BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038833
(120 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O60870|KIN17_HUMAN DNA/RNA-binding protein KIN17 OS=Homo sapiens GN=KIN PE=1 SV=2
Length = 393
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 66/117 (56%), Gaps = 12/117 (10%)
Query: 15 DYWLFKGIIVEVMSKAFADKGYCKQKGIVRKVIDKYHV----------LRADHDELETVI 64
DYWL IIV++++K +K Y K+K IV++VIDKY L+ D LETVI
Sbjct: 278 DYWLQPEIIVKIITKKLGEK-YHKKKAIVKEVIDKYTAVVKMIDSGDKLKLDQTHLETVI 336
Query: 65 PQI-EGLVIVNGAYQGSNARLLGVDNDKFCAKTKIEKGVNDGRVLNAIDYEDICKLA 120
P + ++++NG Y+G+ L ++ F A IE G GR + I YEDI KLA
Sbjct: 337 PAPGKRILVLNGGYRGNEGTLESINEKTFSATIVIETGPLKGRRVEGIQYEDISKLA 393
>sp|Q8K339|KIN17_MOUSE DNA/RNA-binding protein KIN17 OS=Mus musculus GN=Kin PE=2 SV=1
Length = 391
Score = 76.6 bits (187), Expect = 4e-14, Method: Composition-based stats.
Identities = 48/129 (37%), Positives = 73/129 (56%), Gaps = 12/129 (9%)
Query: 3 EEEKVKEKMNTQDYWLFKGIIVEVMSKAFADKGYCKQKGIVRKVIDKYHV---------- 52
E E+ K++ D WL GI+V++++K +K Y K+KG+V++VID+Y
Sbjct: 264 ELEEEKKRTARTDAWLQPGIVVKIITKKLGEK-YHKKKGVVKEVIDRYTAVVKMTDSGDR 322
Query: 53 LRADHDELETVIPQI-EGLVIVNGAYQGSNARLLGVDNDKFCAKTKIEKGVNDGRVLNAI 111
L+ D LETVIP + ++++NG Y+G+ L ++ F A IE G GR + I
Sbjct: 323 LKLDQTHLETVIPAPGKRVLVLNGGYRGNEGTLESINEKAFSATIVIETGPLKGRRVEGI 382
Query: 112 DYEDICKLA 120
YEDI KLA
Sbjct: 383 QYEDISKLA 391
>sp|Q55D16|KIN17_DICDI KIN17-like protein OS=Dictyostelium discoideum GN=DDB_G0269816 PE=3
SV=1
Length = 445
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 15/113 (13%)
Query: 17 WLFKGIIVEVMSKAFADKGYCKQKGIV----------RKVIDKYHVLRADHDELETVIPQ 66
W+ K I+++++ K A+ Y KQKG + K++D +L+ D LETVIPQ
Sbjct: 335 WIIKDIVIKIIDKELANGKYFKQKGYIVSVENEFLAKVKLLDSGDILKIDQTFLETVIPQ 394
Query: 67 I-EGLVIVNGAYQGSNARLLGVDNDKFCAKTKIEKGVNDGRVLNAIDYEDICK 118
I ++IVNG Y+G A + V+ D F AK I+ D + + YE K
Sbjct: 395 IGSTVIIVNGKYRGKEATIKNVNFDDFNAKLYIK----DNDITITLPYESFSK 443
>sp|Q6P5E8|DGKQ_MOUSE Diacylglycerol kinase theta OS=Mus musculus GN=Dgkq PE=1 SV=1
Length = 934
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 53 LRADHDELETVIPQIEGLVIVNGAYQGSNARLLGVDNDKFCAKTKIEKGV 102
+R ++ E +P IEGL+ +N GS A L G DND K +I+ G+
Sbjct: 789 IRLQVEQQEVELPSIEGLIFINIPSWGSGADLWGSDNDSRFEKPRIDDGL 838
>sp|Q6NU07|GPKOW_XENLA G patch domain and KOW motifs-containing protein OS=Xenopus laevis
GN=gpkow PE=2 SV=1
Length = 487
Score = 38.1 bits (87), Expect = 0.014, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 16/128 (12%)
Query: 3 EEEKVKEKMNTQDY-WLFKGIIVEVMSKAFADKGYCKQKGIVRKVIDKYH-VLRADH--- 57
E+EK K+K+ + + WL + I V + K + Y K +V V+ V R ++
Sbjct: 355 EQEKEKKKIRPEPHGWLRRDIRVRFIDKNYKGGKYYNSKMLVEDVLSPTRCVCRTENGCI 414
Query: 58 ------DELETVIPQIEG--LVIVNGAYQGSNARLLGVDNDKFCAKTKIEKGVNDGRVLN 109
D LET+IP+ EG +++V G Y+G ++L D K A +++ + L+
Sbjct: 415 LEDIRQDMLETIIPKEEGEHVMVVLGKYRGMVGKILHRDKQKSRALVQLQGEHDSAETLS 474
Query: 110 AIDYEDIC 117
Y+ IC
Sbjct: 475 ---YDAIC 479
>sp|P52824|DGKQ_HUMAN Diacylglycerol kinase theta OS=Homo sapiens GN=DGKQ PE=1 SV=2
Length = 942
Score = 34.3 bits (77), Expect = 0.24, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 53 LRADHDELETVIPQIEGLVIVNGAYQGSNARLLGVDNDKFCAKTKIEKGV 102
L+ + E+E +P IEGL+ +N GS A L G D+D K +++ G+
Sbjct: 799 LQVERQEVE--LPSIEGLIFINIPSWGSGADLWGSDSDTRFEKPRMDDGL 846
>sp|P12348|PER_DROPS Period circadian protein OS=Drosophila pseudoobscura pseudoobscura
GN=per PE=3 SV=3
Length = 1271
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 22/101 (21%)
Query: 1 MREEEKVKEKMNTQDYWLFK------GIIVEVMSKAFADKGYCKQKGIVRKVIDKYHVLR 54
++ +V E++++Q F GII V S A + GY Q + R ++D YH
Sbjct: 335 IKSSYRVPEEIHSQRSPKFAIRHTAAGIISHVDSAAVSALGYLPQDLMGRSIMDLYH--- 391
Query: 55 ADHDELETVIPQIEGLVIVNGAYQGSNARLLGVDNDKFCAK 95
HD+L VI +I V+ G G++ FC+K
Sbjct: 392 --HDDL-PVIKEIYESVMKKGQTAGAS----------FCSK 419
>sp|Q9SCP5|U73C7_ARATH UDP-glycosyltransferase 73C7 OS=Arabidopsis thaliana GN=UGT73C7
PE=2 SV=1
Length = 490
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 38 KQKGIVRKVI--DKYHVLRADHDELETVIPQIEGLVIVNGAYQGSNARLLGVDNDKF 92
++ GI++ + D+Y L D++E PQ+ L V G + S A+++ DND +
Sbjct: 160 RESGILKMIESNDEYFDLPGLPDKVEFTKPQVSVLQPVEGNMKESTAKIIEADNDSY 216
>sp|Q45710|C14AA_BACTS Pesticidal crystal protein cry14Aa OS=Bacillus thuringiensis subsp.
sotto GN=cry14Aa PE=2 SV=1
Length = 1186
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 15/60 (25%)
Query: 9 EKMNTQDYWLFKGIIVEVMS---------------KAFADKGYCKQKGIVRKVIDKYHVL 53
EK+ TQ Y LFK E ++ A +D+ +C++K ++RK+++K + L
Sbjct: 727 EKITTQVYMLFKSSSYEELALKVSSYQINQVALKVMALSDEKFCEEKRLLRKLVNKANQL 786
>sp|O45521|NH111_CAEEL Nuclear hormone receptor family member nhr-111 OS=Caenorhabditis
elegans GN=nhr-111 PE=1 SV=2
Length = 311
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 5 EKVKE-KMNTQDYWLFKGIIVEVMSKAFADKGYCKQKGIVRKVIDKYHV 52
EK K +++ QDY+L KGII+ +K D + +Q I ++++ H+
Sbjct: 222 EKFKSLELSAQDYFLLKGIIIFTETKDGTDLKFDRQLDICIGLLNQLHL 270
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,709,249
Number of Sequences: 539616
Number of extensions: 1841217
Number of successful extensions: 4093
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 4075
Number of HSP's gapped (non-prelim): 21
length of query: 120
length of database: 191,569,459
effective HSP length: 87
effective length of query: 33
effective length of database: 144,622,867
effective search space: 4772554611
effective search space used: 4772554611
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)