753 688899999999987632 344
Q ss_pred HHHHHH
Q 038830 298 KQNADK 303 (335)
Q Consensus 298 r~~a~~ 303 (335)
++++++
T Consensus 346 ~~~~~~ 351 (391)
T PRK13608 346 ISTMEQ 351 (391)
T ss_pred HHHHHH
Confidence 444444
No 36
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.06 E-value=3e-09 Score=102.79 Aligned_cols=134 Identities=19% Similarity=0.276 Sum_probs=98.6
Q ss_pred CCCcEEEEEeCCcccCCHHHHHHHHHHHhhC-CCcEEEEEeCCCCCcCCccchh---hcCCceEEEeecchh-hhccccC
Q 038830 145 ANGSVVYVSFGSMATLKIEEMEELPCGLKAS-DKYFLWVVRESEQSKLPENFSD---ETSQKGLVVNWCPQL-GVLAHEA 219 (335)
Q Consensus 145 ~~~svvyvsfGS~~~~~~~~~~~l~~~l~~~-~~~flw~~~~~~~~~l~~~~~~---~~~~~~~v~~w~pq~-~vL~h~~ 219 (335)
++++++++..|+.+.. +.+.++++++.+. +.+++++.+.+. .+.+.+.+ ..++++.+.+|+++. +++++++
T Consensus 200 ~~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~~--~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~~aD 275 (380)
T PRK13609 200 PNKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKNE--ALKQSLEDLQETNPDALKVFGYVENIDELFRVTS 275 (380)
T ss_pred CCCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCCH--HHHHHHHHHHhcCCCcEEEEechhhHHHHHHhcc
Confidence 4566888888888743 2345666666543 567776665431 11112211 223477888999886 8999999
Q ss_pred cCeEEccCCcchHHHHHhcCCCeeec-CCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 220 TGCFLTHCGWNSTLEALSLGVPMVAM-PLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 220 v~~fItHgG~nSv~Eal~~GVP~i~~-P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
+ ||++.|..|++||+++|+|+|+. |..++|..|+.++.+. |+|+... +.+++.++|.++++++
T Consensus 276 ~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~-G~~~~~~-------~~~~l~~~i~~ll~~~ 339 (380)
T PRK13609 276 C--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERK-GAAVVIR-------DDEEVFAKTEALLQDD 339 (380)
T ss_pred E--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhC-CcEEEEC-------CHHHHHHHHHHHHCCH
Confidence 8 99999999999999999999984 7778888999999888 8887542 5789999999999876
No 37
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.04 E-value=6.7e-09 Score=100.74 Aligned_cols=143 Identities=18% Similarity=0.170 Sum_probs=97.4
Q ss_pred HHHHhhcCCCCcEEEEEeCCcccCCHHHH-HHHHHHHh-----hCCCcEEEEEeCCCCCcCCccchhh-cCCceEEEeec
Q 038830 137 SMKWLNDRANGSVVYVSFGSMATLKIEEM-EELPCGLK-----ASDKYFLWVVRESEQSKLPENFSDE-TSQKGLVVNWC 209 (335)
Q Consensus 137 ~~~wLd~~~~~svvyvsfGS~~~~~~~~~-~~l~~~l~-----~~~~~flw~~~~~~~~~l~~~~~~~-~~~~~~v~~w~ 209 (335)
..+-+...+++++|.+..|+.+......+ ..+...+. ..+..++++++.+. .+.+.+.+. ...++.+.+|+
T Consensus 196 ~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~--~~~~~L~~~~~~~~v~~~G~~ 273 (382)
T PLN02605 196 LRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK--KLQSKLESRDWKIPVKVRGFV 273 (382)
T ss_pred HHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH--HHHHHHHhhcccCCeEEEecc
Confidence 33334444556788888887764333332 23322221 13355677776541 111112111 12356777999
Q ss_pred chh-hhccccCcCeEEccCCcchHHHHHhcCCCeeecCCCCChh-hhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHH
Q 038830 210 PQL-GVLAHEATGCFLTHCGWNSTLEALSLGVPMVAMPLWTDQS-TNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISE 287 (335)
Q Consensus 210 pq~-~vL~h~~v~~fItHgG~nSv~Eal~~GVP~i~~P~~~DQ~-~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ 287 (335)
++. ++++.+|+ ||+.+|.+|++||+++|+|+|+.+....|. .|+.++.+. |.|+.+ . +.+++.++|.+
T Consensus 274 ~~~~~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~-g~g~~~--~-----~~~~la~~i~~ 343 (382)
T PLN02605 274 TNMEEWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDN-GFGAFS--E-----SPKEIARIVAE 343 (382)
T ss_pred ccHHHHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHhC-Cceeec--C-----CHHHHHHHHHH
Confidence 877 89999999 999999999999999999999987655554 799999988 998765 2 68999999999
Q ss_pred HHcC
Q 038830 288 ILEG 291 (335)
Q Consensus 288 ll~~ 291 (335)
++.+
T Consensus 344 ll~~ 347 (382)
T PLN02605 344 WFGD 347 (382)
T ss_pred HHcC
Confidence 9987
No 38
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=98.98 E-value=2e-09 Score=102.21 Aligned_cols=137 Identities=17% Similarity=0.231 Sum_probs=90.7
Q ss_pred CCcEEEEEeCCcccCCHHH-HHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCc--eEEEeec--chhhhccccCc
Q 038830 146 NGSVVYVSFGSMATLKIEE-MEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQK--GLVVNWC--PQLGVLAHEAT 220 (335)
Q Consensus 146 ~~svvyvsfGS~~~~~~~~-~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~--~~v~~w~--pq~~vL~h~~v 220 (335)
+..+|.+..|+........ +.+.+..+...+..++++.+.... +.+.+..... ..++.|. +-..+|+.+++
T Consensus 178 ~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~~~~~~~~~g~~~~----~~l~~~~~~~~l~~~v~~~~~~~~~~l~~ad~ 253 (348)
T TIGR01133 178 GKPTILVLGGSQGAKILNELVPKALAKLAEKGIQIVHQTGKNDL----EKVKNVYQELGIEAIVTFIDENMAAAYAAADL 253 (348)
T ss_pred CCeEEEEECCchhHHHHHHHHHHHHHHHhhcCcEEEEECCcchH----HHHHHHHhhCCceEEecCcccCHHHHHHhCCE
Confidence 4455555556655311111 223334444445566655544321 2222222211 1233344 33589999999
Q ss_pred CeEEccCCcchHHHHHhcCCCeeecCCC---CChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 221 GCFLTHCGWNSTLEALSLGVPMVAMPLW---TDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 221 ~~fItHgG~nSv~Eal~~GVP~i~~P~~---~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
||+++|.++++||+++|+|+|+.|.. .+|..|+.++++. +.|..+... ..+.+++.++++++++++
T Consensus 254 --~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~-~~G~~~~~~---~~~~~~l~~~i~~ll~~~ 322 (348)
T TIGR01133 254 --VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDL-GAGLVIRQK---ELLPEKLLEALLKLLLDP 322 (348)
T ss_pred --EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHC-CCEEEEecc---cCCHHHHHHHHHHHHcCH
Confidence 99999989999999999999998873 5788899999988 999988654 457999999999999876
No 39
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.81 E-value=2.2e-08 Score=97.36 Aligned_cols=174 Identities=15% Similarity=0.054 Sum_probs=108.9
Q ss_pred hhcCCCCcEEEEEeCCcccCCHHHHHHHHH---HHhhC--CCcEEEEEeCCCCCcCCccchhhcCCceEEEeec-chhhh
Q 038830 141 LNDRANGSVVYVSFGSMATLKIEEMEELPC---GLKAS--DKYFLWVVRESEQSKLPENFSDETSQKGLVVNWC-PQLGV 214 (335)
Q Consensus 141 Ld~~~~~svvyvsfGS~~~~~~~~~~~l~~---~l~~~--~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~-pq~~v 214 (335)
+...+++++|.+..||....-...+..+++ .+... +..+++.+........-+.+.+....+..+..+. ....+
T Consensus 185 lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 264 (385)
T TIGR00215 185 LGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFKRRLQFEQIKAEYGPDLQLHLIDGDARKA 264 (385)
T ss_pred cCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCchhHHHHHHHHHHhCCCCcEEEECchHHHH
Confidence 344456778889899987532223334443 33322 3445554432211000011111111122222221 23479
Q ss_pred ccccCcCeEEccCCcchHHHHHhcCCCeeec----CCCC---------ChhhhHHHHHHHhccceeecCCCCCCcCHHHH
Q 038830 215 LAHEATGCFLTHCGWNSTLEALSLGVPMVAM----PLWT---------DQSTNSKYVMDVWKMGLKVPADEKGIVRREAI 281 (335)
Q Consensus 215 L~h~~v~~fItHgG~nSv~Eal~~GVP~i~~----P~~~---------DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l 281 (335)
|+.+|+ ||+.+|..|+ |++++|+|+|.. |+.. .|..|+..+.+. ++...+..+ ..+.+.|
T Consensus 265 l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~-~~~pel~q~---~~~~~~l 337 (385)
T TIGR00215 265 MFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANR-LLVPELLQE---ECTPHPL 337 (385)
T ss_pred HHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCC-ccchhhcCC---CCCHHHH
Confidence 999999 9999999887 999999999998 7642 378899999999 888888765 6899999
Q ss_pred HHHHHHHHcCC----cH-HHHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 038830 282 AHCISEILEGK----RD-KEIKQNADKWRNFAKEAVAKGGSSDKNIDDF 325 (335)
Q Consensus 282 ~~~i~~ll~~~----~~-~~~r~~a~~l~~~~~~a~~~ggss~~~l~~~ 325 (335)
.+.+.++++++ +. +.+++...++++.+ .++|.|.+.-+.+
T Consensus 338 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~a~~i 382 (385)
T TIGR00215 338 AIALLLLLENGLKAYKEMHRERQFFEELRQRI----YCNADSERAAQAV 382 (385)
T ss_pred HHHHHHHhcCCcccHHHHHHHHHHHHHHHHHh----cCCCHHHHHHHHH
Confidence 99999999886 42 45566555555544 4556666554433
No 40
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.76 E-value=8.1e-08 Score=93.78 Aligned_cols=139 Identities=17% Similarity=0.096 Sum_probs=90.8
Q ss_pred CCCcEEEEEeCCcccCCHHHHHHHHHHHhh----CCCcEEEEEeCCC-CCcCCccchh-hc--------------CCceE
Q 038830 145 ANGSVVYVSFGSMATLKIEEMEELPCGLKA----SDKYFLWVVRESE-QSKLPENFSD-ET--------------SQKGL 204 (335)
Q Consensus 145 ~~~svvyvsfGS~~~~~~~~~~~l~~~l~~----~~~~flw~~~~~~-~~~l~~~~~~-~~--------------~~~~~ 204 (335)
+++++|.+--||....-.+.+..++++++. .+..|++.+.++. ...+.+.+.+ .. .++..
T Consensus 203 ~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 282 (396)
T TIGR03492 203 TGRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLE 282 (396)
T ss_pred CCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccchhhccCceE
Confidence 345689999999975333344444444433 3677888874321 1111110000 00 11234
Q ss_pred EEeecch-hhhccccCcCeEEccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHH---hccceeecCCCCCCcCHHH
Q 038830 205 VVNWCPQ-LGVLAHEATGCFLTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDV---WKMGLKVPADEKGIVRREA 280 (335)
Q Consensus 205 v~~w~pq-~~vL~h~~v~~fItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~---~g~G~~l~~~~~~~~~~~~ 280 (335)
+..+..+ ..+++.+++ +|+.+|..| .|+++.|+|+|.+|+-.+|. |+.+.++. .|.++.+.. .+.+.
T Consensus 283 v~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~~~~~~l~g~~~~l~~-----~~~~~ 353 (396)
T TIGR03492 283 VLLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFAEAQSRLLGGSVFLAS-----KNPEQ 353 (396)
T ss_pred EEechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHHHhhHhhcCCEEecCC-----CCHHH
Confidence 4455444 489999999 999999766 99999999999999888886 99887762 144555542 24589
Q ss_pred HHHHHHHHHcCC
Q 038830 281 IAHCISEILEGK 292 (335)
Q Consensus 281 l~~~i~~ll~~~ 292 (335)
+.+++.++++++
T Consensus 354 l~~~l~~ll~d~ 365 (396)
T TIGR03492 354 AAQVVRQLLADP 365 (396)
T ss_pred HHHHHHHHHcCH
Confidence 999999999876
No 41
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.69 E-value=4.4e-08 Score=91.19 Aligned_cols=103 Identities=18% Similarity=0.186 Sum_probs=75.8
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHhh--CCCcEEEEEeCCCCCcCCccchhh--cCCceEEEeecchh-hhccccCcCe
Q 038830 148 SVVYVSFGSMATLKIEEMEELPCGLKA--SDKYFLWVVRESEQSKLPENFSDE--TSQKGLVVNWCPQL-GVLAHEATGC 222 (335)
Q Consensus 148 svvyvsfGS~~~~~~~~~~~l~~~l~~--~~~~flw~~~~~~~~~l~~~~~~~--~~~~~~v~~w~pq~-~vL~h~~v~~ 222 (335)
+.|+|+||...... ....++++|.. .+.++.+++++... ..+.+.+. ..+|..+..++++. .+|+.+++
T Consensus 171 ~~iLi~~GG~d~~~--~~~~~l~~l~~~~~~~~i~vv~G~~~~--~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~aDl-- 244 (279)
T TIGR03590 171 RRVLVSFGGADPDN--LTLKLLSALAESQINISITLVTGSSNP--NLDELKKFAKEYPNIILFIDVENMAELMNEADL-- 244 (279)
T ss_pred CeEEEEeCCcCCcC--HHHHHHHHHhccccCceEEEEECCCCc--CHHHHHHHHHhCCCEEEEeCHHHHHHHHHHCCE--
Confidence 56899998655322 23455566654 34567777776422 11222221 23577888999987 89999999
Q ss_pred EEccCCcchHHHHHhcCCCeeecCCCCChhhhHHH
Q 038830 223 FLTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKY 257 (335)
Q Consensus 223 fItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~ 257 (335)
+||++| +|+.|++++|+|+|++|...+|..||+.
T Consensus 245 ~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 245 AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 999999 9999999999999999999999999985
No 42
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.58 E-value=3.5e-07 Score=88.17 Aligned_cols=172 Identities=13% Similarity=0.112 Sum_probs=92.1
Q ss_pred HHhhcCCCCcEEEEEeCCcccCCHHHHHHHHHH---Hhh--CCCcEEEEEeCCCCCcCCccchhhcCC----ceEEEeec
Q 038830 139 KWLNDRANGSVVYVSFGSMATLKIEEMEELPCG---LKA--SDKYFLWVVRESEQSKLPENFSDETSQ----KGLVVNWC 209 (335)
Q Consensus 139 ~wLd~~~~~svvyvsfGS~~~~~~~~~~~l~~~---l~~--~~~~flw~~~~~~~~~l~~~~~~~~~~----~~~v~~w~ 209 (335)
+.+...+++++|.+..||........+..++++ +.+ .+..|+|+.+... ..+.+.+.... ++.+ +.
T Consensus 178 ~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~---~~~~~~~~~~~~~~~~v~~--~~ 252 (380)
T PRK00025 178 ARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK---RREQIEEALAEYAGLEVTL--LD 252 (380)
T ss_pred HHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh---hHHHHHHHHhhcCCCCeEE--Ec
Confidence 334433455677787888764211223333333 322 2456777655221 11122222211 2222 22
Q ss_pred ch-hhhccccCcCeEEccCCcchHHHHHhcCCCeeecCCCC--------Chhhh-----HHHHHHHhccceeecCCCCCC
Q 038830 210 PQ-LGVLAHEATGCFLTHCGWNSTLEALSLGVPMVAMPLWT--------DQSTN-----SKYVMDVWKMGLKVPADEKGI 275 (335)
Q Consensus 210 pq-~~vL~h~~v~~fItHgG~nSv~Eal~~GVP~i~~P~~~--------DQ~~N-----a~~v~~~~g~G~~l~~~~~~~ 275 (335)
++ ..+++.+|+ +|+.+|.+++ |++++|+|+|..|-.. +|..| +..+.+. +++..+... .
T Consensus 253 ~~~~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~---~ 325 (380)
T PRK00025 253 GQKREAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGR-ELVPELLQE---E 325 (380)
T ss_pred ccHHHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCC-CcchhhcCC---C
Confidence 33 389999999 9999998877 9999999999885432 22222 2222222 223333322 4
Q ss_pred cCHHHHHHHHHHHHcCCcH-HHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 038830 276 VRREAIAHCISEILEGKRD-KEIKQNADKWRNFAKEAVAKGGSSDKNIDDFVA 327 (335)
Q Consensus 276 ~~~~~l~~~i~~ll~~~~~-~~~r~~a~~l~~~~~~a~~~ggss~~~l~~~v~ 327 (335)
.+.+++.+.+.++++|++. ++|+++++++.+. . ..|.+.+..+.+.+
T Consensus 326 ~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~----~-~~~a~~~~~~~i~~ 373 (380)
T PRK00025 326 ATPEKLARALLPLLADGARRQALLEGFTELHQQ----L-RCGADERAAQAVLE 373 (380)
T ss_pred CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH----h-CCCHHHHHHHHHHH
Confidence 6899999999999998732 3444444444332 2 23444444444433
No 43
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.36 E-value=1.4e-05 Score=74.85 Aligned_cols=128 Identities=19% Similarity=0.205 Sum_probs=85.6
Q ss_pred cEEEEEeCCccc-CCHHHHHHHHHHHhhC-CCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchh---hhccccCcCe
Q 038830 148 SVVYVSFGSMAT-LKIEEMEELPCGLKAS-DKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQL---GVLAHEATGC 222 (335)
Q Consensus 148 svvyvsfGS~~~-~~~~~~~~l~~~l~~~-~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~---~vL~h~~v~~ 222 (335)
..+++..|+... ...+.+.+++..+... +..+++ ++..... +.+. ...+++.+.+|+++. .+++.+++
T Consensus 197 ~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i-~G~~~~~---~~~~-~~~~~v~~~g~~~~~~~~~~~~~~d~-- 269 (364)
T cd03814 197 RPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVI-VGDGPAR---ARLE-ARYPNVHFLGFLDGEELAAAYASADV-- 269 (364)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHhhhcCCceEEE-EeCCchH---HHHh-ccCCcEEEEeccCHHHHHHHHHhCCE--
Confidence 456677777653 2334555555555432 345444 4432111 1111 234677888998876 58999999
Q ss_pred EEccCC----cchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 223 FLTHCG----WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 223 fItHgG----~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
+|..+. .++++||+++|+|+|+.+..+ +...+.+. +.|..+... +.+++.++|.+++.++
T Consensus 270 ~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~~-~~g~~~~~~-----~~~~l~~~i~~l~~~~ 333 (364)
T cd03814 270 FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTDG-ENGLLVEPG-----DAEAFAAALAALLADP 333 (364)
T ss_pred EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcCC-cceEEcCCC-----CHHHHHHHHHHHHcCH
Confidence 886654 478999999999999987654 55666666 788877643 6788999999999877
No 44
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=98.12 E-value=8.1e-05 Score=69.46 Aligned_cols=133 Identities=20% Similarity=0.215 Sum_probs=83.6
Q ss_pred CCcEEEEEeCCcccCC-HHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchh---hhccccCcC
Q 038830 146 NGSVVYVSFGSMATLK-IEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQL---GVLAHEATG 221 (335)
Q Consensus 146 ~~svvyvsfGS~~~~~-~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~---~vL~h~~v~ 221 (335)
....+++..|+..... .+.+.+.+..+...+..|+++ +...... .........+++.+.+|+++. .+++.+++
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~-G~~~~~~-~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~- 265 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIV-GNGLELE-EESYELEGDPRVEFLGAYPQEEIDDFYAEIDV- 265 (359)
T ss_pred CCceEEEEEecCccccCHHHHHHHHHHHHhcCcEEEEE-cCchhhh-HHHHhhcCCCeEEEeCCCCHHHHHHHHHhCCE-
Confidence 4456777788876422 334444444444335565544 3321110 000001123577788998755 67999998
Q ss_pred eEEc--c--CC-cchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 222 CFLT--H--CG-WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 222 ~fIt--H--gG-~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
+|. + .| -++++||+++|+|+|+-+.. .+...+.+. +.|..+..+ +.+++.+++.++++++
T Consensus 266 -~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~-~~g~~~~~~-----d~~~l~~~i~~l~~~~ 330 (359)
T cd03823 266 -LVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELVRDG-VNGLLFPPG-----DAEDLAAALERLIDDP 330 (359)
T ss_pred -EEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHhcCC-CcEEEECCC-----CHHHHHHHHHHHHhCh
Confidence 663 2 33 35799999999999986643 456666665 678888654 5899999999999876
No 45
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=98.04 E-value=2.7e-05 Score=73.21 Aligned_cols=137 Identities=17% Similarity=0.256 Sum_probs=97.1
Q ss_pred CCCcEEEEEeCCcccCCHHHHHHHHHHHhh-CCCcEEEEEeCCCCCcCCccchh----hcC--CceEEEeecchh-hhcc
Q 038830 145 ANGSVVYVSFGSMATLKIEEMEELPCGLKA-SDKYFLWVVRESEQSKLPENFSD----ETS--QKGLVVNWCPQL-GVLA 216 (335)
Q Consensus 145 ~~~svvyvsfGS~~~~~~~~~~~l~~~l~~-~~~~flw~~~~~~~~~l~~~~~~----~~~--~~~~v~~w~pq~-~vL~ 216 (335)
+++--|.||-|-... ..+.+...+.+-.. .+.+=.|.+-.+ ..+|+.-.+ ..+ +++.|..|-.+. .++.
T Consensus 217 pE~~~Ilvs~GGG~d-G~eLi~~~l~A~~~l~~l~~~~~ivtG--P~MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~ 293 (400)
T COG4671 217 PEGFDILVSVGGGAD-GAELIETALAAAQLLAGLNHKWLIVTG--PFMPEAQRQKLLASAPKRPHISIFEFRNDFESLLA 293 (400)
T ss_pred CccceEEEecCCChh-hHHHHHHHHHHhhhCCCCCcceEEEeC--CCCCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHH
Confidence 344567777665442 22334444443222 333324544322 135543322 233 567788888776 8898
Q ss_pred ccCcCeEEccCCcchHHHHHhcCCCeeecCCC---CChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHc
Q 038830 217 HEATGCFLTHCGWNSTLEALSLGVPMVAMPLW---TDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILE 290 (335)
Q Consensus 217 h~~v~~fItHgG~nSv~Eal~~GVP~i~~P~~---~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~ 290 (335)
.++. +||-+|.||+.|-+++|+|.+++|.. -||-.-|.++++. |+.-.+..+ .+++..+.++|+..++
T Consensus 294 gA~~--vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~L-GL~dvL~pe---~lt~~~La~al~~~l~ 364 (400)
T COG4671 294 GARL--VVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEEL-GLVDVLLPE---NLTPQNLADALKAALA 364 (400)
T ss_pred hhhe--eeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhc-CcceeeCcc---cCChHHHHHHHHhccc
Confidence 9998 99999999999999999999999986 4899999999999 888777776 6899999999998887
No 46
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.02 E-value=4.2e-05 Score=71.95 Aligned_cols=145 Identities=18% Similarity=0.154 Sum_probs=86.8
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHhhCC-CcEEEEEeCCCCCcCCccc-hhhcCCceEEEeecchh---hhccccCcCe
Q 038830 148 SVVYVSFGSMATLKIEEMEELPCGLKASD-KYFLWVVRESEQSKLPENF-SDETSQKGLVVNWCPQL---GVLAHEATGC 222 (335)
Q Consensus 148 svvyvsfGS~~~~~~~~~~~l~~~l~~~~-~~flw~~~~~~~~~l~~~~-~~~~~~~~~v~~w~pq~---~vL~h~~v~~ 222 (335)
..+++..|+.... +.+..+++++.... ..++.+-.+.....+.+.. .....+++.+.+|+|+. .+++.+++..
T Consensus 191 ~~~i~~~G~~~~~--K~~~~li~a~~~l~~~~l~i~G~g~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i 268 (357)
T cd03795 191 RPFFLFVGRLVYY--KGLDVLLEAAAALPDAPLVIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFV 268 (357)
T ss_pred CcEEEEecccccc--cCHHHHHHHHHhccCcEEEEEeCChhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEE
Confidence 3466677776532 33445666665554 4444332221111111111 01234678888999975 6888899844
Q ss_pred EEcc---CC-cchHHHHHhcCCCeeecCCCCChhhhHHHHHH-HhccceeecCCCCCCcCHHHHHHHHHHHHcCCcH-HH
Q 038830 223 FLTH---CG-WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMD-VWKMGLKVPADEKGIVRREAIAHCISEILEGKRD-KE 296 (335)
Q Consensus 223 fItH---gG-~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~-~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~-~~ 296 (335)
+.++ -| -.+++||+++|+|+|+-...+.. ..+.+ . +.|..+..+ +.+++.++|.+++++++. ++
T Consensus 269 ~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~----~~i~~~~-~~g~~~~~~-----d~~~~~~~i~~l~~~~~~~~~ 338 (357)
T cd03795 269 FPSVERSEAFGIVLLEAMAFGKPVISTEIGTGG----SYVNLHG-VTGLVVPPG-----DPAALAEAIRRLLEDPELRER 338 (357)
T ss_pred eCCcccccccchHHHHHHHcCCCEEecCCCCch----hHHhhCC-CceEEeCCC-----CHHHHHHHHHHHHHCHHHHHH
Confidence 4443 23 34799999999999997654443 33333 4 677777643 789999999999987632 44
Q ss_pred HHHHHHHH
Q 038830 297 IKQNADKW 304 (335)
Q Consensus 297 ~r~~a~~l 304 (335)
|++++++.
T Consensus 339 ~~~~~~~~ 346 (357)
T cd03795 339 LGEAARER 346 (357)
T ss_pred HHHHHHHH
Confidence 55554443
No 47
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=98.02 E-value=6.1e-05 Score=70.62 Aligned_cols=147 Identities=22% Similarity=0.279 Sum_probs=86.0
Q ss_pred CCcEEEEEeCCcccC-CHHHHHHHHHHHhhC-CCcEEEEEeCCCC-CcCCccchhhcCCceEEEeecchh---hhccccC
Q 038830 146 NGSVVYVSFGSMATL-KIEEMEELPCGLKAS-DKYFLWVVRESEQ-SKLPENFSDETSQKGLVVNWCPQL---GVLAHEA 219 (335)
Q Consensus 146 ~~svvyvsfGS~~~~-~~~~~~~l~~~l~~~-~~~flw~~~~~~~-~~l~~~~~~~~~~~~~v~~w~pq~---~vL~h~~ 219 (335)
+++.+++..|+.... ..+.+.+.+..+... +..+++ ++.+.. ..+.+.......+++.+.+++++. .+++.++
T Consensus 218 ~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i-~G~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d 296 (394)
T cd03794 218 DDKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLI-VGDGPEKEELKELAKALGLDNVTFLGRVPKEELPELLAAAD 296 (394)
T ss_pred CCcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEE-eCCcccHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhC
Confidence 345677778887642 234444555555443 445443 333211 111110011123567778888765 6789999
Q ss_pred cCeEEccCC-------cchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 220 TGCFLTHCG-------WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 220 v~~fItHgG-------~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
+..+-++.+ -++++||+++|+|+|+.+..+.+. .+.+. +.|..+..+ +.+++.++|.+++.++
T Consensus 297 i~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~----~~~~~-~~g~~~~~~-----~~~~l~~~i~~~~~~~ 366 (394)
T cd03794 297 VGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAE----LVEEA-GAGLVVPPG-----DPEALAAAILELLDDP 366 (394)
T ss_pred eeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchh----hhccC-CcceEeCCC-----CHHHHHHHHHHHHhCh
Confidence 933333322 344799999999999988765443 33333 667777643 7899999999999776
Q ss_pred cH-HHHHHHHHH
Q 038830 293 RD-KEIKQNADK 303 (335)
Q Consensus 293 ~~-~~~r~~a~~ 303 (335)
+. +.+++++++
T Consensus 367 ~~~~~~~~~~~~ 378 (394)
T cd03794 367 EERAEMGENGRR 378 (394)
T ss_pred HHHHHHHHHHHH
Confidence 32 334444443
No 48
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=98.01 E-value=7.6e-05 Score=69.82 Aligned_cols=146 Identities=19% Similarity=0.249 Sum_probs=87.1
Q ss_pred CcEEEEEeCCcccC-CHHHHHHHHHHHhh--CCCcEEEEEeCCCCCcCCccchh--hcCCceEEEeecchh---hhcccc
Q 038830 147 GSVVYVSFGSMATL-KIEEMEELPCGLKA--SDKYFLWVVRESEQSKLPENFSD--ETSQKGLVVNWCPQL---GVLAHE 218 (335)
Q Consensus 147 ~svvyvsfGS~~~~-~~~~~~~l~~~l~~--~~~~flw~~~~~~~~~l~~~~~~--~~~~~~~v~~w~pq~---~vL~h~ 218 (335)
+..+++..|+.... ..+.+.+++..+.. .+..++++-+......+.+ ..+ ...+++.+.+++|+. .+++++
T Consensus 201 ~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~-~~~~~~~~~~v~~~g~~~~~~~~~~~~~a 279 (374)
T cd03817 201 DEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGPEREELEE-LARELGLADRVIFTGFVPREELPDYYKAA 279 (374)
T ss_pred CCeEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCchHHHHHH-HHHHcCCCCcEEEeccCChHHHHHHHHHc
Confidence 34556667876632 23445555555544 3345544432221111111 111 123577788999875 678899
Q ss_pred CcCeEEccC----CcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCCcH
Q 038830 219 ATGCFLTHC----GWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGKRD 294 (335)
Q Consensus 219 ~v~~fItHg----G~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~ 294 (335)
++ +|..+ ..++++||+++|+|+|+.+.. ..+..+.+. +.|..+..+ +. ++.+++.+++++++.
T Consensus 280 d~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~----~~~~~i~~~-~~g~~~~~~-----~~-~~~~~i~~l~~~~~~ 346 (374)
T cd03817 280 DL--FVFASTTETQGLVLLEAMAAGLPVVAVDAP----GLPDLVADG-ENGFLFPPG-----DE-ALAEALLRLLQDPEL 346 (374)
T ss_pred CE--EEecccccCcChHHHHHHHcCCcEEEeCCC----ChhhheecC-ceeEEeCCC-----CH-HHHHHHHHHHhChHH
Confidence 99 66333 347899999999999997643 345566665 678877644 22 899999999987632
Q ss_pred -HHHHHHHHHHHH
Q 038830 295 -KEIKQNADKWRN 306 (335)
Q Consensus 295 -~~~r~~a~~l~~ 306 (335)
+.|++++++..+
T Consensus 347 ~~~~~~~~~~~~~ 359 (374)
T cd03817 347 RRRLSKNAEESAE 359 (374)
T ss_pred HHHHHHHHHHHHH
Confidence 334444444443
No 49
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.98 E-value=0.00016 Score=70.82 Aligned_cols=133 Identities=18% Similarity=0.212 Sum_probs=80.5
Q ss_pred cEEEEEeCCcccCC-HHHHHHHHHHHhhCCCcEE-EEEeCCCC-CcCCccchh-hcCCceEEEeecchh---hhccccCc
Q 038830 148 SVVYVSFGSMATLK-IEEMEELPCGLKASDKYFL-WVVRESEQ-SKLPENFSD-ETSQKGLVVNWCPQL---GVLAHEAT 220 (335)
Q Consensus 148 svvyvsfGS~~~~~-~~~~~~l~~~l~~~~~~fl-w~~~~~~~-~~l~~~~~~-~~~~~~~v~~w~pq~---~vL~h~~v 220 (335)
++.+++.|...... .+.+.+.+..|.+.+..+- ++++.+.. +.+.....+ .+.+++.+.+|+|+. .++..+++
T Consensus 222 ~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~~~~l~~~~~~~~l~~~V~~~G~~~~~el~~~l~~aDv 301 (406)
T PRK15427 222 PLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDADV 301 (406)
T ss_pred CeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECchhHHHHHHHHHHcCCCCeEEEeCCCCHHHHHHHHHhCCE
Confidence 44556667776322 2334444444444343442 33443321 111111111 133567888999875 68889999
Q ss_pred CeEEc--c-------CCc-chHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHc
Q 038830 221 GCFLT--H-------CGW-NSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILE 290 (335)
Q Consensus 221 ~~fIt--H-------gG~-nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~ 290 (335)
||. + =|. ++++||+++|+|+|+-...+ ....+.+. ..|+.+..+ +.+++.++|.++++
T Consensus 302 --~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v~~~-~~G~lv~~~-----d~~~la~ai~~l~~ 369 (406)
T PRK15427 302 --FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELVEAD-KSGWLVPEN-----DAQALAQRLAAFSQ 369 (406)
T ss_pred --EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhhcCC-CceEEeCCC-----CHHHHHHHHHHHHh
Confidence 664 2 233 67999999999999875432 34455555 578877654 78999999999998
Q ss_pred -CC
Q 038830 291 -GK 292 (335)
Q Consensus 291 -~~ 292 (335)
++
T Consensus 370 ~d~ 372 (406)
T PRK15427 370 LDT 372 (406)
T ss_pred CCH
Confidence 66
No 50
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=97.95 E-value=4.7e-05 Score=63.21 Aligned_cols=111 Identities=20% Similarity=0.275 Sum_probs=74.9
Q ss_pred cEEEEEeCCcccCC-HHH--HHHHHHHHhhCCC-cEEEEEeCCCCCcCCccchhhcCCceEEE---eecchh-hhccccC
Q 038830 148 SVVYVSFGSMATLK-IEE--MEELPCGLKASDK-YFLWVVRESEQSKLPENFSDETSQKGLVV---NWCPQL-GVLAHEA 219 (335)
Q Consensus 148 svvyvsfGS~~~~~-~~~--~~~l~~~l~~~~~-~flw~~~~~~~~~l~~~~~~~~~~~~~v~---~w~pq~-~vL~h~~ 219 (335)
..+||+-||..-.. ... -++..+.|.+.|. +.+..++.+. ...++....-.+..++.+ +|.|-. +..+.++
T Consensus 4 ~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~-~~~~d~~~~~~k~~gl~id~y~f~psl~e~I~~Ad 82 (170)
T KOG3349|consen 4 MTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQ-PFFGDPIDLIRKNGGLTIDGYDFSPSLTEDIRSAD 82 (170)
T ss_pred eEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCc-cCCCCHHHhhcccCCeEEEEEecCccHHHHHhhcc
Confidence 37999999976211 011 2456777777775 5566666542 222332221112223332 577874 7778899
Q ss_pred cCeEEccCCcchHHHHHhcCCCeeecCC----CCChhhhHHHHHHH
Q 038830 220 TGCFLTHCGWNSTLEALSLGVPMVAMPL----WTDQSTNSKYVMDV 261 (335)
Q Consensus 220 v~~fItHgG~nSv~Eal~~GVP~i~~P~----~~DQ~~Na~~v~~~ 261 (335)
+ +|+|+|+||++|.+..|+|.|+++- -.+|-.=|..+++.
T Consensus 83 l--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~e 126 (170)
T KOG3349|consen 83 L--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEE 126 (170)
T ss_pred E--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhc
Confidence 9 9999999999999999999999984 36788888888887
No 51
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.94 E-value=5.7e-05 Score=64.16 Aligned_cols=147 Identities=20% Similarity=0.275 Sum_probs=88.4
Q ss_pred CCCcEEEEEeCCcccCC-HHHHHHHHHHHhh--CCCcEEEEEeCCCC-CcCCccch-hhcCCceEEEeecc--hh-hhcc
Q 038830 145 ANGSVVYVSFGSMATLK-IEEMEELPCGLKA--SDKYFLWVVRESEQ-SKLPENFS-DETSQKGLVVNWCP--QL-GVLA 216 (335)
Q Consensus 145 ~~~svvyvsfGS~~~~~-~~~~~~l~~~l~~--~~~~flw~~~~~~~-~~l~~~~~-~~~~~~~~v~~w~p--q~-~vL~ 216 (335)
+++..+++..|+..... ...+.+++.-+.. ...-.+++++.... ..+..... .....+..+.++.+ +. .++.
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~ 91 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEYKKELKNLIEKLNLKENIIFLGYVPDDELDELYK 91 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCHHHHHHHHHHHTTCGTTEEEEESHSHHHHHHHHH
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccccccccccccccccccccccccccccccccccccc
Confidence 34557777788877532 3444444444432 22233444542211 01111010 12345778888887 33 8899
Q ss_pred ccCcCeEEcc----CCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 217 HEATGCFLTH----CGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 217 h~~v~~fItH----gG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
.+++ +|+. +..++++||+++|+|+|+.. ...+...+.+. ..|..+... +.+++.++|.++++++
T Consensus 92 ~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~~----~~~~~e~~~~~-~~g~~~~~~-----~~~~l~~~i~~~l~~~ 159 (172)
T PF00534_consen 92 SSDI--FVSPSRNEGFGLSLLEAMACGCPVIASD----IGGNNEIINDG-VNGFLFDPN-----DIEELADAIEKLLNDP 159 (172)
T ss_dssp HTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEES----STHHHHHSGTT-TSEEEESTT-----SHHHHHHHHHHHHHHH
T ss_pred ccee--ccccccccccccccccccccccceeecc----ccCCceeeccc-cceEEeCCC-----CHHHHHHHHHHHHCCH
Confidence 9999 7766 56679999999999999854 45556666666 678888743 8999999999999876
Q ss_pred cH-HHHHHHHHH
Q 038830 293 RD-KEIKQNADK 303 (335)
Q Consensus 293 ~~-~~~r~~a~~ 303 (335)
+. +.|.+++++
T Consensus 160 ~~~~~l~~~~~~ 171 (172)
T PF00534_consen 160 ELRQKLGKNARE 171 (172)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHhcC
Confidence 32 345555443
No 52
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=97.93 E-value=0.00033 Score=64.83 Aligned_cols=135 Identities=21% Similarity=0.240 Sum_probs=82.6
Q ss_pred CCcEEEEEeCCcccC-CHHHHHHHHHHHhh--CCCcEEEEEeCCCCCcCCccchhh--cCCceEEEeecchh-hhccccC
Q 038830 146 NGSVVYVSFGSMATL-KIEEMEELPCGLKA--SDKYFLWVVRESEQSKLPENFSDE--TSQKGLVVNWCPQL-GVLAHEA 219 (335)
Q Consensus 146 ~~svvyvsfGS~~~~-~~~~~~~l~~~l~~--~~~~flw~~~~~~~~~l~~~~~~~--~~~~~~v~~w~pq~-~vL~h~~ 219 (335)
++..+++..|+.... ..+.+.+.+..+.. .+..|+++-+.............. ...++.+.++..+. .+++.++
T Consensus 186 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad 265 (359)
T cd03808 186 EDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGFRDDVPELLAAAD 265 (359)
T ss_pred CCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeeccccHHHHHHhcc
Confidence 345677888887642 23445555555553 334544433322111111000111 22456666765554 7899999
Q ss_pred cCeEEccCC----cchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 220 TGCFLTHCG----WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 220 v~~fItHgG----~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
+ +|.-.. -++++||+++|+|+|+-+..+ +...+.+. +.|..+..+ +.+++.++|.+++.++
T Consensus 266 i--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i~~~-~~g~~~~~~-----~~~~~~~~i~~l~~~~ 330 (359)
T cd03808 266 V--FVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAVIDG-VNGFLVPPG-----DAEALADAIERLIEDP 330 (359)
T ss_pred E--EEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhhhcC-cceEEECCC-----CHHHHHHHHHHHHhCH
Confidence 8 665433 578999999999999865543 34555555 778877643 6899999999998876
No 53
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.92 E-value=0.00011 Score=69.66 Aligned_cols=81 Identities=25% Similarity=0.234 Sum_probs=62.2
Q ss_pred CCceEEEeecchh---hhccccCcCeEEcc----------CCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccce
Q 038830 200 SQKGLVVNWCPQL---GVLAHEATGCFLTH----------CGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGL 266 (335)
Q Consensus 200 ~~~~~v~~w~pq~---~vL~h~~v~~fItH----------gG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~ 266 (335)
.+++.+.+++|+. .+++.+++ ||.- |-.++++||+++|+|+|+-+..+ +...+.+. +.|.
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i~~~-~~g~ 316 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAVEDG-ETGL 316 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhheecC-CeeE
Confidence 4567777888764 67999998 5532 23579999999999999876543 66667666 7888
Q ss_pred eecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 267 KVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 267 ~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
.+... +.+++.++|.++++++
T Consensus 317 ~~~~~-----d~~~l~~~i~~l~~~~ 337 (367)
T cd05844 317 LVPEG-----DVAALAAALGRLLADP 337 (367)
T ss_pred EECCC-----CHHHHHHHHHHHHcCH
Confidence 87643 6799999999999876
No 54
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=97.91 E-value=0.00021 Score=66.11 Aligned_cols=82 Identities=26% Similarity=0.339 Sum_probs=62.3
Q ss_pred cCCceEEEeecchh---hhccccCcCeEEc----cCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCC
Q 038830 199 TSQKGLVVNWCPQL---GVLAHEATGCFLT----HCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPAD 271 (335)
Q Consensus 199 ~~~~~~v~~w~pq~---~vL~h~~v~~fIt----HgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~ 271 (335)
..+++.+.+++++. .++..+++ +|. -+.-++++||+++|+|+|+.+. ......+.+. +.|..+...
T Consensus 254 ~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~~-~~g~~~~~~ 326 (374)
T cd03801 254 LGDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVEDG-ETGLLVPPG 326 (374)
T ss_pred CCcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcCC-cceEEeCCC
Confidence 34677788999644 68999998 663 2456799999999999999765 3355556555 778777643
Q ss_pred CCCCcCHHHHHHHHHHHHcCC
Q 038830 272 EKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 272 ~~~~~~~~~l~~~i~~ll~~~ 292 (335)
+.+++.++|.+++.++
T Consensus 327 -----~~~~l~~~i~~~~~~~ 342 (374)
T cd03801 327 -----DPEALAEAILRLLDDP 342 (374)
T ss_pred -----CHHHHHHHHHHHHcCh
Confidence 5899999999999876
No 55
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.90 E-value=0.00022 Score=70.53 Aligned_cols=137 Identities=18% Similarity=0.234 Sum_probs=78.2
Q ss_pred CCCcEEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhh------cCCceEEEeecchh---hhc
Q 038830 145 ANGSVVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDE------TSQKGLVVNWCPQL---GVL 215 (335)
Q Consensus 145 ~~~svvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~------~~~~~~v~~w~pq~---~vL 215 (335)
++..|+|.||.+....+++.+.-.++-|++.+...+|..+..... ...+.++ -++|..+.++.|+. ..+
T Consensus 282 p~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~--~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl~~~ 359 (468)
T PF13844_consen 282 PEDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASG--EARLRRRFAAHGVDPDRIIFSPVAPREEHLRRY 359 (468)
T ss_dssp -SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTH--HHHHHHHHHHTTS-GGGEEEEE---HHHHHHHG
T ss_pred CCCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHH--HHHHHHHHHHcCCChhhEEEcCCCCHHHHHHHh
Confidence 456799999999999999999988999999999999998754211 1112111 12566666777765 345
Q ss_pred cccCcCeEEc---cCCcchHHHHHhcCCCeeecCCCCC-hhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcC
Q 038830 216 AHEATGCFLT---HCGWNSTLEALSLGVPMVAMPLWTD-QSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEG 291 (335)
Q Consensus 216 ~h~~v~~fIt---HgG~nSv~Eal~~GVP~i~~P~~~D-Q~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 291 (335)
...|+ ++- ..|.+|++||+++|||+|++|--.- ...-+..+... |+.-.+.. +.++-.+...++-++
T Consensus 360 ~~~DI--~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~l-Gl~ElIA~------s~~eYv~~Av~La~D 430 (468)
T PF13844_consen 360 QLADI--CLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRAL-GLPELIAD------SEEEYVEIAVRLATD 430 (468)
T ss_dssp GG-SE--EE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHH-T-GGGB-S------SHHHHHHHHHHHHH-
T ss_pred hhCCE--EeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHc-CCchhcCC------CHHHHHHHHHHHhCC
Confidence 56777 653 4688999999999999999994322 23344455555 88766642 456655555466666
Q ss_pred C
Q 038830 292 K 292 (335)
Q Consensus 292 ~ 292 (335)
.
T Consensus 431 ~ 431 (468)
T PF13844_consen 431 P 431 (468)
T ss_dssp H
T ss_pred H
Confidence 5
No 56
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=97.90 E-value=0.0017 Score=62.16 Aligned_cols=132 Identities=17% Similarity=0.190 Sum_probs=82.1
Q ss_pred cEEEEEeCCcccC-CHHHHHHHHHHHhh--CCCcEEEEEeCCCCCcCCc---c---chhh--cCCceEEEeecchh---h
Q 038830 148 SVVYVSFGSMATL-KIEEMEELPCGLKA--SDKYFLWVVRESEQSKLPE---N---FSDE--TSQKGLVVNWCPQL---G 213 (335)
Q Consensus 148 svvyvsfGS~~~~-~~~~~~~l~~~l~~--~~~~flw~~~~~~~~~l~~---~---~~~~--~~~~~~v~~w~pq~---~ 213 (335)
..+++..|+.... ..+.+.+.+..+.. .+..++++-+... ...+. . +.+. ..++..+.+|+|+. .
T Consensus 220 ~~~i~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 298 (398)
T cd03800 220 KPRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRD-DILAMDEEELRELARELGVIDRVDFPGRVSREDLPA 298 (398)
T ss_pred CcEEEEEcccccccCHHHHHHHHHHHHHhCCCeEEEEEECCCC-cchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHH
Confidence 3556677877632 23334444444432 2455555543321 11111 0 1111 23567778999876 5
Q ss_pred hccccCcCeEEccC----CcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHH
Q 038830 214 VLAHEATGCFLTHC----GWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEIL 289 (335)
Q Consensus 214 vL~h~~v~~fItHg----G~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll 289 (335)
+++.+++ ++... -.++++||+++|+|+|+-+..+ +...+.+. +.|..+... +.+++.++|.+++
T Consensus 299 ~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i~~~-~~g~~~~~~-----~~~~l~~~i~~l~ 366 (398)
T cd03800 299 LYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIVVDG-VTGLLVDPR-----DPEALAAALRRLL 366 (398)
T ss_pred HHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHccCC-CCeEEeCCC-----CHHHHHHHHHHHH
Confidence 6889999 76432 2368999999999999876433 55566666 788887644 6899999999999
Q ss_pred cCC
Q 038830 290 EGK 292 (335)
Q Consensus 290 ~~~ 292 (335)
+++
T Consensus 367 ~~~ 369 (398)
T cd03800 367 TDP 369 (398)
T ss_pred hCH
Confidence 876
No 57
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=97.90 E-value=0.00032 Score=68.70 Aligned_cols=162 Identities=15% Similarity=0.209 Sum_probs=94.2
Q ss_pred cEEEEEeCCcccCC-HHHHHHHHHHHhhC--CCcEEEEEeCCCCCcCCccchhh-----cCCceEEEeecchh---hhcc
Q 038830 148 SVVYVSFGSMATLK-IEEMEELPCGLKAS--DKYFLWVVRESEQSKLPENFSDE-----TSQKGLVVNWCPQL---GVLA 216 (335)
Q Consensus 148 svvyvsfGS~~~~~-~~~~~~l~~~l~~~--~~~flw~~~~~~~~~l~~~~~~~-----~~~~~~v~~w~pq~---~vL~ 216 (335)
...+++.|...... .+.+.+.+..+... +..+.|++-+... ..+.+.+. ..+++.+.+|+++. .++.
T Consensus 230 ~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~--~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~ 307 (407)
T cd04946 230 TLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGP--LEDTLKELAESKPENISVNFTGELSNSEVYKLYK 307 (407)
T ss_pred CEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCch--HHHHHHHHHHhcCCCceEEEecCCChHHHHHHHh
Confidence 45566678776433 33343444444333 2467676443211 11112111 12456777999976 4555
Q ss_pred ccCcCeEEccCC----cchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 217 HEATGCFLTHCG----WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 217 h~~v~~fItHgG----~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
.++..+|+...- -++++||+++|+|+|+-... .....+.+. +.|..+... -+.+++.++|.++++++
T Consensus 308 ~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vg----g~~e~i~~~-~~G~l~~~~----~~~~~la~~I~~ll~~~ 378 (407)
T cd04946 308 ENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVG----GTPEIVDNG-GNGLLLSKD----PTPNELVSSLSKFIDNE 378 (407)
T ss_pred hcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCC----CcHHHhcCC-CcEEEeCCC----CCHHHHHHHHHHHHhCH
Confidence 444444776553 46899999999999986543 345556554 578877642 36899999999999876
Q ss_pred cHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 038830 293 RDKEIKQNADKWRNFAKEAVAKGGSSDKNIDDFV 326 (335)
Q Consensus 293 ~~~~~r~~a~~l~~~~~~a~~~ggss~~~l~~~v 326 (335)
+ .+ .++++.+++.+.+.-+...+..+|+
T Consensus 379 ~---~~---~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 379 E---EY---QTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred H---HH---HHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 2 22 2344444544444555556666554
No 58
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=97.87 E-value=0.00014 Score=68.30 Aligned_cols=143 Identities=20% Similarity=0.214 Sum_probs=84.6
Q ss_pred CcEEEEEeCCcccC-CHHHHHHHHHHHhhC--CCcEEEEEeCCCCCcCCccchhh--cCCceEEEeecchh---hhcccc
Q 038830 147 GSVVYVSFGSMATL-KIEEMEELPCGLKAS--DKYFLWVVRESEQSKLPENFSDE--TSQKGLVVNWCPQL---GVLAHE 218 (335)
Q Consensus 147 ~svvyvsfGS~~~~-~~~~~~~l~~~l~~~--~~~flw~~~~~~~~~l~~~~~~~--~~~~~~v~~w~pq~---~vL~h~ 218 (335)
.++.++.+|+.... ..+.+.+.+..+... +..++++-+......+. .+.++ ..+++.+.+++|+. .+++++
T Consensus 178 ~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~~~~~-~~~~~~~~~~~v~~~g~~~~~~l~~~~~~a 256 (355)
T cd03799 178 EPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPLRDELE-ALIAELGLEDRVTLLGAKSQEEVRELLRAA 256 (355)
T ss_pred CCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCccHHHHH-HHHHHcCCCCeEEECCcCChHHHHHHHHhC
Confidence 34566777876532 234455555555443 34444432222111111 11111 23567778898754 788889
Q ss_pred CcCeEEcc----------CCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHH
Q 038830 219 ATGCFLTH----------CGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEI 288 (335)
Q Consensus 219 ~v~~fItH----------gG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~l 288 (335)
++ +|.- +.-++++||+++|+|+|+.+..+ ....+.+. ..|..+..+ +.+++.++|.++
T Consensus 257 di--~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i~~~-~~g~~~~~~-----~~~~l~~~i~~~ 324 (355)
T cd03799 257 DL--FVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELVEDG-ETGLLVPPG-----DPEALADAIERL 324 (355)
T ss_pred CE--EEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhhhCC-CceEEeCCC-----CHHHHHHHHHHH
Confidence 98 5552 23478999999999999876532 22344443 578777643 789999999999
Q ss_pred HcCCcH-HHHHHHHH
Q 038830 289 LEGKRD-KEIKQNAD 302 (335)
Q Consensus 289 l~~~~~-~~~r~~a~ 302 (335)
+++++. .+++++++
T Consensus 325 ~~~~~~~~~~~~~a~ 339 (355)
T cd03799 325 LDDPELRREMGEAGR 339 (355)
T ss_pred HhCHHHHHHHHHHHH
Confidence 987632 33444443
No 59
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=97.84 E-value=0.001 Score=62.77 Aligned_cols=81 Identities=19% Similarity=0.108 Sum_probs=58.5
Q ss_pred CCceEEEeecc-hh---hhccccCcCeEEccCC----cchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCC
Q 038830 200 SQKGLVVNWCP-QL---GVLAHEATGCFLTHCG----WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPAD 271 (335)
Q Consensus 200 ~~~~~v~~w~p-q~---~vL~h~~v~~fItHgG----~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~ 271 (335)
..++...+|++ +. .+++.+++ +|.-.. .++++||+++|+|+|+....+ ....+.+. +.|..+..
T Consensus 243 ~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~----~~e~~~~~-~~g~~~~~- 314 (365)
T cd03825 243 PFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVGG----IPDIVDHG-VTGYLAKP- 314 (365)
T ss_pred CCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCCC----ChhheeCC-CceEEeCC-
Confidence 45667778888 33 67899999 777543 589999999999999865432 22333333 46766653
Q ss_pred CCCCcCHHHHHHHHHHHHcCC
Q 038830 272 EKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 272 ~~~~~~~~~l~~~i~~ll~~~ 292 (335)
.+.+++.+++.++++++
T Consensus 315 ----~~~~~~~~~l~~l~~~~ 331 (365)
T cd03825 315 ----GDPEDLAEGIEWLLADP 331 (365)
T ss_pred ----CCHHHHHHHHHHHHhCH
Confidence 36899999999999876
No 60
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=97.78 E-value=0.00062 Score=63.22 Aligned_cols=134 Identities=19% Similarity=0.158 Sum_probs=82.5
Q ss_pred CcEEEEEeCCcccC-CHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhh-----cCCceEEEeecchh---hhccc
Q 038830 147 GSVVYVSFGSMATL-KIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDE-----TSQKGLVVNWCPQL---GVLAH 217 (335)
Q Consensus 147 ~svvyvsfGS~~~~-~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~-----~~~~~~v~~w~pq~---~vL~h 217 (335)
...+++..|+.... ..+.+.+.+..+...+..+.+.+-+.... .+.+.+. ..+++.+.+++++. .++..
T Consensus 201 ~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~--~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ 278 (377)
T cd03798 201 DKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPL--REALEALAAELGLEDRVTFLGAVPHEEVPAYYAA 278 (377)
T ss_pred CceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcc--hHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHh
Confidence 44667777876642 23444455555544333444433322111 1111111 23567778899865 67888
Q ss_pred cCcCeEEc--cCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 218 EATGCFLT--HCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 218 ~~v~~fIt--HgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
+++..+.+ -+.-++++||+++|+|+|+-+..+ ....+.+. +.|..+... +.+++.+++.++++++
T Consensus 279 ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~----~~~~~~~~-~~g~~~~~~-----~~~~l~~~i~~~~~~~ 345 (377)
T cd03798 279 ADVFVLPSLREGFGLVLLEAMACGLPVVATDVGG----IPEIITDG-ENGLLVPPG-----DPEALAEAILRLLADP 345 (377)
T ss_pred cCeeecchhhccCChHHHHHHhcCCCEEEecCCC----hHHHhcCC-cceeEECCC-----CHHHHHHHHHHHhcCc
Confidence 88822222 245678999999999999876533 44556665 667777644 7899999999999887
No 61
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=97.78 E-value=0.001 Score=61.78 Aligned_cols=131 Identities=21% Similarity=0.264 Sum_probs=75.8
Q ss_pred CcEEEEEeCCcccCC-HHHHHHHHHHHhh--CCCcEEEEEeCCCCCcCCccchh---hcCCceEEEeecchh-hhccccC
Q 038830 147 GSVVYVSFGSMATLK-IEEMEELPCGLKA--SDKYFLWVVRESEQSKLPENFSD---ETSQKGLVVNWCPQL-GVLAHEA 219 (335)
Q Consensus 147 ~svvyvsfGS~~~~~-~~~~~~l~~~l~~--~~~~flw~~~~~~~~~l~~~~~~---~~~~~~~v~~w~pq~-~vL~h~~ 219 (335)
...+++.+|+..... .+.+.+.+..+.. .+..++++-........ ..... ...+++.+.+...+. .+++.++
T Consensus 192 ~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~-~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad 270 (365)
T cd03807 192 DTFLIGIVARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPDRANL-ELLALKELGLEDKVILLGERSDVPALLNALD 270 (365)
T ss_pred CCeEEEEecccchhcCHHHHHHHHHHHHHhCCCeEEEEecCCcchhHH-HHHHHHhcCCCceEEEccccccHHHHHHhCC
Confidence 345667778776422 2333333333333 24455544322211111 11111 122345555544443 7899999
Q ss_pred cCeEEccCCc----chHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 220 TGCFLTHCGW----NSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 220 v~~fItHgG~----nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
+ +|....+ ++++||+++|+|+|+-.. ..+...+.+ .|..+..+ +.+++.++|.++++++
T Consensus 271 i--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~----~~~~e~~~~---~g~~~~~~-----~~~~l~~~i~~l~~~~ 333 (365)
T cd03807 271 V--FVLSSLSEGFPNVLLEAMACGLPVVATDV----GDNAELVGD---TGFLVPPG-----DPEALAEAIEALLADP 333 (365)
T ss_pred E--EEeCCccccCCcHHHHHHhcCCCEEEcCC----CChHHHhhc---CCEEeCCC-----CHHHHHHHHHHHHhCh
Confidence 8 7765543 799999999999998554 334555544 35666543 6899999999999876
No 62
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=97.77 E-value=0.00034 Score=67.02 Aligned_cols=160 Identities=14% Similarity=0.212 Sum_probs=92.4
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHhhCC--CcEEEEEeCCCC-CcCCccchh--hcCCceEEEeecchh-----hhccc
Q 038830 148 SVVYVSFGSMATLKIEEMEELPCGLKASD--KYFLWVVRESEQ-SKLPENFSD--ETSQKGLVVNWCPQL-----GVLAH 217 (335)
Q Consensus 148 svvyvsfGS~~~~~~~~~~~l~~~l~~~~--~~flw~~~~~~~-~~l~~~~~~--~~~~~~~v~~w~pq~-----~vL~h 217 (335)
..+++..|.......+.+..+++++.... ..++ .++.+.. +.+.+ ..+ ..++++.+.+|.++. ..++.
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~-ivG~g~~~~~l~~-~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~ 257 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLH-IIGDGSDFEKCKA-YSRELGIEQRIIWHGWQSQPWEVVQQKIKN 257 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEE-EEeCCccHHHHHH-HHHHcCCCCeEEEecccCCcHHHHHHHHhc
Confidence 34566777765322334556666665543 3443 3443321 11111 111 134577777887542 34555
Q ss_pred cCcCeEEc--c--CCcchHHHHHhcCCCeeecC-CCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 218 EATGCFLT--H--CGWNSTLEALSLGVPMVAMP-LWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 218 ~~v~~fIt--H--gG~nSv~Eal~~GVP~i~~P-~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
+++ ||. + +--++++||+++|+|+|+.- ..+ ....+.+. ..|..+..+ +.+++.++|.++++++
T Consensus 258 ~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv~~~-~~G~lv~~~-----d~~~la~~i~~l~~~~ 325 (359)
T PRK09922 258 VSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDIIKPG-LNGELYTPG-----NIDEFVGKLNKVISGE 325 (359)
T ss_pred CcE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHccCC-CceEEECCC-----CHHHHHHHHHHHHhCc
Confidence 677 554 3 22579999999999999875 322 22345554 568777643 7999999999999887
Q ss_pred c---HHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHh
Q 038830 293 R---DKEIKQNADKWRNFAKEAVAKGGSSDKNIDDFVANLI 330 (335)
Q Consensus 293 ~---~~~~r~~a~~l~~~~~~a~~~ggss~~~l~~~v~~~~ 330 (335)
+ ...++++++++.... ..+.+.+..+.+.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~ 357 (359)
T PRK09922 326 VKYQHDAIPNSIERFYEVL---------YFKNLNNALFSKL 357 (359)
T ss_pred ccCCHHHHHHHHHHhhHHH---------HHHHHHHHHHHHh
Confidence 4 244555555555433 2345555555544
No 63
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=97.77 E-value=0.00029 Score=64.91 Aligned_cols=141 Identities=18% Similarity=0.264 Sum_probs=80.9
Q ss_pred cEEEEEeCCcccC-CHHHHHHHHHHHhhC--CCcEEEEEeCCCC-CcCCccchhh--cCCceEEEeecchh-hhccccCc
Q 038830 148 SVVYVSFGSMATL-KIEEMEELPCGLKAS--DKYFLWVVRESEQ-SKLPENFSDE--TSQKGLVVNWCPQL-GVLAHEAT 220 (335)
Q Consensus 148 svvyvsfGS~~~~-~~~~~~~l~~~l~~~--~~~flw~~~~~~~-~~l~~~~~~~--~~~~~~v~~w~pq~-~vL~h~~v 220 (335)
..+++.+|+.... ..+.+.+.+..+.+. +..++++ +.... ..+.+ ..++ ..+++.+.++..+. .++..+++
T Consensus 178 ~~~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~-G~~~~~~~~~~-~~~~~~~~~~v~~~g~~~~~~~~~~~ad~ 255 (348)
T cd03820 178 SKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIV-GDGPEREALEA-LIKELGLEDRVILLGFTKNIEEYYAKASI 255 (348)
T ss_pred CcEEEEEEeeccccCHHHHHHHHHHHHhcCCCeEEEEE-eCCCCHHHHHH-HHHHcCCCCeEEEcCCcchHHHHHHhCCE
Confidence 3456666776542 234455555555432 3344433 32211 11111 1111 22345555663333 78899988
Q ss_pred CeEEccCC----cchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhc-cceeecCCCCCCcCHHHHHHHHHHHHcCCcH-
Q 038830 221 GCFLTHCG----WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWK-MGLKVPADEKGIVRREAIAHCISEILEGKRD- 294 (335)
Q Consensus 221 ~~fItHgG----~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g-~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~- 294 (335)
+|.-.. -++++||+++|+|+|+.+..+.+ ..+.+. + .|..++.. +.+++.++|.+++++++.
T Consensus 256 --~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~----~~~~~~-~~~g~~~~~~-----~~~~~~~~i~~ll~~~~~~ 323 (348)
T cd03820 256 --FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGP----SEIIED-GVNGLLVPNG-----DVEALAEALLRLMEDEELR 323 (348)
T ss_pred --EEeCccccccCHHHHHHHHcCCCEEEecCCCch----Hhhhcc-CcceEEeCCC-----CHHHHHHHHHHHHcCHHHH
Confidence 665542 47899999999999997654433 233344 4 78777643 679999999999988732
Q ss_pred HHHHHHHH
Q 038830 295 KEIKQNAD 302 (335)
Q Consensus 295 ~~~r~~a~ 302 (335)
+.++++++
T Consensus 324 ~~~~~~~~ 331 (348)
T cd03820 324 KRMGANAR 331 (348)
T ss_pred HHHHHHHH
Confidence 33444443
No 64
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=97.77 E-value=0.00012 Score=69.79 Aligned_cols=132 Identities=20% Similarity=0.200 Sum_probs=82.8
Q ss_pred CCcEEEEEeCCcccC-CHHHHHHHHHHHhhCCC-cEEEEEeCCC--CCcCCccchhhc---CCceEEEeecchh---hhc
Q 038830 146 NGSVVYVSFGSMATL-KIEEMEELPCGLKASDK-YFLWVVRESE--QSKLPENFSDET---SQKGLVVNWCPQL---GVL 215 (335)
Q Consensus 146 ~~svvyvsfGS~~~~-~~~~~~~l~~~l~~~~~-~flw~~~~~~--~~~l~~~~~~~~---~~~~~v~~w~pq~---~vL 215 (335)
+++++++++|..... ..+.+..+++++..... .+..++.... ...+.+. ..+. .+++.+.+..+.. .++
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~~~~~l~~~-~~~~~~~~~~v~~~~~~~~~~~~~l~ 275 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPRTRPRIREA-GLEFLGHHPNVLLISPLGYLYFLLLL 275 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCChHHHHHHH-HHhhccCCCCEEEECCcCHHHHHHHH
Confidence 455778888887643 34567777777765432 2333332221 1112111 1111 2456666544433 668
Q ss_pred cccCcCeEEccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 216 AHEATGCFLTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 216 ~h~~v~~fItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
..+++ ||+..| +.+.||+++|+|+|..+-. |. +..+.+. |+++.+. -+.+++.++|.++++++
T Consensus 276 ~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~~-g~~~~~~------~~~~~i~~~i~~ll~~~ 338 (363)
T cd03786 276 KNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVES-GTNVLVG------TDPEAILAAIEKLLSDE 338 (363)
T ss_pred HcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhhe-eeEEecC------CCHHHHHHHHHHHhcCc
Confidence 88999 999999 7788999999999998632 22 4456666 7665553 14789999999999876
No 65
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.74 E-value=0.00079 Score=63.95 Aligned_cols=144 Identities=21% Similarity=0.221 Sum_probs=84.7
Q ss_pred cEEEEEeCCcccCC-HHHHHHHHHHHhh-CCCcEEEEEeCCCCCcCCccchhh--cCCceEEEeecchh-hhccccCcCe
Q 038830 148 SVVYVSFGSMATLK-IEEMEELPCGLKA-SDKYFLWVVRESEQSKLPENFSDE--TSQKGLVVNWCPQL-GVLAHEATGC 222 (335)
Q Consensus 148 svvyvsfGS~~~~~-~~~~~~l~~~l~~-~~~~flw~~~~~~~~~l~~~~~~~--~~~~~~v~~w~pq~-~vL~h~~v~~ 222 (335)
..+++.+|...... .+.+.+.+..+.. .+..++++-.......+.+ ..++ ..+++.+.++.++. .+++.+++
T Consensus 197 ~~~il~~g~l~~~K~~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~-~~~~~~~~~~v~~~g~~~~~~~~~~~~d~-- 273 (371)
T cd04962 197 EKVLIHISNFRPVKRIDDVIRIFAKVRKEVPARLLLVGDGPERSPAER-LARELGLQDDVLFLGKQDHVEELLSIADL-- 273 (371)
T ss_pred CeEEEEecccccccCHHHHHHHHHHHHhcCCceEEEEcCCcCHHHHHH-HHHHcCCCceEEEecCcccHHHHHHhcCE--
Confidence 35666677766322 2333333333332 3455554432221111111 1111 23466777777665 78999998
Q ss_pred EEcc----CCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCCcH-HHH
Q 038830 223 FLTH----CGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGKRD-KEI 297 (335)
Q Consensus 223 fItH----gG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~-~~~ 297 (335)
+|.- +.-++++||+++|+|+|+-... ..+..+.+. ..|..++.+ +.+++.+++.+++++++. .+|
T Consensus 274 ~v~ps~~E~~~~~~~EAma~g~PvI~s~~~----~~~e~i~~~-~~G~~~~~~-----~~~~l~~~i~~l~~~~~~~~~~ 343 (371)
T cd04962 274 FLLPSEKESFGLAALEAMACGVPVVASNAG----GIPEVVKHG-ETGFLVDVG-----DVEAMAEYALSLLEDDELWQEF 343 (371)
T ss_pred EEeCCCcCCCccHHHHHHHcCCCEEEeCCC----CchhhhcCC-CceEEcCCC-----CHHHHHHHHHHHHhCHHHHHHH
Confidence 6622 3356999999999999996543 355666665 567776543 689999999999987632 445
Q ss_pred HHHHHHH
Q 038830 298 KQNADKW 304 (335)
Q Consensus 298 r~~a~~l 304 (335)
++++++.
T Consensus 344 ~~~~~~~ 350 (371)
T cd04962 344 SRAARNR 350 (371)
T ss_pred HHHHHHH
Confidence 5555554
No 66
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=97.73 E-value=0.0001 Score=70.08 Aligned_cols=136 Identities=14% Similarity=0.202 Sum_probs=87.5
Q ss_pred EEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchh---hhccccCcCeEEccC
Q 038830 151 YVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQL---GVLAHEATGCFLTHC 227 (335)
Q Consensus 151 yvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~---~vL~h~~v~~fItHg 227 (335)
++..|++.. .+.+..++++++..+.+++++-.... .+.+.+...+++.+.+++|+. .+++.+++-.+-++-
T Consensus 198 il~~G~~~~--~K~~~~li~a~~~~~~~l~ivG~g~~----~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~e 271 (351)
T cd03804 198 YLSVGRLVP--YKRIDLAIEAFNKLGKRLVVIGDGPE----LDRLRAKAGPNVTFLGRVSDEELRDLYARARAFLFPAEE 271 (351)
T ss_pred EEEEEcCcc--ccChHHHHHHHHHCCCcEEEEECChh----HHHHHhhcCCCEEEecCCCHHHHHHHHHhCCEEEECCcC
Confidence 445577663 23355667777766677655433221 122333455788889999984 688899983333443
Q ss_pred Cc-chHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC--cHHHHHHHHH
Q 038830 228 GW-NSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK--RDKEIKQNAD 302 (335)
Q Consensus 228 G~-nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~r~~a~ 302 (335)
|+ .+++||+++|+|+|+....+ ....+.+. +.|..+..+ +.+++.++|.++++++ .++.++++++
T Consensus 272 ~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~~-~~G~~~~~~-----~~~~la~~i~~l~~~~~~~~~~~~~~~~ 339 (351)
T cd03804 272 DFGIVPVEAMASGTPVIAYGKGG----ALETVIDG-VTGILFEEQ-----TVESLAAAVERFEKNEDFDPQAIRAHAE 339 (351)
T ss_pred CCCchHHHHHHcCCCEEEeCCCC----CcceeeCC-CCEEEeCCC-----CHHHHHHHHHHHHhCcccCHHHHHHHHH
Confidence 43 56789999999999976533 33445555 678887644 6888999999999876 2344444443
No 67
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=97.71 E-value=0.00029 Score=67.72 Aligned_cols=155 Identities=15% Similarity=0.225 Sum_probs=88.8
Q ss_pred CcEEEEEeCCcccCCHHHHHHHHHHHhhC-----CCcEEEEEeCCCCCcCCccchhh--cCCceEEEeecch---hhhcc
Q 038830 147 GSVVYVSFGSMATLKIEEMEELPCGLKAS-----DKYFLWVVRESEQSKLPENFSDE--TSQKGLVVNWCPQ---LGVLA 216 (335)
Q Consensus 147 ~svvyvsfGS~~~~~~~~~~~l~~~l~~~-----~~~flw~~~~~~~~~l~~~~~~~--~~~~~~v~~w~pq---~~vL~ 216 (335)
+.+++++++-.... .+.+..+++++... +.++++...++. .....+.+. ..+++.+.+..++ ..+++
T Consensus 197 ~~~vl~~~hr~~~~-~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~ 273 (365)
T TIGR00236 197 KRYILLTLHRRENV-GEPLENIFKAIREIVEEFEDVQIVYPVHLNP--VVREPLHKHLGDSKRVHLIEPLEYLDFLNLAA 273 (365)
T ss_pred CCEEEEecCchhhh-hhHHHHHHHHHHHHHHHCCCCEEEEECCCCh--HHHHHHHHHhCCCCCEEEECCCChHHHHHHHH
Confidence 34566655432221 13466666665442 456666544321 111111111 2246677665544 36778
Q ss_pred ccCcCeEEccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCCcHHH
Q 038830 217 HEATGCFLTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGKRDKE 296 (335)
Q Consensus 217 h~~v~~fItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~ 296 (335)
++++ +|+-.|. .+.||+++|+|+|..+-.++++. +.+. |.+..+. -+.++|.+++.++++++ .
T Consensus 274 ~ad~--vv~~Sg~-~~~EA~a~g~PvI~~~~~~~~~e----~~~~-g~~~lv~------~d~~~i~~ai~~ll~~~---~ 336 (365)
T TIGR00236 274 NSHL--ILTDSGG-VQEEAPSLGKPVLVLRDTTERPE----TVEA-GTNKLVG------TDKENITKAAKRLLTDP---D 336 (365)
T ss_pred hCCE--EEECChh-HHHHHHHcCCCEEECCCCCCChH----HHhc-CceEEeC------CCHHHHHHHHHHHHhCh---H
Confidence 8888 9998765 47999999999999876555442 3345 6666553 26899999999999876 4
Q ss_pred HHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 038830 297 IKQNADKWRNFAKEAVAKGGSSDKNIDDF 325 (335)
Q Consensus 297 ~r~~a~~l~~~~~~a~~~ggss~~~l~~~ 325 (335)
.+++..+ ... ...+|+++.+-.+.+
T Consensus 337 ~~~~~~~---~~~-~~g~~~a~~ri~~~l 361 (365)
T TIGR00236 337 EYKKMSN---ASN-PYGDGEASERIVEEL 361 (365)
T ss_pred HHHHhhh---cCC-CCcCchHHHHHHHHH
Confidence 4444322 211 123455655544443
No 68
>PRK10307 putative glycosyl transferase; Provisional
Probab=97.71 E-value=0.0008 Score=65.64 Aligned_cols=114 Identities=14% Similarity=0.156 Sum_probs=72.5
Q ss_pred CceEEEeecchh---hhccccCcCeEEccCCc------chHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCC
Q 038830 201 QKGLVVNWCPQL---GVLAHEATGCFLTHCGW------NSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPAD 271 (335)
Q Consensus 201 ~~~~v~~w~pq~---~vL~h~~v~~fItHgG~------nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~ 271 (335)
+++.+.+|+|+. .+++.+++..+.++.+. +.+.|++++|+|+|+-...+.. ....+. +.|+.+..+
T Consensus 284 ~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i~---~~G~~~~~~ 358 (412)
T PRK10307 284 PNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLVE---GIGVCVEPE 358 (412)
T ss_pred CceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHHh---CCcEEeCCC
Confidence 467777888865 68999999666666443 2478999999999998654321 112232 568877644
Q ss_pred CCCCcCHHHHHHHHHHHHcCCc-HHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhh
Q 038830 272 EKGIVRREAIAHCISEILEGKR-DKEIKQNADKWRNFAKEAVAKGGSSDKNIDDFVANLIS 331 (335)
Q Consensus 272 ~~~~~~~~~l~~~i~~ll~~~~-~~~~r~~a~~l~~~~~~a~~~ggss~~~l~~~v~~~~~ 331 (335)
+.++++++|.+++++++ .+.|++++++.. .+-=+.....+++++.+.+
T Consensus 359 -----d~~~la~~i~~l~~~~~~~~~~~~~a~~~~-------~~~fs~~~~~~~~~~~~~~ 407 (412)
T PRK10307 359 -----SVEALVAAIAALARQALLRPKLGTVAREYA-------ERTLDKENVLRQFIADIRG 407 (412)
T ss_pred -----CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-------HHHcCHHHHHHHHHHHHHH
Confidence 68999999999998763 244555554433 2223334445555555443
No 69
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.70 E-value=0.00066 Score=65.05 Aligned_cols=80 Identities=19% Similarity=0.218 Sum_probs=58.1
Q ss_pred CceEEEeecchh-hhccccCcCeEE--cc--CCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCC
Q 038830 201 QKGLVVNWCPQL-GVLAHEATGCFL--TH--CGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGI 275 (335)
Q Consensus 201 ~~~~v~~w~pq~-~vL~h~~v~~fI--tH--gG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~ 275 (335)
+++.+.++..+. .+|+.+++ || |+ |--++++||+++|+|+|+-... .+...+.+. ..|..+..+
T Consensus 255 ~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~----g~~e~i~~~-~~g~~~~~~---- 323 (374)
T TIGR03088 255 HLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVG----GNPELVQHG-VTGALVPPG---- 323 (374)
T ss_pred ceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCC----CcHHHhcCC-CceEEeCCC----
Confidence 344555554444 88999999 66 33 3357999999999999997653 355566555 668777644
Q ss_pred cCHHHHHHHHHHHHcCC
Q 038830 276 VRREAIAHCISEILEGK 292 (335)
Q Consensus 276 ~~~~~l~~~i~~ll~~~ 292 (335)
+.+++.++|.++++++
T Consensus 324 -d~~~la~~i~~l~~~~ 339 (374)
T TIGR03088 324 -DAVALARALQPYVSDP 339 (374)
T ss_pred -CHHHHHHHHHHHHhCH
Confidence 6899999999999876
No 70
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.69 E-value=0.0023 Score=62.07 Aligned_cols=84 Identities=13% Similarity=0.189 Sum_probs=60.6
Q ss_pred cCCceEEEeecchh---hhccccCcCeEEccCCc-----chHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecC
Q 038830 199 TSQKGLVVNWCPQL---GVLAHEATGCFLTHCGW-----NSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPA 270 (335)
Q Consensus 199 ~~~~~~v~~w~pq~---~vL~h~~v~~fItHgG~-----nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~ 270 (335)
...+..+.+++|+. .+++.+++ ||....| ++++||+++|+|+|+.... .+...+.+. ..|..+..
T Consensus 255 l~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~g----g~~Eiv~~~-~~G~~l~~ 327 (380)
T PRK15484 255 IGDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKG----GITEFVLEG-ITGYHLAE 327 (380)
T ss_pred cCCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCC----CcHhhcccC-CceEEEeC
Confidence 34566777888754 67999999 6653332 6789999999999997653 244555555 66764432
Q ss_pred CCCCCcCHHHHHHHHHHHHcCCc
Q 038830 271 DEKGIVRREAIAHCISEILEGKR 293 (335)
Q Consensus 271 ~~~~~~~~~~l~~~i~~ll~~~~ 293 (335)
. .+.+++.++|.+++++++
T Consensus 328 ~----~d~~~la~~I~~ll~d~~ 346 (380)
T PRK15484 328 P----MTSDSIISDINRTLADPE 346 (380)
T ss_pred C----CCHHHHHHHHHHHHcCHH
Confidence 1 378999999999998873
No 71
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=97.69 E-value=0.0016 Score=61.03 Aligned_cols=93 Identities=18% Similarity=0.328 Sum_probs=62.4
Q ss_pred CCceEEEe-ecchh---hhccccCcCeEEcc----CCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCC
Q 038830 200 SQKGLVVN-WCPQL---GVLAHEATGCFLTH----CGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPAD 271 (335)
Q Consensus 200 ~~~~~v~~-w~pq~---~vL~h~~v~~fItH----gG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~ 271 (335)
.+++.+.+ |+|+. .+++.+++..+-++ +-.++++||+++|+|+|+-+..+ ...+.+. +.|..+..+
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~~-~~g~~~~~~ 319 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLDG-GTGLLVPPG 319 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeeeC-CCcEEEcCC
Confidence 35666664 58764 78889998322233 33468999999999999987654 3334455 677777643
Q ss_pred CCCCcCHHHHHHHHHHHHcCCc-HHHHHHHHHH
Q 038830 272 EKGIVRREAIAHCISEILEGKR-DKEIKQNADK 303 (335)
Q Consensus 272 ~~~~~~~~~l~~~i~~ll~~~~-~~~~r~~a~~ 303 (335)
+.+++.+++.+++++++ .+++++++++
T Consensus 320 -----d~~~~~~~l~~l~~~~~~~~~~~~~~~~ 347 (366)
T cd03822 320 -----DPAALAEAIRRLLADPELAQALRARARE 347 (366)
T ss_pred -----CHHHHHHHHHHHHcChHHHHHHHHHHHH
Confidence 68999999999998752 2334444443
No 72
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=97.67 E-value=0.00098 Score=65.44 Aligned_cols=91 Identities=15% Similarity=0.202 Sum_probs=63.0
Q ss_pred EEEeecchh-hhccccCcCeEEcc-----CCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcC
Q 038830 204 LVVNWCPQL-GVLAHEATGCFLTH-----CGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVR 277 (335)
Q Consensus 204 ~v~~w~pq~-~vL~h~~v~~fItH-----gG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~ 277 (335)
.+.+...+. .+++.+++ ++.. +|..+++||+++|+|+|+-|...++......+.+. |+++... +
T Consensus 305 ~l~~~~~el~~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~-g~~~~~~-------d 374 (425)
T PRK05749 305 LLGDTMGELGLLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQA-GAAIQVE-------D 374 (425)
T ss_pred EEEecHHHHHHHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHC-CCeEEEC-------C
Confidence 333433333 78888887 4331 34556999999999999999888888777777666 6555432 6
Q ss_pred HHHHHHHHHHHHcCCcH-HHHHHHHHHH
Q 038830 278 REAIAHCISEILEGKRD-KEIKQNADKW 304 (335)
Q Consensus 278 ~~~l~~~i~~ll~~~~~-~~~r~~a~~l 304 (335)
.+++.++|.+++++++. +.|.+++++.
T Consensus 375 ~~~La~~l~~ll~~~~~~~~m~~~a~~~ 402 (425)
T PRK05749 375 AEDLAKAVTYLLTDPDARQAYGEAGVAF 402 (425)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 89999999999987632 3444444443
No 73
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=97.67 E-value=0.00026 Score=67.90 Aligned_cols=146 Identities=14% Similarity=0.103 Sum_probs=85.7
Q ss_pred CcEEEEEeCCcccCCHHHHH---HHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCC--ceEEEeecchhhhccccCcC
Q 038830 147 GSVVYVSFGSMATLKIEEME---ELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQ--KGLVVNWCPQLGVLAHEATG 221 (335)
Q Consensus 147 ~svvyvsfGS~~~~~~~~~~---~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~--~~~v~~w~pq~~vL~h~~v~ 221 (335)
+++|.+--||....-...+. +.+.-|.+.. ..+++..... . +.+.+...+ ...+++ .-.+++.++++
T Consensus 167 ~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~--~~~~i~~a~~--~-~~i~~~~~~~~~~~~~~--~~~~~m~~aDl- 238 (347)
T PRK14089 167 EGTIAFMPGSRKSEIKRLMPIFKELAKKLEGKE--KILVVPSFFK--G-KDLKEIYGDISEFEISY--DTHKALLEAEF- 238 (347)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHHhhcC--cEEEEeCCCc--H-HHHHHHHhcCCCcEEec--cHHHHHHhhhH-
Confidence 46899999999753334444 3333343322 2333322211 1 222222211 112222 22379999999
Q ss_pred eEEccCCcchHHHHHhcCCCeeecCC--CCChhhhHHHHH---HHhccceeecC----C------CCCCcCHHHHHHHHH
Q 038830 222 CFLTHCGWNSTLEALSLGVPMVAMPL--WTDQSTNSKYVM---DVWKMGLKVPA----D------EKGIVRREAIAHCIS 286 (335)
Q Consensus 222 ~fItHgG~nSv~Eal~~GVP~i~~P~--~~DQ~~Na~~v~---~~~g~G~~l~~----~------~~~~~~~~~l~~~i~ 286 (335)
.|+.+|..|+ |+..+|+|||+ ++ ..-|+.||++++ .. |+.-.+.. . -....|.+.|.+.+.
T Consensus 239 -al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~i-gL~Nii~~~~~~~~vvPEllQ~~~t~~~la~~i~ 314 (347)
T PRK14089 239 -AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHI-GLANIFFDFLGKEPLHPELLQEFVTVENLLKAYK 314 (347)
T ss_pred -HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCee-ehHHHhcCCCcccccCchhhcccCCHHHHHHHHH
Confidence 9999999999 99999999997 44 457899999998 44 55544421 0 012578899998887
Q ss_pred HHHcCCcHHHHHHHHHHHHHHH
Q 038830 287 EILEGKRDKEIKQNADKWRNFA 308 (335)
Q Consensus 287 ~ll~~~~~~~~r~~a~~l~~~~ 308 (335)
+. ..+.+++...++++.+
T Consensus 315 ~~----~~~~~~~~~~~l~~~l 332 (347)
T PRK14089 315 EM----DREKFFKKSKELREYL 332 (347)
T ss_pred HH----HHHHHHHHHHHHHHHh
Confidence 71 1124555555555444
No 74
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=97.66 E-value=0.0013 Score=61.36 Aligned_cols=91 Identities=19% Similarity=0.119 Sum_probs=61.1
Q ss_pred CCceEEEeecchh---hhccccCcCeEEccC----CcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCC
Q 038830 200 SQKGLVVNWCPQL---GVLAHEATGCFLTHC----GWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADE 272 (335)
Q Consensus 200 ~~~~~v~~w~pq~---~vL~h~~v~~fItHg----G~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~ 272 (335)
.+++.+.+|+++. .++..+++ +|.-. -.++++||+++|+|+|+-+..+ ....+.+ +.|.....
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~----~~~~~~~--~~~~~~~~-- 330 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADL--FVLPSHSENFGIVVAEALACGTPVVTTDKVP----WQELIEY--GCGWVVDD-- 330 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCE--EEeccccCCCCcHHHHHHhcCCCEEEcCCCC----HHHHhhc--CceEEeCC--
Confidence 3567778999954 57888998 55332 2478999999999999976432 3333333 66666643
Q ss_pred CCCcCHHHHHHHHHHHHcCCc-HHHHHHHHHHH
Q 038830 273 KGIVRREAIAHCISEILEGKR-DKEIKQNADKW 304 (335)
Q Consensus 273 ~~~~~~~~l~~~i~~ll~~~~-~~~~r~~a~~l 304 (335)
+.+++.++|.+++++++ .+.+.+++++.
T Consensus 331 ----~~~~~~~~i~~l~~~~~~~~~~~~~~~~~ 359 (375)
T cd03821 331 ----DVDALAAALRRALELPQRLKAMGENGRAL 359 (375)
T ss_pred ----ChHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 34999999999998762 13444444443
No 75
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=97.66 E-value=0.00052 Score=65.90 Aligned_cols=147 Identities=17% Similarity=0.197 Sum_probs=81.9
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHhhC--CCcEEEEEeCCCCCcCCccchhh---cC---CceEEE-eecchh---hhc
Q 038830 148 SVVYVSFGSMATLKIEEMEELPCGLKAS--DKYFLWVVRESEQSKLPENFSDE---TS---QKGLVV-NWCPQL---GVL 215 (335)
Q Consensus 148 svvyvsfGS~~~~~~~~~~~l~~~l~~~--~~~flw~~~~~~~~~l~~~~~~~---~~---~~~~v~-~w~pq~---~vL 215 (335)
..+++..|..... +.+..+++++... +..++.+.+......+.+.+.+. .. ++.... ++++.. .++
T Consensus 201 ~~~i~~~Grl~~~--Kg~~~li~a~~~l~~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 278 (388)
T TIGR02149 201 RPYILFVGRITRQ--KGVPHLLDAVHYIPKDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELL 278 (388)
T ss_pred ceEEEEEcccccc--cCHHHHHHHHHHHhhcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHH
Confidence 3455666776632 2344555555443 45555554433221111222211 11 123333 566653 789
Q ss_pred cccCcCeEEcc----CCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCC-CCcCHHHHHHHHHHHHc
Q 038830 216 AHEATGCFLTH----CGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEK-GIVRREAIAHCISEILE 290 (335)
Q Consensus 216 ~h~~v~~fItH----gG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~-~~~~~~~l~~~i~~ll~ 290 (335)
+++++ ||.= +...+++||+++|+|+|+-.. ......+.+. +.|..+..++. ..-..+++.++|.++++
T Consensus 279 ~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~----~~~~e~i~~~-~~G~~~~~~~~~~~~~~~~l~~~i~~l~~ 351 (388)
T TIGR02149 279 SNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASAT----GGIPEVVVDG-ETGFLVPPDNSDADGFQAELAKAINILLA 351 (388)
T ss_pred HhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCC----CCHHHHhhCC-CceEEcCCCCCcccchHHHHHHHHHHHHh
Confidence 99998 6642 224678999999999998654 3355666666 67888865410 01112889999999998
Q ss_pred CCcH-HHHHHHHHH
Q 038830 291 GKRD-KEIKQNADK 303 (335)
Q Consensus 291 ~~~~-~~~r~~a~~ 303 (335)
+++. ++|.+++++
T Consensus 352 ~~~~~~~~~~~a~~ 365 (388)
T TIGR02149 352 DPELAKKMGIAGRK 365 (388)
T ss_pred CHHHHHHHHHHHHH
Confidence 7632 334444443
No 76
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=97.60 E-value=0.0023 Score=61.16 Aligned_cols=97 Identities=22% Similarity=0.241 Sum_probs=68.3
Q ss_pred CceEEEeecchh-hhccccCcCeEEccC--CcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcC
Q 038830 201 QKGLVVNWCPQL-GVLAHEATGCFLTHC--GWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVR 277 (335)
Q Consensus 201 ~~~~v~~w~pq~-~vL~h~~v~~fItHg--G~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~ 277 (335)
+++.+.++.++. .+++.+++-.+.++. ...+++||+++|+|+|+..... .+..++.+. ..|..+... +
T Consensus 261 ~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~~-~~G~lv~~~-----d 331 (372)
T cd04949 261 DYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIEDG-ENGYLVPKG-----D 331 (372)
T ss_pred ceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHcccC-CCceEeCCC-----c
Confidence 456666776665 789999995555553 3568999999999999865321 234556555 678887643 7
Q ss_pred HHHHHHHHHHHHcCCc-HHHHHHHHHHHHH
Q 038830 278 REAIAHCISEILEGKR-DKEIKQNADKWRN 306 (335)
Q Consensus 278 ~~~l~~~i~~ll~~~~-~~~~r~~a~~l~~ 306 (335)
.+++.++|.+++++++ .+++.+++++..+
T Consensus 332 ~~~la~~i~~ll~~~~~~~~~~~~a~~~~~ 361 (372)
T cd04949 332 IEALAEAIIELLNDPKLLQKFSEAAYENAE 361 (372)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 8999999999998863 2456666655543
No 77
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=97.59 E-value=0.00083 Score=66.87 Aligned_cols=137 Identities=14% Similarity=0.131 Sum_probs=85.2
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHhhC-CCcEEEEEeCCCCCcCCccchhhcC-CceEEEeecchh---hhccccCcCeE
Q 038830 149 VVYVSFGSMATLKIEEMEELPCGLKAS-DKYFLWVVRESEQSKLPENFSDETS-QKGLVVNWCPQL---GVLAHEATGCF 223 (335)
Q Consensus 149 vvyvsfGS~~~~~~~~~~~l~~~l~~~-~~~flw~~~~~~~~~l~~~~~~~~~-~~~~v~~w~pq~---~vL~h~~v~~f 223 (335)
.+++..|++... +.+..++++++.. +..+++ ++.+. ..+.+.+... .++.+.+++|+. .+|+.+++ |
T Consensus 264 ~~i~~vGrl~~~--K~~~~li~a~~~~~~~~l~i-vG~G~---~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv--~ 335 (465)
T PLN02871 264 PLIVYVGRLGAE--KNLDFLKRVMERLPGARLAF-VGDGP---YREELEKMFAGTPTVFTGMLQGDELSQAYASGDV--F 335 (465)
T ss_pred eEEEEeCCCchh--hhHHHHHHHHHhCCCcEEEE-EeCCh---HHHHHHHHhccCCeEEeccCCHHHHHHHHHHCCE--E
Confidence 345556887642 3345556666543 455554 44321 1122222222 356777898754 68999999 7
Q ss_pred EccCC----cchHHHHHhcCCCeeecCCCCChhhhHHHHHH---HhccceeecCCCCCCcCHHHHHHHHHHHHcCCcH-H
Q 038830 224 LTHCG----WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMD---VWKMGLKVPADEKGIVRREAIAHCISEILEGKRD-K 295 (335)
Q Consensus 224 ItHgG----~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~---~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~-~ 295 (335)
|.-.. .++++||+++|+|+|+-...+ ....+.+ . +.|..+..+ +.+++.++|.+++++++. +
T Consensus 336 V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv~~~~~~-~~G~lv~~~-----d~~~la~~i~~ll~~~~~~~ 405 (465)
T PLN02871 336 VMPSESETLGFVVLEAMASGVPVVAARAGG----IPDIIPPDQEG-KTGFLYTPG-----DVDDCVEKLETLLADPELRE 405 (465)
T ss_pred EECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhhhcCCCC-CceEEeCCC-----CHHHHHHHHHHHHhCHHHHH
Confidence 75433 357999999999999876432 3345555 5 778888654 689999999999987632 3
Q ss_pred HHHHHHHH
Q 038830 296 EIKQNADK 303 (335)
Q Consensus 296 ~~r~~a~~ 303 (335)
+|.+++++
T Consensus 406 ~~~~~a~~ 413 (465)
T PLN02871 406 RMGAAARE 413 (465)
T ss_pred HHHHHHHH
Confidence 45555544
No 78
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=97.58 E-value=0.0016 Score=61.24 Aligned_cols=150 Identities=19% Similarity=0.192 Sum_probs=86.2
Q ss_pred CCcEEEEEeCCcccC-CHHHHHHHHHHHhhCCCcEE-EEEeCCC-CCcCCccch---h--hcCCceEEEeecchh-hhcc
Q 038830 146 NGSVVYVSFGSMATL-KIEEMEELPCGLKASDKYFL-WVVRESE-QSKLPENFS---D--ETSQKGLVVNWCPQL-GVLA 216 (335)
Q Consensus 146 ~~svvyvsfGS~~~~-~~~~~~~l~~~l~~~~~~fl-w~~~~~~-~~~l~~~~~---~--~~~~~~~v~~w~pq~-~vL~ 216 (335)
+...+++..|..... ..+.+.+.+..+...+..+. ++++... ...+.+.+. + ...+++.+.+|.++. .+|+
T Consensus 183 ~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~l~ 262 (355)
T cd03819 183 KGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGHCSDMPAAYA 262 (355)
T ss_pred CCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCCcccHHHHHH
Confidence 344566777876643 34556666666665433332 2333321 111211111 1 123567777885544 7899
Q ss_pred ccCcCeEEcc--CC-cchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHc-CC
Q 038830 217 HEATGCFLTH--CG-WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILE-GK 292 (335)
Q Consensus 217 h~~v~~fItH--gG-~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~-~~ 292 (335)
.+++..+-++ -| .++++||+++|+|+|+.... .+...+.+. +.|..+..+ +.+++.++|..++. ++
T Consensus 263 ~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~----~~~e~i~~~-~~g~~~~~~-----~~~~l~~~i~~~~~~~~ 332 (355)
T cd03819 263 LADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG----GARETVRPG-ETGLLVPPG-----DAEALAQALDQILSLLP 332 (355)
T ss_pred hCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC----CcHHHHhCC-CceEEeCCC-----CHHHHHHHHHHHHhhCH
Confidence 9999333332 22 36999999999999986543 244555555 578887644 78899999976653 43
Q ss_pred c-HHHHHHHHHHHH
Q 038830 293 R-DKEIKQNADKWR 305 (335)
Q Consensus 293 ~-~~~~r~~a~~l~ 305 (335)
+ .++++++|++..
T Consensus 333 ~~~~~~~~~a~~~~ 346 (355)
T cd03819 333 EGRAKMFAKARMCV 346 (355)
T ss_pred HHHHHHHHHHHHHH
Confidence 2 234555544443
No 79
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=97.47 E-value=0.0016 Score=61.30 Aligned_cols=132 Identities=20% Similarity=0.197 Sum_probs=76.5
Q ss_pred CcEEEEEeCCcccC-CHHHHHHHHHHHhh--CCCcEEEEEeCCCCCcCCccchh-hcCCceEEEeecchh-hhccccCcC
Q 038830 147 GSVVYVSFGSMATL-KIEEMEELPCGLKA--SDKYFLWVVRESEQSKLPENFSD-ETSQKGLVVNWCPQL-GVLAHEATG 221 (335)
Q Consensus 147 ~svvyvsfGS~~~~-~~~~~~~l~~~l~~--~~~~flw~~~~~~~~~l~~~~~~-~~~~~~~v~~w~pq~-~vL~h~~v~ 221 (335)
+..+++..|+.... ..+.+.+.+..+.. .+..|+++-.......+.+...+ ...+++.+.++..+. .+|+.+++
T Consensus 187 ~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~- 265 (360)
T cd04951 187 DTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPLRATLERLIKALGLSNRVKLLGLRDDIAAYYNAADL- 265 (360)
T ss_pred CCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCCcHHHHHHHHHhcCCCCcEEEecccccHHHHHHhhce-
Confidence 34667777876532 22334444444433 24666655332211111111100 123466777776554 88999998
Q ss_pred eEEccCC----cchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 222 CFLTHCG----WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 222 ~fItHgG----~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
||.-.. .++++||+++|+|+|+-. ...+...+.+. |..+..+ +.+++.+++.++++++
T Consensus 266 -~v~~s~~e~~~~~~~Ea~a~G~PvI~~~----~~~~~e~i~~~---g~~~~~~-----~~~~~~~~i~~ll~~~ 327 (360)
T cd04951 266 -FVLSSAWEGFGLVVAEAMACELPVVATD----AGGVREVVGDS---GLIVPIS-----DPEALANKIDEILKMS 327 (360)
T ss_pred -EEecccccCCChHHHHHHHcCCCEEEec----CCChhhEecCC---ceEeCCC-----CHHHHHHHHHHHHhCC
Confidence 555332 578999999999999854 34455555553 4444433 7889999999998543
No 80
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=97.47 E-value=0.0012 Score=64.72 Aligned_cols=90 Identities=19% Similarity=0.278 Sum_probs=63.4
Q ss_pred ceEEE-eecchh---hhccccCcCeEEc-c---CC---cchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecC
Q 038830 202 KGLVV-NWCPQL---GVLAHEATGCFLT-H---CG---WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPA 270 (335)
Q Consensus 202 ~~~v~-~w~pq~---~vL~h~~v~~fIt-H---gG---~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~ 270 (335)
+.... +|+|.. .+|+.+++ +++ + -| -++++||+++|+|+|+... ......+++. +.|+.+.
T Consensus 295 ~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~----~~~~eiv~~~-~~G~lv~- 366 (415)
T cd03816 295 KVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDF----KCIDELVKHG-ENGLVFG- 366 (415)
T ss_pred cEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCC----CCHHHHhcCC-CCEEEEC-
Confidence 44444 588754 67899999 663 1 12 3479999999999999653 2455666666 7888772
Q ss_pred CCCCCcCHHHHHHHHHHHHcC---Cc-HHHHHHHHHHHH
Q 038830 271 DEKGIVRREAIAHCISEILEG---KR-DKEIKQNADKWR 305 (335)
Q Consensus 271 ~~~~~~~~~~l~~~i~~ll~~---~~-~~~~r~~a~~l~ 305 (335)
+.+++.++|.+++++ ++ .+.|.+++++..
T Consensus 367 ------d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 367 ------DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred ------CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 589999999999987 43 355666666654
No 81
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=97.46 E-value=0.0003 Score=57.20 Aligned_cols=127 Identities=20% Similarity=0.250 Sum_probs=68.5
Q ss_pred EEEEEeCCccc-CCHHHHHH-HHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchh-hhccccCcCeEEc
Q 038830 149 VVYVSFGSMAT-LKIEEMEE-LPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQL-GVLAHEATGCFLT 225 (335)
Q Consensus 149 vvyvsfGS~~~-~~~~~~~~-l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~-~vL~h~~v~~fIt 225 (335)
+.++++|+... ...+.+.+ ++..+.+...++-+.+-+.. |+.+.+....++.+.+|+++. ++++.++++...+
T Consensus 3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~----~~~l~~~~~~~v~~~g~~~e~~~~l~~~dv~l~p~ 78 (135)
T PF13692_consen 3 LYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNG----PDELKRLRRPNVRFHGFVEELPEILAAADVGLIPS 78 (135)
T ss_dssp EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECES----S-HHCCHHHCTEEEE-S-HHHHHHHHC-SEEEE-B
T ss_pred ccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCC----HHHHHHhcCCCEEEcCCHHHHHHHHHhCCEEEEEe
Confidence 34555666553 23444444 65566543334444443321 222222223578888888755 8899999977665
Q ss_pred cCC---cchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcC
Q 038830 226 HCG---WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEG 291 (335)
Q Consensus 226 HgG---~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 291 (335)
..+ -+++.|++++|+|+|+.+. ....+++.. +.|..+ .+ +.+++.++|.++++|
T Consensus 79 ~~~~~~~~k~~e~~~~G~pvi~~~~-----~~~~~~~~~-~~~~~~-~~-----~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 79 RFNEGFPNKLLEAMAAGKPVIASDN-----GAEGIVEED-GCGVLV-AN-----DPEELAEAIERLLND 135 (135)
T ss_dssp SS-SCC-HHHHHHHCTT--EEEEHH-----HCHCHS----SEEEE--TT------HHHHHHHHHHHHH-
T ss_pred eCCCcCcHHHHHHHHhCCCEEECCc-----chhhheeec-CCeEEE-CC-----CHHHHHHHHHHHhcC
Confidence 422 4899999999999999765 123344445 777776 33 799999999998864
No 82
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=97.46 E-value=0.0015 Score=63.39 Aligned_cols=91 Identities=19% Similarity=0.142 Sum_probs=64.1
Q ss_pred CceEEEeecchh---hhccccCcCeEEc---cCC-cchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCC
Q 038830 201 QKGLVVNWCPQL---GVLAHEATGCFLT---HCG-WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEK 273 (335)
Q Consensus 201 ~~~~v~~w~pq~---~vL~h~~v~~fIt---HgG-~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~ 273 (335)
+++.+.+++|.. .+|+.+++ ||. +-| .++++||+++|+|+|+....+ ....+.+. +.|..+..+
T Consensus 283 ~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i~~~-~~g~~~~~~-- 353 (405)
T TIGR03449 283 DRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAVADG-ETGLLVDGH-- 353 (405)
T ss_pred ceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhhccC-CceEECCCC--
Confidence 567777888764 68999998 653 223 368999999999999865432 34455555 677777643
Q ss_pred CCcCHHHHHHHHHHHHcCCc-HHHHHHHHHH
Q 038830 274 GIVRREAIAHCISEILEGKR-DKEIKQNADK 303 (335)
Q Consensus 274 ~~~~~~~l~~~i~~ll~~~~-~~~~r~~a~~ 303 (335)
+.+++.++|.+++++++ .++|++++++
T Consensus 354 ---d~~~la~~i~~~l~~~~~~~~~~~~~~~ 381 (405)
T TIGR03449 354 ---DPADWADALARLLDDPRTRIRMGAAAVE 381 (405)
T ss_pred ---CHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 68999999999998763 2345555444
No 83
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.42 E-value=0.004 Score=60.51 Aligned_cols=89 Identities=25% Similarity=0.234 Sum_probs=61.6
Q ss_pred CceEEEeecchh-hhccccCcCeEE--cc--CCc-chHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCC
Q 038830 201 QKGLVVNWCPQL-GVLAHEATGCFL--TH--CGW-NSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKG 274 (335)
Q Consensus 201 ~~~~v~~w~pq~-~vL~h~~v~~fI--tH--gG~-nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~ 274 (335)
+++.+.+++++. .+++++++ || ++ .|. +.++||+++|+|+|+-+...+.. .+.. |.|+.+. +
T Consensus 280 ~~V~~~G~v~~~~~~~~~adv--~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~~-~~g~lv~-~--- 347 (397)
T TIGR03087 280 PGVTVTGSVADVRPYLAHAAV--AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DALP-GAELLVA-A--- 347 (397)
T ss_pred CCeEEeeecCCHHHHHHhCCE--EEecccccCCcccHHHHHHHcCCCEEecCcccccc-----cccC-CcceEeC-C---
Confidence 567778899876 78999999 65 43 344 46999999999999987543221 1223 5676664 3
Q ss_pred CcCHHHHHHHHHHHHcCCc-HHHHHHHHHH
Q 038830 275 IVRREAIAHCISEILEGKR-DKEIKQNADK 303 (335)
Q Consensus 275 ~~~~~~l~~~i~~ll~~~~-~~~~r~~a~~ 303 (335)
+.+++.++|.+++++++ .+.|.+++++
T Consensus 348 --~~~~la~ai~~ll~~~~~~~~~~~~ar~ 375 (397)
T TIGR03087 348 --DPADFAAAILALLANPAEREELGQAARR 375 (397)
T ss_pred --CHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 68999999999998763 1334444443
No 84
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=97.39 E-value=0.0027 Score=61.61 Aligned_cols=82 Identities=22% Similarity=0.195 Sum_probs=59.7
Q ss_pred CceEEEeecchh---hhccccCcCeEEccC-C-cchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCC
Q 038830 201 QKGLVVNWCPQL---GVLAHEATGCFLTHC-G-WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGI 275 (335)
Q Consensus 201 ~~~~v~~w~pq~---~vL~h~~v~~fItHg-G-~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~ 275 (335)
+++.+.+++|+. .+|+.+++-.+.+.- | .++++||+++|+|+|+-.. ......+.+. ..|..+...
T Consensus 281 ~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~----~g~~e~i~~~-~~G~lv~~~---- 351 (396)
T cd03818 281 SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDT----APVREVITDG-ENGLLVDFF---- 351 (396)
T ss_pred ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCC----CCchhhcccC-CceEEcCCC----
Confidence 567777999876 578899983333432 2 2489999999999998643 3445555554 567777643
Q ss_pred cCHHHHHHHHHHHHcCC
Q 038830 276 VRREAIAHCISEILEGK 292 (335)
Q Consensus 276 ~~~~~l~~~i~~ll~~~ 292 (335)
+.+++.++|.++++++
T Consensus 352 -d~~~la~~i~~ll~~~ 367 (396)
T cd03818 352 -DPDALAAAVIELLDDP 367 (396)
T ss_pred -CHHHHHHHHHHHHhCH
Confidence 6899999999999876
No 85
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=97.31 E-value=0.0024 Score=58.71 Aligned_cols=134 Identities=19% Similarity=0.214 Sum_probs=77.2
Q ss_pred CCcEEEEEeCCcccC-CHHHHHHHHHHHhhC--CCcEEEEEeCCCCCcCCccchhh--cCCceEEEeecchh-hhccccC
Q 038830 146 NGSVVYVSFGSMATL-KIEEMEELPCGLKAS--DKYFLWVVRESEQSKLPENFSDE--TSQKGLVVNWCPQL-GVLAHEA 219 (335)
Q Consensus 146 ~~svvyvsfGS~~~~-~~~~~~~l~~~l~~~--~~~flw~~~~~~~~~l~~~~~~~--~~~~~~v~~w~pq~-~vL~h~~ 219 (335)
++..+++..|+.... ..+.+.+.+..+... +..++++-.......+. ...++ ..+++.+.+|.++. .+++.++
T Consensus 187 ~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~~~~~~~-~~~~~~~~~~~v~~~g~~~~~~~~~~~~d 265 (353)
T cd03811 187 PDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGPLREELE-ALAKELGLADRVHFLGFQSNPYPYLKAAD 265 (353)
T ss_pred CCceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCccHHHHH-HHHHhcCCCccEEEecccCCHHHHHHhCC
Confidence 344677777887632 223344444555443 34444432221111111 11111 23566777887765 7899999
Q ss_pred cCeEEc--c--CCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHH---HHHHHHHHcCC
Q 038830 220 TGCFLT--H--CGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAI---AHCISEILEGK 292 (335)
Q Consensus 220 v~~fIt--H--gG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l---~~~i~~ll~~~ 292 (335)
+ +|. + +.-++++||+++|+|+|+-... .....+.+. +.|..+..+ +.+.+ .+.+..+..++
T Consensus 266 ~--~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~~-~~g~~~~~~-----~~~~~~~~~~~i~~~~~~~ 333 (353)
T cd03811 266 L--FVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREILEDG-ENGLLVPVG-----DEAALAAAALALLDLLLDP 333 (353)
T ss_pred E--EEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHhcCC-CceEEECCC-----CHHHHHHHHHHHHhccCCh
Confidence 8 553 2 2357899999999999986543 455667666 788887644 56666 44455555554
No 86
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=97.28 E-value=0.0018 Score=60.73 Aligned_cols=132 Identities=16% Similarity=0.118 Sum_probs=73.8
Q ss_pred EEEEEeCCcccC-CHHHHHHHHHHHhhCC--CcEEEEEeCCCCCcCCccc--hhhcCCceEEEeecchh---hhccccCc
Q 038830 149 VVYVSFGSMATL-KIEEMEELPCGLKASD--KYFLWVVRESEQSKLPENF--SDETSQKGLVVNWCPQL---GVLAHEAT 220 (335)
Q Consensus 149 vvyvsfGS~~~~-~~~~~~~l~~~l~~~~--~~flw~~~~~~~~~l~~~~--~~~~~~~~~v~~w~pq~---~vL~h~~v 220 (335)
.+.+..|+.... ..+.+.+.+..+...+ ..++++-........-... .....+++.+.+++|+. .+|+.+++
T Consensus 196 ~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~ 275 (365)
T cd03809 196 PYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARA 275 (365)
T ss_pred CeEEEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhh
Confidence 455666877642 2344555555554443 4444332221111000000 01234667777899776 67888888
Q ss_pred CeEEcc--CCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 221 GCFLTH--CGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 221 ~~fItH--gG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
..+-+. +..++++||+++|+|+|+-...+ ....+.+ .|..+..+ +.+++.++|.+++.++
T Consensus 276 ~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~---~~~~~~~~-----~~~~~~~~i~~l~~~~ 337 (365)
T cd03809 276 FVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVAGD---AALYFDPL-----DPEALAAAIERLLEDP 337 (365)
T ss_pred hcccchhccCCCCHHHHhcCCCcEEecCCCC----ccceecC---ceeeeCCC-----CHHHHHHHHHHHhcCH
Confidence 322222 23468999999999999855422 1112222 24445433 6899999999998876
No 87
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=97.25 E-value=0.0068 Score=58.20 Aligned_cols=143 Identities=15% Similarity=0.135 Sum_probs=85.0
Q ss_pred CCcEEEEEeCCcccC-CHHHHHHHHHHHhhC-----CCcEEEEEeCCCCCcCC------ccch---h---hcCCceEEEe
Q 038830 146 NGSVVYVSFGSMATL-KIEEMEELPCGLKAS-----DKYFLWVVRESEQSKLP------ENFS---D---ETSQKGLVVN 207 (335)
Q Consensus 146 ~~svvyvsfGS~~~~-~~~~~~~l~~~l~~~-----~~~flw~~~~~~~~~l~------~~~~---~---~~~~~~~v~~ 207 (335)
+...+++..|+.... ..+.+.+.+..+... +..+++ ++..... .+ +.+. + ...+++.+.+
T Consensus 209 ~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i-~G~~~~~-~~~~~~~~~~l~~~~~~~~~l~~~V~f~g 286 (392)
T cd03805 209 SGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVI-AGGYDPR-VAENVEYLEELQRLAEELLLLEDQVIFLP 286 (392)
T ss_pred CCceEEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEE-EcCCCCC-CchhHHHHHHHHHHHHHhcCCCceEEEeC
Confidence 344677777887642 234444444444432 344444 4432111 11 1111 1 1245778889
Q ss_pred ecchh---hhccccCcCeEEccC---C-cchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHH
Q 038830 208 WCPQL---GVLAHEATGCFLTHC---G-WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREA 280 (335)
Q Consensus 208 w~pq~---~vL~h~~v~~fItHg---G-~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~ 280 (335)
++|+. .+|..+++ ++... | ..+++||+++|+|+|+.-..+ ....+.+. +.|..+. .+.++
T Consensus 287 ~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i~~~-~~g~~~~------~~~~~ 353 (392)
T cd03805 287 SISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETVVDG-ETGFLCE------PTPEE 353 (392)
T ss_pred CCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHhccC-CceEEeC------CCHHH
Confidence 99876 67888998 66321 2 367899999999999864432 33445554 5676664 26889
Q ss_pred HHHHHHHHHcCCc-HHHHHHHHHH
Q 038830 281 IAHCISEILEGKR-DKEIKQNADK 303 (335)
Q Consensus 281 l~~~i~~ll~~~~-~~~~r~~a~~ 303 (335)
+.++|.+++++++ .++|.+++++
T Consensus 354 ~a~~i~~l~~~~~~~~~~~~~a~~ 377 (392)
T cd03805 354 FAEAMLKLANDPDLADRMGAAGRK 377 (392)
T ss_pred HHHHHHHHHhChHHHHHHHHHHHH
Confidence 9999999998773 2445555544
No 88
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.10 E-value=0.0051 Score=61.51 Aligned_cols=132 Identities=16% Similarity=0.181 Sum_probs=89.1
Q ss_pred CCCcEEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhc------CCceEEEeecchh---hhc
Q 038830 145 ANGSVVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDET------SQKGLVVNWCPQL---GVL 215 (335)
Q Consensus 145 ~~~svvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~------~~~~~v~~w~pq~---~vL 215 (335)
++.-|||+||+......++.+..-++-|...+-.++|....+....+-..+.+.. .+|.++.+-.|.. +=+
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~ 506 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARY 506 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhh
Confidence 5667999999999999999888888888888899999988753332222222111 1344444444433 445
Q ss_pred cccCcCeEEc---cCCcchHHHHHhcCCCeeecCCCCChhh--hHHHHHHHhccceeecCCCCCCcCHHHHHHHH
Q 038830 216 AHEATGCFLT---HCGWNSTLEALSLGVPMVAMPLWTDQST--NSKYVMDVWKMGLKVPADEKGIVRREAIAHCI 285 (335)
Q Consensus 216 ~h~~v~~fIt---HgG~nSv~Eal~~GVP~i~~P~~~DQ~~--Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i 285 (335)
.-+|+ |+- -+|..|..|++..|||+|+++ ++||. |+.-+....|+-..+..+ ..+=|+++|
T Consensus 507 ~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~vA~s-----~~dYV~~av 572 (620)
T COG3914 507 GIADL--VLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELVADS-----RADYVEKAV 572 (620)
T ss_pred chhhe--eeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhhcCC-----HHHHHHHHH
Confidence 56666 764 589999999999999999996 88876 555554443655555422 334466666
No 89
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=97.07 E-value=0.0066 Score=61.21 Aligned_cols=101 Identities=18% Similarity=0.158 Sum_probs=66.0
Q ss_pred CceEEEeecchhhhccccCcCeEEcc---CC-cchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCC-CCC
Q 038830 201 QKGLVVNWCPQLGVLAHEATGCFLTH---CG-WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADE-KGI 275 (335)
Q Consensus 201 ~~~~v~~w~pq~~vL~h~~v~~fItH---gG-~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~-~~~ 275 (335)
+++.+.++.+...++..+++ ||.- =| ..+++||+++|+|+|+.... ..+...+++. ..|..+..+. .+.
T Consensus 376 ~~V~f~G~~~~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~---~G~~eiI~~g-~nG~lv~~~~~~~d 449 (500)
T TIGR02918 376 DYIHLKGHRNLSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVN---YGNPTFIEDN-KNGYLIPIDEEEDD 449 (500)
T ss_pred CeEEEcCCCCHHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCC---CCCHHHccCC-CCEEEEeCCccccc
Confidence 45666677776789999998 6642 23 46899999999999996542 1244555555 5677775220 001
Q ss_pred -cC-HHHHHHHHHHHHcCCcHHHHHHHHHHHHHH
Q 038830 276 -VR-REAIAHCISEILEGKRDKEIKQNADKWRNF 307 (335)
Q Consensus 276 -~~-~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~ 307 (335)
-+ .++++++|.++++++....|.+++.+.++.
T Consensus 450 ~~~~~~~la~~I~~ll~~~~~~~~~~~a~~~a~~ 483 (500)
T TIGR02918 450 EDQIITALAEKIVEYFNSNDIDAFHEYSYQIAEG 483 (500)
T ss_pred hhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHh
Confidence 12 778999999999544345566666664443
No 90
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.06 E-value=0.013 Score=58.52 Aligned_cols=134 Identities=17% Similarity=0.213 Sum_probs=76.9
Q ss_pred cEEEEEeCCcccCC-HHHHHHHHHHHhhCCCcE-EEEEeCCCC-CcCCccchh---h--cCCceEEEeecchhhhccccC
Q 038830 148 SVVYVSFGSMATLK-IEEMEELPCGLKASDKYF-LWVVRESEQ-SKLPENFSD---E--TSQKGLVVNWCPQLGVLAHEA 219 (335)
Q Consensus 148 svvyvsfGS~~~~~-~~~~~~l~~~l~~~~~~f-lw~~~~~~~-~~l~~~~~~---~--~~~~~~v~~w~pq~~vL~h~~ 219 (335)
..+.+..|...... .+.+.+.+..+.+....+ +++++.... ....+.+.+ + +.+++.+.+...-..+++.++
T Consensus 293 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~V~f~G~~~v~~~l~~aD 372 (475)
T cd03813 293 PPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLGLEDNVKFTGFQNVKEYLPKLD 372 (475)
T ss_pred CcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHhCCCCeEEEcCCccHHHHHHhCC
Confidence 34566668776432 233444444443322222 345554321 111111111 1 235666667444447888888
Q ss_pred cCeEEcc----CCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHH----h-ccceeecCCCCCCcCHHHHHHHHHHHHc
Q 038830 220 TGCFLTH----CGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDV----W-KMGLKVPADEKGIVRREAIAHCISEILE 290 (335)
Q Consensus 220 v~~fItH----gG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~----~-g~G~~l~~~~~~~~~~~~l~~~i~~ll~ 290 (335)
+ ||.- +--++++||+++|+|+|+-. .......+.+. . ..|..+... +.+++.++|.++++
T Consensus 373 v--~vlpS~~Eg~p~~vlEAma~G~PVVatd----~g~~~elv~~~~~~~~g~~G~lv~~~-----d~~~la~ai~~ll~ 441 (475)
T cd03813 373 V--LVLTSISEGQPLVILEAMAAGIPVVATD----VGSCRELIEGADDEALGPAGEVVPPA-----DPEALARAILRLLK 441 (475)
T ss_pred E--EEeCchhhcCChHHHHHHHcCCCEEECC----CCChHHHhcCCcccccCCceEEECCC-----CHHHHHHHHHHHhc
Confidence 8 5533 23478999999999999943 33444555552 0 267777643 78999999999998
Q ss_pred CC
Q 038830 291 GK 292 (335)
Q Consensus 291 ~~ 292 (335)
++
T Consensus 442 ~~ 443 (475)
T cd03813 442 DP 443 (475)
T ss_pred CH
Confidence 76
No 91
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.06 E-value=0.0054 Score=56.36 Aligned_cols=132 Identities=16% Similarity=0.143 Sum_probs=93.5
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhc--CCceEEEeecchh-hhccccCcCeEEc
Q 038830 149 VVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDET--SQKGLVVNWCPQL-GVLAHEATGCFLT 225 (335)
Q Consensus 149 vvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~--~~~~~v~~w~pq~-~vL~h~~v~~fIt 225 (335)
-|+|++|-.- +....-+++..|++.++.+-.+++..+ .-+++...+. .+|..+......+ .++..++. .|+
T Consensus 160 ~ilI~lGGsD--pk~lt~kvl~~L~~~~~nl~iV~gs~~--p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d~--aI~ 233 (318)
T COG3980 160 DILITLGGSD--PKNLTLKVLAELEQKNVNLHIVVGSSN--PTLKNLRKRAEKYPNINLYIDTNDMAELMKEADL--AIS 233 (318)
T ss_pred eEEEEccCCC--hhhhHHHHHHHhhccCeeEEEEecCCC--cchhHHHHHHhhCCCeeeEecchhHHHHHHhcch--hee
Confidence 4888888543 223456778888877766666676331 1222333333 2455665555544 78889998 888
Q ss_pred cCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 226 HCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 226 HgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
-+|. |+.|++.-|+|.+++|+...|---|+..+.. |+-..+.-. ++.+.+..-+.+++.+.
T Consensus 234 AaGs-tlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~l-g~~~~l~~~----l~~~~~~~~~~~i~~d~ 294 (318)
T COG3980 234 AAGS-TLYEALLLGVPSLVLPLAENQIATAKEFEAL-GIIKQLGYH----LKDLAKDYEILQIQKDY 294 (318)
T ss_pred ccch-HHHHHHHhcCCceEEeeeccHHHHHHHHHhc-CchhhccCC----CchHHHHHHHHHhhhCH
Confidence 7765 8999999999999999999999999999998 776666432 56677777777888776
No 92
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=97.03 E-value=0.013 Score=57.82 Aligned_cols=81 Identities=21% Similarity=0.159 Sum_probs=57.9
Q ss_pred CCceEEEeecchh---hhcccc----CcCeEEccC---C-cchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceee
Q 038830 200 SQKGLVVNWCPQL---GVLAHE----ATGCFLTHC---G-WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKV 268 (335)
Q Consensus 200 ~~~~~v~~w~pq~---~vL~h~----~v~~fItHg---G-~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l 268 (335)
.+++.+.+++++. .+++.+ ++ ||... | -++++||+++|+|+|+-... .+...+.+. ..|+.+
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv--~v~pS~~E~fg~~~lEAma~G~PvV~s~~g----g~~eiv~~~-~~G~lv 388 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGI--FVNPALTEPFGLTLLEAAACGLPIVATDDG----GPRDIIANC-RNGLLV 388 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCE--EecccccCCcccHHHHHHHhCCCEEEeCCC----CcHHHhcCC-CcEEEe
Confidence 3556666777765 446655 56 87643 3 46999999999999987543 344555554 568877
Q ss_pred cCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 269 PADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 269 ~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
... +.+++.++|.++++++
T Consensus 389 ~~~-----d~~~la~~i~~ll~~~ 407 (439)
T TIGR02472 389 DVL-----DLEAIASALEDALSDS 407 (439)
T ss_pred CCC-----CHHHHHHHHHHHHhCH
Confidence 654 6899999999999876
No 93
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=96.96 E-value=0.0082 Score=57.12 Aligned_cols=97 Identities=15% Similarity=0.247 Sum_probs=70.2
Q ss_pred CCceEEEeecchhhh---ccccCcCeEEccC-------C------cchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhc
Q 038830 200 SQKGLVVNWCPQLGV---LAHEATGCFLTHC-------G------WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWK 263 (335)
Q Consensus 200 ~~~~~v~~w~pq~~v---L~h~~v~~fItHg-------G------~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g 263 (335)
.+|+...+|+|+.++ |+. +.|.+...- . -+-+.+.+++|+|+|+++ +...+..+++. +
T Consensus 206 ~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~~V~~~-~ 279 (333)
T PRK09814 206 SANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIADFIVEN-G 279 (333)
T ss_pred CCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHHHHHhC-C
Confidence 467788899998744 554 554443321 1 122778899999999975 45677888888 9
Q ss_pred cceeecCCCCCCcCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Q 038830 264 MGLKVPADEKGIVRREAIAHCISEILEGKRDKEIKQNADKWRNFAKE 310 (335)
Q Consensus 264 ~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~ 310 (335)
+|+.++ +.+++.+++.++. +++.++|++|+++++++++.
T Consensus 280 ~G~~v~-------~~~el~~~l~~~~-~~~~~~m~~n~~~~~~~~~~ 318 (333)
T PRK09814 280 LGFVVD-------SLEELPEIIDNIT-EEEYQEMVENVKKISKLLRN 318 (333)
T ss_pred ceEEeC-------CHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHhc
Confidence 999985 4578888888753 34456799999999998874
No 94
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.96 E-value=0.014 Score=54.96 Aligned_cols=123 Identities=17% Similarity=0.222 Sum_probs=68.5
Q ss_pred EEEeCCcccCCHHHHHHHHHHHhhC--CCcEEEEEeCC-CCCcCCccch--hhcCCceEEEeecchh---hhccccCcCe
Q 038830 151 YVSFGSMATLKIEEMEELPCGLKAS--DKYFLWVVRES-EQSKLPENFS--DETSQKGLVVNWCPQL---GVLAHEATGC 222 (335)
Q Consensus 151 yvsfGS~~~~~~~~~~~l~~~l~~~--~~~flw~~~~~-~~~~l~~~~~--~~~~~~~~v~~w~pq~---~vL~h~~v~~ 222 (335)
++..|+.... +.+..+++++... +.+++ .++.. ....+.+.+. ....+++.+.+++|+. ..+..+++
T Consensus 196 i~~~G~~~~~--Kg~~~li~a~~~l~~~~~l~-ivG~~~~~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad~-- 270 (363)
T cd04955 196 YLLVGRIVPE--NNIDDLIEAFSKSNSGKKLV-IVGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAAL-- 270 (363)
T ss_pred EEEEeccccc--CCHHHHHHHHHhhccCceEE-EEcCCCCcchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCCE--
Confidence 3456877632 2244455555443 34544 34432 1111111121 1234677788999886 56777777
Q ss_pred EEccCCc-----chHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 223 FLTHCGW-----NSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 223 fItHgG~-----nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
++.+.-+ ++++||+++|+|+|+-...+. ...+.+. |..+... +.+.++|.++++++
T Consensus 271 ~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~----~e~~~~~---g~~~~~~-------~~l~~~i~~l~~~~ 331 (363)
T cd04955 271 FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFN----REVLGDK---AIYFKVG-------DDLASLLEELEADP 331 (363)
T ss_pred EEeCCccCCCCChHHHHHHHcCCCEEEecCCcc----ceeecCC---eeEecCc-------hHHHHHHHHHHhCH
Confidence 5554333 579999999999998754321 1122222 3333221 12999999999876
No 95
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=96.88 E-value=0.0094 Score=56.09 Aligned_cols=134 Identities=16% Similarity=0.102 Sum_probs=77.0
Q ss_pred CcEEEEEeCCcccCC-HHHHHHHHHHHhhCCCcEEEE-EeCCCC-CcCCccch-hhcCCceEEEeecchh-hhccccCcC
Q 038830 147 GSVVYVSFGSMATLK-IEEMEELPCGLKASDKYFLWV-VRESEQ-SKLPENFS-DETSQKGLVVNWCPQL-GVLAHEATG 221 (335)
Q Consensus 147 ~svvyvsfGS~~~~~-~~~~~~l~~~l~~~~~~flw~-~~~~~~-~~l~~~~~-~~~~~~~~v~~w~pq~-~vL~h~~v~ 221 (335)
...+.+..|+..... .+.+.+.+..|.+.+..+-++ ++.+.. ..+..... ....+++.+.++..+. .++..+++
T Consensus 191 ~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi- 269 (358)
T cd03812 191 DKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGELEEEIKKKVKELGLEDKVIFLGVRNDVPELLQAMDV- 269 (358)
T ss_pred CCEEEEEEeccccccChHHHHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhcCCCCcEEEecccCCHHHHHHhcCE-
Confidence 345666677766322 344555555555433333332 332211 11111110 1123566777775454 78889888
Q ss_pred eEEcc----CCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCCc
Q 038830 222 CFLTH----CGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGKR 293 (335)
Q Consensus 222 ~fItH----gG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~ 293 (335)
+|.- +--++++||+++|+|+|+-...+ ....+.+ +.|.....+ +.+++.++|.+++++++
T Consensus 270 -~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i~~--~~~~~~~~~-----~~~~~a~~i~~l~~~~~ 333 (358)
T cd03812 270 -FLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDLTD--LVKFLSLDE-----SPEIWAEEILKLKSEDR 333 (358)
T ss_pred -EEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhhcc--CccEEeCCC-----CHHHHHHHHHHHHhCcc
Confidence 5532 34689999999999999865543 2233333 445444322 57999999999998873
No 96
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=96.87 E-value=0.022 Score=55.29 Aligned_cols=131 Identities=15% Similarity=0.156 Sum_probs=75.1
Q ss_pred CCcEEEEEeCCcccC-CHHHHHHHHHHHhh--CCCcEEEEEeCCCC-CcCCccchhh--cCCceEEEeecchh---hhcc
Q 038830 146 NGSVVYVSFGSMATL-KIEEMEELPCGLKA--SDKYFLWVVRESEQ-SKLPENFSDE--TSQKGLVVNWCPQL---GVLA 216 (335)
Q Consensus 146 ~~svvyvsfGS~~~~-~~~~~~~l~~~l~~--~~~~flw~~~~~~~-~~l~~~~~~~--~~~~~~v~~w~pq~---~vL~ 216 (335)
++..+++..|..... ..+.+.+.+..+.+ .+..++++ +.+.. ..+. +..++ ..+++.+.+|+|+. .+|+
T Consensus 191 ~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~-G~g~~~~~l~-~~~~~~~l~~~v~~~G~~~~~~~~~~l~ 268 (398)
T cd03796 191 NDKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIG-GDGPKRILLE-EMREKYNLQDRVELLGAVPHERVRDVLV 268 (398)
T ss_pred CCceEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEE-eCCchHHHHH-HHHHHhCCCCeEEEeCCCCHHHHHHHHH
Confidence 345677777877542 23334444444433 34444443 32211 1111 11122 23567778998754 6888
Q ss_pred ccCcCeEEccC---Cc-chHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 217 HEATGCFLTHC---GW-NSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 217 h~~v~~fItHg---G~-nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
.+++ ||.-. |. .+++||+++|+|+|+-+..+ ....+.+ |.+.... .+.+++.+++.+++++.
T Consensus 269 ~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i~~--~~~~~~~------~~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 269 QGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVLPP--DMILLAE------PDVESIVRKLEEAISIL 334 (398)
T ss_pred hCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhheeC--CceeecC------CCHHHHHHHHHHHHhCh
Confidence 9998 65322 33 49999999999999977643 2233333 3232222 26789999999999754
No 97
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=96.81 E-value=0.01 Score=55.31 Aligned_cols=129 Identities=12% Similarity=0.020 Sum_probs=76.7
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhh--cCCceEEEeecchh---hhccccCcCeE
Q 038830 149 VVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDE--TSQKGLVVNWCPQL---GVLAHEATGCF 223 (335)
Q Consensus 149 vvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~--~~~~~~v~~w~pq~---~vL~h~~v~~f 223 (335)
.+.+..|.... .+....+++++...+.+++++-.......+.....+. ..+++.+.+++++. .+++.+++-.+
T Consensus 172 ~~i~~~Gr~~~--~Kg~~~li~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v~ 249 (335)
T cd03802 172 DYLLFLGRISP--EKGPHLAIRAARRAGIPLKLAGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALLF 249 (335)
T ss_pred CEEEEEEeecc--ccCHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEEe
Confidence 34455577643 2334556667777777766543322111111111111 24677888999875 56888888333
Q ss_pred Ecc--CC-cchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcC
Q 038830 224 LTH--CG-WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEG 291 (335)
Q Consensus 224 ItH--gG-~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 291 (335)
-+. -| -.+++||+++|+|+|+-... .+...+.+. ..|..+. ..+++.+++.++...
T Consensus 250 ps~~~E~~~~~~lEAma~G~PvI~~~~~----~~~e~i~~~-~~g~l~~-------~~~~l~~~l~~l~~~ 308 (335)
T cd03802 250 PILWEEPFGLVMIEAMACGTPVIAFRRG----AVPEVVEDG-VTGFLVD-------SVEELAAAVARADRL 308 (335)
T ss_pred CCcccCCcchHHHHHHhcCCCEEEeCCC----CchhheeCC-CcEEEeC-------CHHHHHHHHHHHhcc
Confidence 332 34 35899999999999987653 233334333 3566663 288899999888653
No 98
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=96.76 E-value=0.0088 Score=49.07 Aligned_cols=100 Identities=16% Similarity=0.200 Sum_probs=61.7
Q ss_pred EEEEeCCcccCCHHHH--HHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCce-EEEeec--chh-hhccccCcCeE
Q 038830 150 VYVSFGSMATLKIEEM--EELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKG-LVVNWC--PQL-GVLAHEATGCF 223 (335)
Q Consensus 150 vyvsfGS~~~~~~~~~--~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~-~v~~w~--pq~-~vL~h~~v~~f 223 (335)
+||+-||....-...+ .|+..-.+.-..++|..++.+.. .| + ++ .+.+|. +-. .+...+++ +
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~d~--kp------v--agl~v~~F~~~~kiQsli~darI--V 69 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNGDI--KP------V--AGLRVYGFDKEEKIQSLIHDARI--V 69 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCCCc--cc------c--cccEEEeechHHHHHHHhhcceE--E
Confidence 6888898842111111 11222222234577777776422 11 1 23 555543 433 66777777 9
Q ss_pred EccCCcchHHHHHhcCCCeeecCCC--------CChhhhHHHHHHH
Q 038830 224 LTHCGWNSTLEALSLGVPMVAMPLW--------TDQSTNSKYVMDV 261 (335)
Q Consensus 224 ItHgG~nSv~Eal~~GVP~i~~P~~--------~DQ~~Na~~v~~~ 261 (335)
|+|||.||++.++..++|.|++|-- .+|..-|..+++.
T Consensus 70 ISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae~ 115 (161)
T COG5017 70 ISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEI 115 (161)
T ss_pred EeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHhc
Confidence 9999999999999999999999953 2455566666665
No 99
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=96.73 E-value=0.044 Score=52.56 Aligned_cols=89 Identities=21% Similarity=0.162 Sum_probs=57.0
Q ss_pred CceEEEeec--chh---hhccccCcCeEEccCC----cchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCC
Q 038830 201 QKGLVVNWC--PQL---GVLAHEATGCFLTHCG----WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPAD 271 (335)
Q Consensus 201 ~~~~v~~w~--pq~---~vL~h~~v~~fItHgG----~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~ 271 (335)
+++.+.++. ++. .+++.+++ |+.-+- .++++||+++|+|+|+-...+ ....+.+. ..|+.+.
T Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i~~~-~~g~~~~-- 322 (372)
T cd03792 252 PDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQIEDG-ETGFLVD-- 322 (372)
T ss_pred CCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhcccC-CceEEeC--
Confidence 456666765 332 67889998 775432 459999999999999876432 23344444 5566553
Q ss_pred CCCCcCHHHHHHHHHHHHcCCc-HHHHHHHHHH
Q 038830 272 EKGIVRREAIAHCISEILEGKR-DKEIKQNADK 303 (335)
Q Consensus 272 ~~~~~~~~~l~~~i~~ll~~~~-~~~~r~~a~~ 303 (335)
+.+++..+|.+++.+++ .++|.+++++
T Consensus 323 -----~~~~~a~~i~~ll~~~~~~~~~~~~a~~ 350 (372)
T cd03792 323 -----TVEEAAVRILYLLRDPELRRKMGANARE 350 (372)
T ss_pred -----CcHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 34567789999997762 1334444433
No 100
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=96.73 E-value=0.022 Score=55.13 Aligned_cols=171 Identities=23% Similarity=0.185 Sum_probs=92.3
Q ss_pred CCCcEEEEEeCCcccCCHHHHH---HHHHHHhh--CCCcEEEEEeCCCCCcCCccchhhcCCceEEEe-ecchhhhcccc
Q 038830 145 ANGSVVYVSFGSMATLKIEEME---ELPCGLKA--SDKYFLWVVRESEQSKLPENFSDETSQKGLVVN-WCPQLGVLAHE 218 (335)
Q Consensus 145 ~~~svvyvsfGS~~~~~~~~~~---~l~~~l~~--~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~-w~pq~~vL~h~ 218 (335)
+++++|-+--||....=...+. +.++.+.+ .+..|+...-+.....+-.........+..+.- .-.-.+++..+
T Consensus 182 ~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~a 261 (373)
T PF02684_consen 182 PDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEVHEELIEEILAEYPPDVSIVIIEGESYDAMAAA 261 (373)
T ss_pred CCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHHHHHHHHHHHHhhCCCCeEEEcCCchHHHHHhC
Confidence 5678999999997632122223 33333433 345555443322111100011111122223322 22334788899
Q ss_pred CcCeEEccCCcchHHHHHhcCCCeeec-CCCCChhhhHHHHHHHhccce-------eecCC-CCCCcCHHHHHHHHHHHH
Q 038830 219 ATGCFLTHCGWNSTLEALSLGVPMVAM-PLWTDQSTNSKYVMDVWKMGL-------KVPAD-EKGIVRREAIAHCISEIL 289 (335)
Q Consensus 219 ~v~~fItHgG~nSv~Eal~~GVP~i~~-P~~~DQ~~Na~~v~~~~g~G~-------~l~~~-~~~~~~~~~l~~~i~~ll 289 (335)
++ .+.-+|- .++|+...|+|||+. -...=-+.-++++.+.==+|+ .+-++ -.+..+.+.+.+++.+++
T Consensus 262 d~--al~~SGT-aTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll 338 (373)
T PF02684_consen 262 DA--ALAASGT-ATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELL 338 (373)
T ss_pred cc--hhhcCCH-HHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHh
Confidence 88 6666664 678999999999964 222223445555544311121 11000 012689999999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHhcCChHHHH
Q 038830 290 EGKRDKEIKQNADKWRNFAKEAVAKGGSSDKN 321 (335)
Q Consensus 290 ~~~~~~~~r~~a~~l~~~~~~a~~~ggss~~~ 321 (335)
.++ ..++..+...+.+++...+|.++...
T Consensus 339 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (373)
T PF02684_consen 339 ENP---EKRKKQKELFREIRQLLGPGASSRAA 367 (373)
T ss_pred cCH---HHHHHHHHHHHHHHHhhhhccCCHHH
Confidence 887 44555556666666666666665543
No 101
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=96.72 E-value=0.074 Score=51.70 Aligned_cols=150 Identities=17% Similarity=0.216 Sum_probs=91.9
Q ss_pred EEEEeCCcccCCHHHHHHHHHHHhhC--CCcEEEEEeCCCCC----------cCCccchhh-----cCCceEEEeecchh
Q 038830 150 VYVSFGSMATLKIEEMEELPCGLKAS--DKYFLWVVRESEQS----------KLPENFSDE-----TSQKGLVVNWCPQL 212 (335)
Q Consensus 150 vyvsfGS~~~~~~~~~~~l~~~l~~~--~~~flw~~~~~~~~----------~l~~~~~~~-----~~~~~~v~~w~pq~ 212 (335)
+.|..+|.. -..+.+.+....|.+. +.-.||+=|..+.- .+.-....+ ...++.+.+-+--+
T Consensus 233 v~iaaSTH~-GEeei~l~~~~~l~~~~~~~llIlVPRHpERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL 311 (419)
T COG1519 233 VWVAASTHE-GEEEIILDAHQALKKQFPNLLLILVPRHPERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGEL 311 (419)
T ss_pred eEEEecCCC-chHHHHHHHHHHHHhhCCCceEEEecCChhhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecHhHH
Confidence 555555533 2334455566666543 45677876654210 010000000 01244555544333
Q ss_pred -hhccccCc---C-eEEccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHH
Q 038830 213 -GVLAHEAT---G-CFLTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISE 287 (335)
Q Consensus 213 -~vL~h~~v---~-~fItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ 287 (335)
.+++-+++ | -|+-+||.| .+|.+++|+|+|.=|+..-|..-++.+.+. |.|+.++ +.+.+.+++..
T Consensus 312 ~l~y~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~-ga~~~v~-------~~~~l~~~v~~ 382 (419)
T COG1519 312 GLLYGIADIAFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERLLQA-GAGLQVE-------DADLLAKAVEL 382 (419)
T ss_pred HHHHhhccEEEECCcccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHHHhc-CCeEEEC-------CHHHHHHHHHH
Confidence 44555544 2 245588887 789999999999999999999999999999 9999885 37778888887
Q ss_pred HHcCCc-HHHHHHHHHHHHHHHH
Q 038830 288 ILEGKR-DKEIKQNADKWRNFAK 309 (335)
Q Consensus 288 ll~~~~-~~~~r~~a~~l~~~~~ 309 (335)
++.+++ .+.|.+++.++=+..+
T Consensus 383 l~~~~~~r~~~~~~~~~~v~~~~ 405 (419)
T COG1519 383 LLADEDKREAYGRAGLEFLAQNR 405 (419)
T ss_pred hcCCHHHHHHHHHHHHHHHHHhh
Confidence 777653 2445555555544443
No 102
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=96.67 E-value=0.03 Score=58.56 Aligned_cols=94 Identities=26% Similarity=0.270 Sum_probs=63.6
Q ss_pred CCceEEEeecchh-hhccccCcCeEEc---cCC-cchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCC
Q 038830 200 SQKGLVVNWCPQL-GVLAHEATGCFLT---HCG-WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKG 274 (335)
Q Consensus 200 ~~~~~v~~w~pq~-~vL~h~~v~~fIt---HgG-~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~ 274 (335)
.+++.+.+|.++. .+|+.+++ ||. +-| -++++||+++|+|+|+-... .+...+.+. ..|+.+..+
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G~~EiV~dg-~~GlLv~~~--- 642 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----GAGEAVQEG-VTGLTLPAD--- 642 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCC----ChHHHccCC-CCEEEeCCC---
Confidence 3677777887765 78999998 654 334 47999999999999997653 244556555 578888654
Q ss_pred CcCHHHHHHHHHHHHcCCc-HHHHHHHHHH
Q 038830 275 IVRREAIAHCISEILEGKR-DKEIKQNADK 303 (335)
Q Consensus 275 ~~~~~~l~~~i~~ll~~~~-~~~~r~~a~~ 303 (335)
..+.+++.+++.+++.+.. ...+++++++
T Consensus 643 d~~~~~La~aL~~ll~~l~~~~~l~~~ar~ 672 (694)
T PRK15179 643 TVTAPDVAEALARIHDMCAADPGIARKAAD 672 (694)
T ss_pred CCChHHHHHHHHHHHhChhccHHHHHHHHH
Confidence 4566777777777765321 1255555443
No 103
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=96.67 E-value=0.003 Score=60.66 Aligned_cols=130 Identities=16% Similarity=0.154 Sum_probs=76.0
Q ss_pred CCCcEEEEEeCCcccCC-H---HHHHHHHHHHhhC-CCcEEEEEeCCC--CCcCCccchhhcCCceEEEeecch---hhh
Q 038830 145 ANGSVVYVSFGSMATLK-I---EEMEELPCGLKAS-DKYFLWVVRESE--QSKLPENFSDETSQKGLVVNWCPQ---LGV 214 (335)
Q Consensus 145 ~~~svvyvsfGS~~~~~-~---~~~~~l~~~l~~~-~~~flw~~~~~~--~~~l~~~~~~~~~~~~~v~~w~pq---~~v 214 (335)
.+++.++|++=...... . .++.+++++|.+. +.++||.+.... ...+-+. .++. +|+.+++-.+. ..+
T Consensus 178 ~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~-l~~~-~~v~~~~~l~~~~~l~l 255 (346)
T PF02350_consen 178 APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGSDIIIEK-LKKY-DNVRLIEPLGYEEYLSL 255 (346)
T ss_dssp TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHH-HTT--TTEEEE----HHHHHHH
T ss_pred cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHH-hccc-CCEEEECCCCHHHHHHH
Confidence 66789999985555444 2 4566667777665 788999887331 1111111 1223 47777755544 488
Q ss_pred ccccCcCeEEccCCcchHH-HHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcC
Q 038830 215 LAHEATGCFLTHCGWNSTL-EALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEG 291 (335)
Q Consensus 215 L~h~~v~~fItHgG~nSv~-Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 291 (335)
|+++++ +||-.| ++. ||.+.|+|.|.+=-.++.+. .... |..+.+. .+.++|.+++++++.+
T Consensus 256 l~~a~~--vvgdSs--GI~eEa~~lg~P~v~iR~~geRqe----~r~~-~~nvlv~------~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 256 LKNADL--VVGDSS--GIQEEAPSLGKPVVNIRDSGERQE----GRER-GSNVLVG------TDPEAIIQAIEKALSD 318 (346)
T ss_dssp HHHESE--EEESSH--HHHHHGGGGT--EEECSSS-S-HH----HHHT-TSEEEET------SSHHHHHHHHHHHHH-
T ss_pred HhcceE--EEEcCc--cHHHHHHHhCCeEEEecCCCCCHH----HHhh-cceEEeC------CCHHHHHHHHHHHHhC
Confidence 999999 999999 677 99999999999822122111 1222 4444432 4799999999999976
No 104
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=96.63 E-value=0.018 Score=58.14 Aligned_cols=138 Identities=20% Similarity=0.307 Sum_probs=86.0
Q ss_pred CCCcEEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchh---h---cCCceEEEeecchh-----h
Q 038830 145 ANGSVVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSD---E---TSQKGLVVNWCPQL-----G 213 (335)
Q Consensus 145 ~~~svvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~---~---~~~~~~v~~w~pq~-----~ 213 (335)
++..|||.+|--....+++.++.-+.-|++.+..++|+.+.+...+ ..|.. . -++++.+.+-++-. .
T Consensus 756 p~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge--~rf~ty~~~~Gl~p~riifs~va~k~eHvrr~ 833 (966)
T KOG4626|consen 756 PEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE--QRFRTYAEQLGLEPDRIIFSPVAAKEEHVRRG 833 (966)
T ss_pred CCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccch--HHHHHHHHHhCCCccceeeccccchHHHHHhh
Confidence 4556999999999999999999999999999999999998653221 12211 0 12343333333222 2
Q ss_pred hccccCcCeEEccCCcchHHHHHhcCCCeeecCCCCChhhh-HHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 214 VLAHEATGCFLTHCGWNSTLEALSLGVPMVAMPLWTDQSTN-SKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 214 vL~h~~v~~fItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~N-a~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
.|..-.+.-+++. |..|.+|.+++|||||++|.-.--..- +-.+... |+|-.+.. ++++-.+.-.++-.+.
T Consensus 834 ~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~-Gl~hliak------~~eEY~~iaV~Latd~ 905 (966)
T KOG4626|consen 834 QLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTAL-GLGHLIAK------NREEYVQIAVRLATDK 905 (966)
T ss_pred hhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHHc-ccHHHHhh------hHHHHHHHHHHhhcCH
Confidence 3333333335554 678999999999999999974333332 3344445 88876643 4555444433444443
No 105
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=96.47 E-value=0.07 Score=52.73 Aligned_cols=173 Identities=9% Similarity=0.146 Sum_probs=100.7
Q ss_pred HHHhhcCCCCcEEEEEeCCcccC------C----HHHHHHHHHHHhhCCCcEEEEEeCCCCCc-------CCccchhhcC
Q 038830 138 MKWLNDRANGSVVYVSFGSMATL------K----IEEMEELPCGLKASDKYFLWVVRESEQSK-------LPENFSDETS 200 (335)
Q Consensus 138 ~~wLd~~~~~svvyvsfGS~~~~------~----~~~~~~l~~~l~~~~~~flw~~~~~~~~~-------l~~~~~~~~~ 200 (335)
..|+...+.+++|-|+.-..... + .+.+.++++.|.+.|++++++........ .-..+.+.++
T Consensus 225 ~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~ 304 (426)
T PRK10017 225 QHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVS 304 (426)
T ss_pred hhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhcc
Confidence 34655434456787776544311 2 12344566666667988887654311100 1112223333
Q ss_pred C--ceEEE--eecchh--hhccccCcCeEEccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhcccee-ecCCCC
Q 038830 201 Q--KGLVV--NWCPQL--GVLAHEATGCFLTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLK-VPADEK 273 (335)
Q Consensus 201 ~--~~~v~--~w~pq~--~vL~h~~v~~fItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~-l~~~~~ 273 (335)
. +..++ .+-|.. .+++++++ +|.. =.-++.=|+.+|||.+++++ | +....++.+. |.... ++.+
T Consensus 305 ~~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~-RlHa~I~a~~~gvP~i~i~Y--~-~K~~~~~~~l-g~~~~~~~~~-- 375 (426)
T PRK10017 305 DPARYHVVMDELNDLEMGKILGACEL--TVGT-RLHSAIISMNFGTPAIAINY--E-HKSAGIMQQL-GLPEMAIDIR-- 375 (426)
T ss_pred cccceeEecCCCChHHHHHHHhhCCE--EEEe-cchHHHHHHHcCCCEEEeee--h-HHHHHHHHHc-CCccEEechh--
Confidence 2 33443 233443 78889888 7764 23467778999999999998 3 4444555555 77654 3433
Q ss_pred CCcCHHHHHHHHHHHHcCCcH--HHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHh
Q 038830 274 GIVRREAIAHCISEILEGKRD--KEIKQNADKWRNFAKEAVAKGGSSDKNIDDFVANLI 330 (335)
Q Consensus 274 ~~~~~~~l~~~i~~ll~~~~~--~~~r~~a~~l~~~~~~a~~~ggss~~~l~~~v~~~~ 330 (335)
.++.+++.+.+.+++++.+. +.+++++.++++.+. +...++++++.
T Consensus 376 -~l~~~~Li~~v~~~~~~r~~~~~~l~~~v~~~r~~~~----------~~~~~~~~~~~ 423 (426)
T PRK10017 376 -HLLDGSLQAMVADTLGQLPALNARLAEAVSRERQTGM----------QMVQSVLERIG 423 (426)
T ss_pred -hCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHhc
Confidence 57889999999999987542 345555555555443 44555665554
No 106
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=96.41 E-value=0.043 Score=55.66 Aligned_cols=113 Identities=13% Similarity=0.187 Sum_probs=67.9
Q ss_pred CCceEEEeecchh-hhccccCcCeEEcc---CC-cchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCC
Q 038830 200 SQKGLVVNWCPQL-GVLAHEATGCFLTH---CG-WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKG 274 (335)
Q Consensus 200 ~~~~~v~~w~pq~-~vL~h~~v~~fItH---gG-~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~ 274 (335)
.+++.+.+|..+. .+|+.+++ ||.. -| .++++||+++|+|+|+-.. ..+...+.+. ..|..+...
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdv----GG~~EiV~dG-~nG~LVp~~--- 523 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPA----GGSAECFIEG-VSGFILDDA--- 523 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCC----CCcHHHcccC-CcEEEECCC---
Confidence 3667777876554 78999999 8753 23 5799999999999998764 3456666666 778888654
Q ss_pred CcCHHHHHHHH---HHHHcCCcHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHh
Q 038830 275 IVRREAIAHCI---SEILEGKRDKEIKQNADKWRNFAKEAVAKGGSSDKNIDDFVANLI 330 (335)
Q Consensus 275 ~~~~~~l~~~i---~~ll~~~~~~~~r~~a~~l~~~~~~a~~~ggss~~~l~~~v~~~~ 330 (335)
+.+.+.+++ ..+.... +...++.+..++.+...-|....++++.+-+.
T Consensus 524 --D~~aLa~ai~lA~aL~~ll------~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~ 574 (578)
T PRK15490 524 --QTVNLDQACRYAEKLVNLW------RSRTGICQQTQSFLQERFTVEHMVGTFVKTIA 574 (578)
T ss_pred --ChhhHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 344444444 2222211 11223344444444444555555555555443
No 107
>PRK14098 glycogen synthase; Provisional
Probab=96.03 E-value=0.09 Score=52.90 Aligned_cols=129 Identities=16% Similarity=0.056 Sum_probs=74.5
Q ss_pred EEEEEeCCcccCC-HHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccc---hhhcCCceEEEeecchh---hhccccCcC
Q 038830 149 VVYVSFGSMATLK-IEEMEELPCGLKASDKYFLWVVRESEQSKLPENF---SDETSQKGLVVNWCPQL---GVLAHEATG 221 (335)
Q Consensus 149 vvyvsfGS~~~~~-~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~---~~~~~~~~~v~~w~pq~---~vL~h~~v~ 221 (335)
.+++..|...... .+.+.+.+..+...+.+|+. ++.+.. ...+.+ .++.++++.+....+.. .+++.+|+
T Consensus 308 ~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvi-vG~G~~-~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~~a~aDi- 384 (489)
T PRK14098 308 PLVGVIINFDDFQGAELLAESLEKLVELDIQLVI-CGSGDK-EYEKRFQDFAEEHPEQVSVQTEFTDAFFHLAIAGLDM- 384 (489)
T ss_pred CEEEEeccccccCcHHHHHHHHHHHHhcCcEEEE-EeCCCH-HHHHHHHHHHHHCCCCEEEEEecCHHHHHHHHHhCCE-
Confidence 4556667766432 34444444445444555543 443321 111122 22345677777777764 68899999
Q ss_pred eEEccCC----cchHHHHHhcCCCeeecCCCC--ChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHH
Q 038830 222 CFLTHCG----WNSTLEALSLGVPMVAMPLWT--DQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEIL 289 (335)
Q Consensus 222 ~fItHgG----~nSv~Eal~~GVP~i~~P~~~--DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll 289 (335)
|+.-.= ..+.+||+++|+|.|+....+ |...+ ...+. +.|..+... +.+++.++|.+++
T Consensus 385 -~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~~~~-~~G~l~~~~-----d~~~la~ai~~~l 449 (489)
T PRK14098 385 -LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VSEDK-GSGFIFHDY-----TPEALVAKLGEAL 449 (489)
T ss_pred -EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CCCCC-CceeEeCCC-----CHHHHHHHHHHHH
Confidence 775332 247899999999888765432 21111 11123 567777643 7899999999876
No 108
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=95.91 E-value=0.26 Score=47.48 Aligned_cols=125 Identities=22% Similarity=0.175 Sum_probs=70.6
Q ss_pred EEEEEeCCccc-CCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchh---hhccccCcCeEE
Q 038830 149 VVYVSFGSMAT-LKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQL---GVLAHEATGCFL 224 (335)
Q Consensus 149 vvyvsfGS~~~-~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~---~vL~h~~v~~fI 224 (335)
.+.+.+|++.. ...+.+.+++.. ..+..|+.+ +..+...-.... ...+|+.+.++.|.. ..|++++++.+-
T Consensus 206 ~~i~y~G~l~~~~d~~ll~~la~~--~p~~~~vli-G~~~~~~~~~~~--~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P 280 (373)
T cd04950 206 PVIGYYGAIAEWLDLELLEALAKA--RPDWSFVLI-GPVDVSIDPSAL--LRLPNVHYLGPKPYKELPAYLAGFDVAILP 280 (373)
T ss_pred CEEEEEeccccccCHHHHHHHHHH--CCCCEEEEE-CCCcCccChhHh--ccCCCEEEeCCCCHHHHHHHHHhCCEEecC
Confidence 35555688874 333334444432 235565543 322111000111 113688888998855 688999994432
Q ss_pred c------cCC-cchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 225 T------HCG-WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 225 t------HgG-~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
. .++ -+.++|++++|+|+|+.++ ...+... + |..+..+ +.+++.++|.+++.++
T Consensus 281 ~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~~~~-~-~~~~~~~-----d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 281 FRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVRRYE-D-EVVLIAD-----DPEEFVAAIEKALLED 341 (373)
T ss_pred CccchhhhcCCcchHHHHhccCCCEEecCc-------HHHHhhc-C-cEEEeCC-----CHHHHHHHHHHHHhcC
Confidence 2 222 2469999999999998763 1222222 3 3333222 6899999999977544
No 109
>PHA01633 putative glycosyl transferase group 1
Probab=95.90 E-value=0.21 Score=47.80 Aligned_cols=86 Identities=15% Similarity=0.123 Sum_probs=55.6
Q ss_pred cCCceEEEe---ecchh---hhccccCcCeEEccC---C-cchHHHHHhcCCCeeecCC------CCCh------hhhHH
Q 038830 199 TSQKGLVVN---WCPQL---GVLAHEATGCFLTHC---G-WNSTLEALSLGVPMVAMPL------WTDQ------STNSK 256 (335)
Q Consensus 199 ~~~~~~v~~---w~pq~---~vL~h~~v~~fItHg---G-~nSv~Eal~~GVP~i~~P~------~~DQ------~~Na~ 256 (335)
.++++.+.+ ++++. .+++.+++ ||.-. | .++++||+++|+|+|+--. .+|+ ..+..
T Consensus 199 l~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~ 276 (335)
T PHA01633 199 VPANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVE 276 (335)
T ss_pred CCCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHH
Confidence 345666663 44543 77889998 77532 3 4679999999999998633 2332 22232
Q ss_pred HHH--HHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 257 YVM--DVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 257 ~v~--~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
-.. +. |.|..+. ..+.+++.++|.+++...
T Consensus 277 ~~~~~~~-g~g~~~~-----~~d~~~la~ai~~~~~~~ 308 (335)
T PHA01633 277 EYYDKEH-GQKWKIH-----KFQIEDMANAIILAFELQ 308 (335)
T ss_pred HhcCccc-Cceeeec-----CCCHHHHHHHHHHHHhcc
Confidence 222 23 5666665 358999999999986443
No 110
>PLN02275 transferase, transferring glycosyl groups
Probab=95.83 E-value=0.06 Score=51.94 Aligned_cols=74 Identities=19% Similarity=0.230 Sum_probs=52.4
Q ss_pred ceEEEe-ecchh---hhccccCcCeEEc----cCC---cchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecC
Q 038830 202 KGLVVN-WCPQL---GVLAHEATGCFLT----HCG---WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPA 270 (335)
Q Consensus 202 ~~~v~~-w~pq~---~vL~h~~v~~fIt----HgG---~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~ 270 (335)
+..+.. |.|.. .+|+.+|+ ||. ..| -++++||+++|+|+|+.... .+...+.+. +.|..+.
T Consensus 287 ~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~g----g~~eiv~~g-~~G~lv~- 358 (371)
T PLN02275 287 HVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIGELVKDG-KNGLLFS- 358 (371)
T ss_pred ceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecCC----ChHHHccCC-CCeEEEC-
Confidence 444444 78765 56999999 763 112 35799999999999996532 366667666 7888874
Q ss_pred CCCCCcCHHHHHHHHHHHH
Q 038830 271 DEKGIVRREAIAHCISEIL 289 (335)
Q Consensus 271 ~~~~~~~~~~l~~~i~~ll 289 (335)
+.+++.++|.+++
T Consensus 359 ------~~~~la~~i~~l~ 371 (371)
T PLN02275 359 ------SSSELADQLLELL 371 (371)
T ss_pred ------CHHHHHHHHHHhC
Confidence 3688888887764
No 111
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=95.68 E-value=0.15 Score=50.58 Aligned_cols=132 Identities=14% Similarity=0.163 Sum_probs=73.0
Q ss_pred cEEEEEeCCcccCC-HHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccch---hhcCCceEEE-eecchh--hhccccCc
Q 038830 148 SVVYVSFGSMATLK-IEEMEELPCGLKASDKYFLWVVRESEQSKLPENFS---DETSQKGLVV-NWCPQL--GVLAHEAT 220 (335)
Q Consensus 148 svvyvsfGS~~~~~-~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~---~~~~~~~~v~-~w~pq~--~vL~h~~v 220 (335)
..+++..|.+.... .+.+.+.+..+.+.+.+|+++ +.+. ..+.+.+. ++..++..+. ++.... .+++.+++
T Consensus 296 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~-G~g~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv 373 (476)
T cd03791 296 APLFGFVGRLTEQKGIDLLLEALPELLELGGQLVIL-GSGD-PEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADF 373 (476)
T ss_pred CCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEE-ecCC-HHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhCCE
Confidence 34566667776322 344445555554445555544 3221 11111121 2223555544 443222 57888888
Q ss_pred CeEEcc-----CCcchHHHHHhcCCCeeecCCCC--ChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHc
Q 038830 221 GCFLTH-----CGWNSTLEALSLGVPMVAMPLWT--DQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILE 290 (335)
Q Consensus 221 ~~fItH-----gG~nSv~Eal~~GVP~i~~P~~~--DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~ 290 (335)
|+.- || .+.+||+++|+|.|+-...+ |...+...-.+. |.|+.+... +.+++.+++.++++
T Consensus 374 --~l~pS~~E~~g-l~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~-~~G~~~~~~-----~~~~l~~~i~~~l~ 441 (476)
T cd03791 374 --FLMPSRFEPCG-LTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGE-GTGFVFEGY-----NADALLAALRRALA 441 (476)
T ss_pred --EECCCCCCCCc-HHHHHHhhCCCCCEECcCCCccceEeCCcCCCCC-CCeEEeCCC-----CHHHHHHHHHHHHH
Confidence 6643 33 47899999999999866532 211111100123 478888754 68999999999885
No 112
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=95.47 E-value=0.15 Score=50.88 Aligned_cols=133 Identities=11% Similarity=0.064 Sum_probs=73.3
Q ss_pred cEEEEEeCCcccCC-HHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccc---hhhcCCceEEEeecchh---hhccccCc
Q 038830 148 SVVYVSFGSMATLK-IEEMEELPCGLKASDKYFLWVVRESEQSKLPENF---SDETSQKGLVVNWCPQL---GVLAHEAT 220 (335)
Q Consensus 148 svvyvsfGS~~~~~-~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~---~~~~~~~~~v~~w~pq~---~vL~h~~v 220 (335)
..+++..|...... .+.+.+.+..+.+.+.+|+++ +.+. ..+.+.+ .++.+.+..+....++. .+++.+++
T Consensus 291 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~-G~g~-~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv 368 (473)
T TIGR02095 291 VPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVL-GTGD-PELEEALRELAERYPGNVRVIIGYDEALAHLIYAGADF 368 (473)
T ss_pred CCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEE-CCCC-HHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhCCE
Confidence 34566667776422 344445445554445666544 3321 1111222 12233455554434443 58888998
Q ss_pred CeEEccC---Cc-chHHHHHhcCCCeeecCCCC--ChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHc
Q 038830 221 GCFLTHC---GW-NSTLEALSLGVPMVAMPLWT--DQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILE 290 (335)
Q Consensus 221 ~~fItHg---G~-nSv~Eal~~GVP~i~~P~~~--DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~ 290 (335)
|+.-. |. .+.+||+++|+|.|+-...+ |.-.+...-.+. +.|+.+... +.+++.++|.+++.
T Consensus 369 --~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~-~~G~l~~~~-----d~~~la~~i~~~l~ 436 (473)
T TIGR02095 369 --ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAES-GTGFLFEEY-----DPGALLAALSRALR 436 (473)
T ss_pred --EEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCC-CceEEeCCC-----CHHHHHHHHHHHHH
Confidence 66422 32 48899999999999865532 221111000122 567777643 78899999999886
No 113
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=95.33 E-value=0.32 Score=46.49 Aligned_cols=140 Identities=18% Similarity=0.185 Sum_probs=85.2
Q ss_pred CCCChhhHHHHhhcCCCCcEEEEEeCCccc----CCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEE
Q 038830 130 FEPDIESSMKWLNDRANGSVVYVSFGSMAT----LKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLV 205 (335)
Q Consensus 130 ~~~~~~~~~~wLd~~~~~svvyvsfGS~~~----~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v 205 (335)
++| +.+..+-|... +.+.|+|=+-+..+ -....+.++++.|++.+..++..-+......+-+++ +..+
T Consensus 164 F~P-d~~vl~~lg~~-~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~~~~~~~~~------~~~i 235 (335)
T PF04007_consen 164 FKP-DPEVLKELGLD-DEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYEDQRELFEKY------GVII 235 (335)
T ss_pred CCC-ChhHHHHcCCC-CCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcchhhHHhcc------Cccc
Confidence 456 55666666643 55778777766432 233457789999998887755444433221121211 1222
Q ss_pred E-eecchhhhccccCcCeEEccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHH
Q 038830 206 V-NWCPQLGVLAHEATGCFLTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHC 284 (335)
Q Consensus 206 ~-~w~pq~~vL~h~~v~~fItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~ 284 (335)
. .-+.-.++|.++++ ||+=|| ....||..-|+|.|.. +.++-...-+++.+. | +.... -+.+++.+.
T Consensus 236 ~~~~vd~~~Ll~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~~-G--ll~~~-----~~~~ei~~~ 303 (335)
T PF04007_consen 236 PPEPVDGLDLLYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIEK-G--LLYHS-----TDPDEIVEY 303 (335)
T ss_pred cCCCCCHHHHHHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHHC-C--CeEec-----CCHHHHHHH
Confidence 2 23444589999999 999877 7789999999999954 223433445677777 5 44432 367777776
Q ss_pred HHHHH
Q 038830 285 ISEIL 289 (335)
Q Consensus 285 i~~ll 289 (335)
|++.+
T Consensus 304 v~~~~ 308 (335)
T PF04007_consen 304 VRKNL 308 (335)
T ss_pred HHHhh
Confidence 65544
No 114
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=95.32 E-value=0.1 Score=39.46 Aligned_cols=55 Identities=18% Similarity=0.148 Sum_probs=37.2
Q ss_pred cCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 226 HCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 226 HgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
++-..-+.|++++|+|+|+-+. ......+.+. .-++... +.+++.++|..+++++
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~~~~-~~~~~~~-------~~~el~~~i~~ll~~~ 63 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIFEDG-EHIITYN-------DPEELAEKIEYLLENP 63 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHcCCC-CeEEEEC-------CHHHHHHHHHHHHCCH
Confidence 3445579999999999999764 2222222221 1233332 7999999999999987
No 115
>PRK00654 glgA glycogen synthase; Provisional
Probab=95.02 E-value=0.4 Score=47.77 Aligned_cols=133 Identities=16% Similarity=0.134 Sum_probs=72.9
Q ss_pred cEEEEEeCCcccCC-HHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccc---hhhcCCceEE-Eeecchh--hhccccCc
Q 038830 148 SVVYVSFGSMATLK-IEEMEELPCGLKASDKYFLWVVRESEQSKLPENF---SDETSQKGLV-VNWCPQL--GVLAHEAT 220 (335)
Q Consensus 148 svvyvsfGS~~~~~-~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~---~~~~~~~~~v-~~w~pq~--~vL~h~~v 220 (335)
..+++..|...... .+.+.+.+..+...+.+++++ +.+.. .+.+.+ .++.+.+..+ .+|-.+. .+++.+++
T Consensus 282 ~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lviv-G~g~~-~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~~~~aDv 359 (466)
T PRK00654 282 APLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLL-GTGDP-ELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGADM 359 (466)
T ss_pred CcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEE-ecCcH-HHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHhhCCE
Confidence 34566667776422 333444444443346677655 33211 111122 2233444433 3563332 67899999
Q ss_pred CeEEcc---CCc-chHHHHHhcCCCeeecCCCC--ChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHc
Q 038830 221 GCFLTH---CGW-NSTLEALSLGVPMVAMPLWT--DQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILE 290 (335)
Q Consensus 221 ~~fItH---gG~-nSv~Eal~~GVP~i~~P~~~--DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~ 290 (335)
||.- =|. .+.+||+++|+|.|+-...+ |.-.+...-.+. +.|+.+... +.+++.++|.++++
T Consensus 360 --~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~-~~G~lv~~~-----d~~~la~~i~~~l~ 427 (466)
T PRK00654 360 --FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGE-ATGFVFDDF-----NAEDLLRALRRALE 427 (466)
T ss_pred --EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCC-CceEEeCCC-----CHHHHHHHHHHHHH
Confidence 6643 233 48999999999999865432 211111000223 567777644 78999999999885
No 116
>PHA01630 putative group 1 glycosyl transferase
Probab=94.65 E-value=0.81 Score=43.61 Aligned_cols=39 Identities=23% Similarity=0.218 Sum_probs=28.8
Q ss_pred ecchh---hhccccCcCeEE--ccCC--cchHHHHHhcCCCeeecCCC
Q 038830 208 WCPQL---GVLAHEATGCFL--THCG--WNSTLEALSLGVPMVAMPLW 248 (335)
Q Consensus 208 w~pq~---~vL~h~~v~~fI--tHgG--~nSv~Eal~~GVP~i~~P~~ 248 (335)
++|.. .+++.+++ |+ ++.. .++++||+++|+|+|+--..
T Consensus 197 ~v~~~~l~~~y~~aDv--~v~pS~~E~fgl~~lEAMA~G~PVIas~~g 242 (331)
T PHA01630 197 PLPDDDIYSLFAGCDI--LFYPVRGGAFEIPVIEALALGLDVVVTEKG 242 (331)
T ss_pred cCCHHHHHHHHHhCCE--EEECCccccCChHHHHHHHcCCCEEEeCCC
Confidence 35544 67889999 65 3332 56899999999999987643
No 117
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=94.59 E-value=0.058 Score=42.01 Aligned_cols=54 Identities=15% Similarity=0.198 Sum_probs=43.9
Q ss_pred hhHHHHhhcCCCCcEEEEEeCCcccC---CH--HHHHHHHHHHhhCCCcEEEEEeCCCC
Q 038830 135 ESSMKWLNDRANGSVVYVSFGSMATL---KI--EEMEELPCGLKASDKYFLWVVRESEQ 188 (335)
Q Consensus 135 ~~~~~wLd~~~~~svvyvsfGS~~~~---~~--~~~~~l~~~l~~~~~~flw~~~~~~~ 188 (335)
..+..|+...+.++.|+|++||.... .. ..+.+++++++..+..++..+.....
T Consensus 28 ~~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~~~ 86 (97)
T PF06722_consen 28 AVVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAAQR 86 (97)
T ss_dssp EEEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTCCC
T ss_pred CCCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHHHH
Confidence 44567999999999999999998753 22 36889999999999999988876543
No 118
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=94.51 E-value=0.24 Score=53.81 Aligned_cols=93 Identities=24% Similarity=0.219 Sum_probs=61.7
Q ss_pred CceEEEeecchh---hhccccC--cCeEEccC---C-cchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCC
Q 038830 201 QKGLVVNWCPQL---GVLAHEA--TGCFLTHC---G-WNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPAD 271 (335)
Q Consensus 201 ~~~~v~~w~pq~---~vL~h~~--v~~fItHg---G-~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~ 271 (335)
+++.+.+++++. .++..++ .+.||.-. | -.+++||+++|+|+|+-...+ ....+.+. ..|+.+...
T Consensus 548 g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII~~g-~nGlLVdP~ 622 (1050)
T TIGR02468 548 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRVL-DNGLLVDPH 622 (1050)
T ss_pred CeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHhccC-CcEEEECCC
Confidence 566666787765 4666553 12277642 3 469999999999999976533 22344444 568888654
Q ss_pred CCCCcCHHHHHHHHHHHHcCCcH-HHHHHHHHH
Q 038830 272 EKGIVRREAIAHCISEILEGKRD-KEIKQNADK 303 (335)
Q Consensus 272 ~~~~~~~~~l~~~i~~ll~~~~~-~~~r~~a~~ 303 (335)
+.++++++|.+++.+++. ++|.+++++
T Consensus 623 -----D~eaLA~AL~~LL~Dpelr~~m~~~gr~ 650 (1050)
T TIGR02468 623 -----DQQAIADALLKLVADKQLWAECRQNGLK 650 (1050)
T ss_pred -----CHHHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 789999999999988732 345555443
No 119
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=94.46 E-value=0.7 Score=45.43 Aligned_cols=79 Identities=22% Similarity=0.132 Sum_probs=54.5
Q ss_pred CCceEEEeecchh---hhccccCcCeEEc-----cCCcchHHHHHhcCCCeeecCCCCChhhhHHHHH---HHhccceee
Q 038830 200 SQKGLVVNWCPQL---GVLAHEATGCFLT-----HCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVM---DVWKMGLKV 268 (335)
Q Consensus 200 ~~~~~v~~w~pq~---~vL~h~~v~~fIt-----HgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~---~~~g~G~~l 268 (335)
.+++.+.+++|+. .+|+.+++ +|+ |-| .+++||+++|+|.|+.-..+. ....+. +. ..|...
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fg-i~~lEAMa~G~pvIa~~~ggp---~~~iv~~~~~g-~~G~l~ 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFG-IGVVEYMAAGLIPLAHASGGP---LLDIVVPWDGG-PTGFLA 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcc-cHHHHHHHcCCcEEEEcCCCC---chheeeccCCC-CceEEe
Confidence 4677788888865 78888988 553 333 488999999999998653221 111222 23 456654
Q ss_pred cCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 269 PADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 269 ~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
. +.+++.++|.++++++
T Consensus 377 ~-------d~~~la~ai~~ll~~~ 393 (419)
T cd03806 377 S-------TAEEYAEAIEKILSLS 393 (419)
T ss_pred C-------CHHHHHHHHHHHHhCC
Confidence 2 6889999999999865
No 120
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=94.41 E-value=0.44 Score=46.05 Aligned_cols=128 Identities=16% Similarity=0.229 Sum_probs=77.4
Q ss_pred CCcEEEEEeCCcc--c-CCHHHHHHHHHHHhhCCCcEEEEEeCCC--CCcCCccchhhc--CCceEEEee---cchhhhc
Q 038830 146 NGSVVYVSFGSMA--T-LKIEEMEELPCGLKASDKYFLWVVRESE--QSKLPENFSDET--SQKGLVVNW---CPQLGVL 215 (335)
Q Consensus 146 ~~svvyvsfGS~~--~-~~~~~~~~l~~~l~~~~~~flw~~~~~~--~~~l~~~~~~~~--~~~~~v~~w---~pq~~vL 215 (335)
+++.++|.+=... . ...+.+.+++++|...+.+++++..... ...+.+.+.+.. .++..+.+- .....++
T Consensus 200 ~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll 279 (365)
T TIGR03568 200 DKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLL 279 (365)
T ss_pred CCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCCCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHH
Confidence 3468888875443 2 3356799999999887766655543211 101111111111 246677653 3444899
Q ss_pred cccCcCeEEccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhcccee-ecCCCCCCcCHHHHHHHHHHHHc
Q 038830 216 AHEATGCFLTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLK-VPADEKGIVRREAIAHCISEILE 290 (335)
Q Consensus 216 ~h~~v~~fItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~-l~~~~~~~~~~~~l~~~i~~ll~ 290 (335)
.++++ +||-.+.+- .||.+.|+|.|.+= +- .-..+. |..+. +. .+.++|.+++.++++
T Consensus 280 ~~a~~--vitdSSggi-~EA~~lg~Pvv~l~---~R----~e~~~~-g~nvl~vg------~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 280 KNADA--VIGNSSSGI-IEAPSFGVPTINIG---TR----QKGRLR-ADSVIDVD------PDKEEIVKAIEKLLD 338 (365)
T ss_pred HhCCE--EEEcChhHH-HhhhhcCCCEEeec---CC----chhhhh-cCeEEEeC------CCHHHHHHHHHHHhC
Confidence 99999 999885555 99999999999762 21 111233 32322 32 368999999998543
No 121
>PLN02949 transferase, transferring glycosyl groups
Probab=94.27 E-value=1 Score=45.10 Aligned_cols=92 Identities=20% Similarity=0.108 Sum_probs=55.9
Q ss_pred CCceEEEeecchh---hhccccCcCeEEc---cCCc-chHHHHHhcCCCeeecCCCCChhhhHHHHHH--HhccceeecC
Q 038830 200 SQKGLVVNWCPQL---GVLAHEATGCFLT---HCGW-NSTLEALSLGVPMVAMPLWTDQSTNSKYVMD--VWKMGLKVPA 270 (335)
Q Consensus 200 ~~~~~v~~w~pq~---~vL~h~~v~~fIt---HgG~-nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~--~~g~G~~l~~ 270 (335)
.+++.+.+++|+. .+|+.+++ +|. +=|+ .+++||+++|+|.|+....+- ....+.+ .-..|...
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp---~~eIV~~~~~g~tG~l~-- 406 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGP---KMDIVLDEDGQQTGFLA-- 406 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCC---cceeeecCCCCcccccC--
Confidence 4677778888765 57888888 652 1222 489999999999999765320 0000111 00123322
Q ss_pred CCCCCcCHHHHHHHHHHHHcCC-c-HHHHHHHHHH
Q 038830 271 DEKGIVRREAIAHCISEILEGK-R-DKEIKQNADK 303 (335)
Q Consensus 271 ~~~~~~~~~~l~~~i~~ll~~~-~-~~~~r~~a~~ 303 (335)
-+.+++.++|.++++++ + .++|.+++++
T Consensus 407 -----~~~~~la~ai~~ll~~~~~~r~~m~~~ar~ 436 (463)
T PLN02949 407 -----TTVEEYADAILEVLRMRETERLEIAAAARK 436 (463)
T ss_pred -----CCHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 16889999999999743 2 2345555544
No 122
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=93.79 E-value=0.45 Score=45.88 Aligned_cols=186 Identities=17% Similarity=0.129 Sum_probs=102.2
Q ss_pred hhhHHHHhhcCCCCcEEEEEeCCcccCC---HHHHHHHHHHHhh--CCCcEEEEEeCCCCCcCCccchhhcCCce-EEEe
Q 038830 134 IESSMKWLNDRANGSVVYVSFGSMATLK---IEEMEELPCGLKA--SDKYFLWVVRESEQSKLPENFSDETSQKG-LVVN 207 (335)
Q Consensus 134 ~~~~~~wLd~~~~~svvyvsfGS~~~~~---~~~~~~l~~~l~~--~~~~flw~~~~~~~~~l~~~~~~~~~~~~-~v~~ 207 (335)
.....+-+....++.++.+--||..+.= ..-+.+.++.|.+ .+.+|+.-+-......+-..+ ...+. ...-
T Consensus 175 r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~~~~~~~~~---~~~~~~~~~~ 251 (381)
T COG0763 175 REAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAKYRRIIEEA---LKWEVAGLSL 251 (381)
T ss_pred HHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHHHHHHHHHH---hhccccCceE
Confidence 3445555555567889999999987411 1223444444542 345665443322111111111 11111 1112
Q ss_pred ec-chh--hhccccCcCeEEccCCcchHHHHHhcCCCeeecCC-CCChhhhHHHHHHHhcccee-------ecCC-CCCC
Q 038830 208 WC-PQL--GVLAHEATGCFLTHCGWNSTLEALSLGVPMVAMPL-WTDQSTNSKYVMDVWKMGLK-------VPAD-EKGI 275 (335)
Q Consensus 208 w~-pq~--~vL~h~~v~~fItHgG~nSv~Eal~~GVP~i~~P~-~~DQ~~Na~~v~~~~g~G~~-------l~~~-~~~~ 275 (335)
++ ++. .++..+|+ .+.-||-. ++|+..+|+|||+.=- ..=-+.-+++....|=+++- +-++ -...
T Consensus 252 ~~~~~~~~~a~~~aD~--al~aSGT~-tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~ 328 (381)
T COG0763 252 ILIDGEKRKAFAAADA--ALAASGTA-TLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQED 328 (381)
T ss_pred EecCchHHHHHHHhhH--HHHhccHH-HHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhh
Confidence 22 222 68888888 77777764 6899999999996311 11123345555555433321 1000 0125
Q ss_pred cCHHHHHHHHHHHHcCC-cHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 038830 276 VRREAIAHCISEILEGK-RDKEIKQNADKWRNFAKEAVAKGGSSDKNIDDFVANL 329 (335)
Q Consensus 276 ~~~~~l~~~i~~ll~~~-~~~~~r~~a~~l~~~~~~a~~~ggss~~~l~~~v~~~ 329 (335)
.+++.|.+++.+++.++ +.+.+++..+++++.++ .++++....+.+++.+
T Consensus 329 ~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~----~~~~~e~aA~~vl~~~ 379 (381)
T COG0763 329 CTPENLARALEELLLNGDRREALKEKFRELHQYLR----EDPASEIAAQAVLELL 379 (381)
T ss_pred cCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHc----CCcHHHHHHHHHHHHh
Confidence 78999999999999877 23556666666666554 4456666666666554
No 123
>PLN02316 synthase/transferase
Probab=93.49 E-value=1.9 Score=47.08 Aligned_cols=114 Identities=11% Similarity=0.044 Sum_probs=65.3
Q ss_pred CceEEEeecchh---hhccccCcCeEEcc----CCcchHHHHHhcCCCeeecCCCC--Chhhh-------HHHHHHHhcc
Q 038830 201 QKGLVVNWCPQL---GVLAHEATGCFLTH----CGWNSTLEALSLGVPMVAMPLWT--DQSTN-------SKYVMDVWKM 264 (335)
Q Consensus 201 ~~~~v~~w~pq~---~vL~h~~v~~fItH----gG~nSv~Eal~~GVP~i~~P~~~--DQ~~N-------a~~v~~~~g~ 264 (335)
+++.+....+.. .+++.+|+ |+.- +=-.+.+||+++|+|.|+-...+ |.... +...-.. +.
T Consensus 900 ~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~-~t 976 (1036)
T PLN02316 900 DRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLE-PN 976 (1036)
T ss_pred CeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccC-Cc
Confidence 455554433443 68899998 8843 22468999999999888754432 22111 1000002 45
Q ss_pred ceeecCCCCCCcCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 038830 265 GLKVPADEKGIVRREAIAHCISEILEGKRDKEIKQNADKWRNFAKEAVAKGGSSDKNIDDFVA 327 (335)
Q Consensus 265 G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~ggss~~~l~~~v~ 327 (335)
|+.+... +.+.+..+|.+++.. +.+....+++..++++...-|-.....++.+
T Consensus 977 Gflf~~~-----d~~aLa~AL~raL~~-----~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~ 1029 (1036)
T PLN02316 977 GFSFDGA-----DAAGVDYALNRAISA-----WYDGRDWFNSLCKRVMEQDWSWNRPALDYME 1029 (1036)
T ss_pred eEEeCCC-----CHHHHHHHHHHHHhh-----hhhhHHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 7777643 788999999999864 2233334555555555444443344444443
No 124
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=93.17 E-value=1.7 Score=44.63 Aligned_cols=224 Identities=14% Similarity=0.098 Sum_probs=113.6
Q ss_pred cccEEEEcChHHhhHHHHHHHhccC---C-cceeccCCCCccccccc------------------------ccccccCcc
Q 038830 77 KADWILCNTFYELEKEVTEWLGKHW---L-LRTIGPTLPSIYLDKQI------------------------EDDKEYGFS 128 (335)
Q Consensus 77 ~~~~vl~nsf~elE~~~~~~~~~~~---~-v~~vGPl~~~~~~~~~~------------------------~~~~~~~~~ 128 (335)
+.|.+++=.++++--.....+++.. | +++|.|-+..-- .++. +....+-+|
T Consensus 310 kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVsPqVWAWR-~~Rikki~k~vD~ll~IfPFE~~~y~~~gv~v~yVGH 388 (608)
T PRK01021 310 NPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVCPSIWAWR-PKRKTILEKYLDLLLLILPFEQNLFKDSPLRTVYLGH 388 (608)
T ss_pred CCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECccceeeC-cchHHHHHHHhhhheecCccCHHHHHhcCCCeEEECC
Confidence 5788888788887777777777764 6 788888654210 0000 000011111
Q ss_pred -CC-----CCChhhHHHHhhcCCCCcEEEEEeCCcccCCHHHHHHHHHHHh--h--CCCcEEEEEeCCCCCcCCccchhh
Q 038830 129 -IF-----EPDIESSMKWLNDRANGSVVYVSFGSMATLKIEEMEELPCGLK--A--SDKYFLWVVRESEQSKLPENFSDE 198 (335)
Q Consensus 129 -~~-----~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~l~~~l~--~--~~~~flw~~~~~~~~~l~~~~~~~ 198 (335)
+. .++.++..+-+...+++++|-+--||....=...+..++++.+ . .+..|+....... ..+.+.+.
T Consensus 389 PL~d~i~~~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~~l~fvvp~a~~~---~~~~i~~~ 465 (608)
T PRK01021 389 PLVETISSFSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLASTHQLLVSSANPK---YDHLILEV 465 (608)
T ss_pred cHHhhcccCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhccCeEEEEecCchh---hHHHHHHH
Confidence 00 1112223333333456789999999987422223333444443 2 2345544322111 01112221
Q ss_pred cCC----ceEEEeecchhhhccccCcCeEEccCCcchHHHHHhcCCCeeecC-CCCChhhhHHHHHHH--hcc-------
Q 038830 199 TSQ----KGLVVNWCPQLGVLAHEATGCFLTHCGWNSTLEALSLGVPMVAMP-LWTDQSTNSKYVMDV--WKM------- 264 (335)
Q Consensus 199 ~~~----~~~v~~w~pq~~vL~h~~v~~fItHgG~nSv~Eal~~GVP~i~~P-~~~DQ~~Na~~v~~~--~g~------- 264 (335)
..+ ...++.--...++++.+++ .+.-+|- .++|+...|+||++.= ...=-+.-++++.+. .=+
T Consensus 466 ~~~~~~~~~~ii~~~~~~~~m~aaD~--aLaaSGT-aTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIa 542 (608)
T PRK01021 466 LQQEGCLHSHIVPSQFRYELMRECDC--ALAKCGT-IVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIIL 542 (608)
T ss_pred HhhcCCCCeEEecCcchHHHHHhcCe--eeecCCH-HHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhc
Confidence 211 1122210012488999998 8888876 4789999999999642 221122345555541 011
Q ss_pred ceeecCC--C-CCCcCHHHHHHHHHHHHcCCc-HHHHHHHHHHHHHHH
Q 038830 265 GLKVPAD--E-KGIVRREAIAHCISEILEGKR-DKEIKQNADKWRNFA 308 (335)
Q Consensus 265 G~~l~~~--~-~~~~~~~~l~~~i~~ll~~~~-~~~~r~~a~~l~~~~ 308 (335)
|..+-++ . ....+++.|.+++ ++|.+++ .+++++..+++++.+
T Consensus 543 gr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~~l~~lr~~L 589 (608)
T PRK01021 543 GSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKDACRDLYQAM 589 (608)
T ss_pred CCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHh
Confidence 1121111 0 1257899999997 7887763 245555555555544
No 125
>PLN02846 digalactosyldiacylglycerol synthase
Probab=92.91 E-value=1 Score=45.07 Aligned_cols=71 Identities=14% Similarity=0.091 Sum_probs=49.8
Q ss_pred eecchhhhccccCcCeEEccC----CcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHH
Q 038830 207 NWCPQLGVLAHEATGCFLTHC----GWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIA 282 (335)
Q Consensus 207 ~w~pq~~vL~h~~v~~fItHg----G~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~ 282 (335)
++.+..+++...++ ||.-+ =-++++||+++|+|+|+.-..+ | ..+.+. +-|.... +.+++.
T Consensus 290 G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v~~~-~ng~~~~-------~~~~~a 354 (462)
T PLN02846 290 GRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFFKQF-PNCRTYD-------DGKGFV 354 (462)
T ss_pred CCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-ceeecC-CceEecC-------CHHHHH
Confidence 45555578888888 87663 3579999999999999976443 2 334333 4444442 577899
Q ss_pred HHHHHHHcCC
Q 038830 283 HCISEILEGK 292 (335)
Q Consensus 283 ~~i~~ll~~~ 292 (335)
+++.+++.++
T Consensus 355 ~ai~~~l~~~ 364 (462)
T PLN02846 355 RATLKALAEE 364 (462)
T ss_pred HHHHHHHccC
Confidence 9999998754
No 126
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=92.72 E-value=0.68 Score=47.00 Aligned_cols=90 Identities=12% Similarity=0.176 Sum_probs=63.6
Q ss_pred CceEEEeecc--hh-hhccccCcCeEEccC---CcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCC
Q 038830 201 QKGLVVNWCP--QL-GVLAHEATGCFLTHC---GWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKG 274 (335)
Q Consensus 201 ~~~~v~~w~p--q~-~vL~h~~v~~fItHg---G~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~ 274 (335)
.++.+.++.+ +. .++.+..+ +|.=+ |.++.+||+++|+|+| ......+|++. .=|..+.
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d~-~NG~li~----- 473 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEHN-KNGYIID----- 473 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEcC-CCcEEeC-----
Confidence 4566667777 44 78888888 77654 7779999999999999 33445566665 6676662
Q ss_pred CcCHHHHHHHHHHHHcCCcH-HHHHHHHHHHHHH
Q 038830 275 IVRREAIAHCISEILEGKRD-KEIKQNADKWRNF 307 (335)
Q Consensus 275 ~~~~~~l~~~i~~ll~~~~~-~~~r~~a~~l~~~ 307 (335)
+..++.++|..+|.+.+. ..+...+-+..+.
T Consensus 474 --d~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~ 505 (519)
T TIGR03713 474 --DISELLKALDYYLDNLKNWNYSLAYSIKLIDD 505 (519)
T ss_pred --CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 688999999999988732 3444444444433
No 127
>PRK10125 putative glycosyl transferase; Provisional
Probab=92.60 E-value=3.1 Score=40.79 Aligned_cols=100 Identities=16% Similarity=0.101 Sum_probs=58.1
Q ss_pred HHHHHHHHHhhCCCcE-EEEEeCCCCCcCCccchhhcCCceEEEeecc-h---hhhccccCcCeEEccC----CcchHHH
Q 038830 164 EMEELPCGLKASDKYF-LWVVRESEQSKLPENFSDETSQKGLVVNWCP-Q---LGVLAHEATGCFLTHC----GWNSTLE 234 (335)
Q Consensus 164 ~~~~l~~~l~~~~~~f-lw~~~~~~~~~l~~~~~~~~~~~~~v~~w~p-q---~~vL~h~~v~~fItHg----G~nSv~E 234 (335)
.+..+++++...+.++ +++++.... .. ..++...++.. + ..+++.+++ ||.-. --++++|
T Consensus 257 g~~~li~A~~~l~~~~~L~ivG~g~~-~~--------~~~v~~~g~~~~~~~l~~~y~~aDv--fV~pS~~Egfp~vilE 325 (405)
T PRK10125 257 TDQQLVREMMALGDKIELHTFGKFSP-FT--------AGNVVNHGFETDKRKLMSALNQMDA--LVFSSRVDNYPLILCE 325 (405)
T ss_pred cHHHHHHHHHhCCCCeEEEEEcCCCc-cc--------ccceEEecCcCCHHHHHHHHHhCCE--EEECCccccCcCHHHH
Confidence 3456777776654443 445554211 11 12333344442 2 256777888 76533 3478999
Q ss_pred HHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHH
Q 038830 235 ALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCI 285 (335)
Q Consensus 235 al~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i 285 (335)
|+++|+|+|+-...+ ... +++. +.|..+... +.+++++++
T Consensus 326 AmA~G~PVVat~~gG----~~E-iv~~-~~G~lv~~~-----d~~~La~~~ 365 (405)
T PRK10125 326 ALSIGVPVIATHSDA----ARE-VLQK-SGGKTVSEE-----EVLQLAQLS 365 (405)
T ss_pred HHHcCCCEEEeCCCC----hHH-hEeC-CcEEEECCC-----CHHHHHhcc
Confidence 999999999987754 122 2334 568888754 567777643
No 128
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=91.64 E-value=0.5 Score=40.60 Aligned_cols=49 Identities=18% Similarity=0.146 Sum_probs=36.3
Q ss_pred CCceEEEeecch-h---hhccccCcCeEEccCC----cchHHHHHhcCCCeeecCCCCC
Q 038830 200 SQKGLVVNWCPQ-L---GVLAHEATGCFLTHCG----WNSTLEALSLGVPMVAMPLWTD 250 (335)
Q Consensus 200 ~~~~~v~~w~pq-~---~vL~h~~v~~fItHgG----~nSv~Eal~~GVP~i~~P~~~D 250 (335)
.+++.+.+++++ . .+++.+++ +++-.. .++++||+++|+|+|+-+..+.
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~ 216 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGGP 216 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCCc
Confidence 357788887622 2 34444888 777766 6899999999999999876543
No 129
>PLN02939 transferase, transferring glycosyl groups
Probab=90.44 E-value=4.6 Score=43.78 Aligned_cols=82 Identities=7% Similarity=0.120 Sum_probs=52.6
Q ss_pred CceEEEeecchh---hhccccCcCeEEccC----CcchHHHHHhcCCCeeecCCCC--Chhhh--HHHH-HHHhccceee
Q 038830 201 QKGLVVNWCPQL---GVLAHEATGCFLTHC----GWNSTLEALSLGVPMVAMPLWT--DQSTN--SKYV-MDVWKMGLKV 268 (335)
Q Consensus 201 ~~~~v~~w~pq~---~vL~h~~v~~fItHg----G~nSv~Eal~~GVP~i~~P~~~--DQ~~N--a~~v-~~~~g~G~~l 268 (335)
+++.+..+.+.. .+++.+++ ||.-. -..+.+||+++|+|.|+-...+ |-..+ ...+ .+. +.|..+
T Consensus 837 drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg-~NGfLf 913 (977)
T PLN02939 837 NNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVEL-RNGFTF 913 (977)
T ss_pred CeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCC-CceEEe
Confidence 456666777654 58999999 88532 2358999999999999866543 21111 1111 112 456666
Q ss_pred cCCCCCCcCHHHHHHHHHHHHc
Q 038830 269 PADEKGIVRREAIAHCISEILE 290 (335)
Q Consensus 269 ~~~~~~~~~~~~l~~~i~~ll~ 290 (335)
... +.+++.++|.+++.
T Consensus 914 ~~~-----D~eaLa~AL~rAL~ 930 (977)
T PLN02939 914 LTP-----DEQGLNSALERAFN 930 (977)
T ss_pred cCC-----CHHHHHHHHHHHHH
Confidence 543 78888888888764
No 130
>PLN02501 digalactosyldiacylglycerol synthase
Probab=88.30 E-value=2.8 Score=43.92 Aligned_cols=75 Identities=16% Similarity=0.070 Sum_probs=50.4
Q ss_pred eEEEeecchh-hhccccCcCeEEcc----CCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcC
Q 038830 203 GLVVNWCPQL-GVLAHEATGCFLTH----CGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVR 277 (335)
Q Consensus 203 ~~v~~w~pq~-~vL~h~~v~~fItH----gG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~ 277 (335)
+.+.++.++. .+++..++ ||.- +=-++++||+++|+|+|+-...+... +.+. +.|. +. + +
T Consensus 603 V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V~~g-~nGl-l~-~-----D 667 (794)
T PLN02501 603 LNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----FRSF-PNCL-TY-K-----T 667 (794)
T ss_pred EEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----Eeec-CCeE-ec-C-----C
Confidence 3344566654 58888888 7653 22578999999999999977654322 2222 2232 22 2 6
Q ss_pred HHHHHHHHHHHHcCC
Q 038830 278 REAIAHCISEILEGK 292 (335)
Q Consensus 278 ~~~l~~~i~~ll~~~ 292 (335)
.+++.++|.+++.++
T Consensus 668 ~EafAeAI~~LLsd~ 682 (794)
T PLN02501 668 SEDFVAKVKEALANE 682 (794)
T ss_pred HHHHHHHHHHHHhCc
Confidence 899999999999876
No 131
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=87.82 E-value=1.8 Score=40.62 Aligned_cols=143 Identities=14% Similarity=0.105 Sum_probs=78.7
Q ss_pred HHHhhcCCCCcEEEEEeC-Ccc--cCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEe--ecchh
Q 038830 138 MKWLNDRANGSVVYVSFG-SMA--TLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVN--WCPQL 212 (335)
Q Consensus 138 ~~wLd~~~~~svvyvsfG-S~~--~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~--w~pq~ 212 (335)
.+++....+++.|.+.-| |.. ..+.+.+.++++.|.+.+.++++..+.......-+.+.+..+.. .+.+ -++|.
T Consensus 170 ~~~~~~~~~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~e~~~~~~i~~~~~~~-~l~g~~sL~el 248 (319)
T TIGR02193 170 VAFLGHALPAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDAEKQRAERIAEALPGA-VVLPKMSLAEV 248 (319)
T ss_pred hhhhhccCCCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHhhCCCC-eecCCCCHHHH
Confidence 345544334455555555 443 45678899999999776777776544332111112222222222 2332 24454
Q ss_pred -hhccccCcCeEEccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhcccee-ecCCCCCCcCHHHHHHHHHHHH
Q 038830 213 -GVLAHEATGCFLTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLK-VPADEKGIVRREAIAHCISEIL 289 (335)
Q Consensus 213 -~vL~h~~v~~fItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~-l~~~~~~~~~~~~l~~~i~~ll 289 (335)
.+++++++ ||+.- .+-++=|.+.|+|.|++ ++ +.+..+.- -||-... +.......++.+++.+++++++
T Consensus 249 ~ali~~a~l--~I~~D-Sgp~HlAaa~g~P~i~l--fg--~t~p~~~~-P~~~~~~~~~~~~~~~I~~~~V~~ai~~~~ 319 (319)
T TIGR02193 249 AALLAGADA--VVGVD-TGLTHLAAALDKPTVTL--YG--ATDPGRTG-GYGKPNVALLGESGANPTPDEVLAALEELL 319 (319)
T ss_pred HHHHHcCCE--EEeCC-ChHHHHHHHcCCCEEEE--EC--CCCHhhcc-cCCCCceEEccCccCCCCHHHHHHHHHhhC
Confidence 89999999 99874 55677788999999975 21 11111110 0121111 1111123689999999998764
No 132
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=87.02 E-value=4.9 Score=40.14 Aligned_cols=102 Identities=13% Similarity=0.099 Sum_probs=66.3
Q ss_pred ecchh---hhccccCcCeEEcc---CCc-chHHHHHhcCCC----eeecCCCCChhhhHHHHHHHhccceeecCCCCCCc
Q 038830 208 WCPQL---GVLAHEATGCFLTH---CGW-NSTLEALSLGVP----MVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIV 276 (335)
Q Consensus 208 w~pq~---~vL~h~~v~~fItH---gG~-nSv~Eal~~GVP----~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~ 276 (335)
.+++. .+++.+++ |+.- =|. ++++||+++|+| +|+--..+- +..+ +-|+.++..
T Consensus 343 ~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~----~~~l----~~gllVnP~----- 407 (456)
T TIGR02400 343 SYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGA----AQEL----NGALLVNPY----- 407 (456)
T ss_pred CCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCC----hHHh----CCcEEECCC-----
Confidence 44554 67889999 7753 364 588899999999 666544332 1212 347777654
Q ss_pred CHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHh
Q 038830 277 RREAIAHCISEILEGKRDKEIKQNADKWRNFAKEAVAKGGSSDKNIDDFVANLI 330 (335)
Q Consensus 277 ~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~ggss~~~l~~~v~~~~ 330 (335)
+.++++++|.++++.+.. +.+++.+++++.+.+ -+...=.++|++.+.
T Consensus 408 d~~~lA~aI~~aL~~~~~-er~~r~~~~~~~v~~-----~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 408 DIDGMADAIARALTMPLE-EREERHRAMMDKLRK-----NDVQRWREDFLSDLN 455 (456)
T ss_pred CHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHhh-----CCHHHHHHHHHHHhh
Confidence 789999999999976522 455555555555432 455555667777664
No 133
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=86.81 E-value=3.4 Score=41.18 Aligned_cols=102 Identities=14% Similarity=0.138 Sum_probs=60.1
Q ss_pred eecchh---hhccccCcCeEEc---cCCc-chHHHHHhcCCC----eeecCCCCChhhhHHHHHHHhccceeecCCCCCC
Q 038830 207 NWCPQL---GVLAHEATGCFLT---HCGW-NSTLEALSLGVP----MVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGI 275 (335)
Q Consensus 207 ~w~pq~---~vL~h~~v~~fIt---HgG~-nSv~Eal~~GVP----~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~ 275 (335)
+++++. .+++.+++ ||. +-|. .+++||+++|+| +|+--..+--.. . .-|+.++..
T Consensus 347 g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~-------~-~~g~lv~p~---- 412 (460)
T cd03788 347 RSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE-------L-SGALLVNPY---- 412 (460)
T ss_pred CCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEeccccchhh-------c-CCCEEECCC----
Confidence 566665 67889999 663 3454 578999999999 554432221110 1 346777654
Q ss_pred cCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 038830 276 VRREAIAHCISEILEGKRDKEIKQNADKWRNFAKEAVAKGGSSDKNIDDFVANL 329 (335)
Q Consensus 276 ~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~ggss~~~l~~~v~~~ 329 (335)
+.++++++|.++++++.. +.+++.++.++.+. .-+...-.++|++++
T Consensus 413 -d~~~la~ai~~~l~~~~~-e~~~~~~~~~~~v~-----~~~~~~w~~~~l~~l 459 (460)
T cd03788 413 -DIDEVADAIHRALTMPLE-ERRERHRKLREYVR-----THDVQAWANSFLDDL 459 (460)
T ss_pred -CHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHH-----hCCHHHHHHHHHHhh
Confidence 789999999999986521 22333333333322 234444455666554
No 134
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=86.46 E-value=23 Score=31.51 Aligned_cols=130 Identities=20% Similarity=0.317 Sum_probs=70.0
Q ss_pred EEEEEeCCccc-CCHHHHHHHHHHHhhCCC--cEEEEEeCCCCC--cCCccchhhc--CCceEEEeecch---hhhcccc
Q 038830 149 VVYVSFGSMAT-LKIEEMEELPCGLKASDK--YFLWVVRESEQS--KLPENFSDET--SQKGLVVNWCPQ---LGVLAHE 218 (335)
Q Consensus 149 vvyvsfGS~~~-~~~~~~~~l~~~l~~~~~--~flw~~~~~~~~--~l~~~~~~~~--~~~~~v~~w~pq---~~vL~h~ 218 (335)
.+++..|.... .....+.+.+..+..... .+ +.++..... .+.. ..... .+++...++.++ ..++..+
T Consensus 200 ~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~-~~~~~~~~~~v~~~g~~~~~~~~~~~~~~ 277 (381)
T COG0438 200 FVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKL-VIVGDGPERREELEK-LAKKLGLEDNVKFLGYVPDEELAELLASA 277 (381)
T ss_pred eEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEE-EEEcCCCccHHHHHH-HHHHhCCCCcEEEecccCHHHHHHHHHhC
Confidence 46666676554 233444444444444332 33 333332211 1111 11122 245666788882 2567767
Q ss_pred CcCeEEcc---CCcc-hHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 219 ATGCFLTH---CGWN-STLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 219 ~v~~fItH---gG~n-Sv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
++ ++.- .|.+ ++.||+++|+|+|.-... .....+.+. +.|. +... ...+++..++..++++.
T Consensus 278 ~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~----~~~e~~~~~-~~g~-~~~~----~~~~~~~~~i~~~~~~~ 343 (381)
T COG0438 278 DV--FVLPSLSEGFGLVLLEAMAAGTPVIASDVG----GIPEVVEDG-ETGL-LVPP----GDVEELADALEQLLEDP 343 (381)
T ss_pred CE--EEeccccccchHHHHHHHhcCCcEEECCCC----ChHHHhcCC-CceE-ecCC----CCHHHHHHHHHHHhcCH
Confidence 76 5554 3543 469999999999876542 222233322 2366 3322 15789999999998775
No 135
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=86.36 E-value=6.1 Score=39.25 Aligned_cols=128 Identities=11% Similarity=0.156 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHhh-CCCcEEEEEeCCCCCcCCccch--hhcCCceEEE-eecc-hh-hhccccCcCeEEccCC--cchHH
Q 038830 162 IEEMEELPCGLKA-SDKYFLWVVRESEQSKLPENFS--DETSQKGLVV-NWCP-QL-GVLAHEATGCFLTHCG--WNSTL 233 (335)
Q Consensus 162 ~~~~~~l~~~l~~-~~~~flw~~~~~~~~~l~~~~~--~~~~~~~~v~-~w~p-q~-~vL~h~~v~~fItHgG--~nSv~ 233 (335)
..+++.+....++ ++..|=...... ..+.+. ++. +|..+. ++.+ +. .++..+++=.-++|+. .+++.
T Consensus 291 s~~I~~i~~Lv~~lPd~~f~Iga~te----~s~kL~~L~~y-~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~ 365 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYHFHIAALTE----MSSKLMSLDKY-DNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVR 365 (438)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEecCc----ccHHHHHHHhc-CCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHH
Confidence 4555555555544 345554322221 112221 233 555555 6777 33 8999999988888876 58999
Q ss_pred HHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Q 038830 234 EALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGKRDKEIKQNADKWRNFA 308 (335)
Q Consensus 234 Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~ 308 (335)
||+.+|+|+++.=.... |..++.+ |..+..+ +.+++.++|.++|.+++ .++++..+-++.+
T Consensus 366 eA~~~G~pI~afd~t~~---~~~~i~~----g~l~~~~-----~~~~m~~~i~~lL~d~~--~~~~~~~~q~~~a 426 (438)
T TIGR02919 366 RAFEYNLLILGFEETAH---NRDFIAS----ENIFEHN-----EVDQLISKLKDLLNDPN--QFRELLEQQREHA 426 (438)
T ss_pred HHHHcCCcEEEEecccC---CcccccC----CceecCC-----CHHHHHHHHHHHhcCHH--HHHHHHHHHHHHh
Confidence 99999999998643322 2222222 4445433 68999999999998773 4555554444433
No 136
>PLN00142 sucrose synthase
Probab=86.34 E-value=3.8 Score=43.72 Aligned_cols=50 Identities=18% Similarity=0.285 Sum_probs=37.0
Q ss_pred chHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHH
Q 038830 230 NSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEIL 289 (335)
Q Consensus 230 nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll 289 (335)
.+++||+++|+|+|+-... -....+++. ..|..++.. +.+++.++|.+++
T Consensus 681 LvvLEAMA~GlPVVATdvG----G~~EIV~dG-~tG~LV~P~-----D~eaLA~aI~~lL 730 (815)
T PLN00142 681 LTVVEAMTCGLPTFATCQG----GPAEIIVDG-VSGFHIDPY-----HGDEAANKIADFF 730 (815)
T ss_pred HHHHHHHHcCCCEEEcCCC----CHHHHhcCC-CcEEEeCCC-----CHHHHHHHHHHHH
Confidence 5899999999999986543 345556665 678888754 6788888877654
No 137
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=85.82 E-value=4.3 Score=43.25 Aligned_cols=79 Identities=16% Similarity=0.155 Sum_probs=51.1
Q ss_pred CceEEEeec-chh---hhccc-cC-cCeEEcc----CCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecC
Q 038830 201 QKGLVVNWC-PQL---GVLAH-EA-TGCFLTH----CGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPA 270 (335)
Q Consensus 201 ~~~~v~~w~-pq~---~vL~h-~~-v~~fItH----gG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~ 270 (335)
+++.+.++. +.. .++.+ ++ .+.||.= +-..+++||+++|+|+|+--.. .....+.+. ..|..++.
T Consensus 619 g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~G----G~~EiV~dg-~tGfLVdp 693 (784)
T TIGR02470 619 GQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFG----GPLEIIQDG-VSGFHIDP 693 (784)
T ss_pred CeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCC----CHHHHhcCC-CcEEEeCC
Confidence 556655653 322 34443 22 1226642 2246999999999999986543 355566666 67888875
Q ss_pred CCCCCcCHHHHHHHHHHHH
Q 038830 271 DEKGIVRREAIAHCISEIL 289 (335)
Q Consensus 271 ~~~~~~~~~~l~~~i~~ll 289 (335)
. +.+++.++|.+++
T Consensus 694 ~-----D~eaLA~aL~~ll 707 (784)
T TIGR02470 694 Y-----HGEEAAEKIVDFF 707 (784)
T ss_pred C-----CHHHHHHHHHHHH
Confidence 4 6888999998876
No 138
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=83.03 E-value=4.5 Score=38.75 Aligned_cols=146 Identities=18% Similarity=0.234 Sum_probs=73.5
Q ss_pred HHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEe-ecchhhhccccCcCeEEccCCcchHHHHHhcCCCee
Q 038830 165 MEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVN-WCPQLGVLAHEATGCFLTHCGWNSTLEALSLGVPMV 243 (335)
Q Consensus 165 ~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~-w~pq~~vL~h~~v~~fItHgG~nSv~Eal~~GVP~i 243 (335)
...+. .+...+..+++...+........ + ....++...+. ..+-.++|..+++ .||-.. ..+.|.+..+.|+|
T Consensus 219 ~~~l~-~~~~~~~~li~k~Hp~~~~~~~~-~-~~~~~~i~~~~~~~~~~~ll~~aDi--LITDyS-Si~fD~~~l~KPii 292 (369)
T PF04464_consen 219 FEKLN-FLLKNNYVLIIKPHPNMKKKFKD-F-KEDNSNIIFVSDNEDIYDLLAAADI--LITDYS-SIIFDFLLLNKPII 292 (369)
T ss_dssp HHHHH-HHHTTTEEEEE--SHHHHTT------TT-TTTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EE
T ss_pred HHHHH-HHhCCCcEEEEEeCchhhhchhh-h-hccCCcEEECCCCCCHHHHHHhcCE--EEEech-hHHHHHHHhCCCEE
Confidence 44455 55555665555444321111111 0 11234555543 4455699999999 999984 47889999999999
Q ss_pred ecCCCCChhhhHHHHHHHhccceeecCCCCC--CcCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCChHHHH
Q 038830 244 AMPLWTDQSTNSKYVMDVWKMGLKVPADEKG--IVRREAIAHCISEILEGKRDKEIKQNADKWRNFAKEAVAKGGSSDKN 321 (335)
Q Consensus 244 ~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~--~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~ggss~~~ 321 (335)
....-.|++.+. . |.-.......-| .-+.++|.++|..++.++. .++++.++..+++-. -..|.++.+-
T Consensus 293 fy~~D~~~Y~~~-----r-g~~~~~~~~~pg~~~~~~~eL~~~i~~~~~~~~--~~~~~~~~~~~~~~~-~~Dg~s~eri 363 (369)
T PF04464_consen 293 FYQPDLEEYEKE-----R-GFYFDYEEDLPGPIVYNFEELIEAIENIIENPD--EYKEKREKFRDKFFK-YNDGNSSERI 363 (369)
T ss_dssp EE-TTTTTTTTT-----S-SBSS-TTTSSSS-EESSHHHHHHHHTTHHHHHH--HTHHHHHHHHHHHST-T--S-HHHHH
T ss_pred EEeccHHHHhhc-----c-CCCCchHhhCCCceeCCHHHHHHHHHhhhhCCH--HHHHHHHHHHHHhCC-CCCchHHHHH
Confidence 877655555332 2 322222111011 2467899999998886542 455556666666543 2445555554
Q ss_pred HHHH
Q 038830 322 IDDF 325 (335)
Q Consensus 322 l~~~ 325 (335)
++.+
T Consensus 364 ~~~I 367 (369)
T PF04464_consen 364 VNYI 367 (369)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 139
>PRK14099 glycogen synthase; Provisional
Probab=81.04 E-value=21 Score=35.81 Aligned_cols=133 Identities=14% Similarity=0.171 Sum_probs=64.7
Q ss_pred EEEEeCCcccCC-HHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccch---hhcCCce-EEEeecchh-hhc-cccCcCe
Q 038830 150 VYVSFGSMATLK-IEEMEELPCGLKASDKYFLWVVRESEQSKLPENFS---DETSQKG-LVVNWCPQL-GVL-AHEATGC 222 (335)
Q Consensus 150 vyvsfGS~~~~~-~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~---~~~~~~~-~v~~w~pq~-~vL-~h~~v~~ 222 (335)
++...|...... .+.+.+.+..+.+.+.+++.+ +.+. ..+.+.+. ++.+++. .+.+|-.+. ..+ +.+++
T Consensus 297 li~~VgRL~~~KG~d~Li~A~~~l~~~~~~lviv-G~G~-~~~~~~l~~l~~~~~~~v~~~~G~~~~l~~~~~a~aDi-- 372 (485)
T PRK14099 297 LLGVISRLSWQKGLDLLLEALPTLLGEGAQLALL-GSGD-AELEARFRAAAQAYPGQIGVVIGYDEALAHLIQAGADA-- 372 (485)
T ss_pred EEEEEecCCccccHHHHHHHHHHHHhcCcEEEEE-ecCC-HHHHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHhcCCE--
Confidence 444456655322 233444334443445555543 3321 11112221 2223343 345663333 333 45777
Q ss_pred EEcc---CC-cchHHHHHhcCCCeeecCCCC--ChhhhHH-HH--HHHhccceeecCCCCCCcCHHHHHHHHHH---HHc
Q 038830 223 FLTH---CG-WNSTLEALSLGVPMVAMPLWT--DQSTNSK-YV--MDVWKMGLKVPADEKGIVRREAIAHCISE---ILE 290 (335)
Q Consensus 223 fItH---gG-~nSv~Eal~~GVP~i~~P~~~--DQ~~Na~-~v--~~~~g~G~~l~~~~~~~~~~~~l~~~i~~---ll~ 290 (335)
|+.- =| ..+.+||+++|.|.|+-...+ |-..+.. .. ... +.|+.+... +.+++.++|.+ +++
T Consensus 373 fv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~-~~G~l~~~~-----d~~~La~ai~~a~~l~~ 446 (485)
T PRK14099 373 LLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGV-ATGVQFSPV-----TADALAAALRKTAALFA 446 (485)
T ss_pred EEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCC-CceEEeCCC-----CHHHHHHHHHHHHHHhc
Confidence 7742 22 358899999997666544322 2211110 00 011 357777644 78999999987 555
Q ss_pred CC
Q 038830 291 GK 292 (335)
Q Consensus 291 ~~ 292 (335)
++
T Consensus 447 d~ 448 (485)
T PRK14099 447 DP 448 (485)
T ss_pred CH
Confidence 54
No 140
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=79.48 E-value=5.8 Score=42.56 Aligned_cols=81 Identities=14% Similarity=0.137 Sum_probs=51.4
Q ss_pred hhccccCcCeEEcc---CCcc-hHHHHHhcCCC---eeecCCCCChhhhHHHHHHHhc-cceeecCCCCCCcCHHHHHHH
Q 038830 213 GVLAHEATGCFLTH---CGWN-STLEALSLGVP---MVAMPLWTDQSTNSKYVMDVWK-MGLKVPADEKGIVRREAIAHC 284 (335)
Q Consensus 213 ~vL~h~~v~~fItH---gG~n-Sv~Eal~~GVP---~i~~P~~~DQ~~Na~~v~~~~g-~G~~l~~~~~~~~~~~~l~~~ 284 (335)
.+++.+++ |+.- -|.| +++|++++|.| +++++-++ ..+..+ | .|+.++.. +.++++++
T Consensus 371 aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~---G~~~~l----~~~allVnP~-----D~~~lA~A 436 (797)
T PLN03063 371 ALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFA---GAGQSL----GAGALLVNPW-----NITEVSSA 436 (797)
T ss_pred HHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCCc---Cchhhh----cCCeEEECCC-----CHHHHHHH
Confidence 78889999 7744 4776 67899999999 34433221 122211 3 47888754 78999999
Q ss_pred HHHHHcCCcHHHHHHHHHHHHHHH
Q 038830 285 ISEILEGKRDKEIKQNADKWRNFA 308 (335)
Q Consensus 285 i~~ll~~~~~~~~r~~a~~l~~~~ 308 (335)
|.++++.+.. +.+++.+++.+.+
T Consensus 437 I~~aL~m~~~-er~~r~~~~~~~v 459 (797)
T PLN03063 437 IKEALNMSDE-ERETRHRHNFQYV 459 (797)
T ss_pred HHHHHhCCHH-HHHHHHHHHHHhh
Confidence 9999974321 3334444444443
No 141
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=79.08 E-value=15 Score=35.68 Aligned_cols=136 Identities=18% Similarity=0.224 Sum_probs=83.4
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHH----HhhC-CCcEEEEEeCCCCCcCCccchhhcCC--ceEEE---eecchhhhc
Q 038830 146 NGSVVYVSFGSMATLKIEEMEELPCG----LKAS-DKYFLWVVRESEQSKLPENFSDETSQ--KGLVV---NWCPQLGVL 215 (335)
Q Consensus 146 ~~svvyvsfGS~~~~~~~~~~~l~~~----l~~~-~~~flw~~~~~~~~~l~~~~~~~~~~--~~~v~---~w~pq~~vL 215 (335)
.+..+.|++=-..... +.++++..+ ++.. +..++.-+... ..+.+-...++.+ |+.+. ++.+...++
T Consensus 203 ~~~~iLvT~HRreN~~-~~~~~i~~al~~i~~~~~~~~viyp~H~~--~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~ 279 (383)
T COG0381 203 DKKYILVTAHRRENVG-EPLEEICEALREIAEEYPDVIVIYPVHPR--PRVRELVLKRLKNVERVKLIDPLGYLDFHNLM 279 (383)
T ss_pred cCcEEEEEcchhhccc-ccHHHHHHHHHHHHHhCCCceEEEeCCCC--hhhhHHHHHHhCCCCcEEEeCCcchHHHHHHH
Confidence 3447777654443332 334444443 3333 45555544432 1111111133333 46665 467778999
Q ss_pred cccCcCeEEccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCCcHH
Q 038830 216 AHEATGCFLTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGKRDK 295 (335)
Q Consensus 216 ~h~~v~~fItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~ 295 (335)
.++-+ ++|-.|. -.-||-..|+|.+++=...+++. .++. |.-+.+. .+.+.|.+++.++++++
T Consensus 280 ~~a~~--iltDSGg-iqEEAp~lg~Pvl~lR~~TERPE----~v~a-gt~~lvg------~~~~~i~~~~~~ll~~~--- 342 (383)
T COG0381 280 KNAFL--ILTDSGG-IQEEAPSLGKPVLVLRDTTERPE----GVEA-GTNILVG------TDEENILDAATELLEDE--- 342 (383)
T ss_pred HhceE--EEecCCc-hhhhHHhcCCcEEeeccCCCCcc----ceec-CceEEeC------ccHHHHHHHHHHHhhCh---
Confidence 99988 9998875 35689999999999988888876 2344 5444443 46799999999999887
Q ss_pred HHHHHH
Q 038830 296 EIKQNA 301 (335)
Q Consensus 296 ~~r~~a 301 (335)
+..+|.
T Consensus 343 ~~~~~m 348 (383)
T COG0381 343 EFYERM 348 (383)
T ss_pred HHHHHH
Confidence 444443
No 142
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=78.77 E-value=4.7 Score=37.00 Aligned_cols=95 Identities=20% Similarity=0.218 Sum_probs=58.7
Q ss_pred CcEEEEEeCCcc---cCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhc-CCceE-EEee--cch-hhhcccc
Q 038830 147 GSVVYVSFGSMA---TLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDET-SQKGL-VVNW--CPQ-LGVLAHE 218 (335)
Q Consensus 147 ~svvyvsfGS~~---~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~-~~~~~-v~~w--~pq-~~vL~h~ 218 (335)
++.|.+..||.. ..+.+++.++++.|.+.++++++...+.+. ..-+.+.+.. ..+.. +.+- +.| ..+++++
T Consensus 121 ~~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~e~-~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~ 199 (279)
T cd03789 121 KPVVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPAER-ELAEEIAAALGGPRVVNLAGKTSLRELAALLARA 199 (279)
T ss_pred CCEEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechhhH-HHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhC
Confidence 456777777654 456788999999998778888765443321 1111222222 11211 1221 233 3889999
Q ss_pred CcCeEEccCCcchHHHHHhcCCCeeec
Q 038830 219 ATGCFLTHCGWNSTLEALSLGVPMVAM 245 (335)
Q Consensus 219 ~v~~fItHgG~nSv~Eal~~GVP~i~~ 245 (335)
++ ||+.-. +.++=|.+.|+|++++
T Consensus 200 ~l--~I~~Ds-g~~HlA~a~~~p~i~l 223 (279)
T cd03789 200 DL--VVTNDS-GPMHLAAALGTPTVAL 223 (279)
T ss_pred CE--EEeeCC-HHHHHHHHcCCCEEEE
Confidence 99 999864 5666677999999865
No 143
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=75.95 E-value=7.5 Score=39.89 Aligned_cols=81 Identities=12% Similarity=0.116 Sum_probs=46.4
Q ss_pred hhhhccccCcCeEEc-cCCc-chHHHHHhcCCCeeecCCCC-ChhhhHHHHHHHhccceeecCCCCC--CcCHHHHHHHH
Q 038830 211 QLGVLAHEATGCFLT-HCGW-NSTLEALSLGVPMVAMPLWT-DQSTNSKYVMDVWKMGLKVPADEKG--IVRREAIAHCI 285 (335)
Q Consensus 211 q~~vL~h~~v~~fIt-HgG~-nSv~Eal~~GVP~i~~P~~~-DQ~~Na~~v~~~~g~G~~l~~~~~~--~~~~~~l~~~i 285 (335)
..++++.+++..|=| +=|| .+++||+++|+|+|+-...+ ....+ ..+.+.-..|+.+...... .-+.++|.+++
T Consensus 468 y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~-E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m 546 (590)
T cd03793 468 YEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME-EHIEDPESYGIYIVDRRFKSPDESVQQLTQYM 546 (590)
T ss_pred hHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH-HHhccCCCceEEEecCCccchHHHHHHHHHHH
Confidence 346788888844433 3454 58999999999999876532 12221 1111110146666432110 12456778888
Q ss_pred HHHHcCC
Q 038830 286 SEILEGK 292 (335)
Q Consensus 286 ~~ll~~~ 292 (335)
.++++.+
T Consensus 547 ~~~~~~~ 553 (590)
T cd03793 547 YEFCQLS 553 (590)
T ss_pred HHHhCCc
Confidence 8887544
No 144
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=75.26 E-value=29 Score=36.79 Aligned_cols=108 Identities=16% Similarity=0.124 Sum_probs=60.5
Q ss_pred eecchh---hhccccCcCeEEcc---CCc-chHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHH
Q 038830 207 NWCPQL---GVLAHEATGCFLTH---CGW-NSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRRE 279 (335)
Q Consensus 207 ~w~pq~---~vL~h~~v~~fItH---gG~-nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~ 279 (335)
+++++. .+++.+++ |+.- -|. +.++|++++|+|-.+.|...+--.-+. +. .-|+.++.. +.+
T Consensus 348 ~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~---~l-~~~llv~P~-----d~~ 416 (726)
T PRK14501 348 RSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAA---EL-AEALLVNPN-----DIE 416 (726)
T ss_pred CCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhH---Hh-CcCeEECCC-----CHH
Confidence 566665 68888888 6653 354 578999999765222222211111111 22 237777754 789
Q ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhh
Q 038830 280 AIAHCISEILEGKRDKEIKQNADKWRNFAKEAVAKGGSSDKNIDDFVANLIS 331 (335)
Q Consensus 280 ~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~ggss~~~l~~~v~~~~~ 331 (335)
+++++|.+++..+.. +.+++.+++++.++ .-+...-.++|++.+.+
T Consensus 417 ~la~ai~~~l~~~~~-e~~~r~~~~~~~v~-----~~~~~~w~~~~l~~l~~ 462 (726)
T PRK14501 417 GIAAAIKRALEMPEE-EQRERMQAMQERLR-----RYDVHKWASDFLDELRE 462 (726)
T ss_pred HHHHHHHHHHcCCHH-HHHHHHHHHHHHHH-----hCCHHHHHHHHHHHHHH
Confidence 999999999975421 33333333333332 13444445555555543
No 145
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=73.76 E-value=33 Score=32.44 Aligned_cols=50 Identities=24% Similarity=0.310 Sum_probs=35.7
Q ss_pred chhhhccccCcCeEEccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHH
Q 038830 210 PQLGVLAHEATGCFLTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMD 260 (335)
Q Consensus 210 pq~~vL~h~~v~~fItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~ 260 (335)
|....|+.++. .|||=-..+.+.||++.|+|+.++|+..-...-.+++..
T Consensus 221 Py~~~La~ad~-i~VT~DSvSMvsEA~~tG~pV~v~~l~~~~~r~~r~~~~ 270 (311)
T PF06258_consen 221 PYLGFLAAADA-IVVTEDSVSMVSEAAATGKPVYVLPLPGRSGRFRRFHQS 270 (311)
T ss_pred cHHHHHHhCCE-EEEcCccHHHHHHHHHcCCCEEEecCCCcchHHHHHHHH
Confidence 55588888887 355555568899999999999999988622333344433
No 146
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=73.33 E-value=12 Score=35.34 Aligned_cols=104 Identities=16% Similarity=0.188 Sum_probs=64.1
Q ss_pred HHHhhcC-CCCcEEEEEeCCcc---cCCHHHHHHHHHHHhhCCCcEEEEEeCCCCC-cCCccchhhcCCceEEEe-----
Q 038830 138 MKWLNDR-ANGSVVYVSFGSMA---TLKIEEMEELPCGLKASDKYFLWVVRESEQS-KLPENFSDETSQKGLVVN----- 207 (335)
Q Consensus 138 ~~wLd~~-~~~svvyvsfGS~~---~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~-~l~~~~~~~~~~~~~v~~----- 207 (335)
..++... .+++.|.+.-|+.. ..+.+.+.++++.|...+.++++.-++.+.+ .+-+.+.+..+ +..++.
T Consensus 171 ~~~l~~~~~~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~-~~~~~~l~g~~ 249 (344)
T TIGR02201 171 RALLDEAGVGQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQ-TPRVTSLAGKL 249 (344)
T ss_pred HHHHHhcCCCCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCC-CCcccccCCCC
Confidence 3445432 24566777777654 3557889999999987788877654332111 11112222221 112222
Q ss_pred ecchh-hhccccCcCeEEccCCcchHHHHHhcCCCeeec
Q 038830 208 WCPQL-GVLAHEATGCFLTHCGWNSTLEALSLGVPMVAM 245 (335)
Q Consensus 208 w~pq~-~vL~h~~v~~fItHgG~nSv~Eal~~GVP~i~~ 245 (335)
-+.|. .+++++++ ||+. -.|-++=|.+.|+|.|++
T Consensus 250 sL~el~ali~~a~l--~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 250 TLPQLAALIDHARL--FIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred CHHHHHHHHHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 23444 89999999 9998 667888899999999965
No 147
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=72.88 E-value=15 Score=35.31 Aligned_cols=94 Identities=13% Similarity=0.116 Sum_probs=56.1
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCC--CcCCc-cchh-hcCCceEEE--ee-------------
Q 038830 148 SVVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQ--SKLPE-NFSD-ETSQKGLVV--NW------------- 208 (335)
Q Consensus 148 svvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~--~~l~~-~~~~-~~~~~~~v~--~w------------- 208 (335)
.+++.+.||.+...+. .++++.|++.++.++|+.+.... ..+|+ ++.- .++..++-. .|
T Consensus 3 ~i~~~~GGTGGHi~Pa--la~a~~l~~~g~~v~~vg~~~~~e~~l~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 80 (352)
T PRK12446 3 KIVFTGGGSAGHVTPN--LAIIPYLKEDNWDISYIGSHQGIEKTIIEKENIPYYSISSGKLRRYFDLKNIKDPFLVMKGV 80 (352)
T ss_pred eEEEEcCCcHHHHHHH--HHHHHHHHhCCCEEEEEECCCccccccCcccCCcEEEEeccCcCCCchHHHHHHHHHHHHHH
Confidence 4888888998875543 35777777789999998754321 12222 1110 011000000 01
Q ss_pred cchhhhcc--ccCcCeEEccCCcch---HHHHHhcCCCeeec
Q 038830 209 CPQLGVLA--HEATGCFLTHCGWNS---TLEALSLGVPMVAM 245 (335)
Q Consensus 209 ~pq~~vL~--h~~v~~fItHgG~nS---v~Eal~~GVP~i~~ 245 (335)
.--..++. .|++ +|+|||.-| ++-|...|+|.+..
T Consensus 81 ~~~~~i~~~~kPdv--vi~~Ggy~s~p~~~aa~~~~~p~~i~ 120 (352)
T PRK12446 81 MDAYVRIRKLKPDV--IFSKGGFVSVPVVIGGWLNRVPVLLH 120 (352)
T ss_pred HHHHHHHHhcCCCE--EEecCchhhHHHHHHHHHcCCCEEEE
Confidence 00113344 4666 999999997 89999999999873
No 148
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=70.80 E-value=12 Score=34.31 Aligned_cols=81 Identities=14% Similarity=0.144 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhh-C-CCcEEEEEeCCCCCcCCccchhhc---CCceEEEeecchhhhccccCcCeEEccCCcchHHHHHh
Q 038830 163 EEMEELPCGLKA-S-DKYFLWVVRESEQSKLPENFSDET---SQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTLEALS 237 (335)
Q Consensus 163 ~~~~~l~~~l~~-~-~~~flw~~~~~~~~~l~~~~~~~~---~~~~~v~~w~pq~~vL~h~~v~~fItHgG~nSv~Eal~ 237 (335)
..+.+++..+.+ . +..++.+..+.....-..++.+.. .....+..-++-.++|.+++. +||-.+. .-+||+.
T Consensus 140 ~~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~s~~--VvtinSt-vGlEAll 216 (269)
T PF05159_consen 140 ADFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPNLPNVVIIDDDVNLYELLEQSDA--VVTINST-VGLEALL 216 (269)
T ss_pred hHHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhcCCCeEEECCCCCHHHHHHhCCE--EEEECCH-HHHHHHH
Confidence 334444444433 2 566665555422111111222222 223333455677799999998 8887554 7789999
Q ss_pred cCCCeeecC
Q 038830 238 LGVPMVAMP 246 (335)
Q Consensus 238 ~GVP~i~~P 246 (335)
+|+|++++-
T Consensus 217 ~gkpVi~~G 225 (269)
T PF05159_consen 217 HGKPVIVFG 225 (269)
T ss_pred cCCceEEec
Confidence 999999853
No 149
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=70.60 E-value=1.3e+02 Score=30.53 Aligned_cols=109 Identities=13% Similarity=0.053 Sum_probs=69.3
Q ss_pred EEeecchh---hhccccCcCeEEc---cCCcchH-HHHHhcCC----CeeecCCCCChhhhHHHHHHHhccceeecCCCC
Q 038830 205 VVNWCPQL---GVLAHEATGCFLT---HCGWNST-LEALSLGV----PMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEK 273 (335)
Q Consensus 205 v~~w~pq~---~vL~h~~v~~fIt---HgG~nSv-~Eal~~GV----P~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~ 273 (335)
+.+.+|.. .+++.+++ ++. .-|+|-+ .|.++++. |+|.--+.+ |. ++. .-|+.+++.
T Consensus 366 ~~~~v~~~el~alYr~ADV--~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaG-----aa--~~l-~~AllVNP~-- 433 (487)
T TIGR02398 366 FTRSLPYEEVSAWFAMADV--MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAG-----AA--VEL-KGALLTNPY-- 433 (487)
T ss_pred EcCCCCHHHHHHHHHhCCE--EEECccccccCcchhhHHhhhcCCCCCEEEecccc-----ch--hhc-CCCEEECCC--
Confidence 33566665 57778888 554 3488854 59999987 555443321 11 223 447888754
Q ss_pred CCcCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhhccC
Q 038830 274 GIVRREAIAHCISEILEGKRDKEIKQNADKWRNFAKEAVAKGGSSDKNIDDFVANLISSKS 334 (335)
Q Consensus 274 ~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~ggss~~~l~~~v~~~~~~~~ 334 (335)
+.++++++|.+.|..+.. +-++|.+++.+.++. -++..=.+.|++.+.....
T Consensus 434 ---d~~~~A~ai~~AL~m~~~-Er~~R~~~l~~~v~~-----~d~~~W~~~fl~~l~~~~~ 485 (487)
T TIGR02398 434 ---DPVRMDETIYVALAMPKA-EQQARMREMFDAVNY-----YDVQRWADEFLAAVSPQAQ 485 (487)
T ss_pred ---CHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHhh-----CCHHHHHHHHHHHhhhccc
Confidence 799999999999987632 445566666665543 3444456678887766543
No 150
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=67.95 E-value=21 Score=34.04 Aligned_cols=97 Identities=9% Similarity=0.119 Sum_probs=59.7
Q ss_pred CCcEEEEEeCCcc---cCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCc-CCccchhhcC-Cce-EEEe--ecchh-hhcc
Q 038830 146 NGSVVYVSFGSMA---TLKIEEMEELPCGLKASDKYFLWVVRESEQSK-LPENFSDETS-QKG-LVVN--WCPQL-GVLA 216 (335)
Q Consensus 146 ~~svvyvsfGS~~---~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~-l~~~~~~~~~-~~~-~v~~--w~pq~-~vL~ 216 (335)
+++.|.+.-|+.. ..+.+.+.++++.|.+.+.++++.-++++.+. .-+.+.+... .+. -+.+ -+.|. .+++
T Consensus 182 ~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~ 261 (352)
T PRK10422 182 TQNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALID 261 (352)
T ss_pred CCCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHH
Confidence 3467777777754 35678899999999877888776544432111 1112221111 111 1222 23444 8999
Q ss_pred ccCcCeEEccCCcchHHHHHhcCCCeeec
Q 038830 217 HEATGCFLTHCGWNSTLEALSLGVPMVAM 245 (335)
Q Consensus 217 h~~v~~fItHgG~nSv~Eal~~GVP~i~~ 245 (335)
++++ ||+.= .|-++=|.+.|+|.|++
T Consensus 262 ~a~l--~v~nD-SGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 262 HAQL--FIGVD-SAPAHIAAAVNTPLICL 287 (352)
T ss_pred hCCE--EEecC-CHHHHHHHHcCCCEEEE
Confidence 9999 99874 45677788999999964
No 151
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=65.70 E-value=23 Score=33.31 Aligned_cols=96 Identities=13% Similarity=0.076 Sum_probs=59.1
Q ss_pred CCcEEEEEeCCc-c---cCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceE-EEe--ecchh-hhccc
Q 038830 146 NGSVVYVSFGSM-A---TLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGL-VVN--WCPQL-GVLAH 217 (335)
Q Consensus 146 ~~svvyvsfGS~-~---~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~-v~~--w~pq~-~vL~h 217 (335)
+++.|.+.-|+. . ..+.+.+.++++.|.+.+.+++.. +..+....-+.+.+..+.+.. +.+ -+.+. .++++
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~-G~~~e~~~~~~i~~~~~~~~~~l~g~~sL~el~ali~~ 251 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLF-GSAKDHPAGNEIEALLPGELRNLAGETSLDEAVDLIAL 251 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEE-EChhhHHHHHHHHHhCCcccccCCCCCCHHHHHHHHHh
Confidence 467788887764 2 356788999999987777776644 433221111222222222211 122 23344 88999
Q ss_pred cCcCeEEccCCcchHHHHHhcCCCeeec
Q 038830 218 EATGCFLTHCGWNSTLEALSLGVPMVAM 245 (335)
Q Consensus 218 ~~v~~fItHgG~nSv~Eal~~GVP~i~~ 245 (335)
+++ ||+.- .|-++=|.+.|+|.|++
T Consensus 252 a~l--~I~~D-SGp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 252 AKA--VVTND-SGLMHVAAALNRPLVAL 276 (334)
T ss_pred CCE--EEeeC-CHHHHHHHHcCCCEEEE
Confidence 999 99874 45677788999999964
No 152
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=63.25 E-value=8.6 Score=34.36 Aligned_cols=98 Identities=15% Similarity=0.164 Sum_probs=52.0
Q ss_pred CCCcEEEEEeCCcc---cCCHHHHHHHHHHHhhCCCcEEEEEeCCCC-CcCCccchhhcCCceE-EEe--ecchh-hhcc
Q 038830 145 ANGSVVYVSFGSMA---TLKIEEMEELPCGLKASDKYFLWVVRESEQ-SKLPENFSDETSQKGL-VVN--WCPQL-GVLA 216 (335)
Q Consensus 145 ~~~svvyvsfGS~~---~~~~~~~~~l~~~l~~~~~~flw~~~~~~~-~~l~~~~~~~~~~~~~-v~~--w~pq~-~vL~ 216 (335)
.+++.|.+..|+.. ..+.+.+.++++.|.+.+++++...++.+. ...-+.+.+..+.+.. +.+ -+.|. .+++
T Consensus 103 ~~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali~ 182 (247)
T PF01075_consen 103 KDKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALIS 182 (247)
T ss_dssp TTSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHHH
T ss_pred ccCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHHh
Confidence 34566777777654 456788999999998877666544333220 1111111111111222 222 23333 7889
Q ss_pred ccCcCeEEccCCcchHHHHHhcCCCeeec
Q 038830 217 HEATGCFLTHCGWNSTLEALSLGVPMVAM 245 (335)
Q Consensus 217 h~~v~~fItHgG~nSv~Eal~~GVP~i~~ 245 (335)
++++ ||+.- .+.++=|.+.|+|+|++
T Consensus 183 ~a~~--~I~~D-tg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 183 RADL--VIGND-TGPMHLAAALGTPTVAL 208 (247)
T ss_dssp TSSE--EEEES-SHHHHHHHHTT--EEEE
T ss_pred cCCE--EEecC-ChHHHHHHHHhCCEEEE
Confidence 9998 88875 45677788999999987
No 153
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=61.16 E-value=40 Score=31.97 Aligned_cols=83 Identities=18% Similarity=0.205 Sum_probs=51.8
Q ss_pred CceEEE-eecchhhhccccCcCeEEccCCcchHHH-HHhcCCCeeecCCCCChhh--hHHHHHHHhccceeecCCCCCCc
Q 038830 201 QKGLVV-NWCPQLGVLAHEATGCFLTHCGWNSTLE-ALSLGVPMVAMPLWTDQST--NSKYVMDVWKMGLKVPADEKGIV 276 (335)
Q Consensus 201 ~~~~v~-~w~pq~~vL~h~~v~~fItHgG~nSv~E-al~~GVP~i~~P~~~DQ~~--Na~~v~~~~g~G~~l~~~~~~~~ 276 (335)
+|..+. .|....++|.|+++ .|--.| |..| ++--|+|+|.+|-.+-|+. -|.+-...+|+.+.+-..
T Consensus 294 dnc~l~lsqqsfadiLH~ada--algmAG--TAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~----- 364 (412)
T COG4370 294 DNCSLWLSQQSFADILHAADA--ALGMAG--TATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRP----- 364 (412)
T ss_pred CceEEEEeHHHHHHHHHHHHH--HHHhcc--chHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCC-----
Confidence 344443 55555578888777 444443 3333 5668999999999999976 455555556777766432
Q ss_pred CHHHHHHHHHHHHcCC
Q 038830 277 RREAIAHCISEILEGK 292 (335)
Q Consensus 277 ~~~~l~~~i~~ll~~~ 292 (335)
....-..+..+++.|+
T Consensus 365 ~aq~a~~~~q~ll~dp 380 (412)
T COG4370 365 EAQAAAQAVQELLGDP 380 (412)
T ss_pred chhhHHHHHHHHhcCh
Confidence 2222233344588887
No 154
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=60.49 E-value=15 Score=34.46 Aligned_cols=135 Identities=12% Similarity=0.037 Sum_probs=73.6
Q ss_pred CcEE-EEEeCCcc--cCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEe--ecchh-hhccccCc
Q 038830 147 GSVV-YVSFGSMA--TLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVN--WCPQL-GVLAHEAT 220 (335)
Q Consensus 147 ~svv-yvsfGS~~--~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~--w~pq~-~vL~h~~v 220 (335)
++.| ++..||.. ..+.+.+.++++.|.+.+.+++...+.......-+.+.+.. .+..+.+ .+.|. .+++++++
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~e~~~~~~i~~~~-~~~~l~g~~sL~elaali~~a~l 256 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEHEEQRAKRLAEGF-PYVEVLPKLSLEQVARVLAGAKA 256 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHccC-CcceecCCCCHHHHHHHHHhCCE
Confidence 3444 44445543 36678899999999777777665434321111111221111 1222322 34444 89999999
Q ss_pred CeEEccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhcc-ceeec--CCCCCCcCHHHHHHHHHHHHc
Q 038830 221 GCFLTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKM-GLKVP--ADEKGIVRREAIAHCISEILE 290 (335)
Q Consensus 221 ~~fItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~-G~~l~--~~~~~~~~~~~l~~~i~~ll~ 290 (335)
||+-. .|.++=|.+.|+|+|++=-..+.....-+ +- ...+. ......++.+++.+++++++.
T Consensus 257 --~I~nD-SGp~HlA~A~g~p~valfGpt~p~~~~p~-----~~~~~~~~~~~~cm~~I~~e~V~~~~~~~l~ 321 (322)
T PRK10964 257 --VVSVD-TGLSHLTAALDRPNITLYGPTDPGLIGGY-----GKNQHACRSPGKSMADLSAETVFQKLETLIS 321 (322)
T ss_pred --EEecC-CcHHHHHHHhCCCEEEEECCCCcccccCC-----CCCceeecCCCcccccCCHHHHHHHHHHHhh
Confidence 99975 45677788999999965222221111100 00 00111 111126889999999887763
No 155
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=59.48 E-value=34 Score=32.50 Aligned_cols=96 Identities=13% Similarity=0.050 Sum_probs=58.6
Q ss_pred CCcEEEEEeCCc-c---cCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCC----ce-EEEe--ecchh-h
Q 038830 146 NGSVVYVSFGSM-A---TLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQ----KG-LVVN--WCPQL-G 213 (335)
Q Consensus 146 ~~svvyvsfGS~-~---~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~----~~-~v~~--w~pq~-~ 213 (335)
+++.|.+.-|+. . ..+.+.+.++++.|.+.+.+++.. +.......-+.+.+..+. +. -+.+ -+.+. .
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~-Gg~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sL~el~a 257 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLF-GSAKDHEAGNEILAALNTEQQAWCRNLAGETQLEQAVI 257 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEE-eCHHhHHHHHHHHHhcccccccceeeccCCCCHHHHHH
Confidence 566788888774 2 356788999999987667776654 332221111222222211 11 1122 23343 7
Q ss_pred hccccCcCeEEccCCcchHHHHHhcCCCeeec
Q 038830 214 VLAHEATGCFLTHCGWNSTLEALSLGVPMVAM 245 (335)
Q Consensus 214 vL~h~~v~~fItHgG~nSv~Eal~~GVP~i~~ 245 (335)
+++++++ ||+- -.|-++=|.+.|+|+|++
T Consensus 258 li~~a~l--~I~n-DTGp~HlAaA~g~P~val 286 (348)
T PRK10916 258 LIAACKA--IVTN-DSGLMHVAAALNRPLVAL 286 (348)
T ss_pred HHHhCCE--EEec-CChHHHHHHHhCCCEEEE
Confidence 9999999 9986 456677788999999854
No 156
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=56.97 E-value=40 Score=31.96 Aligned_cols=95 Identities=16% Similarity=0.192 Sum_probs=59.7
Q ss_pred CcEEEEEeC-Ccc---cCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEe--ecchh-hhccccC
Q 038830 147 GSVVYVSFG-SMA---TLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVN--WCPQL-GVLAHEA 219 (335)
Q Consensus 147 ~svvyvsfG-S~~---~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~--w~pq~-~vL~h~~ 219 (335)
++.|.++-| |.+ ..+.+++.++++.|.+.+.++++. ++.+..+.-+.+.+.......+.+ -+.|. .++.+++
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~-g~~~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a~ 253 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLF-GGPDEEERAEEIAKGLPNAVILAGKTSLEELAALIAGAD 253 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEe-cChHHHHHHHHHHHhcCCccccCCCCCHHHHHHHHhcCC
Confidence 578888888 553 567899999999999988665543 333222222222222222221333 33444 7788888
Q ss_pred cCeEEccCCcchHHHHHhcCCCeeec
Q 038830 220 TGCFLTHCGWNSTLEALSLGVPMVAM 245 (335)
Q Consensus 220 v~~fItHgG~nSv~Eal~~GVP~i~~ 245 (335)
+ ||+- -.|-++=|.+.|+|.|++
T Consensus 254 l--~I~~-DSg~~HlAaA~~~P~I~i 276 (334)
T COG0859 254 L--VIGN-DSGPMHLAAALGTPTIAL 276 (334)
T ss_pred E--EEcc-CChHHHHHHHcCCCEEEE
Confidence 8 8875 345667788899999965
No 157
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=52.53 E-value=59 Score=27.34 Aligned_cols=138 Identities=15% Similarity=0.176 Sum_probs=65.3
Q ss_pred EEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchhhhccccCcCeEEccCCc
Q 038830 150 VYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGW 229 (335)
Q Consensus 150 vyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~v~~fItHgG~ 229 (335)
|-|-+||.. +....++....|+..|.++-..+-+. ...|+.+.+ ++...+- .++++ ||.=.|.
T Consensus 3 V~Ii~gs~S--D~~~~~~a~~~L~~~gi~~~~~V~sa--HR~p~~l~~----------~~~~~~~-~~~~v--iIa~AG~ 65 (150)
T PF00731_consen 3 VAIIMGSTS--DLPIAEEAAKTLEEFGIPYEVRVASA--HRTPERLLE----------FVKEYEA-RGADV--IIAVAGM 65 (150)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTT-EEEEEE--T--TTSHHHHHH----------HHHHTTT-TTESE--EEEEEES
T ss_pred EEEEeCCHH--HHHHHHHHHHHHHHcCCCEEEEEEec--cCCHHHHHH----------HHHHhcc-CCCEE--EEEECCC
Confidence 555567655 35677888888888886664433322 222332211 1111100 22344 8887776
Q ss_pred chHHHHHh---cCCCeeecCCCCChhhhHHH----HHHHhccceeecCCCCCCcCHHHHHHHHHHHH--cCCcHHHHHHH
Q 038830 230 NSTLEALS---LGVPMVAMPLWTDQSTNSKY----VMDVWKMGLKVPADEKGIVRREAIAHCISEIL--EGKRDKEIKQN 300 (335)
Q Consensus 230 nSv~Eal~---~GVP~i~~P~~~DQ~~Na~~----v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll--~~~~~~~~r~~ 300 (335)
..-+-++. .-.|+|.+|....+.....- +.---|+++..-.- . +...-.-...+++ .++ +++++
T Consensus 66 ~a~Lpgvva~~t~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i---~-~~~nAA~~A~~ILa~~d~---~l~~k 138 (150)
T PF00731_consen 66 SAALPGVVASLTTLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGI---N-NGFNAALLAARILALKDP---ELREK 138 (150)
T ss_dssp S--HHHHHHHHSSS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SS---T-HHHHHHHHHHHHHHTT-H---HHHHH
T ss_pred cccchhhheeccCCCEEEeecCcccccCcccHHHHHhccCCCCceEEEc---c-CchHHHHHHHHHHhcCCH---HHHHH
Confidence 54433332 36899999998775543332 21111444433211 0 1222222233444 344 78888
Q ss_pred HHHHHHHHHHH
Q 038830 301 ADKWRNFAKEA 311 (335)
Q Consensus 301 a~~l~~~~~~a 311 (335)
.++.+++.++.
T Consensus 139 l~~~~~~~~~~ 149 (150)
T PF00731_consen 139 LRAYREKMKEK 149 (150)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHcc
Confidence 88888877653
No 158
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=52.35 E-value=1.2e+02 Score=25.59 Aligned_cols=27 Identities=26% Similarity=0.321 Sum_probs=21.9
Q ss_pred cCeEEccCCc------chHHHHHhcCCCeeecC
Q 038830 220 TGCFLTHCGW------NSTLEALSLGVPMVAMP 246 (335)
Q Consensus 220 v~~fItHgG~------nSv~Eal~~GVP~i~~P 246 (335)
.++.++|+|- +.+.+|...++|||++.
T Consensus 64 ~~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~ 96 (164)
T cd07039 64 LGVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIA 96 (164)
T ss_pred CEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 4448888884 47889999999999986
No 159
>PLN02470 acetolactate synthase
Probab=51.43 E-value=19 Score=37.02 Aligned_cols=92 Identities=16% Similarity=0.117 Sum_probs=50.2
Q ss_pred EeCCcccCCH--HHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEe--------ecchhhhccccCcCe
Q 038830 153 SFGSMATLKI--EEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVN--------WCPQLGVLAHEATGC 222 (335)
Q Consensus 153 sfGS~~~~~~--~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~--------w~pq~~vL~h~~v~~ 222 (335)
+|||....+. .--+.+++.|++.|.+.++-+.+.....+-+.+.+ .++.+.+. ++-.-.-..+..+++
T Consensus 2 ~~~~~~~~~~~~~~a~~l~~~L~~~GV~~vFg~pG~~~~~l~dal~~--~~~i~~i~~rhE~~A~~~Adgyar~tg~~gv 79 (585)
T PLN02470 2 TFQSRFAPDEPRKGADILVEALEREGVDTVFAYPGGASMEIHQALTR--SNCIRNVLCRHEQGEVFAAEGYAKASGKVGV 79 (585)
T ss_pred CcccCCCCCccccHHHHHHHHHHHcCCCEEEEcCCcccHHHHHHHhc--cCCceEEEeccHHHHHHHHHHHHHHhCCCEE
Confidence 3666554332 22456777777777777777655432222222210 01122221 111111122335666
Q ss_pred EEccCCc------chHHHHHhcCCCeeecC
Q 038830 223 FLTHCGW------NSTLEALSLGVPMVAMP 246 (335)
Q Consensus 223 fItHgG~------nSv~Eal~~GVP~i~~P 246 (335)
+++|.|- +.+.+|.+.++|||++.
T Consensus 80 ~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 80 CIATSGPGATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred EEECCCccHHHHHHHHHHHHhcCCcEEEEe
Confidence 9999884 47889999999999884
No 160
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=50.06 E-value=46 Score=29.23 Aligned_cols=147 Identities=14% Similarity=0.028 Sum_probs=72.9
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcC-CceEEEeecchhhhccccCcCeEE
Q 038830 146 NGSVVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETS-QKGLVVNWCPQLGVLAHEATGCFL 224 (335)
Q Consensus 146 ~~svvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~-~~~~v~~w~pq~~vL~h~~v~~fI 224 (335)
.+.|+.|..|.++. ..+..|.+.|..+.++ .+. +.+.+.+... ++........+..-+..+++ +|
T Consensus 10 ~k~vLVIGgG~va~-------~ka~~Ll~~ga~V~VI-s~~----~~~~l~~l~~~~~i~~~~~~~~~~~l~~adl--Vi 75 (202)
T PRK06718 10 NKRVVIVGGGKVAG-------RRAITLLKYGAHIVVI-SPE----LTENLVKLVEEGKIRWKQKEFEPSDIVDAFL--VI 75 (202)
T ss_pred CCEEEEECCCHHHH-------HHHHHHHHCCCeEEEE-cCC----CCHHHHHHHhCCCEEEEecCCChhhcCCceE--EE
Confidence 45678887776663 3455566667666544 322 2222222111 22333333334455677777 77
Q ss_pred ccCCcchHHHHHh----cCCCeeecCCCCChhhhHHHH-----HHHhccceeecCCCCCCcCHHHHHHHHHHHHcCCcHH
Q 038830 225 THCGWNSTLEALS----LGVPMVAMPLWTDQSTNSKYV-----MDVWKMGLKVPADEKGIVRREAIAHCISEILEGKRDK 295 (335)
Q Consensus 225 tHgG~nSv~Eal~----~GVP~i~~P~~~DQ~~Na~~v-----~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~ 295 (335)
+--+--.+.+.++ .++++-+ .|.+..+.++ ... ++-+.+..+...-.-+..|++.|.+++. ++..
T Consensus 76 aaT~d~elN~~i~~~a~~~~lvn~----~d~~~~~~f~~Pa~~~~g-~l~iaIsT~G~sP~la~~lr~~ie~~~~-~~~~ 149 (202)
T PRK06718 76 AATNDPRVNEQVKEDLPENALFNV----ITDAESGNVVFPSALHRG-KLTISVSTDGASPKLAKKIRDELEALYD-ESYE 149 (202)
T ss_pred EcCCCHHHHHHHHHHHHhCCcEEE----CCCCccCeEEEeeEEEcC-CeEEEEECCCCChHHHHHHHHHHHHHcc-hhHH
Confidence 7777666666554 3443322 3444433322 222 2233333221112223456666666663 2234
Q ss_pred HHHHHHHHHHHHHHHHH
Q 038830 296 EIKQNADKWRNFAKEAV 312 (335)
Q Consensus 296 ~~r~~a~~l~~~~~~a~ 312 (335)
.+-+.+.++++.+++.+
T Consensus 150 ~~~~~~~~~R~~~k~~~ 166 (202)
T PRK06718 150 SYIDFLYECRQKIKELQ 166 (202)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 67777778888777643
No 161
>PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3A1F_A.
Probab=49.80 E-value=13 Score=30.57 Aligned_cols=39 Identities=28% Similarity=0.359 Sum_probs=29.3
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHh-----hCCCcEEEEEeCC
Q 038830 148 SVVYVSFGSMATLKIEEMEELPCGLK-----ASDKYFLWVVRES 186 (335)
Q Consensus 148 svvyvsfGS~~~~~~~~~~~l~~~l~-----~~~~~flw~~~~~ 186 (335)
.||+|+.|+........+.+++.... .....|+|++|..
T Consensus 3 ~vvlvAGG~GIt~~l~~l~~l~~~~~~~~~~~~~i~lvW~vR~~ 46 (156)
T PF08030_consen 3 NVVLVAGGSGITPILPILRDLLQRQNRGSSRTRRIKLVWVVRDA 46 (156)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHHHHTT-----EEEEEEEES-T
T ss_pred EEEEEecCcCHHHHHHHHHHHHHhhccccccccceEEEEeeCch
Confidence 58999999998776777777777776 2346899999975
No 162
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=49.77 E-value=13 Score=31.85 Aligned_cols=105 Identities=18% Similarity=0.257 Sum_probs=64.3
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchhhhccccCcCeEEc
Q 038830 146 NGSVVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLT 225 (335)
Q Consensus 146 ~~svvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~v~~fIt 225 (335)
.+.|..+.+|.++. ++++.+...|.+++..-+...... .+ .. ..+.+.+-.++|+.+++ ++.
T Consensus 36 g~tvgIiG~G~IG~-------~vA~~l~~fG~~V~~~d~~~~~~~---~~----~~--~~~~~~~l~ell~~aDi--v~~ 97 (178)
T PF02826_consen 36 GKTVGIIGYGRIGR-------AVARRLKAFGMRVIGYDRSPKPEE---GA----DE--FGVEYVSLDELLAQADI--VSL 97 (178)
T ss_dssp TSEEEEESTSHHHH-------HHHHHHHHTT-EEEEEESSCHHHH---HH----HH--TTEEESSHHHHHHH-SE--EEE
T ss_pred CCEEEEEEEcCCcC-------eEeeeeecCCceeEEecccCChhh---hc----cc--ccceeeehhhhcchhhh--hhh
Confidence 45688889998884 566667777888775544321100 01 00 11256677799999999 888
Q ss_pred cCCcchHHHHHhcCCCeeecCCC--CChhhhHHHHHHHhccc-eeecCCCCCCcCHHHHHHHHHH
Q 038830 226 HCGWNSTLEALSLGVPMVAMPLW--TDQSTNSKYVMDVWKMG-LKVPADEKGIVRREAIAHCISE 287 (335)
Q Consensus 226 HgG~nSv~Eal~~GVP~i~~P~~--~DQ~~Na~~v~~~~g~G-~~l~~~~~~~~~~~~l~~~i~~ 287 (335)
|| |.. ..+..|+..+... +=| +.++....+.++.+.+.+++++
T Consensus 98 ~~------------------plt~~T~~li~~~~l~~m-k~ga~lvN~aRG~~vde~aL~~aL~~ 143 (178)
T PF02826_consen 98 HL------------------PLTPETRGLINAEFLAKM-KPGAVLVNVARGELVDEDALLDALES 143 (178)
T ss_dssp -S------------------SSSTTTTTSBSHHHHHTS-TTTEEEEESSSGGGB-HHHHHHHHHT
T ss_pred hh------------------ccccccceeeeeeeeecc-ccceEEEeccchhhhhhhHHHHHHhh
Confidence 87 443 3567899998887 645 5555443346788888777753
No 163
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=48.89 E-value=65 Score=26.41 Aligned_cols=38 Identities=18% Similarity=0.279 Sum_probs=30.6
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEe
Q 038830 146 NGSVVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVR 184 (335)
Q Consensus 146 ~~svvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~ 184 (335)
...+|.+++|+......++++++++.+. .+.+++++..
T Consensus 50 ~~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~~ 87 (150)
T cd01840 50 LRKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVNP 87 (150)
T ss_pred CCCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEEC
Confidence 4569999999999888889999999884 4677777653
No 164
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=48.77 E-value=3e+02 Score=27.82 Aligned_cols=164 Identities=17% Similarity=0.180 Sum_probs=90.6
Q ss_pred cEEEEEeCCccc--CCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccc---hhhcCCceEEEeecchh---hhccccC
Q 038830 148 SVVYVSFGSMAT--LKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENF---SDETSQKGLVVNWCPQL---GVLAHEA 219 (335)
Q Consensus 148 svvyvsfGS~~~--~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~---~~~~~~~~~v~~w~pq~---~vL~h~~ 219 (335)
+.-|+++-|... ...+.+.+.+..+-+.+.+++ +++.+ ...+...+ .++.+++..+.-|.+.. .+++-++
T Consensus 293 ~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~v-ilG~g-d~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~agaD 370 (487)
T COG0297 293 PGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLV-LLGTG-DPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGAD 370 (487)
T ss_pred CCcEEEEeeccccccchhHHHHHHHHHHHhCceEE-EEecC-cHHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhcCC
Confidence 445555555432 223445566666655665554 34443 22232222 24455666666665544 6677777
Q ss_pred cCeEEc-----cCCcchHHHHHhcCCCeeecCCCC--ChhhhHHH--HHHHhccceeecCCCCCCcCHHHHHHHHHHHHc
Q 038830 220 TGCFLT-----HCGWNSTLEALSLGVPMVAMPLWT--DQSTNSKY--VMDVWKMGLKVPADEKGIVRREAIAHCISEILE 290 (335)
Q Consensus 220 v~~fIt-----HgG~nSv~Eal~~GVP~i~~P~~~--DQ~~Na~~--v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~ 290 (335)
+ |+- -||. |=++|+.+|.+-|+.|..+ |=...... .... |.|+.+.. .+++++..++++.+.
T Consensus 371 ~--~lmPSrfEPcGL-~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~-gtGf~f~~-----~~~~~l~~al~rA~~ 441 (487)
T COG0297 371 V--ILMPSRFEPCGL-TQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGV-GTGFLFLQ-----TNPDHLANALRRALV 441 (487)
T ss_pred E--EEeCCcCcCCcH-HHHHHHHcCCcceEcccCCccceecCccchhccCc-eeEEEEec-----CCHHHHHHHHHHHHH
Confidence 6 654 4776 4568999999888877642 22221111 3455 88888864 389999999987763
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 038830 291 GKRDKEIKQNADKWRNFAKEAVAKGGSSDKNIDDFVA 327 (335)
Q Consensus 291 ~~~~~~~r~~a~~l~~~~~~a~~~ggss~~~l~~~v~ 327 (335)
-|+.....++...+.++.-.-|-.....++++
T Consensus 442 -----~y~~~~~~w~~~~~~~m~~d~sw~~sa~~y~~ 473 (487)
T COG0297 442 -----LYRAPPLLWRKVQPNAMGADFSWDLSAKEYVE 473 (487)
T ss_pred -----HhhCCHHHHHHHHHhhcccccCchhHHHHHHH
Confidence 23333333555555555433333344444444
No 165
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=48.16 E-value=1e+02 Score=25.22 Aligned_cols=28 Identities=18% Similarity=0.290 Sum_probs=21.1
Q ss_pred cCeEEccCC------cchHHHHHhcCCCeeecCC
Q 038830 220 TGCFLTHCG------WNSTLEALSLGVPMVAMPL 247 (335)
Q Consensus 220 v~~fItHgG------~nSv~Eal~~GVP~i~~P~ 247 (335)
.+++++|+| .+.+.+|...++|+|.+.-
T Consensus 60 ~~v~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~~ 93 (155)
T cd07035 60 PGVVLVTSGPGLTNAVTGLANAYLDSIPLLVITG 93 (155)
T ss_pred CEEEEEcCCCcHHHHHHHHHHHHhhCCCEEEEeC
Confidence 334888866 4578888999999998853
No 166
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=43.94 E-value=1.2e+02 Score=26.65 Aligned_cols=149 Identities=14% Similarity=0.114 Sum_probs=69.8
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhc-CCceEEEeecchhhhccccCcCeEE
Q 038830 146 NGSVVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDET-SQKGLVVNWCPQLGVLAHEATGCFL 224 (335)
Q Consensus 146 ~~svvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~-~~~~~v~~w~pq~~vL~h~~v~~fI 224 (335)
.+.|+.|..|..+. .-+..|.+.|..+..+- +. +.+.+.+.. .++...+.-..+...|..+++ +|
T Consensus 9 gk~vlVvGgG~va~-------rk~~~Ll~~ga~VtVvs-p~----~~~~l~~l~~~~~i~~~~~~~~~~dl~~~~l--Vi 74 (205)
T TIGR01470 9 GRAVLVVGGGDVAL-------RKARLLLKAGAQLRVIA-EE----LESELTLLAEQGGITWLARCFDADILEGAFL--VI 74 (205)
T ss_pred CCeEEEECcCHHHH-------HHHHHHHHCCCEEEEEc-CC----CCHHHHHHHHcCCEEEEeCCCCHHHhCCcEE--EE
Confidence 34577776666552 33455556777765442 22 112221111 123333321123345666666 77
Q ss_pred ccCCcchHHHH-----HhcCCCeeec--CCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCCcHHHH
Q 038830 225 THCGWNSTLEA-----LSLGVPMVAM--PLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGKRDKEI 297 (335)
Q Consensus 225 tHgG~nSv~Ea-----l~~GVP~i~~--P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~ 297 (335)
..-|...+.+. -..|+|+-++ |-.+| +..-..+... ++-+.+..+...-.-+..|++.|.+++.... ..+
T Consensus 75 ~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~-f~~pa~~~~g-~l~iaisT~G~sP~la~~lr~~ie~~l~~~~-~~~ 151 (205)
T TIGR01470 75 AATDDEELNRRVAHAARARGVPVNVVDDPELCS-FIFPSIVDRS-PVVVAISSGGAAPVLARLLRERIETLLPPSL-GDL 151 (205)
T ss_pred ECCCCHHHHHHHHHHHHHcCCEEEECCCcccCe-EEEeeEEEcC-CEEEEEECCCCCcHHHHHHHHHHHHhcchhH-HHH
Confidence 77776544443 3467777332 22222 1111122222 2333333221112234557777777775332 356
Q ss_pred HHHHHHHHHHHHHH
Q 038830 298 KQNADKWRNFAKEA 311 (335)
Q Consensus 298 r~~a~~l~~~~~~a 311 (335)
-+.+.++++.+++.
T Consensus 152 ~~~~~~~R~~~k~~ 165 (205)
T TIGR01470 152 ATLAATWRDAVKKR 165 (205)
T ss_pred HHHHHHHHHHHHhh
Confidence 67777777777654
No 167
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=43.85 E-value=12 Score=37.57 Aligned_cols=59 Identities=19% Similarity=0.258 Sum_probs=36.6
Q ss_pred hHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCCcHHHHHHH
Q 038830 231 STLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGKRDKEIKQN 300 (335)
Q Consensus 231 Sv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~ 300 (335)
++.||+++|.|+++.=- --=+..+++. -.|..++.+ .-....+++++.++..++ +++.+
T Consensus 381 v~IEAMa~glPvvAt~~----GGP~EiV~~~-~tG~l~dp~---~e~~~~~a~~~~kl~~~p---~l~~~ 439 (495)
T KOG0853|consen 381 VPIEAMACGLPVVATNN----GGPAEIVVHG-VTGLLIDPG---QEAVAELADALLKLRRDP---ELWAR 439 (495)
T ss_pred eeHHHHhcCCCEEEecC----CCceEEEEcC-CcceeeCCc---hHHHHHHHHHHHHHhcCH---HHHHH
Confidence 78999999999998532 1112223333 345555432 222347999999999888 45444
No 168
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=43.36 E-value=3.2e+02 Score=26.58 Aligned_cols=144 Identities=19% Similarity=0.226 Sum_probs=81.2
Q ss_pred CCCcEEEEEeCCcccCCHHHHHHHHHHHhh---------CCC-cEEEEEeCCCCCcCCccchhhcC----CceEEE-eec
Q 038830 145 ANGSVVYVSFGSMATLKIEEMEELPCGLKA---------SDK-YFLWVVRESEQSKLPENFSDETS----QKGLVV-NWC 209 (335)
Q Consensus 145 ~~~svvyvsfGS~~~~~~~~~~~l~~~l~~---------~~~-~flw~~~~~~~~~l~~~~~~~~~----~~~~v~-~w~ 209 (335)
++++.++||--| ..+.+.+.-++++|.. .+. ..+.++.+. ..+.+.+.+.+. .++.+. .|.
T Consensus 252 ~~~pallvsSTs--wTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGK--GPlkE~Y~~~I~~~~~~~v~~~tpWL 327 (444)
T KOG2941|consen 252 PERPALLVSSTS--WTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGK--GPLKEKYSQEIHEKNLQHVQVCTPWL 327 (444)
T ss_pred cCCCeEEEecCC--CCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCC--CchhHHHHHHHHHhcccceeeeeccc
Confidence 467788887444 3345667777777762 223 344444432 223343333222 344554 675
Q ss_pred c---hhhhccccCcCeEEccCCcc-----hHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHH
Q 038830 210 P---QLGVLAHEATGCFLTHCGWN-----STLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAI 281 (335)
Q Consensus 210 p---q~~vL~h~~v~~fItHgG~n-----Sv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l 281 (335)
. ...+|+.+|+|.-+|-...| -+..-.-+|+|++.+-+-- --..|.+. .-|+.. .+++++
T Consensus 328 ~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkc----l~ELVkh~-eNGlvF-------~Ds~eL 395 (444)
T KOG2941|consen 328 EAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKC----LDELVKHG-ENGLVF-------EDSEEL 395 (444)
T ss_pred ccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchh----HHHHHhcC-CCceEe-------ccHHHH
Confidence 3 34899999998888776554 3455566777777664311 11222222 334444 368899
Q ss_pred HHHHHHHHcC----C-cHHHHHHHHHHH
Q 038830 282 AHCISEILEG----K-RDKEIKQNADKW 304 (335)
Q Consensus 282 ~~~i~~ll~~----~-~~~~~r~~a~~l 304 (335)
++.+..++.| . +-.++|+|+++-
T Consensus 396 a~ql~~lf~~fp~~a~~l~~lkkn~~e~ 423 (444)
T KOG2941|consen 396 AEQLQMLFKNFPDNADELNQLKKNLREE 423 (444)
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHhhHHH
Confidence 9999888863 1 124566666554
No 169
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=43.23 E-value=39 Score=28.47 Aligned_cols=27 Identities=30% Similarity=0.397 Sum_probs=20.9
Q ss_pred cCeEEccCCc------chHHHHHhcCCCeeecC
Q 038830 220 TGCFLTHCGW------NSTLEALSLGVPMVAMP 246 (335)
Q Consensus 220 v~~fItHgG~------nSv~Eal~~GVP~i~~P 246 (335)
.+.+++|.|- +.+.+|...++|||++.
T Consensus 60 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 92 (162)
T cd07038 60 LGALVTTYGVGELSALNGIAGAYAEHVPVVHIV 92 (162)
T ss_pred CEEEEEcCCccHHHHHHHHHHHHHcCCCEEEEe
Confidence 4447777763 47789999999999985
No 170
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=42.87 E-value=3e+02 Score=26.66 Aligned_cols=134 Identities=10% Similarity=0.093 Sum_probs=82.4
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHhh---CCCcEEEEEeCCC-CCcCCccch----hhcC-CceEEE-eecchh---hh
Q 038830 148 SVVYVSFGSMATLKIEEMEELPCGLKA---SDKYFLWVVRESE-QSKLPENFS----DETS-QKGLVV-NWCPQL---GV 214 (335)
Q Consensus 148 svvyvsfGS~~~~~~~~~~~l~~~l~~---~~~~flw~~~~~~-~~~l~~~~~----~~~~-~~~~v~-~w~pq~---~v 214 (335)
+-+.|-.|-.+..+.+.++. ++.|.. .+.+++.-++-+. ....-+.+. +..+ ++..+. +++|-. .+
T Consensus 184 ~~ltILvGNSgd~sNnHiea-L~~L~~~~~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~l 262 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEA-LEALKQQFGDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLAL 262 (360)
T ss_pred CceEEEEcCCCCCCccHHHH-HHHHHHhcCCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHH
Confidence 45667778877766655433 233332 3455554443221 111111111 1122 355544 677765 89
Q ss_pred ccccCcCeEEcc--CCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHc
Q 038830 215 LAHEATGCFLTH--CGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILE 290 (335)
Q Consensus 215 L~h~~v~~fItH--gG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~ 290 (335)
|+.++++-|.+. =|.|++.-.+..|+|+..- .+..--+.+.+. |+-+....+ .++...|.++=+++..
T Consensus 263 L~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~----~~np~~~~l~~~-~ipVlf~~d---~L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 263 LSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLS----RDNPFWQDLKEQ-GIPVLFYGD---ELDEALVREAQRQLAN 332 (360)
T ss_pred HHhCCEEEEeechhhhHhHHHHHHHcCCeEEEe----cCChHHHHHHhC-CCeEEeccc---cCCHHHHHHHHHHHhh
Confidence 999999887775 5899999999999999863 344444566666 666655545 6889988888887764
No 171
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=42.70 E-value=19 Score=30.75 Aligned_cols=69 Identities=14% Similarity=0.237 Sum_probs=39.1
Q ss_pred ccCcCeEEccCCcchHHHHHhcCCCeeecCCCC-----------------------ChhhhHHHHHHHhccceeecCCCC
Q 038830 217 HEATGCFLTHCGWNSTLEALSLGVPMVAMPLWT-----------------------DQSTNSKYVMDVWKMGLKVPADEK 273 (335)
Q Consensus 217 h~~v~~fItHgG~nSv~Eal~~GVP~i~~P~~~-----------------------DQ~~Na~~v~~~~g~G~~l~~~~~ 273 (335)
+..+..|||+||...++.... ++|+|-+|..+ ....+...+.+.+|+-+....-
T Consensus 32 ~~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s~~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i~~~~~-- 108 (176)
T PF06506_consen 32 SEGADVIISRGGTAELLRKHV-SIPVVEIPISGFDILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVDIKIYPY-- 108 (176)
T ss_dssp TTT-SEEEEEHHHHHHHHCC--SS-EEEE---HHHHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-EEEEEEE--
T ss_pred hcCCeEEEECCHHHHHHHHhC-CCCEEEECCCHhHHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCceEEEEE--
Confidence 344444999999999998877 99999999732 2333455555554444433321
Q ss_pred CCcCHHHHHHHHHHHHc
Q 038830 274 GIVRREAIAHCISEILE 290 (335)
Q Consensus 274 ~~~~~~~l~~~i~~ll~ 290 (335)
-+.+++...|.++..
T Consensus 109 --~~~~e~~~~i~~~~~ 123 (176)
T PF06506_consen 109 --DSEEEIEAAIKQAKA 123 (176)
T ss_dssp --SSHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHH
Confidence 256677777776653
No 172
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=41.69 E-value=77 Score=29.21 Aligned_cols=109 Identities=20% Similarity=0.295 Sum_probs=56.0
Q ss_pred CcEEEEEeCCcccCCHHHHHHHH---HHHh-hCCCcEEEEEeCCCC-CcCCccchhhcCCceEEE-eecchh--hhcccc
Q 038830 147 GSVVYVSFGSMATLKIEEMEELP---CGLK-ASDKYFLWVVRESEQ-SKLPENFSDETSQKGLVV-NWCPQL--GVLAHE 218 (335)
Q Consensus 147 ~svvyvsfGS~~~~~~~~~~~l~---~~l~-~~~~~flw~~~~~~~-~~l~~~~~~~~~~~~~v~-~w~pq~--~vL~h~ 218 (335)
++.|.|+.-+....+.+.+++++ ..+. +.+.+++++--.... ...-+.+.++++++..++ ..-|+. .+++++
T Consensus 172 ~~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~ 251 (298)
T TIGR03609 172 EPVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEELLGLFASA 251 (298)
T ss_pred CCeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhC
Confidence 45777777553333333334443 3333 347887766432111 111122223333333333 223333 678888
Q ss_pred CcCeEEccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHH
Q 038830 219 ATGCFLTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDV 261 (335)
Q Consensus 219 ~v~~fItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~ 261 (335)
++ +|+-= .-++.=|+.+|||.+++++ | +....++.+.
T Consensus 252 ~~--vI~~R-lH~~I~A~~~gvP~i~i~y--~-~K~~~~~~~~ 288 (298)
T TIGR03609 252 RL--VIGMR-LHALILAAAAGVPFVALSY--D-PKVRAFAADA 288 (298)
T ss_pred CE--EEEec-hHHHHHHHHcCCCEEEeec--c-HHHHHHHHHh
Confidence 87 77743 3345668889999998853 2 3444444444
No 173
>COG3195 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=41.65 E-value=1.1e+02 Score=26.16 Aligned_cols=96 Identities=18% Similarity=0.188 Sum_probs=61.7
Q ss_pred chhh-hccccCcCeEEccCC---cchHHHHHhcCCCeeecCCC-CChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHH
Q 038830 210 PQLG-VLAHEATGCFLTHCG---WNSTLEALSLGVPMVAMPLW-TDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHC 284 (335)
Q Consensus 210 pq~~-vL~h~~v~~fItHgG---~nSv~Eal~~GVP~i~~P~~-~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~ 284 (335)
+|.. |=.||++++-+--.| .-|+.|-..+|.=-+.==-+ -=+..|+.|.+.- |.=..+.-+ ..++++|..+
T Consensus 64 ~rl~liraHPdLAgk~a~a~elta~S~~EQasAGLd~Ls~~E~a~f~~LN~aY~~rF-gfPfI~aVk---g~~k~~Il~a 139 (176)
T COG3195 64 ERLALIRAHPDLAGKAAIAGELTAESTSEQASAGLDRLSPEEFARFTELNAAYVERF-GFPFIIAVK---GNTKDTILAA 139 (176)
T ss_pred HHHHHHHhChhhHHHHHHHHHhhhhhHHHHHhcCcccCCHHHHHHHHHHHHHHHHhc-CCceEEeec---CCCHHHHHHH
Confidence 3443 345888754444333 45777777777644321000 1146799999877 766555433 3579999999
Q ss_pred HHHHHcCCcHHHHHHHHHHHHHHHH
Q 038830 285 ISEILEGKRDKEIKQNADKWRNFAK 309 (335)
Q Consensus 285 i~~ll~~~~~~~~r~~a~~l~~~~~ 309 (335)
..+=++|++..+++....++.+.++
T Consensus 140 ~~~Rl~n~~e~E~~tAl~eI~rIA~ 164 (176)
T COG3195 140 FERRLDNDREQEFATALAEIERIAL 164 (176)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHH
Confidence 9888888877788888888777654
No 174
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=39.60 E-value=57 Score=30.11 Aligned_cols=54 Identities=13% Similarity=0.115 Sum_probs=38.7
Q ss_pred ccCcCeEEccCCcchHHHHHh------cCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHc
Q 038830 217 HEATGCFLTHCGWNSTLEALS------LGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILE 290 (335)
Q Consensus 217 h~~v~~fItHgG~nSv~Eal~------~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~ 290 (335)
.+++ +|+-||=||++.++. .++|++++-. - .+|... .++.+++.+.+.++++
T Consensus 35 ~~Dl--vi~iGGDGT~L~a~~~~~~~~~~iPilGIN~-------------G-~lGFL~------~~~~~~~~~~l~~i~~ 92 (265)
T PRK04885 35 NPDI--VISVGGDGTLLSAFHRYENQLDKVRFVGVHT-------------G-HLGFYT------DWRPFEVDKLVIALAK 92 (265)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcccCCCCeEEEEeC-------------C-Cceecc------cCCHHHHHHHHHHHHc
Confidence 3455 999999999999975 4889888743 1 223322 3567888888888887
Q ss_pred CC
Q 038830 291 GK 292 (335)
Q Consensus 291 ~~ 292 (335)
++
T Consensus 93 g~ 94 (265)
T PRK04885 93 DP 94 (265)
T ss_pred CC
Confidence 64
No 175
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=38.37 E-value=3.6e+02 Score=25.69 Aligned_cols=131 Identities=11% Similarity=0.125 Sum_probs=73.8
Q ss_pred EEEEeCCcccCCHHHHHHHHHHHh---hCCCcEEEEEeCC-CCCcCCccch----hhcC-CceEEE-eecchh---hhcc
Q 038830 150 VYVSFGSMATLKIEEMEELPCGLK---ASDKYFLWVVRES-EQSKLPENFS----DETS-QKGLVV-NWCPQL---GVLA 216 (335)
Q Consensus 150 vyvsfGS~~~~~~~~~~~l~~~l~---~~~~~flw~~~~~-~~~~l~~~~~----~~~~-~~~~v~-~w~pq~---~vL~ 216 (335)
+-|-.|..+..+.+.++ +++.|. ..+.+++.-++-+ .....-+.+. +-.+ ++..+. +++|-. .+|+
T Consensus 147 ~tIlvGNSgd~SN~Hie-~L~~l~~~~~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~ 225 (322)
T PRK02797 147 MTILVGNSGDRSNRHIE-ALRALHQQFGDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLR 225 (322)
T ss_pred eEEEEeCCCCCcccHHH-HHHHHHHHhCCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHH
Confidence 55556777766655543 333332 2344555544431 1110001111 1122 455554 566654 8999
Q ss_pred ccCcCeEEcc--CCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHH
Q 038830 217 HEATGCFLTH--CGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEIL 289 (335)
Q Consensus 217 h~~v~~fItH--gG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll 289 (335)
.++++-|+++ =|.|++.-.+..|+|++.-- +-+.+.. +.+. |+-+-...+ .++...+.++=+++.
T Consensus 226 ~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r---~n~fwqd-l~e~-gv~Vlf~~d---~L~~~~v~e~~rql~ 292 (322)
T PRK02797 226 QCDLGYFIFARQQGIGTLCLLIQLGKPVVLSR---DNPFWQD-LTEQ-GLPVLFTGD---DLDEDIVREAQRQLA 292 (322)
T ss_pred hCCEEEEeechhhHHhHHHHHHHCCCcEEEec---CCchHHH-HHhC-CCeEEecCC---cccHHHHHHHHHHHH
Confidence 9999888886 47899999999999998742 2222222 4445 555544544 567777766544443
No 176
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=36.94 E-value=70 Score=27.22 Aligned_cols=29 Identities=21% Similarity=0.321 Sum_probs=23.9
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHhhCCC
Q 038830 149 VVYVSFGSMATLKIEEMEELPCGLKASDK 177 (335)
Q Consensus 149 vvyvsfGS~~~~~~~~~~~l~~~l~~~~~ 177 (335)
.+|+++||.......+++....+|.+.+.
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~ 31 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALAD 31 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCC
Confidence 69999999987777778888888887664
No 177
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=35.50 E-value=68 Score=25.87 Aligned_cols=37 Identities=19% Similarity=0.383 Sum_probs=26.3
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHhh--CCCcEEEEEe
Q 038830 148 SVVYVSFGSMATLKIEEMEELPCGLKA--SDKYFLWVVR 184 (335)
Q Consensus 148 svvyvsfGS~~~~~~~~~~~l~~~l~~--~~~~flw~~~ 184 (335)
.+|.++|||......+.+..+.+.+.+ .+.++-|.+-
T Consensus 2 aillv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~aft 40 (127)
T cd03412 2 AILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAFT 40 (127)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 589999999987445568888888854 3456666553
No 178
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=34.48 E-value=77 Score=29.61 Aligned_cols=56 Identities=5% Similarity=0.114 Sum_probs=39.9
Q ss_pred ccccCcCeEEccCCcchHHHHHh----cCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHc
Q 038830 215 LAHEATGCFLTHCGWNSTLEALS----LGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILE 290 (335)
Q Consensus 215 L~h~~v~~fItHgG~nSv~Eal~----~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~ 290 (335)
...+++ +|+-||=||++.++. .++|++++-.. .+|... .++.+++.+++.++++
T Consensus 62 ~~~~Dl--vi~iGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFLt------~~~~~~~~~~l~~i~~ 119 (287)
T PRK14077 62 FKISDF--LISLGGDGTLISLCRKAAEYDKFVLGIHAG--------------HLGFLT------DITVDEAEKFFQAFFQ 119 (287)
T ss_pred ccCCCE--EEEECCCHHHHHHHHHhcCCCCcEEEEeCC--------------CcccCC------cCCHHHHHHHHHHHHc
Confidence 345677 999999999998765 47888877421 223322 3678888999998887
Q ss_pred CC
Q 038830 291 GK 292 (335)
Q Consensus 291 ~~ 292 (335)
++
T Consensus 120 g~ 121 (287)
T PRK14077 120 GE 121 (287)
T ss_pred CC
Confidence 64
No 179
>PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function.
Probab=33.32 E-value=18 Score=34.26 Aligned_cols=76 Identities=16% Similarity=0.363 Sum_probs=42.4
Q ss_pred cchHHHHHhcCCCeeecCCCCChhhhHHHHH-----HH-hccceeecCCCCCCcCHHHHHHHHHHHHcCCcH-HHHHHHH
Q 038830 229 WNSTLEALSLGVPMVAMPLWTDQSTNSKYVM-----DV-WKMGLKVPADEKGIVRREAIAHCISEILEGKRD-KEIKQNA 301 (335)
Q Consensus 229 ~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~-----~~-~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~-~~~r~~a 301 (335)
||=..--++.=.|.++||+..|+..|.-+.+ .. |=.++......-......-+...|+++.++++| +.+++..
T Consensus 15 ~~y~~p~~~~llp~~~~pfls~~qk~y~~f~f~~iss~gwff~i~~re~qlk~aa~~llq~kirk~~e~~eglr~i~es~ 94 (401)
T PF06785_consen 15 YNYFFPVAAFLLPLVCYPFLSDSQKNYGYFVFSIISSLGWFFAIGRREKQLKTAAGQLLQTKIRKITEKDEGLRKIRESV 94 (401)
T ss_pred HhhhhhHHHHHHHHhHhhhcCHHHHhcceeehHHHHHhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 4444445556679999999999988875432 22 111222221100011223367778888887776 5566555
Q ss_pred HHH
Q 038830 302 DKW 304 (335)
Q Consensus 302 ~~l 304 (335)
++-
T Consensus 95 ~e~ 97 (401)
T PF06785_consen 95 EER 97 (401)
T ss_pred HHH
Confidence 443
No 180
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=33.05 E-value=2.2e+02 Score=26.60 Aligned_cols=96 Identities=18% Similarity=0.255 Sum_probs=55.4
Q ss_pred cEEEEEeCCccc--CCHHHHHH----HHHHHhhCCCcEEEEEeCCCCCcCCccchhhcC-CceEE-----Eeecchhhhc
Q 038830 148 SVVYVSFGSMAT--LKIEEMEE----LPCGLKASDKYFLWVVRESEQSKLPENFSDETS-QKGLV-----VNWCPQLGVL 215 (335)
Q Consensus 148 svvyvsfGS~~~--~~~~~~~~----l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~-~~~~v-----~~w~pq~~vL 215 (335)
-|-.+-.|+... ...++..+ +.+.|++.|.+|+........+....-+..++. ..+.+ .++-|..++|
T Consensus 163 ~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRRTp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~L 242 (329)
T COG3660 163 RVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRRTPDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDML 242 (329)
T ss_pred eEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecCCcHHHHHHHHhccccCceeEeCCCCCCCCchHHHH
Confidence 355556666653 33455444 444567788898876643211111111111111 11222 2355888999
Q ss_pred cccCcCeEEccCC-cchHHHHHhcCCCeeec
Q 038830 216 AHEATGCFLTHCG-WNSTLEALSLGVPMVAM 245 (335)
Q Consensus 216 ~h~~v~~fItHgG-~nSv~Eal~~GVP~i~~ 245 (335)
+.++. +|+-.. .|...||.+.|+|+-+.
T Consensus 243 a~Ady--ii~TaDSinM~sEAasTgkPv~~~ 271 (329)
T COG3660 243 AAADY--IISTADSINMCSEAASTGKPVFIL 271 (329)
T ss_pred hhcce--EEEecchhhhhHHHhccCCCeEEE
Confidence 99887 766655 57889999999998743
No 181
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=32.89 E-value=78 Score=29.60 Aligned_cols=55 Identities=16% Similarity=0.288 Sum_probs=39.7
Q ss_pred cccCcCeEEccCCcchHHHHHh----cCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcC
Q 038830 216 AHEATGCFLTHCGWNSTLEALS----LGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEG 291 (335)
Q Consensus 216 ~h~~v~~fItHgG~nSv~Eal~----~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 291 (335)
..+++ +|+-||=||+++++. .++|++++-+ - .+|... .++.+++.+++.+++++
T Consensus 62 ~~~d~--vi~~GGDGt~l~~~~~~~~~~~pilGIn~-------------G-~lGFL~------~~~~~~~~~~l~~~~~g 119 (291)
T PRK02155 62 ARADL--AVVLGGDGTMLGIGRQLAPYGVPLIGINH-------------G-RLGFIT------DIPLDDMQETLPPMLAG 119 (291)
T ss_pred cCCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEcC-------------C-Cccccc------cCCHHHHHHHHHHHHcC
Confidence 34667 999999999999976 3678887642 1 224333 35778888999888876
Q ss_pred C
Q 038830 292 K 292 (335)
Q Consensus 292 ~ 292 (335)
+
T Consensus 120 ~ 120 (291)
T PRK02155 120 N 120 (291)
T ss_pred C
Confidence 5
No 182
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=32.81 E-value=1.2e+02 Score=28.89 Aligned_cols=105 Identities=10% Similarity=0.143 Sum_probs=56.9
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHh-hCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchhhhccccCcCeEE
Q 038830 146 NGSVVYVSFGSMATLKIEEMEELPCGLK-ASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFL 224 (335)
Q Consensus 146 ~~svvyvsfGS~~~~~~~~~~~l~~~l~-~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~v~~fI 224 (335)
.+.+..|.+|+++. ++++.+. ..|.+++..-+.. ++...... . ..+.+..++|+.+|+ ++
T Consensus 145 gktvGIiG~G~IG~-------~va~~l~~~fgm~V~~~~~~~-----~~~~~~~~--~---~~~~~l~ell~~sDv--v~ 205 (323)
T PRK15409 145 HKTLGIVGMGRIGM-------ALAQRAHFGFNMPILYNARRH-----HKEAEERF--N---ARYCDLDTLLQESDF--VC 205 (323)
T ss_pred CCEEEEEcccHHHH-------HHHHHHHhcCCCEEEEECCCC-----chhhHHhc--C---cEecCHHHHHHhCCE--EE
Confidence 35577999999884 4455454 5678877432221 11100000 1 235567789999999 88
Q ss_pred ccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhcc-ceeecCCCCCCcCHHHHHHHHH
Q 038830 225 THCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKM-GLKVPADEKGIVRREAIAHCIS 286 (335)
Q Consensus 225 tHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~-G~~l~~~~~~~~~~~~l~~~i~ 286 (335)
.||-.+.-.+ ...|+..+... += ++.++....+.++.+.|.++++
T Consensus 206 lh~plt~~T~----------------~li~~~~l~~m-k~ga~lIN~aRG~vVde~AL~~AL~ 251 (323)
T PRK15409 206 IILPLTDETH----------------HLFGAEQFAKM-KSSAIFINAGRGPVVDENALIAALQ 251 (323)
T ss_pred EeCCCChHHh----------------hccCHHHHhcC-CCCeEEEECCCccccCHHHHHHHHH
Confidence 8886543322 23455555544 32 2333333333556666666554
No 183
>PRK00923 sirohydrochlorin cobaltochelatase; Reviewed
Probab=32.69 E-value=2.1e+02 Score=22.69 Aligned_cols=27 Identities=19% Similarity=0.271 Sum_probs=19.6
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHhh
Q 038830 148 SVVYVSFGSMATLKIEEMEELPCGLKA 174 (335)
Q Consensus 148 svvyvsfGS~~~~~~~~~~~l~~~l~~ 174 (335)
.+|+++.||........+.+++..+.+
T Consensus 3 ~lvlv~hGS~~~~~~~~~~~~~~~l~~ 29 (126)
T PRK00923 3 GLLLVGHGSRLPYNKEVVTKIAEKIKE 29 (126)
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHHH
Confidence 578899998764444667778888765
No 184
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=31.95 E-value=98 Score=23.42 Aligned_cols=27 Identities=26% Similarity=0.342 Sum_probs=19.8
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHhhC
Q 038830 149 VVYVSFGSMATLKIEEMEELPCGLKAS 175 (335)
Q Consensus 149 vvyvsfGS~~~~~~~~~~~l~~~l~~~ 175 (335)
+|+|+.||........+.+++..+.+.
T Consensus 2 ivlv~hGS~~~~~~~~~~~l~~~l~~~ 28 (101)
T cd03416 2 LLLVGHGSRDPRAAEALEALAERLRER 28 (101)
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHhh
Confidence 788999997754455677888888653
No 185
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=31.87 E-value=1.5e+02 Score=27.87 Aligned_cols=101 Identities=14% Similarity=0.173 Sum_probs=61.2
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchhhhccccCcCeEEc
Q 038830 146 NGSVVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLT 225 (335)
Q Consensus 146 ~~svvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~v~~fIt 225 (335)
.+.+..|.+|+++. ++++-+...|.+++..-+.. . .. .. ...+.+..++|+.+|+ ++-
T Consensus 145 gktvGIiG~G~IG~-------~vA~~~~~fgm~V~~~d~~~-~---~~-------~~--~~~~~~l~ell~~sDv--v~l 202 (311)
T PRK08410 145 GKKWGIIGLGTIGK-------RVAKIAQAFGAKVVYYSTSG-K---NK-------NE--EYERVSLEELLKTSDI--ISI 202 (311)
T ss_pred CCEEEEECCCHHHH-------HHHHHHhhcCCEEEEECCCc-c---cc-------cc--CceeecHHHHhhcCCE--EEE
Confidence 45688899998883 44454555588876432211 0 00 00 1234567799999999 887
Q ss_pred cCCcchHHHHHhcCCCeeecCCCC--ChhhhHHHHHHHhccc-eeecCCCCCCcCHHHHHHHHHH
Q 038830 226 HCGWNSTLEALSLGVPMVAMPLWT--DQSTNSKYVMDVWKMG-LKVPADEKGIVRREAIAHCISE 287 (335)
Q Consensus 226 HgG~nSv~Eal~~GVP~i~~P~~~--DQ~~Na~~v~~~~g~G-~~l~~~~~~~~~~~~l~~~i~~ 287 (335)
|+ |+.. ....|++.+... +=| +.++....+.++.+.|.++++.
T Consensus 203 h~------------------Plt~~T~~li~~~~~~~M-k~~a~lIN~aRG~vVDe~AL~~AL~~ 248 (311)
T PRK08410 203 HA------------------PLNEKTKNLIAYKELKLL-KDGAILINVGRGGIVNEKDLAKALDE 248 (311)
T ss_pred eC------------------CCCchhhcccCHHHHHhC-CCCeEEEECCCccccCHHHHHHHHHc
Confidence 76 5542 346677777766 544 4444443346777777777753
No 186
>PRK08155 acetolactate synthase catalytic subunit; Validated
Probab=30.70 E-value=75 Score=32.48 Aligned_cols=27 Identities=15% Similarity=0.256 Sum_probs=21.4
Q ss_pred cCeEEccCCc------chHHHHHhcCCCeeecC
Q 038830 220 TGCFLTHCGW------NSTLEALSLGVPMVAMP 246 (335)
Q Consensus 220 v~~fItHgG~------nSv~Eal~~GVP~i~~P 246 (335)
.+++++|.|- +.+.||...++|+|++.
T Consensus 77 ~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i~ 109 (564)
T PRK08155 77 PAVCMACSGPGATNLVTAIADARLDSIPLVCIT 109 (564)
T ss_pred CeEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 3448888774 47899999999999874
No 187
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=30.67 E-value=72 Score=29.44 Aligned_cols=38 Identities=16% Similarity=0.243 Sum_probs=23.4
Q ss_pred cEEEEEeCCcccCCHH-HHHHHHHHHhh--CCCcEEEEEeC
Q 038830 148 SVVYVSFGSMATLKIE-EMEELPCGLKA--SDKYFLWVVRE 185 (335)
Q Consensus 148 svvyvsfGS~~~~~~~-~~~~l~~~l~~--~~~~flw~~~~ 185 (335)
.+|.|||||...-..+ .+..+-+.+++ .++++.|.+.+
T Consensus 2 AIllvsFGTs~~~ar~~ti~~ie~~~~~~fp~~~V~~AfTS 42 (262)
T PF06180_consen 2 AILLVSFGTSYPEAREKTIDAIEKAVREAFPDYDVRRAFTS 42 (262)
T ss_dssp EEEEEE---S-CCCCHHHHHHHHHHHHHCSTTSEEEEEES-
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEchH
Confidence 4789999998765444 56666666655 57888888764
No 188
>PRK06932 glycerate dehydrogenase; Provisional
Probab=30.53 E-value=1.3e+02 Score=28.28 Aligned_cols=101 Identities=16% Similarity=0.180 Sum_probs=60.7
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchhhhccccCcCeEEc
Q 038830 146 NGSVVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLT 225 (335)
Q Consensus 146 ~~svvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~v~~fIt 225 (335)
.+.|..|.+|+++. ++++.+...|.+++.. .... ... ....+.+..++|+.+|+ ++-
T Consensus 147 gktvgIiG~G~IG~-------~va~~l~~fg~~V~~~-~~~~----~~~---------~~~~~~~l~ell~~sDi--v~l 203 (314)
T PRK06932 147 GSTLGVFGKGCLGT-------EVGRLAQALGMKVLYA-EHKG----ASV---------CREGYTPFEEVLKQADI--VTL 203 (314)
T ss_pred CCEEEEECCCHHHH-------HHHHHHhcCCCEEEEE-CCCc----ccc---------cccccCCHHHHHHhCCE--EEE
Confidence 35678899998884 4555566668887643 2110 000 01134566799999999 888
Q ss_pred cCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccc-eeecCCCCCCcCHHHHHHHHH
Q 038830 226 HCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMG-LKVPADEKGIVRREAIAHCIS 286 (335)
Q Consensus 226 HgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G-~~l~~~~~~~~~~~~l~~~i~ 286 (335)
||-.+.- .....|++.+... +=| +.++....+.++.+.|.++++
T Consensus 204 ~~Plt~~----------------T~~li~~~~l~~m-k~ga~lIN~aRG~~Vde~AL~~aL~ 248 (314)
T PRK06932 204 HCPLTET----------------TQNLINAETLALM-KPTAFLINTGRGPLVDEQALLDALE 248 (314)
T ss_pred cCCCChH----------------HhcccCHHHHHhC-CCCeEEEECCCccccCHHHHHHHHH
Confidence 8744322 2345677777766 433 444444334677777777765
No 189
>PRK06270 homoserine dehydrogenase; Provisional
Probab=29.70 E-value=2.7e+02 Score=26.55 Aligned_cols=39 Identities=23% Similarity=0.257 Sum_probs=25.8
Q ss_pred hhhhccccCcCeEEc------cCC---cchHHHHHhcCCCeee---cCCCC
Q 038830 211 QLGVLAHEATGCFLT------HCG---WNSTLEALSLGVPMVA---MPLWT 249 (335)
Q Consensus 211 q~~vL~h~~v~~fIt------HgG---~nSv~Eal~~GVP~i~---~P~~~ 249 (335)
-.++|.++++..+|- |+| ..-+.+++.+|+++|+ -|+..
T Consensus 81 ~~ell~~~~~DvVvd~T~s~~~~~~~a~~~~~~aL~~GkhVVtaNK~pla~ 131 (341)
T PRK06270 81 GLEVIRSVDADVVVEATPTNIETGEPALSHCRKALERGKHVVTSNKGPLAL 131 (341)
T ss_pred HHHHhhccCCCEEEECCcCcccccchHHHHHHHHHHCCCEEEcCCcHHHHh
Confidence 346676555444665 443 4456899999999998 47643
No 190
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=29.70 E-value=1e+02 Score=28.71 Aligned_cols=27 Identities=11% Similarity=0.384 Sum_probs=23.9
Q ss_pred ccCcCeEEccCCcchHHHHHhcCCCeeec
Q 038830 217 HEATGCFLTHCGWNSTLEALSLGVPMVAM 245 (335)
Q Consensus 217 h~~v~~fItHgG~nSv~Eal~~GVP~i~~ 245 (335)
.||+ +|++++..+..-|-..|+|.+.+
T Consensus 93 ~pDl--Vi~d~~~~~~~aA~~~~iP~i~i 119 (321)
T TIGR00661 93 NPDL--IISDFEYSTVVAAKLLKIPVICI 119 (321)
T ss_pred CCCE--EEECCchHHHHHHHhcCCCEEEE
Confidence 4566 99999999999999999999965
No 191
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=29.51 E-value=3.3e+02 Score=25.66 Aligned_cols=105 Identities=6% Similarity=-0.003 Sum_probs=55.9
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchhhhccccCcCeEEc
Q 038830 146 NGSVVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLT 225 (335)
Q Consensus 146 ~~svvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~v~~fIt 225 (335)
.+.|.+|.+|+++. ++++-|...|.+++..-+... .. .++ ........-.++|+.+++ ++.
T Consensus 136 g~tvgIvG~G~IG~-------~vA~~l~afG~~V~~~~~~~~--~~-~~~-------~~~~~~~~l~e~l~~aDv--vv~ 196 (312)
T PRK15469 136 DFTIGILGAGVLGS-------KVAQSLQTWGFPLRCWSRSRK--SW-PGV-------QSFAGREELSAFLSQTRV--LIN 196 (312)
T ss_pred CCEEEEECCCHHHH-------HHHHHHHHCCCEEEEEeCCCC--CC-CCc-------eeecccccHHHHHhcCCE--EEE
Confidence 45688999999884 566666667888653322110 00 011 011122233478899999 888
Q ss_pred cCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhcc-ceeecCCCCCCcCHHHHHHHHH
Q 038830 226 HCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKM-GLKVPADEKGIVRREAIAHCIS 286 (335)
Q Consensus 226 HgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~-G~~l~~~~~~~~~~~~l~~~i~ 286 (335)
|+-.+.-.+. ..|+..+... += ++.++....+.+..+.|.++++
T Consensus 197 ~lPlt~~T~~----------------li~~~~l~~m-k~ga~lIN~aRG~vVde~aL~~aL~ 241 (312)
T PRK15469 197 LLPNTPETVG----------------IINQQLLEQL-PDGAYLLNLARGVHVVEDDLLAALD 241 (312)
T ss_pred CCCCCHHHHH----------------HhHHHHHhcC-CCCcEEEECCCccccCHHHHHHHHh
Confidence 8765543332 3355544443 32 2334433333566666666654
No 192
>PRK07574 formate dehydrogenase; Provisional
Probab=29.34 E-value=1.9e+02 Score=28.29 Aligned_cols=72 Identities=18% Similarity=0.194 Sum_probs=41.5
Q ss_pred CcEEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchhhhccccCcCeEEcc
Q 038830 147 GSVVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTH 226 (335)
Q Consensus 147 ~svvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~v~~fItH 226 (335)
+.|..|.+|+++. .+++.|...|..++. +.... .+....+.. . +.....-.++++.+++ ++.|
T Consensus 193 ktVGIvG~G~IG~-------~vA~~l~~fG~~V~~-~dr~~---~~~~~~~~~--g--~~~~~~l~ell~~aDv--V~l~ 255 (385)
T PRK07574 193 MTVGIVGAGRIGL-------AVLRRLKPFDVKLHY-TDRHR---LPEEVEQEL--G--LTYHVSFDSLVSVCDV--VTIH 255 (385)
T ss_pred CEEEEECCCHHHH-------HHHHHHHhCCCEEEE-ECCCC---CchhhHhhc--C--ceecCCHHHHhhcCCE--EEEc
Confidence 4578888888873 566666667887653 33211 111111100 1 1122445689999999 9999
Q ss_pred CCcchHHHH
Q 038830 227 CGWNSTLEA 235 (335)
Q Consensus 227 gG~nSv~Ea 235 (335)
|-.+.-.+.
T Consensus 256 lPlt~~T~~ 264 (385)
T PRK07574 256 CPLHPETEH 264 (385)
T ss_pred CCCCHHHHH
Confidence 876654443
No 193
>COG1154 Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism]
Probab=28.99 E-value=3.9e+02 Score=27.78 Aligned_cols=117 Identities=26% Similarity=0.296 Sum_probs=59.7
Q ss_pred HHhhcCCCCcEEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchhhhcccc
Q 038830 139 KWLNDRANGSVVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHE 218 (335)
Q Consensus 139 ~wLd~~~~~svvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~ 218 (335)
+|.-.++...|+.++||++.. .....++.|.+.|...- ++.......+.+++..+ +..+-
T Consensus 494 k~~i~~~G~~vail~~G~~~~----~al~vae~L~~~Gi~~T-Vvd~rfvkPlD~~ll~~---------------La~~h 553 (627)
T COG1154 494 KGELLKEGEKVAILAFGTMLP----EALKVAEKLNAYGISVT-VVDPRFVKPLDEALLLE---------------LAKSH 553 (627)
T ss_pred ceEEEecCCcEEEEecchhhH----HHHHHHHHHHhcCCCcE-EEcCeecCCCCHHHHHH---------------HHhhc
Confidence 354344566799999999884 33455666666554322 11111112233332222 12222
Q ss_pred CcCeEEc------cCCcch-HHHHHh-cC--CCee--ecCC-CCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHH
Q 038830 219 ATGCFLT------HCGWNS-TLEALS-LG--VPMV--AMPL-WTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCI 285 (335)
Q Consensus 219 ~v~~fIt------HgG~nS-v~Eal~-~G--VP~i--~~P~-~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i 285 (335)
++ +|| +||.+| ++|.+. +| +|++ ++|- |-||-.-...+.+. .++.+.|.+.|
T Consensus 554 ~~--~vtlEe~~~~GG~Gs~v~efl~~~~~~~~v~~lglpd~fi~hg~~~el~~~~-------------gLd~~~i~~~i 618 (627)
T COG1154 554 DL--VVTLEENVVDGGFGSAVLEFLAAHGILVPVLNLGLPDEFIDHGSPEELLAEL-------------GLDAEGIARRI 618 (627)
T ss_pred Ce--EEEEecCcccccHHHHHHHHHHhcCCCCceEEecCChHhhccCCHHHHHHHc-------------CCCHHHHHHHH
Confidence 22 333 788876 566654 44 5655 3342 34444444444443 25677777777
Q ss_pred HHHHc
Q 038830 286 SEILE 290 (335)
Q Consensus 286 ~~ll~ 290 (335)
...+.
T Consensus 619 ~~~l~ 623 (627)
T COG1154 619 LEWLK 623 (627)
T ss_pred HHHHh
Confidence 76664
No 194
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=28.98 E-value=1.1e+02 Score=28.57 Aligned_cols=55 Identities=20% Similarity=0.389 Sum_probs=40.9
Q ss_pred cccCcCeEEccCCcchHHHHHh----cCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcC
Q 038830 216 AHEATGCFLTHCGWNSTLEALS----LGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEG 291 (335)
Q Consensus 216 ~h~~v~~fItHgG~nSv~Eal~----~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 291 (335)
..+++ +|+=||=||++.+.. .++|++++-+. .+|... .++.+++.+++.+++++
T Consensus 63 ~~~dl--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFLt------~~~~~~~~~~l~~i~~g 120 (292)
T PRK01911 63 GSADM--VISIGGDGTFLRTATYVGNSNIPILGINTG--------------RLGFLA------TVSKEEIEETIDELLNG 120 (292)
T ss_pred cCCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEecC--------------CCCccc------ccCHHHHHHHHHHHHcC
Confidence 45677 999999999999877 47898887431 234332 36788999999999976
Q ss_pred C
Q 038830 292 K 292 (335)
Q Consensus 292 ~ 292 (335)
+
T Consensus 121 ~ 121 (292)
T PRK01911 121 D 121 (292)
T ss_pred C
Confidence 5
No 195
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=28.32 E-value=1.8e+02 Score=27.95 Aligned_cols=105 Identities=20% Similarity=0.322 Sum_probs=62.1
Q ss_pred CCCcEEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchhhhccccCcCeEE
Q 038830 145 ANGSVVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFL 224 (335)
Q Consensus 145 ~~~svvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~v~~fI 224 (335)
..+.|..+.+|+++. .+++-|...+..+....+.. .+.....+.. .....-.+.+..+++ +|
T Consensus 161 ~gK~vgilG~G~IG~-------~ia~rL~~Fg~~i~y~~r~~----~~~~~~~~~~-----~~~~d~~~~~~~sD~--iv 222 (336)
T KOG0069|consen 161 EGKTVGILGLGRIGK-------AIAKRLKPFGCVILYHSRTQ----LPPEEAYEYY-----AEFVDIEELLANSDV--IV 222 (336)
T ss_pred cCCEEEEecCcHHHH-------HHHHhhhhccceeeeecccC----CchhhHHHhc-----ccccCHHHHHhhCCE--EE
Confidence 345688999999984 56666766675555544432 1111111110 014455678888888 76
Q ss_pred ccCCcchHHHHHhcCCCeeecCCCC--ChhhhHHHHHHHhccceee-cCCCCCCcCHHHHHHHHH
Q 038830 225 THCGWNSTLEALSLGVPMVAMPLWT--DQSTNSKYVMDVWKMGLKV-PADEKGIVRREAIAHCIS 286 (335)
Q Consensus 225 tHgG~nSv~Eal~~GVP~i~~P~~~--DQ~~Na~~v~~~~g~G~~l-~~~~~~~~~~~~l~~~i~ 286 (335)
-|| |+.. ..-.|.+.++.. +-|..+ +....+.+..+++.++++
T Consensus 223 v~~------------------pLt~~T~~liNk~~~~~m-k~g~vlVN~aRG~iide~~l~eaL~ 268 (336)
T KOG0069|consen 223 VNC------------------PLTKETRHLINKKFIEKM-KDGAVLVNTARGAIIDEEALVEALK 268 (336)
T ss_pred Eec------------------CCCHHHHHHhhHHHHHhc-CCCeEEEeccccccccHHHHHHHHh
Confidence 666 5543 345688888887 766555 333233677777777765
No 196
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=28.24 E-value=52 Score=22.57 Aligned_cols=56 Identities=14% Similarity=0.267 Sum_probs=34.0
Q ss_pred cCCCCCCcCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 038830 269 PADEKGIVRREAIAHCISEILEGKRDKEIKQNADKWRNFAKEAVAKGGSSDKNIDDFVAN 328 (335)
Q Consensus 269 ~~~~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~ggss~~~l~~~v~~ 328 (335)
+.+.+|.++.+++.+.++.+......+..++ .-+.+-+.+...++...++++|++.
T Consensus 10 D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~d~dG~i~~~Ef~~~ 65 (66)
T PF13499_consen 10 DKDGDGYISKEELRRALKHLGRDMSDEESDE----MIDQIFREFDTDGDGRISFDEFLNF 65 (66)
T ss_dssp STTSSSEEEHHHHHHHHHHTTSHSTHHHHHH----HHHHHHHHHTTTSSSSEEHHHHHHH
T ss_pred cCCccCCCCHHHHHHHHHHhcccccHHHHHH----HHHHHHHHhCCCCcCCCcHHHHhcc
Confidence 3445678999999999988865331112333 3333333446667767777777653
No 197
>PF04558 tRNA_synt_1c_R1: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 ; InterPro: IPR007639 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This is a domain found N-terminal to the catalytic domain of glutaminyl-tRNA synthetase (6.1.1.18 from EC) in eukaryotes but not in Escherichia coli. This domain is thought to bind RNA in a non-specific manner, enhancing interactions between the tRNA and enzyme, but is not essential for enzyme function [].; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3TL4_X.
Probab=28.09 E-value=58 Score=27.81 Aligned_cols=28 Identities=18% Similarity=0.261 Sum_probs=18.1
Q ss_pred HHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 257 YVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 257 ~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
-+++..|+|+.+ |+|+|.++|.++++..
T Consensus 106 ~Fe~~cGVGV~V--------T~E~I~~~V~~~i~~~ 133 (164)
T PF04558_consen 106 EFEKACGVGVVV--------TPEQIEAAVEKYIEEN 133 (164)
T ss_dssp HHHHTTTTT------------HHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCeEE--------CHHHHHHHHHHHHHHh
Confidence 333434888765 8999999999999644
No 198
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=27.96 E-value=42 Score=31.35 Aligned_cols=38 Identities=24% Similarity=0.434 Sum_probs=30.7
Q ss_pred CCcchHHH--HHhcCCCeeecCCCCChhhhHHH-HHHHhccc
Q 038830 227 CGWNSTLE--ALSLGVPMVAMPLWTDQSTNSKY-VMDVWKMG 265 (335)
Q Consensus 227 gG~nSv~E--al~~GVP~i~~P~~~DQ~~Na~~-v~~~~g~G 265 (335)
||||+++- |-.+||-++++-+...|..+++. +.+. |+-
T Consensus 81 CGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~-gl~ 121 (283)
T COG2230 81 CGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAAR-GLE 121 (283)
T ss_pred CChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHc-CCC
Confidence 79997765 44479999999999999999987 5555 777
No 199
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=27.91 E-value=96 Score=28.39 Aligned_cols=54 Identities=17% Similarity=0.268 Sum_probs=38.7
Q ss_pred ccCcCeEEccCCcchHHHHHh-cCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 217 HEATGCFLTHCGWNSTLEALS-LGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 217 h~~v~~fItHgG~nSv~Eal~-~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
++++ +|+=||=||++.++. .++|++++-.. .+|... .++.+++.+++.++++++
T Consensus 41 ~~d~--vi~iGGDGT~L~a~~~~~~Pilgin~G--------------~lGfl~------~~~~~~~~~~l~~~~~g~ 95 (256)
T PRK14075 41 TADL--IIVVGGDGTVLKAAKKVGTPLVGFKAG--------------RLGFLS------SYTLEEIDRFLEDLKNWN 95 (256)
T ss_pred CCCE--EEEECCcHHHHHHHHHcCCCEEEEeCC--------------CCcccc------ccCHHHHHHHHHHHHcCC
Confidence 4456 999999999999976 57888776421 123333 356788889998888764
No 200
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=27.77 E-value=1.1e+02 Score=28.92 Aligned_cols=55 Identities=16% Similarity=0.293 Sum_probs=40.1
Q ss_pred cccCcCeEEccCCcchHHHHHhc----CCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcC
Q 038830 216 AHEATGCFLTHCGWNSTLEALSL----GVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEG 291 (335)
Q Consensus 216 ~h~~v~~fItHgG~nSv~Eal~~----GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 291 (335)
..+++ +|+=||=||++.++.. ++|++++-+ - .+|... .++.+++.+++.+++++
T Consensus 67 ~~~Dl--vi~iGGDGTlL~aar~~~~~~iPilGIN~-------------G-~lGFLt------~~~~~~~~~~l~~l~~g 124 (305)
T PRK02649 67 SSMKF--AIVLGGDGTVLSAARQLAPCGIPLLTINT-------------G-HLGFLT------EAYLNQLDEAIDQVLAG 124 (305)
T ss_pred cCcCE--EEEEeCcHHHHHHHHHhcCCCCcEEEEeC-------------C-CCcccc------cCCHHHHHHHHHHHHcC
Confidence 34566 9999999999999763 789888742 1 223222 35788899999999876
Q ss_pred C
Q 038830 292 K 292 (335)
Q Consensus 292 ~ 292 (335)
+
T Consensus 125 ~ 125 (305)
T PRK02649 125 Q 125 (305)
T ss_pred C
Confidence 5
No 201
>PF12363 DUF3647: Phage protein ; InterPro: IPR024410 Proteins in this entry are frequently annotated as phage proteins, however there is little accompanying literature to back this up or to describe the nature of these phage proteins.
Probab=27.72 E-value=2.6e+02 Score=22.07 Aligned_cols=37 Identities=19% Similarity=0.224 Sum_probs=27.9
Q ss_pred hhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 253 TNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 253 ~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
.|...+++.|.+|..-... ..|.++|.+.|.++.+++
T Consensus 48 ~d~~al~d~i~~a~~~~~~---~~s~~eIe~~ie~~~e~~ 84 (113)
T PF12363_consen 48 GDPVALADIIYAATAHEKK---RPSREEIEDYIEDIIEDE 84 (113)
T ss_pred CCHHHHHHHHHHHhcccCC---CCCHHHHHHHHHHHHhcc
Confidence 4566677777878766544 569999999999987765
No 202
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=27.69 E-value=1.1e+02 Score=19.82 Aligned_cols=26 Identities=27% Similarity=0.514 Sum_probs=18.6
Q ss_pred CHHHHHHHHHHHHcCCcHHHHHHHHHHH
Q 038830 277 RREAIAHCISEILEGKRDKEIKQNADKW 304 (335)
Q Consensus 277 ~~~~l~~~i~~ll~~~~~~~~r~~a~~l 304 (335)
+.++|.+||..+.++. .++++.|++.
T Consensus 1 tee~l~~Ai~~v~~g~--~S~r~AA~~y 26 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGK--MSIRKAAKKY 26 (45)
T ss_dssp -HHHHHHHHHHHHTTS--S-HHHHHHHH
T ss_pred CHHHHHHHHHHHHhCC--CCHHHHHHHH
Confidence 4688999999998764 2777777664
No 203
>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase. 2-oxoglutarate decarboxylase/SHCHC synthase (menD) is a thiamine pyrophosphate enzyme involved in menaquinone biosynthesis.
Probab=27.54 E-value=2e+02 Score=28.25 Aligned_cols=26 Identities=23% Similarity=0.397 Sum_probs=21.1
Q ss_pred cCeEEccCCc------chHHHHHhcCCCeeec
Q 038830 220 TGCFLTHCGW------NSTLEALSLGVPMVAM 245 (335)
Q Consensus 220 v~~fItHgG~------nSv~Eal~~GVP~i~~ 245 (335)
.+++++|+|- +.+.||.+.++|+|++
T Consensus 64 ~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i 95 (432)
T TIGR00173 64 PVAVVCTSGTAVANLLPAVIEASYSGVPLIVL 95 (432)
T ss_pred CEEEEECCcchHhhhhHHHHHhcccCCcEEEE
Confidence 3448888874 4788999999999988
No 204
>PRK06487 glycerate dehydrogenase; Provisional
Probab=27.23 E-value=1.7e+02 Score=27.69 Aligned_cols=100 Identities=16% Similarity=0.204 Sum_probs=59.2
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchhhhccccCcCeEEc
Q 038830 146 NGSVVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLT 225 (335)
Q Consensus 146 ~~svvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~v~~fIt 225 (335)
.+.+..|.+|+++. ++++.+...|.+++..-+... +. ...++.-.++|+.+|+ ++-
T Consensus 148 gktvgIiG~G~IG~-------~vA~~l~~fgm~V~~~~~~~~----~~-----------~~~~~~l~ell~~sDi--v~l 203 (317)
T PRK06487 148 GKTLGLLGHGELGG-------AVARLAEAFGMRVLIGQLPGR----PA-----------RPDRLPLDELLPQVDA--LTL 203 (317)
T ss_pred CCEEEEECCCHHHH-------HHHHHHhhCCCEEEEECCCCC----cc-----------cccccCHHHHHHhCCE--EEE
Confidence 45678888888883 455666666888764322110 00 0123456789999999 888
Q ss_pred cCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccc-eeecCCCCCCcCHHHHHHHHH
Q 038830 226 HCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMG-LKVPADEKGIVRREAIAHCIS 286 (335)
Q Consensus 226 HgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G-~~l~~~~~~~~~~~~l~~~i~ 286 (335)
|+-.+.- .....|+..+... +=| +.++....+.++.+.|.++++
T Consensus 204 ~lPlt~~----------------T~~li~~~~~~~m-k~ga~lIN~aRG~vVde~AL~~AL~ 248 (317)
T PRK06487 204 HCPLTEH----------------TRHLIGARELALM-KPGALLINTARGGLVDEQALADALR 248 (317)
T ss_pred CCCCChH----------------HhcCcCHHHHhcC-CCCeEEEECCCccccCHHHHHHHHH
Confidence 8744322 2345677766665 433 444443334667777777665
No 205
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=27.15 E-value=97 Score=28.71 Aligned_cols=75 Identities=13% Similarity=0.145 Sum_probs=47.6
Q ss_pred cCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchhhhccccCcCeEEccCCcchHHHHHhc
Q 038830 159 TLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTLEALSL 238 (335)
Q Consensus 159 ~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~v~~fItHgG~nSv~Eal~~ 238 (335)
..+.+..+++.+++.....+.||.++++... .++.++++-..+-+||.+ |+=+.-..+++-+++.
T Consensus 45 ~s~~~Ra~dL~~a~~d~~i~aI~~~rGG~ga-------------~rlL~~ld~~~~~~~pK~--~iGySDiTaL~~~l~~ 109 (282)
T cd07025 45 GTDEERAADLNAAFADPEIKAIWCARGGYGA-------------NRLLPYLDYDLIRANPKI--FVGYSDITALHLALYA 109 (282)
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEcCCcCCH-------------HHhhhhCCHHHHhhCCeE--EEEecHHHHHHHHHHH
Confidence 3445668899999999999999999876321 122333333333356655 6666666666666542
Q ss_pred --CCCeeecCCC
Q 038830 239 --GVPMVAMPLW 248 (335)
Q Consensus 239 --GVP~i~~P~~ 248 (335)
|++.+--|+.
T Consensus 110 ~~g~~t~hGp~~ 121 (282)
T cd07025 110 KTGLVTFHGPML 121 (282)
T ss_pred hcCceEEECccc
Confidence 6666666654
No 206
>PRK08322 acetolactate synthase; Reviewed
Probab=26.20 E-value=1.1e+02 Score=31.15 Aligned_cols=27 Identities=33% Similarity=0.390 Sum_probs=21.9
Q ss_pred cCeEEccCCc------chHHHHHhcCCCeeecC
Q 038830 220 TGCFLTHCGW------NSTLEALSLGVPMVAMP 246 (335)
Q Consensus 220 v~~fItHgG~------nSv~Eal~~GVP~i~~P 246 (335)
.+++++|.|- +.+.+|...++|+|++-
T Consensus 64 ~gv~~~t~GpG~~N~~~~i~~A~~~~~Pll~i~ 96 (547)
T PRK08322 64 AGVCLSTLGPGATNLVTGVAYAQLGGMPMVAIT 96 (547)
T ss_pred CEEEEECCCccHhHHHHHHHHHhhcCCCEEEEe
Confidence 4458888874 58899999999999874
No 207
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=26.10 E-value=2.7e+02 Score=26.93 Aligned_cols=101 Identities=19% Similarity=0.185 Sum_probs=64.6
Q ss_pred EEEeecchhhhc-cccCcCeEEccC---Ccc-hHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCH
Q 038830 204 LVVNWCPQLGVL-AHEATGCFLTHC---GWN-STLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRR 278 (335)
Q Consensus 204 ~v~~w~pq~~vL-~h~~v~~fItHg---G~n-Sv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~ 278 (335)
.+.+-.+-...| .|.|+ +|||= |.| .-.|+++.|=|.|- |+.++.+ +|..-.. .+.
T Consensus 256 sfegR~~~p~fla~~tD~--VvSHqWeN~lNYlY~daLyggYPLVH---------NS~~l~d---~GYYY~~-----fD~ 316 (364)
T PF10933_consen 256 SFEGRFDFPDFLAQHTDA--VVSHQWENPLNYLYYDALYGGYPLVH---------NSPLLKD---VGYYYPD-----FDA 316 (364)
T ss_pred EEeeecChHHHHHhCCCE--EEeccccchhhHHHHHHHhcCCCccc---------Ccchhcc---cCcCCCC-----ccH
Confidence 344545554444 47777 99994 333 35799999999884 7777765 4777653 456
Q ss_pred HHHHHHHHHHHc--CCcHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 038830 279 EAIAHCISEILE--GKRDKEIKQNADKWRNFAKEAVAKGGSSDKNIDDFVANL 329 (335)
Q Consensus 279 ~~l~~~i~~ll~--~~~~~~~r~~a~~l~~~~~~a~~~ggss~~~l~~~v~~~ 329 (335)
.+=.+++.+.+. |..-+.|+++|+++=..+. + ....|++.+.+.|
T Consensus 317 ~~G~r~L~~A~~~HD~~~~~Y~~ra~~~l~~~~----p--~n~~nv~~y~~~L 363 (364)
T PF10933_consen 317 FEGARQLLRAIREHDADLDAYRARARRLLDRLS----P--ENPANVRAYEARL 363 (364)
T ss_pred HHHHHHHHHHHHHccccHHHHHHHHHHHHHhhC----C--CCHHHHHHHHHhh
Confidence 666666666663 3444789999988765542 2 2346666666554
No 208
>PRK13840 sucrose phosphorylase; Provisional
Probab=25.58 E-value=4.1e+02 Score=26.95 Aligned_cols=126 Identities=15% Similarity=0.187 Sum_probs=73.6
Q ss_pred hhhHHHHhhcCCCCcEEEEEeCC----------------cccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcC-----C
Q 038830 134 IESSMKWLNDRANGSVVYVSFGS----------------MATLKIEEMEELPCGLKASDKYFLWVVRESEQSKL-----P 192 (335)
Q Consensus 134 ~~~~~~wLd~~~~~svvyvsfGS----------------~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l-----~ 192 (335)
...+.+||...|.+.+-|+ .| .+-++.++++.+.+.+..-+..+.+...+.....+ -
T Consensus 269 ~~~L~~~l~~~p~~~~n~L--~~HDgIgl~d~~~~~~~~~gll~~~e~~~l~~~~~~~~~~~~~~~~~~~as~~~~Y~in 346 (495)
T PRK13840 269 VEALAHWLEIRPRNAVTVL--DTHDGIGIIDVGADDRGLAGLLPDEQIDNLVETIHANSHGESRQATGAAASNLDLYQVN 346 (495)
T ss_pred chHHHHHHHhCCCccEEee--ecCCCCCcccccccccccccCCCHHHHHHHHHHHHHhccCceeecCCcccccccchhhh
Confidence 4566789988776654343 32 13466778888888888877777777554321111 1
Q ss_pred ccchhhcCCceEEEeecchhhhccccCcCeEEccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCC
Q 038830 193 ENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADE 272 (335)
Q Consensus 193 ~~~~~~~~~~~~v~~w~pq~~vL~h~~v~~fItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~ 272 (335)
-++.+.+.++ .+.-+|+|+=. -..-|||+|...=.--+...-.++++. |.|..+++.
T Consensus 347 ~~~~~Al~~~-------d~r~lla~ai~--------------~~~~GiP~iY~~~ll~~~ND~~~~~~t-~~~R~inR~- 403 (495)
T PRK13840 347 CTYYDALGRN-------DQDYLAARAIQ--------------FFAPGIPQVYYVGLLAGPNDMELLART-NVGRDINRH- 403 (495)
T ss_pred ccHHHHhcCC-------cHHHHHHHHHH--------------HcCCCcceeeechhhccCccHHHHHhc-CCCcccCCC-
Confidence 1121111111 12233333222 234689999765443344444566676 999999877
Q ss_pred CCCcCHHHHHHHHH
Q 038830 273 KGIVRREAIAHCIS 286 (335)
Q Consensus 273 ~~~~~~~~l~~~i~ 286 (335)
..+.+++++.+.
T Consensus 404 --~~~~~~~~~~l~ 415 (495)
T PRK13840 404 --YYSTAEIDEALE 415 (495)
T ss_pred --CCCHHHHHHHHH
Confidence 688888888753
No 209
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=25.32 E-value=1.6e+02 Score=28.66 Aligned_cols=82 Identities=22% Similarity=0.076 Sum_probs=54.5
Q ss_pred cCCHHHHHHHHHHHhhCCCcEEEEEeCCCCC-----cCC-----ccchhhcCCce--EEEeecchh---hhccccCcCeE
Q 038830 159 TLKIEEMEELPCGLKASDKYFLWVVRESEQS-----KLP-----ENFSDETSQKG--LVVNWCPQL---GVLAHEATGCF 223 (335)
Q Consensus 159 ~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~-----~l~-----~~~~~~~~~~~--~v~~w~pq~---~vL~h~~v~~f 223 (335)
......+..+++++.+++.++...+..+... .+. .+-. ...++. .+.+|+||. .+|-.+++ =
T Consensus 191 ~Ye~~~l~~ll~~~~~~~~pv~llvp~g~~~~~~~~~~~~~~~~~g~~-~~~g~l~l~~lPF~~Q~~yD~LLw~cD~--N 267 (374)
T PF10093_consen 191 CYENAALASLLDAWAASPKPVHLLVPEGRALNSLAAWLGDALLQAGDS-WQRGNLTLHVLPFVPQDDYDRLLWACDF--N 267 (374)
T ss_pred eCCchHHHHHHHHHhcCCCCeEEEecCCccHHHHHHHhccccccCccc-cccCCeEEEECCCCCHHHHHHHHHhCcc--c
Confidence 3455668899999999888887766543211 111 0000 012333 445899998 78999998 3
Q ss_pred EccCCcchHHHHHhcCCCeee
Q 038830 224 LTHCGWNSTLEALSLGVPMVA 244 (335)
Q Consensus 224 ItHgG~nSv~Eal~~GVP~i~ 244 (335)
+-+ |==|..-|..+|+|+|=
T Consensus 268 fVR-GEDSfVRAqwAgkPFvW 287 (374)
T PF10093_consen 268 FVR-GEDSFVRAQWAGKPFVW 287 (374)
T ss_pred eEe-cchHHHHHHHhCCCceE
Confidence 334 56799999999999993
No 210
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=25.26 E-value=1.2e+02 Score=28.56 Aligned_cols=55 Identities=16% Similarity=0.248 Sum_probs=41.3
Q ss_pred cccCcCeEEccCCcchHHHHHh----cCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcC
Q 038830 216 AHEATGCFLTHCGWNSTLEALS----LGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEG 291 (335)
Q Consensus 216 ~h~~v~~fItHgG~nSv~Eal~----~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 291 (335)
..+++ +|+=||=||++.+.. .++|++++.+. .+|... .+..+++.+++.+++++
T Consensus 71 ~~~D~--vi~lGGDGT~L~aar~~~~~~~PilGIN~G--------------~lGFL~------~~~~~~~~~~l~~i~~g 128 (306)
T PRK03372 71 DGCEL--VLVLGGDGTILRAAELARAADVPVLGVNLG--------------HVGFLA------EAEAEDLDEAVERVVDR 128 (306)
T ss_pred cCCCE--EEEEcCCHHHHHHHHHhccCCCcEEEEecC--------------CCceec------cCCHHHHHHHHHHHHcC
Confidence 45666 999999999999875 48899988541 234443 35688899999999876
Q ss_pred C
Q 038830 292 K 292 (335)
Q Consensus 292 ~ 292 (335)
+
T Consensus 129 ~ 129 (306)
T PRK03372 129 D 129 (306)
T ss_pred C
Confidence 5
No 211
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=25.19 E-value=1.3e+02 Score=28.16 Aligned_cols=55 Identities=15% Similarity=0.227 Sum_probs=39.8
Q ss_pred cccCcCeEEccCCcchHHHHHh----cCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcC
Q 038830 216 AHEATGCFLTHCGWNSTLEALS----LGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEG 291 (335)
Q Consensus 216 ~h~~v~~fItHgG~nSv~Eal~----~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 291 (335)
..+++ +|+=||=||++.++. .++|++++-+. .+|..- .++.+++.+++++++++
T Consensus 62 ~~~d~--vi~lGGDGT~L~aa~~~~~~~~Pilgin~G--------------~lGFl~------~~~~~~~~~~l~~i~~g 119 (292)
T PRK03378 62 QQADL--AIVVGGDGNMLGAARVLARYDIKVIGINRG--------------NLGFLT------DLDPDNALQQLSDVLEG 119 (292)
T ss_pred CCCCE--EEEECCcHHHHHHHHHhcCCCCeEEEEECC--------------CCCccc------ccCHHHHHHHHHHHHcC
Confidence 35666 999999999999974 37888876431 123322 35688999999999876
Q ss_pred C
Q 038830 292 K 292 (335)
Q Consensus 292 ~ 292 (335)
+
T Consensus 120 ~ 120 (292)
T PRK03378 120 H 120 (292)
T ss_pred C
Confidence 5
No 212
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=25.09 E-value=62 Score=33.51 Aligned_cols=96 Identities=15% Similarity=0.189 Sum_probs=48.9
Q ss_pred chhhhccccCcCeEEccCC-c-chHHHHHhcCCCeeecCCCC-ChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHH
Q 038830 210 PQLGVLAHEATGCFLTHCG-W-NSTLEALSLGVPMVAMPLWT-DQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCIS 286 (335)
Q Consensus 210 pq~~vL~h~~v~~fItHgG-~-nSv~Eal~~GVP~i~~P~~~-DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~ 286 (335)
+..+++.-+++|.|-|-== | -|-+||+++|||.|+-=+.+ -++.+-..-... --|+.|-... .-+.++..+.+.
T Consensus 462 ~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~-~~GV~VvdR~--~~n~~e~v~~la 538 (633)
T PF05693_consen 462 DYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPE-EYGVYVVDRR--DKNYDESVNQLA 538 (633)
T ss_dssp -HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHG-GGTEEEE-SS--SS-HHHHHHHHH
T ss_pred CHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCc-CCcEEEEeCC--CCCHHHHHHHHH
Confidence 3447778888877776321 3 38899999999999876632 222221111111 2244442211 245666666666
Q ss_pred HHH----cCC--cHHHHHHHHHHHHHHH
Q 038830 287 EIL----EGK--RDKEIKQNADKWRNFA 308 (335)
Q Consensus 287 ~ll----~~~--~~~~~r~~a~~l~~~~ 308 (335)
+.| .-. +...+|+++++|++.+
T Consensus 539 ~~l~~f~~~~~rqri~~Rn~ae~LS~~~ 566 (633)
T PF05693_consen 539 DFLYKFCQLSRRQRIIQRNRAERLSDLA 566 (633)
T ss_dssp HHHHHHHT--HHHHHHHHHHHHHHGGGG
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 555 222 2245777887777653
No 213
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=24.92 E-value=2e+02 Score=21.40 Aligned_cols=26 Identities=19% Similarity=0.199 Sum_probs=19.3
Q ss_pred EEEEEeCCccc-CCHHHHHHHHHHHhh
Q 038830 149 VVYVSFGSMAT-LKIEEMEELPCGLKA 174 (335)
Q Consensus 149 vvyvsfGS~~~-~~~~~~~~l~~~l~~ 174 (335)
+|+++.||... .....+..+++.+++
T Consensus 2 lllv~HGs~~~s~~~~~~~~~~~~l~~ 28 (101)
T cd03409 2 LLVVGHGSPYKDPYKKDIEAQAHNLAE 28 (101)
T ss_pred EEEEECCCCCCccHHHHHHHHHHHHHH
Confidence 78999999865 445567778887765
No 214
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=24.66 E-value=1.9e+02 Score=24.54 Aligned_cols=56 Identities=9% Similarity=0.230 Sum_probs=37.8
Q ss_pred cCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcC-CcHHHHHHHHHHHHHHHHHH
Q 038830 245 MPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEG-KRDKEIKQNADKWRNFAKEA 311 (335)
Q Consensus 245 ~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~r~~a~~l~~~~~~a 311 (335)
.|+.-.+-.+|+-+.+. --.+.. -.++.|.+.+.+++.+ + +-+-.+.++++.+.++
T Consensus 78 yPWt~~~L~aa~el~ee---~eeLs~-----deke~~~~sl~dL~~d~P---kT~vA~~rfKk~~~K~ 134 (158)
T PF10083_consen 78 YPWTENALEAANELIEE---DEELSP-----DEKEQFKESLPDLTKDTP---KTKVAATRFKKILSKA 134 (158)
T ss_pred CchHHHHHHHHHHHHHH---hhcCCH-----HHHHHHHhhhHHHhhcCC---ccHHHHHHHHHHHHHH
Confidence 46666677778777765 223332 2577899999999854 5 5666777788777665
No 215
>PRK11380 hypothetical protein; Provisional
Probab=24.64 E-value=2.8e+02 Score=26.67 Aligned_cols=68 Identities=19% Similarity=0.289 Sum_probs=41.5
Q ss_pred hhhhccccCcCeEEccCCcchHHHH------------HhcCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCH
Q 038830 211 QLGVLAHEATGCFLTHCGWNSTLEA------------LSLGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRR 278 (335)
Q Consensus 211 q~~vL~h~~v~~fItHgG~nSv~Ea------------l~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~ 278 (335)
|...|.-.+|- -..||||+.++|- -+++.|++..++ -+... ..+.+.||| .++
T Consensus 117 q~r~L~L~aVy-a~~~g~~~etLet~p~~~~~g~~~~~~~~lp~~~~~i-~~er~--~~L~~~WGI-----------~dr 181 (353)
T PRK11380 117 KRQALQLIAVY-RFYHGQWSETLEFWPRKPRPGKDTFQYHVLPFDSIDI-ISKRR--ESLEDDWGI-----------EDS 181 (353)
T ss_pred HHHHHHHhhHH-HHHhhhhhhhhhccccccccccccccccccccccccc-hhhhH--HHHHhccCC-----------CCH
Confidence 33444444442 2567888888887 456777777665 22222 344555543 378
Q ss_pred HHHHHHHHHHHcCCc
Q 038830 279 EAIAHCISEILEGKR 293 (335)
Q Consensus 279 ~~l~~~i~~ll~~~~ 293 (335)
|+..+.|..+.++.-
T Consensus 182 Esai~tL~~L~~~GH 196 (353)
T PRK11380 182 EGYCALMEHLLSGDH 196 (353)
T ss_pred HHHHHHHHHHHhCCc
Confidence 888899988887664
No 216
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=24.59 E-value=1.2e+02 Score=30.97 Aligned_cols=29 Identities=14% Similarity=0.200 Sum_probs=24.1
Q ss_pred ccCcCeEEccCCcchHHHHHhcCCCeeecCCC
Q 038830 217 HEATGCFLTHCGWNSTLEALSLGVPMVAMPLW 248 (335)
Q Consensus 217 h~~v~~fItHgG~nSv~Eal~~GVP~i~~P~~ 248 (335)
++++ +|+.||-...+.. ...+|+|-++..
T Consensus 64 ~~dv--iIsrG~ta~~i~~-~~~iPVv~i~~s 92 (538)
T PRK15424 64 RCDA--IIAAGSNGAYLKS-RLSVPVILIKPS 92 (538)
T ss_pred CCcE--EEECchHHHHHHh-hCCCCEEEecCC
Confidence 4566 9999999998887 457999999984
No 217
>PLN02929 NADH kinase
Probab=24.41 E-value=93 Score=29.35 Aligned_cols=97 Identities=12% Similarity=0.114 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchhhhccccCcCeEEccCCcchHHHHHh---c
Q 038830 162 IEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTLEALS---L 238 (335)
Q Consensus 162 ~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~v~~fItHgG~nSv~Eal~---~ 238 (335)
.+.+..+.+-|.+.|..+.-+.+.. + ......+++ +|+-||=||++-+.. .
T Consensus 33 ~~~~~~~~~~L~~~gi~~~~v~r~~----~--------------------~~~~~~~Dl--vi~lGGDGT~L~aa~~~~~ 86 (301)
T PLN02929 33 KDTVNFCKDILQQKSVDWECVLRNE----L--------------------SQPIRDVDL--VVAVGGDGTLLQASHFLDD 86 (301)
T ss_pred HHHHHHHHHHHHHcCCEEEEeeccc----c--------------------ccccCCCCE--EEEECCcHHHHHHHHHcCC
Confidence 4556677777877777653222111 1 011234566 999999999999854 4
Q ss_pred CCCeeecCCCC------ChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 239 GVPMVAMPLWT------DQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 239 GVP~i~~P~~~------DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
++|++++-..- .+++|.-- +.. ..|... .++.+++.+++.++++++
T Consensus 87 ~iPvlGIN~Gp~~~~~~~~~~~~~~-~~r-~lGfL~------~~~~~~~~~~L~~il~g~ 138 (301)
T PLN02929 87 SIPVLGVNSDPTQKDEVEEYSDEFD-ARR-STGHLC------AATAEDFEQVLDDVLFGR 138 (301)
T ss_pred CCcEEEEECCCcccccccccccccc-ccc-Cccccc------cCCHHHHHHHHHHHHcCC
Confidence 78998875531 12333311 111 244433 367899999999999774
No 218
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=24.32 E-value=2.8e+02 Score=27.06 Aligned_cols=61 Identities=13% Similarity=0.096 Sum_probs=37.0
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchhhhccccCcCeEEc
Q 038830 146 NGSVVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLT 225 (335)
Q Consensus 146 ~~svvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~v~~fIt 225 (335)
.+.|-.|.+|.++. .+++.+...|.+++-. .+.. .+ .+ ....+.+..++|+.+++ ++-
T Consensus 116 gktvGIIG~G~IG~-------~vA~~l~a~G~~V~~~-dp~~----~~------~~--~~~~~~~L~ell~~sDi--I~l 173 (378)
T PRK15438 116 DRTVGIVGVGNVGR-------RLQARLEALGIKTLLC-DPPR----AD------RG--DEGDFRSLDELVQEADI--LTF 173 (378)
T ss_pred CCEEEEECcCHHHH-------HHHHHHHHCCCEEEEE-CCcc----cc------cc--cccccCCHHHHHhhCCE--EEE
Confidence 45677888988884 4555566668887632 2110 00 00 01235667788999998 777
Q ss_pred cCC
Q 038830 226 HCG 228 (335)
Q Consensus 226 HgG 228 (335)
|+-
T Consensus 174 h~P 176 (378)
T PRK15438 174 HTP 176 (378)
T ss_pred eCC
Confidence 763
No 219
>PRK08199 thiamine pyrophosphate protein; Validated
Probab=24.06 E-value=2e+02 Score=29.32 Aligned_cols=26 Identities=19% Similarity=0.231 Sum_probs=21.4
Q ss_pred cCeEEccCCc------chHHHHHhcCCCeeec
Q 038830 220 TGCFLTHCGW------NSTLEALSLGVPMVAM 245 (335)
Q Consensus 220 v~~fItHgG~------nSv~Eal~~GVP~i~~ 245 (335)
.++.++|.|- +.+.+|...++|+|++
T Consensus 72 ~gv~~~t~GpG~~N~~~gi~~A~~~~~Pvl~i 103 (557)
T PRK08199 72 PGICFVTRGPGATNASIGVHTAFQDSTPMILF 103 (557)
T ss_pred CEEEEeCCCccHHHHHHHHHHHhhcCCCEEEE
Confidence 4458999884 4788999999999977
No 220
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated
Probab=23.74 E-value=3.2e+02 Score=28.11 Aligned_cols=28 Identities=18% Similarity=0.206 Sum_probs=22.3
Q ss_pred CcCeEEccCCc------chHHHHHhcCCCeeecC
Q 038830 219 ATGCFLTHCGW------NSTLEALSLGVPMVAMP 246 (335)
Q Consensus 219 ~v~~fItHgG~------nSv~Eal~~GVP~i~~P 246 (335)
..+++++|.|- +.+.+|...++|+|++.
T Consensus 68 ~~gv~~~t~GPG~~n~~~gi~~A~~~~~Pvl~I~ 101 (588)
T PRK07525 68 RMGMVIGQNGPGITNFVTAVATAYWAHTPVVLVT 101 (588)
T ss_pred CCEEEEEcCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 34558999884 47788999999999885
No 221
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=23.34 E-value=1.3e+02 Score=30.87 Aligned_cols=27 Identities=19% Similarity=0.341 Sum_probs=21.8
Q ss_pred cCeEEccCC------cchHHHHHhcCCCeeecC
Q 038830 220 TGCFLTHCG------WNSTLEALSLGVPMVAMP 246 (335)
Q Consensus 220 v~~fItHgG------~nSv~Eal~~GVP~i~~P 246 (335)
.++.++|.| .+.+.+|.+.++|+|.+-
T Consensus 64 ~gv~~~t~GPG~~n~l~~i~~A~~~~~Pvl~I~ 96 (586)
T PRK06276 64 VGVCVATSGPGATNLVTGIATAYADSSPVIALT 96 (586)
T ss_pred CEEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 444888877 458899999999999873
No 222
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=23.28 E-value=1.3e+02 Score=28.27 Aligned_cols=55 Identities=20% Similarity=0.251 Sum_probs=40.8
Q ss_pred cccCcCeEEccCCcchHHHHHh----cCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcC
Q 038830 216 AHEATGCFLTHCGWNSTLEALS----LGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEG 291 (335)
Q Consensus 216 ~h~~v~~fItHgG~nSv~Eal~----~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 291 (335)
..+++ +|+=||=||++.+.. .++|++++-.. .+|... .++.+++.+++.+++++
T Consensus 67 ~~~D~--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL~------~~~~~~~~~~l~~i~~g 124 (296)
T PRK04539 67 QYCDL--VAVLGGDGTFLSVAREIAPRAVPIIGINQG--------------HLGFLT------QIPREYMTDKLLPVLEG 124 (296)
T ss_pred cCCCE--EEEECCcHHHHHHHHHhcccCCCEEEEecC--------------CCeEee------ccCHHHHHHHHHHHHcC
Confidence 35677 999999999999964 47898887421 234433 36788899999999876
Q ss_pred C
Q 038830 292 K 292 (335)
Q Consensus 292 ~ 292 (335)
+
T Consensus 125 ~ 125 (296)
T PRK04539 125 K 125 (296)
T ss_pred C
Confidence 4
No 223
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=23.18 E-value=2.9e+02 Score=26.38 Aligned_cols=25 Identities=12% Similarity=0.198 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEeCC
Q 038830 162 IEEMEELPCGLKASDKYFLWVVRES 186 (335)
Q Consensus 162 ~~~~~~l~~~l~~~~~~flw~~~~~ 186 (335)
+.|+..++++|.+.|+.+...+...
T Consensus 10 p~~~~~la~~L~~~G~~v~~~~~~~ 34 (396)
T cd03818 10 PGQFRHLAPALAAQGHEVVFLTEPN 34 (396)
T ss_pred chhHHHHHHHHHHCCCEEEEEecCC
Confidence 4678899999999999876665543
No 224
>PF08006 DUF1700: Protein of unknown function (DUF1700); InterPro: IPR012963 This family contains many hypothetical bacterial proteins and two putative membrane proteins (Q6GFD0 from SWISSPROT and Q6G806 from SWISSPROT).
Probab=22.93 E-value=3.1e+02 Score=23.32 Aligned_cols=39 Identities=10% Similarity=0.253 Sum_probs=15.9
Q ss_pred CHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcC
Q 038830 277 RREAIAHCISEILEGKRDKEIKQNADKWRNFAKEAVAKG 315 (335)
Q Consensus 277 ~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~g 315 (335)
|+++.-+.+++-+.+=..++.++.....++-+.++.++|
T Consensus 2 ~k~efL~~L~~~L~~lp~~e~~e~l~~Y~e~f~d~~~~G 40 (181)
T PF08006_consen 2 NKNEFLNELEKYLKKLPEEEREEILEYYEEYFDDAGEEG 40 (181)
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhCC
Confidence 344444444444432111234444444444444444443
No 225
>PLN02928 oxidoreductase family protein
Probab=22.16 E-value=2.5e+02 Score=26.94 Aligned_cols=113 Identities=15% Similarity=0.225 Sum_probs=57.2
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCc-----CCccchhhcCCceEEEeecchhhhccccCc
Q 038830 146 NGSVVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQSK-----LPENFSDETSQKGLVVNWCPQLGVLAHEAT 220 (335)
Q Consensus 146 ~~svvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~-----l~~~~~~~~~~~~~v~~w~pq~~vL~h~~v 220 (335)
.+.+..|.+|+++. ++++.+...|.+++..-+...... ++.......... ...+....++|+.+|+
T Consensus 159 gktvGIiG~G~IG~-------~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~L~ell~~aDi 229 (347)
T PLN02928 159 GKTVFILGYGAIGI-------ELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDE--KGGHEDIYEFAGEADI 229 (347)
T ss_pred CCEEEEECCCHHHH-------HHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccc--cCcccCHHHHHhhCCE
Confidence 35678899998884 566666667888765422210000 000000000000 1134455689999999
Q ss_pred CeEEccCCcchHHHHHhcCCCeeecCCCCChhhhHHHHHHHhccc-eeecCCCCCCcCHHHHHHHHH
Q 038830 221 GCFLTHCGWNSTLEALSLGVPMVAMPLWTDQSTNSKYVMDVWKMG-LKVPADEKGIVRREAIAHCIS 286 (335)
Q Consensus 221 ~~fItHgG~nSv~Eal~~GVP~i~~P~~~DQ~~Na~~v~~~~g~G-~~l~~~~~~~~~~~~l~~~i~ 286 (335)
++.|+-.+.-. ....|+..+... +=| +.++....+.++.+.|.++++
T Consensus 230 --Vvl~lPlt~~T----------------~~li~~~~l~~M-k~ga~lINvaRG~lVde~AL~~AL~ 277 (347)
T PLN02928 230 --VVLCCTLTKET----------------AGIVNDEFLSSM-KKGALLVNIARGGLLDYDAVLAALE 277 (347)
T ss_pred --EEECCCCChHh----------------hcccCHHHHhcC-CCCeEEEECCCccccCHHHHHHHHH
Confidence 99988654322 223455555444 322 333333223556666665554
No 226
>KOG2635 consensus Medium subunit of clathrin adaptor complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.07 E-value=1.1e+02 Score=30.23 Aligned_cols=25 Identities=36% Similarity=0.516 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCChH
Q 038830 294 DKEIKQNADKWRNFAKEAVAKGGSS 318 (335)
Q Consensus 294 ~~~~r~~a~~l~~~~~~a~~~ggss 318 (335)
.++||++|++|++.=+++.++||+.
T Consensus 156 ~q~mkrKaKElqr~r~ea~rrgg~~ 180 (512)
T KOG2635|consen 156 KQEMKRKAKELQRARKEAERRGGSL 180 (512)
T ss_pred HHHHHHHHHHHHHHHHhhhcccccc
Confidence 3679999999988888888888644
No 227
>PLN03139 formate dehydrogenase; Provisional
Probab=22.06 E-value=3.2e+02 Score=26.66 Aligned_cols=70 Identities=14% Similarity=0.139 Sum_probs=40.2
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeec-chhhhccccCcCeEE
Q 038830 146 NGSVVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWC-PQLGVLAHEATGCFL 224 (335)
Q Consensus 146 ~~svvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~-pq~~vL~h~~v~~fI 224 (335)
.+.|-.|.+|.++. .+++.|...|.+++. +.... .+....+. .+ +.+. .-.++++.+++ ++
T Consensus 199 gktVGIVG~G~IG~-------~vA~~L~afG~~V~~-~d~~~---~~~~~~~~---~g--~~~~~~l~ell~~sDv--V~ 260 (386)
T PLN03139 199 GKTVGTVGAGRIGR-------LLLQRLKPFNCNLLY-HDRLK---MDPELEKE---TG--AKFEEDLDAMLPKCDV--VV 260 (386)
T ss_pred CCEEEEEeecHHHH-------HHHHHHHHCCCEEEE-ECCCC---cchhhHhh---cC--ceecCCHHHHHhhCCE--EE
Confidence 45688899998884 566666667888754 33221 11111110 01 1222 45588899999 88
Q ss_pred ccCCcchHH
Q 038830 225 THCGWNSTL 233 (335)
Q Consensus 225 tHgG~nSv~ 233 (335)
.||-.+.-.
T Consensus 261 l~lPlt~~T 269 (386)
T PLN03139 261 INTPLTEKT 269 (386)
T ss_pred EeCCCCHHH
Confidence 888654433
No 228
>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This represents the N-terminal TPP binding domain of TPP enzymes.; GO: 0030976 thiamine pyrophosphate binding; PDB: 3HWX_1 3FLM_B 3HWW_A 2JLC_A 2JLA_A 2VBG_A 2VBF_B 2Q29_A 2Q27_B 2Q28_B ....
Probab=21.87 E-value=70 Score=27.01 Aligned_cols=27 Identities=15% Similarity=0.315 Sum_probs=20.0
Q ss_pred CeEEccCC------cchHHHHHhcCCCeeecCC
Q 038830 221 GCFLTHCG------WNSTLEALSLGVPMVAMPL 247 (335)
Q Consensus 221 ~~fItHgG------~nSv~Eal~~GVP~i~~P~ 247 (335)
+.+++|.| .+++.+|...++|+|.+.-
T Consensus 66 ~v~~~~~GpG~~n~~~~l~~A~~~~~Pvl~i~g 98 (172)
T PF02776_consen 66 GVVIVTSGPGATNALTGLANAYADRIPVLVITG 98 (172)
T ss_dssp EEEEEETTHHHHTTHHHHHHHHHTT-EEEEEEE
T ss_pred eEEEeecccchHHHHHHHhhcccceeeEEEEec
Confidence 33888887 4578889999999997653
No 229
>TIGR03164 UHCUDC OHCU decarboxylase. Previously thought to only proceed spontaneously, the decarboxylation of 2-oxo-4-hydroxy-4-carboxy--5-ureidoimidazoline (OHCU) has been recently been shown to be catalyzed by this enzyme in Mus musculus. Homologs of this enzyme are found adjacent to and fused with uricase in a number of prokaryotes and are represented by this model.
Probab=21.66 E-value=3.9e+02 Score=22.47 Aligned_cols=92 Identities=17% Similarity=0.191 Sum_probs=55.7
Q ss_pred hccccCcCeEEccCC---cchHHHHHhcCCCeeecCCC-CChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHH
Q 038830 214 VLAHEATGCFLTHCG---WNSTLEALSLGVPMVAMPLW-TDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEIL 289 (335)
Q Consensus 214 vL~h~~v~~fItHgG---~nSv~Eal~~GVP~i~~P~~-~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll 289 (335)
+-.||++|.-..-.| .-|..|--.+|+-.+.--.. .=+..|..|-++- |.-..+.-. .-++++|...+++=|
T Consensus 56 l~~HP~Lg~~~~~~~~ls~~S~~EQ~~agl~~~~~~~~~~L~~lN~~Y~~kF-GfpFvi~v~---g~~~~~Il~~l~~Rl 131 (157)
T TIGR03164 56 IRAHPDLAGKLAVAGELTAESTSEQASAGLDQLSQEEFARFTRLNNAYRARF-GFPFIMAVK---GKTKQSILAAFEARL 131 (157)
T ss_pred HHhCCcccccccccccchHhhHHHHHhccccCCCHHHHHHHHHHHHHHHHHC-CCeeEEeeC---CCCHHHHHHHHHHHH
Confidence 445888866442211 12444554455433210000 0145688888877 766666533 248899999999888
Q ss_pred cCCcHHHHHHHHHHHHHHHH
Q 038830 290 EGKRDKEIKQNADKWRNFAK 309 (335)
Q Consensus 290 ~~~~~~~~r~~a~~l~~~~~ 309 (335)
+|+...+.+..+.++.+.++
T Consensus 132 ~n~~~~E~~~a~~Ev~kIa~ 151 (157)
T TIGR03164 132 NNDRETEFARALREIERIAR 151 (157)
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 87656678888888877665
No 230
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=21.51 E-value=4.4e+02 Score=23.68 Aligned_cols=37 Identities=8% Similarity=0.012 Sum_probs=29.6
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEE
Q 038830 146 NGSVVYVSFGSMATLKIEEMEELPCGLKASDKYFLWV 182 (335)
Q Consensus 146 ~~svvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~ 182 (335)
.++|.||-+-|.......-+++..++|+..|..+.-.
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L 68 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSEL 68 (224)
T ss_pred CceEEEEecCccccchHHHHHHHHHHHHHcCCeeeee
Confidence 4589999998888766667888999999999876543
No 231
>PF06204 CBM_X: Putative carbohydrate binding domain ; InterPro: IPR009342 This domain is conserved in enzymes that have carbohydrates as substrate, and may be a carbohydrate-binding domain.; PDB: 3ACT_B 2CQT_A 3QFY_B 3QFZ_A 2CQS_A 3QG0_B 3AFJ_A 3ACS_A 1V7V_A 1V7X_A ....
Probab=21.33 E-value=43 Score=24.00 Aligned_cols=23 Identities=26% Similarity=0.410 Sum_probs=17.9
Q ss_pred ecchhhhccccCcCeEEccCCcc
Q 038830 208 WCPQLGVLAHEATGCFLTHCGWN 230 (335)
Q Consensus 208 w~pq~~vL~h~~v~~fItHgG~n 230 (335)
-.|+..+|+..+.+.+||+.|.+
T Consensus 24 p~P~~n~LsNg~y~~mvt~~G~G 46 (66)
T PF06204_consen 24 PAPWVNVLSNGSYGVMVTNSGSG 46 (66)
T ss_dssp SS--EEEE-SSSEEEEEETTSBE
T ss_pred CCCEEEEeeCCcEEEEEcCCCce
Confidence 46788999999999999999976
No 232
>PLN02859 glutamine-tRNA ligase
Probab=21.01 E-value=1.7e+02 Score=31.44 Aligned_cols=49 Identities=16% Similarity=0.321 Sum_probs=32.9
Q ss_pred hHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCCc----HHHHHHHHHHHHHHHHHH
Q 038830 254 NSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGKR----DKEIKQNADKWRNFAKEA 311 (335)
Q Consensus 254 Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~----~~~~r~~a~~l~~~~~~a 311 (335)
.+.+-++. |+|+.+ |+|+|.++|.++++..+ .+.|+.|...+-..+|+.
T Consensus 106 ~~~Fek~C-GVGV~V--------T~EqI~~~V~~~i~~~k~~il~~RY~~n~g~ll~~~r~~ 158 (788)
T PLN02859 106 LNKFEEAC-GVGVVV--------SPEDIEAAVNEVFEENKEKILEQRYRTNVGDLLGQVRKR 158 (788)
T ss_pred HHHHHHhC-CCCEEE--------CHHHHHHHHHHHHHhhHHHHHHhcccccHHHHHHHHHhh
Confidence 34444445 888766 89999999999996432 135666666666666654
No 233
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=20.95 E-value=7.6e+02 Score=23.83 Aligned_cols=127 Identities=17% Similarity=0.094 Sum_probs=65.2
Q ss_pred EEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchh-hhccccCcCeEEccCC
Q 038830 150 VYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQL-GVLAHEATGCFLTHCG 228 (335)
Q Consensus 150 vyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~-~vL~h~~v~~fItHgG 228 (335)
+++. |....-+.+++.+++..+...+..|+-...... ..-|.+| ++.-..|.... .+...-.+..+-+=..
T Consensus 120 ~~ia-Gpc~iE~~~~~~~~A~~lk~~g~~~~r~~~~kp-Rtsp~~f------~g~~~e~l~~L~~~~~~~Gl~~~t~v~d 191 (360)
T PRK12595 120 SFIF-GPCSVESYEQVEAVAKALKAKGLKLLRGGAFKP-RTSPYDF------QGLGVEGLKILKQVADEYGLAVISEIVN 191 (360)
T ss_pred eeEE-ecccccCHHHHHHHHHHHHHcCCcEEEccccCC-CCCCccc------cCCCHHHHHHHHHHHHHcCCCEEEeeCC
Confidence 3444 665556788999999999999988764321110 0011112 11111222222 3334444444444445
Q ss_pred cchHHHHHhcCCCeeecCCCC-ChhhhHHHHHHHhccceeecCCCCCC-cCHHHHHHHHHHHH
Q 038830 229 WNSTLEALSLGVPMVAMPLWT-DQSTNSKYVMDVWKMGLKVPADEKGI-VRREAIAHCISEIL 289 (335)
Q Consensus 229 ~nSv~Eal~~GVP~i~~P~~~-DQ~~Na~~v~~~~g~G~~l~~~~~~~-~~~~~l~~~i~~ll 289 (335)
..++-++... ++++-+|-+. .|+.=.+.+... |.=+.+..+ . .+-+++..++..+.
T Consensus 192 ~~~~~~l~~~-vd~lkI~s~~~~n~~LL~~~a~~-gkPVilk~G---~~~t~~e~~~Ave~i~ 249 (360)
T PRK12595 192 PADVEVALDY-VDVIQIGARNMQNFELLKAAGRV-NKPVLLKRG---LSATIEEFIYAAEYIM 249 (360)
T ss_pred HHHHHHHHHh-CCeEEECcccccCHHHHHHHHcc-CCcEEEeCC---CCCCHHHHHHHHHHHH
Confidence 5555555556 7777777432 222222223322 333444433 3 57888888887776
No 234
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=20.93 E-value=4e+02 Score=24.80 Aligned_cols=93 Identities=11% Similarity=-0.049 Sum_probs=50.7
Q ss_pred hhHHHHhhcCCCCcEEEEEeCCcccCCHHHHHHHHHHHhhCCCcEEEEEeCCCCCcCCccchhhcCCceEEEeecchhhh
Q 038830 135 ESSMKWLNDRANGSVVYVSFGSMATLKIEEMEELPCGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGV 214 (335)
Q Consensus 135 ~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~l~~~l~~~~~~flw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~v 214 (335)
.++..+.....-..+..-........+...+..+.+++++.|.++++-++.+... -... ......+.=..-.
T Consensus 116 ~E~er~v~~~gf~g~~l~p~~~~~~~~~~~~~pi~~~a~~~gvpv~ihtG~~~~~---~~~~-----~~~~~p~~~~~va 187 (293)
T COG2159 116 EELERRVRELGFVGVKLHPVAQGFYPDDPRLYPIYEAAEELGVPVVIHTGAGPGG---AGLE-----KGHSDPLYLDDVA 187 (293)
T ss_pred HHHHHHHHhcCceEEEecccccCCCCCChHHHHHHHHHHHcCCCEEEEeCCCCCC---cccc-----cCCCCchHHHHHH
Confidence 4455555543333333333333334455567889999999999999866543111 1000 0000111112244
Q ss_pred ccccCcCeEEccCC--cchHHHH
Q 038830 215 LAHEATGCFLTHCG--WNSTLEA 235 (335)
Q Consensus 215 L~h~~v~~fItHgG--~nSv~Ea 235 (335)
-.+|+++-++.|+| ..=..|+
T Consensus 188 ~~fP~l~IVl~H~G~~~p~~~~a 210 (293)
T COG2159 188 RKFPELKIVLGHMGEDYPWELEA 210 (293)
T ss_pred HHCCCCcEEEEecCCCCchhHHH
Confidence 56789999999999 5555555
No 235
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=20.86 E-value=1.9e+02 Score=26.76 Aligned_cols=54 Identities=15% Similarity=0.342 Sum_probs=39.1
Q ss_pred ccCcCeEEccCCcchHHHHHh-cCCCeeecCCCCChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHcCC
Q 038830 217 HEATGCFLTHCGWNSTLEALS-LGVPMVAMPLWTDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILEGK 292 (335)
Q Consensus 217 h~~v~~fItHgG~nSv~Eal~-~GVP~i~~P~~~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 292 (335)
.+++ +|+=||=||++.+.. ...|++++-. - .+|... .++.+++.++++++++++
T Consensus 52 ~~D~--vi~lGGDGT~L~a~~~~~~PilGIN~-------------G-~lGFL~------~~~~~~~~~~l~~i~~g~ 106 (271)
T PRK01185 52 NADV--IITIGGDGTILRTLQRAKGPILGINM-------------G-GLGFLT------EIEIDEVGSAIKKLIRGE 106 (271)
T ss_pred CCCE--EEEEcCcHHHHHHHHHcCCCEEEEEC-------------C-CCccCc------ccCHHHHHHHHHHHHcCC
Confidence 4566 999999999999987 4567776632 1 223332 367899999999999765
No 236
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated
Probab=20.52 E-value=1.2e+02 Score=30.92 Aligned_cols=27 Identities=19% Similarity=0.313 Sum_probs=22.0
Q ss_pred cCeEEccCC------cchHHHHHhcCCCeeecC
Q 038830 220 TGCFLTHCG------WNSTLEALSLGVPMVAMP 246 (335)
Q Consensus 220 v~~fItHgG------~nSv~Eal~~GVP~i~~P 246 (335)
.+++++|+| .+.+.+|...++|||++-
T Consensus 67 ~gv~~~t~GpG~~n~~~gla~A~~~~~Pvl~i~ 99 (563)
T PRK08527 67 VGVAIVTSGPGFTNAVTGLATAYMDSIPLVLIS 99 (563)
T ss_pred CEEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 445888888 458899999999999873
No 237
>COG1609 PurR Transcriptional regulators [Transcription]
Probab=20.42 E-value=5.2e+02 Score=24.34 Aligned_cols=49 Identities=12% Similarity=0.217 Sum_probs=31.0
Q ss_pred hHHHHhhcCCCCcEEEEEeCCcccCCHHHHHHHHHHHhhCCCcE--EEEEe
Q 038830 136 SSMKWLNDRANGSVVYVSFGSMATLKIEEMEELPCGLKASDKYF--LWVVR 184 (335)
Q Consensus 136 ~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~l~~~l~~~~~~f--lw~~~ 184 (335)
...+.|-++..+.+.|++.+.......+.++.+.+++++.+..+ .|+..
T Consensus 165 ~a~~~L~~~G~~~i~~i~~~~~~~~~~~R~~Gf~~al~~~~~~~~~~~i~~ 215 (333)
T COG1609 165 LATEHLIELGHRRIAFIGGPLDSSASRERLEGYRAALREAGLPINPEWIVE 215 (333)
T ss_pred HHHHHHHHCCCceEEEEeCCCccccHhHHHHHHHHHHHHCCCCCCcceEEe
Confidence 34456666566778888777633334556777888888777664 45443
No 238
>PRK13798 putative OHCU decarboxylase; Provisional
Probab=20.30 E-value=4.2e+02 Score=22.55 Aligned_cols=88 Identities=14% Similarity=0.090 Sum_probs=54.9
Q ss_pred hhccccCcCeEEccCCcchHHHHHhcCCCeeecCCC--CChhhhHHHHHHHhccceeecCCCCCCcCHHHHHHHHHHHHc
Q 038830 213 GVLAHEATGCFLTHCGWNSTLEALSLGVPMVAMPLW--TDQSTNSKYVMDVWKMGLKVPADEKGIVRREAIAHCISEILE 290 (335)
Q Consensus 213 ~vL~h~~v~~fItHgG~nSv~Eal~~GVP~i~~P~~--~DQ~~Na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~ 290 (335)
.|-.||++|.-. .+-+|..|.- |+=.+. +-- .=+..|++|-++- |.=..+.-. .-++++|...+++=|.
T Consensus 67 ~l~~HP~lg~~~--~~~~S~~EQ~--gl~~l~-~~~~~~l~~lN~~Y~~kF-GfpFii~v~---g~s~~~IL~~l~~Rl~ 137 (166)
T PRK13798 67 ALAGHPRIGERP--ASKASAREQA--GVADAD-EAVMAALAAGNRAYEEKF-GFVFLICAT---GRSADEMLAALQQRLH 137 (166)
T ss_pred HHHhCCcccCcc--ccccCHHHhc--ccccCC-HHHHHHHHHHHHHHHHhC-CCeEEEeeC---CCCHHHHHHHHHHHhc
Confidence 445688886543 2233677743 322110 000 0146788888877 666555433 2388999999988887
Q ss_pred CCcHHHHHHHHHHHHHHHH
Q 038830 291 GKRDKEIKQNADKWRNFAK 309 (335)
Q Consensus 291 ~~~~~~~r~~a~~l~~~~~ 309 (335)
++.-.+++..+.++++.++
T Consensus 138 n~~e~E~~~al~Ev~kIa~ 156 (166)
T PRK13798 138 NDPETERKVVREELAKINR 156 (166)
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 7656688888888888765
Done!