BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038835
(337 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 214 bits (545), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 178/288 (61%), Gaps = 9/288 (3%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLY 176
HRDLKP+NLL++ + IK+ADFGLAR +T V T WYRAPE+LL Y
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYY 181
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
S+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W + +YK
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG---VTSMPDYK 238
Query: 237 --FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 214 bits (545), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 112/286 (39%), Positives = 176/286 (61%), Gaps = 5/286 (1%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLY 176
HRDLKP+NLL++ + IK+ADFGLAR +T V T WYRAPE+LL Y
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYY 188
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
S+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 189 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYKPS 247
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 248 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 293
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 214 bits (545), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 176/288 (61%), Gaps = 9/288 (3%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEY---VSTRWYRAPEVLLQSY 174
HRDLKPENLL++ + IK+ADFGLAR P Y V T WYRAPE+LL
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEILLGCK 180
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
YS+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 239
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 214 bits (545), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 176/288 (61%), Gaps = 9/288 (3%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEY---VSTRWYRAPEVLLQSY 174
HRDLKPENLL++ + IK+ADFGLAR P Y V T WYRAPE+LL
Sbjct: 125 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEILLGCK 182
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
YS+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 241
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 214 bits (544), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 176/288 (61%), Gaps = 9/288 (3%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEY---VSTRWYRAPEVLLQSY 174
HRDLKPENLL++ + IK+ADFGLAR P Y V T WYRAPE+LL
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEILLGCK 180
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
YS+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 239
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 214 bits (544), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 112/286 (39%), Positives = 176/286 (61%), Gaps = 5/286 (1%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLY 176
HRDLKP+NLL++ + IK+ADFGLAR +T V T WYRAPE+LL Y
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 182
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
S+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYKPS 241
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 214 bits (544), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 176/288 (61%), Gaps = 9/288 (3%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEY---VSTRWYRAPEVLLQSY 174
HRDLKPENLL++ + IK+ADFGLAR P Y V T WYRAPE+LL
Sbjct: 124 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEILLGCK 181
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
YS+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 240
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 288
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 214 bits (544), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 112/286 (39%), Positives = 176/286 (61%), Gaps = 5/286 (1%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLY 176
HRDLKP+NLL++ + IK+ADFGLAR +T V T WYRAPE+LL Y
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 185
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
S+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 186 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYKPS 244
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 245 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 290
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 214 bits (544), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 112/286 (39%), Positives = 176/286 (61%), Gaps = 5/286 (1%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLY 176
HRDLKP+NLL++ + IK+ADFGLAR +T V T WYRAPE+LL Y
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
S+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYKPS 240
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 214 bits (544), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 112/286 (39%), Positives = 176/286 (61%), Gaps = 5/286 (1%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLY 176
HRDLKP+NLL++ + IK+ADFGLAR +T V T WYRAPE+LL Y
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
S+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYKPS 239
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 214 bits (544), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 112/286 (39%), Positives = 176/286 (61%), Gaps = 5/286 (1%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLY 176
HRDLKP+NLL++ + IK+ADFGLAR +T V T WYRAPE+LL Y
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 188
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
S+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 189 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYKPS 247
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 248 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 293
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 214 bits (544), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 178/288 (61%), Gaps = 9/288 (3%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLY 176
HRDLKP+NLL++ + IK+ADFGLAR +T V T WYRAPE+LL Y
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
S+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W + +YK
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG---VTSMPDYK 238
Query: 237 --FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 175/288 (60%), Gaps = 9/288 (3%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L M ++++ FQ+ QGLA+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEY---VSTRWYRAPEVLLQSY 174
HRDLKPENLL++ + IK+ADFGLAR P Y V T WYRAPE+LL
Sbjct: 122 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEILLGCK 179
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
YS+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 238
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 175/288 (60%), Gaps = 9/288 (3%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L M ++++ FQ+ QGLA+ H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEY---VSTRWYRAPEVLLQSY 174
HRDLKP+NLL++ + IK+ADFGLAR P Y V T WYRAPE+LL
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEILLGCK 182
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
YS+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 241
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 176/288 (61%), Gaps = 9/288 (3%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEY---VSTRWYRAPEVLLQSY 174
HRDLKP+NLL++ + IK+ADFGLAR P Y V T WYRAPE+LL
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEILLGCK 182
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
YS+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 241
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 175/288 (60%), Gaps = 9/288 (3%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L M ++++ FQ+ QGLA+ H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEY---VSTRWYRAPEVLLQSY 174
HRDLKP+NLL++ + IK+ADFGLAR P Y V T WYRAPE+LL
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEILLGCK 181
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
YS+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 240
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 288
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 176/288 (61%), Gaps = 9/288 (3%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEY---VSTRWYRAPEVLLQSY 174
HRDLKP+NLL++ + IK+ADFGLAR P Y V T WYRAPE+LL
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEILLGCK 178
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
YS+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 237
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/286 (38%), Positives = 176/286 (61%), Gaps = 5/286 (1%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGL++ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLY 176
HRDLKP+NLL++ + IK+ADFGLAR +T V T WYRAPE+LL Y
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
S+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYKPS 240
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 176/288 (61%), Gaps = 9/288 (3%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEY---VSTRWYRAPEVLLQSY 174
HRDLKP+NLL++ + IK+ADFGLAR P Y V T WYRAPE+LL
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEILLGCK 178
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
YS+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 237
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 176/288 (61%), Gaps = 9/288 (3%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEY---VSTRWYRAPEVLLQSY 174
HRDLKP+NLL++ + IK+ADFGLAR P Y V T WYRAPE+LL
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEILLGCK 179
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
YS+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 238
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 176/288 (61%), Gaps = 9/288 (3%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEY---VSTRWYRAPEVLLQSY 174
HRDLKP+NLL++ + IK+ADFGLAR P Y V T WYRAPE+LL
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEILLGCK 179
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
YS+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 238
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 176/288 (61%), Gaps = 9/288 (3%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEY---VSTRWYRAPEVLLQSY 174
HRDLKP+NLL++ + IK+ADFGLAR P Y V T WYRAPE+LL
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEILLGCK 179
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
YS+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 238
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 178/290 (61%), Gaps = 13/290 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEY---VSTRWYRAPEVLLQSY 174
HRDLKP+NLL++ + IK+ADFGLAR P Y V T WYRAPE+LL
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEILLGCK 183
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
YS+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W + +
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG---VTSMPD 240
Query: 235 YK--FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
YK FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 241 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 290
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 176/288 (61%), Gaps = 9/288 (3%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEY---VSTRWYRAPEVLLQSY 174
HRDLKP+NLL++ + IK+ADFGLAR P Y V T WYRAPE+LL
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEILLGCK 179
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
YS+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 238
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 178/290 (61%), Gaps = 13/290 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEY---VSTRWYRAPEVLLQSY 174
HRDLKP+NLL++ + IK+ADFGLAR P Y V T WYRAPE+LL
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEILLGCK 180
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
YS+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W + +
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG---VTSMPD 237
Query: 235 YK--FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
YK FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 238 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 176/288 (61%), Gaps = 9/288 (3%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEY---VSTRWYRAPEVLLQSY 174
HRDLKP+NLL++ + IK+ADFGLAR P Y V T WYRAPE+LL
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEILLGCK 182
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
YS+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 241
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 176/288 (61%), Gaps = 9/288 (3%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEY---VSTRWYRAPEVLLQSY 174
HRDLKP+NLL++ + IK+ADFGLAR P Y V T WYRAPE+LL
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEILLGCK 181
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
YS+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 240
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 288
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/286 (39%), Positives = 175/286 (61%), Gaps = 5/286 (1%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L M ++++ FQ+ QGLA+ H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLY 176
HRDLKP+NLL++ + IK+ADFGLAR +T V T WYRAPE+LL Y
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
S+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYKPS 239
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 176/288 (61%), Gaps = 9/288 (3%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEY---VSTRWYRAPEVLLQSY 174
HRDLKP+NLL++ + IK+ADFGLAR P Y V T WYRAPE+LL
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEILLGCK 180
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
YS+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 239
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 212 bits (540), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 176/288 (61%), Gaps = 9/288 (3%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEY---VSTRWYRAPEVLLQSY 174
HRDLKP+NLL++ + IK+ADFGLAR P Y V T WYRAPE+LL
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEILLGCK 181
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
YS+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 240
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 288
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 212 bits (540), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 177/288 (61%), Gaps = 9/288 (3%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE+++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEY---VSTRWYRAPEVLLQSY 174
HRDLKP+NLL++ + IK+ADFGLAR P Y V T WYRAPE+LL
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEILLGCK 182
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
YS+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 241
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 212 bits (539), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 175/288 (60%), Gaps = 9/288 (3%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L M ++++ FQ+ QGLA+ H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEY---VSTRWYRAPEVLLQSY 174
HRDLKP+NLL++ + IK+ADFGLAR P Y V T WYRAPE+LL
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEILLGCK 182
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
YS+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 241
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/286 (38%), Positives = 175/286 (61%), Gaps = 5/286 (1%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+ K++ +RE+ L++++H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLY 176
HRDLKP+NLL++ + IK+ADFGLAR +T V T WYRAPE+LL Y
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
S+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYKPS 240
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/286 (38%), Positives = 175/286 (61%), Gaps = 5/286 (1%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME ++ ++++G+GT+G V++A +K +GEVVA+ K++ +RE+ L++++H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQ 118
PNIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLY 176
HRDLKP+NLL++ + IK+ADFGLAR +T V T WYRAPE+LL Y
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
S+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYKPS 239
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 211 bits (538), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 175/285 (61%), Gaps = 5/285 (1%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSHP 60
E ++ ++++G+GT+G V++A +K +GEVVA+KK++ +RE+ L++++HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 61 NIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQR 119
NIVKL +VI + LY VFE++ +L + M ++++ FQ+ QGLA+ H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 120 GYFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLYS 177
HRDLKP+NLL++ + IK+ADFGLAR +T V T WYRAPE+LL YS
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 178 SKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKF 237
+ VD+W++G I AE++T R LFPG SE D++++I +GTP + W G+ F
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYKPSF 240
Query: 238 PQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
P+ S ++P ++D SL++ + +DP+KR +A AL HPF
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 182/287 (63%), Gaps = 8/287 (2%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV---NLREVKSLRKM 57
ME+Y+ +++VG+GT+G V++A Q G +VA+K+++ + +E + +RE+ L+++
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLD--AEDEGIPSTAIREISLLKEL 76
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNIV L +VI L VFE+ME +L +++ + + +++++ + +Q+ +G+A+ H
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 118 QRGYFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYL 175
Q HRDLKP+NLL++ D +K+ADFGLAR +T V T WYRAP+VL+ S
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKK 196
Query: 176 YSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
YS+ VD+W++G I AE+IT +PLFPG ++ D++ KI S++GTP W L
Sbjct: 197 YSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQR 256
Query: 236 KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
F P S ++P ++ + L++++ +DP+KR +A +A+ HP+
Sbjct: 257 TFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 182/287 (63%), Gaps = 8/287 (2%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV---NLREVKSLRKM 57
ME+Y+ +++VG+GT+G V++A Q G +VA+K+++ + +E + +RE+ L+++
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLD--AEDEGIPSTAIREISLLKEL 76
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNIV L +VI L VFE+ME +L +++ + + +++++ + +Q+ +G+A+ H
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 118 QRGYFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYL 175
Q HRDLKP+NLL++ D +K+ADFGLAR +T V T WYRAP+VL+ S
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKK 196
Query: 176 YSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
YS+ VD+W++G I AE+IT +PLFPG ++ D++ KI S++GTP W L
Sbjct: 197 YSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQR 256
Query: 236 KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
F P S ++P ++ + L++++ +DP+KR +A +A+ HP+
Sbjct: 257 TFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 207 bits (527), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 172/285 (60%), Gaps = 10/285 (3%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVN---LREVKSLRKM 57
+RY+ + +G+G F +V++A K + ++VAIKK+K + S ++ +N LRE+K L+++
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL 69
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
SHPNI+ L + + VF++ME +L ++KD + + ++ + QGL Y+H
Sbjct: 70 SHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH 129
Query: 118 QRGYFHRDLKPENLLVSKDTI-KIADFGLAREINS-RPPFTEYVSTRWYRAPEVLLQSYL 175
Q HRDLKP NLL+ ++ + K+ADFGLA+ S + V TRWYRAPE+L + +
Sbjct: 130 QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARM 189
Query: 176 YSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
Y VDMWA+G I+AEL+ P PG S+ D++ +I +GTPT++ W D L + +
Sbjct: 190 YGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF 249
Query: 236 K-FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
K FP G+PL + +A D + LI L ++P R TA +AL+
Sbjct: 250 KSFP---GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 169/285 (59%), Gaps = 4/285 (1%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHP 60
ME Y + ++G+GT+ +V++ SK + +VA+K+++ ++ C +REV L+ + H
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 61 NIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
NIV L ++I L VFEY++ +L Q + D + V+ + FQ+ +GLAY H++
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK 120
Query: 121 YFHRDLKPENLLVS-KDTIKIADFGLAREINSRP--PFTEYVSTRWYRAPEVLLQSYLYS 177
HRDLKP+NLL++ + +K+ADFGLAR S P + V T WYR P++LL S YS
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLAR-AKSIPTKTYDNEVVTLWYRPPDILLGSTDYS 179
Query: 178 SKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKF 237
+++DMW +G I E+ T RPLFPG++ ++++ I ++GTPT+++W L Y +
Sbjct: 180 TQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNY 239
Query: 238 PQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
P+ L P + D L+ L ++ R +A +A++HPF
Sbjct: 240 PKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPF 284
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 196 bits (498), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 170/285 (59%), Gaps = 5/285 (1%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME+Y ++++G+GT+G V++A GE A+KK++ +K +RE+ L+++ H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
NIVKL +VI L VFE+++ +L +L+ E +++ Q+ G+AY H R
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 120 GYFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLYS 177
HRDLKP+NLL++++ +KIADFGLAR +T V T WYRAP+VL+ S YS
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 178 SKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKF 237
+ +D+W++G I AE++ PLFPG SEAD++ +I ++GTP +W + L + + F
Sbjct: 180 TTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK-YDPNF 238
Query: 238 PQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+P + ++ + L++ + DP++R TA +AL+H +
Sbjct: 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 170/285 (59%), Gaps = 5/285 (1%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME+Y ++++G+GT+G V++A GE A+KK++ +K +RE+ L+++ H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
NIVKL +VI L VFE+++ +L +L+ E +++ Q+ G+AY H R
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 120 GYFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLYS 177
HRDLKP+NLL++++ +KIADFGLAR +T V T WYRAP+VL+ S YS
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 178 SKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKF 237
+ +D+W++G I AE++ PLFPG SEAD++ +I ++GTP +W + L + + F
Sbjct: 180 TTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK-YDPNF 238
Query: 238 PQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+P + ++ + L++ + DP++R TA +AL+H +
Sbjct: 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 170/285 (59%), Gaps = 5/285 (1%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME+Y ++++G+GT+G V++A GE A+KK++ +K +RE+ L+++ H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
NIVKL +VI L VFE+++ +L +L+ E +++ Q+ G+AY H R
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 120 GYFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLYS 177
HRDLKP+NLL++++ +KIADFGLAR +T + T WYRAP+VL+ S YS
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYS 179
Query: 178 SKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKF 237
+ +D+W++G I AE++ PLFPG SEAD++ +I ++GTP +W + L + + F
Sbjct: 180 TTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK-YDPNF 238
Query: 238 PQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+P + ++ + L++ + DP++R TA +AL+H +
Sbjct: 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 193 bits (490), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 171/295 (57%), Gaps = 15/295 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
+ Y++I+ +G+G +G V A + +G+ VAIKK+ + LRE+K L+ H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 61 NIVKLKEVIR------ENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
NI+ +K+++R E +Y V + ME +L+Q++ + E VR + +Q+ +GL
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLE-HVRYFLYQLLRGLK 172
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPP-----FTEYVSTRWYRAPE 168
YMH HRDLKP NLLV+++ +KI DFG+AR + + P TEYV+TRWYRAPE
Sbjct: 173 YMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 232
Query: 169 VLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDS-WADGL 227
++L + Y+ +D+W++G I E++ R LFPG + ++ I V+GTP+ A G
Sbjct: 233 LMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGA 292
Query: 228 LLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
RA P VP + P A++ A+SL+ + ++PS R +AA AL+HPF
Sbjct: 293 ERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPF 347
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 192 bits (487), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 171/295 (57%), Gaps = 15/295 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
+ Y++I+ +G+G +G V A + +G+ VAIKK+ + LRE+K L+ H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 61 NIVKLKEVIR------ENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
NI+ +K+++R E +Y V + ME +L+Q++ + E VR + +Q+ +GL
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLE-HVRYFLYQLLRGLK 173
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPP-----FTEYVSTRWYRAPE 168
YMH HRDLKP NLLV+++ +KI DFG+AR + + P TEYV+TRWYRAPE
Sbjct: 174 YMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 233
Query: 169 VLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDS-WADGL 227
++L + Y+ +D+W++G I E++ R LFPG + ++ I V+GTP+ A G
Sbjct: 234 LMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGA 293
Query: 228 LLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
RA P VP + P A++ A+SL+ + ++PS R +AA AL+HPF
Sbjct: 294 ERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPF 348
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 191 bits (485), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 172/293 (58%), Gaps = 15/293 (5%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV---NLREVKSLRKM 57
++RY+ I ++G+GT+G V++AI + E VAIK+++ ++ EE V +REV L+++
Sbjct: 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE--EEGVPGTAIREVSLLKEL 90
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
H NI++LK VI N L+ +FEY E +L + M D+ S ++++ +Q+ G+ + H
Sbjct: 91 QHRNIIELKSVIHHNHRLHLIFEYAENDLKKYM-DKNPDVSMRVIKSFLYQLINGVNFCH 149
Query: 118 QRGYFHRDLKPENLLVS------KDTIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVL 170
R HRDLKP+NLL+S +KI DFGLAR FT + T WYR PE+L
Sbjct: 150 SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEIL 209
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
L S YS+ VD+W++ I AE++ PLFPG SE D+++KI V+G P +W G+
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWP-GVTAL 268
Query: 231 RAINYKFPQLVGVPLS-VLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ G L VL + + + L+ ++ DP KR +A AL+HP+
Sbjct: 269 PDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPY 321
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 168/292 (57%), Gaps = 15/292 (5%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
RY + +G+G +G V A + VAIKK+ + LRE+K L H NI
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 63 VKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+ + ++IR I +Y V + ME +LY+L+K + S + + +Q+ +GL Y+H
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 143
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLAR----EINSRPPFTEYVSTRWYRAPEVLLQ 172
HRDLKP NLL++ + +KI DFGLAR + + TEYV+TRWYRAPE++L
Sbjct: 144 SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
S Y+ +D+W++G I+AE+++ RP+FPG D++ I ++G+P+Q+ G+ L +A
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINL-KA 262
Query: 233 INY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY P VP + L P+A+ A+ L+ + +++P KR +AL HP+
Sbjct: 263 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 314
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 187 bits (475), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 168/292 (57%), Gaps = 15/292 (5%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
RY + +G+G +G V A + VAIKK+ + LRE+K L + H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENI 87
Query: 63 VKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+ + ++IR I +Y V + ME +LY+L+K + S + + +Q+ +GL Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 145
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAR----EINSRPPFTEYVSTRWYRAPEVLLQ 172
HRDLKP NLL+ + +KI DFGLAR + + TEYV+TRWYRAPE++L
Sbjct: 146 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
S Y+ +D+W++G I+AE+++ RP+FPG D++ I ++G+P+Q+ + ++ +A
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIINLKA 264
Query: 233 INY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY P VP + L P+A+ A+ L+ + +++P KR +AL HP+
Sbjct: 265 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 168/292 (57%), Gaps = 15/292 (5%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
RY + +G+G +G V A + VAIKK+ + LRE+K L + H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 63 VKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+ + ++IR I +Y V + ME +LY+L+K + S + + +Q+ +GL Y+H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 141
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAR----EINSRPPFTEYVSTRWYRAPEVLLQ 172
HRDLKP NLL+ + +KI DFGLAR + + TEYV+TRWYRAPE++L
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
S Y+ +D+W++G I+AE+++ RP+FPG D++ I ++G+P+Q+ + ++ +A
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NXIINLKA 260
Query: 233 INY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY P VP + L P+A+ A+ L+ + +++P KR +AL HP+
Sbjct: 261 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 312
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 186 bits (472), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 168/292 (57%), Gaps = 15/292 (5%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
RY + +G+G +G V A + VAIKK+ + LRE+K L + H NI
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 85
Query: 63 VKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+ + ++IR I +Y V + ME +LY+L+K + S + + +Q+ +GL Y+H
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 143
Query: 118 QRGYFHRDLKPENLLVSKD-TIKIADFGLAR----EINSRPPFTEYVSTRWYRAPEVLLQ 172
HRDLKP NLL++ +KI DFGLAR + + TEYV+TRWYRAPE++L
Sbjct: 144 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
S Y+ +D+W++G I+AE+++ RP+FPG D++ I ++G+P+Q+ + ++ +A
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIINLKA 262
Query: 233 INY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY P VP + L P+A+ A+ L+ + +++P KR +AL HP+
Sbjct: 263 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 314
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 186 bits (472), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 168/292 (57%), Gaps = 15/292 (5%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
RY + +G+G +G V A + VAIKK+ + LRE+K L + H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 63 VKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+ + ++IR I +Y V + ME +LY+L+K + S + + +Q+ +GL Y+H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 141
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAR----EINSRPPFTEYVSTRWYRAPEVLLQ 172
HRDLKP NLL+ + +KI DFGLAR + + TEYV+TRWYRAPE++L
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
S Y+ +D+W++G I+AE+++ RP+FPG D++ I ++G+P+Q+ + ++ +A
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NXIINLKA 260
Query: 233 INY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY P VP + L P+A+ A+ L+ + +++P KR +AL HP+
Sbjct: 261 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 312
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 168/292 (57%), Gaps = 15/292 (5%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
RY + +G+G +G V A + VAIKK+ + LRE+K L + H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 63 VKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+ + ++IR I +Y V + ME +LY+L+K + S + + +Q+ +GL Y+H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 141
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAR----EINSRPPFTEYVSTRWYRAPEVLLQ 172
HRDLKP NLL+ + +KI DFGLAR + + TEYV+TRWYRAPE++L
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
S Y+ +D+W++G I+AE+++ RP+FPG D++ I ++G+P+Q+ + ++ +A
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIINLKA 260
Query: 233 INY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY P VP + L P+A+ A+ L+ + +++P KR +AL HP+
Sbjct: 261 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 312
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 168/292 (57%), Gaps = 15/292 (5%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
RY + +G+G +G V A + VAIKK+ + LRE+K L + H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 63 VKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+ + ++IR I +Y V + ME +LY+L+K + S + + +Q+ +GL Y+H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 141
Query: 118 QRGYFHRDLKPENLLVSKD-TIKIADFGLAR----EINSRPPFTEYVSTRWYRAPEVLLQ 172
HRDLKP NLL++ +KI DFGLAR + + TEYV+TRWYRAPE++L
Sbjct: 142 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
S Y+ +D+W++G I+AE+++ RP+FPG D++ I ++G+P+Q+ + ++ +A
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIINLKA 260
Query: 233 INY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY P VP + L P+A+ A+ L+ + +++P KR +AL HP+
Sbjct: 261 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 312
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 168/292 (57%), Gaps = 15/292 (5%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
RY + +G+G +G V A + VAIKK+ + LRE+K L + H NI
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 63 VKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+ + ++IR I +Y V + ME +LY+L+K + S + + +Q+ +GL Y+H
Sbjct: 104 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 161
Query: 118 QRGYFHRDLKPENLLVSKD-TIKIADFGLAR----EINSRPPFTEYVSTRWYRAPEVLLQ 172
HRDLKP NLL++ +KI DFGLAR + + TEYV+TRWYRAPE++L
Sbjct: 162 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
S Y+ +D+W++G I+AE+++ RP+FPG D++ I ++G+P+Q+ + ++ +A
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIINLKA 280
Query: 233 INY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY P VP + L P+A+ A+ L+ + +++P KR +AL HP+
Sbjct: 281 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 332
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 168/292 (57%), Gaps = 15/292 (5%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
RY + +G+G +G V A + VAIKK+ + LRE+K L + H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 63 VKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+ + ++IR I +Y V + ME +LY+L+K + S + + +Q+ +GL Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 145
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAR----EINSRPPFTEYVSTRWYRAPEVLLQ 172
HRDLKP NLL+ + +KI DFGLAR + + TEYV+TRWYRAPE++L
Sbjct: 146 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
S Y+ +D+W++G I+AE+++ RP+FPG D++ I ++G+P+Q+ + ++ +A
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIINLKA 264
Query: 233 INY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY P VP + L P+A+ A+ L+ + +++P KR +AL HP+
Sbjct: 265 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 168/292 (57%), Gaps = 15/292 (5%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
RY + +G+G +G V A + VAIKK+ + LRE+K L + H NI
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 91
Query: 63 VKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+ + ++IR I +Y V + ME +LY+L+K + S + + +Q+ +GL Y+H
Sbjct: 92 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 149
Query: 118 QRGYFHRDLKPENLLVSKD-TIKIADFGLAR----EINSRPPFTEYVSTRWYRAPEVLLQ 172
HRDLKP NLL++ +KI DFGLAR + + TEYV+TRWYRAPE++L
Sbjct: 150 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 209
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
S Y+ +D+W++G I+AE+++ RP+FPG D++ I ++G+P+Q+ + ++ +A
Sbjct: 210 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIINLKA 268
Query: 233 INY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY P VP + L P+A+ A+ L+ + +++P KR +AL HP+
Sbjct: 269 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 320
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 168/292 (57%), Gaps = 15/292 (5%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
RY + +G+G +G V A + VAIKK+ + LRE+K L + H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 63 VKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+ + ++IR I +Y V + ME +LY+L+K + S + + +Q+ +GL Y+H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 141
Query: 118 QRGYFHRDLKPENLLVSKD-TIKIADFGLAR----EINSRPPFTEYVSTRWYRAPEVLLQ 172
HRDLKP NLL++ +KI DFGLAR + + TEYV+TRWYRAPE++L
Sbjct: 142 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
S Y+ +D+W++G I+AE+++ RP+FPG D++ I ++G+P+Q+ + ++ +A
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIINLKA 260
Query: 233 INY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY P VP + L P+A+ A+ L+ + +++P KR +AL HP+
Sbjct: 261 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 312
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 168/292 (57%), Gaps = 15/292 (5%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
RY + +G+G +G V A + VAIKK+ + LRE+K L + H NI
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 63 VKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+ + ++IR I +Y V + ME +LY+L+K + S + + +Q+ +GL Y+H
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 139
Query: 118 QRGYFHRDLKPENLLVSKD-TIKIADFGLAR----EINSRPPFTEYVSTRWYRAPEVLLQ 172
HRDLKP NLL++ +KI DFGLAR + + TEYV+TRWYRAPE++L
Sbjct: 140 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
S Y+ +D+W++G I+AE+++ RP+FPG D++ I ++G+P+Q+ + ++ +A
Sbjct: 200 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIINLKA 258
Query: 233 INY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY P VP + L P+A+ A+ L+ + +++P KR +AL HP+
Sbjct: 259 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 310
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 168/292 (57%), Gaps = 15/292 (5%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
RY + +G+G +G V A + VAIKK+ + LRE+K L + H NI
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 63 VKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+ + ++IR I +Y V + ME +LY+L+K + S + + +Q+ +GL Y+H
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 146
Query: 118 QRGYFHRDLKPENLLVSKD-TIKIADFGLAR----EINSRPPFTEYVSTRWYRAPEVLLQ 172
HRDLKP NLL++ +KI DFGLAR + + TEYV+TRWYRAPE++L
Sbjct: 147 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 206
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
S Y+ +D+W++G I+AE+++ RP+FPG D++ I ++G+P+Q+ + ++ +A
Sbjct: 207 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIINLKA 265
Query: 233 INY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY P VP + L P+A+ A+ L+ + +++P KR +AL HP+
Sbjct: 266 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 317
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 168/292 (57%), Gaps = 15/292 (5%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
RY + +G+G +G V A + VAIKK+ + LRE+K L + H NI
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 89
Query: 63 VKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+ + ++IR I +Y V + ME +LY+L+K + S + + +Q+ +GL Y+H
Sbjct: 90 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 147
Query: 118 QRGYFHRDLKPENLLVSKD-TIKIADFGLAR----EINSRPPFTEYVSTRWYRAPEVLLQ 172
HRDLKP NLL++ +KI DFGLAR + + TEYV+TRWYRAPE++L
Sbjct: 148 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 207
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
S Y+ +D+W++G I+AE+++ RP+FPG D++ I ++G+P+Q+ + ++ +A
Sbjct: 208 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIINLKA 266
Query: 233 INY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY P VP + L P+A+ A+ L+ + +++P KR +AL HP+
Sbjct: 267 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 318
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 168/292 (57%), Gaps = 15/292 (5%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
RY + +G+G +G V A + VAIKK+ + LRE+K L + H NI
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 80
Query: 63 VKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+ + ++IR I +Y V + ME +LY+L+K + S + + +Q+ +GL Y+H
Sbjct: 81 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 138
Query: 118 QRGYFHRDLKPENLLVSKD-TIKIADFGLAR----EINSRPPFTEYVSTRWYRAPEVLLQ 172
HRDLKP NLL++ +KI DFGLAR + + TEYV+TRWYRAPE++L
Sbjct: 139 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 198
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
S Y+ +D+W++G I+AE+++ RP+FPG D++ I ++G+P+Q+ + ++ +A
Sbjct: 199 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIINLKA 257
Query: 233 INY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY P VP + L P+A+ A+ L+ + +++P KR +AL HP+
Sbjct: 258 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 309
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 168/292 (57%), Gaps = 15/292 (5%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
RY + +G+G +G V A + VAIKK+ + LRE+K L + H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 63 VKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+ + ++IR I +Y V + ME +LY+L+K + S + + +Q+ +GL Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 145
Query: 118 QRGYFHRDLKPENLLVSKD-TIKIADFGLAR----EINSRPPFTEYVSTRWYRAPEVLLQ 172
HRDLKP NLL++ +KI DFGLAR + + TEYV+TRWYRAPE++L
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
S Y+ +D+W++G I+AE+++ RP+FPG D++ I ++G+P+Q+ + ++ +A
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIINLKA 264
Query: 233 INY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY P VP + L P+A+ A+ L+ + +++P KR +AL HP+
Sbjct: 265 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 177/291 (60%), Gaps = 15/291 (5%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV---NLREVKSLRKM 57
M++Y+ ++++G+GT+G+V++A ++++ E+VA+K+++ +E V LRE+ L+++
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLD--DDDEGVPSSALREICLLKEL 58
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
H NIV+L +V+ + L VFE+ + +L + V+++ FQ+ +GL + H
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 118 QRGYFHRDLKPENLLVSKD-TIKIADFGLARE--INSRPPFTEYVSTRWYRAPEVLLQSY 174
R HRDLKP+NLL++++ +K+ADFGLAR I R ++ V T WYR P+VL +
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRC-YSAEVVTLWYRPPDVLFGAK 177
Query: 175 LYSSKVDMWAMGAIMAELIT-LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
LYS+ +DMW+ G I AEL RPLFPG D++ +I ++GTPT++ W + +
Sbjct: 178 LYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPS---MTKLP 234
Query: 234 NYK-FPQL-VGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+YK +P L ++P N L+ +L +P +R +A EALQHP+
Sbjct: 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 167/292 (57%), Gaps = 15/292 (5%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
RY + +G+G +G V A + VAIKK+ + LRE+K L H NI
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 63 VKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+ + ++IR I +Y V + ME +LY+L+K + S + + +Q+ +GL Y+H
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 143
Query: 118 QRGYFHRDLKPENLLVSKD-TIKIADFGLAR----EINSRPPFTEYVSTRWYRAPEVLLQ 172
HRDLKP NLL++ +KI DFGLAR + + TEYV+TRWYRAPE++L
Sbjct: 144 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
S Y+ +D+W++G I+AE+++ RP+FPG D++ I ++G+P+Q+ + ++ +A
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIINLKA 262
Query: 233 INY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY P VP + L P+A+ A+ L+ + +++P KR +AL HP+
Sbjct: 263 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 314
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 185 bits (469), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 168/292 (57%), Gaps = 15/292 (5%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
RY + +G+G +G V A + VAI+K+ + LRE+K L + H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 63 VKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+ + ++IR I +Y V + ME +LY+L+K + S + + +Q+ +GL Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 145
Query: 118 QRGYFHRDLKPENLLVSKD-TIKIADFGLAR----EINSRPPFTEYVSTRWYRAPEVLLQ 172
HRDLKP NLL++ +KI DFGLAR + + TEYV+TRWYRAPE++L
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
S Y+ +D+W++G I+AE+++ RP+FPG D++ I ++G+P+Q+ + ++ +A
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIINLKA 264
Query: 233 INY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY P VP + L P+A+ A+ L+ + +++P KR +AL HP+
Sbjct: 265 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 185 bits (469), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 167/292 (57%), Gaps = 15/292 (5%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
RY + +G+G +G V A + VAIKK+ + LRE+K L + H NI
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 63 VKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+ + ++IR I +Y V + ME +LY+L+K + S + + +Q+ +GL Y+H
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 139
Query: 118 QRGYFHRDLKPENLLVSKD-TIKIADFGLAR----EINSRPPFTEYVSTRWYRAPEVLLQ 172
HRDLKP NLL++ +KI DFGLAR + + TEYV+TRWYRAPE++L
Sbjct: 140 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
S Y+ +D+W++G I+AE+++ RP+FPG D++ I ++G+P Q+ + ++ +A
Sbjct: 200 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDL-NCIINLKA 258
Query: 233 INY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY P VP + L P+A+ A+ L+ + +++P KR +AL HP+
Sbjct: 259 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 310
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 185 bits (469), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 168/292 (57%), Gaps = 15/292 (5%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
RY + +G+G +G V A + VAIKK+ + LRE+K L + H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 63 VKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+ + ++IR I +Y V + ME +LY+L+K + S + + +Q+ +GL Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH--LSNDHICYFLYQILRGLKYIH 145
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLAR----EINSRPPFTEYVSTRWYRAPEVLLQ 172
HRDLKP NLL++ +KI DFGLAR + + TEYV+TRWYRAPE++L
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
S Y+ +D+W++G I+AE+++ RP+FPG D++ I ++G+P+Q+ + ++ +A
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIINLKA 264
Query: 233 INY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY P VP + L P+A+ A+ L+ + +++P KR +AL HP+
Sbjct: 265 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 184 bits (467), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 162/298 (54%), Gaps = 21/298 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
++L +G+G +G V A K +GE+VAIKK++ LRE+K L+ H NI+
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 64 KLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
+ + R + +Y + E M+ +L++++ + S+ ++ + +Q + + +H
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS--TQMLSDDHIQYFIYQTLRAVKVLHG 130
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREI------NSRPP-----FTEYVSTRWYRA 166
HRDLKP NLL++ + +K+ DFGLAR I NS P TEYV+TRWYRA
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRA 190
Query: 167 PEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADG 226
PEV+L S YS +D+W+ G I+AEL RP+FPG ++ I +IGTP D+
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRC 250
Query: 227 LLLARAINY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ RA Y P PL + P N + L+ + +DP+KR TA EAL+HP+
Sbjct: 251 IESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 184 bits (466), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 166/292 (56%), Gaps = 15/292 (5%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
RY + +G+G +G V A + VAIKK+ + LRE+K L + H NI
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 63 VKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+ + ++IR I +Y V M +LY+L+K + S + + +Q+ +GL Y+H
Sbjct: 104 IGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 161
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAR----EINSRPPFTEYVSTRWYRAPEVLLQ 172
HRDLKP NLL+ + +KI DFGLAR + + TEYV+TRWYRAPE++L
Sbjct: 162 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
S Y+ +D+W++G I+AE+++ RP+FPG D++ I ++G+P+Q+ + ++ +A
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIINLKA 280
Query: 233 INY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY P VP + L P+A+ A+ L+ + +++P KR +AL HP+
Sbjct: 281 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 332
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 184 bits (466), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 175/290 (60%), Gaps = 13/290 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV---NLREVKSLRKM 57
M++Y+ ++++G+GT+G+V++A ++++ E+VA+K+++ +E V LRE+ L+++
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLD--DDDEGVPSSALREICLLKEL 58
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
H NIV+L +V+ + L VFE+ + +L + V+++ FQ+ +GL + H
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 118 QRGYFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYL 175
R HRDLKP+NLL++++ +K+A+FGLAR ++ V T WYR P+VL + L
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 176 YSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
YS+ +DMW+ G I AEL RPLFPG D++ +I ++GTPT++ W + + +
Sbjct: 179 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPS---MTKLPD 235
Query: 235 YK-FPQL-VGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
YK +P L ++P N L+ +L +P +R +A EALQHP+
Sbjct: 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 170/292 (58%), Gaps = 15/292 (5%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
RY ++ +G+G +G V A VAIKK+ + LRE++ L + H N+
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENV 103
Query: 63 VKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+ +++++R + + +Y V + ME +LY+L+K ++ S + + +Q+ +GL Y+H
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ--LSNDHICYFLYQILRGLKYIH 161
Query: 118 QRGYFHRDLKPENLLVSKD-TIKIADFGLAR----EINSRPPFTEYVSTRWYRAPEVLLQ 172
HRDLKP NLL++ +KI DFGLAR E + TE V+TRWYRAPE++L
Sbjct: 162 SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLN 221
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
S Y+ +D+W++G I+AE+++ RP+FPG D++ I ++G+P+Q+ + ++ +A
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIINMKA 280
Query: 233 INY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY P V + L P ++ A+ L+ + +++P+KR T EAL HP+
Sbjct: 281 RNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPY 332
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 182 bits (462), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 190/339 (56%), Gaps = 57/339 (16%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY-SWEECVNLREVKSLRKMS- 58
+ +Y+L+K++G G +G VW++I +++GEVVA+KK+ + S + RE+ L ++S
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG 67
Query: 59 HPNIVKLKEVIR-END-ILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
H NIV L V+R +ND +Y VF+YME +L+ ++ R + +Q+ + + Y+
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDYMETDLHAVI--RANILEPVHKQYVVYQLIKVIKYL 125
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREI----------------------NSRP 153
H G HRD+KP N+L++ + +K+ADFGL+R + +P
Sbjct: 126 HSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 154 PFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICS 213
T+YV+TRWYRAPE+LL S Y+ +DMW++G I+ E++ +P+FPG+S +++ +I
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG 245
Query: 214 VIGTPT-------QDSWADGLLLA------------RAINYKFPQLVGVPLSVLMPSA-- 252
VI P+ Q +A ++ + R I K+ L L + P A
Sbjct: 246 VIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNL----LLKINPKADC 301
Query: 253 NKDAVSLIASLCSWDPSKRPTAAEALQHPFSRVAFMFHH 291
N++A+ L+ L ++P+KR +A +AL+HPF + FH+
Sbjct: 302 NEEALDLLDKLLQFNPNKRISANDALKHPFVSI---FHN 337
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 182 bits (462), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 166/292 (56%), Gaps = 15/292 (5%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
RY + +G+G +G V A + VAIKK+ + LRE+K L + H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 63 VKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+ + ++IR I +Y V + ME +LY+L+K + S + + +Q+ +GL Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 145
Query: 118 QRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFT----EYVSTRWYRAPEVLLQ 172
HRDLKP NLL++ +KI DFGLAR + T E V+TRWYRAPE++L
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 205
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
S Y+ +D+W++G I+AE+++ RP+FPG D++ I ++G+P+Q+ + ++ +A
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIINLKA 264
Query: 233 INY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY P VP + L P+A+ A+ L+ + +++P KR +AL HP+
Sbjct: 265 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 182 bits (462), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 166/292 (56%), Gaps = 15/292 (5%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
RY + +G+G +G V A + VAIKK+ + LRE+K L + H NI
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 63 VKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+ + ++IR I +Y V + ME +LY+L+K + S + + +Q+ +GL Y+H
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH 146
Query: 118 QRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFT----EYVSTRWYRAPEVLLQ 172
HRDLKP NLL++ +KI DFGLAR + T E V+TRWYRAPE++L
Sbjct: 147 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 206
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
S Y+ +D+W++G I+AE+++ RP+FPG D++ I ++G+P+Q+ + ++ +A
Sbjct: 207 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIINLKA 265
Query: 233 INY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY P VP + L P+A+ A+ L+ + +++P KR +AL HP+
Sbjct: 266 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 317
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 182 bits (461), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 179/309 (57%), Gaps = 25/309 (8%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
++K ++++G+GT+ +V++ ++K +G VA+K++K +RE+ ++++ H NI
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENI 65
Query: 63 VKLKEVIRENDILYFVFEYMECNLYQLMKDRE-----KCFSEAEVRNWCFQVFQGLAYMH 117
V+L +VI + L VFE+M+ +L + M R + V+ + +Q+ QGLA+ H
Sbjct: 66 VRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH 125
Query: 118 QRGYFHRDLKPENLLVSK-DTIKIADFGLARE----INSRPPFTEYVSTRWYRAPEVLLQ 172
+ HRDLKP+NLL++K +K+ DFGLAR +N+ F+ V T WYRAP+VL+
Sbjct: 126 ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT---FSSEVVTLWYRAPDVLMG 182
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLAR- 231
S YS+ +D+W+ G I+AE+IT +PLFPGT++ +++ I ++GTP + W L +
Sbjct: 183 SRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKY 242
Query: 232 --AINYKFPQLVGVPLSVLMPSA----NKDAVSLIASLCSWDPSKRPTAAEALQHPFSRV 285
I + P+ + VL P + + + + L +P R +A +AL HP+
Sbjct: 243 NPNIQQRPPRDL---RQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW--F 297
Query: 286 AFMFHHLSV 294
A +HH S+
Sbjct: 298 AEYYHHASM 306
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 181 bits (459), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 161/298 (54%), Gaps = 21/298 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
++L +G+G +G V A K +GE+VAIKK++ LRE+K L+ H NI+
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 64 KLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
+ + R + +Y + E M+ +L++++ + S+ ++ + +Q + + +H
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS--TQMLSDDHIQYFIYQTLRAVKVLHG 130
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREI------NSRPP-----FTEYVSTRWYRA 166
HRDLKP NLL++ + +K+ DFGLAR I NS P TE V+TRWYRA
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRA 190
Query: 167 PEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADG 226
PEV+L S YS +D+W+ G I+AEL RP+FPG ++ I +IGTP D+
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRC 250
Query: 227 LLLARAINY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ RA Y P PL + P N + L+ + +DP+KR TA EAL+HP+
Sbjct: 251 IESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 181 bits (458), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 161/298 (54%), Gaps = 21/298 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
++L +G+G +G V A K +GE+VAIKK++ LRE+K L+ H NI+
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 64 KLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
+ + R + +Y + E M+ +L++++ + S+ ++ + +Q + + +H
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS--TQMLSDDHIQYFIYQTLRAVKVLHG 130
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREI------NSRPP-----FTEYVSTRWYRA 166
HRDLKP NLL++ + +K+ DFGLAR I NS P E+V+TRWYRA
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRA 190
Query: 167 PEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADG 226
PEV+L S YS +D+W+ G I+AEL RP+FPG ++ I +IGTP D+
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRC 250
Query: 227 LLLARAINY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ RA Y P PL + P N + L+ + +DP+KR TA EAL+HP+
Sbjct: 251 IESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/283 (39%), Positives = 159/283 (56%), Gaps = 16/283 (5%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSHPNIVKLKEV 68
VG G +GSV AI K+SGE VAIKK+ + + S RE+ L+ M H N++ L +V
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 69 ------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYF 122
+R Y V +M+ +L ++M + FSE +++ +Q+ +GL Y+H G
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLK---FSEEKIQYLVYQMLKGLKYIHSAGVV 148
Query: 123 HRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVD 181
HRDLKP NL V++D +KI DFGLAR ++ T YV TRWYRAPEV+L Y+ VD
Sbjct: 149 HRDLKPGNLAVNEDCELKILDFGLARHADAE--MTGYVVTRWYRAPEVILSWMHYNQTVD 206
Query: 182 MWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY--KFPQ 239
+W++G IMAE++T + LF G D++ +I V G P + + L A +Y PQ
Sbjct: 207 IWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE-FVQKLNDKAAKSYIQSLPQ 265
Query: 240 LVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ L P A+ A L+ + D KR TAA+AL HPF
Sbjct: 266 TPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 308
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/283 (39%), Positives = 158/283 (55%), Gaps = 16/283 (5%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSHPNIVKLKEV 68
VG G +GSV AI K+SGE VAIKK+ + + S RE+ L+ M H N++ L +V
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 69 ------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYF 122
+R Y V +M+ +L ++M FSE +++ +Q+ +GL Y+H G
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGME---FSEEKIQYLVYQMLKGLKYIHSAGVV 166
Query: 123 HRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVD 181
HRDLKP NL V++D +KI DFGLAR ++ T YV TRWYRAPEV+L Y+ VD
Sbjct: 167 HRDLKPGNLAVNEDCELKILDFGLARHADAE--MTGYVVTRWYRAPEVILSWMHYNQTVD 224
Query: 182 MWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY--KFPQ 239
+W++G IMAE++T + LF G D++ +I V G P + + L A +Y PQ
Sbjct: 225 IWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE-FVQKLNDKAAKSYIQSLPQ 283
Query: 240 LVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ L P A+ A L+ + D KR TAA+AL HPF
Sbjct: 284 TPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 326
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 166/293 (56%), Gaps = 19/293 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV---NLREVKSLRKMS- 58
RY+ + E+G G +G+V++A SG VA+K ++ + EE + +REV LR++
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVP--NGEEGLPISTVREVALLRRLEA 62
Query: 59 --HPNIVKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAE-VRNWCFQVF 110
HPN+V+L +V + + VFE+++ +L + AE +++ Q
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 111 QGLAYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
+GL ++H HRDLKPEN+LV S T+K+ADFGLAR + + V T WYRAPEV
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEV 182
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
LLQS Y++ VDMW++G I AE+ +PLF G SEAD++ KI +IG P +D W + L
Sbjct: 183 LLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 241
Query: 230 ARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
R FP P+ ++P + L+ + +++P KR +A ALQH +
Sbjct: 242 PRG---AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY 291
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 178 bits (451), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 166/293 (56%), Gaps = 19/293 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV---NLREVKSLRKMS- 58
RY+ + E+G G +G+V++A SG VA+K ++ + EE + +REV LR++
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVP--NGEEGLPISTVREVALLRRLEA 62
Query: 59 --HPNIVKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAE-VRNWCFQVF 110
HPN+V+L +V + + VFE+++ +L + AE +++ Q
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 111 QGLAYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
+GL ++H HRDLKPEN+LV S T+K+ADFGLAR + + V T WYRAPEV
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEV 182
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
LLQS Y++ VDMW++G I AE+ +PLF G SEAD++ KI +IG P +D W + L
Sbjct: 183 LLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 241
Query: 230 ARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
R FP P+ ++P + L+ + +++P KR +A ALQH +
Sbjct: 242 PRG---AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY 291
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 177 bits (450), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 163/294 (55%), Gaps = 18/294 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV----NLREVKSLRKMS 58
RY+ + E+G G +G+V++A SG VA+K ++ +REV LR++
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLE 69
Query: 59 ---HPNIVKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAE-VRNWCFQV 109
HPN+V+L +V + + VFE+++ +L + AE +++ Q
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 129
Query: 110 FQGLAYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPE 168
+GL ++H HRDLKPEN+LV S T+K+ADFGLAR + + T V T WYRAPE
Sbjct: 130 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPE 189
Query: 169 VLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLL 228
VLLQS Y++ VDMW++G I AE+ +PLF G SEAD++ KI +IG P +D W +
Sbjct: 190 VLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVS 248
Query: 229 LARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
L R FP P+ ++P + L+ + +++P KR +A ALQH +
Sbjct: 249 LPRG---AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY 299
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 177 bits (449), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 166/293 (56%), Gaps = 19/293 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV---NLREVKSLRKMS- 58
RY+ + E+G G +G+V++A SG VA+K ++ + EE + +REV LR++
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVP--NGEEGLPISTVREVALLRRLEA 62
Query: 59 --HPNIVKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAE-VRNWCFQVF 110
HPN+V+L +V + + VFE+++ +L + AE +++ Q
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 111 QGLAYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
+GL ++H HRDLKPEN+LV S T+K+ADFGLAR + + V T WYRAPEV
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEV 182
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
LLQS Y++ VDMW++G I AE+ +PLF G SEAD++ KI +IG P +D W + L
Sbjct: 183 LLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 241
Query: 230 ARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
R FP P+ ++P + L+ + +++P KR +A ALQH +
Sbjct: 242 PRG---AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY 291
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 177 bits (449), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 163/291 (56%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV + +SG +A+KK+ + + S RE++ L+ M H
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 110
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 111 NVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 168
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 169 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 226
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT +++ +I + GTP S + A
Sbjct: 227 MHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPA-SVISRMPSHEAR 285
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY PQ+ + + AN AV L+ + D KR TA+EAL HP+
Sbjct: 286 NYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPY 336
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 177 bits (448), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 163/291 (56%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 139
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L +
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNA 197
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 256
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 159
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 160 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 217
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 276
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 277 NYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 327
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 145
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 146 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 203
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 262
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 263 NYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 313
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 158
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 159 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 216
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 275
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 276 NYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 326
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 139
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 197
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 256
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 257 NYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK--LTDDHVQFLIYQILRGLK 139
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 197
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 256
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK--LTDDHVQFLIYQILRGLK 139
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 197
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 256
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 135
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 136 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 193
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 252
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 253 NYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 303
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 163/291 (56%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 141
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D+ +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 142 YIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 199
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 258
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 259 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 309
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 91
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 92 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 149
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 150 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 207
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 208 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 266
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 267 NYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 317
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 163/291 (56%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 145
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D+ +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 146 YIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 203
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 262
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 263 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 313
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ K + S RE++ L+ M H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 151
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 152 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 209
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 268
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 269 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 319
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/289 (36%), Positives = 164/289 (56%), Gaps = 15/289 (5%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSHPNI 62
Y+ ++ VG G +G+V A+ ++G VAIKK+ + + S RE++ L+ M H N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 63 VKLKEVIRENDIL------YFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
+ L +V ++ L Y V +M +L +LMK + E ++ +Q+ +GL Y+
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK--LGEDRIQFLVYQMLKGLRYI 144
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H G HRDLKP NL V++D +KI DFGLAR+ +S V TRWYRAPEV+L
Sbjct: 145 HAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE--MXGXVVTRWYRAPEVILNWMR 202
Query: 176 YSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
Y+ VD+W++G IMAE+IT + LF G+ D++ +I V GTP + + L A NY
Sbjct: 203 YTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAE-FVQRLQSDEAKNY 261
Query: 236 --KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
P+L + ++ +A+ AV+L+ + D +R TA EAL HP+
Sbjct: 262 MKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPY 310
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 161/293 (54%), Gaps = 19/293 (6%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKC--FSEAEVRNWCFQVFQG 112
N++ L +V + E + +Y V M +L ++K C ++ V+ +Q+ +G
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK----CAKLTDDHVQFLIYQILRG 133
Query: 113 LAYMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
L Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIML 191
Query: 172 QSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLAR 231
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + +
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSES 250
Query: 232 AINY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
A NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 251 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 303
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK--LTDDHVQFLIYQILRGLK 139
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D+ +KI DFGL R + T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE--MTGYVATRWYRAPEIMLNW 197
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 256
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 144
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 145 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 202
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 261
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 262 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 312
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 175 bits (443), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 144
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 145 YIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 202
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 261
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 262 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 312
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 162
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 163 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 220
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 279
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 280 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 330
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 79
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 80 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 137
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 138 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 195
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 196 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 254
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 255 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 305
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 145
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 146 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 203
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 262
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 263 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 313
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 139
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 197
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 256
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 158
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 159 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 216
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 275
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 276 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 326
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 145
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 146 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 203
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 262
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 263 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 313
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 150
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 151 YIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 208
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 267
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 268 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 318
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 159
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 160 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 217
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 276
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 277 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 327
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 139
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 197
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 256
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 146
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 147 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 204
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 263
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 264 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 314
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 141
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 142 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 199
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 258
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 259 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 309
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 135
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 136 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 193
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 252
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 253 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 303
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 150
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 151 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 208
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 267
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 268 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 318
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 139
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 197
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 256
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 139
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 197
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 256
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 174 bits (442), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 151
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 152 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 209
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 268
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 269 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 319
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 174 bits (442), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 151
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 152 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 209
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 268
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 269 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 319
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 174 bits (442), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 139
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 197
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 256
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 174 bits (442), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 136
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 137 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 194
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 253
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 254 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 304
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 174 bits (442), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 141
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 142 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 199
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 258
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 259 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 309
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 174 bits (442), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 136
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 137 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 194
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 253
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 254 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 304
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 139
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 197
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 256
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 139
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 197
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 256
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 141
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 142 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 199
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 258
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 259 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 309
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + +G G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 144
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 145 YIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 202
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 261
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 262 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 312
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 144
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 145 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 202
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 261
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 262 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 312
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 80
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 81 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 138
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 139 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNW 196
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 197 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 255
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 256 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 306
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 174 bits (440), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 163/291 (56%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 146
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR ++ T YV+TRWYRAPE++L
Sbjct: 147 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGYVATRWYRAPEIMLNW 204
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 263
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 264 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 314
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 174 bits (440), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 163/291 (56%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 146
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR ++ T YV+TRWYRAPE++L
Sbjct: 147 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGYVATRWYRAPEIMLNW 204
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 263
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 264 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 314
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 174 bits (440), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 163/291 (56%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 146
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR ++ T YV+TRWYRAPE++L
Sbjct: 147 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGYVATRWYRAPEIMLNW 204
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 263
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 264 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 314
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 165/287 (57%), Gaps = 6/287 (2%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKK-MKKKYYSWEECVNLREVKSLRKMSH 59
ME+Y+ I ++G+G++G V++ ++ +G++VAIKK ++ + + + LRE++ L+++ H
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
PN+V L EV R L+ VFEY + + + ++ E V++ +Q Q + + H+
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH 121
Query: 120 GYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPP-FTEYVSTRWYRAPEVLLQSYLYS 177
HRD+KPEN+L++K + IK+ DFG AR + + + V+TRWYR+PE+L+ Y
Sbjct: 122 NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYG 181
Query: 178 SKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGT--PTQDSWADGLLLARAINY 235
VD+WA+G + AEL++ PL+PG S+ D++Y I +G P +
Sbjct: 182 PPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKI 241
Query: 236 KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
P+ + PL + P+ + A+ L+ DP++R T + L HP+
Sbjct: 242 PDPEDME-PLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPY 287
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 162/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 139
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI D+GLAR + T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE--MTGYVATRWYRAPEIMLNW 197
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 256
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 167/291 (57%), Gaps = 19/291 (6%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
Y K +G+G+FG V++A SGE+VAIKK+ + + RE++ +RK+ H NIV
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQG-----KAFKNRELQIMRKLDHCNIV 76
Query: 64 KLKEVI------RENDILYFVFEYMECNLYQLMKD---REKCFSEAEVRNWCFQVFQGLA 114
+L+ ++ L V +Y+ +Y++ + ++ V+ + +Q+F+ LA
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 115 YMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQ 172
Y+H G HRD+KP+NLL+ DT +K+ DFG A+++ P Y+ +R+YRAPE++
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
+ Y+S +D+W+ G ++AEL+ +P+FPG S D++ +I V+GTPT++ + +
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 254
Query: 233 INYKFPQLVGVP-LSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+KFPQ+ P V P +A++L + L + P+ R T EA H F
Sbjct: 255 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 168/291 (57%), Gaps = 19/291 (6%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
Y K +G+G+FG V++A SGE+VAIKK+ + ++ RE++ +RK+ H NIV
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 64 KLKEVI------RENDILYFVFEYMECNLYQLMKD---REKCFSEAEVRNWCFQVFQGLA 114
+L+ ++ L V +Y+ +Y++ + ++ V+ + +Q+F+ LA
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 115 YMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQ 172
Y+H G HRD+KP+NLL+ DT +K+ DFG A+++ P Y+ +R+YRAPE++
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
+ Y+S +D+W+ G ++AEL+ +P+FPG S D++ +I V+GTPT++ + +
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 254
Query: 233 INYKFPQLVGVP-LSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+KFPQ+ P V P +A++L + L + P+ R T EA H F
Sbjct: 255 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 161/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 162
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + YV+TRWYRAPE++L
Sbjct: 163 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MXGYVATRWYRAPEIMLNW 220
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 279
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 280 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 330
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 161/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 135
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + +V+TRWYRAPE++L
Sbjct: 136 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MAGFVATRWYRAPEIMLNW 193
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 252
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 253 NYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 303
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 161/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 139
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + +V+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MAGFVATRWYRAPEIMLNW 197
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 256
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 161/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 139
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + +V+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MAGFVATRWYRAPEIMLNW 197
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 256
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 257 NYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 168/291 (57%), Gaps = 19/291 (6%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
Y K +G+G+FG V++A SGE+VAIKK+ + ++ RE++ +RK+ H NIV
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 89
Query: 64 KLKEVI------RENDILYFVFEYMECNLYQLMKD---REKCFSEAEVRNWCFQVFQGLA 114
+L+ ++ L V +Y+ +Y++ + ++ V+ + +Q+F+ LA
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 149
Query: 115 YMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQ 172
Y+H G HRD+KP+NLL+ DT +K+ DFG A+++ P Y+ +R+YRAPE++
Sbjct: 150 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 209
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
+ Y+S +D+W+ G ++AEL+ +P+FPG S D++ +I V+GTPT++ + +
Sbjct: 210 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 267
Query: 233 INYKFPQLVGVP-LSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+KFPQ+ P V P +A++L + L + P+ R T EA H F
Sbjct: 268 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 318
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 168/291 (57%), Gaps = 19/291 (6%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
Y K +G+G+FG V++A SGE+VAIKK+ + ++ RE++ +RK+ H NIV
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 81
Query: 64 KLKEVI------RENDILYFVFEYMECNLYQLMKD---REKCFSEAEVRNWCFQVFQGLA 114
+L+ ++ L V +Y+ +Y++ + ++ V+ + +Q+F+ LA
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 141
Query: 115 YMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQ 172
Y+H G HRD+KP+NLL+ DT +K+ DFG A+++ P Y+ +R+YRAPE++
Sbjct: 142 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 201
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
+ Y+S +D+W+ G ++AEL+ +P+FPG S D++ +I V+GTPT++ + +
Sbjct: 202 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 259
Query: 233 INYKFPQLVGVP-LSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+KFPQ+ P V P +A++L + L + P+ R T EA H F
Sbjct: 260 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 310
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 172/297 (57%), Gaps = 24/297 (8%)
Query: 2 ERYKLIKEVGDGTFGSVWRAIS-KQSGEVVAIKKMKKKYYSWEECV---NLREVKSLRKM 57
++Y+ + E+G+G +G V++A K G VA+K+++ + + EE + +REV LR +
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQ--TGEEGMPLSTIREVAVLRHL 68
Query: 58 S---HPNIVKLKEVI------RENDILYFVFEYMECNLYQ-LMKDREKCFSEAEVRNWCF 107
HPN+V+L +V RE L VFE+++ +L L K E +++ F
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETK-LTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 108 QVFQGLAYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRA 166
Q+ +GL ++H HRDLKP+N+LV S IK+ADFGLAR + + T V T WYRA
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 167 PEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADG 226
PEVLLQS Y++ VD+W++G I AE+ +PLF G+S+ D++ KI VIG P ++ W
Sbjct: 188 PEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 227 LLLAR-AINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ L R A + K Q P+ + ++ L+ +++P+KR +A AL HP+
Sbjct: 247 VALPRQAFHSKSAQ----PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 161/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 139
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DF LAR + T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE--MTGYVATRWYRAPEIMLNW 197
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 256
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 171/297 (57%), Gaps = 31/297 (10%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKM--KKKYYSWEECVNLREVKSLRKMSHPN 61
Y K +G+G+FG V++A SGE+VAIKK+ K++ + RE++ +RK+ H N
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCN 102
Query: 62 IVKLKEVI------RENDILYFVFEYMECNLYQLMKDREKCFSEAE-------VRNWCFQ 108
IV+L+ ++ L V +Y+ +Y++ + +S A+ V+ + +Q
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ 158
Query: 109 VFQGLAYMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREINSRPPFTEYVSTRWYRA 166
+F+ LAY+H G HRD+KP+NLL+ DT +K+ DFG A+++ P Y+ +R+YRA
Sbjct: 159 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 218
Query: 167 PEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADG 226
PE++ + Y+S +D+W+ G ++AEL+ +P+FPG S D++ +I V+GTPT++ +
Sbjct: 219 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE- 277
Query: 227 LLLARAINYKFPQLVGVP-LSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ +KFPQ+ P V P +A++L + L + P+ R T EA H F
Sbjct: 278 -MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 333
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 171/297 (57%), Gaps = 31/297 (10%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKM--KKKYYSWEECVNLREVKSLRKMSHPN 61
Y K +G+G+FG V++A SGE+VAIKK+ K++ + RE++ +RK+ H N
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCN 110
Query: 62 IVKLKEVI------RENDILYFVFEYMECNLYQLMKDREKCFSEAE-------VRNWCFQ 108
IV+L+ ++ L V +Y+ +Y++ + +S A+ V+ + +Q
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ 166
Query: 109 VFQGLAYMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREINSRPPFTEYVSTRWYRA 166
+F+ LAY+H G HRD+KP+NLL+ DT +K+ DFG A+++ P Y+ +R+YRA
Sbjct: 167 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 226
Query: 167 PEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADG 226
PE++ + Y+S +D+W+ G ++AEL+ +P+FPG S D++ +I V+GTPT++ +
Sbjct: 227 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE- 285
Query: 227 LLLARAINYKFPQLVGVP-LSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ +KFPQ+ P V P +A++L + L + P+ R T EA H F
Sbjct: 286 -MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 341
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 170/295 (57%), Gaps = 27/295 (9%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
Y K +G+G+FG V++A SGE+VAIKK+ + ++ RE++ +RK+ H NIV
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 155
Query: 64 KLKEVI------RENDILYFVFEYMECNLYQLMKDREKCFSEAE-------VRNWCFQVF 110
+L+ ++ L V +Y+ +Y++ + +S A+ V+ + +Q+F
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQLF 211
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREINSRPPFTEYVSTRWYRAPE 168
+ LAY+H G HRD+KP+NLL+ DT +K+ DFG A+++ P Y+ +R+YRAPE
Sbjct: 212 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 271
Query: 169 VLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLL 228
++ + Y+S +D+W+ G ++AEL+ +P+FPG S D++ +I V+GTPT++ + +
Sbjct: 272 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--M 329
Query: 229 LARAINYKFPQLVGVP-LSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+KFPQ+ P V P +A++L + L + P+ R T EA H F
Sbjct: 330 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 384
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 171/297 (57%), Gaps = 31/297 (10%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKM--KKKYYSWEECVNLREVKSLRKMSHPN 61
Y K +G+G+FG V++A SGE+VAIKK+ K++ + RE++ +RK+ H N
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCN 112
Query: 62 IVKLKEVI------RENDILYFVFEYMECNLYQLMKDREKCFSEAE-------VRNWCFQ 108
IV+L+ ++ L V +Y+ +Y++ + +S A+ V+ + +Q
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ 168
Query: 109 VFQGLAYMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREINSRPPFTEYVSTRWYRA 166
+F+ LAY+H G HRD+KP+NLL+ DT +K+ DFG A+++ P Y+ +R+YRA
Sbjct: 169 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 228
Query: 167 PEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADG 226
PE++ + Y+S +D+W+ G ++AEL+ +P+FPG S D++ +I V+GTPT++ +
Sbjct: 229 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE- 287
Query: 227 LLLARAINYKFPQLVGVP-LSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ +KFPQ+ P V P +A++L + L + P+ R T EA H F
Sbjct: 288 -MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 343
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/297 (37%), Positives = 172/297 (57%), Gaps = 24/297 (8%)
Query: 2 ERYKLIKEVGDGTFGSVWRAIS-KQSGEVVAIKKMKKKYYSWEECVNL---REVKSLRKM 57
++Y+ + E+G+G +G V++A K G VA+K+++ + + EE + L REV LR +
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQ--TGEEGMPLSTIREVAVLRHL 68
Query: 58 S---HPNIVKLKEVI------RENDILYFVFEYMECNLYQ-LMKDREKCFSEAEVRNWCF 107
HPN+V+L +V RE L VFE+++ +L L K E +++ F
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETK-LTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 108 QVFQGLAYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRA 166
Q+ +GL ++H HRDLKP+N+LV S IK+ADFGLAR + + T V T WYRA
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 167 PEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADG 226
PEVLLQS Y++ VD+W++G I AE+ +PLF G+S+ D++ KI VIG P ++ W
Sbjct: 188 PEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 227 LLLAR-AINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ L R A + K Q P+ + ++ L+ +++P+KR +A AL HP+
Sbjct: 247 VALPRQAFHSKSAQ----PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 161/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 139
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI FGLAR + T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE--MTGYVATRWYRAPEIMLNW 197
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 256
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 172/297 (57%), Gaps = 24/297 (8%)
Query: 2 ERYKLIKEVGDGTFGSVWRAIS-KQSGEVVAIKKMKKKYYSWEECV---NLREVKSLRKM 57
++Y+ + E+G+G +G V++A K G VA+K+++ + + EE + +REV LR +
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQ--TGEEGMPLSTIREVAVLRHL 68
Query: 58 S---HPNIVKLKEVI------RENDILYFVFEYMECNLYQ-LMKDREKCFSEAEVRNWCF 107
HPN+V+L +V RE L VFE+++ +L L K E +++ F
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETK-LTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 108 QVFQGLAYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRA 166
Q+ +GL ++H HRDLKP+N+LV S IK+ADFGLAR + + T V T WYRA
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 167 PEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADG 226
PEVLLQS Y++ VD+W++G I AE+ +PLF G+S+ D++ KI VIG P ++ W
Sbjct: 188 PEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 227 LLLAR-AINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ L R A + K Q P+ + ++ L+ +++P+KR +A AL HP+
Sbjct: 247 VALPRQAFHSKSAQ----PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 171/297 (57%), Gaps = 31/297 (10%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKM--KKKYYSWEECVNLREVKSLRKMSHPN 61
Y K +G+G+FG V++A SGE+VAIKK+ K++ + RE++ +RK+ H N
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCN 108
Query: 62 IVKLKEVI------RENDILYFVFEYMECNLYQLMKDREKCFSEAE-------VRNWCFQ 108
IV+L+ ++ L V +Y+ +Y++ + +S A+ V+ + +Q
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ 164
Query: 109 VFQGLAYMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREINSRPPFTEYVSTRWYRA 166
+F+ LAY+H G HRD+KP+NLL+ DT +K+ DFG A+++ P Y+ +R+YRA
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 224
Query: 167 PEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADG 226
PE++ + Y+S +D+W+ G ++AEL+ +P+FPG S D++ +I V+GTPT++ +
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE- 283
Query: 227 LLLARAINYKFPQLVGVP-LSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ +KFPQ+ P V P +A++L + L + P+ R T EA H F
Sbjct: 284 -MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 339
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 169/291 (58%), Gaps = 19/291 (6%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
Y K +G+G+FG V++A SGE+VAIKK+ + ++ RE++ +RK+ H NIV
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 64 KLKEVI----RENDILYF--VFEYMECNLYQLMKD---REKCFSEAEVRNWCFQVFQGLA 114
+L+ + D++Y V +Y+ +Y++ + ++ V+ + +Q+F+ LA
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 115 YMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQ 172
Y+H G HRD+KP+NLL+ DT +K+ DFG A+++ P + +R+YRAPE++
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
+ Y+S +D+W+ G ++AEL+ +P+FPG S D++ +I V+GTPT++ + +
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 254
Query: 233 INYKFPQLVGVP-LSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+KFPQ+ P V P +A++L + L + P+ R T EA H F
Sbjct: 255 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 161/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 139
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + T V+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGXVATRWYRAPEIMLNW 197
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 256
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 171 bits (434), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 161/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 139
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI D GLAR + T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE--MTGYVATRWYRAPEIMLNW 197
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 256
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 161/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 139
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI D GLAR + T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE--MTGYVATRWYRAPEIMLNW 197
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 256
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 171 bits (433), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 161/291 (55%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 139
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI D GLAR + T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE--MTGYVATRWYRAPEIMLNW 197
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 256
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 171 bits (433), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 160/291 (54%), Gaps = 15/291 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
ERY+ + VG G +GSV A ++G VA+KK+ + + S RE++ L+ M H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V + E + +Y V M +L ++K ++ ++ V+ +Q+ +GL
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLK 159
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H HRDLKP NL V++D +KI DFGLAR + V+TRWYRAPE++L
Sbjct: 160 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MXGXVATRWYRAPEIMLNW 217
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y+ VD+W++G IMAEL+T R LFPGT D++ I ++GTP + + A
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSESAR 276
Query: 234 NY--KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
NY Q+ + + + AN AV L+ + D KR TAA+AL H +
Sbjct: 277 NYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 327
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 162/290 (55%), Gaps = 13/290 (4%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
+R + ++ VG G +GSV A + + VA+KK+ + + S RE++ L+ + H
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE 87
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V I + +Y V M +L ++K + S+ V+ +Q+ +GL
Sbjct: 88 NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKS--QALSDEHVQFLVYQLLRGLK 145
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H G HRDLKP N+ V++D+ ++I DFGLAR+ + T YV+TRWYRAPE++L
Sbjct: 146 YIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE--MTGYVATRWYRAPEIMLNW 203
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWAD-GLLLARA 232
Y+ VD+W++G IMAEL+ + LFPG+ D++ +I V+GTP+ + A AR
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHART 263
Query: 233 INYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
P + LS + AN A+ L+ + D +R +AAEAL H +
Sbjct: 264 YIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAY 313
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 171 bits (432), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 166/291 (57%), Gaps = 19/291 (6%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
Y K +G+G+FG V++A SGE+VAIKK+ + + RE++ +RK+ H NIV
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQG-----KAFKNRELQIMRKLDHCNIV 76
Query: 64 KLKEVI------RENDILYFVFEYMECNLYQLMKD---REKCFSEAEVRNWCFQVFQGLA 114
+L+ ++ L V +Y+ +Y++ + ++ V+ + +Q+F+ LA
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 115 YMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQ 172
Y+H G HRD+KP+NLL+ DT +K+ DFG A+++ P Y+ +R+YRAPE++
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
+ Y+S +D+W+ G ++AEL+ +P+FPG S D++ +I V+GTPT++ + +
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 254
Query: 233 INYKFPQLVGVP-LSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ FPQ+ P V P +A++L + L + P+ R T EA H F
Sbjct: 255 TEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 169 bits (429), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 167/291 (57%), Gaps = 19/291 (6%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
Y K +G+G+FG V++A SGE+VAIKK+ + ++ RE++ +RK+ H NIV
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 64 KLKEVI------RENDILYFVFEYMECNLYQLMKD---REKCFSEAEVRNWCFQVFQGLA 114
+L+ ++ L V +Y+ +Y++ + ++ V+ + +Q+F+ LA
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 115 YMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQ 172
Y+H G HRD+KP+NLL+ DT +K+ DFG A+++ P + +R+YRAPE++
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
+ Y+S +D+W+ G ++AEL+ +P+FPG S D++ +I V+GTPT++ + +
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 254
Query: 233 INYKFPQLVGVP-LSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+KFPQ+ P V P +A++L + L + P+ R T EA H F
Sbjct: 255 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 169 bits (429), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 167/291 (57%), Gaps = 19/291 (6%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
Y K +G+G+FG V++A SGE+VAIKK+ + ++ RE++ +RK+ H NIV
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 77
Query: 64 KLKEVI------RENDILYFVFEYMECNLYQLMKD---REKCFSEAEVRNWCFQVFQGLA 114
+L+ ++ L V +Y+ +Y++ + ++ V+ + +Q+F+ LA
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 137
Query: 115 YMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQ 172
Y+H G HRD+KP+NLL+ DT +K+ DFG A+++ P + +R+YRAPE++
Sbjct: 138 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 197
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
+ Y+S +D+W+ G ++AEL+ +P+FPG S D++ +I V+GTPT++ + +
Sbjct: 198 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 255
Query: 233 INYKFPQLVGVP-LSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+KFPQ+ P V P +A++L + L + P+ R T EA H F
Sbjct: 256 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 306
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 169 bits (429), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 167/291 (57%), Gaps = 19/291 (6%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
Y K +G+G+FG V++A SGE+VAIKK+ + ++ RE++ +RK+ H NIV
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 64 KLKEVI------RENDILYFVFEYMECNLYQLMKD---REKCFSEAEVRNWCFQVFQGLA 114
+L+ ++ L V +Y+ +Y++ + ++ V+ + +Q+F+ LA
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 115 YMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQ 172
Y+H G HRD+KP+NLL+ DT +K+ DFG A+++ P + +R+YRAPE++
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
+ Y+S +D+W+ G ++AEL+ +P+FPG S D++ +I V+GTPT++ + +
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 254
Query: 233 INYKFPQLVGVP-LSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+KFPQ+ P V P +A++L + L + P+ R T EA H F
Sbjct: 255 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 161/291 (55%), Gaps = 20/291 (6%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
Y K +G+G+FG V++A +S EV K ++ K + RE++ +R + HPN+V
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKN------RELQIMRIVKHPNVV 95
Query: 64 KLKEVIREND------ILYFVFEYMECNLYQLMKDREKCFSEAE---VRNWCFQVFQGLA 114
LK N L V EY+ +Y+ + K ++ + +Q+ + LA
Sbjct: 96 DLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLA 155
Query: 115 YMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQ 172
Y+H G HRD+KP+NLL+ + +K+ DFG A+ + + P + +R+YRAPE++
Sbjct: 156 YIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFG 215
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
+ Y++ +D+W+ G +MAEL+ +PLFPG S D++ +I V+GTP+++ +
Sbjct: 216 ATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKT--MNPNY 273
Query: 233 INYKFPQLVGVPLS-VLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ +KFPQ+ P S V P DA+ LI+ L + PS R TA EAL HPF
Sbjct: 274 MEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF 324
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 167/291 (57%), Gaps = 19/291 (6%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
Y K +G+G+FG V++A SGE+VAIKK+ + ++ RE++ +RK+ H NIV
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 88
Query: 64 KLKEVI------RENDILYFVFEYMECNLYQLMKD---REKCFSEAEVRNWCFQVFQGLA 114
+L+ ++ L V +Y+ +Y++ + ++ V+ + +Q+F+ LA
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 115 YMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQ 172
Y+H G HRD+KP+NLL+ DT +K+ DFG A+++ P + +R+YRAPE++
Sbjct: 149 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 208
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
+ Y+S +D+W+ G ++AEL+ +P+FPG S D++ +I V+GTPT++ + +
Sbjct: 209 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 266
Query: 233 INYKFPQLVGVP-LSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+KFPQ+ P V P +A++L + L + P+ R T EA H F
Sbjct: 267 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 317
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 170/297 (57%), Gaps = 31/297 (10%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKM--KKKYYSWEECVNLREVKSLRKMSHPN 61
Y K +G+G+FG V++A SGE+VAIKK+ K++ + RE++ +RK+ H N
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCN 86
Query: 62 IVKLKEVI------RENDILYFVFEYMECNLYQLMKDREKCFSEAE-------VRNWCFQ 108
IV+L+ ++ L V +Y+ +Y++ + +S A+ V+ + +Q
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ 142
Query: 109 VFQGLAYMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREINSRPPFTEYVSTRWYRA 166
+F+ LAY+H G HRD+KP+NLL+ DT +K+ DFG A+++ P + +R+YRA
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 202
Query: 167 PEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADG 226
PE++ + Y+S +D+W+ G ++AEL+ +P+FPG S D++ +I V+GTPT++ +
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE- 261
Query: 227 LLLARAINYKFPQLVGVP-LSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ +KFPQ+ P V P +A++L + L + P+ R T EA H F
Sbjct: 262 -MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 317
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 168/293 (57%), Gaps = 23/293 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKM--KKKYYSWEECVNLREVKSLRKMSHPN 61
Y K +G+G+FG V++A SGE+VAIKK+ K++ + RE++ +RK+ H N
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCN 93
Query: 62 IVKLKEVI------RENDILYFVFEYMECNLYQLMKD---REKCFSEAEVRNWCFQVFQG 112
IV+L+ ++ L V +Y+ +Y++ + ++ V+ + +Q+F+
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 153
Query: 113 LAYMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
LAY+H G HRD+KP+NLL+ DT +K+ DFG A+++ P + +R+YRAPE++
Sbjct: 154 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 213
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ Y+S +D+W+ G ++AEL+ +P+FPG S D++ +I V+GTPT++ + +
Sbjct: 214 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNP 271
Query: 231 RAINYKFPQLVGVP-LSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+KFPQ+ P V P +A++L + L + P+ R T EA H F
Sbjct: 272 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 324
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 162/290 (55%), Gaps = 13/290 (4%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
+R + ++ VG G +GSV A + + VA+KK+ + + S RE++ L+ + H
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE 87
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V I + +Y V M +L ++K + S+ V+ +Q+ +GL
Sbjct: 88 NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC--QALSDEHVQFLVYQLLRGLK 145
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H G HRDLKP N+ V++D+ ++I DFGLAR+ + T YV+TRWYRAPE++L
Sbjct: 146 YIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE--MTGYVATRWYRAPEIMLNW 203
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWAD-GLLLARA 232
Y+ VD+W++G IMAEL+ + LFPG+ D++ +I V+GTP+ + A AR
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHART 263
Query: 233 INYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
P + LS + AN A+ L+ + D +R +AAEAL H +
Sbjct: 264 YIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAY 313
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 165/291 (56%), Gaps = 19/291 (6%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
Y K +G+G+FG V++A SGE+VAIKK+ + + RE++ +RK+ H NIV
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQG-----KAFKNRELQIMRKLDHCNIV 76
Query: 64 KLKEVI------RENDILYFVFEYMECNLYQLMKD---REKCFSEAEVRNWCFQVFQGLA 114
+L+ ++ L V +Y+ +Y++ + ++ V+ + +Q+F+ LA
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 115 YMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQ 172
Y+H G HRD+KP+NLL+ DT +K+ DFG A+++ P + +R+YRAPE++
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
+ Y+S +D+W+ G ++AEL+ +P+FPG S D++ +I V+GTPT++ + +
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 254
Query: 233 INYKFPQLVGVP-LSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ FPQ+ P V P +A++L + L + P+ R T EA H F
Sbjct: 255 TEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 170/297 (57%), Gaps = 31/297 (10%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKM--KKKYYSWEECVNLREVKSLRKMSHPN 61
Y K +G+G+FG V++A SGE+VAIKK+ K++ + RE++ +RK+ H N
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCN 108
Query: 62 IVKLKEVI------RENDILYFVFEYMECNLYQLMKDREKCFSEAE-------VRNWCFQ 108
IV+L+ ++ L V +Y+ +Y++ + +S A+ V+ + +Q
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ 164
Query: 109 VFQGLAYMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREINSRPPFTEYVSTRWYRA 166
+F+ LAY+H G HRD+KP+NLL+ DT +K+ DFG A+++ P + +R+YRA
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 224
Query: 167 PEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADG 226
PE++ + Y+S +D+W+ G ++AEL+ +P+FPG S D++ +I V+GTPT++ +
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE- 283
Query: 227 LLLARAINYKFPQLVGVP-LSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ +KFPQ+ P V P +A++L + L + P+ R T EA H F
Sbjct: 284 -MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 339
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 167/291 (57%), Gaps = 19/291 (6%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
Y K +G+G+FG V++A SGE+VAIKK+ + ++ RE++ +RK+ H NIV
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 80
Query: 64 KLKEVI------RENDILYFVFEYMECNLYQLMKD---REKCFSEAEVRNWCFQVFQGLA 114
+L+ ++ L V +Y+ +Y++ + ++ V+ + +Q+F+ LA
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 140
Query: 115 YMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQ 172
Y+H G HRD+KP+NLL+ DT +K+ DFG A+++ P + +R+YRAPE++
Sbjct: 141 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 200
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
+ Y+S +D+W+ G ++AEL+ +P+FPG S D++ +I V+GTPT++ + +
Sbjct: 201 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 258
Query: 233 INYKFPQLVGVP-LSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+KFPQ+ P V P +A++L + L + P+ R T EA H F
Sbjct: 259 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 309
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 168/293 (57%), Gaps = 23/293 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKM--KKKYYSWEECVNLREVKSLRKMSHPN 61
Y K +G+G+FG V++A SGE+VAIKK+ K++ + RE++ +RK+ H N
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCN 82
Query: 62 IVKLKEVI------RENDILYFVFEYMECNLYQLMKD---REKCFSEAEVRNWCFQVFQG 112
IV+L+ ++ L V +Y+ +Y++ + ++ V+ + +Q+F+
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 142
Query: 113 LAYMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
LAY+H G HRD+KP+NLL+ DT +K+ DFG A+++ P + +R+YRAPE++
Sbjct: 143 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 202
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ Y+S +D+W+ G ++AEL+ +P+FPG S D++ +I V+GTPT++ + +
Sbjct: 203 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNP 260
Query: 231 RAINYKFPQLVGVP-LSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+KFPQ+ P V P +A++L + L + P+ R T EA H F
Sbjct: 261 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 313
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 161/290 (55%), Gaps = 13/290 (4%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKMSHP 60
+R + ++ VG G +GSV A + + VA+KK+ + + S RE++ L+ + H
Sbjct: 20 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE 79
Query: 61 NIVKLKEV------IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
N++ L +V I + +Y V M +L ++K + S+ V+ +Q+ +GL
Sbjct: 80 NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC--QALSDEHVQFLVYQLLRGLK 137
Query: 115 YMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
Y+H G HRDLKP N+ V++D ++I DFGLAR+ + T YV+TRWYRAPE++L
Sbjct: 138 YIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEE--MTGYVATRWYRAPEIMLNW 195
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWAD-GLLLARA 232
Y+ VD+W++G IMAEL+ + LFPG+ D++ +I V+GTP+ + A AR
Sbjct: 196 MHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHART 255
Query: 233 INYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
P + LS + AN A+ L+ + D +R +AAEAL H +
Sbjct: 256 YIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAY 305
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 167 bits (424), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 156/296 (52%), Gaps = 24/296 (8%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKK-MKKKYYSWEECVNLREVKSLRKMSH 59
ME+Y+ + VG+G++G V + +K +G +VAIKK ++ + + +RE+K L+++ H
Sbjct: 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRH 83
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
N+V L EV ++ Y VFE+++ + ++ V+ + FQ+ G+ + H
Sbjct: 84 ENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH 143
Query: 120 GYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPP-FTEYVSTRWYRAPEVLLQSYLYS 177
HRD+KPEN+LVS+ +K+ DFG AR + + + + V+TRWYRAPE+L+ Y
Sbjct: 144 NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYG 203
Query: 178 SKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLAR--AINY 235
VD+WA+G ++ E+ PLFPG S+ D++Y I +G L+ R +
Sbjct: 204 KAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGN----------LIPRHQELFN 253
Query: 236 KFPQLVGV---------PLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
K P GV PL P ++ + L DP KRP AE L H F
Sbjct: 254 KNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDF 309
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 157 bits (398), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 166/333 (49%), Gaps = 62/333 (18%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSHPNIVKLKEV 68
+G G++G V+ A K + + VAIKK+ + + +C LRE+ L ++ I++L ++
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDL 93
Query: 69 IRENDIL-----YFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFH 123
I +D+L Y V E + +L +L K +E ++ + + G ++H+ G H
Sbjct: 94 IIPDDLLKFDELYIVLEIADSDLKKLFK-TPIFLTEEHIKTILYNLLLGENFIHESGIIH 152
Query: 124 RDLKPENLLVSKD-TIKIADFGLAREINS-----------------------RPPFTEYV 159
RDLKP N L+++D ++K+ DFGLAR INS + T +V
Sbjct: 153 RDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHV 212
Query: 160 STRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLR-----------PLFPGT------ 202
TRWYRAPE++L Y+ +D+W+ G I AEL+ + PLFPG+
Sbjct: 213 VTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLS 272
Query: 203 -----------SEADEIYKICSVIGTPTQDSWADGLLLARAINY--KFPQLVGVPLSVLM 249
S D++ I ++IGTPT+D + + I Y FP + L
Sbjct: 273 PDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKN-INKPEVIKYIKLFPHRKPINLKQKY 331
Query: 250 PSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
PS + D ++L+ S+ ++P+KR T +AL HP+
Sbjct: 332 PSISDDGINLLESMLKFNPNKRITIDQALDHPY 364
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 157 bits (397), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 163/301 (54%), Gaps = 27/301 (8%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-----------LREVK 52
Y + + + G++G+V + + G VAIK++ S VN LRE++
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTV-SDGRTVNILSDSFLCKRVLREIR 81
Query: 53 SLRKMSHPNIVKLKEVIREND-----ILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCF 107
L HPNI+ L+++ + LY V E M +L Q++ D+ S ++ + +
Sbjct: 82 LLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMY 141
Query: 108 QVFQGLAYMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRA 166
+ GL +H+ G HRDL P N+L++ + I I DF LARE + T YV+ RWYRA
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRA 201
Query: 167 PEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADG 226
PE+++Q ++ VDMW+ G +MAE+ + LF G++ +++ KI V+GTP + D
Sbjct: 202 PELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIE---DV 258
Query: 227 LLLA--RAINYKFPQLVGVPL---SVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
++ + A +Y L VP + ++P+A+ A+ LIA + ++P +R + +AL+HP
Sbjct: 259 VMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHP 318
Query: 282 F 282
+
Sbjct: 319 Y 319
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 157 bits (396), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 163/301 (54%), Gaps = 27/301 (8%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-----------LREVK 52
Y + + + G++G+V + + G VAIK++ S VN LRE++
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTV-SDGRTVNILSDSFLCKRVLREIR 81
Query: 53 SLRKMSHPNIVKLKEVIREND-----ILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCF 107
L HPNI+ L+++ + LY V E M +L Q++ D+ S ++ + +
Sbjct: 82 LLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMY 141
Query: 108 QVFQGLAYMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRA 166
+ GL +H+ G HRDL P N+L++ + I I DF LARE + T YV+ RWYRA
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRA 201
Query: 167 PEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADG 226
PE+++Q ++ VDMW+ G +MAE+ + LF G++ +++ KI V+GTP + D
Sbjct: 202 PELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIE---DV 258
Query: 227 LLLA--RAINYKFPQLVGVPL---SVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
++ + A +Y L VP + ++P+A+ A+ LIA + ++P +R + +AL+HP
Sbjct: 259 VMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHP 318
Query: 282 F 282
+
Sbjct: 319 Y 319
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 173/349 (49%), Gaps = 70/349 (20%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSHP 60
+RY++ +G G++G V A K VVAIKK+ + + +C LRE+ L +++H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 61 NIVKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
++VK+ +++ D+ LY V E + + +L + +E ++ + + G+ Y
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFR-TPVYLTELHIKTLLYNLLVGVKY 171
Query: 116 MHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREI------NSRPP-------------- 154
+H G HRDLKP N LV++D ++K+ DFGLAR + NS+ P
Sbjct: 172 VHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFP 231
Query: 155 --------FTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITL----------- 195
T +V TRWYRAPE++L Y+ +D+W++G I AEL+ +
Sbjct: 232 HTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADR 291
Query: 196 RPLFPGTS--------------------EADEIYKICSVIGTPTQDSWADGLLLARAINY 235
PLFPG+S D++ I +++GTP+++ + L A Y
Sbjct: 292 GPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEED-IEALEKEDAKRY 350
Query: 236 --KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
FP+ G L+ P+++ DA+ L+ + ++P+KR T E L HPF
Sbjct: 351 IRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPF 399
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 167/344 (48%), Gaps = 65/344 (18%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSHP 60
+ Y++ +G G++G V+ A K + + VAIKK+ + + +C LRE+ L ++
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 61 NIVKLKEVIRENDIL-----YFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
I++L ++I D+L Y V E + +L +L K +E V+ + + G +
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFK-TPIFLTEQHVKTILYNLLLGEKF 146
Query: 116 MHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----------------------- 151
+H+ G HRDLKP N L+++D ++KI DFGLAR INS
Sbjct: 147 IHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHN 206
Query: 152 ---RPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLR-----------P 197
+ T +V TRWYRAPE++L Y++ +D+W+ G I AEL+ + P
Sbjct: 207 KNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFP 266
Query: 198 LFPGT-----------------SEADEIYKICSVIGTPTQDSWADGLLLARAINY--KFP 238
LFPG+ S D++ I +VIGTP ++ + I Y FP
Sbjct: 267 LFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLK-CITKQEVIKYIKLFP 325
Query: 239 QLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
G+ LS S +K+ + L+ S+ ++ KR T +AL HP+
Sbjct: 326 TRDGIDLSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPY 369
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 150 bits (380), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 158/305 (51%), Gaps = 27/305 (8%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSHP 60
RY +K +G G G V+ A+ + VAIKK+ + + V LRE+K +R++ H
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKI---VLTDPQSVKHALREIKIIRRLDHD 68
Query: 61 NIVKLKEVI--------------RENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWC 106
NIVK+ E++ E + +Y V EYME +L +++ + E R +
Sbjct: 69 NIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLE--QGPLLEEHARLFM 126
Query: 107 FQVFQGLAYMHQRGYFHRDLKPENLLVSKD--TIKIADFGLAREIN----SRPPFTEYVS 160
+Q+ +GL Y+H HRDLKP NL ++ + +KI DFGLAR ++ + +E +
Sbjct: 127 YQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV 186
Query: 161 TRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQ 220
T+WYR+P +LL Y+ +DMWA G I AE++T + LF G E +++ I I +
Sbjct: 187 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHE 246
Query: 221 DSWADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQH 280
+ + L + PL+ L+P +++AV + + ++ P R TA EAL H
Sbjct: 247 EDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306
Query: 281 PFSRV 285
P+ +
Sbjct: 307 PYMSI 311
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 60 PNIVKL------KEVIRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L ++ + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHER------MSYLLYQML 136
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 137 XGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E++ + LFPG D+ K+ +GTP +
Sbjct: 197 IL-GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 255
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G+ L P + NK A L++ + DP+KR + +A
Sbjct: 256 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 315
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 316 LQHPYINV 323
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 152/308 (49%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 60 PNIVKLKEV------IRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L V + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER------MSYLLYQML 136
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E+I LFPGT D+ K+ +GTP+ +
Sbjct: 197 IL-GMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPT 255
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G L P NK A L++ + D SKR + EA
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 316 LQHPYINV 323
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 60 PNIVKL------KEVIRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L ++ + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHER------MSYLLYQML 136
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E++ + LFPG D+ K+ +GTP +
Sbjct: 197 IL-GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 255
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G+ L P + NK A L++ + DP+KR + +A
Sbjct: 256 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 315
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 316 LQHPYINV 323
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 60 PNIVKL------KEVIRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L ++ + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHER------MSYLLYQML 129
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 130 XGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 189
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E++ + LFPG D+ K+ +GTP +
Sbjct: 190 IL-GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 248
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G+ L P + NK A L++ + DP+KR + +A
Sbjct: 249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 308
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 309 LQHPYINV 316
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSH 59
++RY+ +K +G G G V A G VA+KK+ + + + RE+ L+ ++H
Sbjct: 21 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH 80
Query: 60 PNIVKL------KEVIRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L ++ + E +Y V E M+ NL Q++ D E+ + +Q+
Sbjct: 81 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHER------MSYLLYQML 134
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR ++ T YV TR+YRAPEV
Sbjct: 135 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEV 194
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM EL+ +F GT D+ K+ +GTP+ + A
Sbjct: 195 IL-GMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPT 253
Query: 230 ARAINYKFPQLVGVPLSVLMPS------ANKDAV------SLIASLCSWDPSKRPTAAEA 277
R P G+ L P + +D + L++ + DP KR + EA
Sbjct: 254 VRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEA 313
Query: 278 LQHPFSRV 285
L+HP+ V
Sbjct: 314 LRHPYITV 321
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 152/308 (49%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 60 PNIVKLKEV------IRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L V + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER------MSYLLYQML 136
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E+I LFPGT D+ K+ +GTP+ +
Sbjct: 197 IL-GMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPT 255
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G L P NK A L++ + D SKR + EA
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 316 LQHPYINV 323
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 PNIVKL------KEVIRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L ++ + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHER------MSYLLYQML 136
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 137 XGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E++ + LFPG D+ K+ +GTP +
Sbjct: 197 IL-GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 255
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G+ L P + NK A L++ + DP+KR + +A
Sbjct: 256 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 315
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 316 LQHPYINV 323
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 152/308 (49%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 60 PNIVKLKEV------IRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L V + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER------MSYLLYQML 136
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E+I LFPGT D+ K+ +GTP+ +
Sbjct: 197 IL-GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPT 255
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G L P NK A L++ + D SKR + EA
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 316 LQHPYINV 323
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 60 PNIVKL------KEVIRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L ++ + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER------MSYLLYQML 136
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E++ + LFPG D+ K+ +GTP +
Sbjct: 197 IL-GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 255
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G+ L P + NK A L++ + DP+KR + +A
Sbjct: 256 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 315
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 316 LQHPYINV 323
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 147 bits (371), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 152/308 (49%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 60 PNIVKLKEV------IRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L V + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER------MSYLLYQML 136
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E+I LFPGT D+ K+ +GTP+ +
Sbjct: 197 IL-GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPT 255
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G L P NK A L++ + D SKR + EA
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 316 LQHPYINV 323
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 147 bits (371), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 157/308 (50%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSH 59
++RY+ +K +G G G V A G VA+KK+ + + + RE+ L+ ++H
Sbjct: 23 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH 82
Query: 60 PNIVKL------KEVIRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L ++ + E +Y V E M+ NL Q++ D E+ + +Q+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHER------MSYLLYQML 136
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEV 196
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y++ VD+W++G IM EL+ +F GT D+ K+ +GTP+ + A
Sbjct: 197 IL-GMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPT 255
Query: 230 ARAINYKFPQLVGVPLSVLMPS------ANKDAV------SLIASLCSWDPSKRPTAAEA 277
R P+ G+ L P + +D + L++ + DP KR + EA
Sbjct: 256 VRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEA 315
Query: 278 LQHPFSRV 285
L+HP+ V
Sbjct: 316 LRHPYITV 323
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 152/308 (49%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 PNIVKLKEV------IRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L V + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER------MSYLLYQML 136
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E+I LFPGT D+ K+ +GTP+ +
Sbjct: 197 IL-GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPT 255
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G L P NK A L++ + D SKR + EA
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 316 LQHPYINV 323
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 152/308 (49%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 PNIVKLKEV------IRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L V + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER------MSYLLYQML 136
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E+I LFPGT D+ K+ +GTP+ +
Sbjct: 197 IL-GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPT 255
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G L P NK A L++ + D SKR + EA
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 316 LQHPYINV 323
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 152/308 (49%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 PNIVKLKEV------IRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L V + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER------MSYLLYQML 136
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E+I LFPGT D+ K+ +GTP+ +
Sbjct: 197 IL-GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPT 255
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G L P NK A L++ + D SKR + EA
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 316 LQHPYINV 323
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 PNIVKL------KEVIRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L ++ + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER------MSYLLYQML 136
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E++ + LFPG D+ K+ +GTP +
Sbjct: 197 IL-GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 255
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G+ L P + NK A L++ + DP+KR + +A
Sbjct: 256 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 315
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 316 LQHPYINV 323
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 60 PNIVKL------KEVIRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L ++ + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER------MSYLLYQML 137
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E++ + LFPG D+ K+ +GTP +
Sbjct: 198 IL-GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 256
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G+ L P + NK A L++ + DP+KR + +A
Sbjct: 257 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 316
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 317 LQHPYINV 324
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 PNIVKL------KEVIRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L ++ + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER------MSYLLYQML 136
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E++ + LFPG D+ K+ +GTP +
Sbjct: 197 IL-GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 255
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G+ L P + NK A L++ + DP+KR + +A
Sbjct: 256 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 315
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 316 LQHPYINV 323
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 22 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 81
Query: 60 PNIVKL------KEVIRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L ++ + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 82 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER------MSYLLYQML 135
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 136 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 195
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E++ + LFPG D+ K+ +GTP +
Sbjct: 196 IL-GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 254
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G+ L P + NK A L++ + DP+KR + +A
Sbjct: 255 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 314
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 315 LQHPYINV 322
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 60 PNIVKL------KEVIRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L ++ + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER------MSYLLYQML 174
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 234
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E++ + LFPG D+ K+ +GTP +
Sbjct: 235 IL-GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 293
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G+ L P + NK A L++ + DP+KR + +A
Sbjct: 294 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 353
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 354 LQHPYINV 361
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 60 PNIVKL------KEVIRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L ++ + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER------MSYLLYQML 137
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E++ + LFPG D+ K+ +GTP +
Sbjct: 198 IL-GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 256
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G+ L P + NK A L++ + DP+KR + +A
Sbjct: 257 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 316
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 317 LQHPYINV 324
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 60 PNIVKL------KEVIRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L ++ + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER------MSYLLYQML 129
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 130 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 189
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E++ + LFPG D+ K+ +GTP +
Sbjct: 190 IL-GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 248
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G+ L P + NK A L++ + DP+KR + +A
Sbjct: 249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 308
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 309 LQHPYINV 316
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 60 PNIVKL------KEVIRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L ++ + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER------MSYLLYQML 174
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 234
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E++ + LFPG D+ K+ +GTP +
Sbjct: 235 IL-GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 293
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G+ L P + NK A L++ + DP+KR + +A
Sbjct: 294 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 353
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 354 LQHPYINV 361
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 60 PNIVKL------KEVIRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L ++ + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER------MSYLLYQML 130
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E++ + LFPG D+ K+ +GTP +
Sbjct: 191 IL-GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 249
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G+ L P + NK A L++ + DP+KR + +A
Sbjct: 250 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 309
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 310 LQHPYINV 317
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 60 PNIVKL------KEVIRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L ++ + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER------MSYLLYQML 130
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E++ + LFPG D+ K+ +GTP +
Sbjct: 191 IL-GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 249
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G+ L P + NK A L++ + DP+KR + +A
Sbjct: 250 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 309
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 310 LQHPYINV 317
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 151/308 (49%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 PNIVKLKEV------IRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L V + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER------MSYLLYQML 136
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E+I LFPGT D+ K+ +GTP +
Sbjct: 197 IL-GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 255
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G L P NK A L++ + D SKR + EA
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 316 LQHPYINV 323
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 151/308 (49%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 60 PNIVKLKEV------IRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L V + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 84 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER------MSYLLYQML 137
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E+I LFPGT D+ K+ +GTP +
Sbjct: 198 IL-GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 256
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G L P NK A L++ + D SKR + EA
Sbjct: 257 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 316
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 317 LQHPYINV 324
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 155/299 (51%), Gaps = 17/299 (5%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKK-MKKKYYSWEECVNLREVKSLRKMSH 59
+ +Y+ + ++G GTFG V++A +++G+ VA+KK + + LRE+K L+ + H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 60 PNIVKLKEVIREN--------DILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQ 111
N+V L E+ R +Y VF++ E +L L+ + F+ +E++ +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 136
Query: 112 GLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREI----NSRPP-FTEYVSTRWYR 165
GL Y+H+ HRD+K N+L+++D + K+ADFGLAR NS+P + V T WYR
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 166 APEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSW-- 223
PE+LL Y +D+W G IMAE+ T P+ G +E ++ I + G+ T + W
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 256
Query: 224 ADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
D L + Q V + + A+ LI L DP++R + +AL H F
Sbjct: 257 VDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 315
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 155/299 (51%), Gaps = 17/299 (5%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKK-MKKKYYSWEECVNLREVKSLRKMSH 59
+ +Y+ + ++G GTFG V++A +++G+ VA+KK + + LRE+K L+ + H
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 60 PNIVKLKEVIREN--------DILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQ 111
N+V L E+ R +Y VF++ E +L L+ + F+ +E++ +
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 135
Query: 112 GLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREI----NSRPP-FTEYVSTRWYR 165
GL Y+H+ HRD+K N+L+++D + K+ADFGLAR NS+P + V T WYR
Sbjct: 136 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 195
Query: 166 APEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSW-- 223
PE+LL Y +D+W G IMAE+ T P+ G +E ++ I + G+ T + W
Sbjct: 196 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 255
Query: 224 ADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
D L + Q V + + A+ LI L DP++R + +AL H F
Sbjct: 256 VDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 314
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 157/300 (52%), Gaps = 19/300 (6%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKK--MKKKYYSWEECVNLREVKSLRKMS 58
+ +Y+ + ++G GTFG V++A +++G+ VA+KK M+ + + LRE+K L+ +
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFP-ITALREIKILQLLK 75
Query: 59 HPNIVKLKEVIREN--------DILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVF 110
H N+V L E+ R +Y VF++ E +L L+ + F+ +E++ +
Sbjct: 76 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREI----NSRPP-FTEYVSTRWY 164
GL Y+H+ HRD+K N+L+++D + K+ADFGLAR NS+P + V T WY
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 165 RAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSW- 223
R PE+LL Y +D+W G IMAE+ T P+ G +E ++ I + G+ T + W
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 255
Query: 224 -ADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
D L + Q V + + A+ LI L DP++R + +AL H F
Sbjct: 256 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 315
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 155/299 (51%), Gaps = 17/299 (5%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKK-MKKKYYSWEECVNLREVKSLRKMSH 59
+ +Y+ + ++G GTFG V++A +++G+ VA+KK + + LRE+K L+ + H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 60 PNIVKLKEVIRENDI--------LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQ 111
N+V L E+ R +Y VF++ E +L L+ + F+ +E++ +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 136
Query: 112 GLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREI----NSRPP-FTEYVSTRWYR 165
GL Y+H+ HRD+K N+L+++D + K+ADFGLAR NS+P + V T WYR
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 166 APEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSW-- 223
PE+LL Y +D+W G IMAE+ T P+ G +E ++ I + G+ T + W
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 256
Query: 224 ADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
D L + Q V + + A+ LI L DP++R + +AL H F
Sbjct: 257 VDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 315
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 144 bits (362), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 151/308 (49%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 60 PNIVKLKEV------IRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L V + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 77 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER------MSYLLYQML 130
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E++ + LFPG D+ K+ +GTP +
Sbjct: 191 IL-GMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 249
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G L P NK A L++ + D SKR + EA
Sbjct: 250 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 309
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 310 LQHPYINV 317
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 151/308 (49%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 28 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 87
Query: 60 PNIVKLKEV------IRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L V + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 88 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER------MSYLLYQML 141
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T YV TR+YRAPEV
Sbjct: 142 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 201
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E++ + LFPG D+ K+ +GTP +
Sbjct: 202 IL-GMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 260
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G L P NK A L++ + D SKR + EA
Sbjct: 261 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 320
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 321 LQHPYINV 328
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 150/308 (48%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 25 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 84
Query: 60 PNIVKLKEV------IRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L V + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 85 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER------MSYLLYQML 138
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + +V TR+YRAPEV
Sbjct: 139 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEV 198
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E+I LFPGT D+ K+ +GTP +
Sbjct: 199 IL-GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 257
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G L P NK A L++ + D SKR + EA
Sbjct: 258 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 317
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 318 LQHPYINV 325
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/308 (32%), Positives = 148/308 (48%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 PNIVKLKEV------IRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L V + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER------MSYLLYQML 136
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + T V TR+YRAPEV
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEV 196
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E+I LFPGT D+ K+ +GTP +
Sbjct: 197 IL-GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 255
Query: 230 ARAINYKFPQLVGVPLSVLMPSA------------NKDAVSLIASLCSWDPSKRPTAAEA 277
R P+ G L P A L++ + D SKR + EA
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEA 315
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 316 LQHPYINV 323
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 149/308 (48%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 PNIVKLKEV------IRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L V + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER------MSYLLYQML 136
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + V TR+YRAPEV
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEV 196
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E++ + LFPG D+ K+ +GTP +
Sbjct: 197 IL-GMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 255
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G L P NK A L++ + D SKR + EA
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 316 LQHPYINV 323
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 162/337 (48%), Gaps = 61/337 (18%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKM--KKKYYSWEECVNLREVKSLRKMSH 59
++Y L K +G G+FG V +SG+ A+KK+ +Y + RE+ ++ + H
Sbjct: 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKN-------RELDIMKVLDH 59
Query: 60 PNIVKL-----------------------------------KEVI---RENDILYFVFEY 81
NI+KL K VI +N L + EY
Sbjct: 60 VNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEY 119
Query: 82 MECNLYQLMKD---REKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLV-SKD- 136
+ L++++K + + + +Q+F+ + ++H G HRD+KP+NLLV SKD
Sbjct: 120 VPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDN 179
Query: 137 TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLR 196
T+K+ DFG A+++ P + +R+YRAPE++L + Y+ +D+W++G + ELI +
Sbjct: 180 TLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGK 239
Query: 197 PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFPQLVGVPLSVLMPSANKD- 255
PLF G + D++ +I ++GTPT++ + +FP L ++P
Sbjct: 240 PLFSGETSIDQLVRIIQIMGTPTKEQMIR--MNPHYTEVRFPTLKAKDWRKILPEGTPSL 297
Query: 256 AVSLIASLCSWDPSKRPTAAEALQHPFSRVAFMFHHL 292
A+ L+ + ++P R EA+ HPF F HL
Sbjct: 298 AIDLLEQILRYEPDLRINPYEAMAHPF------FDHL 328
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 148/308 (48%), Gaps = 30/308 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSH 59
++RY+ +K +G G G V A VAIKK+ + + + RE+ ++ ++H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 PNIVKLKEV------IRENDILYFVFEYMECNLYQLMK---DREKCFSEAEVRNWCFQVF 110
NI+ L V + E +Y V E M+ NL Q+++ D E+ + +Q+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER------MSYLLYQML 136
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
G+ ++H G HRDLKP N++V D T+KI DFGLAR + V TR+YRAPEV
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEV 196
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLL 229
+L Y VD+W++G IM E++ + LFPG D+ K+ +GTP
Sbjct: 197 IL-GMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPT 255
Query: 230 ARAINYKFPQLVGVPLSVLMPSA--------NK----DAVSLIASLCSWDPSKRPTAAEA 277
R P+ G L P NK A L++ + D SKR + EA
Sbjct: 256 VRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 278 LQHPFSRV 285
LQHP+ V
Sbjct: 316 LQHPYINV 323
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 163/302 (53%), Gaps = 26/302 (8%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKM--KKKYYSWEECVNLREVKSLRKMS 58
M+R+++ + G GTFG+V K +G VAIKK+ ++ + E L+ ++ L +
Sbjct: 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE----LQIMQDLAVLH 77
Query: 59 HPNIVKLK-------EVIRENDILYFVFEYMECNLYQLMKD---REKCFSEAEVRNWCFQ 108
HPNIV+L+ E R + L V EY+ L++ ++ R+ ++ + FQ
Sbjct: 78 HPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQ 137
Query: 109 VFQGLAYMH--QRGYFHRDLKPENLLVSK--DTIKIADFGLAREINSRPPFTEYVSTRWY 164
+ + + +H HRD+KP N+LV++ T+K+ DFG A++++ P Y+ +R+Y
Sbjct: 138 LIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYY 197
Query: 165 RAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWA 224
RAPE++ + Y++ VD+W++G I AE++ P+F G + A ++++I V+G P+++
Sbjct: 198 RAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLR 257
Query: 225 DGLLLARAINYKFPQLVGVPLSVLMPSAN----KDAVSLIASLCSWDPSKRPTAAEALQH 280
L + G+P S + + K+A L+++L + P +R EAL H
Sbjct: 258 K--LNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315
Query: 281 PF 282
P+
Sbjct: 316 PY 317
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 159/319 (49%), Gaps = 40/319 (12%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSHPN 61
RY+++K +G G+FG V +A + + VA+K ++ +K + + +R ++ LRK N
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 62 ---IVKLKEVIRENDILYFVFEYMECNLYQLMK-DREKCFSEAEVRNWCFQVFQGLAYMH 117
++ + E + + FE + NLY+L+K ++ + FS VR + + Q L +H
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH 217
Query: 118 QRGYFHRDLKPENLLV---SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSY 174
+ H DLKPEN+L+ + IK+ DFG + + R + +R+YRAPEV+L +
Sbjct: 218 KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR--VYTXIQSRFYRAPEVILGAR 275
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQD------------- 221
Y +DMW++G I+AEL+T PL PG E D++ + ++G P+Q
Sbjct: 276 -YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVS 334
Query: 222 -----------SWADGLLLARAINYKFPQLVGVPLSVLMPSANKDA-----VSLIASLCS 265
+ +DG ++ + +L G P S +A K + +
Sbjct: 335 XKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLE 394
Query: 266 WDPSKRPTAAEALQHPFSR 284
WDP+ R T +AL+HP+ R
Sbjct: 395 WDPAVRMTPGQALRHPWLR 413
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 159/319 (49%), Gaps = 40/319 (12%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSHPN 61
RY+++K +G G+FG V +A + + VA+K ++ +K + + +R ++ LRK N
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 62 ---IVKLKEVIRENDILYFVFEYMECNLYQLMK-DREKCFSEAEVRNWCFQVFQGLAYMH 117
++ + E + + FE + NLY+L+K ++ + FS VR + + Q L +H
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH 217
Query: 118 QRGYFHRDLKPENLLV---SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSY 174
+ H DLKPEN+L+ + IK+ DFG + + R + +R+YRAPEV+L +
Sbjct: 218 KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR--VYTXIQSRFYRAPEVILGAR 275
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQD------------- 221
Y +DMW++G I+AEL+T PL PG E D++ + ++G P+Q
Sbjct: 276 -YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVS 334
Query: 222 -----------SWADGLLLARAINYKFPQLVGVPLSVLMPSANKDA-----VSLIASLCS 265
+ +DG ++ + +L G P S +A K + +
Sbjct: 335 XKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLE 394
Query: 266 WDPSKRPTAAEALQHPFSR 284
WDP+ R T +AL+HP+ R
Sbjct: 395 WDPAVRMTPGQALRHPWLR 413
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 144/286 (50%), Gaps = 35/286 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSHP 60
ERY ++ +G G+FG V + + + + A+K + K ++ LREV+ L+K+ HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 61 NIVKLKEVIRENDILYFVFE-YMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
NI+KL E++ ++ Y V E Y L+ + R++ FSE + QVF G+ YMH+
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHKH 140
Query: 120 GYFHRDLKPENLLV---SKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
HRDLKPEN+L+ KD IKI DFGL+ + + T +Y APEVL +
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-- 198
Query: 176 YSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
Y K D+W+ G I+ L++ P F G +E Y I + T +A +
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNE----YDILKRVETG---KYA----------F 241
Query: 236 KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
PQ + + DA LI + ++ PS R TA + L+HP
Sbjct: 242 DLPQWRTI---------SDDAKDLIRKMLTFHPSLRITATQCLEHP 278
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 144/288 (50%), Gaps = 39/288 (13%)
Query: 2 ERYKLIKEVGDGTFGSVWRA---ISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
ERY ++ +G G+FG V + I++Q V I K K + + LREV+ L+K+
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK--NKDTSTILREVELLKKLD 79
Query: 59 HPNIVKLKEVIRENDILYFVFE-YMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI+KL E++ ++ Y V E Y L+ + R++ FSE + QVF G+ YMH
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMH 138
Query: 118 QRGYFHRDLKPENLLV---SKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
+ HRDLKPEN+L+ KD IKI DFGL+ + + T +Y APEVL +
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y K D+W+ G I+ L++ P F G +E D + ++ +A
Sbjct: 199 --YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV-------ETGKYA--------- 240
Query: 234 NYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
+ PQ + + DA LI + ++ PS R TA + L+HP
Sbjct: 241 -FDLPQWRTI---------SDDAKDLIRKMLTFHPSLRITATQCLEHP 278
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 144/288 (50%), Gaps = 39/288 (13%)
Query: 2 ERYKLIKEVGDGTFGSVWRA---ISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
ERY ++ +G G+FG V + I++Q V I K K + + LREV+ L+K+
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK--NKDTSTILREVELLKKLD 79
Query: 59 HPNIVKLKEVIRENDILYFVFE-YMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI+KL E++ ++ Y V E Y L+ + R++ FSE + QVF G+ YMH
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMH 138
Query: 118 QRGYFHRDLKPENLLV---SKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
+ HRDLKPEN+L+ KD IKI DFGL+ + + T +Y APEVL +
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y K D+W+ G I+ L++ P F G +E D + ++ +A
Sbjct: 199 --YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV-------ETGKYA--------- 240
Query: 234 NYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
+ PQ + + DA LI + ++ PS R TA + L+HP
Sbjct: 241 -FDLPQWRTI---------SDDAKDLIRKMLTFHPSLRITATQCLEHP 278
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 157/319 (49%), Gaps = 40/319 (12%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSHPN 61
RY+++K +G G FG V +A + + VA+K ++ +K + + +R ++ LRK N
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 62 ---IVKLKEVIRENDILYFVFEYMECNLYQLMK-DREKCFSEAEVRNWCFQVFQGLAYMH 117
++ + E + + FE + NLY+L+K ++ + FS VR + + Q L +H
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH 217
Query: 118 QRGYFHRDLKPENLLV---SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSY 174
+ H DLKPEN+L+ + IK+ DFG + + R + +R+YRAPEV+L +
Sbjct: 218 KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR--VYXXIQSRFYRAPEVILGAR 275
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQD------------- 221
Y +DMW++G I+AEL+T PL PG E D++ + ++G P Q
Sbjct: 276 -YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLLDASKRAKNFVS 334
Query: 222 -----------SWADGLLLARAINYKFPQLVGVPLSVLMPSANKDA-----VSLIASLCS 265
+ +DG ++ + +L G P S +A K + +
Sbjct: 335 XKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLE 394
Query: 266 WDPSKRPTAAEALQHPFSR 284
WDP+ R T +AL+HP+ R
Sbjct: 395 WDPAVRMTPGQALRHPWLR 413
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 154/313 (49%), Gaps = 43/313 (13%)
Query: 9 EVGDGTFGSVWRAISKQSGEVV--AIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLK 66
+VG GT+G V++A K + A+K+++ S C RE+ LR++ HPN++ L+
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSAC---REIALLRELKHPNVISLQ 84
Query: 67 EVI--RENDILYFVFEYMECNLYQLMK--------DREKCFSEAEVRNWCFQVFQGLAYM 116
+V + ++ +F+Y E +L+ ++K + V++ +Q+ G+ Y+
Sbjct: 85 KVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL 144
Query: 117 HQRGYFHRDLKPENLLV-----SKDTIKIADFGLAREINS--RP--PFTEYVSTRWYRAP 167
H HRDLKP N+LV + +KIAD G AR NS +P V T WYRAP
Sbjct: 145 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 204
Query: 168 EVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEA---------DEIYKICSVIGTP 218
E+LL + Y+ +D+WA+G I AEL+T P+F E D++ +I +V+G P
Sbjct: 205 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFP 264
Query: 219 TQDSWAD-------GLLLA--RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPS 269
W D L+ R Y L+ + + A L+ L + DP
Sbjct: 265 ADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKY-MEKHKVKPDSKAFHLLQKLLTMDPI 323
Query: 270 KRPTAAEALQHPF 282
KR T+ +A+Q P+
Sbjct: 324 KRITSEQAMQDPY 336
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 145/287 (50%), Gaps = 35/287 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
ME+Y ++++G+G+FG S + G IK++ + S E + REV L M H
Sbjct: 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKH 82
Query: 60 PNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKC-FSEAEVRNWCFQVFQGLAYMH 117
PNIV+ +E EN LY V +Y E +L++ + ++ F E ++ +W Q+ L ++H
Sbjct: 83 PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH 142
Query: 118 QRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEY-VSTRWYRAPEVLLQSYL 175
R HRD+K +N+ ++KD T+++ DFG+AR +NS + T +Y +PE+ ++
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEI-CENKP 201
Query: 176 YSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
Y++K D+WA+G ++ EL TL+ F S + + KI S P +++Y
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPV------------SLHY 249
Query: 236 KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ D SL++ L +P RP+ L+ F
Sbjct: 250 SY-----------------DLRSLVSQLFKRNPRDRPSVNSILEKGF 279
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 147/299 (49%), Gaps = 38/299 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSHP 60
+ Y + +E+G G F V R + K +G A K + K S + L RE + RK+ HP
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 61 NIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
NIV+L + I+E Y VF+ + L++ + RE +SEA+ + Q+ + +AY H
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSN 124
Query: 120 GYFHRDLKPENLLVSKD----TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
G HR+LKPENLL++ +K+ADFGLA E+N + + T Y +PEVL +
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD-P 183
Query: 176 YSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
YS VD+WA G I+ L+ P F + +Y + A A +Y
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPF-WDEDQHRLY----------------AQIKAGAYDY 226
Query: 236 KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF----SRVAFMFH 290
P+ + +A SLI S+ + +P KR TA +AL+ P+ RVA H
Sbjct: 227 PSPE---------WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIH 276
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 147/299 (49%), Gaps = 38/299 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSHP 60
+ Y + +E+G G F V R + K +G A K + K S + L RE + RK+ HP
Sbjct: 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 88
Query: 61 NIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
NIV+L + I+E Y VF+ + L++ + RE +SEA+ + Q+ + +AY H
Sbjct: 89 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSN 147
Query: 120 GYFHRDLKPENLLVSKD----TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
G HR+LKPENLL++ +K+ADFGLA E+N + + T Y +PEVL +
Sbjct: 148 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD-P 206
Query: 176 YSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
YS VD+WA G I+ L+ P F + +Y + A A +Y
Sbjct: 207 YSKPVDIWACGVILYILLVGYPPF-WDEDQHRLY----------------AQIKAGAYDY 249
Query: 236 KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF----SRVAFMFH 290
P+ V +A SLI S+ + +P KR TA +AL+ P+ RVA H
Sbjct: 250 PSPEWDTV---------TPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIH 299
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 147/299 (49%), Gaps = 38/299 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSHP 60
+ Y + +E+G G F V R + K +G A K + K S + L RE + RK+ HP
Sbjct: 5 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 64
Query: 61 NIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
NIV+L + I+E Y VF+ + L++ + RE +SEA+ + Q+ + +AY H
Sbjct: 65 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSN 123
Query: 120 GYFHRDLKPENLLVSKD----TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
G HR+LKPENLL++ +K+ADFGLA E+N + + T Y +PEVL +
Sbjct: 124 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD-P 182
Query: 176 YSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
YS VD+WA G I+ L+ P F + +Y + A A +Y
Sbjct: 183 YSKPVDIWACGVILYILLVGYPPF-WDEDQHRLY----------------AQIKAGAYDY 225
Query: 236 KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF----SRVAFMFH 290
P+ + +A SLI S+ + +P KR TA +AL+ P+ RVA H
Sbjct: 226 PSPE---------WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIH 275
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 144/287 (50%), Gaps = 38/287 (13%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK---KYYSWEECVNLREVKSLRKMS 58
+RYK + +G G+FG V K +G+ A+K + K K + +E + LREV+ L+++
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL-LREVQLLKQLD 84
Query: 59 HPNIVKLKEVIRENDILYFVFE-YMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI+KL E + Y V E Y L+ + R++ FSE + QV G+ YMH
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMH 143
Query: 118 QRGYFHRDLKPENLLV---SKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
+ HRDLKPENLL+ SKD I+I DFGL+ + + + T +Y APEVL +
Sbjct: 144 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT 203
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y K D+W+ G I+ L++ P F G +E D + K+ G T
Sbjct: 204 --YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK--GKYT-------------- 245
Query: 234 NYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQH 280
++ PQ V S A LI + ++ PS R +A +AL H
Sbjct: 246 -FELPQWKKVSES---------AKDLIRKMLTYVPSMRISARDALDH 282
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 144/287 (50%), Gaps = 38/287 (13%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK---KYYSWEECVNLREVKSLRKMS 58
+RYK + +G G+FG V K +G+ A+K + K K + +E + LREV+ L+++
Sbjct: 50 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL-LREVQLLKQLD 108
Query: 59 HPNIVKLKEVIRENDILYFVFE-YMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI+KL E + Y V E Y L+ + R++ FSE + QV G+ YMH
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMH 167
Query: 118 QRGYFHRDLKPENLLV---SKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
+ HRDLKPENLL+ SKD I+I DFGL+ + + + T +Y APEVL +
Sbjct: 168 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT 227
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y K D+W+ G I+ L++ P F G +E D + K+ G T
Sbjct: 228 --YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK--GKYT-------------- 269
Query: 234 NYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQH 280
++ PQ V S A LI + ++ PS R +A +AL H
Sbjct: 270 -FELPQWKKVSES---------AKDLIRKMLTYVPSMRISARDALDH 306
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 144/287 (50%), Gaps = 38/287 (13%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK---KYYSWEECVNLREVKSLRKMS 58
+RYK + +G G+FG V K +G+ A+K + K K + +E + LREV+ L+++
Sbjct: 49 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL-LREVQLLKQLD 107
Query: 59 HPNIVKLKEVIRENDILYFVFE-YMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI+KL E + Y V E Y L+ + R++ FSE + QV G+ YMH
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMH 166
Query: 118 QRGYFHRDLKPENLLV---SKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
+ HRDLKPENLL+ SKD I+I DFGL+ + + + T +Y APEVL +
Sbjct: 167 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT 226
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y K D+W+ G I+ L++ P F G +E D + K+ G T
Sbjct: 227 --YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK--GKYT-------------- 268
Query: 234 NYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQH 280
++ PQ V S A LI + ++ PS R +A +AL H
Sbjct: 269 -FELPQWKKVSES---------AKDLIRKMLTYVPSMRISARDALDH 305
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 143/287 (49%), Gaps = 34/287 (11%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSHP 60
+ Y + +E+G G F V R + K +G A K + K S + L RE + RK+ HP
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 61 NIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
NIV+L + I+E Y VF+ + L++ + RE +SEA+ + Q+ + +AY H
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSN 124
Query: 120 GYFHRDLKPENLLVSKD----TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
G HR+LKPENLL++ +K+ADFGLA E+N + + T Y +PEVL +
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD-P 183
Query: 176 YSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
YS VD+WA G I+ L+ P F + +Y + A A +Y
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPF-WDEDQHRLY----------------AQIKAGAYDY 226
Query: 236 KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
P+ + +A SLI S+ + +P KR TA +AL+ P+
Sbjct: 227 PSPE---------WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW 264
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 144/287 (50%), Gaps = 38/287 (13%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK---KYYSWEECVNLREVKSLRKMS 58
+RYK + +G G+FG V K +G+ A+K + K K + +E + LREV+ L+++
Sbjct: 32 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL-LREVQLLKQLD 90
Query: 59 HPNIVKLKEVIRENDILYFVFE-YMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI+KL E + Y V E Y L+ + R++ FSE + QV G+ YMH
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMH 149
Query: 118 QRGYFHRDLKPENLLV---SKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
+ HRDLKPENLL+ SKD I+I DFGL+ + + + T +Y APEVL +
Sbjct: 150 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT 209
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y K D+W+ G I+ L++ P F G +E D + K+ G T
Sbjct: 210 --YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK--GKYT-------------- 251
Query: 234 NYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQH 280
++ PQ V S A LI + ++ PS R +A +AL H
Sbjct: 252 -FELPQWKKVSES---------AKDLIRKMLTYVPSMRISARDALDH 288
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 137/291 (47%), Gaps = 44/291 (15%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSH 59
+RY+ +K++G G +G V K +G AIK +KK + L EV L+++ H
Sbjct: 21 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 80
Query: 60 PNIVKLKEVIRENDILYFVFE-YMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
PNI+KL E + Y V E Y L+ + R+K FSE + QV G Y+H+
Sbjct: 81 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-FSEVDAAVIMKQVLSGTTYLHK 139
Query: 119 RGYFHRDLKPENLLV---SKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSY 174
HRDLKPENLL+ S+D IKI DFGL+ E + T +Y APEVL +
Sbjct: 140 HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKK- 198
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
Y K D+W+ G I+ L+ P F G ++ + +L R
Sbjct: 199 -YDEKCDVWSCGVILYILLCGYPPFGGQTDQE---------------------ILKRVEK 236
Query: 235 YKF----PQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
KF P V + +A L+ + +++PSKR +A EAL HP
Sbjct: 237 GKFSFDPPDWTQV---------SDEAKQLVKLMLTYEPSKRISAEEALNHP 278
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 137/291 (47%), Gaps = 44/291 (15%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSH 59
+RY+ +K++G G +G V K +G AIK +KK + L EV L+++ H
Sbjct: 4 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 63
Query: 60 PNIVKLKEVIRENDILYFVFE-YMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
PNI+KL E + Y V E Y L+ + R+K FSE + QV G Y+H+
Sbjct: 64 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-FSEVDAAVIMKQVLSGTTYLHK 122
Query: 119 RGYFHRDLKPENLLV---SKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSY 174
HRDLKPENLL+ S+D IKI DFGL+ E + T +Y APEVL +
Sbjct: 123 HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKK- 181
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
Y K D+W+ G I+ L+ P F G ++ + +L R
Sbjct: 182 -YDEKCDVWSCGVILYILLCGYPPFGGQTDQE---------------------ILKRVEK 219
Query: 235 YKF----PQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
KF P V + +A L+ + +++PSKR +A EAL HP
Sbjct: 220 GKFSFDPPDWTQV---------SDEAKQLVKLMLTYEPSKRISAEEALNHP 261
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 146/300 (48%), Gaps = 39/300 (13%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSHP 60
+ Y+L +E+G G F V R + +G+ A K + K S + L RE + R + HP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 61 NIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
NIV+L + I E Y VF+ + L++ + RE +SEA+ + Q+ + + + H
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY-YSEADASHCIQQILESVNHCHLN 122
Query: 120 GYFHRDLKPENLLVSKDT----IKIADFGLAREI-NSRPPFTEYVSTRWYRAPEVLLQSY 174
G HRDLKPENLL++ + +K+ADFGLA E+ + + + T Y +PEVL +
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKD- 181
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
Y VDMWA G I+ L+ P F + +I +A
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQI-------------------KAGA 222
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF----SRVAFMFH 290
Y FP S + +A LI + + +P+KR TA+EAL+HP+ S VA M H
Sbjct: 223 YDFP-------SPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWICQRSTVASMMH 275
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 146/300 (48%), Gaps = 39/300 (13%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSHP 60
+ Y+L +E+G G F V R + +G+ A K + K S + L RE + R + HP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 61 NIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
NIV+L + I E Y VF+ + L++ + RE +SEA+ + Q+ + + + H
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY-YSEADASHCIQQILESVNHCHLN 122
Query: 120 GYFHRDLKPENLLVSKDT----IKIADFGLAREI-NSRPPFTEYVSTRWYRAPEVLLQSY 174
G HRDLKPENLL++ + +K+ADFGLA E+ + + + T Y +PEVL +
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKD- 181
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
Y VDMWA G I+ L+ P F + +I +A
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQI-------------------KAGA 222
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF----SRVAFMFH 290
Y FP S + +A LI + + +P+KR TA+EAL+HP+ S VA M H
Sbjct: 223 YDFP-------SPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWICQRSTVASMMH 275
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 141/287 (49%), Gaps = 38/287 (13%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK---KYYSWEECVNLREVKSLRKMS 58
+RYK + +G G+FG V K +G+ A+K + K K + +E + LREV+ L+++
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL-LREVQLLKQLD 84
Query: 59 HPNIVKLKEVIRENDILYFVFE-YMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI KL E + Y V E Y L+ + R++ FSE + QV G+ Y H
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYXH 143
Query: 118 QRGYFHRDLKPENLLV---SKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
+ HRDLKPENLL+ SKD I+I DFGL+ + + + T +Y APEVL +
Sbjct: 144 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGT 203
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y K D+W+ G I+ L++ P F G +E D + K+ G T
Sbjct: 204 --YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK--GKYT-------------- 245
Query: 234 NYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQH 280
++ PQ V S A LI ++ PS R +A +AL H
Sbjct: 246 -FELPQWKKVSES---------AKDLIRKXLTYVPSXRISARDALDH 282
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 144/298 (48%), Gaps = 39/298 (13%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSHPNI 62
Y+L +E+G G F V R + +G+ A K + K S + L RE + R + HPNI
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 63 VKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGY 121
V+L + I E Y +F+ + L++ + RE +SEA+ + Q+ + + + HQ G
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY-YSEADASHCIQQILEAVLHCHQMGV 142
Query: 122 FHRDLKPENLLVSKD----TIKIADFGLAREI-NSRPPFTEYVSTRWYRAPEVLLQSYLY 176
HRDLKPENLL++ +K+ADFGLA E+ + + + T Y +PEVL + Y
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKD-PY 201
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
VD+WA G I+ L+ P F + +I +A Y
Sbjct: 202 GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQI-------------------KAGAYD 242
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF----SRVAFMFH 290
FP S + +A LI + + +PSKR TAAEAL+HP+ S VA H
Sbjct: 243 FP-------SPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMH 293
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 39/300 (13%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSHP 60
+ Y+L +E+G G F V R + K + A K + K S + L RE + R + HP
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 90
Query: 61 NIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
NIV+L + I E Y VF+ + L++ + RE +SEA+ + Q+ + + ++HQ
Sbjct: 91 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY-YSEADASHCIHQILESVNHIHQH 149
Query: 120 GYFHRDLKPENLLVSKD----TIKIADFGLAREINS-RPPFTEYVSTRWYRAPEVLLQSY 174
HRDLKPENLL++ +K+ADFGLA E+ + + + T Y +PEVL +
Sbjct: 150 DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKD- 208
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
Y VD+WA G I+ L+ P F + +I +A
Sbjct: 209 PYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQI-------------------KAGA 249
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF----SRVAFMFH 290
Y FP S + +A +LI + + +P+KR TA +AL+HP+ S VA M H
Sbjct: 250 YDFP-------SPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWVCQRSTVASMMH 302
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 144/300 (48%), Gaps = 39/300 (13%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSHP 60
+ Y+L +++G G F V R + +G A K + K S + L RE + R + H
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHS 63
Query: 61 NIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
NIV+L + I E Y VF+ + L++ + RE +SEA+ + Q+ + + + HQ
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY-YSEADASHCIQQILEAVLHCHQM 122
Query: 120 GYFHRDLKPENLLVSKD----TIKIADFGLAREI-NSRPPFTEYVSTRWYRAPEVLLQSY 174
G HRDLKPENLL++ +K+ADFGLA E+ + + + T Y +PEVL +
Sbjct: 123 GVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKE- 181
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
Y VD+WA G I+ L+ P F + +I +A
Sbjct: 182 AYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQI-------------------KAGA 222
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF----SRVAFMFH 290
Y FP S + +A +LI + + +P+KR TA EAL+HP+ S VA M H
Sbjct: 223 YDFP-------SPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWVCQRSTVASMMH 275
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 144/300 (48%), Gaps = 39/300 (13%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSHP 60
E Y+L +E+G G F V R + +G+ A + K S + L RE + R + HP
Sbjct: 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHP 70
Query: 61 NIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
NIV+L + I E Y +F+ + L++ + RE +SEA+ + Q+ + + + HQ
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY-YSEADASHCIQQILEAVLHCHQM 129
Query: 120 GYFHRDLKPENLLVSKD----TIKIADFGLAREI-NSRPPFTEYVSTRWYRAPEVLLQSY 174
G HR+LKPENLL++ +K+ADFGLA E+ + + + T Y +PEVL +
Sbjct: 130 GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKD- 188
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
Y VD+WA G I+ L+ P F + +I +A
Sbjct: 189 PYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQI-------------------KAGA 229
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF----SRVAFMFH 290
Y FP S + +A LI + + +PSKR TAAEAL+HP+ S VA H
Sbjct: 230 YDFP-------SPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMH 282
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 156/296 (52%), Gaps = 24/296 (8%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKM-SHP 60
+ Y+L++++G G + V+ AI+ + E V +K +K ++ RE+K L + P
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILK----PVKKNKIKREIKILENLRGGP 92
Query: 61 NIVKLKEVIRE--NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
NI+ L +++++ + VFE++ ++ + + ++ ++R + +++ + L Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHS 149
Query: 119 RGYFHRDLKPENLLVSKD--TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
G HRD+KP N+++ + +++ D+GLA + + V++R+++ PE+L+ +Y
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY 209
Query: 177 SSKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
+DMW++G ++A +I + P F G D++ +I V+GT + D + ++
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI--ELDP 267
Query: 236 KFPQLVGVPL----SVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
+F ++G + S N+ +A+ + L +D R TA EA++HP+
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 142/290 (48%), Gaps = 42/290 (14%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMS 58
+E +K+ +G G+F V+RA S +G VAIK + KK V EVK ++
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 59 HPNIVKLKEVIRENDILYFVFEYM---ECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
HP+I++L +++ +Y V E E N Y +K+R K FSE E R++ Q+ G+ Y
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRY--LKNRVKPFSENEARHFMHQIITGMLY 127
Query: 116 MHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYV--STRWYRAPEVLLQ 172
+H G HRDL NLL++++ IKIADFGLA ++ P Y T Y +PE+ +
Sbjct: 128 LHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQL-KMPHEKHYTLCGTPNYISPEIATR 186
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
S + + D+W++G + L+ RP F T T + + ++LA
Sbjct: 187 S-AHGLESDVWSLGCMFYTLLIGRPPFD----------------TDTVKNTLNKVVLA-- 227
Query: 233 INYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+Y+ P + + +A LI L +P+ R + + L HPF
Sbjct: 228 -DYEMPSFLSI-----------EAKDLIHQLLRRNPADRLSLSSVLDHPF 265
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 108/204 (52%), Gaps = 4/204 (1%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL--REVKSLRKMSHP 60
Y+++K +G+G+FG V A +G+ VA+K + KK + + RE+ LR + HP
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 61 NIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
+I+KL +VI+ D + V EY L+ + R+K SE E R + Q+ + Y H+
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK-MSEQEARRFFQQIISAVEYCHRHK 127
Query: 121 YFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSK 179
HRDLKPENLL+ + +KIADFGL+ + + Y APEV+ +
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 187
Query: 180 VDMWAMGAIMAELITLRPLFPGTS 203
VD+W+ G I+ ++ R F S
Sbjct: 188 VDVWSCGVILYVMLCRRLPFDDES 211
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 108/204 (52%), Gaps = 4/204 (1%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL--REVKSLRKMSHP 60
Y+++K +G+G+FG V A +G+ VA+K + KK + + RE+ LR + HP
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 61 NIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
+I+KL +VI+ D + V EY L+ + R+K SE E R + Q+ + Y H+
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK-MSEQEARRFFQQIISAVEYCHRHK 133
Query: 121 YFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSK 179
HRDLKPENLL+ + +KIADFGL+ + + Y APEV+ +
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 193
Query: 180 VDMWAMGAIMAELITLRPLFPGTS 203
VD+W+ G I+ ++ R F S
Sbjct: 194 VDVWSCGVILYVMLCRRLPFDDES 217
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 108/204 (52%), Gaps = 4/204 (1%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL--REVKSLRKMSHP 60
Y+++K +G+G+FG V A +G+ VA+K + KK + + RE+ LR + HP
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 61 NIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
+I+KL +VI+ D + V EY L+ + R+K SE E R + Q+ + Y H+
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK-MSEQEARRFFQQIISAVEYCHRHK 132
Query: 121 YFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSK 179
HRDLKPENLL+ + +KIADFGL+ + + Y APEV+ +
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 192
Query: 180 VDMWAMGAIMAELITLRPLFPGTS 203
VD+W+ G I+ ++ R F S
Sbjct: 193 VDVWSCGVILYVMLCRRLPFDDES 216
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 108/203 (53%), Gaps = 4/203 (1%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL--REVKSLRKMSHPN 61
Y+++K +G+G+FG V A +G+ VA+K + KK + + RE+ LR + HP+
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 62 IVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGY 121
I+KL +VI+ D + V EY L+ + R+K SE E R + Q+ + Y H+
Sbjct: 66 IIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK-MSEQEARRFFQQIISAVEYCHRHKI 124
Query: 122 FHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKV 180
HRDLKPENLL+ + +KIADFGL+ + + Y APEV+ +V
Sbjct: 125 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEV 184
Query: 181 DMWAMGAIMAELITLRPLFPGTS 203
D+W+ G I+ ++ R F S
Sbjct: 185 DVWSCGVILYVMLCRRLPFDDES 207
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 137/286 (47%), Gaps = 35/286 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSHP 60
E Y+ +K++G G +G V K + AIK ++K S L EV L+ + HP
Sbjct: 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHP 96
Query: 61 NIVKLKEVIRENDILYFVFE-YMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
NI+KL + + Y V E Y L+ + R K F+E + QV G+ Y+H+
Sbjct: 97 NIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK-FNEVDAAVIIKQVLSGVTYLHKH 155
Query: 120 GYFHRDLKPENLLV---SKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
HRDLKPENLL+ KD IKI DFGL+ ++ E + T +Y APEVL +
Sbjct: 156 NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKK-- 213
Query: 176 YSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
Y K D+W++G I+ L+ P F G ++ + + K+ G T DS
Sbjct: 214 YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEK--GKYTFDS------------- 258
Query: 236 KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
P+ V ++ A LI + +D +R +A +AL+HP
Sbjct: 259 --PEWKNV---------SEGAKDLIKQMLQFDSQRRISAQQALEHP 293
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 111/213 (52%), Gaps = 12/213 (5%)
Query: 7 IKEVGDGTFGSVWRAISKQSGEVVAIKKM----KKKYYSWEECVNLREVKSLRKMSHPNI 62
++E+G G+FG+V+ A ++ EVVAIKKM K+ W++ + +EV+ L+K+ HPN
Sbjct: 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDII--KEVRFLQKLRHPNT 116
Query: 63 VKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYF 122
++ + + V EY + L++ +K E E+ QGLAY+H
Sbjct: 117 IQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMI 176
Query: 123 HRDLKPENLLVSK-DTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL--QSYLYSSK 179
HRD+K N+L+S+ +K+ DFG A + P +V T ++ APEV+L Y K
Sbjct: 177 HRDVKAGNILLSEPGLVKLGDFGSASIM---APANXFVGTPYWMAPEVILAMDEGQYDGK 233
Query: 180 VDMWAMGAIMAELITLRPLFPGTSEADEIYKIC 212
VD+W++G EL +P + +Y I
Sbjct: 234 VDVWSLGITCIELAERKPPLFNMNAMSALYHIA 266
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 111/213 (52%), Gaps = 12/213 (5%)
Query: 7 IKEVGDGTFGSVWRAISKQSGEVVAIKKM----KKKYYSWEECVNLREVKSLRKMSHPNI 62
++E+G G+FG+V+ A ++ EVVAIKKM K+ W++ + +EV+ L+K+ HPN
Sbjct: 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDII--KEVRFLQKLRHPNT 77
Query: 63 VKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYF 122
++ + + V EY + L++ +K E E+ QGLAY+H
Sbjct: 78 IQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMI 137
Query: 123 HRDLKPENLLVSK-DTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL--QSYLYSSK 179
HRD+K N+L+S+ +K+ DFG A + P +V T ++ APEV+L Y K
Sbjct: 138 HRDVKAGNILLSEPGLVKLGDFGSASIM---APANXFVGTPYWMAPEVILAMDEGQYDGK 194
Query: 180 VDMWAMGAIMAELITLRPLFPGTSEADEIYKIC 212
VD+W++G EL +P + +Y I
Sbjct: 195 VDVWSLGITCIELAERKPPLFNMNAMSALYHIA 227
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 133/297 (44%), Gaps = 50/297 (16%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS--------------WEECVN 47
E Y ++++G G +G V K AIK +KK + EE N
Sbjct: 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYN 95
Query: 48 LREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWC 106
E+ L+ + HPNI+KL +V + Y V E+ E L++ + +R K F E + N
Sbjct: 96 --EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK-FDECDAANIM 152
Query: 107 FQVFQGLAYMHQRGYFHRDLKPENLLVSKD----TIKIADFGLAREINSRPPFTEYVSTR 162
Q+ G+ Y+H+ HRD+KPEN+L+ IKI DFGL+ + + + T
Sbjct: 153 KQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTA 212
Query: 163 WYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDS 222
+Y APEVL + Y+ K D+W+ G IM L+ P F G ++ D I K+ +
Sbjct: 213 YYIAPEVLKKK--YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFND 270
Query: 223 WADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
W + + +A LI + ++D +KR TA EAL
Sbjct: 271 W--------------------------KNISDEAKELIKLMLTYDYNKRCTAEEALN 301
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 123/228 (53%), Gaps = 13/228 (5%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
M+RY++ +G G+FG V +A + E VAIK +K KK + + + +R ++ + K
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 112
Query: 60 PN---IVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAY 115
IV LK + L VFE + NLY L+++ + S R + Q+ L +
Sbjct: 113 EMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLF 172
Query: 116 MH--QRGYFHRDLKPENLLV---SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+ + H DLKPEN+L+ + IKI DFG + ++ R + + +R+YR+PEVL
Sbjct: 173 LATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR--IYQXIQSRFYRSPEVL 230
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTP 218
L Y +DMW++G I+ E+ T PLF G +E D++ KI V+G P
Sbjct: 231 L-GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 123/228 (53%), Gaps = 13/228 (5%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
M+RY++ +G G+FG V +A + E VAIK +K KK + + + +R ++ + K
Sbjct: 34 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 93
Query: 60 PN---IVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAY 115
IV LK + L VFE + NLY L+++ + S R + Q+ L +
Sbjct: 94 EMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLF 153
Query: 116 MH--QRGYFHRDLKPENLLV---SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+ + H DLKPEN+L+ + IKI DFG + ++ R + + +R+YR+PEVL
Sbjct: 154 LATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR--IYQXIQSRFYRSPEVL 211
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTP 218
L Y +DMW++G I+ E+ T PLF G +E D++ KI V+G P
Sbjct: 212 L-GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 258
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 123/228 (53%), Gaps = 13/228 (5%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
M+RY++ +G G+FG V +A + E VAIK +K KK + + + +R ++ + K
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 112
Query: 60 PN---IVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAY 115
IV LK + L VFE + NLY L+++ + S R + Q+ L +
Sbjct: 113 EMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLF 172
Query: 116 MH--QRGYFHRDLKPENLLV---SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+ + H DLKPEN+L+ + IKI DFG + ++ R + + +R+YR+PEVL
Sbjct: 173 LATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQR--IYQXIQSRFYRSPEVL 230
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTP 218
L Y +DMW++G I+ E+ T PLF G +E D++ KI V+G P
Sbjct: 231 L-GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 157/295 (53%), Gaps = 22/295 (7%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ Y+L++++G G + V+ AI+ + E VA+K +K + ++ +++LR PN
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKK-KIKREIKILENLR--GGPN 93
Query: 62 IVKLKEVIRE--NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
I+ L +++++ + VFE++ ++ + + ++ ++R + +++ + L Y H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSM 150
Query: 120 GYFHRDLKPENLLVSKD--TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
G HRD+KP N+L+ + +++ D+GLA + + V++R+++ PE+L+ +Y
Sbjct: 151 GIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 210
Query: 178 SKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
+DMW++G ++A +I + P F G D++ +I V+GT + D + ++ +
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI--ELDPR 268
Query: 237 FPQLVGVPL----SVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
F ++G + S N+ +A+ + L +D R TA EA++HP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 155/295 (52%), Gaps = 22/295 (7%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ Y+++++VG G + V+ I+ + E IK +K + ++ +++L M PN
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKK-KIKREIKILQNL--MGGPN 87
Query: 62 IVKLKEVIRE--NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
IVKL +++R+ + +FEY+ ++++ ++ ++R + +++ + L Y H +
Sbjct: 88 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQ 144
Query: 120 GYFHRDLKPENLLVSKD--TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
G HRD+KP N+++ + +++ D+GLA + + V++R+++ PE+L+ Y
Sbjct: 145 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 204
Query: 178 SKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
+DMW++G + A +I + P F G D++ KI V+GT + + + + ++ +
Sbjct: 205 YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRI--ELDPQ 262
Query: 237 FPQLVG----VPLSVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
LVG P M + N+ +A+ + L +D +R TA EA+ HP+
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 317
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 156/296 (52%), Gaps = 24/296 (8%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKM-SHP 60
+ Y+++++VG G + V+ I+ + E K + K ++ RE+K L+ + P
Sbjct: 52 DDYEVVRKVGRGKYSEVFEGINVNNNE----KCIIKILKPVKKKKIKREIKILQNLXGGP 107
Query: 61 NIVKLKEVIRE--NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
NIVKL +++R+ + +FEY+ ++++ ++ ++R + +++ + L Y H
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 164
Query: 119 RGYFHRDLKPENLLVSKD--TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+G HRD+KP N+++ + +++ D+GLA + + V++R+++ PE+L+ Y
Sbjct: 165 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDY 224
Query: 177 SSKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
+DMW++G + A +I + P F G D++ KI V+GT +++ + + ++
Sbjct: 225 DYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRI--ELDP 282
Query: 236 KFPQLVG----VPLSVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ LVG P M + N+ +A+ + L +D +R TA EA+ HP+
Sbjct: 283 QLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 338
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSHPNI 62
Y+L+K +G G F V A +G+ VA++ + K + L REV+ ++ ++HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 63 VKLKEVIRENDILYFVFEYM---ECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
VKL EVI LY V EY E Y + R K E E R Q+ + Y HQ+
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK---EKEARAKFRQIVSAVQYCHQK 132
Query: 120 GYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
HRDLK ENLL+ D IKIADFG + E E+ + Y APE+
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGP 192
Query: 179 KVDMWAMGAIMAELITLRPLFPGTS 203
+VD+W++G I+ L++ F G +
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 103/205 (50%), Gaps = 8/205 (3%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSHPNI 62
Y+L+K +G G F V A +G VAIK + K + L REV+ ++ ++HPNI
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 73
Query: 63 VKLKEVIRENDILYFVFEYM---ECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
VKL EVI LY + EY E Y + R K E E R+ Q+ + Y HQ+
Sbjct: 74 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMK---EKEARSKFRQIVSAVQYCHQK 130
Query: 120 GYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
HRDLK ENLL+ D IKIADFG + E + + Y APE+
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGP 190
Query: 179 KVDMWAMGAIMAELITLRPLFPGTS 203
+VD+W++G I+ L++ F G +
Sbjct: 191 EVDVWSLGVILYTLVSGSLPFDGQN 215
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 127/282 (45%), Gaps = 43/282 (15%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVI 69
+G G F V A K++ ++VAIK + KK +E E+ L K+ HPNIV L ++
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 70 RENDILYFVFEYMECNLYQLMKDR--EKCF-SEAEVRNWCFQVFQGLAYMHQRGYFHRDL 126
LY + + + + DR EK F +E + FQV + Y+H G HRDL
Sbjct: 86 ESGGHLYLIMQLVSGG---ELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDL 142
Query: 127 KPENLL---VSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDM 182
KPENLL + +D+ I I+DFGL++ + + T Y APEVL Q YS VD
Sbjct: 143 KPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQK-PYSKAVDC 201
Query: 183 WAMGAIMAELITLRPLFPGTSEA---DEIYKICSVIGTPTQDSWADGLLLARAINYKFPQ 239
W++G I L+ P F ++A ++I K +P D +D
Sbjct: 202 WSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS------------- 248
Query: 240 LVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
A I L DP KR T +ALQHP
Sbjct: 249 ----------------AKDFIRHLMEKDPEKRFTCEQALQHP 274
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 102/205 (49%), Gaps = 8/205 (3%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSHPNI 62
Y+L+K +G G F V A +G VAIK + K + L REV+ ++ ++HPNI
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 63 VKLKEVIRENDILYFVFEYM---ECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
VKL EVI LY + EY E Y + R K E E R+ Q+ + Y HQ+
Sbjct: 77 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMK---EKEARSKFRQIVSAVQYCHQK 133
Query: 120 GYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
HRDLK ENLL+ D IKIADFG + E + Y APE+
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGP 193
Query: 179 KVDMWAMGAIMAELITLRPLFPGTS 203
+VD+W++G I+ L++ F G +
Sbjct: 194 EVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 155/296 (52%), Gaps = 24/296 (8%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKM-SHP 60
+ Y+++++VG G + V+ I+ + E K + K ++ RE+K L+ + P
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE----KCIIKILKPVKKKKIKREIKILQNLXGGP 86
Query: 61 NIVKLKEVIRE--NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
NIVKL +++R+ + +FEY+ ++++ ++ ++R + +++ + L Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 143
Query: 119 RGYFHRDLKPENLLVSKD--TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+G HRD+KP N+++ + +++ D+GLA + + V++R+++ PE+L+ Y
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDY 203
Query: 177 SSKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
+DMW++G + A +I + P F G D++ KI V+GT + + + + ++
Sbjct: 204 DYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRI--ELDP 261
Query: 236 KFPQLVG----VPLSVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ LVG P M + N+ +A+ + L +D +R TA EA+ HP+
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 317
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 157/295 (53%), Gaps = 22/295 (7%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ Y+L++++G G + V+ AI+ + E V +K +K + ++ +++LR PN
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPN 93
Query: 62 IVKLKEVIRE--NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
I+ L +++++ + VFE++ ++ ++ + ++ ++R + +++ + L Y H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLR---QTLTDYDIRFYMYEILKALDYCHSM 150
Query: 120 GYFHRDLKPENLLVSKD--TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
G HRD+KP N+++ + +++ D+GLA + + V++R+++ PE+L+ +Y
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 210
Query: 178 SKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
+DMW++G ++A +I + P F G D++ +I V+GT + D + ++ +
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI--ELDPR 268
Query: 237 FPQLVGVPL----SVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
F ++G + S N+ +A+ + L +D R TA EA++HP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 155/296 (52%), Gaps = 24/296 (8%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKM-SHP 60
+ Y+++++VG G + V+ I+ + E K + K ++ RE+K L+ + P
Sbjct: 33 DDYEVVRKVGRGKYSEVFEGINVNNNE----KCIIKILKPVKKKKIKREIKILQNLCGGP 88
Query: 61 NIVKLKEVIRE--NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
NIVKL +++R+ + +FEY+ ++++ ++ ++R + +++ + L Y H
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 145
Query: 119 RGYFHRDLKPENLLVSKD--TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+G HRD+KP N+++ + +++ D+GLA + + V++R+++ PE+L+ Y
Sbjct: 146 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDY 205
Query: 177 SSKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
+DMW++G + A +I + P F G D++ KI V+GT + + + + ++
Sbjct: 206 DYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRI--ELDP 263
Query: 236 KFPQLVG----VPLSVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ LVG P M + N+ +A+ + L +D +R TA EA+ HP+
Sbjct: 264 QLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 319
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 103/205 (50%), Gaps = 8/205 (3%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSHPNI 62
Y+L+K +G G F V A +G+ VA+K + K + L REV+ ++ ++HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 63 VKLKEVIRENDILYFVFEYM---ECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
VKL EVI LY V EY E Y + R K E E R Q+ + Y HQ+
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK---EKEARAKFRQIVSAVQYCHQK 132
Query: 120 GYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
HRDLK ENLL+ D IKIADFG + E + + Y APE+
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 179 KVDMWAMGAIMAELITLRPLFPGTS 203
+VD+W++G I+ L++ F G +
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 103/205 (50%), Gaps = 8/205 (3%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSHPNI 62
Y+L+K +G G F V A +G+ VA+K + K + L REV+ ++ ++HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 63 VKLKEVIRENDILYFVFEYM---ECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
VKL EVI LY V EY E Y + R K E E R Q+ + Y HQ+
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK---EKEARAKFRQIVSAVQYCHQK 132
Query: 120 GYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
HRDLK ENLL+ D IKIADFG + E + + Y APE+
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 179 KVDMWAMGAIMAELITLRPLFPGTS 203
+VD+W++G I+ L++ F G +
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 155/296 (52%), Gaps = 24/296 (8%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKM-SHP 60
+ Y+++++VG G + V+ I+ + E K + K ++ RE+K L+ + P
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE----KCIIKILKPVKKKKIKREIKILQNLXGGP 86
Query: 61 NIVKLKEVIRE--NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
NIVKL +++R+ + +FEY+ ++++ ++ ++R + +++ + L Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 143
Query: 119 RGYFHRDLKPENLLVSKD--TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+G HRD+KP N+++ + +++ D+GLA + + V++R+++ PE+L+ Y
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDY 203
Query: 177 SSKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
+DMW++G + A +I + P F G D++ KI V+GT + + + + ++
Sbjct: 204 DYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRI--ELDP 261
Query: 236 KFPQLVG----VPLSVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ LVG P M + N+ +A+ + L +D +R TA EA+ HP+
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 317
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 155/296 (52%), Gaps = 24/296 (8%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKM-SHP 60
+ Y+++++VG G + V+ I+ + E K + K ++ RE+K L+ + P
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNE----KCIIKILKPVKKKKIKREIKILQNLXGGP 87
Query: 61 NIVKLKEVIRE--NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
NIVKL +++R+ + +FEY+ ++++ ++ ++R + +++ + L Y H
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 144
Query: 119 RGYFHRDLKPENLLVSKD--TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+G HRD+KP N+++ + +++ D+GLA + + V++R+++ PE+L+ Y
Sbjct: 145 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDY 204
Query: 177 SSKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
+DMW++G + A +I + P F G D++ KI V+GT + + + + ++
Sbjct: 205 DYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRI--ELDP 262
Query: 236 KFPQLVG----VPLSVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ LVG P M + N+ +A+ + L +D +R TA EA+ HP+
Sbjct: 263 QLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 318
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 155/296 (52%), Gaps = 24/296 (8%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKM-SHP 60
+ Y+++++VG G + V+ I+ + E K + K ++ RE+K L+ + P
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE----KCIIKILKPVKKKKIKREIKILQNLCGGP 86
Query: 61 NIVKLKEVIRE--NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
NIVKL +++R+ + +FEY+ ++++ ++ ++R + +++ + L Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 143
Query: 119 RGYFHRDLKPENLLVSKD--TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+G HRD+KP N+++ + +++ D+GLA + + V++R+++ PE+L+ Y
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDY 203
Query: 177 SSKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
+DMW++G + A +I + P F G D++ KI V+GT + + + + ++
Sbjct: 204 DYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRI--ELDP 261
Query: 236 KFPQLVG----VPLSVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ LVG P M + N+ +A+ + L +D +R TA EA+ HP+
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 317
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 155/296 (52%), Gaps = 24/296 (8%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKM-SHP 60
+ Y+++++VG G + V+ I+ + E K + K ++ RE+K L+ + P
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNE----KCIIKILKPVKKKKIKREIKILQNLCGGP 87
Query: 61 NIVKLKEVIRE--NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
NIVKL +++R+ + +FEY+ ++++ ++ ++R + +++ + L Y H
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 144
Query: 119 RGYFHRDLKPENLLVSKD--TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+G HRD+KP N+++ + +++ D+GLA + + V++R+++ PE+L+ Y
Sbjct: 145 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDY 204
Query: 177 SSKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
+DMW++G + A +I + P F G D++ KI V+GT + + + + ++
Sbjct: 205 DYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRI--ELDP 262
Query: 236 KFPQLVG----VPLSVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ LVG P M + N+ +A+ + L +D +R TA EA+ HP+
Sbjct: 263 QLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 318
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 155/296 (52%), Gaps = 24/296 (8%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKM-SHP 60
+ Y+++++VG G + V+ I+ + E K + K ++ RE+K L+ + P
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE----KCIIKILKPVKKKKIKREIKILQNLCGGP 86
Query: 61 NIVKLKEVIRE--NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
NIVKL +++R+ + +FEY+ ++++ ++ ++R + +++ + L Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 143
Query: 119 RGYFHRDLKPENLLVSKD--TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+G HRD+KP N+++ + +++ D+GLA + + V++R+++ PE+L+ Y
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDY 203
Query: 177 SSKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
+DMW++G + A +I + P F G D++ KI V+GT + + + + ++
Sbjct: 204 DYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRI--ELDP 261
Query: 236 KFPQLVG----VPLSVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ LVG P M + N+ +A+ + L +D +R TA EA+ HP+
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 317
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 155/296 (52%), Gaps = 24/296 (8%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKM-SHP 60
+ Y+++++VG G + V+ I+ + E K + K ++ RE+K L+ + P
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE----KCIIKILKPVKKKKIKREIKILQNLXGGP 86
Query: 61 NIVKLKEVIRE--NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
NIVKL +++R+ + +FEY+ ++++ ++ ++R + +++ + L Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 143
Query: 119 RGYFHRDLKPENLLVSKD--TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+G HRD+KP N+++ + +++ D+GLA + + V++R+++ PE+L+ Y
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDY 203
Query: 177 SSKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
+DMW++G + A +I + P F G D++ KI V+GT + + + + ++
Sbjct: 204 DYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRI--ELDP 261
Query: 236 KFPQLVG----VPLSVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ LVG P M + N+ +A+ + L +D +R TA EA+ HP+
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 317
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 124/284 (43%), Gaps = 43/284 (15%)
Query: 8 KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKE 67
+++G G FG V + SG IK + K E++ L+ + HPNI+K+ E
Sbjct: 28 RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFE 87
Query: 68 VIRENDILYFVFEYMECNLYQLM------KDREKCFSEAEVRNWCFQVFQGLAYMHQRGY 121
V + +Y V E C +L+ + R K SE V Q+ LAY H +
Sbjct: 88 VFEDYHNMYIVMET--CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHV 145
Query: 122 FHRDLKPENLLVSKDT-----IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
H+DLKPEN+L +DT IKI DFGLA S T T Y APEV + +
Sbjct: 146 VHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTF 204
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
K D+W+ G +M L+T F GTS + + + YK
Sbjct: 205 --KCDIWSAGVVMYFLLTGCLPFTGTSLEE----------------------VQQKATYK 240
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQH 280
P V L P AV L+ + + DP +RP+AA+ L H
Sbjct: 241 EPNY-AVECRPLTPQ----AVDLLKQMLTKDPERRPSAAQVLHH 279
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 127/282 (45%), Gaps = 43/282 (15%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVI 69
+G G F V A K++ ++VAIK + K+ +E E+ L K+ HPNIV L ++
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 70 RENDILYFVFEYMECNLYQLMKDR--EKCF-SEAEVRNWCFQVFQGLAYMHQRGYFHRDL 126
LY + + + + DR EK F +E + FQV + Y+H G HRDL
Sbjct: 86 ESGGHLYLIMQLVSGG---ELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDL 142
Query: 127 KPENLL---VSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDM 182
KPENLL + +D+ I I+DFGL++ + + T Y APEVL Q YS VD
Sbjct: 143 KPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQK-PYSKAVDC 201
Query: 183 WAMGAIMAELITLRPLFPGTSEA---DEIYKICSVIGTPTQDSWADGLLLARAINYKFPQ 239
W++G I L+ P F ++A ++I K +P D +D
Sbjct: 202 WSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS------------- 248
Query: 240 LVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
A I L DP KR T +ALQHP
Sbjct: 249 ----------------AKDFIRHLMEKDPEKRFTCEQALQHP 274
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 102/205 (49%), Gaps = 8/205 (3%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSHPNI 62
Y+L+K +G G F V A +G+ VA+K + K + L REV+ ++ ++HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 63 VKLKEVIRENDILYFVFEYM---ECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
VKL EVI LY V EY E Y + R K E E R Q+ + Y HQ+
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK---EKEARAKFRQIVSAVQYCHQK 132
Query: 120 GYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
HRDLK ENLL+ D IKIADFG + E + Y APE+
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 179 KVDMWAMGAIMAELITLRPLFPGTS 203
+VD+W++G I+ L++ F G +
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 127/282 (45%), Gaps = 43/282 (15%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVI 69
+G G F V A K++ ++VAIK + K+ +E E+ L K+ HPNIV L ++
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 70 RENDILYFVFEYMECNLYQLMKDR--EKCF-SEAEVRNWCFQVFQGLAYMHQRGYFHRDL 126
LY + + + + DR EK F +E + FQV + Y+H G HRDL
Sbjct: 86 ESGGHLYLIMQLVSGG---ELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDL 142
Query: 127 KPENLL---VSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDM 182
KPENLL + +D+ I I+DFGL++ + + T Y APEVL Q YS VD
Sbjct: 143 KPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQK-PYSKAVDC 201
Query: 183 WAMGAIMAELITLRPLFPGTSEA---DEIYKICSVIGTPTQDSWADGLLLARAINYKFPQ 239
W++G I L+ P F ++A ++I K +P D +D
Sbjct: 202 WSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS------------- 248
Query: 240 LVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
A I L DP KR T +ALQHP
Sbjct: 249 ----------------AKDFIRHLMEKDPEKRFTCEQALQHP 274
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 127/282 (45%), Gaps = 43/282 (15%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVI 69
+G G F V A K++ ++VAIK + K+ +E E+ L K+ HPNIV L ++
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 70 RENDILYFVFEYMECNLYQLMKDR--EKCF-SEAEVRNWCFQVFQGLAYMHQRGYFHRDL 126
LY + + + + DR EK F +E + FQV + Y+H G HRDL
Sbjct: 86 ESGGHLYLIMQLVSGG---ELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDL 142
Query: 127 KPENLL---VSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDM 182
KPENLL + +D+ I I+DFGL++ + + T Y APEVL Q YS VD
Sbjct: 143 KPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQK-PYSKAVDC 201
Query: 183 WAMGAIMAELITLRPLFPGTSEA---DEIYKICSVIGTPTQDSWADGLLLARAINYKFPQ 239
W++G I L+ P F ++A ++I K +P D +D
Sbjct: 202 WSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS------------- 248
Query: 240 LVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
A I L DP KR T +ALQHP
Sbjct: 249 ----------------AKDFIRHLMEKDPEKRFTCEQALQHP 274
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 134/292 (45%), Gaps = 42/292 (14%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV--NLREVKSLRKMS 58
M + +K +G GTFG V K +G A+K ++K+ ++ V + E + L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
HP + LK + +D L FV EY RE+ F+E R + ++ L Y+H
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 119 RGYFHRDLKPENLLVSKDT-IKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYLY 176
R +RD+K ENL++ KD IKI DFGL +E I+ + T Y APEV L+ Y
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV-LEDNDY 182
Query: 177 SSKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
VD W +G +M E++ R P + + + +++ L+L I
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFY--NQDHERLFE----------------LILMEEI-- 222
Query: 236 KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKR-----PTAAEALQHPF 282
+FP+ L P A SL+A L DP +R A E ++H F
Sbjct: 223 RFPR-------TLSPEAK----SLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 157/299 (52%), Gaps = 30/299 (10%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ Y+L++++G G + V+ AI+ + E V +K +K + ++ +++LR + N
Sbjct: 43 DDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKK-KIKREVKILENLRGGT--N 99
Query: 62 IVKLKEVIRE--NDILYFVFEYMECN----LYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
I+KL + +++ + VFEY+ LYQ++ D ++R + +++ + L Y
Sbjct: 100 IIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTD-------FDIRFYMYELLKALDY 152
Query: 116 MHQRGYFHRDLKPENLLVS--KDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
H +G HRD+KP N+++ + +++ D+GLA + + V++R+++ PE+L+
Sbjct: 153 CHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDY 212
Query: 174 YLYSSKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
+Y +DMW++G ++A +I R P F G D++ +I V+GT + +
Sbjct: 213 QMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHI--D 270
Query: 233 INYKFPQLVGVPL----SVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
++ F ++G + S N+ +A+ L+ L +D +R TA EA++HP+
Sbjct: 271 LDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPY 329
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 157/299 (52%), Gaps = 30/299 (10%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ Y+L++++G G + V+ AI+ + E V +K +K + ++ +++LR + N
Sbjct: 38 DDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKK-KIKREVKILENLRGGT--N 94
Query: 62 IVKLKEVIRE--NDILYFVFEYMECN----LYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
I+KL + +++ + VFEY+ LYQ++ D ++R + +++ + L Y
Sbjct: 95 IIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTD-------FDIRFYMYELLKALDY 147
Query: 116 MHQRGYFHRDLKPENLLVS--KDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQS 173
H +G HRD+KP N+++ + +++ D+GLA + + V++R+++ PE+L+
Sbjct: 148 CHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDY 207
Query: 174 YLYSSKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
+Y +DMW++G ++A +I R P F G D++ +I V+GT + +
Sbjct: 208 QMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHI--D 265
Query: 233 INYKFPQLVGVPL----SVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
++ F ++G + S N+ +A+ L+ L +D +R TA EA++HP+
Sbjct: 266 LDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPY 324
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 134/292 (45%), Gaps = 42/292 (14%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV--NLREVKSLRKMS 58
M + +K +G GTFG V K +G A+K ++K+ ++ V + E + L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
HP + LK + +D L FV EY RE+ F+E R + ++ L Y+H
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 119 RGYFHRDLKPENLLVSKDT-IKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYLY 176
R +RD+K ENL++ KD IKI DFGL +E I+ + T Y APEV L+ Y
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV-LEDNDY 182
Query: 177 SSKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
VD W +G +M E++ R P + + + +++ L+L I
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFY--NQDHERLFE----------------LILMEEI-- 222
Query: 236 KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKR-----PTAAEALQHPF 282
+FP+ L P A SL+A L DP +R A E ++H F
Sbjct: 223 RFPR-------TLSPEAK----SLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 103/205 (50%), Gaps = 8/205 (3%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSHPNI 62
Y+L+K +G G F V A +G+ VA++ + K + L REV+ ++ ++HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 63 VKLKEVIRENDILYFVFEYM---ECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
VKL EVI LY V EY E Y + R K E E R Q+ + Y HQ+
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK---EKEARAKFRQIVSAVQYCHQK 132
Query: 120 GYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
HRDLK ENLL+ D IKIADFG + E + + Y APE+
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 179 KVDMWAMGAIMAELITLRPLFPGTS 203
+VD+W++G I+ L++ F G +
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 134/292 (45%), Gaps = 42/292 (14%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV--NLREVKSLRKMS 58
M + +K +G GTFG V K +G A+K ++K+ ++ V + E + L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
HP + LK + +D L FV EY RE+ F+E R + ++ L Y+H
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 119 RGYFHRDLKPENLLVSKDT-IKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYLY 176
R +RD+K ENL++ KD IKI DFGL +E I+ + T Y APEV L+ Y
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV-LEDNDY 182
Query: 177 SSKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
VD W +G +M E++ R P + + + +++ L+L I
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFY--NQDHERLFE----------------LILMEEI-- 222
Query: 236 KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKR-----PTAAEALQHPF 282
+FP+ L P A SL+A L DP +R A E ++H F
Sbjct: 223 RFPR-------TLSPEAK----SLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 135/285 (47%), Gaps = 39/285 (13%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
+++ E+G G V+R K + + A+K +KK + ++ + E+ L ++SHPNI+
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKK---TVDKKIVRTEIGVLLRLSHPNII 111
Query: 64 KLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYF 122
KLKE+ + V E + L+ + ++ +SE + + Q+ + +AY+H+ G
Sbjct: 112 KLKEIFETPTEISLVLELVTGGELFDRIVEK-GYYSERDAADAVKQILEAVAYLHENGIV 170
Query: 123 HRDLKPENLLVSKDT----IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
HRDLKPENLL + +KIADFGL++ + + T Y APE+ L+ Y
Sbjct: 171 HRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEI-LRGCAYGP 229
Query: 179 KVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN--YK 236
+VDMW++G I L +C P D D + R +N Y
Sbjct: 230 EVDMWSVGIITYIL------------------LCGF--EPFYDERGDQFMFRRILNCEYY 269
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
F +S + +A L+ L DP KR T +ALQHP
Sbjct: 270 F-------ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHP 307
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 134/292 (45%), Gaps = 42/292 (14%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV--NLREVKSLRKMS 58
M + +K +G GTFG V K +G A+K ++K+ ++ V + E + L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
HP + LK + +D L FV EY RE+ F+E R + ++ L Y+H
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 119 RGYFHRDLKPENLLVSKDT-IKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYLY 176
R +RD+K ENL++ KD IKI DFGL +E I+ + T Y APEV L+ Y
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV-LEDNDY 182
Query: 177 SSKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
VD W +G +M E++ R P + + + +++ L+L I
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFY--NQDHERLFE----------------LILMEEI-- 222
Query: 236 KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKR-----PTAAEALQHPF 282
+FP+ L P A SL+A L DP +R A E ++H F
Sbjct: 223 RFPR-------TLSPEAK----SLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 134/292 (45%), Gaps = 42/292 (14%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV--NLREVKSLRKMS 58
M + +K +G GTFG V K +G A+K ++K+ ++ V + E + L+
Sbjct: 7 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 66
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
HP + LK + +D L FV EY RE+ F+E R + ++ L Y+H
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 126
Query: 119 RGYFHRDLKPENLLVSKDT-IKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYLY 176
R +RD+K ENL++ KD IKI DFGL +E I+ + T Y APEV L+ Y
Sbjct: 127 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV-LEDNDY 185
Query: 177 SSKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
VD W +G +M E++ R P + + + +++ L+L I
Sbjct: 186 GRAVDWWGLGVVMYEMMCGRLPFY--NQDHERLFE----------------LILMEEI-- 225
Query: 236 KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKR-----PTAAEALQHPF 282
+FP+ L P A SL+A L DP +R A E ++H F
Sbjct: 226 RFPR-------TLSPEAK----SLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 266
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 134/292 (45%), Gaps = 42/292 (14%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV--NLREVKSLRKMS 58
M + +K +G GTFG V K +G A+K ++K+ ++ V + E + L+
Sbjct: 9 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 68
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
HP + LK + +D L FV EY RE+ F+E R + ++ L Y+H
Sbjct: 69 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 128
Query: 119 RGYFHRDLKPENLLVSKDT-IKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYLY 176
R +RD+K ENL++ KD IKI DFGL +E I+ + T Y APEV L+ Y
Sbjct: 129 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV-LEDNDY 187
Query: 177 SSKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
VD W +G +M E++ R P + + + +++ L+L I
Sbjct: 188 GRAVDWWGLGVVMYEMMCGRLPFY--NQDHERLFE----------------LILMEEI-- 227
Query: 236 KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKR-----PTAAEALQHPF 282
+FP+ L P A SL+A L DP +R A E ++H F
Sbjct: 228 RFPR-------TLSPEAK----SLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 268
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 134/292 (45%), Gaps = 42/292 (14%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV--NLREVKSLRKMS 58
M + +K +G GTFG V K +G A+K ++K+ ++ V + E + L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
HP + LK + +D L FV EY RE+ F+E R + ++ L Y+H
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 119 RGYFHRDLKPENLLVSKDT-IKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYLY 176
R +RD+K ENL++ KD IKI DFGL +E I+ + T Y APEV L+ Y
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV-LEDNDY 182
Query: 177 SSKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
VD W +G +M E++ R P + + + +++ L+L I
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFY--NQDHERLFE----------------LILMEEI-- 222
Query: 236 KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKR-----PTAAEALQHPF 282
+FP+ L P A SL+A L DP +R A E ++H F
Sbjct: 223 RFPR-------TLSPEAK----SLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 137/293 (46%), Gaps = 43/293 (14%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV--NLREVKSLRKMS 58
M ++ +K +G GTFG V K +G A+K +KK+ ++ V L E + L+
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 66
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH- 117
HP + LK + +D L FV EY RE+ FSE R + ++ L Y+H
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 126
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYL 175
++ +RDLK ENL++ KD IKI DFGL +E I + T Y APEV L+
Sbjct: 127 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV-LEDND 185
Query: 176 YSSKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
Y VD W +G +M E++ R P + + +++++ L+L I
Sbjct: 186 YGRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKLFE----------------LILMEEI- 226
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKR-----PTAAEALQHPF 282
+FP+ +G +A SL++ L DP +R A E +QH F
Sbjct: 227 -RFPRTLG-----------PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 267
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 108/212 (50%), Gaps = 15/212 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
+++ + +G G FG V R I + +GE VAIK+ +++ E++ ++K++HPN+V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 64 KLKEV------IRENDILYFVFEYMEC-NLYQLMKDREKC--FSEAEVRNWCFQVFQGLA 114
+EV + ND+ EY E +L + + E C E +R + L
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 115 YMHQRGYFHRDLKPENLLVSKDTI----KIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
Y+H+ HRDLKPEN+++ KI D G A+E++ TE+V T Y APE+L
Sbjct: 136 YLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELL 195
Query: 171 LQSYLYSSKVDMWAMGAIMAELIT-LRPLFPG 201
Q Y+ VD W+ G + E IT RP P
Sbjct: 196 EQKK-YTVTVDYWSFGTLAFECITGFRPFLPN 226
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 156/295 (52%), Gaps = 22/295 (7%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ Y+L++++G G + V+ AI+ + E V +K +K + ++ +++LR PN
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPN 92
Query: 62 IVKLKEVIRE--NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
I+ L +++++ + VFE++ ++ + + ++ ++R + +++ + L Y H
Sbjct: 93 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSM 149
Query: 120 GYFHRDLKPENLLVSKD--TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
G HRD+KP N+++ + +++ D+GLA + + V++R+++ PE+L+ +Y
Sbjct: 150 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 209
Query: 178 SKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
+DMW++G ++A +I + P F G D++ +I V+GT + D + ++ +
Sbjct: 210 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI--ELDPR 267
Query: 237 FPQLVGVP----LSVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
F ++G + S N+ +A+ + L +D R TA EA++HP+
Sbjct: 268 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 322
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 108/212 (50%), Gaps = 15/212 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
+++ + +G G FG V R I + +GE VAIK+ +++ E++ ++K++HPN+V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 64 KLKEV------IRENDILYFVFEYMEC-NLYQLMKDREKC--FSEAEVRNWCFQVFQGLA 114
+EV + ND+ EY E +L + + E C E +R + L
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 136
Query: 115 YMHQRGYFHRDLKPENLLVSKDTI----KIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
Y+H+ HRDLKPEN+++ KI D G A+E++ TE+V T Y APE+L
Sbjct: 137 YLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELL 196
Query: 171 LQSYLYSSKVDMWAMGAIMAELIT-LRPLFPG 201
Q Y+ VD W+ G + E IT RP P
Sbjct: 197 EQKK-YTVTVDYWSFGTLAFECITGFRPFLPN 227
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 137/293 (46%), Gaps = 43/293 (14%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV--NLREVKSLRKMS 58
M ++ +K +G GTFG V K +G A+K +KK+ ++ V L E + L+
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 67
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH- 117
HP + LK + +D L FV EY RE+ FSE R + ++ L Y+H
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 127
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYL 175
++ +RDLK ENL++ KD IKI DFGL +E I + T Y APEV L+
Sbjct: 128 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV-LEDND 186
Query: 176 YSSKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
Y VD W +G +M E++ R P + + +++++ L+L I
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKLFE----------------LILMEEI- 227
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKR-----PTAAEALQHPF 282
+FP+ +G +A SL++ L DP +R A E +QH F
Sbjct: 228 -RFPRTLG-----------PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 268
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 156/295 (52%), Gaps = 22/295 (7%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ Y+L++++G G + V+ AI+ + E V +K +K + ++ +++LR PN
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPN 93
Query: 62 IVKLKEVIRE--NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
I+ L +++++ + VFE++ ++ + + ++ ++R + +++ + L Y H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSM 150
Query: 120 GYFHRDLKPENLLVSKD--TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
G HRD+KP N+++ + +++ D+GLA + + V++R+++ PE+L+ +Y
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 210
Query: 178 SKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
+DMW++G ++A +I + P F G D++ +I V+GT + D + ++ +
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI--ELDPR 268
Query: 237 FPQLVGVPL----SVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
F ++G + S N+ +A+ + L +D R TA EA++HP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 156/295 (52%), Gaps = 22/295 (7%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ Y+L++++G G + V+ AI+ + E V +K +K + ++ +++LR PN
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPN 93
Query: 62 IVKLKEVIRE--NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
I+ L +++++ + VFE++ ++ + + ++ ++R + +++ + L Y H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSM 150
Query: 120 GYFHRDLKPENLLVSKD--TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
G HRD+KP N+++ + +++ D+GLA + + V++R+++ PE+L+ +Y
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 210
Query: 178 SKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
+DMW++G ++A +I + P F G D++ +I V+GT + D + ++ +
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI--ELDPR 268
Query: 237 FPQLVGVP----LSVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
F ++G + S N+ +A+ + L +D R TA EA++HP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 137/293 (46%), Gaps = 43/293 (14%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV--NLREVKSLRKMS 58
M ++ +K +G GTFG V K +G A+K +KK+ ++ V L E + L+
Sbjct: 9 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 68
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH- 117
HP + LK + +D L FV EY RE+ FSE R + ++ L Y+H
Sbjct: 69 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 128
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYL 175
++ +RDLK ENL++ KD IKI DFGL +E I + T Y APEV L+
Sbjct: 129 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV-LEDND 187
Query: 176 YSSKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
Y VD W +G +M E++ R P + + +++++ L+L I
Sbjct: 188 YGRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKLFE----------------LILMEEI- 228
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKR-----PTAAEALQHPF 282
+FP+ +G +A SL++ L DP +R A E +QH F
Sbjct: 229 -RFPRTLG-----------PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 269
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 156/295 (52%), Gaps = 22/295 (7%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ Y+L++++G G + V+ AI+ + E V +K +K + ++ +++LR PN
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPN 93
Query: 62 IVKLKEVIRE--NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
I+ L +++++ + VFE++ ++ + + ++ ++R + +++ + L Y H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSM 150
Query: 120 GYFHRDLKPENLLVSKD--TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
G HRD+KP N+++ + +++ D+GLA + + V++R+++ PE+L+ +Y
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 210
Query: 178 SKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
+DMW++G ++A +I + P F G D++ +I V+GT + D + ++ +
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI--ELDPR 268
Query: 237 FPQLVGVPL----SVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
F ++G + S N+ +A+ + L +D R TA EA++HP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 156/295 (52%), Gaps = 22/295 (7%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ Y+L++++G G + V+ AI+ + E V +K +K + ++ +++LR PN
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPN 93
Query: 62 IVKLKEVIRE--NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
I+ L +++++ + VFE++ ++ + + ++ ++R + +++ + L Y H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSM 150
Query: 120 GYFHRDLKPENLLVSKD--TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
G HRD+KP N+++ + +++ D+GLA + + V++R+++ PE+L+ +Y
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 210
Query: 178 SKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
+DMW++G ++A +I + P F G D++ +I V+GT + D + ++ +
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI--ELDPR 268
Query: 237 FPQLVGVPL----SVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
F ++G + S N+ +A+ + L +D R TA EA++HP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 156/295 (52%), Gaps = 22/295 (7%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ Y+L++++G G + V+ AI+ + E V +K +K + ++ +++LR PN
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPN 93
Query: 62 IVKLKEVIRE--NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
I+ L +++++ + VFE++ ++ + + ++ ++R + +++ + L Y H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSM 150
Query: 120 GYFHRDLKPENLLVSKD--TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
G HRD+KP N+++ + +++ D+GLA + + V++R+++ PE+L+ +Y
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 210
Query: 178 SKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
+DMW++G ++A +I + P F G D++ +I V+GT + D + ++ +
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI--ELDPR 268
Query: 237 FPQLVGVPL----SVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
F ++G + S N+ +A+ + L +D R TA EA++HP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 156/295 (52%), Gaps = 22/295 (7%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ Y+L++++G G + V+ AI+ + E V +K +K + ++ +++LR PN
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPN 92
Query: 62 IVKLKEVIRE--NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
I+ L +++++ + VFE++ ++ + + ++ ++R + +++ + L Y H
Sbjct: 93 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSM 149
Query: 120 GYFHRDLKPENLLVSKD--TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
G HRD+KP N+++ + +++ D+GLA + + V++R+++ PE+L+ +Y
Sbjct: 150 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 209
Query: 178 SKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
+DMW++G ++A +I + P F G D++ +I V+GT + D + ++ +
Sbjct: 210 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI--ELDPR 267
Query: 237 FPQLVGVPL----SVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
F ++G + S N+ +A+ + L +D R TA EA++HP+
Sbjct: 268 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 322
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 156/295 (52%), Gaps = 22/295 (7%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ Y+L++++G G + V+ AI+ + E V +K +K + ++ +++LR PN
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPN 93
Query: 62 IVKLKEVIRE--NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
I+ L +++++ + VFE++ ++ + + ++ ++R + +++ + L Y H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSM 150
Query: 120 GYFHRDLKPENLLVSKD--TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
G HRD+KP N+++ + +++ D+GLA + + V++R+++ PE+L+ +Y
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 210
Query: 178 SKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
+DMW++G ++A +I + P F G D++ +I V+GT + D + ++ +
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI--ELDPR 268
Query: 237 FPQLVGVPL----SVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
F ++G + S N+ +A+ + L +D R TA EA++HP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 156/295 (52%), Gaps = 22/295 (7%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ Y+L++++G G + V+ AI+ + E V +K +K + ++ +++LR PN
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPN 93
Query: 62 IVKLKEVIRE--NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
I+ L +++++ + VFE++ ++ + + ++ ++R + +++ + L Y H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSM 150
Query: 120 GYFHRDLKPENLLVSKD--TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
G HRD+KP N+++ + +++ D+GLA + + V++R+++ PE+L+ +Y
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 210
Query: 178 SKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
+DMW++G ++A +I + P F G D++ +I V+GT + D + ++ +
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI--ELDPR 268
Query: 237 FPQLVGVP----LSVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
F ++G + S N+ +A+ + L +D R TA EA++HP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 156/295 (52%), Gaps = 22/295 (7%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ Y+L++++G G + V+ AI+ + E V +K +K + ++ +++LR PN
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPN 91
Query: 62 IVKLKEVIRE--NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
I+ L +++++ + VFE++ ++ + + ++ ++R + +++ + L Y H
Sbjct: 92 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSM 148
Query: 120 GYFHRDLKPENLLVSKD--TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
G HRD+KP N+++ + +++ D+GLA + + V++R+++ PE+L+ +Y
Sbjct: 149 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 208
Query: 178 SKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
+DMW++G ++A +I + P F G D++ +I V+GT + D + ++ +
Sbjct: 209 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI--ELDPR 266
Query: 237 FPQLVGVP----LSVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
F ++G + S N+ +A+ + L +D R TA EA++HP+
Sbjct: 267 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 321
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 156/295 (52%), Gaps = 22/295 (7%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ Y+L++++G G + V+ AI+ + E V +K +K + ++ +++LR PN
Sbjct: 42 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPN 98
Query: 62 IVKLKEVIRE--NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
I+ L +++++ + VFE++ ++ + + ++ ++R + +++ + L Y H
Sbjct: 99 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSM 155
Query: 120 GYFHRDLKPENLLVSKD--TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
G HRD+KP N+++ + +++ D+GLA + + V++R+++ PE+L+ +Y
Sbjct: 156 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 215
Query: 178 SKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
+DMW++G ++A +I + P F G D++ +I V+GT + D + ++ +
Sbjct: 216 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI--ELDPR 273
Query: 237 FPQLVGVPL----SVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
F ++G + S N+ +A+ + L +D R TA EA++HP+
Sbjct: 274 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 328
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 101/205 (49%), Gaps = 8/205 (3%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSHPNI 62
Y+L+K +G G F V A +G+ VA+K + K + L REV+ + ++HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNI 75
Query: 63 VKLKEVIRENDILYFVFEYM---ECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
VKL EVI LY V EY E Y + R K E E R Q+ + Y HQ+
Sbjct: 76 VKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXK---EKEARAKFRQIVSAVQYCHQK 132
Query: 120 GYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
HRDLK ENLL+ D IKIADFG + E + Y APE+
Sbjct: 133 FIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 179 KVDMWAMGAIMAELITLRPLFPGTS 203
+VD+W++G I+ L++ F G +
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 156/295 (52%), Gaps = 22/295 (7%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ Y+L++++G G + V+ AI+ + E V +K +K + ++ +++LR PN
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPN 93
Query: 62 IVKLKEVIRE--NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
I+ L +++++ + VFE++ ++ + + ++ ++R + +++ + L Y H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSM 150
Query: 120 GYFHRDLKPENLLVSKD--TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
G HRD+KP N+++ + +++ D+GLA + + V++R+++ PE+L+ +Y
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 210
Query: 178 SKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
+DMW++G ++A +I + P F G D++ +I V+GT + D + ++ +
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI--ELDPR 268
Query: 237 FPQLVGVPL----SVLMPSANK-----DAVSLIASLCSWDPSKRPTAAEALQHPF 282
F ++G + S N+ +A+ + L +D R TA EA++HP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 140/299 (46%), Gaps = 36/299 (12%)
Query: 4 YKLIKEV-GDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRK-MSHPN 61
YKL E+ G+G + V A+S Q+G+ A+K ++K+ V REV++L + + N
Sbjct: 14 YKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRV-FREVETLYQCQGNKN 72
Query: 62 IVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGY 121
I++L E ++ Y VFE ++ ++K F+E E V L ++H +G
Sbjct: 73 ILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGI 132
Query: 122 FHRDLKPENLLVSK----DTIKIADFGLAREIN--------SRPPFTEYVSTRWYRAPEV 169
HRDLKPEN+L +KI DF L + + P T + Y APEV
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEV 192
Query: 170 LL----QSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEAD---EIYKICSVIGTPTQDS 222
+ Q+ Y + D+W++G ++ +++ P F G AD + ++C V +S
Sbjct: 193 VEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFES 252
Query: 223 WADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
+G Y+FP +S +A LI+ L D +R +AA+ LQHP
Sbjct: 253 IQEG-------KYEFPDKDWAHIS-------SEAKDLISKLLVRDAKQRLSAAQVLQHP 297
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 137/293 (46%), Gaps = 43/293 (14%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV--NLREVKSLRKMS 58
M ++ +K +G GTFG V K +G A+K +KK+ ++ V L E + L+
Sbjct: 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 206
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH- 117
HP + LK + +D L FV EY RE+ FSE R + ++ L Y+H
Sbjct: 207 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 266
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYL 175
++ +RDLK ENL++ KD IKI DFGL +E I + T Y APEV L+
Sbjct: 267 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV-LEDND 325
Query: 176 YSSKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
Y VD W +G +M E++ R P + + +++++ L+L I
Sbjct: 326 YGRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKLFE----------------LILMEEI- 366
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKR-----PTAAEALQHPF 282
+FP+ +G +A SL++ L DP +R A E +QH F
Sbjct: 367 -RFPRTLG-----------PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 407
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 137/293 (46%), Gaps = 43/293 (14%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV--NLREVKSLRKMS 58
M ++ +K +G GTFG V K +G A+K +KK+ ++ V L E + L+
Sbjct: 150 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 209
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH- 117
HP + LK + +D L FV EY RE+ FSE R + ++ L Y+H
Sbjct: 210 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 269
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYL 175
++ +RDLK ENL++ KD IKI DFGL +E I + T Y APEV L+
Sbjct: 270 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV-LEDND 328
Query: 176 YSSKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
Y VD W +G +M E++ R P + + +++++ L+L I
Sbjct: 329 YGRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKLFE----------------LILMEEI- 369
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKR-----PTAAEALQHPF 282
+FP+ +G +A SL++ L DP +R A E +QH F
Sbjct: 370 -RFPRTLG-----------PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 410
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 101/205 (49%), Gaps = 8/205 (3%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSHPNI 62
Y+L K +G G F V A +G VA+K + K + L REV+ ++ ++HPNI
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 63 VKLKEVIRENDILYFVFEYM---ECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
VKL EVI LY V EY E Y + R K E E R Q+ + Y HQ+
Sbjct: 77 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK---EKEARAKFRQIVSAVQYCHQK 133
Query: 120 GYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
HRDLK ENLL+ D IKIADFG + E + + Y APE+
Sbjct: 134 YIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGP 193
Query: 179 KVDMWAMGAIMAELITLRPLFPGTS 203
+VD+W++G I+ L++ F G +
Sbjct: 194 EVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 134/285 (47%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 125
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S TE T Y PE +++ ++
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTELCGTLDYLPPE-MIEGRMH 183
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 224
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 225 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 258
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 98/202 (48%), Gaps = 2/202 (0%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSHPNI 62
Y+L+K +G G F V A +G+ VA+K + K + L REV+ ++ ++HPNI
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 68
Query: 63 VKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYF 122
VKL EVI LY V EY E E R Q+ + Y HQ+
Sbjct: 69 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIV 128
Query: 123 HRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVD 181
HRDLK ENLL+ D IKIADFG + E + + Y APE+ +VD
Sbjct: 129 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVD 188
Query: 182 MWAMGAIMAELITLRPLFPGTS 203
+W++G I+ L++ F G +
Sbjct: 189 VWSLGVILYTLVSGSLPFDGQN 210
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 118/220 (53%), Gaps = 8/220 (3%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
++Y +++G G G+V+ A+ +G+ VAI++M + +E + + E+ +R+ +PN
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENKNPN 78
Query: 62 IVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
IV + D L+ V EY+ +L ++ E C E ++ C + Q L ++H
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 121 YFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
HRD+K +N+L+ D ++K+ DFG +I + +E V T ++ APEV+ + Y
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKA-YGP 195
Query: 179 KVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTP 218
KVD+W++G + E+I P + + +Y I + GTP
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GTP 234
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 134/285 (47%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 125
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S T+ T Y PE +++ ++
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTDLCGTLDYLPPE-MIEGRMH 183
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 224
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 225 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 258
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 134/285 (47%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 125
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S T+ T Y PE +++ ++
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTDLCGTLDYLPPE-MIEGRMH 183
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 224
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 225 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 258
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 134/285 (47%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 130
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S T+ T Y PE +++ ++
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTDLCGTLDYLPPE-MIEGRMH 188
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 229
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 230 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 263
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 32/286 (11%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHP 60
++ Y + +E+G G FG V R + +G A K + + S +E V +E++++ + HP
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR-KEIQTMSVLRHP 108
Query: 61 NIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+V L + +++ + ++E+M L++ + D SE E + QV +GL +MH+
Sbjct: 109 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 168
Query: 120 GYFHRDLKPENLLVS---KDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
Y H DLKPEN++ + + +K+ DFGL ++ + T + APEV +
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVA-EGKPV 227
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
DMW++G + L++ F G ++ DE + DS G+
Sbjct: 228 GYYTDMWSVGVLSYILLSGLSPFGGEND-DETLRNVKSCDWNMDDSAFSGI--------- 277
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
++D I L DP+ R T +AL+HP+
Sbjct: 278 ----------------SEDGKDFIRKLLLADPNTRMTIHQALEHPW 307
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 134/285 (47%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 126
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S T+ T Y PE +++ ++
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTDLCGTLDYLPPE-MIEGRMH 184
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 225
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 226 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 259
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 132/286 (46%), Gaps = 32/286 (11%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHP 60
++ Y + +E+G G FG V R + +G A K + + S +E V +E++++ + HP
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR-KEIQTMSVLRHP 214
Query: 61 NIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+V L + +++ + ++E+M L++ + D SE E + QV +GL +MH+
Sbjct: 215 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 274
Query: 120 GYFHRDLKPENLLVS---KDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
Y H DLKPEN++ + + +K+ DFGL ++ + T + APEV +
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVA-EGKPV 333
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
DMW++G + L++ F G ++ + + + S W N
Sbjct: 334 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC-------DW----------NMD 376
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
G+ ++D I L DP+ R T +AL+HP+
Sbjct: 377 DSAFSGI---------SEDGKDFIRKLLLADPNTRMTIHQALEHPW 413
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 133/285 (46%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 125
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S T T Y PE +++ ++
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-TXLCGTLDYLPPE-MIEGRMH 183
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 224
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 225 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 258
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 133/285 (46%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 11 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 70
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 129
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S T T Y PE +++ ++
Sbjct: 130 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-TTLCGTLDYLPPE-MIEGRMH 187
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 188 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 228
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 229 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 262
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 133/285 (46%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 6 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 65
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 66 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 124
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S T T Y PE +++ ++
Sbjct: 125 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-TTLCGTLDYLPPE-MIEGRMH 182
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 183 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 223
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 224 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 257
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 133/285 (46%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 128
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S T T Y PE +++ ++
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-TTLCGTLDYLPPE-MIEGRMH 186
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 227
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 228 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 261
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 134/300 (44%), Gaps = 49/300 (16%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK---KKYYSWEECVNLRE-----VKS 53
E Y+ + +G G V R I K + + A+K + +S EE LRE V
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 54 LRKMS-HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQ 111
LRK+S HPNI++LK+ N + VF+ M+ L+ + ++ SE E R + +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLE 135
Query: 112 GLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+ +H+ HRDLKPEN+L+ D IK+ DFG + +++ E T Y APE++
Sbjct: 136 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEII 195
Query: 171 LQSYL-----YSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICS---VIGTPTQDS 222
S Y +VDMW+ G IM L+ P F + + I S G+P D
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD 255
Query: 223 WADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
++D + KD L++ P KR TA EAL HPF
Sbjct: 256 YSDTV--------------------------KD---LVSRFLVVQPQKRYTAEEALAHPF 286
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 134/300 (44%), Gaps = 49/300 (16%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK---KKYYSWEECVNLRE-----VKS 53
E Y+ + +G G V R I K + + A+K + +S EE LRE V
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 54 LRKMS-HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQ 111
LRK+S HPNI++LK+ N + VF+ M+ L+ + ++ SE E R + +
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLE 122
Query: 112 GLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+ +H+ HRDLKPEN+L+ D IK+ DFG + +++ E T Y APE++
Sbjct: 123 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEII 182
Query: 171 LQSYL-----YSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICS---VIGTPTQDS 222
S Y +VDMW+ G IM L+ P F + + I S G+P D
Sbjct: 183 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD 242
Query: 223 WADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
++D + KD L++ P KR TA EAL HPF
Sbjct: 243 YSDTV--------------------------KD---LVSRFLVVQPQKRYTAEEALAHPF 273
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 133/285 (46%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 125
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S T T Y PE +++ ++
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTTLCGTLDYLPPE-MIEGRMH 183
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 224
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 225 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 258
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 133/285 (46%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 130
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S T T Y PE +++ ++
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTTLCGTLDYLPPE-MIEGRMH 188
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 229
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 230 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 263
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 133/285 (46%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 59 HPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK-FDEQRTATYITELANALSYCH 130
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S T T Y PE +++ ++
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTTLCGTLDYLPPE-MIEGRMH 188
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 229
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 230 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 263
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 133/285 (46%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 128
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S T T Y PE +++ ++
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTTLCGTLDYLPPE-MIEGRMH 186
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 227
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 228 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 261
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 115/218 (52%), Gaps = 9/218 (4%)
Query: 2 ERYKLIKEVGDGTFGSVW---RAISKQSGEVVAIKKMKKKYY---SWEECVNLREVKSLR 55
E ++L++ +G G +G V+ + +G++ A+K +KK + + E L
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 56 KMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
++ HP IV L + LY + EY+ + +RE F E + ++ L +
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 116 MHQRGYFHRDLKPENLLVS-KDTIKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQS 173
+HQ+G +RDLKPEN++++ + +K+ DFGL +E I+ + T Y APE+L++S
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRS 196
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKI 211
++ VD W++GA+M +++T P F G + I KI
Sbjct: 197 G-HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKI 233
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 106/194 (54%), Gaps = 11/194 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+RY+L+K++G G FG KQS E+VA+K +++ +E V RE+ + R + HPN
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG-EKIDENVK-REIINHRSLRHPN 75
Query: 62 IVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
IV+ KEVI L V EY L++ + + + FSE E R + Q+ G++Y H
Sbjct: 76 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARFFFQQLISGVSYCHAMQ 134
Query: 121 YFHRDLKPENLLVSKDT---IKIADFGLARE--INSRPPFTEYVSTRWYRAPEVLLQSYL 175
HRDLK EN L+ +KI DFG ++ ++S+P T V T Y APEVLL+
Sbjct: 135 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKEY 192
Query: 176 YSSKVDMWAMGAIM 189
D+W+ G +
Sbjct: 193 DGKVADVWSCGVTL 206
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 128
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S + T Y PE +++ ++
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRDDLCGTLDYLPPE-MIEGRMH 186
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 227
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 228 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 261
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 117/220 (53%), Gaps = 8/220 (3%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
++Y +++G G G+V+ A+ +G+ VAI++M + +E + + E+ +R+ +PN
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENKNPN 78
Query: 62 IVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
IV + D L+ V EY+ +L ++ E C E ++ C + Q L ++H
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 121 YFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
HRD+K +N+L+ D ++K+ DFG +I + + V T ++ APEV+ + Y
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA-YGP 195
Query: 179 KVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTP 218
KVD+W++G + E+I P + + +Y I + GTP
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GTP 234
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 117/220 (53%), Gaps = 8/220 (3%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
++Y +++G G G+V+ A+ +G+ VAI++M + +E + + E+ +R+ +PN
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENKNPN 78
Query: 62 IVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
IV + D L+ V EY+ +L ++ E C E ++ C + Q L ++H
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 121 YFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
HRD+K +N+L+ D ++K+ DFG +I + + V T ++ APEV+ + Y
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKA-YGP 195
Query: 179 KVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTP 218
KVD+W++G + E+I P + + +Y I + GTP
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GTP 234
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 117/220 (53%), Gaps = 8/220 (3%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
++Y +++G G G+V+ A+ +G+ VAI++M + +E + + E+ +R+ +PN
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENKNPN 79
Query: 62 IVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
IV + D L+ V EY+ +L ++ E C E ++ C + Q L ++H
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQ 137
Query: 121 YFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
HRD+K +N+L+ D ++K+ DFG +I + + V T ++ APEV+ + Y
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKA-YGP 196
Query: 179 KVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTP 218
KVD+W++G + E+I P + + +Y I + GTP
Sbjct: 197 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GTP 235
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 115/218 (52%), Gaps = 9/218 (4%)
Query: 2 ERYKLIKEVGDGTFGSVW---RAISKQSGEVVAIKKMKKKYY---SWEECVNLREVKSLR 55
E ++L++ +G G +G V+ + +G++ A+K +KK + + E L
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 56 KMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
++ HP IV L + LY + EY+ + +RE F E + ++ L +
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 116 MHQRGYFHRDLKPENLLVS-KDTIKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQS 173
+HQ+G +RDLKPEN++++ + +K+ DFGL +E I+ + T Y APE+L++S
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRS 196
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKI 211
++ VD W++GA+M +++T P F G + I KI
Sbjct: 197 G-HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKI 233
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 135/286 (47%), Gaps = 39/286 (13%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 126
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLA-REINSRPPFTEYVSTRWYRAPEVLLQSYL 175
+ HRD+KPENLL+ S +KIADFG + +SR T T Y PE +++ +
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR--TTLSGTLDYLPPE-MIEGRM 183
Query: 176 YSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
+ KVD+W++G + E + +P F + E YK S + +
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEF 224
Query: 236 KFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 225 TFPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 259
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 131/285 (45%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A K S ++A+K + K + E REV+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L ++ +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 67 HPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 125
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S T Y PE +++ ++
Sbjct: 126 SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-AALCGTLDYLPPE-MIEGRMH 183
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + D +I V +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRV-------------------EFT 224
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 225 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 258
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 133/285 (46%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 126
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S T T Y PE +++ ++
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT-LCGTLDYLPPE-MIEGRMH 184
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 225
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 226 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 259
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 133/285 (46%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 92
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 151
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S T T Y PE +++ ++
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTTLCGTLDYLPPE-MIEGRMH 209
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 250
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 251 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 284
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQ ++A+K + K + E REV+ +
Sbjct: 4 LEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 63
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 64 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 122
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S T T Y PE +++ ++
Sbjct: 123 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-TTLCGTLDYLPPE-MIEGRMH 180
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 181 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 221
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 222 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 255
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 133/285 (46%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 24 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 83
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 84 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 142
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S T T Y PE +++ ++
Sbjct: 143 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTTLCGTLDYLPPE-MIEGRMH 200
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 201 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 241
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 242 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 275
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 125
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S T Y PE +++ ++
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-AALCGTLDYLPPE-MIEGRMH 183
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 224
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 225 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 258
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 125
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S T Y PE +++ ++
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-XXLCGTLDYLPPE-MIEGRMH 183
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 224
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 225 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 258
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 128
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIA+FG + S T T Y PE +++ ++
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPS-SRRTTLCGTLDYLPPE-MIEGRMH 186
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 227
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 228 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 261
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 133/300 (44%), Gaps = 49/300 (16%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK---KKYYSWEECVNLRE-----VKS 53
E Y+ + +G G V R I K + + A+K + +S EE LRE V
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 54 LRKMS-HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQ 111
LRK+S HPNI++LK+ N + VF+ M+ L+ + ++ SE E R + +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLE 135
Query: 112 GLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+ +H+ HRDLKPEN+L+ D IK+ DFG + +++ T Y APE++
Sbjct: 136 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEII 195
Query: 171 LQSYL-----YSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICS---VIGTPTQDS 222
S Y +VDMW+ G IM L+ P F + + I S G+P D
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD 255
Query: 223 WADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
++D + KD L++ P KR TA EAL HPF
Sbjct: 256 YSDTV--------------------------KD---LVSRFLVVQPQKRYTAEEALAHPF 286
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 128
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S T Y PE +++ ++
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-XXLCGTLDYLPPE-MIEGRMH 186
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 227
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 228 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 261
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 128
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S T Y PE +++ ++
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRAALCGTLDYLPPE-MIEGRMH 186
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 227
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 228 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 261
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 106/195 (54%), Gaps = 13/195 (6%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL-REVKSLRKMSHP 60
+RY+L+K++G G FG KQS E+VA+K +++ + N+ RE+ + R + HP
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER---GEKIAANVKREIINHRSLRHP 75
Query: 61 NIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
NIV+ KEVI L V EY L++ + + + FSE E R + Q+ G++Y H
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARFFFQQLISGVSYCHAM 134
Query: 120 GYFHRDLKPENLLVSKDT---IKIADFGLARE--INSRPPFTEYVSTRWYRAPEVLLQSY 174
HRDLK EN L+ +KI DFG ++ ++S+P T V T Y APEVLL+
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKE 192
Query: 175 LYSSKVDMWAMGAIM 189
D+W+ G +
Sbjct: 193 YDGKVADVWSCGVTL 207
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 68
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 127
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIA+FG + S T T Y PE +++ ++
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPS-SRRTTLCGTLDYLPPE-MIEGRMH 185
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 226
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 227 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 260
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 139/294 (47%), Gaps = 41/294 (13%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS------WEECVNLR-EVKSL 54
+ Y + K +G G G V A +++ + VAIK + K+ ++ + +N+ E++ L
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 55 RKMSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGL 113
+K++HP I+K+K D Y V E ME L+ + ++ EA + + +Q+ +
Sbjct: 76 KKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKR-LKEATCKLYFYQMLLAV 133
Query: 114 AYMHQRGYFHRDLKPENLLVSKDT----IKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
Y+H+ G HRDLKPEN+L+S IKI DFG ++ + T Y APEV
Sbjct: 134 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 193
Query: 170 LLQ--SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGL 227
L+ + Y+ VD W++G I+ ++ P F SE TQ S D +
Sbjct: 194 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPF---SEHR------------TQVSLKDQI 238
Query: 228 LLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
+ Y F V +S + A+ L+ L DP R T EAL+HP
Sbjct: 239 TSGK---YNFIPEVWAEVS-------EKALDLVKKLLVVDPKARFTTEEALRHP 282
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 112/212 (52%), Gaps = 8/212 (3%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL----REVKSLRK 56
++ ++ I+ +G G+FG V A K++G++ A+K +KK ++ V + + SL +
Sbjct: 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR 81
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
+HP + +L + D L+FV E++ + + F EA R + ++ L ++
Sbjct: 82 -NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFL 140
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSY 174
H +G +RDLK +N+L+ + K+ADFG+ +E I + + T Y APE+ LQ
Sbjct: 141 HDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEI-LQEM 199
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEAD 206
LY VD WAMG ++ E++ F +E D
Sbjct: 200 LYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD 231
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 139/294 (47%), Gaps = 41/294 (13%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS------WEECVNLR-EVKSL 54
+ Y + K +G G G V A +++ + VAIK + K+ ++ + +N+ E++ L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 55 RKMSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGL 113
+K++HP I+K+K D Y V E ME L+ + ++ EA + + +Q+ +
Sbjct: 70 KKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKR-LKEATCKLYFYQMLLAV 127
Query: 114 AYMHQRGYFHRDLKPENLLVSKDT----IKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
Y+H+ G HRDLKPEN+L+S IKI DFG ++ + T Y APEV
Sbjct: 128 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 187
Query: 170 LLQ--SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGL 227
L+ + Y+ VD W++G I+ ++ P F SE TQ S D +
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPF---SEHR------------TQVSLKDQI 232
Query: 228 LLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
+ Y F V +S + A+ L+ L DP R T EAL+HP
Sbjct: 233 TSGK---YNFIPEVWAEVS-------EKALDLVKKLLVVDPKARFTTEEALRHP 276
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 142/289 (49%), Gaps = 37/289 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSHP 60
E ++++ E+GDG FG V++A +K++G + A K ++ K S EE + + E++ L HP
Sbjct: 11 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHP 68
Query: 61 NIVKLKEVIRENDILYFVFEYMECNLYQ-LMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
IVKL + L+ + E+ +M + ++ +E +++ C Q+ + L ++H +
Sbjct: 69 YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 120 GYFHRDLKPENLLVS-KDTIKIADFGL-AREINSRPPFTEYVSTRWYRAPEVLLQSYL-- 175
HRDLK N+L++ + I++ADFG+ A+ + + ++ T ++ APEV++ +
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 176 --YSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y K D+W++G + E+ + P + + KI PT LL
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS-DPPT-------LLTPSKW 240
Query: 234 NYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ +F + + L +P RP+AA+ L+HPF
Sbjct: 241 SVEFRDFLKIALDK-------------------NPETRPSAAQLLEHPF 270
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 92
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 151
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S + T Y PE +++ ++
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRDDLCGTLDYLPPE-MIEGRMH 209
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 250
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 251 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 284
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 137/294 (46%), Gaps = 41/294 (13%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS------WEECVNLR-EVKSL 54
+ Y + K +G G G V A +++ + VAIK + K+ ++ + +N+ E++ L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 55 RKMSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGL 113
+K++HP I+K+K D Y V E ME L+ + ++ EA + + +Q+ +
Sbjct: 70 KKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKR-LKEATCKLYFYQMLLAV 127
Query: 114 AYMHQRGYFHRDLKPENLLVSKDT----IKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
Y+H+ G HRDLKPEN+L+S IKI DFG ++ + T Y APEV
Sbjct: 128 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 187
Query: 170 LLQ--SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGL 227
L+ + Y+ VD W++G I+ ++ P F TQ S D +
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR---------------TQVSLKDQI 232
Query: 228 LLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
+ Y F V +S + A+ L+ L DP R T EAL+HP
Sbjct: 233 TSGK---YNFIPEVWAEVS-------EKALDLVKKLLVVDPKARFTTEEALRHP 276
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 131/285 (45%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 130
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S T T Y PE ++ +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTTLCGTLDYLPPEX-IEGRXH 188
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 229
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 230 FPDFV-----------TEGARDLISRLLKHNPSQRPXLREVLEHP 263
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 106/194 (54%), Gaps = 11/194 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+RY+L+K++G G FG KQ+ E+VA+K +++ +E V RE+ + R + HPN
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERG-EKIDENVK-REIINHRSLRHPN 76
Query: 62 IVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
IV+ KEVI L V EY L++ + + + FSE E R + Q+ G++Y H
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARFFFQQLISGVSYAHAMQ 135
Query: 121 YFHRDLKPENLLVSKDT---IKIADFGLARE--INSRPPFTEYVSTRWYRAPEVLLQSYL 175
HRDLK EN L+ +KIADFG ++ ++S+P V T Y APEVLL+
Sbjct: 136 VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQP--KSAVGTPAYIAPEVLLKKEY 193
Query: 176 YSSKVDMWAMGAIM 189
D+W+ G +
Sbjct: 194 DGKVADVWSCGVTL 207
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 68
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 127
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S T Y PE +++ ++
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRXXLCGTLDYLPPE-MIEGRMH 185
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 226
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 227 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 260
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 137/294 (46%), Gaps = 41/294 (13%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS------WEECVNLR-EVKSL 54
+ Y + K +G G G V A +++ + VAIK + K+ ++ + +N+ E++ L
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 55 RKMSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGL 113
+K++HP I+K+K D Y V E ME L+ + ++ EA + + +Q+ +
Sbjct: 69 KKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKR-LKEATCKLYFYQMLLAV 126
Query: 114 AYMHQRGYFHRDLKPENLLVSKDT----IKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
Y+H+ G HRDLKPEN+L+S IKI DFG ++ + T Y APEV
Sbjct: 127 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 186
Query: 170 LLQ--SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGL 227
L+ + Y+ VD W++G I+ ++ P F TQ S D +
Sbjct: 187 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR---------------TQVSLKDQI 231
Query: 228 LLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
+ Y F V +S + A+ L+ L DP R T EAL+HP
Sbjct: 232 TSGK---YNFIPEVWAEVS-------EKALDLVKKLLVVDPKARFTTEEALRHP 275
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 110/205 (53%), Gaps = 16/205 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSHPNI 62
+++I E+GDG FG V++A +K++ + A K + K S EE + + E+ L HPNI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNI 96
Query: 63 VKLKEVIRENDILYFVFEYMECNLYQ-LMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGY 121
VKL + + L+ + E+ +M + E+ +E++++ C Q L Y+H
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 122 FHRDLKPENLLVSKD-TIKIADFGLA----REINSRPPFTEYVSTRWYRAPEVLL----Q 172
HRDLK N+L + D IK+ADFG++ R I R F + T ++ APEV++ +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSF---IGTPYWMAPEVVMCETSK 213
Query: 173 SYLYSSKVDMWAMGAIMAELITLRP 197
Y K D+W++G + E+ + P
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 110/205 (53%), Gaps = 16/205 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSHPNI 62
+++I E+GDG FG V++A +K++ + A K + K S EE + + E+ L HPNI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNI 96
Query: 63 VKLKEVIRENDILYFVFEYMECNLYQ-LMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGY 121
VKL + + L+ + E+ +M + E+ +E++++ C Q L Y+H
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 122 FHRDLKPENLLVSKD-TIKIADFGLA----REINSRPPFTEYVSTRWYRAPEVLL----Q 172
HRDLK N+L + D IK+ADFG++ R I R F + T ++ APEV++ +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF---IGTPYWMAPEVVMCETSK 213
Query: 173 SYLYSSKVDMWAMGAIMAELITLRP 197
Y K D+W++G + E+ + P
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 133/276 (48%), Gaps = 32/276 (11%)
Query: 9 EVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEV 68
++G+G+ G V A + SG++VA+KKM + E + EV +R H N+V++
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQHENVVEMYNS 89
Query: 69 IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKP 128
D L+ V E++E + + +E ++ C V Q L+ +H +G HRD+K
Sbjct: 90 YLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 148
Query: 129 ENLLVSKDT-IKIADFGLAREINSRPPFTE-YVSTRWYRAPEVLLQSYLYSSKVDMWAMG 186
+++L++ D +K++DFG +++ P + V T ++ APE L+ Y +VD+W++G
Sbjct: 149 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLG 207
Query: 187 AIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFPQLVGVPLS 246
++ E++ P + + I +D+ L + ++ P L G
Sbjct: 208 IMVIEMVDGEPPYFNEPPLKAMKMI--------RDNLPPRL---KNLHKVSPSLKG---- 252
Query: 247 VLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ L DP++R TAAE L+HPF
Sbjct: 253 ------------FLDRLLVRDPAQRATAAELLKHPF 276
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 37/285 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E +++ + +G G FG+V+ A KQS ++A+K + K + E REV+ +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 59 HPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY +Y+ ++ K F E + ++ L+Y H
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK-FDEQRTATYITELANALSYCH 130
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ S +KIADFG + S T Y PE +++ ++
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRXXLXGTLDYLPPE-MIEGRMH 188
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
KVD+W++G + E + +P F + E YK S + +
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYKRIS------------------RVEFT 229
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
FP V + A LI+ L +PS+RP E L+HP
Sbjct: 230 FPDFV-----------TEGARDLISRLLKHNPSQRPMLREVLEHP 263
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 117/220 (53%), Gaps = 8/220 (3%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
++Y +++G G G+V+ A+ +G+ VAI++M + +E + + E+ +R+ +PN
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENKNPN 79
Query: 62 IVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
IV + D L+ V EY+ +L ++ E C E ++ C + Q L ++H
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQ 137
Query: 121 YFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
HR++K +N+L+ D ++K+ DFG +I + + V T ++ APEV+ + Y
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA-YGP 196
Query: 179 KVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTP 218
KVD+W++G + E+I P + + +Y I + GTP
Sbjct: 197 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GTP 235
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 137/294 (46%), Gaps = 41/294 (13%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS------WEECVNLR-EVKSL 54
+ Y + K +G G G V A +++ + VAIK + K+ ++ + +N+ E++ L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 55 RKMSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGL 113
+K++HP I+K+K D Y V E ME L+ + ++ EA + + +Q+ +
Sbjct: 70 KKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKR-LKEATCKLYFYQMLLAV 127
Query: 114 AYMHQRGYFHRDLKPENLLVSKDT----IKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
Y+H+ G HRDLKPEN+L+S IKI DFG ++ + T Y APEV
Sbjct: 128 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 187
Query: 170 LLQ--SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGL 227
L+ + Y+ VD W++G I+ ++ P F TQ S D +
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR---------------TQVSLKDQI 232
Query: 228 LLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
+ Y F V +S + A+ L+ L DP R T EAL+HP
Sbjct: 233 TSGK---YNFIPEVWAEVS-------EKALDLVKKLLVVDPKARFTTEEALRHP 276
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 132/280 (47%), Gaps = 32/280 (11%)
Query: 9 EVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEV 68
++G+G+ G V A K +G+ VA+KKM + E + EV +R H N+V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELL-FNEVVIMRDYHHDNVVDMYSS 110
Query: 69 IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKP 128
D L+ V E++E + + +E ++ C V + L+Y+H +G HRD+K
Sbjct: 111 YLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIATVCLSVLRALSYLHNQGVIHRDIKS 169
Query: 129 ENLLVSKDT-IKIADFGLAREINSR-PPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMG 186
+++L++ D IK++DFG +++ P V T ++ APEV + Y ++VD+W++G
Sbjct: 170 DSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEV-ISRLPYGTEVDIWSLG 228
Query: 187 AIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFPQLVGVPLS 246
++ E+I P + + +I + +D L ++ F L+ V
Sbjct: 229 IMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKD-----LHKVSSVLRGFLDLMLV--- 280
Query: 247 VLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPFSRVA 286
+PS+R TA E L HPF ++A
Sbjct: 281 -------------------REPSQRATAQELLGHPFLKLA 301
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 110/205 (53%), Gaps = 16/205 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSHPNI 62
+++I E+GDG FG V++A +K++ + A K + K S EE + + E+ L HPNI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNI 96
Query: 63 VKLKEVIRENDILYFVFEYMECNLYQ-LMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGY 121
VKL + + L+ + E+ +M + E+ +E++++ C Q L Y+H
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 122 FHRDLKPENLLVSKD-TIKIADFGLA----REINSRPPFTEYVSTRWYRAPEVLL----Q 172
HRDLK N+L + D IK+ADFG++ R I R F + T ++ APEV++ +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXF---IGTPYWMAPEVVMCETSK 213
Query: 173 SYLYSSKVDMWAMGAIMAELITLRP 197
Y K D+W++G + E+ + P
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 142/289 (49%), Gaps = 37/289 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSHP 60
E ++++ E+GDG FG V++A +K++G + A K ++ K S EE + + E++ L HP
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHP 76
Query: 61 NIVKLKEVIRENDILYFVFEYMECNLYQ-LMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
IVKL + L+ + E+ +M + ++ +E +++ C Q+ + L ++H +
Sbjct: 77 YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 120 GYFHRDLKPENLLVS-KDTIKIADFGL-AREINSRPPFTEYVSTRWYRAPEVLLQSYL-- 175
HRDLK N+L++ + I++ADFG+ A+ + + ++ T ++ APEV++ +
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 176 --YSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y K D+W++G + E+ + P + + KI PT LL
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS-DPPT-------LLTPSKW 248
Query: 234 NYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ +F + + L +P RP+AA+ L+HPF
Sbjct: 249 SVEFRDFLKIALDK-------------------NPETRPSAAQLLEHPF 278
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 133/276 (48%), Gaps = 32/276 (11%)
Query: 9 EVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEV 68
++G+G+ G V A + SG++VA+KKM + E + EV +R H N+V++
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQHENVVEMYNS 85
Query: 69 IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKP 128
D L+ V E++E + + +E ++ C V Q L+ +H +G HRD+K
Sbjct: 86 YLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 144
Query: 129 ENLLVSKDT-IKIADFGLAREINSRPPFTE-YVSTRWYRAPEVLLQSYLYSSKVDMWAMG 186
+++L++ D +K++DFG +++ P + V T ++ APE L+ Y +VD+W++G
Sbjct: 145 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLG 203
Query: 187 AIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFPQLVGVPLS 246
++ E++ P + + I +D+ L + ++ P L G
Sbjct: 204 IMVIEMVDGEPPYFNEPPLKAMKMI--------RDNLPPRL---KNLHKVSPSLKG---- 248
Query: 247 VLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ L DP++R TAAE L+HPF
Sbjct: 249 ------------FLDRLLVRDPAQRATAAELLKHPF 272
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 133/276 (48%), Gaps = 32/276 (11%)
Query: 9 EVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEV 68
++G+G+ G V A + SG++VA+KKM + E + EV +R H N+V++
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQHENVVEMYNS 96
Query: 69 IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKP 128
D L+ V E++E + + +E ++ C V Q L+ +H +G HRD+K
Sbjct: 97 YLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 155
Query: 129 ENLLVSKDT-IKIADFGLAREINSRPPFTE-YVSTRWYRAPEVLLQSYLYSSKVDMWAMG 186
+++L++ D +K++DFG +++ P + V T ++ APE L+ Y +VD+W++G
Sbjct: 156 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLG 214
Query: 187 AIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFPQLVGVPLS 246
++ E++ P + + I +D+ L + ++ P L G
Sbjct: 215 IMVIEMVDGEPPYFNEPPLKAMKMI--------RDNLPPRL---KNLHKVSPSLKG---- 259
Query: 247 VLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ L DP++R TAAE L+HPF
Sbjct: 260 ------------FLDRLLVRDPAQRATAAELLKHPF 283
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 133/276 (48%), Gaps = 32/276 (11%)
Query: 9 EVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEV 68
++G+G+ G V A + SG++VA+KKM + E + EV +R H N+V++
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQHENVVEMYNS 94
Query: 69 IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKP 128
D L+ V E++E + + +E ++ C V Q L+ +H +G HRD+K
Sbjct: 95 YLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 153
Query: 129 ENLLVSKDT-IKIADFGLAREINSRPPFTE-YVSTRWYRAPEVLLQSYLYSSKVDMWAMG 186
+++L++ D +K++DFG +++ P + V T ++ APE L+ Y +VD+W++G
Sbjct: 154 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLG 212
Query: 187 AIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFPQLVGVPLS 246
++ E++ P + + I +D+ L + ++ P L G
Sbjct: 213 IMVIEMVDGEPPYFNEPPLKAMKMI--------RDNLPPRL---KNLHKVSPSLKG---- 257
Query: 247 VLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ L DP++R TAAE L+HPF
Sbjct: 258 ------------FLDRLLVRDPAQRATAAELLKHPF 281
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 128/282 (45%), Gaps = 32/282 (11%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
Y +++E+G G FG V R + K +G V + K Y ++ E+ + ++ HP ++
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVF-VAKFINTPYPLDKYTVKNEISIMNQLHHPKLI 111
Query: 64 KLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYF 122
L + + + + E++ L+ + + SEAEV N+ Q +GL +MH+
Sbjct: 112 NLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIV 171
Query: 123 HRDLKPENLLVSK---DTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSK 179
H D+KPEN++ ++KI DFGLA ++N +T + APE++ + +
Sbjct: 172 HLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPV-GFY 230
Query: 180 VDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFPQ 239
DMWA+G + L++ F G + + + + +D+++
Sbjct: 231 TDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFS--------------- 275
Query: 240 LVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
S + +A I +L +P KR T +AL+HP
Sbjct: 276 -----------SVSPEAKDFIKNLLQKEPRKRLTVHDALEHP 306
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 130/288 (45%), Gaps = 43/288 (14%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
++ + +G G F V A K +G++ A+K + KK +E E+ LRK+ H NIV
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 64 KLKEVIRENDILYFVFEYMECNLYQLMKDR--EKCF-SEAEVRNWCFQVFQGLAYMHQRG 120
L+++ + LY V + + + DR EK F +E + QV + Y+H+ G
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGG---ELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMG 140
Query: 121 YFHRDLKPENLL-VSKD---TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
HRDLKPENLL S+D I I+DFGL++ + T Y APEVL Q Y
Sbjct: 141 IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQK-PY 199
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEA---DEIYKICSVIGTPTQDSWADGLLLARAI 233
S VD W++G I L+ P F +++ ++I K +P D +D
Sbjct: 200 SKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDS------- 252
Query: 234 NYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
A I +L DP+KR T +A +HP
Sbjct: 253 ----------------------AKDFIRNLMEKDPNKRYTCEQAARHP 278
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 130/291 (44%), Gaps = 43/291 (14%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKY-------YSWEECVNLREVKSLRK 56
Y +E+G G F V + K +G A K +KK+ S E+ REV L++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 70
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
+ HPN++ L EV + + E + L+ + ++E +E E + Q+ G+ Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 116 MHQRGYFHRDLKPENLL-----VSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+H H DLKPEN++ V K IKI DFGLA +I+ F T + APE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
L + DMW++G I L++ G S +G Q++ A+
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLS------GAS---------PFLGDTKQETLAN----V 229
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
A+NY+F S L A I L DP KR T ++LQHP
Sbjct: 230 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 130/291 (44%), Gaps = 43/291 (14%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKY-------YSWEECVNLREVKSLRK 56
Y +E+G G F V + K +G A K +KK+ S E+ REV L++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 70
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
+ HPN++ L EV + + E + L+ + ++E +E E + Q+ G+ Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 116 MHQRGYFHRDLKPENLL-----VSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+H H DLKPEN++ V K IKI DFGLA +I+ F T + APE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
L + DMW++G I L++ G S +G Q++ A+
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLS------GAS---------PFLGDTKQETLAN----V 229
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
A+NY+F S L A I L DP KR T ++LQHP
Sbjct: 230 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 132/292 (45%), Gaps = 43/292 (14%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-------WEECVNLREVKSL 54
+ Y++ +E+G G F V + K +G+ A K +KK+ S EE REV L
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIE--REVNIL 62
Query: 55 RKMSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGL 113
R++ HPNI+ L ++ + + E + L+ + ++E +E E + Q+ G+
Sbjct: 63 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGV 121
Query: 114 AYMHQRGYFHRDLKPENLL-----VSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPE 168
Y+H + H DLKPEN++ V IK+ DFG+A +I + F T + APE
Sbjct: 122 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 181
Query: 169 VLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLL 228
++ L + DMW++G I L++ F G ++ + + I
Sbjct: 182 IVNYEPL-GLEADMWSIGVITYILLSGASPFLGETKQETLTNIS---------------- 224
Query: 229 LARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQH 280
A+NY F + S L A I L DP +R T A++L+H
Sbjct: 225 ---AVNYDFDEEYFSNTSEL-------AKDFIRRLLVKDPKRRMTIAQSLEH 266
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 127/291 (43%), Gaps = 43/291 (14%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKY-------YSWEECVNLREVKSLRK 56
Y +E+G G F V + K +G A K +KK+ S E+ REV L++
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 70
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
+ HPN++ L EV + + E + L+ + ++E +E E + Q+ G+ Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 116 MHQRGYFHRDLKPENLL-----VSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+H H DLKPEN++ V K IKI DFGLA +I+ F T + APE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
L + DMW++G I L++ F G D+ + L
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLANV 229
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
A+NY+F S L A I L DP KR T ++LQHP
Sbjct: 230 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 130/291 (44%), Gaps = 43/291 (14%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKY-------YSWEECVNLREVKSLRK 56
Y +E+G G F V + K +G A K +KK+ S E+ REV L++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 70
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
+ HPN++ L EV + + E + L+ + ++E +E E + Q+ G+ Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 116 MHQRGYFHRDLKPENLL-----VSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+H H DLKPEN++ V K IKI DFGLA +I+ F T + APE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
L + DMW++G I L++ G S +G Q++ A+
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLS------GAS---------PFLGDTKQETLAN----V 229
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
A+NY+F S L A I L DP KR T ++LQHP
Sbjct: 230 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 130/291 (44%), Gaps = 43/291 (14%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKY-------YSWEECVNLREVKSLRK 56
Y +E+G G F V + K +G A K +KK+ S E+ REV L++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 70
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
+ HPN++ L EV + + E + L+ + ++E +E E + Q+ G+ Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 116 MHQRGYFHRDLKPENLL-----VSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+H H DLKPEN++ V K IKI DFGLA +I+ F T + APE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
L + DMW++G I L++ G S +G Q++ A+
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLS------GAS---------PFLGDTKQETLAN----V 229
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
A+NY+F S L A I L DP KR T ++LQHP
Sbjct: 230 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 127/291 (43%), Gaps = 43/291 (14%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKY-------YSWEECVNLREVKSLRK 56
Y +E+G G F V + K +G A K +KK+ S E+ REV L++
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 70
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
+ HPN++ L EV + + E + L+ + ++E +E E + Q+ G+ Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 116 MHQRGYFHRDLKPENLL-----VSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+H H DLKPEN++ V K IKI DFGLA +I+ F T + APE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
L + DMW++G I L++ F G D+ + L
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLANV 229
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
A+NY+F S L A I L DP KR T ++LQHP
Sbjct: 230 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 108/222 (48%), Gaps = 9/222 (4%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY---SWEECVNLREVKSLRKMSHP 60
+ +K +G G+FG V A K A+K ++KK E+ + L+ + HP
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 61 NIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
+V L + D LYFV +Y+ RE+CF E R + ++ L Y+H
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN 159
Query: 121 YFHRDLKPENLLV-SKDTIKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
+RDLKPEN+L+ S+ I + DFGL +E I + + T Y APEV L Y
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEV-LHKQPYDR 218
Query: 179 KVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQ 220
VD W +GA++ E++ P F + A E+Y +++ P Q
Sbjct: 219 TVDWWCLGAVLYEMLYGLPPFYSRNTA-EMYD--NILNKPLQ 257
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 133/276 (48%), Gaps = 32/276 (11%)
Query: 9 EVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEV 68
++G+G+ G V A + SG++VA+KKM + E + EV +R H N+V++
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQHENVVEMYNS 139
Query: 69 IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKP 128
D L+ V E++E + + +E ++ C V Q L+ +H +G HRD+K
Sbjct: 140 YLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 198
Query: 129 ENLLVSKDT-IKIADFGLAREINSRPPFTE-YVSTRWYRAPEVLLQSYLYSSKVDMWAMG 186
+++L++ D +K++DFG +++ P + V T ++ APE L+ Y +VD+W++G
Sbjct: 199 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLG 257
Query: 187 AIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFPQLVGVPLS 246
++ E++ P + + I +D+ L + ++ P L G
Sbjct: 258 IMVIEMVDGEPPYFNEPPLKAMKMI--------RDNLPPRL---KNLHKVSPSLKG---- 302
Query: 247 VLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ L DP++R TAAE L+HPF
Sbjct: 303 ------------FLDRLLVRDPAQRATAAELLKHPF 326
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 127/291 (43%), Gaps = 43/291 (14%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKY-------YSWEECVNLREVKSLRK 56
Y +E+G G F V + K +G A K +KK+ S E+ REV L++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 69
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
+ HPN++ L EV + + E + L+ + ++E +E E + Q+ G+ Y
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 128
Query: 116 MHQRGYFHRDLKPENLL-----VSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+H H DLKPEN++ V K IKI DFGLA +I+ F T + APE++
Sbjct: 129 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 188
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
L + DMW++G I L++ F G D+ + L
Sbjct: 189 NYEPL-GLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLANV 228
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
A+NY+F S L A I L DP KR T ++LQHP
Sbjct: 229 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHP 272
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 127/291 (43%), Gaps = 43/291 (14%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKY-------YSWEECVNLREVKSLRK 56
Y +E+G G F V + K +G A K +KK+ S E+ REV L++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 70
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
+ HPN++ L EV + + E + L+ + ++E +E E + Q+ G+ Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 116 MHQRGYFHRDLKPENLL-----VSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+H H DLKPEN++ V K IKI DFGLA +I+ F T + APE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
L + DMW++G I L++ F G D+ + L
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLANV 229
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
A+NY+F S L A I L DP KR T ++LQHP
Sbjct: 230 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 141/289 (48%), Gaps = 36/289 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E + +++++G+G++GSV++AI K++G++VAIK++ + E ++E+ +++ P+
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQE---IIKEISIMQQCDSPH 85
Query: 62 IVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
+VK +N L+ V EY ++ +++ R K +E E+ +GL Y+H
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR 145
Query: 121 YFHRDLKPENLLVSKDT-IKIADFGLAREI-NSRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
HRD+K N+L++ + K+ADFG+A ++ + + T ++ APEV +Q Y+
Sbjct: 146 KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEV-IQEIGYNC 204
Query: 179 KVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFP 238
D+W++G E+ +P + +I+ + ++ PT
Sbjct: 205 VADIWSLGITAIEMAEGKPPYA------DIHPMRAIFMIPTNP----------------- 241
Query: 239 QLVGVPLSVLMPSANKDAVSLIASLC-SWDPSKRPTAAEALQHPFSRVA 286
P + P D + C P +R TA + LQHPF R A
Sbjct: 242 -----PPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSA 285
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 133/293 (45%), Gaps = 39/293 (13%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS------WEECVNLR-EVKSL 54
+ Y + K +G G G V A +++ + VAI+ + K+ ++ + +N+ E++ L
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 55 RKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
+K++HP I+K+K D Y V E ME K EA + + +Q+ +
Sbjct: 209 KKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 267
Query: 115 YMHQRGYFHRDLKPENLLVSKDT----IKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
Y+H+ G HRDLKPEN+L+S IKI DFG ++ + T Y APEVL
Sbjct: 268 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 327
Query: 171 LQ--SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLL 228
+ + Y+ VD W++G I+ ++ P F TQ S D +
Sbjct: 328 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR---------------TQVSLKDQIT 372
Query: 229 LARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
+ Y F V +S + A+ L+ L DP R T EAL+HP
Sbjct: 373 SGK---YNFIPEVWAEVS-------EKALDLVKKLLVVDPKARFTTEEALRHP 415
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 127/291 (43%), Gaps = 43/291 (14%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKY-------YSWEECVNLREVKSLRK 56
Y +E+G G F V + K +G A K +KK+ S E+ REV L++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 70
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
+ HPN++ L EV + + E + L+ + ++E +E E + Q+ G+ Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 116 MHQRGYFHRDLKPENLL-----VSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+H H DLKPEN++ V K IKI DFGLA +I+ F T + APE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
L + DMW++G I L++ F G D+ + L
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLANV 229
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
A+NY+F S L A I L DP KR T ++LQHP
Sbjct: 230 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 129/291 (44%), Gaps = 43/291 (14%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKY-------YSWEECVNLREVKSLRK 56
Y +E+G G F V + K +G A K +KK+ S E+ REV L++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 70
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
+ HPN++ L EV + + E + L+ + ++E +E E + Q+ G+ Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 116 MHQRGYFHRDLKPENLL-----VSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+H H DLKPEN++ V K IKI DFGLA +I+ F T + APE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
L + DMW++G I L++ F +G Q++ A+
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPF---------------LGDTKQETLAN----V 229
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
A+NY+F S L A I L DP KR T ++LQHP
Sbjct: 230 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 127/291 (43%), Gaps = 43/291 (14%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKY-------YSWEECVNLREVKSLRK 56
Y +E+G G F V + K +G A K +KK+ S E+ REV L++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 69
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
+ HPN++ L EV + + E + L+ + ++E +E E + Q+ G+ Y
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 128
Query: 116 MHQRGYFHRDLKPENLL-----VSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+H H DLKPEN++ V K IKI DFGLA +I+ F T + APE++
Sbjct: 129 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 188
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
L + DMW++G I L++ F G D+ + L
Sbjct: 189 NYEPL-GLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLANV 228
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
A+NY+F S L A I L DP KR T ++LQHP
Sbjct: 229 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHP 272
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 127/291 (43%), Gaps = 43/291 (14%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKY-------YSWEECVNLREVKSLRK 56
Y +E+G G F V + K +G A K +KK+ S E+ REV L++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 70
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
+ HPN++ L EV + + E + L+ + ++E +E E + Q+ G+ Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 116 MHQRGYFHRDLKPENLL-----VSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+H H DLKPEN++ V K IKI DFGLA +I+ F T + APE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIV 189
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
L + DMW++G I L++ F G D+ + L
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLANV 229
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
A+NY+F S L A I L DP KR T ++LQHP
Sbjct: 230 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 105/194 (54%), Gaps = 11/194 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+RY+L+K++G G FG KQS E+VA+K +++ +E V RE+ + R + HPN
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG-EKIDENVK-REIINHRSLRHPN 76
Query: 62 IVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
IV+ KEVI L V EY L++ + + + FSE E R + Q+ G++Y H
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARFFFQQLISGVSYCHAMQ 135
Query: 121 YFHRDLKPENLLVSKDT---IKIADFGLARE--INSRPPFTEYVSTRWYRAPEVLLQSYL 175
HRDLK EN L+ +KI FG ++ ++S+P T V T Y APEVLL+
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKEY 193
Query: 176 YSSKVDMWAMGAIM 189
D+W+ G +
Sbjct: 194 DGKVADVWSCGVTL 207
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 133/293 (45%), Gaps = 39/293 (13%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS------WEECVNLR-EVKSL 54
+ Y + K +G G G V A +++ + VAI+ + K+ ++ + +N+ E++ L
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 55 RKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
+K++HP I+K+K D Y V E ME K EA + + +Q+ +
Sbjct: 195 KKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 253
Query: 115 YMHQRGYFHRDLKPENLLVSKDT----IKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
Y+H+ G HRDLKPEN+L+S IKI DFG ++ + T Y APEVL
Sbjct: 254 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 313
Query: 171 LQ--SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLL 228
+ + Y+ VD W++G I+ ++ P F TQ S D +
Sbjct: 314 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR---------------TQVSLKDQIT 358
Query: 229 LARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
+ Y F V +S + A+ L+ L DP R T EAL+HP
Sbjct: 359 SGK---YNFIPEVWAEVS-------EKALDLVKKLLVVDPKARFTTEEALRHP 401
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 127/291 (43%), Gaps = 43/291 (14%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKY-------YSWEECVNLREVKSLRK 56
Y +E+G G F V + K +G A K +KK+ S E+ REV L++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 70
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
+ HPN++ L EV + + E + L+ + ++E +E E + Q+ G+ Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 116 MHQRGYFHRDLKPENLL-----VSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+H H DLKPEN++ V K IKI DFGLA +I+ F T + APE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
L + DMW++G I L++ F G D+ + L
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLANV 229
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
A+NY+F S L A I L DP KR T ++LQHP
Sbjct: 230 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 130/283 (45%), Gaps = 37/283 (13%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
Y L +G G++G V A+ K + A KK+ K Y+ + +E++ ++ + HPNI+
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPK-YFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 64 KLKEVIRENDILYFVFEYMECNLYQLMKD--REKCFSEAEVRNWCFQVFQGLAYMHQRGY 121
+L E +N +Y V E C +L + ++ F E++ V +AY H+
Sbjct: 87 RLYETFEDNTDIYLVMEL--CTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV 144
Query: 122 FHRDLKPENLLVSKDT----IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
HRDLKPEN L D+ +K+ DFGLA V T +Y +P+VL LY
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL--EGLYG 202
Query: 178 SKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKF 237
+ D W+ G +M L+ P F ++ + + KI R + F
Sbjct: 203 PECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKI-------------------REGTFTF 243
Query: 238 PQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQH 280
P+ + +S P A SLI L + P +R T+ +AL+H
Sbjct: 244 PEKDWLNVS---PQAE----SLIRRLLTKSPKQRITSLQALEH 279
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 127/282 (45%), Gaps = 37/282 (13%)
Query: 8 KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLR-KMSHPNIVK 64
KE+G G F V + ISK +G+ A K +KK+ ++C L E+ L S P ++
Sbjct: 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG-QDCRAEILHEIAVLELAKSCPRVIN 93
Query: 65 LKEVIRENDILYFVFEYMECN-LYQL-MKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYF 122
L EV + + EY ++ L + + + SE +V Q+ +G+ Y+HQ
Sbjct: 94 LHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIV 153
Query: 123 HRDLKPENLLVSK----DTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
H DLKP+N+L+S IKI DFG++R+I E + T Y APE+L + ++
Sbjct: 154 HLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPI-TT 212
Query: 179 KVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFP 238
DMW +G I L+T F G + I V ++++++
Sbjct: 213 ATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFS-------------- 258
Query: 239 QLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQH 280
S ++ A I SL +P KRPTA L H
Sbjct: 259 ------------SVSQLATDFIQSLLVKNPEKRPTAEICLSH 288
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 105/194 (54%), Gaps = 11/194 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+RY+L+K++G G FG KQS E+VA+K +++ +E V RE+ + R + HPN
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG-EKIDENVK-REIINHRSLRHPN 76
Query: 62 IVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
IV+ KEVI L V EY L++ + + + FSE E R + Q+ G++Y H
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARFFFQQLISGVSYCHAMQ 135
Query: 121 YFHRDLKPENLLVSKDT---IKIADFGLARE--INSRPPFTEYVSTRWYRAPEVLLQSYL 175
HRDLK EN L+ +KI FG ++ ++S+P T V T Y APEVLL+
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT--VGTPAYIAPEVLLKKEY 193
Query: 176 YSSKVDMWAMGAIM 189
D+W+ G +
Sbjct: 194 DGKVADVWSCGVTL 207
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 130/283 (45%), Gaps = 37/283 (13%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
Y L +G G++G V A+ K + A KK+ K Y+ + +E++ ++ + HPNI+
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPK-YFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 64 KLKEVIRENDILYFVFEYMECNLYQLMKD--REKCFSEAEVRNWCFQVFQGLAYMHQRGY 121
+L E +N +Y V E C +L + ++ F E++ V +AY H+
Sbjct: 70 RLYETFEDNTDIYLVMEL--CTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV 127
Query: 122 FHRDLKPENLLVSKDT----IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
HRDLKPEN L D+ +K+ DFGLA V T +Y +P+VL LY
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL--EGLYG 185
Query: 178 SKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKF 237
+ D W+ G +M L+ P F ++ + + KI R + F
Sbjct: 186 PECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKI-------------------REGTFTF 226
Query: 238 PQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQH 280
P+ + +S P A SLI L + P +R T+ +AL+H
Sbjct: 227 PEKDWLNVS---PQAE----SLIRRLLTKSPKQRITSLQALEH 262
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 134/287 (46%), Gaps = 36/287 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ Y++ +++G G++ R I K + A+K + K E + + LR HPN
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEIL----LRYGQHPN 77
Query: 62 IVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGY 121
I+ LK+V + +Y V E M+ R+K FSE E F + + + Y+H +G
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGV 137
Query: 122 FHRDLKPENLLV-----SKDTIKIADFGLAREINSRPP-FTEYVSTRWYRAPEVLLQSYL 175
HRDLKP N+L + ++I+I DFG A+++ + T + APEV L+
Sbjct: 138 VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEV-LERQG 196
Query: 176 YSSKVDMWAMGAIMAELIT-LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
Y + D+W++G ++ ++T P G + TP + +LAR +
Sbjct: 197 YDAACDIWSLGVLLYTMLTGYTPFANGPDD------------TPEE-------ILARIGS 237
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
KF G SV + A L++ + DP +R TAA L+HP
Sbjct: 238 GKFSLSGGYWNSV-----SDTAKDLVSKMLHVDPHQRLTAALVLRHP 279
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 142/333 (42%), Gaps = 79/333 (23%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKS----LRKM 57
++Y L +G G++G V AI Q+ + AIK M K ++ +K+ ++K+
Sbjct: 26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL 85
Query: 58 SHPNIVKLKEVIRENDILYFVFEYM---------------------------------EC 84
HPNI +L EV + + V E EC
Sbjct: 86 HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPEC 145
Query: 85 N-------LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDT 137
N ++ + + E + N Q+F L Y+H +G HRD+KPEN L S +
Sbjct: 146 NEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNK 205
Query: 138 ---IKIADFGLARE---INSRPPF--TEYVSTRWYRAPEVL-LQSYLYSSKVDMWAMGAI 188
IK+ DFGL++E +N+ + T T ++ APEVL + Y K D W+ G +
Sbjct: 206 SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265
Query: 189 MAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFPQLVGVPLSVL 248
+ L+ FPG ++AD I ++ L + + ++ P +VL
Sbjct: 266 LHLLLMGAVPFPGVNDADTISQV-----------------LNKKLCFENPN-----YNVL 303
Query: 249 MPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
P A L+++L + + +R A ALQHP
Sbjct: 304 SPLAR----DLLSNLLNRNVDERFDAMRALQHP 332
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 104/194 (53%), Gaps = 11/194 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+RY +K++G G FG K + E+VA+K +++ + +E V RE+ + R + HPN
Sbjct: 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQ-REIINHRSLRHPN 77
Query: 62 IVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
IV+ KEVI L + EY LY+ + + + FSE E R + Q+ G++Y H
Sbjct: 78 IVRFKEVILTPTHLAIIMEYASGGELYERICNAGR-FSEDEARFFFQQLLSGVSYCHSMQ 136
Query: 121 YFHRDLKPENLLVSKDT---IKIADFGLARE--INSRPPFTEYVSTRWYRAPEVLLQSYL 175
HRDLK EN L+ +KI DFG ++ ++S+P T V T Y APEVLL+
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLRQEY 194
Query: 176 YSSKVDMWAMGAIM 189
D+W+ G +
Sbjct: 195 DGKIADVWSCGVTL 208
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 111/212 (52%), Gaps = 11/212 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSH 59
E +K K +G+G+F +V A + AIK ++K++ E V RE + ++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREK--CFSEAEVRNWCFQVFQGLAYMH 117
P VKL ++++ LYF Y + +L+K K F E R + ++ L Y+H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLAREI---NSRPPFTEYVSTRWYRAPEVLLQS 173
+G HRDLKPEN+L+++D I+I DFG A+ + + + +V T Y +PE+L +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEA 205
S D+WA+G I+ +L+ P F +E
Sbjct: 210 SAXKSS-DLWALGCIIYQLVAGLPPFRAGNEG 240
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 142/304 (46%), Gaps = 45/304 (14%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL----REVKSLRKMSH 59
Y+L + +G G F V R I++++G+ A+K + ++ ++ RE + H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 60 PNIVKLKEVIRENDILYFVFEYMECN--LYQLMKDREKCF--SEAEVRNWCFQVFQGLAY 115
P+IV+L E + +LY VFE+M+ ++++K + F SEA ++ Q+ + L Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 116 MHQRGYFHRDLKPEN-LLVSKDT---IKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVL 170
H HRD+KPEN LL SK+ +K+ DFG+A ++ S V T + APEV+
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ Y VD+W G I+ L++ F GT E +G++
Sbjct: 206 KRE-PYGKPVDVWGCGVILFILLSGCLPFYGTKE-----------------RLFEGIIKG 247
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF----SRVA 286
+ YK +S + A L+ + DP++R T EAL HP+ R A
Sbjct: 248 K---YKMNPRQWSHIS-------ESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYA 297
Query: 287 FMFH 290
+ H
Sbjct: 298 YKIH 301
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 127/291 (43%), Gaps = 43/291 (14%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKY-------YSWEECVNLREVKSLRK 56
Y +E+G G F V + K +G A K +KK+ S E+ REV L++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 70
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
+ HPN++ L EV + + E + L+ + ++E +E E + Q+ G+ Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 116 MHQRGYFHRDLKPENLL-----VSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+H H DLKPEN++ V K IKI DFGLA +I+ F T + APE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
L + DMW++G I L++ F G D+ + L
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLANV 229
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
A+NY+F S L A I L DP KR T ++LQHP
Sbjct: 230 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 131/292 (44%), Gaps = 43/292 (14%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY-------SWEECVNLREVKSL 54
+ Y++ +E+G G F V + K +G+ A K +KK+ S EE REV L
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIE--REVNIL 83
Query: 55 RKMSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGL 113
R++ HPNI+ L ++ + + E + L+ + ++E +E E + Q+ G+
Sbjct: 84 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGV 142
Query: 114 AYMHQRGYFHRDLKPENLL-----VSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPE 168
Y+H + H DLKPEN++ V IK+ DFG+A +I + F T + APE
Sbjct: 143 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 202
Query: 169 VLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLL 228
++ L + DMW++G I L++ F G ++ + + I
Sbjct: 203 IVNYEPL-GLEADMWSIGVITYILLSGASPFLGETKQETLTNIS---------------- 245
Query: 229 LARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQH 280
A+NY F + S L A I L DP +R A++L+H
Sbjct: 246 ---AVNYDFDEEYFSNTSEL-------AKDFIRRLLVKDPKRRMXIAQSLEH 287
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 133/276 (48%), Gaps = 32/276 (11%)
Query: 9 EVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEV 68
++G+G+ G V A + SG++VA+KKM + E + EV +R H N+V++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQHENVVEMYNS 216
Query: 69 IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKP 128
D L+ V E++E + + +E ++ C V Q L+ +H +G HRD+K
Sbjct: 217 YLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 275
Query: 129 ENLLVSKDT-IKIADFGLAREINSRPPFTE-YVSTRWYRAPEVLLQSYLYSSKVDMWAMG 186
+++L++ D +K++DFG +++ P + V T ++ APE L+ Y +VD+W++G
Sbjct: 276 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLG 334
Query: 187 AIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFPQLVGVPLS 246
++ E++ P + + I +D+ L + ++ P L G
Sbjct: 335 IMVIEMVDGEPPYFNEPPLKAMKMI--------RDNLPPRL---KNLHKVSPSLKG---- 379
Query: 247 VLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+ L DP++R TAAE L+HPF
Sbjct: 380 ------------FLDRLLVRDPAQRATAAELLKHPF 403
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 131/292 (44%), Gaps = 43/292 (14%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-------WEECVNLREVKSL 54
+ Y++ +E+G G F V + K +G+ A K +KK+ S EE REV L
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIE--REVNIL 69
Query: 55 RKMSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGL 113
R++ HPNI+ L ++ + + E + L+ + ++E +E E + Q+ G+
Sbjct: 70 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGV 128
Query: 114 AYMHQRGYFHRDLKPENLL-----VSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPE 168
Y+H + H DLKPEN++ V IK+ DFG+A +I + F T + APE
Sbjct: 129 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 188
Query: 169 VLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLL 228
++ L + DMW++G I L++ F G ++ + + I
Sbjct: 189 IVNYEPL-GLEADMWSIGVITYILLSGASPFLGETKQETLTNIS---------------- 231
Query: 229 LARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQH 280
A+NY F + S L A I L DP +R A++L+H
Sbjct: 232 ---AVNYDFDEEYFSNTSEL-------AKDFIRRLLVKDPKRRMXIAQSLEH 273
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 14/203 (6%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIK--KMKKKYYSWEECVNLREVKSLRKM- 57
+E + L++ +G+G +G V A+++ + E VA+K MK+ E N+++ + KM
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICINKML 61
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREK--CFSEAEVRNWCFQVFQGLAY 115
+H N+VK RE +I Y EY C+ +L E E + + + Q+ G+ Y
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 116 MHQRGYFHRDLKPENLLVS-KDTIKIADFGLA---REINSRPPFTEYVSTRWYRAPEVLL 171
+H G HRD+KPENLL+ +D +KI+DFGLA R N + T Y APE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 172 QSYLYSSKVDMWAMGAIMAELIT 194
+ ++ VD+W+ G ++ ++
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLA 202
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 14/203 (6%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIK--KMKKKYYSWEECVNLREVKSLRKM- 57
+E + L++ +G+G +G V A+++ + E VA+K MK+ E N+++ + KM
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICINKML 62
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREK--CFSEAEVRNWCFQVFQGLAY 115
+H N+VK RE +I Y EY C+ +L E E + + + Q+ G+ Y
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 116 MHQRGYFHRDLKPENLLVS-KDTIKIADFGLA---REINSRPPFTEYVSTRWYRAPEVLL 171
+H G HRD+KPENLL+ +D +KI+DFGLA R N + T Y APE+L
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 172 QSYLYSSKVDMWAMGAIMAELIT 194
+ ++ VD+W+ G ++ ++
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLA 203
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 14/203 (6%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIK--KMKKKYYSWEECVNLREVKSLRKM- 57
+E + L++ +G+G +G V A+++ + E VA+K MK+ E N+++ + KM
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICINKML 62
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFS--EAEVRNWCFQVFQGLAY 115
+H N+VK RE +I Y EY C+ +L E E + + + Q+ G+ Y
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 116 MHQRGYFHRDLKPENLLVS-KDTIKIADFGLA---REINSRPPFTEYVSTRWYRAPEVLL 171
+H G HRD+KPENLL+ +D +KI+DFGLA R N + T Y APE+L
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 172 QSYLYSSKVDMWAMGAIMAELIT 194
+ ++ VD+W+ G ++ ++
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLA 203
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 14/203 (6%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIK--KMKKKYYSWEECVNLREVKSLRKM- 57
+E + L++ +G+G +G V A+++ + E VA+K MK+ E N+++ + KM
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICINKML 62
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFS--EAEVRNWCFQVFQGLAY 115
+H N+VK RE +I Y EY C+ +L E E + + + Q+ G+ Y
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 116 MHQRGYFHRDLKPENLLVS-KDTIKIADFGLA---REINSRPPFTEYVSTRWYRAPEVLL 171
+H G HRD+KPENLL+ +D +KI+DFGLA R N + T Y APE+L
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 172 QSYLYSSKVDMWAMGAIMAELIT 194
+ ++ VD+W+ G ++ ++
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLA 203
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 14/203 (6%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIK--KMKKKYYSWEECVNLREVKSLRKM- 57
+E + L++ +G+G +G V A+++ + E VA+K MK+ E N+++ + KM
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICINKML 62
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFS--EAEVRNWCFQVFQGLAY 115
+H N+VK RE +I Y EY C+ +L E E + + + Q+ G+ Y
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 116 MHQRGYFHRDLKPENLLVS-KDTIKIADFGLA---REINSRPPFTEYVSTRWYRAPEVLL 171
+H G HRD+KPENLL+ +D +KI+DFGLA R N + T Y APE+L
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 172 QSYLYSSKVDMWAMGAIMAELIT 194
+ ++ VD+W+ G ++ ++
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLA 203
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 134/281 (47%), Gaps = 42/281 (14%)
Query: 9 EVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEV 68
++G+G+ G V A K SG VA+K M + E + EV +R H N+V++ +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELL-FNEVVIMRDYQHFNVVEMYKS 110
Query: 69 IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKP 128
+ L+ + E+++ + + + +E ++ C V Q LAY+H +G HRD+K
Sbjct: 111 YLVGEELWVLMEFLQGGALTDIVSQVR-LNEEQIATVCEAVLQALAYLHAQGVIHRDIKS 169
Query: 129 ENLLVSKDT-IKIADFGLAREINSR-PPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMG 186
+++L++ D +K++DFG +I+ P V T ++ APEV+ +S LY+++VD+W++G
Sbjct: 170 DSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRS-LYATEVDIWSLG 228
Query: 187 AIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFPQLVGVPLS 246
++ E++ P + S P Q + R + P+L
Sbjct: 229 IMVIEMVDGEPPYFSDS--------------PVQ-------AMKRLRDSPPPKL------ 261
Query: 247 VLMPSANKDAVS-----LIASLCSWDPSKRPTAAEALQHPF 282
N VS + + DP +R TA E L HPF
Sbjct: 262 -----KNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPF 297
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 11/211 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSH 59
E +K K +G+G+F +V A + AIK ++K++ E V RE + ++ H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREK--CFSEAEVRNWCFQVFQGLAYMH 117
P VKL ++++ LYF Y + +L+K K F E R + ++ L Y+H
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 152
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLAREI---NSRPPFTEYVSTRWYRAPEVLLQS 173
+G HRDLKPEN+L+++D I+I DFG A+ + + + +V T Y +PE+L +
Sbjct: 153 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 212
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSE 204
S D+WA+G I+ +L+ P F +E
Sbjct: 213 SACKSS-DLWALGCIIYQLVAGLPPFRAGNE 242
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 111/212 (52%), Gaps = 11/212 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSH 59
E +K K +G+G+F +V A + AIK ++K++ E V RE + ++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREK--CFSEAEVRNWCFQVFQGLAYMH 117
P VKL ++++ LYF Y + +L+K K F E R + ++ L Y+H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLAREI---NSRPPFTEYVSTRWYRAPEVLLQS 173
+G HRDLKPEN+L+++D I+I DFG A+ + + + +V T Y +PE+L +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEA 205
S D+WA+G I+ +L+ P F +E
Sbjct: 210 SACKSS-DLWALGCIIYQLVAGLPPFRAGNEG 240
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 14/203 (6%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIK--KMKKKYYSWEECVNLREVKSLRKM- 57
+E + L++ +G+G +G V A+++ + E VA+K MK+ E N+++ + KM
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICINKML 61
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFS--EAEVRNWCFQVFQGLAY 115
+H N+VK RE +I Y EY C+ +L E E + + + Q+ G+ Y
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 116 MHQRGYFHRDLKPENLLVS-KDTIKIADFGLA---REINSRPPFTEYVSTRWYRAPEVLL 171
+H G HRD+KPENLL+ +D +KI+DFGLA R N + T Y APE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 172 QSYLYSSKVDMWAMGAIMAELIT 194
+ ++ VD+W+ G ++ ++
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLA 202
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 14/203 (6%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIK--KMKKKYYSWEECVNLREVKSLRKM- 57
+E + L++ +G+G +G V A+++ + E VA+K MK+ E N+++ + KM
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICINKML 62
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFS--EAEVRNWCFQVFQGLAY 115
+H N+VK RE +I Y EY C+ +L E E + + + Q+ G+ Y
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 116 MHQRGYFHRDLKPENLLVS-KDTIKIADFGLA---REINSRPPFTEYVSTRWYRAPEVLL 171
+H G HRD+KPENLL+ +D +KI+DFGLA R N + T Y APE+L
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 172 QSYLYSSKVDMWAMGAIMAELIT 194
+ ++ VD+W+ G ++ ++
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLA 203
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 7/209 (3%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSH 59
E +K K +G+G+F +V A + AIK ++K++ E V RE + ++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
P VKL ++++ LYF Y + + F E R + ++ L Y+H +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 120 GYFHRDLKPENLLVSKDT-IKIADFGLAREI---NSRPPFTEYVSTRWYRAPEVLLQSYL 175
G HRDLKPEN+L+++D I+I DFG A+ + + + +V T Y +PE+L +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 211
Query: 176 YSSKVDMWAMGAIMAELITLRPLFPGTSE 204
S D+WA+G I+ +L+ P F +E
Sbjct: 212 -SKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 14/203 (6%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIK--KMKKKYYSWEECVNLREVKSLRKM- 57
+E + L++ +G+G +G V A+++ + E VA+K MK+ E N+++ + KM
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICINKML 61
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFS--EAEVRNWCFQVFQGLAY 115
+H N+VK RE +I Y EY C+ +L E E + + + Q+ G+ Y
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 116 MHQRGYFHRDLKPENLLVS-KDTIKIADFGLA---REINSRPPFTEYVSTRWYRAPEVLL 171
+H G HRD+KPENLL+ +D +KI+DFGLA R N + T Y APE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 172 QSYLYSSKVDMWAMGAIMAELIT 194
+ ++ VD+W+ G ++ ++
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLA 202
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 108/201 (53%), Gaps = 10/201 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
+E + L++ +G+G +G V A+++ + E VA+K + K+ E + +E+ + ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-KEIXINKMLNH 63
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFS--EAEVRNWCFQVFQGLAYMH 117
N+VK RE +I Y EY C+ +L E E + + + Q+ G+ Y+H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 118 QRGYFHRDLKPENLLVS-KDTIKIADFGLA---REINSRPPFTEYVSTRWYRAPEVLLQS 173
G HRD+KPENLL+ +D +KI+DFGLA R N + T Y APE+L +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 174 YLYSSKVDMWAMGAIMAELIT 194
++ VD+W+ G ++ ++
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLA 202
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 14/203 (6%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIK--KMKKKYYSWEECVNLREVKSLRKM- 57
+E + L++ +G+G +G V A+++ + E VA+K MK+ E N+++ + KM
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICINKML 60
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFS--EAEVRNWCFQVFQGLAY 115
+H N+VK RE +I Y EY C+ +L E E + + + Q+ G+ Y
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 118
Query: 116 MHQRGYFHRDLKPENLLVS-KDTIKIADFGLA---REINSRPPFTEYVSTRWYRAPEVLL 171
+H G HRD+KPENLL+ +D +KI+DFGLA R N + T Y APE+L
Sbjct: 119 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178
Query: 172 QSYLYSSKVDMWAMGAIMAELIT 194
+ ++ VD+W+ G ++ ++
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLA 201
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 14/203 (6%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIK--KMKKKYYSWEECVNLREVKSLRKM- 57
+E + L++ +G+G +G V A+++ + E VA+K MK+ E N+++ + KM
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICINKML 61
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFS--EAEVRNWCFQVFQGLAY 115
+H N+VK RE +I Y EY C+ +L E E + + + Q+ G+ Y
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 116 MHQRGYFHRDLKPENLLVS-KDTIKIADFGLA---REINSRPPFTEYVSTRWYRAPEVLL 171
+H G HRD+KPENLL+ +D +KI+DFGLA R N + T Y APE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 172 QSYLYSSKVDMWAMGAIMAELIT 194
+ ++ VD+W+ G ++ ++
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLA 202
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 14/203 (6%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIK--KMKKKYYSWEECVNLREVKSLRKM- 57
+E + L++ +G+G +G V A+++ + E VA+K MK+ E N+++ + KM
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICINKML 61
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFS--EAEVRNWCFQVFQGLAY 115
+H N+VK RE +I Y EY C+ +L E E + + + Q+ G+ Y
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 116 MHQRGYFHRDLKPENLLVS-KDTIKIADFGLA---REINSRPPFTEYVSTRWYRAPEVLL 171
+H G HRD+KPENLL+ +D +KI+DFGLA R N + T Y APE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 172 QSYLYSSKVDMWAMGAIMAELIT 194
+ ++ VD+W+ G ++ ++
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLA 202
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 14/203 (6%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIK--KMKKKYYSWEECVNLREVKSLRKM- 57
+E + L++ +G+G +G V A+++ + E VA+K MK+ E N+++ + KM
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICINKML 61
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFS--EAEVRNWCFQVFQGLAY 115
+H N+VK RE +I Y EY C+ +L E E + + + Q+ G+ Y
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 116 MHQRGYFHRDLKPENLLVS-KDTIKIADFGLA---REINSRPPFTEYVSTRWYRAPEVLL 171
+H G HRD+KPENLL+ +D +KI+DFGLA R N + T Y APE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 172 QSYLYSSKVDMWAMGAIMAELIT 194
+ ++ VD+W+ G ++ ++
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLA 202
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 14/203 (6%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIK--KMKKKYYSWEECVNLREVKSLRKM- 57
+E + L++ +G+G +G V A+++ + E VA+K MK+ E N+++ + KM
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICINKML 62
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFS--EAEVRNWCFQVFQGLAY 115
+H N+VK RE +I Y EY C+ +L E E + + + Q+ G+ Y
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 116 MHQRGYFHRDLKPENLLVS-KDTIKIADFGLA---REINSRPPFTEYVSTRWYRAPEVLL 171
+H G HRD+KPENLL+ +D +KI+DFGLA R N + T Y APE+L
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 172 QSYLYSSKVDMWAMGAIMAELIT 194
+ ++ VD+W+ G ++ ++
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLA 203
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 11/211 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSH 59
E +K K +G+G+F +V A + AIK ++K++ E V RE + ++ H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREK--CFSEAEVRNWCFQVFQGLAYMH 117
P VKL ++++ LYF Y + +L+K K F E R + ++ L Y+H
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 150
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLAREI---NSRPPFTEYVSTRWYRAPEVLLQS 173
+G HRDLKPEN+L+++D I+I DFG A+ + + + +V T Y +PE+L +
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 210
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSE 204
S D+WA+G I+ +L+ P F +E
Sbjct: 211 SACKSS-DLWALGCIIYQLVAGLPPFRAGNE 240
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 108/201 (53%), Gaps = 10/201 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
+E + L++ +G+G +G V A+++ + E VA+K + K+ E + +E+ + ++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-KEIXINKMLNH 64
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFS--EAEVRNWCFQVFQGLAYMH 117
N+VK RE +I Y EY C+ +L E E + + + Q+ G+ Y+H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 118 QRGYFHRDLKPENLLVS-KDTIKIADFGLA---REINSRPPFTEYVSTRWYRAPEVLLQS 173
G HRD+KPENLL+ +D +KI+DFGLA R N + T Y APE+L +
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 182
Query: 174 YLYSSKVDMWAMGAIMAELIT 194
++ VD+W+ G ++ ++
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLA 203
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 108/201 (53%), Gaps = 10/201 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSH 59
+E + L++ +G+G +G V A+++ + E VA+K + K+ E + +E+ + ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-KEIXINKMLNH 63
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFS--EAEVRNWCFQVFQGLAYMH 117
N+VK RE +I Y EY C+ +L E E + + + Q+ G+ Y+H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 118 QRGYFHRDLKPENLLVS-KDTIKIADFGLA---REINSRPPFTEYVSTRWYRAPEVLLQS 173
G HRD+KPENLL+ +D +KI+DFGLA R N + T Y APE+L +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 174 YLYSSKVDMWAMGAIMAELIT 194
++ VD+W+ G ++ ++
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLA 202
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 14/203 (6%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIK--KMKKKYYSWEECVNLREVKSLRKM- 57
+E + L++ +G+G +G V A+++ + E VA+K MK+ E N+++ + KM
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICINKML 61
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFS--EAEVRNWCFQVFQGLAY 115
+H N+VK RE +I Y EY C+ +L E E + + + Q+ G+ Y
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 116 MHQRGYFHRDLKPENLLVS-KDTIKIADFGLA---REINSRPPFTEYVSTRWYRAPEVLL 171
+H G HRD+KPENLL+ +D +KI+DFGLA R N + T Y APE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 172 QSYLYSSKVDMWAMGAIMAELIT 194
+ ++ VD+W+ G ++ ++
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLA 202
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 125/284 (44%), Gaps = 35/284 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E + + + +G G FG+V+ A +QS ++A+K + K + E REV+ +
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
HPNI++L + +Y + EY + F E + ++ L+Y H
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 119 RGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
+ HRD+KPENLL+ S +KIADFG + S T T Y PE +++ ++
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPS-SRRTTLCGTLDYLPPE-MIEGRMHD 188
Query: 178 SKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKF 237
KVD+W++G + E + P F + + +I V + F
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV-------------------EFTF 229
Query: 238 PQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
P V + A LI+ L + S+R T AE L+HP
Sbjct: 230 PDFV-----------TEGARDLISRLLKHNASQRLTLAEVLEHP 262
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 11/211 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSH 59
E +K K +G+G+F +V A + AIK ++K++ E V RE + ++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREK--CFSEAEVRNWCFQVFQGLAYMH 117
P VKL ++++ LYF Y + +L+K K F E R + ++ L Y+H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLAREI---NSRPPFTEYVSTRWYRAPEVLLQS 173
+G HRDLKPEN+L+++D I+I DFG A+ + + + +V T Y +PE+L +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSE 204
S D+WA+G I+ +L+ P F +E
Sbjct: 210 SACKSS-DLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 11/211 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSH 59
E +K K +G+G+F +V A + AIK ++K++ E V RE + ++ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREK--CFSEAEVRNWCFQVFQGLAYMH 117
P VKL ++++ LYF Y + +L+K K F E R + ++ L Y+H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLAREI---NSRPPFTEYVSTRWYRAPEVLLQS 173
+G HRDLKPEN+L+++D I+I DFG A+ + + + +V T Y +PE+L +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSE 204
S D+WA+G I+ +L+ P F +E
Sbjct: 208 SACKSS-DLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 14/203 (6%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIK--KMKKKYYSWEECVNLREVKSLRKM- 57
+E + L++ +G+G +G V A+++ + E VA+K MK+ E N+++ + KM
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICINKML 61
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFS--EAEVRNWCFQVFQGLAY 115
+H N+VK RE +I Y EY C+ +L E E + + + Q+ G+ Y
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 116 MHQRGYFHRDLKPENLLVS-KDTIKIADFGLA---REINSRPPFTEYVSTRWYRAPEVLL 171
+H G HRD+KPENLL+ +D +KI+DFGLA R N + T Y APE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 172 QSYLYSSKVDMWAMGAIMAELIT 194
+ ++ VD+W+ G ++ ++
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLA 202
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 11/211 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSH 59
E +K K +G+G+F +V A + AIK ++K++ E V RE + ++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREK--CFSEAEVRNWCFQVFQGLAYMH 117
P VKL ++++ LYF Y + +L+K K F E R + ++ L Y+H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLAREI---NSRPPFTEYVSTRWYRAPEVLLQS 173
+G HRDLKPEN+L+++D I+I DFG A+ + + + +V T Y +PE+L +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSE 204
S D+WA+G I+ +L+ P F +E
Sbjct: 210 SACKSS-DLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 11/211 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSH 59
E +K K +G+G+F +V A + AIK ++K++ E V RE + ++ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREK--CFSEAEVRNWCFQVFQGLAYMH 117
P VKL ++++ LYF Y + +L+K K F E R + ++ L Y+H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLAREI---NSRPPFTEYVSTRWYRAPEVLLQS 173
+G HRDLKPEN+L+++D I+I DFG A+ + + + +V T Y +PE+L +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEK 207
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSE 204
S D+WA+G I+ +L+ P F +E
Sbjct: 208 SACKSS-DLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 12/200 (6%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEV-VAIKKMKKKYYSWEECVNLREVKSLRKMSHP 60
E L+KE+G G FG V + K G+ VA+K +K+ S +E +E +++ K+SHP
Sbjct: 8 EEITLLKELGSGQFGVV--KLGKWKGQYDVAVKMIKEGSMSEDEF--FQEAQTMMKLSHP 63
Query: 61 NIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+VK V + +Y V EY+ L ++ K +++ C+ V +G+A++
Sbjct: 64 KLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH 123
Query: 120 GYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQSYL 175
+ HRDL N LV +D +K++DFG+ R + + V T++ + APEV +
Sbjct: 124 QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD-DQYVSSVGTKFPVKWSAPEV-FHYFK 181
Query: 176 YSSKVDMWAMGAIMAELITL 195
YSSK D+WA G +M E+ +L
Sbjct: 182 YSSKSDVWAFGILMWEVFSL 201
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 11/211 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSH 59
E +K K +G+G+F +V A + AIK ++K++ E V RE + ++ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREK--CFSEAEVRNWCFQVFQGLAYMH 117
P VKL ++++ LYF Y + +L+K K F E R + ++ L Y+H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLAREI---NSRPPFTEYVSTRWYRAPEVLLQS 173
+G HRDLKPEN+L+++D I+I DFG A+ + + + +V T Y +PE+L +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSE 204
S D+WA+G I+ +L+ P F +E
Sbjct: 208 SACKSS-DLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 11/211 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSH 59
E +K K +G+G+F +V A + AIK ++K++ E V RE + ++ H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREK--CFSEAEVRNWCFQVFQGLAYMH 117
P VKL ++++ LYF Y + +L+K K F E R + ++ L Y+H
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 150
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLAREI---NSRPPFTEYVSTRWYRAPEVLLQS 173
+G HRDLKPEN+L+++D I+I DFG A+ + + + +V T Y +PE+L +
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 210
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSE 204
S D+WA+G I+ +L+ P F +E
Sbjct: 211 SACKSS-DLWALGCIIYQLVAGLPPFRAGNE 240
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 14/203 (6%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIK--KMKKKYYSWEECVNLREVKSLRKM- 57
+E + L++ +G+G +G V A+++ + E VA+K MK+ E N+++ + KM
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICINKML 61
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFS--EAEVRNWCFQVFQGLAY 115
+H N+VK RE +I Y EY C+ +L E E + + + Q+ G+ Y
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 116 MHQRGYFHRDLKPENLLVS-KDTIKIADFGLA---REINSRPPFTEYVSTRWYRAPEVLL 171
+H G HRD+KPENLL+ +D +KI+DFGLA R N + T Y APE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 172 QSYLYSSKVDMWAMGAIMAELIT 194
+ ++ VD+W+ G ++ ++
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLA 202
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 109/205 (53%), Gaps = 12/205 (5%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V ++G A+K + K K E +N E + L+
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
++ P +VKL+ ++N LY V EYM +++ ++ R FSE R + Q+ Y
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR-RIGRFSEPHARFYAAQIVLTFEY 156
Query: 116 MHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSY 174
+H +RDLKPENLL+ + IK+ADFG A+ + R T Y APE++L S
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SK 213
Query: 175 LYSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 11/211 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSH 59
E +K K +G+G+F +V A + AIK ++K++ E V RE + ++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREK--CFSEAEVRNWCFQVFQGLAYMH 117
P VKL ++++ LYF Y + +L+K K F E R + ++ L Y+H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLAREI---NSRPPFTEYVSTRWYRAPEVLLQS 173
+G HRDLKPEN+L+++D I+I DFG A+ + + + +V T Y +PE+L +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSE 204
S D+WA+G I+ +L+ P F +E
Sbjct: 210 SACKSS-DLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 11/211 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSH 59
E +K K +G+G+F +V A + AIK ++K++ E V RE + ++ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREK--CFSEAEVRNWCFQVFQGLAYMH 117
P VKL ++++ LYF Y + +L+K K F E R + ++ L Y+H
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 146
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLAREI---NSRPPFTEYVSTRWYRAPEVLLQS 173
+G HRDLKPEN+L+++D I+I DFG A+ + + + +V T Y +PE+L +
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 206
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSE 204
S D+WA+G I+ +L+ P F +E
Sbjct: 207 SACKSS-DLWALGCIIYQLVAGLPPFRAGNE 236
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 109/205 (53%), Gaps = 12/205 (5%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V ++G A+K + K K E +N E + L+
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
++ P +VKL+ ++N LY V EYM +++ ++ R FSE R + Q+ Y
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR-RIGRFSEPHARFYAAQIVLTFEY 156
Query: 116 MHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSY 174
+H +RDLKPENLL+ + IK+ADFG A+ + R T Y APE++L S
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SK 213
Query: 175 LYSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 11/211 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSH 59
E +K K +G+G+F +V A + AIK ++K++ E V RE + ++ H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREK--CFSEAEVRNWCFQVFQGLAYMH 117
P VKL ++++ LYF Y + +L+K K F E R + ++ L Y+H
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 131
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLAREI---NSRPPFTEYVSTRWYRAPEVLLQS 173
+G HRDLKPEN+L+++D I+I DFG A+ + + + +V T Y +PE+L +
Sbjct: 132 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 191
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSE 204
S D+WA+G I+ +L+ P F +E
Sbjct: 192 SACKSS-DLWALGCIIYQLVAGLPPFRAGNE 221
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 106/197 (53%), Gaps = 19/197 (9%)
Query: 8 KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKM-SHPNIVKLK 66
K +G+G+F + + K+S + A+K + K+ E +E+ +L+ HPNIVKL
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRM----EANTQKEITALKLCEGHPNIVKLH 72
Query: 67 EVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRD 125
EV + + V E + L++ +K ++K FSE E ++ +++MH G HRD
Sbjct: 73 EVFHDQLHTFLVMELLNGGELFERIK-KKKHFSETEASYIMRKLVSAVSHMHDVGVVHRD 131
Query: 126 LKPENLLVSKDT----IKIADFGLAREINSRPPFTEYVSTRW----YRAPEVLLQSYLYS 177
LKPENLL + + IKI DFG AR +PP + + T Y APE+L Q+ Y
Sbjct: 132 LKPENLLFTDENDNLEIKIIDFGFAR---LKPPDNQPLKTPCFTLHYAAPELLNQNG-YD 187
Query: 178 SKVDMWAMGAIMAELIT 194
D+W++G I+ +++
Sbjct: 188 ESCDLWSLGVILYTMLS 204
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 11/211 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSH 59
E +K K +G+G+F +V A + AIK ++K++ E V RE + ++ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREK--CFSEAEVRNWCFQVFQGLAYMH 117
P VKL ++++ LYF Y + +L+K K F E R + ++ L Y+H
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 146
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLAREI---NSRPPFTEYVSTRWYRAPEVLLQS 173
+G HRDLKPEN+L+++D I+I DFG A+ + + + +V T Y +PE+L +
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 206
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSE 204
S D+WA+G I+ +L+ P F +E
Sbjct: 207 SACKSS-DLWALGCIIYQLVAGLPPFRAGNE 236
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 117/222 (52%), Gaps = 8/222 (3%)
Query: 4 YKLIKEVGDGTFGSVW--RAISK-QSGEVVAIKKMKKKYYSWEECVNLR-EVKSLRKMSH 59
++L+K +G G+FG V+ R +++ SG + A+K +KK + V + E L ++H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
P +VKL + LY + +++ +E F+E +V+ + ++ GL ++H
Sbjct: 90 PFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSL 149
Query: 120 GYFHRDLKPENLLVSKDT-IKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
G +RDLKPEN+L+ ++ IK+ DFGL++E I+ + T Y APEV+ + +S
Sbjct: 150 GIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQG-HS 208
Query: 178 SKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSV-IGTP 218
D W+ G +M E++T F G + + I +G P
Sbjct: 209 HSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMP 250
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 11/211 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSH 59
E +K K +G+G+F +V A + AIK ++K++ E V RE + ++ H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREK--CFSEAEVRNWCFQVFQGLAYMH 117
P VKL ++++ LYF Y + +L+K K F E R + ++ L Y+H
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 154
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLAREI---NSRPPFTEYVSTRWYRAPEVLLQS 173
+G HRDLKPEN+L+++D I+I DFG A+ + + + +V T Y +PE+L +
Sbjct: 155 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 214
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSE 204
S D+WA+G I+ +L+ P F +E
Sbjct: 215 SACKSS-DLWALGCIIYQLVAGLPPFRAGNE 244
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 112/217 (51%), Gaps = 13/217 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E +LIK +G+G FG VW + VAIK +K S E L E + ++K+ H
Sbjct: 9 ESLQLIKRLGNGQFGEVWMG-TWNGNTKVAIKTLKPGTMSPESF--LEEAQIMKKLKHDK 65
Query: 62 IVKLKEVIRENDILYFVFEYM-ECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ E I Y V EYM + +L +KD E + + + QV G+AY+ +
Sbjct: 66 LVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM 124
Query: 120 GYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVS---TRWYRAPEVLLQSYL 175
Y HRDL+ N+LV I KIADFGLAR I + +W APE L
Sbjct: 125 NYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKW-TAPEAALYGR- 182
Query: 176 YSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
++ K D+W+ G ++ EL+T R +PG + + + ++
Sbjct: 183 FTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQV 219
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 125/284 (44%), Gaps = 35/284 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY--SWEECVNLREVKSLRKMS 58
+E + + + +G G FG+V+ A +QS ++A+K + K + E REV+ +
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
HPNI++L + +Y + EY + F E + ++ L+Y H
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 119 RGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
+ HRD+KPENLL+ S +KIADFG + S T T Y PE +++ ++
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT-LCGTLDYLPPE-MIEGRMHD 188
Query: 178 SKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKF 237
KVD+W++G + E + P F + + +I V + F
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV-------------------EFTF 229
Query: 238 PQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
P V + A LI+ L + S+R T AE L+HP
Sbjct: 230 PDFV-----------TEGARDLISRLLKHNASQRLTLAEVLEHP 262
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 11/211 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSH 59
E +K K +G+G+F +V A + AIK ++K++ E V RE + ++ H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREK--CFSEAEVRNWCFQVFQGLAYMH 117
P VKL ++++ LYF Y + +L+K K F E R + ++ L Y+H
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 124
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLAREI---NSRPPFTEYVSTRWYRAPEVLLQS 173
+G HRDLKPEN+L+++D I+I DFG A+ + + + +V T Y +PE+L +
Sbjct: 125 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 184
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSE 204
S D+WA+G I+ +L+ P F +E
Sbjct: 185 SACKSS-DLWALGCIIYQLVAGLPPFRAGNE 214
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 115/219 (52%), Gaps = 12/219 (5%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS-- 58
+E ++L K +G G+FG V+ A K++ + AIK +KK ++ V V+ R +S
Sbjct: 17 IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEK-RVLSLA 75
Query: 59 --HPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKC--FSEAEVRNWCFQVFQGLA 114
HP + + + + L+FV EY+ N LM + C F + + ++ GL
Sbjct: 76 WEHPFLTHMFCTFQTKENLFFVMEYL--NGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 133
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQ 172
++H +G +RDLK +N+L+ KD IKIADFG+ +E + E+ T Y APE+LL
Sbjct: 134 FLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLG 193
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKI 211
Y+ VD W+ G ++ E++ + F G E + + I
Sbjct: 194 QK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 231
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 11/211 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSH 59
E +K K +G+G+F +V A + AIK ++K++ E V RE + ++ H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREK--CFSEAEVRNWCFQVFQGLAYMH 117
P VKL ++++ LYF Y + +L+K K F E R + ++ L Y+H
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 125
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLAREI---NSRPPFTEYVSTRWYRAPEVLLQS 173
+G HRDLKPEN+L+++D I+I DFG A+ + + + +V T Y +PE+L +
Sbjct: 126 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 185
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSE 204
S D+WA+G I+ +L+ P F +E
Sbjct: 186 SACKSS-DLWALGCIIYQLVAGLPPFRAGNE 215
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 11/211 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSH 59
E +K K +G+G+F +V A + AIK ++K++ E V RE + ++ H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREK--CFSEAEVRNWCFQVFQGLAYMH 117
P VKL ++++ LYF Y + +L+K K F E R + ++ L Y+H
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 127
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLAREI---NSRPPFTEYVSTRWYRAPEVLLQS 173
+G HRDLKPEN+L+++D I+I DFG A+ + + + +V T Y +PE+L +
Sbjct: 128 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 187
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSE 204
S D+WA+G I+ +L+ P F +E
Sbjct: 188 SACKSS-DLWALGCIIYQLVAGLPPFRAGNE 217
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 11/211 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSH 59
E +K K +G+G+F +V A + AIK ++K++ E V RE + ++ H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREK--CFSEAEVRNWCFQVFQGLAYMH 117
P VKL ++++ LYF Y + +L+K K F E R + ++ L Y+H
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 126
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLAREI---NSRPPFTEYVSTRWYRAPEVLLQS 173
+G HRDLKPEN+L+++D I+I DFG A+ + + + +V T Y +PE+L +
Sbjct: 127 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 186
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSE 204
S D+WA+G I+ +L+ P F +E
Sbjct: 187 SACKSS-DLWALGCIIYQLVAGLPPFRAGNE 216
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 108/203 (53%), Gaps = 14/203 (6%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIK--KMKKKYYSWEECVNLREVKSLRKM- 57
+E + L++ +G+G G V A+++ + E VA+K MK+ E N+++ + KM
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICINKML 61
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFS--EAEVRNWCFQVFQGLAY 115
+H N+VK RE +I Y EY C+ +L E E + + + Q+ G+ Y
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 116 MHQRGYFHRDLKPENLLVS-KDTIKIADFGLA---REINSRPPFTEYVSTRWYRAPEVLL 171
+H G HRD+KPENLL+ +D +KI+DFGLA R N + T Y APE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 172 QSYLYSSKVDMWAMGAIMAELIT 194
+ ++ VD+W+ G ++ ++
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLA 202
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 114/227 (50%), Gaps = 21/227 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN---LREVKSLRKMS 58
E Y+++ +G G++G + K G+++ K++ Y S E + EV LR++
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELD--YGSMTEAEKQMLVSEVNLLRELK 63
Query: 59 HPNIVKLKEVI--RENDILYFVFEYMECN-----LYQLMKDREKCFSEAEVRNWCFQVFQ 111
HPNIV+ + I R N LY V EY E + + K+R+ E +R Q+
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT-QLTL 122
Query: 112 GLAYMHQRG-----YFHRDLKPENL-LVSKDTIKIADFGLAREINSRPPFT-EYVSTRWY 164
L H+R HRDLKP N+ L K +K+ DFGLAR +N F E+V T +Y
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYY 182
Query: 165 RAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKI 211
+PE + Y+ K D+W++G ++ EL L P F S+ + KI
Sbjct: 183 MSPEQ-MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 110/211 (52%), Gaps = 11/211 (5%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSH 59
E +K K +G+G+F + A + AIK ++K++ E V RE + ++ H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREK--CFSEAEVRNWCFQVFQGLAYMH 117
P VKL ++++ LYF Y + +L+K K F E R + ++ L Y+H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLAREI---NSRPPFTEYVSTRWYRAPEVLLQS 173
+G HRDLKPEN+L+++D I+I DFG A+ + + + +V T Y +PE+L +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSE 204
S D+WA+G I+ +L+ P F +E
Sbjct: 208 SACKSS-DLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 108/203 (53%), Gaps = 14/203 (6%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIK--KMKKKYYSWEECVNLREVKSLRKM- 57
+E + L++ +G+G +G V A+++ + E VA+K MK+ E N+++ + M
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE---NIKKEICINAML 62
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFS--EAEVRNWCFQVFQGLAY 115
+H N+VK RE +I Y EY C+ +L E E + + + Q+ G+ Y
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 116 MHQRGYFHRDLKPENLLVS-KDTIKIADFGLA---REINSRPPFTEYVSTRWYRAPEVLL 171
+H G HRD+KPENLL+ +D +KI+DFGLA R N + T Y APE+L
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 172 QSYLYSSKVDMWAMGAIMAELIT 194
+ ++ VD+W+ G ++ ++
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLA 203
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 112/221 (50%), Gaps = 34/221 (15%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEE---------------- 44
+ +Y L E+G G++G V A ++ A+K + KK +
Sbjct: 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPG 71
Query: 45 -CVNLR--------EVKSLRKMSHPNIVKLKEVIRE--NDILYFVFEYMECNLYQLMK-D 92
C+ R E+ L+K+ HPN+VKL EV+ + D LY VFE + N +M+
Sbjct: 72 GCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELV--NQGPVMEVP 129
Query: 93 REKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREI-N 150
K SE + R + + +G+ Y+H + HRD+KP NLLV +D IKIADFG++ E
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG 189
Query: 151 SRPPFTEYVSTRWYRAPEVLLQSY-LYSSK-VDMWAMGAIM 189
S + V T + APE L ++ ++S K +D+WAMG +
Sbjct: 190 SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 134/278 (48%), Gaps = 45/278 (16%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVI 69
VG G FG V +A K + VAIK+++ + E + E++ L +++HPNIVKL
Sbjct: 17 VGRGAFGVVCKA--KWRAKDVAIKQIESES---ERKAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 70 RENDILYFVFEYMEC-NLYQLMKDREKC--FSEAEVRNWCFQVFQGLAYMHQ---RGYFH 123
+ + V EY E +LY ++ E ++ A +WC Q QG+AY+H + H
Sbjct: 72 L--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 129
Query: 124 RDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVD 181
RDLKP NLL+ +KI DFG A +I + T + + APEV S YS K D
Sbjct: 130 RDLKPPNLLLVAGGTVLKICDFGTACDIQTH--MTNNKGSAAWMAPEVFEGSN-YSEKCD 186
Query: 182 MWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFPQLV 241
+++ G I+ E+IT R F DE IG P A ++ A + P +
Sbjct: 187 VFSWGIILWEVITRRKPF------DE-------IGGP-----AFRIMWAVHNGTRPPLIK 228
Query: 242 GVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
+P K SL+ S DPS+RP+ E ++
Sbjct: 229 NLP---------KPIESLMTRCWSKDPSQRPSMEEIVK 257
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 134/278 (48%), Gaps = 45/278 (16%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVI 69
VG G FG V +A K + VAIK+++ + E + E++ L +++HPNIVKL
Sbjct: 16 VGRGAFGVVCKA--KWRAKDVAIKQIESES---ERKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 70 RENDILYFVFEYMEC-NLYQLMKDREKC--FSEAEVRNWCFQVFQGLAYMHQ---RGYFH 123
+ + V EY E +LY ++ E ++ A +WC Q QG+AY+H + H
Sbjct: 71 L--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128
Query: 124 RDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVD 181
RDLKP NLL+ +KI DFG A +I + T + + APEV S YS K D
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFGTACDIQTH--MTNNKGSAAWMAPEVFEGSN-YSEKCD 185
Query: 182 MWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFPQLV 241
+++ G I+ E+IT R F DE IG P A ++ A + P +
Sbjct: 186 VFSWGIILWEVITRRKPF------DE-------IGGP-----AFRIMWAVHNGTRPPLIK 227
Query: 242 GVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
+P K SL+ S DPS+RP+ E ++
Sbjct: 228 NLP---------KPIESLMTRCWSKDPSQRPSMEEIVK 256
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 104/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V ++G A+K + K K E +N E + L+
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + IK+ADFG A+ + R T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 103/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
++++ IK +G G+FG V K+SG A+K + K K E +N E + L+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLAGTPEYLAPEIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 103/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
++++ IK +G G+FG V K+SG A+K + K K E +N E + L+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 103/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
++++ IK +G G+FG V K+SG A+K + K K E +N E + L+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLXGTPEYLAPEIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 103/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
++++ IK +G G+FG V K+SG A+K + K K E +N E + L+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 130/288 (45%), Gaps = 36/288 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHP 60
+ Y++ +++G G++ R I K + A+K + K E + + LR HP
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEIL----LRYGQHP 76
Query: 61 NIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
NI+ LK+V + +Y V E + R+K FSE E F + + + Y+H +G
Sbjct: 77 NIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG 136
Query: 121 YFHRDLKPENLLV-----SKDTIKIADFGLAREINSRPPFTEY-VSTRWYRAPEVLLQSY 174
HRDLKP N+L + ++I+I DFG A+++ + T + APEV L+
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEV-LERQ 195
Query: 175 LYSSKVDMWAMGAIMAELIT-LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
Y + D+W++G ++ +T P G + TP + +LAR
Sbjct: 196 GYDAACDIWSLGVLLYTXLTGYTPFANGPDD------------TPEE-------ILARIG 236
Query: 234 NYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
+ KF G S + A L++ DP +R TAA L+HP
Sbjct: 237 SGKFSLSGG-----YWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHP 279
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 103/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
++++ IK +G G+FG V K+SG A+K + K K E +N E + L+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 121/281 (43%), Gaps = 35/281 (12%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSHPN 61
Y L +G GTFG V + +G VA+K + ++ + V RE+++L+ HP+
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPH 77
Query: 62 IVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
I+KL +VI ++ V EY+ L+ + + E E R Q+ G+ Y H+
Sbjct: 78 IIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR-LDEKESRRLFQQILSGVDYCHRHM 136
Query: 121 YFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSK 179
HRDLKPEN+L+ KIADFGL+ ++ + Y APEV+ +
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPE 196
Query: 180 VDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFPQ 239
VD+W+ G I+ L+ F KIC DG+ PQ
Sbjct: 197 VDIWSSGVILYALLCGTLPFDDDHVPTLFKKIC------------DGIFYT-------PQ 237
Query: 240 LVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQH 280
+ N +SL+ + DP KR T + +H
Sbjct: 238 YL-----------NPSVISLLKHMLQVDPMKRATIKDIREH 267
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 114/227 (50%), Gaps = 21/227 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN---LREVKSLRKMS 58
E Y+++ +G G++G + K G+++ K++ Y S E + EV LR++
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELD--YGSMTEAEKQMLVSEVNLLRELK 63
Query: 59 HPNIVKLKEVI--RENDILYFVFEYMECN-----LYQLMKDREKCFSEAEVRNWCFQVFQ 111
HPNIV+ + I R N LY V EY E + + K+R+ E +R Q+
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT-QLTL 122
Query: 112 GLAYMHQRG-----YFHRDLKPENL-LVSKDTIKIADFGLAREINSRPPFTE-YVSTRWY 164
L H+R HRDLKP N+ L K +K+ DFGLAR +N F + +V T +Y
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYY 182
Query: 165 RAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKI 211
+PE + Y+ K D+W++G ++ EL L P F S+ + KI
Sbjct: 183 MSPEQ-MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 103/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
++++ IK +G G+FG V K+SG A+K + K K E +N E + L+
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 98
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 215
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V K++G A+K + K K E +N E + L+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 114/227 (50%), Gaps = 21/227 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN---LREVKSLRKMS 58
E Y+++ +G G++G + K G+++ K++ Y S E + EV LR++
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELD--YGSMTEAEKQMLVSEVNLLRELK 63
Query: 59 HPNIVKLKEVI--RENDILYFVFEYMECN-----LYQLMKDREKCFSEAEVRNWCFQVFQ 111
HPNIV+ + I R N LY V EY E + + K+R+ E +R Q+
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT-QLTL 122
Query: 112 GLAYMHQRG-----YFHRDLKPENL-LVSKDTIKIADFGLAREINSRPPFTE-YVSTRWY 164
L H+R HRDLKP N+ L K +K+ DFGLAR +N F + +V T +Y
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYY 182
Query: 165 RAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKI 211
+PE + Y+ K D+W++G ++ EL L P F S+ + KI
Sbjct: 183 MSPEQ-MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V K++G A+K + K K E +N E + L+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V K++G A+K + K K E +N E + L+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V K++G A+K + K K E +N E + L+
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 118
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 178
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 235
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 103/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
++++ IK +G G+FG V K+SG A+K + K K E +N E + L+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 103/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
++++ IK +G G+FG V K+SG A+K + K K E +N E + L+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 33/283 (11%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E + ++ +G G+FG V++ I ++ +VVAIK + + E +E+ L +
Sbjct: 23 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 62 IVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGY 121
+ K + L+ + EY+ L R F E ++ ++ +GL Y+H
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGG-SALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKK 141
Query: 122 FHRDLKPENLLVS-KDTIKIADFGLAREI-NSRPPFTEYVSTRWYRAPEVLLQSYLYSSK 179
HRD+K N+L+S + +K+ADFG+A ++ +++ +V T ++ APEV+ QS Y SK
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQS-AYDSK 200
Query: 180 VDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFPQ 239
D+W++G EL P P D +L N P
Sbjct: 201 ADIWSLGITAIELAKGEP--------------------PNSDMHPMRVLFLIPKNNP-PT 239
Query: 240 LVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
LVG K I + + DPS RPTA E L+H F
Sbjct: 240 LVG--------DFTKSFKEFIDACLNKDPSFRPTAKELLKHKF 274
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHP 60
++ Y+L + +G G F V A +GE+VAIK M K + E+++L+ + H
Sbjct: 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQ 68
Query: 61 NIVKLKEVIRENDILYFVFEYM---ECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+I +L V+ + ++ V EY E Y + +DR SE E R Q+ +AY+H
Sbjct: 69 HICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR---LSEEETRVVFRQIVSAVAYVH 125
Query: 118 QRGYFHRDLKPENLLVSK-DTIKIADFGLAREINSRPPF--TEYVSTRWYRAPEVLLQSY 174
+GY HRDLKPENLL + +K+ DFGL + + + Y APE++
Sbjct: 126 SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKS 185
Query: 175 LYSSKVDMWAMGAIMAELI 193
S+ D+W+MG ++ L+
Sbjct: 186 YLGSEADVWSMGILLYVLM 204
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V K++G A+K + K K E +N E + L+
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 90
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 150
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 151 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 207
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 103/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
++++ IK +G G+FG V K+SG A+K + K K E +N E + L+
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 84
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 85 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 144
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 145 HSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 201
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 202 YNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V K++G A+K + K K E +N E + L+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 98
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 215
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V K++G A+K + K K E +N E + L+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 98
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 215
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 132/299 (44%), Gaps = 41/299 (13%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKK--MKKKYYSWEECVNLREVKSLRKMSH 59
+ Y+L + +G G V A E VAIK+ ++K S +E L+E++++ + H
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDEL--LKEIQAMSQCHH 67
Query: 60 PNIVKLKEVIRENDILYFVFEYMEC-NLYQLMKD-------REKCFSEAEVRNWCFQVFQ 111
PNIV D L+ V + + ++ ++K + E+ + +V +
Sbjct: 68 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 127
Query: 112 GLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTE------YVSTRWY 164
GL Y+H+ G HRD+K N+L+ +D +++IADFG++ + + T +V T +
Sbjct: 128 GLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 187
Query: 165 RAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWA 224
APEV+ Q Y K D+W+ G EL T G +
Sbjct: 188 MAPEVMEQVRGYDFKADIWSFGITAIELAT---------------------GAAPYHKYP 226
Query: 225 DGLLLARAINYKFPQL-VGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+L + P L GV ++ K +I+ DP KRPTAAE L+H F
Sbjct: 227 PMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKF 285
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V K++G A+K + K K E +N E + L+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 98
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 215
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ I+ +G G+FG V K++G A+K + K K E +N + ++ +
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQ--QA 98
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY R FSE R + Q+ Y+
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + IK+ADFG A+ + R T Y APE++L S
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 215
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 132/299 (44%), Gaps = 41/299 (13%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKK--MKKKYYSWEECVNLREVKSLRKMSH 59
+ Y+L + +G G V A E VAIK+ ++K S +E L+E++++ + H
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDEL--LKEIQAMSQCHH 72
Query: 60 PNIVKLKEVIRENDILYFVFEYMEC-NLYQLMKD-------REKCFSEAEVRNWCFQVFQ 111
PNIV D L+ V + + ++ ++K + E+ + +V +
Sbjct: 73 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 112 GLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTE------YVSTRWY 164
GL Y+H+ G HRD+K N+L+ +D +++IADFG++ + + T +V T +
Sbjct: 133 GLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 192
Query: 165 RAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWA 224
APEV+ Q Y K D+W+ G EL T G +
Sbjct: 193 MAPEVMEQVRGYDFKADIWSFGITAIELAT---------------------GAAPYHKYP 231
Query: 225 DGLLLARAINYKFPQL-VGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+L + P L GV ++ K +I+ DP KRPTAAE L+H F
Sbjct: 232 PMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKF 290
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V K++G A+K + K K E +N E + L+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 98
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY R FSE R + Q+ Y+
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENL++ + IK+ DFG A+ + R T Y APE++L S
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 215
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 114/216 (52%), Gaps = 20/216 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E KL+K +G G FG VW S +V A+K +K S + L E ++ + H
Sbjct: 13 ESIKLVKRLGAGQFGEVWMGYYNNSTKV-AVKTLKPGTMSVQ--AFLEEANLMKTLQHDK 69
Query: 62 IVKLKEVIRENDILYFVFEYM-ECNLYQLMKDREKC-FSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ + +Y + EYM + +L +K E ++ ++ Q+ +G+AY+ ++
Sbjct: 70 LVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 129
Query: 120 GYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVS-------TRWYRAPEVLL 171
Y HRDL+ N+LVS+ + KIADFGLAR I EY + +W APE +
Sbjct: 130 NYIHRDLRAANVLVSESLMCKIADFGLARVIED----NEYTAREGAKFPIKW-TAPEA-I 183
Query: 172 QSYLYSSKVDMWAMGAIMAELITLRPL-FPGTSEAD 206
++ K D+W+ G ++ E++T + +PG + AD
Sbjct: 184 NFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNAD 219
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 141/322 (43%), Gaps = 45/322 (13%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
ERY+++ +G+GTFG V + + + G K+ K ++E L E+ L K++ +
Sbjct: 33 ERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARL-EINVLEKINEKD 91
Query: 62 ------IVKLKEVIRENDILYFVFEYMECNLYQLMKDREKC-FSEAEVRNWCFQVFQGLA 114
V++ + + + FE + + + +KD + +VR+ FQ+ Q +
Sbjct: 92 PDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVK 151
Query: 115 YMHQRGYFHRDLKPENLL--------------------VSKDTIKIADFGLAREINSRPP 154
++H H DLKPEN+L V +++ DFG A
Sbjct: 152 FLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSA--TFDHEH 209
Query: 155 FTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSV 214
+ VSTR YRAPEV+L+ +S D+W++G I+ E LF + + + +
Sbjct: 210 HSTIVSTRHYRAPEVILE-LGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERI 268
Query: 215 IG---------TPTQDSWADGLL--LARAINYKFPQLVGVPLSVLMPSANKDA---VSLI 260
+G T Q + G L ++ + PL + S ++ LI
Sbjct: 269 LGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHHQLFDLI 328
Query: 261 ASLCSWDPSKRPTAAEALQHPF 282
S+ ++P+KR T EALQHPF
Sbjct: 329 ESMLEYEPAKRLTLGEALQHPF 350
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 128/291 (43%), Gaps = 43/291 (14%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKY-------YSWEECVNLREVKSLRK 56
Y + +E+G G F V + K +G A K +KK+ EE REV LR+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIE--REVSILRQ 71
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
+ HPNI+ L +V + + E + L+ + +E SE E ++ Q+ G+ Y
Sbjct: 72 VLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNY 130
Query: 116 MHQRGYFHRDLKPEN-LLVSKDT----IKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+H + H DLKPEN +L+ K+ IK+ DFGLA EI F T + APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
L + DMW++G I L++ F G ++ + + I
Sbjct: 191 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANIT------------------ 231
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
A++Y F + S L A I L + KR T EAL+HP
Sbjct: 232 -AVSYDFDEEFFSQTSEL-------AKDFIRKLLVKETRKRLTIQEALRHP 274
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
++++ IK +G G+FG V K+SG A+K + K K E +N E + L+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R F+E R + Q+ Y+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 6/202 (2%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKM-KKKYYSWEECVN-LREVKSLRKMS 58
+++++ IK +G G+FG V ++G A+K + K+K +E + L E + L+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
P +VKL+ ++N LY V EY R FSE R + Q+ Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 RGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
+RDLKPENL++ + IK+ DFGLA+ + R T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 SKVDMWAMGAIMAELITLRPLF 199
VD WA+G ++ E+ P F
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
++++ IK +G G+FG V K+SG A+K + K K E +N E + L+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ ++ P F
Sbjct: 215 YNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
++++ IK +G G+FG V K+SG A+K + K K E +N E + L+
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 118
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R F E R + Q+ Y+
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 178
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 235
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 116/225 (51%), Gaps = 15/225 (6%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK----KKYYSWEECVNLREVKSLRK 56
+ +++ K++G G F V+RA G VA+KK++ + +C+ +E+ L++
Sbjct: 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCI--KEIDLLKQ 88
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECN----LYQLMKDREKCFSEAEVRNWCFQVFQG 112
++HPN++K E++ L V E + + + K +++ E V + Q+
Sbjct: 89 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148
Query: 113 LAYMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTE-YVSTRWYRAPEVL 170
L +MH R HRD+KP N+ ++ +K+ D GL R +S+ V T +Y +PE +
Sbjct: 149 LEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERI 208
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 215
++ Y+ K D+W++G ++ E+ L+ F G + +Y +C I
Sbjct: 209 HENG-YNFKSDIWSLGCLLYEMAALQSPFYG--DKMNLYSLCKKI 250
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 113/219 (51%), Gaps = 12/219 (5%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS-- 58
+E + L K +G G+FG V+ A K++ + AIK +KK ++ V V+ R +S
Sbjct: 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEK-RVLSLA 74
Query: 59 --HPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKC--FSEAEVRNWCFQVFQGLA 114
HP + + + + L+FV EY+ N LM + C F + + ++ GL
Sbjct: 75 WEHPFLTHMFCTFQTKENLFFVMEYL--NGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 132
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQ 172
++H +G +RDLK +N+L+ KD IKIADFG+ +E + + T Y APE+LL
Sbjct: 133 FLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLG 192
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKI 211
Y+ VD W+ G ++ E++ + F G E + + I
Sbjct: 193 QK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 230
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
++++ IK +G G+FG V K+SG A+K + K K E +N E + L+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENL++ + I++ DFG A+ + R T Y APE+++ S
Sbjct: 158 HSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIII-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 124/288 (43%), Gaps = 39/288 (13%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
M+RY + +G G F + + EV A K + K K + E+ E+ +
Sbjct: 25 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST--EIAIHKS 82
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
+ +P++V ++D +Y V E + R K +E E R + Q QG+ Y+
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 142
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSY 174
H HRDLK NL ++ D +KI DFGLA +I + T Y APEVL +
Sbjct: 143 HNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKG 202
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
+S +VD+W++G I+ L+ +P F TS E Y + +
Sbjct: 203 -HSFEVDIWSLGCILYTLLVGKPPF-ETSCLKETY------------------IRIKKNE 242
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
Y P+ + N A +LI + DP+ RP+ AE L F
Sbjct: 243 YSVPRHI-----------NPVASALIRRMLHADPTLRPSVAELLTDEF 279
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 114/218 (52%), Gaps = 21/218 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E KL K++G G FG VW A + +V A+K MK S E L E ++ + H
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKV-AVKTMKPGSMSVEAF--LAEANVMKTLQHDK 71
Query: 62 IVKLKEVIRENDILYFVFEYM-ECNLYQLMKDREKCFSE-AEVRNWCFQVFQGLAYMHQR 119
+VKL V+ + I Y + E+M + +L +K E ++ ++ Q+ +G+A++ QR
Sbjct: 72 LVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 130
Query: 120 GYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVS-------TRWYRAPEVLL 171
Y HRDL+ N+LVS + KIADFGLAR I EY + +W APE +
Sbjct: 131 NYIHRDLRAANILVSASLVCKIADFGLARVIED----NEYTAREGAKFPIKW-TAPEA-I 184
Query: 172 QSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEI 208
++ K D+W+ G ++ E++T R +PG S + I
Sbjct: 185 NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 222
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
++++ IK +G G+FG V K+SG A+K + K K E +N E + L+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R F E R + Q+ Y+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 124/288 (43%), Gaps = 39/288 (13%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
M+RY + +G G F + + EV A K + K K + E+ E+ +
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST--EIAIHKS 98
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
+ +P++V ++D +Y V E + R K +E E R + Q QG+ Y+
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSY 174
H HRDLK NL ++ D +KI DFGLA +I + T Y APEVL +
Sbjct: 159 HNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKG 218
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
+S +VD+W++G I+ L+ +P F TS E Y + +
Sbjct: 219 -HSFEVDIWSLGCILYTLLVGKPPF-ETSCLKETY------------------IRIKKNE 258
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
Y P+ + N A +LI + DP+ RP+ AE L F
Sbjct: 259 YSVPRHI-----------NPVASALIRRMLHADPTLRPSVAELLTDEF 295
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
++++ IK +G G+FG V K+SG A+K + K K E +N E + L+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R F E R + Q+ Y+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
++++ IK +G G+FG V K+SG A+K + K K E +N E + L+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R F E R + Q+ Y+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
++++ IK +G G+FG V K+SG A+K + K K E +N E + L+
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 92
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R F E R + Q+ Y+
Sbjct: 93 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 152
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 153 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 209
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 210 YNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 110/204 (53%), Gaps = 15/204 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSHPNI 62
+++I E+GD FG V++A +K++ + A K + K S EE + + E+ L HPNI
Sbjct: 14 WEIIGELGD--FGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNI 69
Query: 63 VKLKEVIRENDILYFVFEYMECNLYQ-LMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGY 121
VKL + + L+ + E+ +M + E+ +E++++ C Q L Y+H
Sbjct: 70 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI 129
Query: 122 FHRDLKPENLLVSKD-TIKIADFGLAREINSRPPF---TEYVSTRWYRAPEVLL----QS 173
HRDLK N+L + D IK+ADFG++ + N+R ++ T ++ APEV++ +
Sbjct: 130 IHRDLKAGNILFTLDGDIKLADFGVSAK-NTRTXIQRRDSFIGTPYWMAPEVVMCETSKD 188
Query: 174 YLYSSKVDMWAMGAIMAELITLRP 197
Y K D+W++G + E+ + P
Sbjct: 189 RPYDYKADVWSLGITLIEMAEIEP 212
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V K++G A+K + K K E +N E + L+
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 90
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R F E R + Q+ Y+
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 150
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 151 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 207
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 123/237 (51%), Gaps = 20/237 (8%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E KL+K++G G FG VW S +V A+K +K S + L E ++ + H
Sbjct: 12 ESIKLVKKLGAGQFGEVWMGYYNNSTKV-AVKTLKPGTMSVQAF--LEEANLMKTLQHDK 68
Query: 62 IVKLKEVIRENDILYFVFEYM-ECNLYQLMKDREKC-FSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ + + +Y + E+M + +L +K E ++ ++ Q+ +G+AY+ ++
Sbjct: 69 LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 128
Query: 120 GYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVS-------TRWYRAPEVLL 171
Y HRDL+ N+LVS+ + KIADFGLAR I EY + +W APE +
Sbjct: 129 NYIHRDLRAANVLVSESLMCKIADFGLARVIED----NEYTAREGAKFPIKW-TAPEA-I 182
Query: 172 QSYLYSSKVDMWAMGAIMAELITLRPL-FPGTSEADEIYKICSVIGTPTQDSWADGL 227
++ K ++W+ G ++ E++T + +PG + AD + + P ++ D L
Sbjct: 183 NFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDEL 239
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
++++ IK +G G+FG V K+SG A+K + K K E +N E + L+
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 118
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 178
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + + T Y APE++L S
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGATWTLCGTPEYLAPEIIL-SKG 235
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 125/288 (43%), Gaps = 39/288 (13%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
M+RY + +G G F + + EV A K + K K + E+ E+ +
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST--EIAIHKS 98
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
+ +P++V ++D +Y V E + R K +E E R + Q QG+ Y+
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYV-STRWYRAPEVLLQSY 174
H HRDLK NL ++ D +KI DFGLA +I + + T Y APEVL +
Sbjct: 159 HNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKG 218
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
+S +VD+W++G I+ L+ +P F TS E Y + +
Sbjct: 219 -HSFEVDIWSLGCILYTLLVGKPPF-ETSCLKETY------------------IRIKKNE 258
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
Y P+ + N A +LI + DP+ RP+ AE L F
Sbjct: 259 YSVPRHI-----------NPVASALIRRMLHADPTLRPSVAELLTDEF 295
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 128/291 (43%), Gaps = 43/291 (14%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKY-------YSWEECVNLREVKSLRK 56
Y + +E+G G F V + K +G A K +KK+ S EE REV LR+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE--REVSILRQ 71
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
+ H N++ L +V + + E + L+ + +E SE E ++ Q+ G+ Y
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNY 130
Query: 116 MHQRGYFHRDLKPEN-LLVSKDT----IKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+H + H DLKPEN +L+ K+ IK+ DFGLA EI F T + APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
L + DMW++G I L++ F G ++ + + I SV
Sbjct: 191 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV---------------- 233
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
+Y F + S L A I L + KR T EAL+HP
Sbjct: 234 ---SYDFDEEFFSHTSEL-------AKDFIRKLLVKETRKRLTIQEALRHP 274
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 128/291 (43%), Gaps = 43/291 (14%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKY-------YSWEECVNLREVKSLRK 56
Y + +E+G G F V + K +G A K +KK+ S EE REV LR+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE--REVSILRQ 71
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
+ H N++ L +V + + E + L+ + +E SE E ++ Q+ G+ Y
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNY 130
Query: 116 MHQRGYFHRDLKPEN-LLVSKDT----IKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+H + H DLKPEN +L+ K+ IK+ DFGLA EI F T + APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
L + DMW++G I L++ F G ++ + + I SV
Sbjct: 191 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV---------------- 233
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
+Y F + S L A I L + KR T EAL+HP
Sbjct: 234 ---SYDFDEEFFSHTSEL-------AKDFIRKLLVKETRKRLTIQEALRHP 274
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
++++ IK +G G+FG V K+SG A+K + K K E +N E + L+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y AP ++L S
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPAIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 6/202 (2%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKM-KKKYYSWEECVN-LREVKSLRKMS 58
+++++ IK +G G+FG V ++G A+K + K+K +E + L E + L+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
P +VKL+ ++N LY V EY R FSE R + Q+ Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 RGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
+RDLKPENL++ + I++ DFGLA+ + R T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 SKVDMWAMGAIMAELITLRPLF 199
VD WA+G ++ E+ P F
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPF 238
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 106/199 (53%), Gaps = 15/199 (7%)
Query: 8 KEVGDGTFGSVWRAISKQSG---EV-VAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
K +G G FG V++ + K S EV VAIK +K Y + L E + + SH NI+
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 64 KLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYF 122
+L+ VI + + + EYME L + +++++ FS ++ + G+ Y+ Y
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYV 169
Query: 123 HRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVS-----TRWYRAPEVLLQSYL- 175
HRDL N+LV+ + + K++DFGL+R + P T S RW APE + SY
Sbjct: 170 HRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRW-TAPEAI--SYRK 226
Query: 176 YSSKVDMWAMGAIMAELIT 194
++S D+W+ G +M E++T
Sbjct: 227 FTSASDVWSFGIVMWEVMT 245
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 114/218 (52%), Gaps = 21/218 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E KL K++G G FG VW A + +V A+K MK S E L E ++ + H
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKV-AVKTMKPGSMSVEAF--LAEANVMKTLQHDK 244
Query: 62 IVKLKEVIRENDILYFVFEYM-ECNLYQLMKDREKCFSE-AEVRNWCFQVFQGLAYMHQR 119
+VKL V+ + I Y + E+M + +L +K E ++ ++ Q+ +G+A++ QR
Sbjct: 245 LVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 303
Query: 120 GYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVS-------TRWYRAPEVLL 171
Y HRDL+ N+LVS + KIADFGLAR I EY + +W APE +
Sbjct: 304 NYIHRDLRAANILVSASLVCKIADFGLARVIED----NEYTAREGAKFPIKW-TAPEA-I 357
Query: 172 QSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEI 208
++ K D+W+ G ++ E++T R +PG S + I
Sbjct: 358 NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 395
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 125/288 (43%), Gaps = 39/288 (13%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
M+RY + +G G F + + EV A K + K K + E+ E+ +
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST--EIAIHKS 98
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
+ +P++V ++D +Y V E + R K +E E R + Q QG+ Y+
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYV-STRWYRAPEVLLQSY 174
H HRDLK NL ++ D +KI DFGLA +I + + T Y APEVL +
Sbjct: 159 HNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKG 218
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
+S +VD+W++G I+ L+ +P F TS E Y + +
Sbjct: 219 -HSFEVDIWSLGCILYTLLVGKPPF-ETSCLKETY------------------IRIKKNE 258
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
Y P+ + N A +LI + DP+ RP+ AE L F
Sbjct: 259 YSVPRHI-----------NPVASALIRRMLHADPTLRPSVAELLTDEF 295
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 128/291 (43%), Gaps = 43/291 (14%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKY-------YSWEECVNLREVKSLRK 56
Y + +E+G G F V + K +G A K +KK+ S EE REV LR+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE--REVSILRQ 71
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
+ H N++ L +V + + E + L+ + +E SE E ++ Q+ G+ Y
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNY 130
Query: 116 MHQRGYFHRDLKPEN-LLVSKDT----IKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+H + H DLKPEN +L+ K+ IK+ DFGLA EI F T + APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
L + DMW++G I L++ F G ++ + + I
Sbjct: 191 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANIT------------------ 231
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
A++Y F + S L A I L + KR T EAL+HP
Sbjct: 232 -AVSYDFDEEFFSQTSEL-------AKDFIRKLLVKETRKRLTIQEALRHP 274
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 114/211 (54%), Gaps = 17/211 (8%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E KL K++G G FG VW A + +V A+K MK S E L E ++ + H
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKV-AVKTMKPGSMSVEAF--LAEANVMKTLQHDK 238
Query: 62 IVKLKEVIRENDILYFVFEYM-ECNLYQLMKDREKCFSE-AEVRNWCFQVFQGLAYMHQR 119
+VKL V+ + I Y + E+M + +L +K E ++ ++ Q+ +G+A++ QR
Sbjct: 239 LVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 297
Query: 120 GYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
Y HRDL+ N+LVS + KIADFGLAR + ++ P +W APE + ++
Sbjct: 298 NYIHRDLRAANILVSASLVCKIADFGLAR-VGAKFPI------KW-TAPEA-INFGSFTI 348
Query: 179 KVDMWAMGAIMAELITL-RPLFPGTSEADEI 208
K D+W+ G ++ E++T R +PG S + I
Sbjct: 349 KSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 379
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 128/291 (43%), Gaps = 43/291 (14%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKY-------YSWEECVNLREVKSLRK 56
Y + +E+G G F V + K +G A K +KK+ S EE REV LR+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE--REVSILRQ 71
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
+ H N++ L +V + + E + L+ + +E SE E ++ Q+ G+ Y
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNY 130
Query: 116 MHQRGYFHRDLKPEN-LLVSKDT----IKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+H + H DLKPEN +L+ K+ IK+ DFGLA EI F T + APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
L + DMW++G I L++ F G ++ + + I
Sbjct: 191 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANIT------------------ 231
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
A++Y F + S L A I L + KR T EAL+HP
Sbjct: 232 -AVSYDFDEEFFSQTSEL-------AKDFIRKLLVKETRKRLTIQEALRHP 274
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 128/291 (43%), Gaps = 43/291 (14%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKY-------YSWEECVNLREVKSLRK 56
Y + +E+G G F V + K +G A K +KK+ S EE REV LR+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE--REVSILRQ 71
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
+ H N++ L +V + + E + L+ + +E SE E ++ Q+ G+ Y
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNY 130
Query: 116 MHQRGYFHRDLKPEN-LLVSKDT----IKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+H + H DLKPEN +L+ K+ IK+ DFGLA EI F T + APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
L + DMW++G I L++ F G ++ + + I SV
Sbjct: 191 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV---------------- 233
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
+Y F + S L A I L + KR T EAL+HP
Sbjct: 234 ---SYDFDEEFFSHTSEL-------AKDFIRKLLVKETRKRLTIQEALRHP 274
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 116/224 (51%), Gaps = 10/224 (4%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSG----EVVAIKKMKKKYYSWEECVNLR-EVKSLRKM 57
+++L+K +G G+FG V+ + K SG ++ A+K +KK + V + E L ++
Sbjct: 26 QFELLKVLGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+HP IVKL + LY + +++ +E F+E +V+ + ++ L ++H
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 144
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYL 175
G +RDLKPEN+L+ ++ IK+ DFGL++E I+ + T Y APEV +
Sbjct: 145 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV-VNRRG 203
Query: 176 YSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSV-IGTP 218
++ D W+ G +M E++T F G + + I +G P
Sbjct: 204 HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 247
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 116/224 (51%), Gaps = 10/224 (4%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSG----EVVAIKKMKKKYYSWEECVNLR-EVKSLRKM 57
+++L+K +G G+FG V+ + K SG ++ A+K +KK + V + E L ++
Sbjct: 25 QFELLKVLGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+HP IVKL + LY + +++ +E F+E +V+ + ++ L ++H
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYL 175
G +RDLKPEN+L+ ++ IK+ DFGL++E I+ + T Y APEV +
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV-VNRRG 202
Query: 176 YSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSV-IGTP 218
++ D W+ G +M E++T F G + + I +G P
Sbjct: 203 HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V ++G A+K + K K E +N E + L+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V ++G A+K + K K E +N E + L+
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 83
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 84 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 143
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 144 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WTLCGTPEYLAPEIIL-SKG 200
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 201 YNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK--KKYYSWEECVNLREVKS-----L 54
++Y +G G V R + + +G A+K M+ + S E+ +RE L
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 55 RKMS-HPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDREKCFSEAEVRNWCFQVFQG 112
R+++ HP+I+ L + + ++ VF+ M + L+ + ++ SE E R+ + +
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEA 212
Query: 113 LAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
++++H HRDLKPEN+L+ + I+++DFG + + E T Y APE+L
Sbjct: 213 VSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILK 272
Query: 172 QSYL-----YSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSW-AD 225
S Y +VD+WA G I+ L+ P F W
Sbjct: 273 CSMDETHPGYGKEVDLWACGVILFTLLAGSPPF-----------------------WHRR 309
Query: 226 GLLLARAI---NYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
+L+ R I Y+F P S KD LI+ L DP R TA +ALQHPF
Sbjct: 310 QILMLRMIMEGQYQF----SSPEWDDRSSTVKD---LISRLLQVDPEARLTAEQALQHPF 362
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 143/330 (43%), Gaps = 61/330 (18%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
ERY+++ +G+GTFG V + G+ K+ + + E L E+ L+K
Sbjct: 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL-EINVLKK----- 72
Query: 62 IVKLKEVIRENDILYFV--------------FEYMECNLYQLMKDRE-KCFSEAEVRNWC 106
+KE +EN L + FE + N ++ +K+ + + VR+
Sbjct: 73 ---IKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMA 129
Query: 107 FQVFQGLAYMHQRGYFHRDLKPENLL--------------------VSKDTIKIADFGLA 146
+Q+ L ++H+ H DLKPEN+L V +I++ADFG A
Sbjct: 130 YQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA 189
Query: 147 REINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEAD 206
T V+TR YR PEV+L+ ++ D+W++G I+ E LF +
Sbjct: 190 --TFDHEHHTTIVATRHYRPPEVILE-LGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246
Query: 207 EIYKICSVIG---------TPTQDSWADGLLL--ARAINYKFPQLVGVPLSVLMPSANKD 255
+ + ++G T Q + G L+ + + ++ + PL M + +
Sbjct: 247 HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLE 306
Query: 256 AV---SLIASLCSWDPSKRPTAAEALQHPF 282
V L+ + +DP++R T AEAL HPF
Sbjct: 307 HVQLFDLMRRMLEFDPAQRITLAEALLHPF 336
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V ++G A+K + K K E +N E + L+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V ++G A+K + K K E +N E + L+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V ++G A+K + K K E +N E + L+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 98
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 215
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V ++G A+K + K K E +N E + L+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 98
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WTLCGTPEYLAPEIIL-SKG 215
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 143/330 (43%), Gaps = 61/330 (18%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
ERY+++ +G+GTFG V + G+ K+ + + E L E+ L+K
Sbjct: 51 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL-EINVLKK----- 104
Query: 62 IVKLKEVIRENDILYFV--------------FEYMECNLYQLMKDRE-KCFSEAEVRNWC 106
+KE +EN L + FE + N ++ +K+ + + VR+
Sbjct: 105 ---IKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMA 161
Query: 107 FQVFQGLAYMHQRGYFHRDLKPENLL--------------------VSKDTIKIADFGLA 146
+Q+ L ++H+ H DLKPEN+L V +I++ADFG A
Sbjct: 162 YQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA 221
Query: 147 REINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEAD 206
T V+TR YR PEV+L+ ++ D+W++G I+ E LF +
Sbjct: 222 --TFDHEHHTTIVATRHYRPPEVILE-LGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 278
Query: 207 EIYKICSVIG---------TPTQDSWADGLLL--ARAINYKFPQLVGVPLSVLMPSANKD 255
+ + ++G T Q + G L+ + + ++ + PL M + +
Sbjct: 279 HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLE 338
Query: 256 AV---SLIASLCSWDPSKRPTAAEALQHPF 282
V L+ + +DP++R T AEAL HPF
Sbjct: 339 HVQLFDLMRRMLEFDPAQRITLAEALLHPF 368
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V ++G A+K + K K E +N E + L+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
++++ IK +G G+FG V K+SG A+K + K K E +N E + L+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R FSE R + Q+ Y+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T APE++L S
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEALAPEIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 32/276 (11%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVI 69
+G G FG V + +G +A K +K + +E V E+ + ++ H N+++L +
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVK-NEISVMNQLDHANLIQLYDAF 155
Query: 70 RENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKP 128
+ + V EY++ L+ + D +E + + Q+ +G+ +MHQ H DLKP
Sbjct: 156 ESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKP 215
Query: 129 ENLL-VSKDT--IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAM 185
EN+L V++D IKI DFGLAR R T + APEV+ ++ S DMW++
Sbjct: 216 ENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFV-SFPTDMWSV 274
Query: 186 GAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFPQLVGVPL 245
G I L++ F G ++A+ + I + + + D
Sbjct: 275 GVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQD-------------------- 314
Query: 246 SVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
+++A I+ L + S R +A+EAL+HP
Sbjct: 315 ------ISEEAKEFISKLLIKEKSWRISASEALKHP 344
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 116/224 (51%), Gaps = 10/224 (4%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSG----EVVAIKKMKKKYYSWEECVNLR-EVKSLRKM 57
+++L+K +G G+FG V+ + K SG ++ A+K +KK + V + E L ++
Sbjct: 25 QFELLKVLGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+HP IVKL + LY + +++ +E F+E +V+ + ++ L ++H
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 118 QRGYFHRDLKPENLLVSKDT-IKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYL 175
G +RDLKPEN+L+ ++ IK+ DFGL++E I+ + T Y APEV +
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV-VNRRG 202
Query: 176 YSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSV-IGTP 218
++ D W+ G +M E++T F G + + I +G P
Sbjct: 203 HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 143/330 (43%), Gaps = 61/330 (18%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
ERY+++ +G+GTFG V + G+ K+ + + E L E+ L+K
Sbjct: 28 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL-EINVLKK----- 81
Query: 62 IVKLKEVIRENDILYFV--------------FEYMECNLYQLMKDRE-KCFSEAEVRNWC 106
+KE +EN L + FE + N ++ +K+ + + VR+
Sbjct: 82 ---IKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMA 138
Query: 107 FQVFQGLAYMHQRGYFHRDLKPENLL--------------------VSKDTIKIADFGLA 146
+Q+ L ++H+ H DLKPEN+L V +I++ADFG A
Sbjct: 139 YQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA 198
Query: 147 REINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEAD 206
T V+TR YR PEV+L+ ++ D+W++G I+ E LF +
Sbjct: 199 --TFDHEHHTTIVATRHYRPPEVILE-LGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 255
Query: 207 EIYKICSVIG---------TPTQDSWADGLLL--ARAINYKFPQLVGVPLSVLMPSANKD 255
+ + ++G T Q + G L+ + + ++ + PL M + +
Sbjct: 256 HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLE 315
Query: 256 AV---SLIASLCSWDPSKRPTAAEALQHPF 282
V L+ + +DP++R T AEAL HPF
Sbjct: 316 HVQLFDLMRRMLEFDPAQRITLAEALLHPF 345
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V ++G A+K + K K E +N E + L+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY R FSE R + Q+ Y+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENL++ + IK+ DFG A+ + R T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 119/251 (47%), Gaps = 15/251 (5%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEE----CVNLREVKSLRK 56
M + + + +G G FG V+ +G++ A+K + KK ++ +N R + SL
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 57 MSH-PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
P IV + D L F+ + M + FSEA++R + ++ GL +
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 116 MHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSY 174
MH R +RDLKP N+L+ + ++I+D GLA + + + P V T Y APEVL +
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGV 366
Query: 175 LYSSKVDMWAMGAIMAELITLRPLF--PGTSEADEIYKICSVIGTPTQDSWADGL----- 227
Y S D +++G ++ +L+ F T + EI ++ + DS++ L
Sbjct: 367 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE 426
Query: 228 -LLARAINYKF 237
LL R +N +
Sbjct: 427 GLLQRDVNRRL 437
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 119/251 (47%), Gaps = 15/251 (5%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEE----CVNLREVKSLRK 56
M + + + +G G FG V+ +G++ A+K + KK ++ +N R + SL
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 57 MSH-PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
P IV + D L F+ + M + FSEA++R + ++ GL +
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 116 MHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSY 174
MH R +RDLKP N+L+ + ++I+D GLA + + + P V T Y APEVL +
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGV 366
Query: 175 LYSSKVDMWAMGAIMAELITLRPLF--PGTSEADEIYKICSVIGTPTQDSWADGL----- 227
Y S D +++G ++ +L+ F T + EI ++ + DS++ L
Sbjct: 367 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE 426
Query: 228 -LLARAINYKF 237
LL R +N +
Sbjct: 427 GLLQRDVNRRL 437
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 119/251 (47%), Gaps = 15/251 (5%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEE----CVNLREVKSLRK 56
M + + + +G G FG V+ +G++ A+K + KK ++ +N R + SL
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 57 MSH-PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
P IV + D L F+ + M + FSEA++R + ++ GL +
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 116 MHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSY 174
MH R +RDLKP N+L+ + ++I+D GLA + + + P V T Y APEVL +
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGV 366
Query: 175 LYSSKVDMWAMGAIMAELITLRPLF--PGTSEADEIYKICSVIGTPTQDSWADGL----- 227
Y S D +++G ++ +L+ F T + EI ++ + DS++ L
Sbjct: 367 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE 426
Query: 228 -LLARAINYKF 237
LL R +N +
Sbjct: 427 GLLQRDVNRRL 437
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 138/296 (46%), Gaps = 47/296 (15%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQS---GEVVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+Y + +G+G++G V + ++ V +KK K + E +E++ LR++ H
Sbjct: 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRH 65
Query: 60 PNIVKLKEVI--RENDILYFVFEYMECNLYQLMKD-REKCFSEAEVRNWCFQVFQGLAYM 116
N+++L +V+ E +Y V EY C + +++ EK F + + Q+ GL Y+
Sbjct: 66 KNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYL 125
Query: 117 HQRGYFHRDLKPENLLVSK-DTIKIADFGLAREINSRPPFTEYVSTRW------YRAPEV 169
H +G H+D+KP NLL++ T+KI+ G+A ++ PF + R ++ PE+
Sbjct: 126 HSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALH---PFAADDTCRTSQGSPAFQPPEI 182
Query: 170 LLQSYLYSS-KVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLL 228
+S KVD+W+ G + + T L+P E D IYK+ IG +
Sbjct: 183 ANGLDTFSGFKVDIWSAGVTLYNITT--GLYP--FEGDNIYKLFENIGKGS--------- 229
Query: 229 LARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPFSR 284
Y P G PLS L+ + ++P+KR + + QH + R
Sbjct: 230 ------YAIPGDCGPPLS-----------DLLKGMLEYEPAKRFSIRQIRQHSWFR 268
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 119/251 (47%), Gaps = 15/251 (5%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEE----CVNLREVKSLRK 56
M + + + +G G FG V+ +G++ A+K + KK ++ +N R + SL
Sbjct: 187 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 246
Query: 57 MSH-PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAY 115
P IV + D L F+ + M + FSEA++R + ++ GL +
Sbjct: 247 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 306
Query: 116 MHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSY 174
MH R +RDLKP N+L+ + ++I+D GLA + + + P V T Y APEVL +
Sbjct: 307 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGV 365
Query: 175 LYSSKVDMWAMGAIMAELITLRPLF--PGTSEADEIYKICSVIGTPTQDSWADGL----- 227
Y S D +++G ++ +L+ F T + EI ++ + DS++ L
Sbjct: 366 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE 425
Query: 228 -LLARAINYKF 237
LL R +N +
Sbjct: 426 GLLQRDVNRRL 436
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 120/279 (43%), Gaps = 39/279 (13%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRKMSHPNIVKL 65
+G G F + + EV A K + K K + E+ E+ R ++H ++V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS--MEISIHRSLAHQHVVGF 80
Query: 66 KEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRD 125
+ND ++ V E + R K +E E R + Q+ G Y+H+ HRD
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 140
Query: 126 LKPENLLVSKD-TIKIADFGLAREINSRPPFTEYV-STRWYRAPEVLLQSYLYSSKVDMW 183
LK NL +++D +KI DFGLA ++ + + T Y APEVL + +S +VD+W
Sbjct: 141 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG-HSFEVDVW 199
Query: 184 AMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFPQLVGV 243
++G IM L+ +P F TS E Y L + Y P+ +
Sbjct: 200 SIGCIMYTLLVGKPPFE-TSCLKETY------------------LRIKKNEYSIPKHI-- 238
Query: 244 PLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
N A SLI + DP+ RPT E L F
Sbjct: 239 ---------NPVAASLIQKMLQTDPTARPTINELLNDEF 268
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 122/277 (44%), Gaps = 35/277 (12%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVI 69
+G G F V+ + +G++ A+K +KK ++ + E+ L+K+ H NIV L+++
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSP-AFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 70 RENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKP 128
Y V + + L+ + +R ++E + QV + Y+H+ G HRDLKP
Sbjct: 76 ESTTHYYLVMQLVSGGELFDRILER-GVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKP 134
Query: 129 ENLLV----SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWA 184
ENLL I I DFGL++ + + T Y APEVL Q YS VD W+
Sbjct: 135 ENLLYLTPEENSKIMITDFGLSK-MEQNGIMSTACGTPGYVAPEVLAQK-PYSKAVDCWS 192
Query: 185 MGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFPQLVGVP 244
+G I L+ P F +E+ KI + Y+F
Sbjct: 193 IGVITYILLCGYPPFYEETESKLFEKI-------------------KEGYYEFE------ 227
Query: 245 LSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
S ++ A I L DP++R T +AL HP
Sbjct: 228 -SPFWDDISESAKDFICHLLEKDPNERYTCEKALSHP 263
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 139/329 (42%), Gaps = 61/329 (18%)
Query: 3 RYKLIKEVGDGTFGSVWRAIS-KQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
RY+++ +G+G FG V I K G VA+K +K E + +V + PN
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPN 74
Query: 62 ----IVKLKEVIRENDILYFVFEYMECNLYQLMKDREKC-FSEAEVRNWCFQVFQGLAYM 116
V++ E + + VFE + + Y +K+ F +R +Q+ + + ++
Sbjct: 75 STFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFL 134
Query: 117 HQRGYFHRDLKPENLL-------------VSKD-------TIKIADFGLAREINSRPPFT 156
H H DLKPEN+L + +D IK+ DFG A + +
Sbjct: 135 HSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH--HS 192
Query: 157 EYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIG 216
VSTR YRAPEV+L + +S D+W++G I+ E +FP + + + ++G
Sbjct: 193 TLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILG 251
Query: 217 TPTQD----------------SWAD----GLLLARAINYKFPQLVGVPLSVLMPSANKDA 256
+ W + G ++RA PL M S + +
Sbjct: 252 PLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACK---------PLKEFMLSQDVEH 302
Query: 257 ---VSLIASLCSWDPSKRPTAAEALQHPF 282
LI + +DP+KR T EAL+HPF
Sbjct: 303 ERLFDLIQKMLEYDPAKRITLREALKHPF 331
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 120/279 (43%), Gaps = 39/279 (13%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRKMSHPNIVKL 65
+G G F + + EV A K + K K + E+ E+ R ++H ++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS--MEISIHRSLAHQHVVGF 82
Query: 66 KEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRD 125
+ND ++ V E + R K +E E R + Q+ G Y+H+ HRD
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 126 LKPENLLVSKD-TIKIADFGLAREINSRPPFTEYV-STRWYRAPEVLLQSYLYSSKVDMW 183
LK NL +++D +KI DFGLA ++ + + T Y APEVL + +S +VD+W
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKG-HSFEVDVW 201
Query: 184 AMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFPQLVGV 243
++G IM L+ +P F TS E Y L + Y P+ +
Sbjct: 202 SIGCIMYTLLVGKPPF-ETSCLKETY------------------LRIKKNEYSIPKHI-- 240
Query: 244 PLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
N A SLI + DP+ RPT E L F
Sbjct: 241 ---------NPVAASLIQKMLQTDPTARPTINELLNDEF 270
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 120/279 (43%), Gaps = 39/279 (13%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRKMSHPNIVKL 65
+G G F + + EV A K + K K + E+ E+ R ++H ++V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS--MEISIHRSLAHQHVVGF 106
Query: 66 KEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRD 125
+ND ++ V E + R K +E E R + Q+ G Y+H+ HRD
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 166
Query: 126 LKPENLLVSKD-TIKIADFGLAREINSRPPFTEYV-STRWYRAPEVLLQSYLYSSKVDMW 183
LK NL +++D +KI DFGLA ++ + + T Y APEVL + +S +VD+W
Sbjct: 167 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG-HSFEVDVW 225
Query: 184 AMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFPQLVGV 243
++G IM L+ +P F TS E Y L + Y P+ +
Sbjct: 226 SIGCIMYTLLVGKPPF-ETSCLKETY------------------LRIKKNEYSIPKHI-- 264
Query: 244 PLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
N A SLI + DP+ RPT E L F
Sbjct: 265 ---------NPVAASLIQKMLQTDPTARPTINELLNDEF 294
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 18/198 (9%)
Query: 6 LIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
++E+G G FG V W K VAIK +++ S E+ + EV + K+SHP
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDFIEEAEV--MMKLSHPK 63
Query: 62 IVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
+V+L V E + VFE+ME L ++ + F+ + C V +G+AY+ +
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAS 123
Query: 121 YFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQSYLY 176
HRDL N LV ++ IK++DFG+ R + +T T++ + +PEV S Y
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSR-Y 181
Query: 177 SSKVDMWAMGAIMAELIT 194
SSK D+W+ G +M E+ +
Sbjct: 182 SSKSDVWSFGVLMWEVFS 199
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 120/279 (43%), Gaps = 39/279 (13%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRKMSHPNIVKL 65
+G G F + + EV A K + K K + E+ E+ R ++H ++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS--MEISIHRSLAHQHVVGF 82
Query: 66 KEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRD 125
+ND ++ V E + R K +E E R + Q+ G Y+H+ HRD
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 126 LKPENLLVSKD-TIKIADFGLAREINSRPPFTEYV-STRWYRAPEVLLQSYLYSSKVDMW 183
LK NL +++D +KI DFGLA ++ + + T Y APEVL + +S +VD+W
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKG-HSFEVDVW 201
Query: 184 AMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFPQLVGV 243
++G IM L+ +P F TS E Y L + Y P+ +
Sbjct: 202 SIGCIMYTLLVGKPPF-ETSCLKETY------------------LRIKKNEYSIPKHI-- 240
Query: 244 PLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
N A SLI + DP+ RPT E L F
Sbjct: 241 ---------NPVAASLIQKMLQTDPTARPTINELLNDEF 270
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 120/279 (43%), Gaps = 39/279 (13%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRKMSHPNIVKL 65
+G G F + + EV A K + K K + E+ E+ R ++H ++V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS--MEISIHRSLAHQHVVGF 104
Query: 66 KEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRD 125
+ND ++ V E + R K +E E R + Q+ G Y+H+ HRD
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 164
Query: 126 LKPENLLVSKD-TIKIADFGLAREINSRPPFTEYV-STRWYRAPEVLLQSYLYSSKVDMW 183
LK NL +++D +KI DFGLA ++ + + T Y APEVL + +S +VD+W
Sbjct: 165 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG-HSFEVDVW 223
Query: 184 AMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFPQLVGV 243
++G IM L+ +P F TS E Y L + Y P+ +
Sbjct: 224 SIGCIMYTLLVGKPPF-ETSCLKETY------------------LRIKKNEYSIPKHI-- 262
Query: 244 PLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
N A SLI + DP+ RPT E L F
Sbjct: 263 ---------NPVAASLIQKMLQTDPTARPTINELLNDEF 292
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 120/279 (43%), Gaps = 39/279 (13%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRKMSHPNIVKL 65
+G G F + + EV A K + K K + E+ E+ R ++H ++V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS--MEISIHRSLAHQHVVGF 86
Query: 66 KEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRD 125
+ND ++ V E + R K +E E R + Q+ G Y+H+ HRD
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 146
Query: 126 LKPENLLVSKD-TIKIADFGLAREINSRPPFTEYV-STRWYRAPEVLLQSYLYSSKVDMW 183
LK NL +++D +KI DFGLA ++ + + T Y APEVL + +S +VD+W
Sbjct: 147 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKG-HSFEVDVW 205
Query: 184 AMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFPQLVGV 243
++G IM L+ +P F TS E Y L + Y P+ +
Sbjct: 206 SIGCIMYTLLVGKPPF-ETSCLKETY------------------LRIKKNEYSIPKHI-- 244
Query: 244 PLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
N A SLI + DP+ RPT E L F
Sbjct: 245 ---------NPVAASLIQKMLQTDPTARPTINELLNDEF 274
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 111/216 (51%), Gaps = 15/216 (6%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV--NLREVKSLRKMSHPN 61
+ + +G G+FG V A K + E+ AIK +KK ++ V + E + L + P
Sbjct: 21 FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPP 80
Query: 62 -IVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
+ +L + D LYFV EY+ + F E + + ++ GL ++H+RG
Sbjct: 81 FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRG 140
Query: 121 YFHRDLKPENLLV-SKDTIKIADFGLARE-----INSRPPFTEYVSTRWYRAPEVLLQSY 174
+RDLK +N+++ S+ IKIADFG+ +E + +R E+ T Y APE++
Sbjct: 141 IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTR----EFCGTPDYIAPEIIAYQ- 195
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYK 210
Y VD WA G ++ E++ +P F G E DE+++
Sbjct: 196 PYGKSVDWWAYGVLLYEMLAGQPPFDGEDE-DELFQ 230
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 6/207 (2%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL--REVKSLRKMSH 59
ERYK++ ++G G +V+ A VAIK + EE + REV + ++SH
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH 70
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
NIV + +V E+D Y V EY+E + S N+ Q+ G+ + H
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM 130
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLAREIN--SRPPFTEYVSTRWYRAPEVLLQSYLY 176
HRD+KP+N+L+ S T+KI DFG+A+ ++ S + T Y +PE +
Sbjct: 131 RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPE-QAKGEAT 189
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTS 203
D++++G ++ E++ P F G +
Sbjct: 190 DECTDIYSIGIVLYEMLVGEPPFNGET 216
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 141/298 (47%), Gaps = 39/298 (13%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSL---RKM 57
++ + L++ +G G++ V K++ + A+K +KK+ + +E ++ + + +
Sbjct: 4 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+HP +V L + L+FV EY+ R++ E R + ++ L Y+H
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 123
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFT--EYVSTRWYRAPEVLLQSY 174
+RG +RDLK +N+L+ S+ IK+ D+G+ +E RP T + T Y APE+ L+
Sbjct: 124 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPNYIAPEI-LRGE 181
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDS--WADGLLLARA 232
Y VD WA+G +M E++ R F +D P Q++ + ++L +
Sbjct: 182 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD----------NPDQNTEDYLFQVILEKQ 231
Query: 233 INYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKR----PTA--AEALQHPFSR 284
I + P+ + V A S++ S + DP +R P A+ HPF R
Sbjct: 232 I--RIPRSLSVK-----------AASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 276
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 141/298 (47%), Gaps = 39/298 (13%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSL---RKM 57
++ + L++ +G G++ V K++ + A+K +KK+ + +E ++ + + +
Sbjct: 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 67
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+HP +V L + L+FV EY+ R++ E R + ++ L Y+H
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 127
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFT--EYVSTRWYRAPEVLLQSY 174
+RG +RDLK +N+L+ S+ IK+ D+G+ +E RP T + T Y APE+ L+
Sbjct: 128 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPNYIAPEI-LRGE 185
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDS--WADGLLLARA 232
Y VD WA+G +M E++ R F +D P Q++ + ++L +
Sbjct: 186 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD----------NPDQNTEDYLFQVILEKQ 235
Query: 233 INYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKR----PTA--AEALQHPFSR 284
I + P+ + V A S++ S + DP +R P A+ HPF R
Sbjct: 236 I--RIPRSLSVK-----------AASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 280
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 5/195 (2%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL--REVKSLRKMSHP 60
Y L +G GTFG V + +G VA+K + ++ + V RE+++L+ HP
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 61 NIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+I+KL +VI + V EY+ L+ + + E E R Q+ + Y H+
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRV-EEMEARRLFQQILSAVDYCHRH 130
Query: 120 GYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
HRDLKPEN+L+ KIADFGL+ ++ + + Y APEV+
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGP 190
Query: 179 KVDMWAMGAIMAELI 193
+VD+W+ G I+ L+
Sbjct: 191 EVDIWSCGVILYALL 205
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 124/257 (48%), Gaps = 16/257 (6%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWE--ECVNLREVKSLRKMS 58
++ + +++ +G G FG+V+ A KQ+ ++A+K + K E E RE++ +
Sbjct: 13 IDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 59 HPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI+++ + +Y + E+ LY+ ++ + F E + ++ L Y H
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCH 131
Query: 118 QRGYFHRDLKPENLLVS-KDTIKIADFG---LAREINSRPPFTEYVSTRWYRAPEVLLQS 173
+R HRD+KPENLL+ K +KIADFG A + R T Y PE +++
Sbjct: 132 ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR----XMCGTLDYLPPE-MIEG 186
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSV-IGTPTQDSWADGLLLARA 232
+ KVD+W G + E + P F S + +I +V + P S L+++
Sbjct: 187 KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKL 246
Query: 233 INYKFPQLVGVPLSVLM 249
+ Y PQ +PL +M
Sbjct: 247 LRYHPPQ--RLPLKGVM 261
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 139/304 (45%), Gaps = 45/304 (14%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL----REVKSLRKMSH 59
Y+L + +G G F V R I++++G+ A+K + ++ ++ RE + H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 60 PNIVKLKEVIRENDILYFVFEYMECN--LYQLMKDREKCF--SEAEVRNWCFQVFQGLAY 115
P+IV+L E + +LY VFE+M+ ++++K + F SEA ++ Q+ + L Y
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 116 MHQRGYFHRDLKPEN-LLVSKDT---IKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVL 170
H HRD+KP LL SK+ +K+ FG+A ++ S V T + APEV
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEV- 206
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
++ Y VD+W G I+ L++ F GT E +G++
Sbjct: 207 VKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-----------------RLFEGIIKG 249
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF----SRVA 286
+ YK +S + A L+ + DP++R T EAL HP+ R A
Sbjct: 250 K---YKMNPRQWSHIS-------ESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYA 299
Query: 287 FMFH 290
+ H
Sbjct: 300 YKIH 303
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 4/196 (2%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL--REVKSLRKMSHPN 61
Y + + +G+G+FG V A ++ + VA+K + ++ + RE+ L+ + HP+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 62 IVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGY 121
I+KL +VI + V EY L+ + ++++ +E E R + Q+ + Y H+
Sbjct: 71 IIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKR-MTEDEGRRFFQQIICAIEYCHRHKI 129
Query: 122 FHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKV 180
HRDLKPENLL+ + +KIADFGL+ + + Y APEV+ +V
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEV 189
Query: 181 DMWAMGAIMAELITLR 196
D+W+ G ++ ++ R
Sbjct: 190 DVWSCGIVLYVMLVGR 205
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 139/304 (45%), Gaps = 45/304 (14%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL----REVKSLRKMSH 59
Y+L + +G G F V R I++++G+ A+K + ++ ++ RE + H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 60 PNIVKLKEVIRENDILYFVFEYMECN--LYQLMKDREKCF--SEAEVRNWCFQVFQGLAY 115
P+IV+L E + +LY VFE+M+ ++++K + F SEA ++ Q+ + L Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 116 MHQRGYFHRDLKPEN-LLVSKDT---IKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVL 170
H HRD+KP LL SK+ +K+ FG+A ++ S V T + APEV+
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 171 LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ Y VD+W G I+ L++ F GT E +G++
Sbjct: 206 KRE-PYGKPVDVWGCGVILFILLSGCLPFYGTKE-----------------RLFEGIIKG 247
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF----SRVA 286
+ YK +S + A L+ + DP++R T EAL HP+ R A
Sbjct: 248 K---YKMNPRQWSHIS-------ESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYA 297
Query: 287 FMFH 290
+ H
Sbjct: 298 YKIH 301
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V ++G A+K + K K E +N E + L+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY R FSE R + Q+ Y+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENL++ + I++ DFG A+ + R T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 127/287 (44%), Gaps = 36/287 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ Y + + +G G++ R + K + A+K + K E + + LR HPN
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEIL----LRYGQHPN 82
Query: 62 IVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGY 121
I+ LK+V + +Y V E M R+K FSE E + + + Y+H +G
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGV 142
Query: 122 FHRDLKPENLLVSKDT-----IKIADFGLAREINSRPP-FTEYVSTRWYRAPEVLLQSYL 175
HRDLKP N+L ++ ++I DFG A+++ + T + APEV L+
Sbjct: 143 VHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEV-LKRQG 201
Query: 176 YSSKVDMWAMGAIMAELIT-LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
Y D+W++G ++ ++ P G S+ E +I + IG+ G N
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANGPSDTPE--EILTRIGS--------GKFTLSGGN 251
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
+ + ++ A L++ + DP +R TA + LQHP
Sbjct: 252 WN--------------TVSETAKDLVSKMLHVDPHQRLTAKQVLQHP 284
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 35/285 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E+Y + +++G G FG V R + S + K +K K ++ + +E+ L H N
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK--GTDQVLVKKEISILNIARHRN 62
Query: 62 IVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
I+ L E + L +FE++ ++++ + +E E+ ++ QV + L ++H
Sbjct: 63 ILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN 122
Query: 121 YFHRDLKPENLLVS---KDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
H D++PEN++ TIKI +FG AR++ F + Y APEV Q + S
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEV-HQHDVVS 181
Query: 178 SKVDMWAMGAIMAELIT-LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
+ DMW++G ++ L++ + P T++ + ++ A Y
Sbjct: 182 TATDMWSLGTLVYVLLSGINPFLAETNQ-----------------QIIENIMNA---EYT 221
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
F + +S+ +A+ + L + R TA+EALQHP
Sbjct: 222 FDEEAFKEISI-------EAMDFVDRLLVKERKSRMTASEALQHP 259
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V ++G A+K + K K E +N E + L+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 98
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P + KL+ ++N LY V EY R FSE R + Q+ Y+
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENL++ + IK+ DFG A+ + R T Y APE++L S
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 215
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 127/287 (44%), Gaps = 36/287 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ Y + + +G G++ R + K + A+K + K E + + LR HPN
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEIL----LRYGQHPN 82
Query: 62 IVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGY 121
I+ LK+V + +Y V E M R+K FSE E + + + Y+H +G
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGV 142
Query: 122 FHRDLKPENLLVSKDT-----IKIADFGLAREINSRPP-FTEYVSTRWYRAPEVLLQSYL 175
HRDLKP N+L ++ ++I DFG A+++ + T + APEV L+
Sbjct: 143 VHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEV-LKRQG 201
Query: 176 YSSKVDMWAMGAIMAELIT-LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAIN 234
Y D+W++G ++ ++ P G S+ E +I + IG+ G N
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANGPSDTPE--EILTRIGS--------GKFTLSGGN 251
Query: 235 YKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
+ + ++ A L++ + DP +R TA + LQHP
Sbjct: 252 WN--------------TVSETAKDLVSKMLHVDPHQRLTAKQVLQHP 284
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V ++G A+K + K K E +N E + L+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 98
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P + KL+ ++N LY V EY R FSE R + Q+ Y+
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENL++ + IK+ DFG A+ + R T Y APE++L S
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 215
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 141/298 (47%), Gaps = 39/298 (13%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSL---RKM 57
++ + L++ +G G++ V K++ + A+K +KK+ + +E ++ + + +
Sbjct: 19 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 78
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+HP +V L + L+FV EY+ R++ E R + ++ L Y+H
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 138
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFT--EYVSTRWYRAPEVLLQSY 174
+RG +RDLK +N+L+ S+ IK+ D+G+ +E RP T + T Y APE+ L+
Sbjct: 139 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPNYIAPEI-LRGE 196
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDS--WADGLLLARA 232
Y VD WA+G +M E++ R F +D P Q++ + ++L +
Sbjct: 197 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD----------NPDQNTEDYLFQVILEKQ 246
Query: 233 INYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKR----PTA--AEALQHPFSR 284
I + P+ + V A S++ S + DP +R P A+ HPF R
Sbjct: 247 I--RIPRSMSVK-----------AASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFR 291
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V ++G A+K + K K E +N E + L+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R F E R + Q+ Y+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V ++G A+K + K K E +N E + L+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 98
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R F E R + Q+ Y+
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 158
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 215
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V ++G A+K + K K E +N E + L+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY+ R F E R + Q+ Y+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENLL+ + I++ DFG A+ + R T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 121/265 (45%), Gaps = 31/265 (11%)
Query: 3 RYKLIKEVGDGTFGSVWRA---ISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
R + K +G G G V + Q VAIK +K Y + L E + + H
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDH 109
Query: 60 PNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
PNI++L+ V+ + V EYME +L ++ + F+ ++ V G+ Y+
Sbjct: 110 PNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD 169
Query: 119 RGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVST------RWYRAPEVLL 171
GY HRDL N+LV + + K++DFGL+R + P Y +T RW APE +
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD-AAYTTTGGKIPIRWT-APEA-I 226
Query: 172 QSYLYSSKVDMWAMGAIMAELITL--RPLFPGT-----SEADEIYKICSVIGTPTQ---- 220
+SS D+W+ G +M E++ RP + T S +E Y++ + +G P
Sbjct: 227 AFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQL 286
Query: 221 --DSWADGLLLARAINYKFPQLVGV 243
D W RA +F Q+V V
Sbjct: 287 MLDCWHK----DRAQRPRFSQIVSV 307
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 106/204 (51%), Gaps = 17/204 (8%)
Query: 5 KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHP 60
K I+++G+G FG V + +GE VA+K +K + +E++ LR + H
Sbjct: 12 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 71
Query: 61 NIVKLKEVIREN--DILYFVFEYMECNLYQ--LMKDREKCFSEAEVRNWCFQVFQGLAYM 116
NIVK K + E+ + + + E++ + L K++ K + +++ + Q+ +G+ Y+
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLK-YAVQICKGMDYL 130
Query: 117 HQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTR-----WYRAPEVL 170
R Y HRDL N+LV S+ +KI DFGL + I + R WY APE L
Sbjct: 131 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECL 189
Query: 171 LQSYLYSSKVDMWAMGAIMAELIT 194
+QS Y + D+W+ G + EL+T
Sbjct: 190 MQSKFYIAS-DVWSFGVTLHELLT 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 106/204 (51%), Gaps = 17/204 (8%)
Query: 5 KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHP 60
K I+++G+G FG V + +GE VA+K +K + +E++ LR + H
Sbjct: 24 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83
Query: 61 NIVKLKEVIREN--DILYFVFEYMECNLYQ--LMKDREKCFSEAEVRNWCFQVFQGLAYM 116
NIVK K + E+ + + + E++ + L K++ K + +++ + Q+ +G+ Y+
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLK-YAVQICKGMDYL 142
Query: 117 HQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTR-----WYRAPEVL 170
R Y HRDL N+LV S+ +KI DFGL + I + R WY APE L
Sbjct: 143 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECL 201
Query: 171 LQSYLYSSKVDMWAMGAIMAELIT 194
+QS Y + D+W+ G + EL+T
Sbjct: 202 MQSKFYIAS-DVWSFGVTLHELLT 224
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 18/198 (9%)
Query: 6 LIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
++E+G G FG V W K VAIK +++ S E+ + EV + K+SHP
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDFIEEAEV--MMKLSHPK 63
Query: 62 IVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
+V+L V E + VFE+ME L ++ + F+ + C V +G+AY+ +
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 123
Query: 121 YFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQSYLY 176
HRDL N LV ++ IK++DFG+ R + +T T++ + +PEV S Y
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSR-Y 181
Query: 177 SSKVDMWAMGAIMAELIT 194
SSK D+W+ G +M E+ +
Sbjct: 182 SSKSDVWSFGVLMWEVFS 199
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V ++G A+K + K K E +N E + L+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 97
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P +VKL+ ++N LY V EY R F E R + Q+ Y+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENL++ + IK+ DFG A+ + R T Y APE++L S
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 214
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 18/198 (9%)
Query: 6 LIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
++E+G G FG V W K VAIK +++ S E+ + EV + K+SHP
Sbjct: 14 FVQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDFIEEAEV--MMKLSHPK 66
Query: 62 IVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
+V+L V E + VFE+ME L ++ + F+ + C V +G+AY+ +
Sbjct: 67 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 126
Query: 121 YFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQSYLY 176
HRDL N LV ++ IK++DFG+ R + +T T++ + +PEV S Y
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSR-Y 184
Query: 177 SSKVDMWAMGAIMAELIT 194
SSK D+W+ G +M E+ +
Sbjct: 185 SSKSDVWSFGVLMWEVFS 202
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 18/198 (9%)
Query: 6 LIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
++E+G G FG V W K VAIK +K+ S ++ + EV + K+SHP
Sbjct: 31 FVQEIGSGQFGLVHLGYWLNKDK-----VAIKTIKEGSMSEDDFIEEAEV--MMKLSHPK 83
Query: 62 IVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
+V+L V E + VFE+ME L ++ + F+ + C V +G+AY+ +
Sbjct: 84 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 143
Query: 121 YFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQSYLY 176
HRDL N LV ++ IK++DFG+ R + +T T++ + +PEV S Y
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSR-Y 201
Query: 177 SSKVDMWAMGAIMAELIT 194
SSK D+W+ G +M E+ +
Sbjct: 202 SSKSDVWSFGVLMWEVFS 219
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 18/198 (9%)
Query: 6 LIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
++E+G G FG V W K VAIK +++ S E+ + EV + K+SHP
Sbjct: 9 FVQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDFIEEAEV--MMKLSHPK 61
Query: 62 IVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
+V+L V E + VFE+ME L ++ + F+ + C V +G+AY+ +
Sbjct: 62 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 121
Query: 121 YFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQSYLY 176
HRDL N LV ++ IK++DFG+ R + +T T++ + +PEV S Y
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSR-Y 179
Query: 177 SSKVDMWAMGAIMAELIT 194
SSK D+W+ G +M E+ +
Sbjct: 180 SSKSDVWSFGVLMWEVFS 197
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 132/283 (46%), Gaps = 33/283 (11%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E + ++++G G+FG V++ I ++ +VVAIK + + E +E+ L + P
Sbjct: 27 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 62 IVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGY 121
+ K ++ L+ + EY+ L E ++ ++ +GL Y+H
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGG-SALDLLEPGPLDETQIATILREILKGLDYLHSEKK 145
Query: 122 FHRDLKPENLLVSK-DTIKIADFGLAREI-NSRPPFTEYVSTRWYRAPEVLLQSYLYSSK 179
HRD+K N+L+S+ +K+ADFG+A ++ +++ +V T ++ APEV+ QS Y SK
Sbjct: 146 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS-AYDSK 204
Query: 180 VDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFPQ 239
D+W++G IT L G E++ + + P + P
Sbjct: 205 ADIWSLG------ITAIELARGEPPHSELHPMKVLFLIPKNNP---------------PT 243
Query: 240 LVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
L G + +K + + + +PS RPTA E L+H F
Sbjct: 244 LEG--------NYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 278
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 107/210 (50%), Gaps = 19/210 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E +L ++G G FG VW + V AIK +K S E L+E + ++K+ H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPE--AFLQEAQVMKKLRHEK 74
Query: 62 IVKLKEVIRENDILYFVFEYME--CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ E I Y V EYM C L L + K ++ + Q+ G+AY+ +
Sbjct: 75 LVQLYAVVSEEPI-YIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 120 GYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVSTRW------YRAPEVLLQ 172
Y HRDL+ N+LV ++ + K+ADFGLAR I EY + + + APE L
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAALY 189
Query: 173 SYLYSSKVDMWAMGAIMAELITL-RPLFPG 201
++ K D+W+ G ++ EL T R +PG
Sbjct: 190 GR-FTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 5/195 (2%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNL--REVKSLRKMSHP 60
Y L +G GTFG V + +G VA+K + ++ + V RE+++L+ HP
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 61 NIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+I+KL +VI + V EY+ L+ + + E E R Q+ + Y H+
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRV-EEMEARRLFQQILSAVDYCHRH 130
Query: 120 GYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
HRDLKPEN+L+ KIADFGL+ ++ + Y APEV+
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGP 190
Query: 179 KVDMWAMGAIMAELI 193
+VD+W+ G I+ L+
Sbjct: 191 EVDIWSCGVILYALL 205
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 134/284 (47%), Gaps = 35/284 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E + ++++G G+FG V++ I ++ +VVAIK + + E +E+ L + P
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 62 IVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
+ K ++ L+ + EY+ + L++ E ++ ++ +GL Y+H
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLE--PGPLDETQIATILREILKGLDYLHSEK 124
Query: 121 YFHRDLKPENLLVSK-DTIKIADFGLAREI-NSRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
HRD+K N+L+S+ +K+ADFG+A ++ +++ +V T ++ APEV+ QS Y S
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS-AYDS 183
Query: 179 KVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFP 238
K D+W++G EL G E++ + + P + P
Sbjct: 184 KADIWSLGITAIELAR------GEPPHSELHPMKVLFLIPKNNP---------------P 222
Query: 239 QLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
L G + +K + + + +PS RPTA E L+H F
Sbjct: 223 TLEG--------NYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 258
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 134/284 (47%), Gaps = 35/284 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E + ++++G G+FG V++ I ++ +VVAIK + + E +E+ L + P
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 62 IVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
+ K ++ L+ + EY+ + L++ E ++ ++ +GL Y+H
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLE--PGPLDETQIATILREILKGLDYLHSEK 124
Query: 121 YFHRDLKPENLLVSK-DTIKIADFGLAREI-NSRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
HRD+K N+L+S+ +K+ADFG+A ++ +++ +V T ++ APEV+ QS Y S
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS-AYDS 183
Query: 179 KVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFP 238
K D+W++G EL G E++ + + P + P
Sbjct: 184 KADIWSLGITAIELAR------GEPPHSELHPMKVLFLIPKNNP---------------P 222
Query: 239 QLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
L G + +K + + + +PS RPTA E L+H F
Sbjct: 223 TLEG--------NYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 258
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 141/298 (47%), Gaps = 39/298 (13%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSL---RKM 57
++ + L++ +G G++ V K++ + A++ +KK+ + +E ++ + + +
Sbjct: 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS 110
Query: 58 SHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
+HP +V L + L+FV EY+ R++ E R + ++ L Y+H
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 170
Query: 118 QRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFT--EYVSTRWYRAPEVLLQSY 174
+RG +RDLK +N+L+ S+ IK+ D+G+ +E RP T + T Y APE+ L+
Sbjct: 171 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSTFCGTPNYIAPEI-LRGE 228
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDS--WADGLLLARA 232
Y VD WA+G +M E++ R F +D P Q++ + ++L +
Sbjct: 229 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD----------NPDQNTEDYLFQVILEKQ 278
Query: 233 INYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKR----PTA--AEALQHPFSR 284
I + P+ + V A S++ S + DP +R P A+ HPF R
Sbjct: 279 I--RIPRSLSVK-----------AASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 323
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 134/284 (47%), Gaps = 35/284 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E + ++++G G+FG V++ I ++ +VVAIK + + E +E+ L + P
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 62 IVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
+ K ++ L+ + EY+ + L++ E ++ ++ +GL Y+H
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLE--PGPLDETQIATILREILKGLDYLHSEK 139
Query: 121 YFHRDLKPENLLVSK-DTIKIADFGLAREI-NSRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
HRD+K N+L+S+ +K+ADFG+A ++ +++ +V T ++ APEV+ QS Y S
Sbjct: 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS-AYDS 198
Query: 179 KVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFP 238
K D+W++G EL G E++ + + P + P
Sbjct: 199 KADIWSLGITAIELAR------GEPPHSELHPMKVLFLIPKNNP---------------P 237
Query: 239 QLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
L G + +K + + + +PS RPTA E L+H F
Sbjct: 238 TLEG--------NYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 29/264 (10%)
Query: 3 RYKLIKEVGDGTFGSVWRA---ISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
R + K +G G G V + Q VAIK +K Y + L E + + H
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDH 109
Query: 60 PNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
PNI++L+ V+ + V EYME +L ++ + F+ ++ V G+ Y+
Sbjct: 110 PNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD 169
Query: 119 RGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVST-----RWYRAPEVLLQ 172
GY HRDL N+LV + + K++DFGL+R + P + RW APE +
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWT-APEA-IA 227
Query: 173 SYLYSSKVDMWAMGAIMAELITL--RPLFPGT-----SEADEIYKICSVIGTPTQ----- 220
+SS D+W+ G +M E++ RP + T S +E Y++ + +G P
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLM 287
Query: 221 -DSWADGLLLARAINYKFPQLVGV 243
D W RA +F Q+V V
Sbjct: 288 LDCWHK----DRAQRPRFSQIVSV 307
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 107/210 (50%), Gaps = 19/210 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E +L ++G G FG VW + V AIK +K S E L+E + ++K+ H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPE--AFLQEAQVMKKLRHEK 74
Query: 62 IVKLKEVIRENDILYFVFEYME--CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ E I Y V EYM C L L + K ++ + Q+ G+AY+ +
Sbjct: 75 LVQLYAVVSEEPI-YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 120 GYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVSTRW------YRAPEVLLQ 172
Y HRDL+ N+LV ++ + K+ADFGLAR I EY + + + APE L
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAALY 189
Query: 173 SYLYSSKVDMWAMGAIMAELITL-RPLFPG 201
++ K D+W+ G ++ EL T R +PG
Sbjct: 190 GR-FTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 115/214 (53%), Gaps = 31/214 (14%)
Query: 2 ERY-KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSL 54
ER+ K ++++G G FGSV + + +GEVVA+KK++ +S EE + RE++ L
Sbjct: 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEIL 65
Query: 55 RKMSHPNIVKLKEVI----RENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQV 109
+ + H NIVK K V R N L + EY+ +L ++ ++ ++ + Q+
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 110 FQGLAYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTR------ 162
+G+ Y+ + Y HRDL N+LV +++ +KI DFGL + + P E+ +
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEFFKVKEPGESP 180
Query: 163 --WYRAPEVLLQSYLYSSKVDMWAMGAIMAELIT 194
WY APE L +S +S D+W+ G ++ EL T
Sbjct: 181 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 212
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 125/263 (47%), Gaps = 31/263 (11%)
Query: 5 KLIKEVGDGTFGSVWRAISKQSGE---VVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
K+ + +G G FG V K G+ VAIK +K Y + L E + + HPN
Sbjct: 46 KIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPN 105
Query: 62 IVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
+V L+ V+ + V E+ME L ++ + F+ ++ + G+ Y+ G
Sbjct: 106 VVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMG 165
Query: 121 YFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVST------RWYRAPEVLLQS 173
Y HRDL N+LV+ + + K++DFGL+R I P Y +T RW APE +Q
Sbjct: 166 YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAV-YTTTGGKIPVRW-TAPEA-IQY 222
Query: 174 YLYSSKVDMWAMGAIMAELITL--RPLFPGTSEA-----DEIYKICSVIGTPTQ------ 220
++S D+W+ G +M E+++ RP + +++ +E Y++ + + P
Sbjct: 223 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPMDCPAGLHQLML 282
Query: 221 DSWADGLLLARAINYKFPQLVGV 243
D W RA KF Q+VG+
Sbjct: 283 DCWQK----ERAERPKFEQIVGI 301
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 10/204 (4%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK----KYYSWEECVNLREVKSLRK 56
+++++ IK +G G+FG V ++G A+K + K K E +N E + L+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--EKRILQA 98
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
++ P + KL+ ++N LY V EY R F E R + Q+ Y+
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 158
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL 175
H +RDLKPENL++ + IK+ DFG A+ + R T Y APE++L S
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 215
Query: 176 YSSKVDMWAMGAIMAELITLRPLF 199
Y+ VD WA+G ++ E+ P F
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 115/214 (53%), Gaps = 31/214 (14%)
Query: 2 ERY-KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSL 54
ER+ K ++++G G FGSV + + +GEVVA+KK++ +S EE + RE++ L
Sbjct: 10 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEIL 66
Query: 55 RKMSHPNIVKLKEVI----RENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQV 109
+ + H NIVK K V R N L + EY+ +L ++ ++ ++ + Q+
Sbjct: 67 KSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 124
Query: 110 FQGLAYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTR------ 162
+G+ Y+ + Y HR+L N+LV +++ +KI DFGL + + P EY +
Sbjct: 125 CKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVL---PQDKEYYKVKEPGESP 181
Query: 163 --WYRAPEVLLQSYLYSSKVDMWAMGAIMAELIT 194
WY APE L +S +S D+W+ G ++ EL T
Sbjct: 182 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 123/257 (47%), Gaps = 16/257 (6%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWE--ECVNLREVKSLRKMS 58
++ + + + +G G FG+V+ A KQ+ ++A+K + K E E RE++ +
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 59 HPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI+++ + +Y + E+ LY+ ++ + F E + ++ L Y H
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCH 131
Query: 118 QRGYFHRDLKPENLLVS-KDTIKIADFG---LAREINSRPPFTEYVSTRWYRAPEVLLQS 173
+R HRD+KPENLL+ K +KIADFG A + R T Y PE +++
Sbjct: 132 ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR----XMCGTLDYLPPE-MIEG 186
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSV-IGTPTQDSWADGLLLARA 232
+ KVD+W G + E + P F S + +I +V + P S L+++
Sbjct: 187 KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKL 246
Query: 233 INYKFPQLVGVPLSVLM 249
+ Y PQ +PL +M
Sbjct: 247 LRYHPPQR--LPLKGVM 261
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 123/257 (47%), Gaps = 16/257 (6%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWE--ECVNLREVKSLRKMS 58
++ + + + +G G FG+V+ A KQ+ ++A+K + K E E RE++ +
Sbjct: 14 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 73
Query: 59 HPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI+++ + +Y + E+ LY+ ++ + F E + ++ L Y H
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCH 132
Query: 118 QRGYFHRDLKPENLLVS-KDTIKIADFG---LAREINSRPPFTEYVSTRWYRAPEVLLQS 173
+R HRD+KPENLL+ K +KIADFG A + R T Y PE +++
Sbjct: 133 ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR----XMCGTLDYLPPE-MIEG 187
Query: 174 YLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSV-IGTPTQDSWADGLLLARA 232
+ KVD+W G + E + P F S + +I +V + P S L+++
Sbjct: 188 KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKL 247
Query: 233 INYKFPQLVGVPLSVLM 249
+ Y PQ +PL +M
Sbjct: 248 LRYHPPQR--LPLKGVM 262
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 116/222 (52%), Gaps = 23/222 (10%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E KL++ +G G FG VW +V A+K +K+ S + L E ++++ H
Sbjct: 8 ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDAF--LAEANLMKQLQHQR 64
Query: 62 IVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKC-FSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ + I Y + EYME +L +K + ++ + Q+ +G+A++ +R
Sbjct: 65 LVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 123
Query: 120 GYFHRDLKPENLLVSKDTI--KIADFGLAREINSRPPFTEYVS-------TRWYRAPEVL 170
Y HRDL+ N+LVS DT+ KIADFGLAR I EY + +W APE
Sbjct: 124 NYIHRDLRAANILVS-DTLSCKIADFGLARLIED----NEYTAREGAKFPIKW-TAPEA- 176
Query: 171 LQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ ++ K D+W+ G ++ E++T R +PG + + I +
Sbjct: 177 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 218
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 134/299 (44%), Gaps = 36/299 (12%)
Query: 4 YKLIKEV-GDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRK-MSHPN 61
Y+L ++V G+G V I+ + + A+K ++K+ V REV+ L + H N
Sbjct: 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRV-FREVEMLYQCQGHRN 72
Query: 62 IVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGY 121
+++L E E D Y VFE M + + F+E E V L ++H +G
Sbjct: 73 VLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGI 132
Query: 122 FHRDLKPENLLVSKDT----IKIADFGLAREIN--------SRPPFTEYVSTRWYRAPEV 169
HRDLKPEN+L +KI DFGL I S P + Y APEV
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 170 L----LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEAD---EIYKICSVIGTPTQDS 222
+ ++ +Y + D+W++G I+ L++ P F G +D + + C +S
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFES 252
Query: 223 WADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
+G Y+FP +S A KD LI+ L D +R +AA+ LQHP
Sbjct: 253 IQEG-------KYEFPDKDWAHISC----AAKD---LISKLLVRDAKQRLSAAQVLQHP 297
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 114/214 (53%), Gaps = 31/214 (14%)
Query: 2 ERY-KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSL 54
ER+ K ++++G G FGSV + + +GEVVA+KK++ +S EE + RE++ L
Sbjct: 27 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEIL 83
Query: 55 RKMSHPNIVKLKEVI----RENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQV 109
+ + H NIVK K V R N L + EY+ +L ++ ++ ++ + Q+
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 141
Query: 110 FQGLAYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTR------ 162
+G+ Y+ + Y HRDL N+LV +++ +KI DFGL + + P E +
Sbjct: 142 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESP 198
Query: 163 --WYRAPEVLLQSYLYSSKVDMWAMGAIMAELIT 194
WY APE L +S +S D+W+ G ++ EL T
Sbjct: 199 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 230
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 114/214 (53%), Gaps = 31/214 (14%)
Query: 2 ERY-KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSL 54
ER+ K ++++G G FGSV + + +GEVVA+KK++ +S EE + RE++ L
Sbjct: 27 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEIL 83
Query: 55 RKMSHPNIVKLKEVI----RENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQV 109
+ + H NIVK K V R N L + EY+ +L ++ ++ ++ + Q+
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 141
Query: 110 FQGLAYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTR------ 162
+G+ Y+ + Y HRDL N+LV +++ +KI DFGL + + P E +
Sbjct: 142 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESP 198
Query: 163 --WYRAPEVLLQSYLYSSKVDMWAMGAIMAELIT 194
WY APE L +S +S D+W+ G ++ EL T
Sbjct: 199 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 230
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 114/214 (53%), Gaps = 31/214 (14%)
Query: 2 ERY-KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSL 54
ER+ K ++++G G FGSV + + +GEVVA+KK++ +S EE + RE++ L
Sbjct: 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEIL 96
Query: 55 RKMSHPNIVKLKEVI----RENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQV 109
+ + H NIVK K V R N L + EY+ +L ++ ++ ++ + Q+
Sbjct: 97 KSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 154
Query: 110 FQGLAYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTR------ 162
+G+ Y+ + Y HRDL N+LV +++ +KI DFGL + + P E +
Sbjct: 155 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESP 211
Query: 163 --WYRAPEVLLQSYLYSSKVDMWAMGAIMAELIT 194
WY APE L +S +S D+W+ G ++ EL T
Sbjct: 212 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 243
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 114/214 (53%), Gaps = 31/214 (14%)
Query: 2 ERY-KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSL 54
ER+ K ++++G G FGSV + + +GEVVA+KK++ +S EE + RE++ L
Sbjct: 14 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEIL 70
Query: 55 RKMSHPNIVKLKEVI----RENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQV 109
+ + H NIVK K V R N L + EY+ +L ++ ++ ++ + Q+
Sbjct: 71 KSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 128
Query: 110 FQGLAYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTR------ 162
+G+ Y+ + Y HRDL N+LV +++ +KI DFGL + + P E +
Sbjct: 129 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESP 185
Query: 163 --WYRAPEVLLQSYLYSSKVDMWAMGAIMAELIT 194
WY APE L +S +S D+W+ G ++ EL T
Sbjct: 186 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 114/214 (53%), Gaps = 31/214 (14%)
Query: 2 ERY-KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSL 54
ER+ K ++++G G FGSV + + +GEVVA+KK++ +S EE + RE++ L
Sbjct: 12 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEIL 68
Query: 55 RKMSHPNIVKLKEVI----RENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQV 109
+ + H NIVK K V R N L + EY+ +L ++ ++ ++ + Q+
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 126
Query: 110 FQGLAYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTR------ 162
+G+ Y+ + Y HRDL N+LV +++ +KI DFGL + + P E +
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESP 183
Query: 163 --WYRAPEVLLQSYLYSSKVDMWAMGAIMAELIT 194
WY APE L +S +S D+W+ G ++ EL T
Sbjct: 184 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 114/214 (53%), Gaps = 31/214 (14%)
Query: 2 ERY-KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSL 54
ER+ K ++++G G FGSV + + +GEVVA+KK++ +S EE + RE++ L
Sbjct: 16 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEIL 72
Query: 55 RKMSHPNIVKLKEVI----RENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQV 109
+ + H NIVK K V R N L + EY+ +L ++ ++ ++ + Q+
Sbjct: 73 KSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 130
Query: 110 FQGLAYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTR------ 162
+G+ Y+ + Y HRDL N+LV +++ +KI DFGL + + P E +
Sbjct: 131 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESP 187
Query: 163 --WYRAPEVLLQSYLYSSKVDMWAMGAIMAELIT 194
WY APE L +S +S D+W+ G ++ EL T
Sbjct: 188 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 219
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 114/214 (53%), Gaps = 31/214 (14%)
Query: 2 ERY-KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSL 54
ER+ K ++++G G FGSV + + +GEVVA+KK++ +S EE + RE++ L
Sbjct: 13 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEIL 69
Query: 55 RKMSHPNIVKLKEVI----RENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQV 109
+ + H NIVK K V R N L + EY+ +L ++ ++ ++ + Q+
Sbjct: 70 KSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 127
Query: 110 FQGLAYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTR------ 162
+G+ Y+ + Y HRDL N+LV +++ +KI DFGL + + P E +
Sbjct: 128 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESP 184
Query: 163 --WYRAPEVLLQSYLYSSKVDMWAMGAIMAELIT 194
WY APE L +S +S D+W+ G ++ EL T
Sbjct: 185 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 216
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 116/222 (52%), Gaps = 23/222 (10%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E KL++ +G G FG VW +V A+K +K+ S + L E ++++ H
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDAF--LAEANLMKQLQHQR 75
Query: 62 IVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKC-FSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ + I Y + EYME +L +K + ++ + Q+ +G+A++ +R
Sbjct: 76 LVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 120 GYFHRDLKPENLLVSKDTI--KIADFGLAREINSRPPFTEYVS-------TRWYRAPEVL 170
Y HRDL+ N+LVS DT+ KIADFGLAR I EY + +W APE
Sbjct: 135 NYIHRDLRAANILVS-DTLSCKIADFGLARLIED----NEYTAREGAKFPIKW-TAPEA- 187
Query: 171 LQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ ++ K D+W+ G ++ E++T R +PG + + I +
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 229
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 116/222 (52%), Gaps = 23/222 (10%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E KL++ +G G FG VW +V A+K +K+ S + L E ++++ H
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDAF--LAEANLMKQLQHQR 69
Query: 62 IVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKC-FSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ + I Y + EYME +L +K + ++ + Q+ +G+A++ +R
Sbjct: 70 LVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 120 GYFHRDLKPENLLVSKDTI--KIADFGLAREINSRPPFTEYVS-------TRWYRAPEVL 170
Y HRDL+ N+LVS DT+ KIADFGLAR I EY + +W APE
Sbjct: 129 NYIHRDLRAANILVS-DTLSCKIADFGLARLIED----NEYTAREGAKFPIKW-TAPEA- 181
Query: 171 LQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ ++ K D+W+ G ++ E++T R +PG + + I +
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 114/214 (53%), Gaps = 31/214 (14%)
Query: 2 ERY-KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSL 54
ER+ K ++++G G FGSV + + +GEVVA+KK++ +S EE + RE++ L
Sbjct: 15 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEIL 71
Query: 55 RKMSHPNIVKLKEVI----RENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQV 109
+ + H NIVK K V R N L + EY+ +L ++ ++ ++ + Q+
Sbjct: 72 KSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 129
Query: 110 FQGLAYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTR------ 162
+G+ Y+ + Y HRDL N+LV +++ +KI DFGL + + P E +
Sbjct: 130 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESP 186
Query: 163 --WYRAPEVLLQSYLYSSKVDMWAMGAIMAELIT 194
WY APE L +S +S D+W+ G ++ EL T
Sbjct: 187 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 218
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 114/214 (53%), Gaps = 31/214 (14%)
Query: 2 ERY-KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSL 54
ER+ K ++++G G FGSV + + +GEVVA+KK++ +S EE + RE++ L
Sbjct: 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEIL 65
Query: 55 RKMSHPNIVKLKEVI----RENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQV 109
+ + H NIVK K V R N L + EY+ +L ++ ++ ++ + Q+
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 110 FQGLAYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTR------ 162
+G+ Y+ + Y HRDL N+LV +++ +KI DFGL + + P E +
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESP 180
Query: 163 --WYRAPEVLLQSYLYSSKVDMWAMGAIMAELIT 194
WY APE L +S +S D+W+ G ++ EL T
Sbjct: 181 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 212
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 139/289 (48%), Gaps = 44/289 (15%)
Query: 1 MERYKLI--KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
MER + ++G G +G V+ + K+ VA+K +K+ EE L+E ++++
Sbjct: 8 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 65
Query: 59 HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNW-CFQVFQGLAYM 116
HPN+V+L V Y + E+M NL +++ + A V + Q+ + Y+
Sbjct: 66 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQ 172
++ + HRDL N LV ++ +K+ADFGL+R + + FT + ++ + APE L
Sbjct: 126 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTFTAHAGAKFPIKWTAPESLAY 184
Query: 173 SYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ +S K D+WA G ++ E+ T + P +PG + ++Y+ LL
Sbjct: 185 NK-FSIKSDVWAFGVLLWEIATYGMSP-YPGI-DPSQVYE-----------------LLE 224
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
+ +Y+ + G P V L+ + W+PS RP+ AE Q
Sbjct: 225 K--DYRMERPEGCPEKVY---------ELMRACWQWNPSDRPSFAEIHQ 262
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 109/210 (51%), Gaps = 19/210 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E +L ++G G FG VW + V AIK +K S E L+E + ++K+ H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPE--AFLQEAQVMKKLRHEK 74
Query: 62 IVKLKEVIRENDILYFVFEYM-ECNLYQLMK-DREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ E I Y V EYM + +L +K + K ++ + Q+ G+AY+ +
Sbjct: 75 LVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 120 GYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVSTRW------YRAPEVLLQ 172
Y HRDL+ N+LV ++ + K+ADFGLAR I EY + + + APE L
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAALY 189
Query: 173 SYLYSSKVDMWAMGAIMAELITL-RPLFPG 201
++ K D+W+ G ++ EL T R +PG
Sbjct: 190 GR-FTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 116/222 (52%), Gaps = 23/222 (10%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E KL++ +G G FG VW +V A+K +K+ S + L E ++++ H
Sbjct: 23 ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDAF--LAEANLMKQLQHQR 79
Query: 62 IVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKC-FSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ + I Y + EYME +L +K + ++ + Q+ +G+A++ +R
Sbjct: 80 LVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 138
Query: 120 GYFHRDLKPENLLVSKDTI--KIADFGLAREINSRPPFTEYVS-------TRWYRAPEVL 170
Y HRDL+ N+LVS DT+ KIADFGLAR I EY + +W APE
Sbjct: 139 NYIHRDLRAANILVS-DTLSCKIADFGLARLIED----NEYTAREGAKFPIKW-TAPEA- 191
Query: 171 LQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ ++ K D+W+ G ++ E++T R +PG + + I +
Sbjct: 192 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 233
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 114/214 (53%), Gaps = 31/214 (14%)
Query: 2 ERY-KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSL 54
ER+ K ++++G G FGSV + + +GEVVA+KK++ +S EE + RE++ L
Sbjct: 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEIL 65
Query: 55 RKMSHPNIVKLKEVI----RENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQV 109
+ + H NIVK K V R N L + EY+ +L ++ ++ ++ + Q+
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 110 FQGLAYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTR------ 162
+G+ Y+ + Y HRDL N+LV +++ +KI DFGL + + P E +
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESP 180
Query: 163 --WYRAPEVLLQSYLYSSKVDMWAMGAIMAELIT 194
WY APE L +S +S D+W+ G ++ EL T
Sbjct: 181 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 212
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 116/222 (52%), Gaps = 23/222 (10%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E KL++ +G G FG VW +V A+K +K+ S + L E ++++ H
Sbjct: 18 ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDAF--LAEANLMKQLQHQR 74
Query: 62 IVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKC-FSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ + I Y + EYME +L +K + ++ + Q+ +G+A++ +R
Sbjct: 75 LVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 133
Query: 120 GYFHRDLKPENLLVSKDTI--KIADFGLAREINSRPPFTEYVS-------TRWYRAPEVL 170
Y HRDL+ N+LVS DT+ KIADFGLAR I EY + +W APE
Sbjct: 134 NYIHRDLRAANILVS-DTLSCKIADFGLARLIED----NEYTAREGAKFPIKW-TAPEA- 186
Query: 171 LQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ ++ K D+W+ G ++ E++T R +PG + + I +
Sbjct: 187 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 228
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 114/214 (53%), Gaps = 31/214 (14%)
Query: 2 ERY-KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSL 54
ER+ K ++++G G FGSV + + +GEVVA+KK++ +S EE + RE++ L
Sbjct: 7 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEIL 63
Query: 55 RKMSHPNIVKLKEVI----RENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQV 109
+ + H NIVK K V R N L + EY+ +L ++ ++ ++ + Q+
Sbjct: 64 KSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 121
Query: 110 FQGLAYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTR------ 162
+G+ Y+ + Y HRDL N+LV +++ +KI DFGL + + P E +
Sbjct: 122 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESP 178
Query: 163 --WYRAPEVLLQSYLYSSKVDMWAMGAIMAELIT 194
WY APE L +S +S D+W+ G ++ EL T
Sbjct: 179 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 210
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 114/214 (53%), Gaps = 31/214 (14%)
Query: 2 ERY-KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSL 54
ER+ K ++++G G FGSV + + +GEVVA+KK++ +S EE + RE++ L
Sbjct: 8 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEIL 64
Query: 55 RKMSHPNIVKLKEVI----RENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQV 109
+ + H NIVK K V R N L + EY+ +L ++ ++ ++ + Q+
Sbjct: 65 KSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 122
Query: 110 FQGLAYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTR------ 162
+G+ Y+ + Y HRDL N+LV +++ +KI DFGL + + P E +
Sbjct: 123 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESP 179
Query: 163 --WYRAPEVLLQSYLYSSKVDMWAMGAIMAELIT 194
WY APE L +S +S D+W+ G ++ EL T
Sbjct: 180 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 211
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 128/288 (44%), Gaps = 47/288 (16%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVI 69
+G G FG + +++GEV+ +K++ + + + L+EVK +R + HPN++K V+
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIR-FDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 70 RENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKP 128
++ L F+ EY++ L ++K + + ++ ++ + G+AY+H HRDL
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNS 136
Query: 129 ENLLVSKD-TIKIADFGLAR---------------EINSRPPFTEYVSTRWYRAPEVLLQ 172
N LV ++ + +ADFGLAR + R V ++ APE ++
Sbjct: 137 HNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE-MIN 195
Query: 173 SYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARA 232
Y KVD+++ G ++ E+I G AD Y L R
Sbjct: 196 GRSYDEKVDVFSFGIVLCEII-------GRVNADPDY-------------------LPRT 229
Query: 233 INYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQH 280
+++ + G P+ + C DP KRP+ + L+H
Sbjct: 230 MDFGL-NVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVK-LEH 275
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 109/210 (51%), Gaps = 19/210 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E +L ++G G FG VW + V AIK +K S E L+E + ++K+ H
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPE--AFLQEAQVMKKLRHEK 67
Query: 62 IVKLKEVIRENDILYFVFEYM-ECNLYQLMK-DREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ E I Y V EYM + +L +K + K ++ + Q+ G+AY+ +
Sbjct: 68 LVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 126
Query: 120 GYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVSTRW------YRAPEVLLQ 172
Y HRDL+ N+LV ++ + K+ADFGLAR I EY + + + APE L
Sbjct: 127 NYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAALY 182
Query: 173 SYLYSSKVDMWAMGAIMAELITL-RPLFPG 201
++ K D+W+ G ++ EL T R +PG
Sbjct: 183 GR-FTIKSDVWSFGILLTELTTKGRVPYPG 211
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 139/289 (48%), Gaps = 44/289 (15%)
Query: 1 MERYKLI--KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
MER + ++G G +G V+ + K+ VA+K +K+ EE L+E ++++
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 72
Query: 59 HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNW-CFQVFQGLAYM 116
HPN+V+L V Y + E+M NL +++ + A V + Q+ + Y+
Sbjct: 73 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQ 172
++ + HRDL N LV ++ +K+ADFGL+R + + +T + ++ + APE L
Sbjct: 133 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAY 191
Query: 173 SYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ +S K D+WA G ++ E+ T + P +PG + ++Y+ LL
Sbjct: 192 NK-FSIKSDVWAFGVLLWEIATYGMSP-YPGI-DLSQVYE-----------------LLE 231
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
+ +Y+ + G P V L+ + W+PS RP+ AE Q
Sbjct: 232 K--DYRMERPEGCPEKVY---------ELMRACWQWNPSDRPSFAEIHQ 269
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 109/210 (51%), Gaps = 19/210 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E +L ++G G FG VW + V AIK +K S E L+E + ++K+ H
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPE--AFLQEAQVMKKLRHEK 323
Query: 62 IVKLKEVIRENDILYFVFEYM-ECNLYQLMK-DREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ E I Y V EYM + +L +K + K ++ + Q+ G+AY+ +
Sbjct: 324 LVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 382
Query: 120 GYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVSTRWYR------APEVLLQ 172
Y HRDL+ N+LV ++ + K+ADFGLAR I EY + + + APE L
Sbjct: 383 NYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAALY 438
Query: 173 SYLYSSKVDMWAMGAIMAELITL-RPLFPG 201
++ K D+W+ G ++ EL T R +PG
Sbjct: 439 GR-FTIKSDVWSFGILLTELTTKGRVPYPG 467
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 141/302 (46%), Gaps = 52/302 (17%)
Query: 1 MERYKLI--KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
MER + ++G G +G V+ + K+ VA+K +K+ EE L+E ++++
Sbjct: 29 MERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 86
Query: 59 HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNW-CFQVFQGLAYM 116
HPN+V+L V Y V EYM NL +++ + A V + Q+ + Y+
Sbjct: 87 HPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYL 146
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQ 172
++ + HRDL N LV ++ +K+ADFGL+R + + +T + ++ + APE L
Sbjct: 147 EKKNFIHRDLAARNCLVGENHVVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAY 205
Query: 173 SYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ +S K D+WA G ++ E+ T + P +PG + ++Y LL
Sbjct: 206 N-TFSIKSDVWAFGVLLWEIATYGMSP-YPGI-DLSQVYD-----------------LLE 245
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPFSRVAF--M 288
+ Y+ Q G P V L+ + W P+ RP+ AE Q AF M
Sbjct: 246 KG--YRMEQPEGCPPKVY---------ELMRACWKWSPADRPSFAETHQ------AFETM 288
Query: 289 FH 290
FH
Sbjct: 289 FH 290
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 137/329 (41%), Gaps = 61/329 (18%)
Query: 3 RYKLIKEVGDGTFGSVWRAIS-KQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
RY+++ +G+G FG V I K G VA+K +K E + +V + PN
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPN 74
Query: 62 ----IVKLKEVIRENDILYFVFEYMECNLYQLMKDREKC-FSEAEVRNWCFQVFQGLAYM 116
V++ E + + VFE + + Y +K+ F +R +Q+ + + ++
Sbjct: 75 STFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFL 134
Query: 117 HQRGYFHRDLKPENLL-------------VSKD-------TIKIADFGLAREINSRPPFT 156
H H DLKPEN+L + +D IK+ DFG A + +
Sbjct: 135 HSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH--HS 192
Query: 157 EYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIG 216
V R YRAPEV+L + +S D+W++G I+ E +FP + + + ++G
Sbjct: 193 TLVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILG 251
Query: 217 TPTQD----------------SWAD----GLLLARAINYKFPQLVGVPLSVLMPSANKDA 256
+ W + G ++RA PL M S + +
Sbjct: 252 PLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACK---------PLKEFMLSQDVEH 302
Query: 257 ---VSLIASLCSWDPSKRPTAAEALQHPF 282
LI + +DP+KR T EAL+HPF
Sbjct: 303 ERLFDLIQKMLEYDPAKRITLREALKHPF 331
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 115/214 (53%), Gaps = 31/214 (14%)
Query: 2 ERY-KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSL 54
ER+ K ++++G G FGSV + + +GEVVA+KK++ +S EE + RE++ L
Sbjct: 12 ERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEIL 68
Query: 55 RKMSHPNIVKLKEVI----RENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQV 109
+ + H NIVK K V R N L + E++ +L + ++ ++ ++ + Q+
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRN--LKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQI 126
Query: 110 FQGLAYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTR------ 162
+G+ Y+ + Y HRDL N+LV +++ +KI DFGL + + P E +
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESP 183
Query: 163 --WYRAPEVLLQSYLYSSKVDMWAMGAIMAELIT 194
WY APE L +S +S D+W+ G ++ EL T
Sbjct: 184 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 215
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 139/289 (48%), Gaps = 44/289 (15%)
Query: 1 MERYKLI--KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
MER + ++G G +G V+ + K+ VA+K +K+ EE L+E ++++
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 67
Query: 59 HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNW-CFQVFQGLAYM 116
HPN+V+L V Y + E+M NL +++ + A V + Q+ + Y+
Sbjct: 68 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQ 172
++ + HRDL N LV ++ +K+ADFGL+R + + +T + ++ + APE L
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 173 SYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ +S K D+WA G ++ E+ T + P +PG + ++Y+ LL
Sbjct: 187 NK-FSIKSDVWAFGVLLWEIATYGMSP-YPGI-DLSQVYE-----------------LLE 226
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
+ +Y+ + G P V L+ + W+PS RP+ AE Q
Sbjct: 227 K--DYRMERPEGCPEKVY---------ELMRACWQWNPSDRPSFAEIHQ 264
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 109/210 (51%), Gaps = 19/210 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E +L ++G G FG VW + V AIK +K S E L+E + ++K+ H
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPE--AFLQEAQVMKKLRHEK 240
Query: 62 IVKLKEVIRENDILYFVFEYM-ECNLYQLMK-DREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ E I Y V EYM + +L +K + K ++ + Q+ G+AY+ +
Sbjct: 241 LVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 120 GYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVSTRW------YRAPEVLLQ 172
Y HRDL+ N+LV ++ + K+ADFGLAR I EY + + + APE L
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAALY 355
Query: 173 SYLYSSKVDMWAMGAIMAELITL-RPLFPG 201
++ K D+W+ G ++ EL T R +PG
Sbjct: 356 GR-FTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 102/198 (51%), Gaps = 18/198 (9%)
Query: 6 LIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
++E+G G FG V W K VAIK +++ S E+ + EV + K+SHP
Sbjct: 12 FVQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDFIEEAEV--MMKLSHPK 64
Query: 62 IVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
+V+L V E + V E+ME L ++ + F+ + C V +G+AY+ +
Sbjct: 65 LVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 124
Query: 121 YFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQSYLY 176
HRDL N LV ++ IK++DFG+ R + +T T++ + +PEV S Y
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSR-Y 182
Query: 177 SSKVDMWAMGAIMAELIT 194
SSK D+W+ G +M E+ +
Sbjct: 183 SSKSDVWSFGVLMWEVFS 200
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 109/210 (51%), Gaps = 19/210 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E +L ++G G FG VW + V AIK +K S E L+E + ++K+ H
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPE--AFLQEAQVMKKLRHEK 63
Query: 62 IVKLKEVIRENDILYFVFEYM-ECNLYQLMK-DREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ E I Y V EYM + +L +K + K ++ + Q+ G+AY+ +
Sbjct: 64 LVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 122
Query: 120 GYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVSTRW------YRAPEVLLQ 172
Y HRDL+ N+LV ++ + K+ADFGLAR I EY + + + APE L
Sbjct: 123 NYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAALY 178
Query: 173 SYLYSSKVDMWAMGAIMAELITL-RPLFPG 201
++ K D+W+ G ++ EL T R +PG
Sbjct: 179 GR-FTIKSDVWSFGILLTELTTKGRVPYPG 207
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 109/210 (51%), Gaps = 19/210 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E +L ++G G FG VW + V AIK +K S E L+E + ++K+ H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPE--AFLQEAQVMKKLRHEK 74
Query: 62 IVKLKEVIRENDILYFVFEYM-ECNLYQLMK-DREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ E I Y V EYM + +L +K + K ++ + Q+ G+AY+ +
Sbjct: 75 LVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 120 GYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVSTRW------YRAPEVLLQ 172
Y HRDL+ N+LV ++ + K+ADFGLAR I EY + + + APE L
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAALY 189
Query: 173 SYLYSSKVDMWAMGAIMAELITL-RPLFPG 201
++ K D+W+ G ++ EL T R +PG
Sbjct: 190 GR-FTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 109/210 (51%), Gaps = 19/210 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E +L ++G G FG VW + V AIK +K S E L+E + ++K+ H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPE--AFLQEAQVMKKLRHEK 74
Query: 62 IVKLKEVIRENDILYFVFEYM-ECNLYQLMK-DREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ E I Y V EYM + +L +K + K ++ + Q+ G+AY+ +
Sbjct: 75 LVQLYAVVSEEPI-YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 120 GYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVSTRW------YRAPEVLLQ 172
Y HRDL+ N+LV ++ + K+ADFGLAR I EY + + + APE L
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAALY 189
Query: 173 SYLYSSKVDMWAMGAIMAELITL-RPLFPG 201
++ K D+W+ G ++ EL T R +PG
Sbjct: 190 GR-FTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 139/289 (48%), Gaps = 44/289 (15%)
Query: 1 MERYKLI--KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
MER + ++G G +G V+ + K+ VA+K +K+ EE L+E ++++
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 67
Query: 59 HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNW-CFQVFQGLAYM 116
HPN+V+L V Y + E+M NL +++ + A V + Q+ + Y+
Sbjct: 68 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQ 172
++ + HRDL N LV ++ +K+ADFGL+R + + +T + ++ + APE L
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 173 SYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ +S K D+WA G ++ E+ T + P +PG + ++Y+ LL
Sbjct: 187 NK-FSIKSDVWAFGVLLWEIATYGMSP-YPGI-DLSQVYE-----------------LLE 226
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
+ +Y+ + G P V L+ + W+PS RP+ AE Q
Sbjct: 227 K--DYRMERPEGCPEKVY---------ELMRACWQWNPSDRPSFAEIHQ 264
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 116/240 (48%), Gaps = 35/240 (14%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
++ I+ +G G FG V+ A +K AIK+++ +REVK+L K+ HP IV
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 64 K---------LKEVIRENDILYFVFEYMECNLYQLMKD--REKCFSEAEVRNWCFQVF-- 110
+ E ++ + +++ M+ + +KD +C E R+ C +F
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126
Query: 111 --QGLAYMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREINSR----------PPF-- 155
+ + ++H +G HRDLKP N+ + D +K+ DFGL ++ P +
Sbjct: 127 IAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYAR 186
Query: 156 -TEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSV 214
T V T+ Y +PE + YS KVD++++G I+ EL L+P +++ + + + V
Sbjct: 187 HTGQVGTKLYMSPE-QIHGNSYSHKVDIFSLGLILFEL-----LYPFSTQMERVRTLTDV 240
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 109/210 (51%), Gaps = 19/210 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E +L ++G G FG VW + V AIK +K S E L+E + ++K+ H
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPE--AFLQEAQVMKKLRHEK 71
Query: 62 IVKLKEVIRENDILYFVFEYM-ECNLYQLMK-DREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ E I Y V EYM + +L +K + K ++ + Q+ G+AY+ +
Sbjct: 72 LVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 120 GYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVSTRW------YRAPEVLLQ 172
Y HRDL+ N+LV ++ + K+ADFGLAR I EY + + + APE L
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAALY 186
Query: 173 SYLYSSKVDMWAMGAIMAELITL-RPLFPG 201
++ K D+W+ G ++ EL T R +PG
Sbjct: 187 GR-FTIKSDVWSFGILLTELTTKGRVPYPG 215
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 15/204 (7%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEEC---------VNLREVK 52
++Y + +G G FG VW A+ K+ + V +K +KK+ E+C V L E+
Sbjct: 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKV-LEDCWIEDPKLGKVTL-EIA 81
Query: 53 SLRKMSHPNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVF 110
L ++ H NI+K+ ++ V E +L+ + DR E Q+
Sbjct: 82 ILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFI-DRHPRLDEPLASYIFRQLV 140
Query: 111 QGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV 169
+ Y+ + HRD+K EN+++++D TIK+ DFG A + F + T Y APEV
Sbjct: 141 SAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEV 200
Query: 170 LLQSYLYSSKVDMWAMGAIMAELI 193
L+ + +++MW++G + L+
Sbjct: 201 LMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 116/222 (52%), Gaps = 23/222 (10%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E KL++ +G G FG VW +V A+K +K+ S + L E ++++ H
Sbjct: 9 ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDAF--LAEANLMKQLQHQR 65
Query: 62 IVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKC-FSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ + I Y + EYME +L +K + ++ + Q+ +G+A++ +R
Sbjct: 66 LVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 124
Query: 120 GYFHRDLKPENLLVSKDTI--KIADFGLAREINSRPPFTEYVS-------TRWYRAPEVL 170
Y HR+L+ N+LVS DT+ KIADFGLAR I EY + +W APE
Sbjct: 125 NYIHRNLRAANILVS-DTLSCKIADFGLARLIED----NEYTAREGAKFPIKW-TAPEA- 177
Query: 171 LQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ ++ K D+W+ G ++ E++T R +PG + + I +
Sbjct: 178 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 219
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 109/210 (51%), Gaps = 19/210 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E +L ++G G FG VW + V AIK +K S E L+E + ++K+ H
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPE--AFLQEAQVMKKLRHEK 240
Query: 62 IVKLKEVIRENDILYFVFEYM-ECNLYQLMK-DREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ E I Y V EYM + +L +K + K ++ + Q+ G+AY+ +
Sbjct: 241 LVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 120 GYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVSTRW------YRAPEVLLQ 172
Y HRDL+ N+LV ++ + K+ADFGLAR I EY + + + APE L
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAALY 355
Query: 173 SYLYSSKVDMWAMGAIMAELITL-RPLFPG 201
++ K D+W+ G ++ EL T R +PG
Sbjct: 356 GR-FTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 109/210 (51%), Gaps = 19/210 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E +L ++G G FG VW + V AIK +K S E L+E + ++K+ H
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPE--AFLQEAQVMKKLRHEK 240
Query: 62 IVKLKEVIRENDILYFVFEYM-ECNLYQLMK-DREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ E I Y V EYM + +L +K + K ++ + Q+ G+AY+ +
Sbjct: 241 LVQLYAVVSEEPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 120 GYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVSTRW------YRAPEVLLQ 172
Y HRDL+ N+LV ++ + K+ADFGLAR I EY + + + APE L
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAALY 355
Query: 173 SYLYSSKVDMWAMGAIMAELITL-RPLFPG 201
++ K D+W+ G ++ EL T R +PG
Sbjct: 356 GR-FTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 114/218 (52%), Gaps = 15/218 (6%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E KL++ +G G FG VW +V A+K +K+ S + L E ++++ H
Sbjct: 15 ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDAF--LAEANLMKQLQHQR 71
Query: 62 IVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKC-FSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ + I Y + EYME +L +K + ++ + Q+ +G+A++ +R
Sbjct: 72 LVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 130
Query: 120 GYFHRDLKPENLLVSKDTI--KIADFGLAREINSRPPFTEYVS---TRWYRAPEVLLQSY 174
Y HRDL+ N+LVS DT+ KIADFGLAR I + +W APE +
Sbjct: 131 NYIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TAPEA-INYG 187
Query: 175 LYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
++ K D+W+ G ++ E++T R +PG + + I +
Sbjct: 188 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 225
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 130/289 (44%), Gaps = 37/289 (12%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWE--ECVNLREVKSLRKMS 58
++ +++ + +G G FG+V+ A K+S +VA+K + K E E RE++ +
Sbjct: 22 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 59 HPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMH 117
HPNI++L + +Y + EY LY+ ++ + F E ++ L Y H
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQ-KSCTFDEQRTATIMEELADALMYCH 140
Query: 118 QRGYFHRDLKPENLLVSKDTIK-IADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+KPENLL+ IADFG + S T T Y PE +++ ++
Sbjct: 141 GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKT-MCGTLDYLPPE-MIEGRMH 198
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
+ KVD+W +G + EL+ P F S + +I V + K
Sbjct: 199 NEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV-------------------DLK 239
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPFSRV 285
FP V P+ +D LI+ L +PS+R A+ HP+ R
Sbjct: 240 FPASV--------PTGAQD---LISKLLRHNPSERLPLAQVSAHPWVRA 277
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 109/210 (51%), Gaps = 19/210 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E +L ++G G FG VW + V AIK +K S E L+E + ++K+ H
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPE--AFLQEAQVMKKLRHEK 65
Query: 62 IVKLKEVIRENDILYFVFEYM-ECNLYQLMK-DREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ E I Y V EYM + +L +K + K ++ + Q+ G+AY+ +
Sbjct: 66 LVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 124
Query: 120 GYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVSTRW------YRAPEVLLQ 172
Y HRDL+ N+LV ++ + K+ADFGLAR I EY + + + APE L
Sbjct: 125 NYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAALY 180
Query: 173 SYLYSSKVDMWAMGAIMAELITL-RPLFPG 201
++ K D+W+ G ++ EL T R +PG
Sbjct: 181 GR-FTIKSDVWSFGILLTELTTKGRVPYPG 209
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 109/210 (51%), Gaps = 19/210 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E +L ++G G FG VW + V AIK +K S E L+E + ++K+ H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPE--AFLQEAQVMKKIRHEK 74
Query: 62 IVKLKEVIRENDILYFVFEYM-ECNLYQLMK-DREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ E I Y V EYM + +L +K + K ++ + Q+ G+AY+ +
Sbjct: 75 LVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 120 GYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVSTRW------YRAPEVLLQ 172
Y HRDL+ N+LV ++ + K+ADFGLAR I EY + + + APE L
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAALY 189
Query: 173 SYLYSSKVDMWAMGAIMAELITL-RPLFPG 201
++ K D+W+ G ++ EL T R +PG
Sbjct: 190 GR-FTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 114/218 (52%), Gaps = 15/218 (6%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E KL++ +G G FG VW +V A+K +K+ S + L E ++++ H
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDAF--LAEANLMKQLQHQR 69
Query: 62 IVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKC-FSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ + I Y + EYME +L +K + ++ + Q+ +G+A++ +R
Sbjct: 70 LVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 120 GYFHRDLKPENLLVSKDTI--KIADFGLAREINSRPPFTEYVS---TRWYRAPEVLLQSY 174
Y HRDL+ N+LVS DT+ KIADFGLAR I + +W APE +
Sbjct: 129 NYIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TAPEA-INYG 185
Query: 175 LYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
++ K D+W+ G ++ E++T R +PG + + I +
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 139/289 (48%), Gaps = 44/289 (15%)
Query: 1 MERYKLI--KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
MER + ++G G +G V+ + K+ VA+K +K+ EE L+E ++++
Sbjct: 23 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 80
Query: 59 HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNW-CFQVFQGLAYM 116
HPN+V+L V Y + E+M NL +++ + A V + Q+ + Y+
Sbjct: 81 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 140
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQ 172
++ + HRDL N LV ++ +K+ADFGL+R + + +T + ++ + APE L
Sbjct: 141 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAY 199
Query: 173 SYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ +S K D+WA G ++ E+ T + P +PG + ++Y+ LL
Sbjct: 200 N-KFSIKSDVWAFGVLLWEIATYGMSP-YPGI-DLSQVYE-----------------LLE 239
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
+ +Y+ + G P V L+ + W+PS RP+ AE Q
Sbjct: 240 K--DYRMERPEGCPEKVY---------ELMRACWQWNPSDRPSFAEIHQ 277
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 139/289 (48%), Gaps = 44/289 (15%)
Query: 1 MERYKLI--KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
MER + ++G G +G V+ + K+ VA+K +K+ EE L+E ++++
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 67
Query: 59 HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNW-CFQVFQGLAYM 116
HPN+V+L V Y + E+M NL +++ + A V + Q+ + Y+
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQ 172
++ + HRDL N LV ++ +K+ADFGL+R + + +T + ++ + APE L
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 173 SYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ +S K D+WA G ++ E+ T + P +PG + ++Y+ LL
Sbjct: 187 N-KFSIKSDVWAFGVLLWEIATYGMSP-YPGI-DLSQVYE-----------------LLE 226
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
+ +Y+ + G P V L+ + W+PS RP+ AE Q
Sbjct: 227 K--DYRMERPEGCPEKVY---------ELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 113/214 (52%), Gaps = 31/214 (14%)
Query: 2 ERY-KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSL 54
ER+ K ++++G G FGSV + + +GEVVA+KK++ +S EE + RE++ L
Sbjct: 12 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEIL 68
Query: 55 RKMSHPNIVKLKEVI----RENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQV 109
+ + H NIVK K V R N L + EY+ +L ++ + ++ + Q+
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQI 126
Query: 110 FQGLAYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTR------ 162
+G+ Y+ + Y HRDL N+LV +++ +KI DFGL + + P E +
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESP 183
Query: 163 --WYRAPEVLLQSYLYSSKVDMWAMGAIMAELIT 194
WY APE L +S +S D+W+ G ++ EL T
Sbjct: 184 IFWY-APESLTESK-FSVASDVWSFGVVLYELFT 215
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 114/218 (52%), Gaps = 15/218 (6%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E KL++ +G G FG VW +V A+K +K+ S + L E ++++ H
Sbjct: 14 ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDAF--LAEANLMKQLQHQR 70
Query: 62 IVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKC-FSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ + I Y + EYME +L +K + ++ + Q+ +G+A++ +R
Sbjct: 71 LVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 129
Query: 120 GYFHRDLKPENLLVSKDTI--KIADFGLAREINSRPPFTEYVS---TRWYRAPEVLLQSY 174
Y HRDL+ N+LVS DT+ KIADFGLAR I + +W APE +
Sbjct: 130 NYIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TAPEA-INYG 186
Query: 175 LYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
++ K D+W+ G ++ E++T R +PG + + I +
Sbjct: 187 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 224
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 139/289 (48%), Gaps = 44/289 (15%)
Query: 1 MERYKLI--KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
MER + ++G G +G V+ + K+ VA+K +K+ EE L+E ++++
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 72
Query: 59 HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNW-CFQVFQGLAYM 116
HPN+V+L V Y + E+M NL +++ + A V + Q+ + Y+
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 132
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQ 172
++ + HRDL N LV ++ +K+ADFGL+R + + +T + ++ + APE L
Sbjct: 133 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAY 191
Query: 173 SYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ +S K D+WA G ++ E+ T + P +PG + ++Y+ LL
Sbjct: 192 NK-FSIKSDVWAFGVLLWEIATYGMSP-YPGI-DLSQVYE-----------------LLE 231
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
+ +Y+ + G P V L+ + W+PS RP+ AE Q
Sbjct: 232 K--DYRMERPEGCPEKVY---------ELMRACWQWNPSDRPSFAEIHQ 269
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 139/289 (48%), Gaps = 44/289 (15%)
Query: 1 MERYKLI--KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
MER + ++G G +G V+ + K+ VA+K +K+ EE L+E ++++
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 72
Query: 59 HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNW-CFQVFQGLAYM 116
HPN+V+L V Y + E+M NL +++ + A V + Q+ + Y+
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQ 172
++ + HRDL N LV ++ +K+ADFGL+R + + +T + ++ + APE L
Sbjct: 133 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAY 191
Query: 173 SYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ +S K D+WA G ++ E+ T + P +PG + ++Y+ LL
Sbjct: 192 N-KFSIKSDVWAFGVLLWEIATYGMSP-YPGI-DLSQVYE-----------------LLE 231
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
+ +Y+ + G P V L+ + W+PS RP+ AE Q
Sbjct: 232 K--DYRMERPEGCPEKVY---------ELMRACWQWNPSDRPSFAEIHQ 269
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 114/218 (52%), Gaps = 15/218 (6%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E KL++ +G G FG VW +V A+K +K+ S + L E ++++ H
Sbjct: 22 ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDAF--LAEANLMKQLQHQR 78
Query: 62 IVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKC-FSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ + I Y + EYME +L +K + ++ + Q+ +G+A++ +R
Sbjct: 79 LVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 137
Query: 120 GYFHRDLKPENLLVSKDTI--KIADFGLAREINSRPPFTEYVS---TRWYRAPEVLLQSY 174
Y HRDL+ N+LVS DT+ KIADFGLAR I + +W APE +
Sbjct: 138 NYIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TAPEA-INYG 194
Query: 175 LYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
++ K D+W+ G ++ E++T R +PG + + I +
Sbjct: 195 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 232
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 139/289 (48%), Gaps = 44/289 (15%)
Query: 1 MERYKLI--KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
MER + ++G G +G V+ + K+ VA+K +K+ EE L+E ++++
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 72
Query: 59 HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNW-CFQVFQGLAYM 116
HPN+V+L V Y + E+M NL +++ + A V + Q+ + Y+
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQ 172
++ + HRDL N LV ++ +K+ADFGL+R + + +T + ++ + APE L
Sbjct: 133 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAY 191
Query: 173 SYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ +S K D+WA G ++ E+ T + P +PG + ++Y+ LL
Sbjct: 192 NK-FSIKSDVWAFGVLLWEIATYGMSP-YPGI-DLSQVYE-----------------LLE 231
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
+ +Y+ + G P V L+ + W+PS RP+ AE Q
Sbjct: 232 K--DYRMERPEGCPEKVY---------ELMRACWQWNPSDRPSFAEIHQ 269
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 139/289 (48%), Gaps = 44/289 (15%)
Query: 1 MERYKLI--KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
MER + ++G G +G V+ + K+ VA+K +K+ EE L+E ++++
Sbjct: 14 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 71
Query: 59 HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNW-CFQVFQGLAYM 116
HPN+V+L V Y + E+M NL +++ + A V + Q+ + Y+
Sbjct: 72 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 131
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQ 172
++ + HRDL N LV ++ +K+ADFGL+R + + +T + ++ + APE L
Sbjct: 132 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAY 190
Query: 173 SYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ +S K D+WA G ++ E+ T + P +PG + ++Y+ LL
Sbjct: 191 NK-FSIKSDVWAFGVLLWEIATYGMSP-YPGI-DLSQVYE-----------------LLE 230
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
+ +Y+ + G P V L+ + W+PS RP+ AE Q
Sbjct: 231 K--DYRMERPEGCPEKVY---------ELMRACWQWNPSDRPSFAEIHQ 268
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 139/289 (48%), Gaps = 44/289 (15%)
Query: 1 MERYKLI--KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
MER + ++G G +G V+ + K+ VA+K +K+ EE L+E ++++
Sbjct: 12 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 69
Query: 59 HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNW-CFQVFQGLAYM 116
HPN+V+L V Y + E+M NL +++ + A V + Q+ + Y+
Sbjct: 70 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQ 172
++ + HRDL N LV ++ +K+ADFGL+R + + +T + ++ + APE L
Sbjct: 130 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAY 188
Query: 173 SYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ +S K D+WA G ++ E+ T + P +PG + ++Y+ LL
Sbjct: 189 NK-FSIKSDVWAFGVLLWEIATYGMSP-YPGI-DLSQVYE-----------------LLE 228
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
+ +Y+ + G P V L+ + W+PS RP+ AE Q
Sbjct: 229 K--DYRMERPEGCPEKVY---------ELMRACWQWNPSDRPSFAEIHQ 266
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 107/207 (51%), Gaps = 13/207 (6%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E +L ++G G FG VW + V AIK +K S E L+E + ++K+ H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPE--AFLQEAQVMKKLRHEK 74
Query: 62 IVKLKEVIRENDILYFVFEYM-ECNLYQLMK-DREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ E I Y V EYM + +L +K + K ++ + Q+ G+AY+ +
Sbjct: 75 LVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 120 GYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVS---TRWYRAPEVLLQSYL 175
Y HRDL+ N+LV ++ + K+ADFGLAR I + +W APE L
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW-TAPEAALYGR- 191
Query: 176 YSSKVDMWAMGAIMAELITL-RPLFPG 201
++ K D+W+ G ++ EL T R +PG
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 139/289 (48%), Gaps = 44/289 (15%)
Query: 1 MERYKLI--KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
MER + ++G G +G V+ + K+ VA+K +K+ EE L+E ++++
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 67
Query: 59 HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNW-CFQVFQGLAYM 116
HPN+V+L V Y + E+M NL +++ + A V + Q+ + Y+
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQ 172
++ + HRDL N LV ++ +K+ADFGL+R + + +T + ++ + APE L
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 173 SYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ +S K D+WA G ++ E+ T + P +PG + ++Y+ LL
Sbjct: 187 N-KFSIKSDVWAFGVLLWEIATYGMSP-YPGI-DLSQVYE-----------------LLE 226
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
+ +Y+ + G P V L+ + W+PS RP+ AE Q
Sbjct: 227 K--DYRMERPEGCPEKVY---------ELMRACWQWNPSDRPSFAEIHQ 264
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 139/289 (48%), Gaps = 44/289 (15%)
Query: 1 MERYKLI--KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
MER + ++G G +G V+ + K+ VA+K +K+ EE L+E ++++
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 67
Query: 59 HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNW-CFQVFQGLAYM 116
HPN+V+L V Y + E+M NL +++ + A V + Q+ + Y+
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQ 172
++ + HRDL N LV ++ +K+ADFGL+R + + +T + ++ + APE L
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 173 SYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ +S K D+WA G ++ E+ T + P +PG + ++Y+ LL
Sbjct: 187 NK-FSIKSDVWAFGVLLWEIATYGMSP-YPGI-DLSQVYE-----------------LLE 226
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
+ +Y+ + G P V L+ + W+PS RP+ AE Q
Sbjct: 227 K--DYRMERPEGCPEKVY---------ELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 139/289 (48%), Gaps = 44/289 (15%)
Query: 1 MERYKLI--KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
MER + ++G G +G V+ + K+ VA+K +K+ EE L+E ++++
Sbjct: 12 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 69
Query: 59 HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNW-CFQVFQGLAYM 116
HPN+V+L V Y + E+M NL +++ + A V + Q+ + Y+
Sbjct: 70 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQ 172
++ + HRDL N LV ++ +K+ADFGL+R + + +T + ++ + APE L
Sbjct: 130 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAY 188
Query: 173 SYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ +S K D+WA G ++ E+ T + P +PG + ++Y+ LL
Sbjct: 189 NK-FSIKSDVWAFGVLLWEIATYGMSP-YPGI-DLSQVYE-----------------LLE 228
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
+ +Y+ + G P V L+ + W+PS RP+ AE Q
Sbjct: 229 K--DYRMERPEGCPEKVY---------ELMRACWQWNPSDRPSFAEIHQ 266
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 114/218 (52%), Gaps = 15/218 (6%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E KL++ +G G FG VW +V A+K +K+ S + L E ++++ H
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDAF--LAEANLMKQLQHQR 75
Query: 62 IVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKC-FSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ + I Y + EYME +L +K + ++ + Q+ +G+A++ +R
Sbjct: 76 LVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 120 GYFHRDLKPENLLVSKDTI--KIADFGLAREINSRPPFTEYVST---RWYRAPEVLLQSY 174
Y HRDL+ N+LVS DT+ KIADFGLAR I + +W APE +
Sbjct: 135 NYIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TAPEA-INYG 191
Query: 175 LYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
++ K D+W+ G ++ E++T R +PG + + I +
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 229
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 131/295 (44%), Gaps = 43/295 (14%)
Query: 1 MERYKLIKEV-GDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSL--RKM 57
++ YK+ +V G G G V + +K++ E A+K + ++C R L R
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 66
Query: 58 SHPNIVKLKEVIRE----NDILYFVFEYMECN-LYQLMKDR-EKCFSEAEVRNWCFQVFQ 111
P+IV++ +V L V E ++ L+ ++DR ++ F+E E + +
Sbjct: 67 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 126
Query: 112 GLAYMHQRGYFHRDLKPENLLVSKD----TIKIADFGLAREINSRPPFTEYVSTRWYRAP 167
+ Y+H HRD+KPENLL + +K+ DFG A+E S TE T +Y AP
Sbjct: 127 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAP 186
Query: 168 EVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGL 227
EVL Y DMW++G IM L+ P F Y + +P +
Sbjct: 187 EVLGPEK-YDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT----- 231
Query: 228 LLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
R Y+FP +S ++ LI +L +P++R T E + HP+
Sbjct: 232 -RIRMGQYEFPNPEWSEVS-------EEVKMLIRNLLKTEPTQRMTITEFMNHPW 278
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 114/218 (52%), Gaps = 15/218 (6%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E KL++ +G G FG VW +V A+K +K+ S + L E ++++ H
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDAF--LAEANLMKQLQHQR 69
Query: 62 IVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKC-FSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ + I Y + EYME +L +K + ++ + Q+ +G+A++ +R
Sbjct: 70 LVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 120 GYFHRDLKPENLLVSKDTI--KIADFGLAREINSRPPFTEYVS---TRWYRAPEVLLQSY 174
Y HRDL+ N+LVS DT+ KIADFGLAR I + +W APE +
Sbjct: 129 NYIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TAPEA-INYG 185
Query: 175 LYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
++ K D+W+ G ++ E++T R +PG + + I +
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 139/289 (48%), Gaps = 44/289 (15%)
Query: 1 MERYKLI--KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
MER + ++G G +G V+ + K+ VA+K +K+ EE L+E ++++
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 67
Query: 59 HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNW-CFQVFQGLAYM 116
HPN+V+L V Y + E+M NL +++ + A V + Q+ + Y+
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQ 172
++ + HRDL N LV ++ +K+ADFGL+R + + +T + ++ + APE L
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 173 SYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ +S K D+WA G ++ E+ T + P +PG + ++Y+ LL
Sbjct: 187 NK-FSIKSDVWAFGVLLWEIATYGMSP-YPGI-DLSQVYE-----------------LLE 226
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
+ +Y+ + G P V L+ + W+PS RP+ AE Q
Sbjct: 227 K--DYRMERPEGCPEKVY---------ELMRACWQWNPSDRPSFAEIHQ 264
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 114/218 (52%), Gaps = 15/218 (6%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E KL++ +G G FG VW +V A+K +K+ S + L E ++++ H
Sbjct: 21 ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDAF--LAEANLMKQLQHQR 77
Query: 62 IVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKC-FSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ + I Y + EYME +L +K + ++ + Q+ +G+A++ +R
Sbjct: 78 LVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 136
Query: 120 GYFHRDLKPENLLVSKDTI--KIADFGLAREINSRPPFTEYVST---RWYRAPEVLLQSY 174
Y HRDL+ N+LVS DT+ KIADFGLAR I + +W APE +
Sbjct: 137 NYIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TAPEA-INYG 193
Query: 175 LYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
++ K D+W+ G ++ E++T R +PG + + I +
Sbjct: 194 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 231
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 105/209 (50%), Gaps = 22/209 (10%)
Query: 2 ERY-KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRK 56
+RY K I+++G+G FG V + + +GE+VA+K +K+ RE++ LR
Sbjct: 8 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRT 67
Query: 57 MSHPNIVKLKEVIREND--ILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
+ H +IVK K + + V EY+ + R C A++ + Q+ +G+A
Sbjct: 68 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH-CVGLAQLLLFAQQICEGMA 126
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTR--------WYR 165
Y+H + Y HR L N+L+ D +KI DFGLA+ + P EY R WY
Sbjct: 127 YLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAV---PEGHEYYRVREDGDSPVFWY- 182
Query: 166 APEVLLQSYLYSSKVDMWAMGAIMAELIT 194
APE L + Y + D+W+ G + EL+T
Sbjct: 183 APECLKECKFYYAS-DVWSFGVTLYELLT 210
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 138/289 (47%), Gaps = 44/289 (15%)
Query: 1 MERYKLI--KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
MER + ++G G FG V+ + K+ VA+K +K+ EE L+E ++++
Sbjct: 8 MERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 65
Query: 59 HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNW-CFQVFQGLAYM 116
HPN+V+L V Y + E+M NL +++ + A V + Q+ + Y+
Sbjct: 66 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQ 172
++ + HRDL N LV ++ +K+ADFGL+R + + T + ++ + APE L
Sbjct: 126 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAY 184
Query: 173 SYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ +S K D+WA G ++ E+ T + P +PG + ++Y+ LL
Sbjct: 185 NK-FSIKSDVWAFGVLLWEIATYGMSP-YPGI-DPSQVYE-----------------LLE 224
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
+ +Y+ + G P V L+ + W+PS RP+ AE Q
Sbjct: 225 K--DYRMERPEGCPEKVY---------ELMRACWQWNPSDRPSFAEIHQ 262
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 105/209 (50%), Gaps = 22/209 (10%)
Query: 2 ERY-KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRK 56
+RY K I+++G+G FG V + + +GE+VA+K +K+ RE++ LR
Sbjct: 7 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRT 66
Query: 57 MSHPNIVKLKEVIREND--ILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
+ H +IVK K + + V EY+ + R C A++ + Q+ +G+A
Sbjct: 67 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH-CVGLAQLLLFAQQICEGMA 125
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTR--------WYR 165
Y+H + Y HR L N+L+ D +KI DFGLA+ + P EY R WY
Sbjct: 126 YLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAV---PEGHEYYRVREDGDSPVFWY- 181
Query: 166 APEVLLQSYLYSSKVDMWAMGAIMAELIT 194
APE L + Y + D+W+ G + EL+T
Sbjct: 182 APECLKECKFYYAS-DVWSFGVTLYELLT 209
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 108/210 (51%), Gaps = 19/210 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E +L ++G G FG VW + V AIK +K S E L+E + ++K+ H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPE--AFLQEAQVMKKLRHEK 74
Query: 62 IVKLKEVIRENDILYFVFEYM-ECNLYQLMK-DREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ E I Y V EYM + +L +K + K ++ + Q+ G+AY+ +
Sbjct: 75 LVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 120 GYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVSTRW------YRAPEVLLQ 172
Y HRDL N+LV ++ + K+ADFGLAR I EY + + + APE L
Sbjct: 134 NYVHRDLAAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAALY 189
Query: 173 SYLYSSKVDMWAMGAIMAELITL-RPLFPG 201
++ K D+W+ G ++ EL T R +PG
Sbjct: 190 GR-FTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 125/284 (44%), Gaps = 35/284 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E + + +G G+FG V++ I + EVVAIK + + E +E+ L + P
Sbjct: 19 ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 78
Query: 62 IVKLKEVIRENDILYFVFEYM-ECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
I + ++ L+ + EY+ + L+K E + ++ +GL Y+H
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALDLLK--PGPLEETYIATILREILKGLDYLHSER 136
Query: 121 YFHRDLKPENLLVS-KDTIKIADFGLAREI-NSRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
HRD+K N+L+S + +K+ADFG+A ++ +++ +V T ++ APEV+ QS Y
Sbjct: 137 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS-AYDF 195
Query: 179 KVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFP 238
K D+W++G EL P P D +L N P
Sbjct: 196 KADIWSLGITAIELAKGEP--------------------PNSDLHPMRVLFLIPKNSP-P 234
Query: 239 QLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
L G +K + + + DP RPTA E L+H F
Sbjct: 235 TLEG--------QHSKPFKEFVEACLNKDPRFRPTAKELLKHKF 270
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 112/201 (55%), Gaps = 16/201 (7%)
Query: 7 IKE-VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSHPNIV 63
IKE +G G+FG+V RA + G VA+K + ++ + E VN LREV ++++ HPNIV
Sbjct: 41 IKEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAER-VNEFLREVAIMKRLRHPNIV 97
Query: 64 KLKEVIRENDILYFVFEYM-ECNLYQLMKD---REKCFSEAEVRNWCFQVFQGLAYMHQR 119
+ + L V EY+ +LY+L+ RE+ E + + V +G+ Y+H R
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ-LDERRRLSMAYDVAKGMNYLHNR 156
Query: 120 G--YFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVS-TRWYRAPEVLLQSYL 175
HRDLK NLLV K T+K+ DFGL+R S ++ + T + APEV L+
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEV-LRDEP 215
Query: 176 YSSKVDMWAMGAIMAELITLR 196
+ K D+++ G I+ EL TL+
Sbjct: 216 SNEKSDVYSFGVILWELATLQ 236
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 138/289 (47%), Gaps = 44/289 (15%)
Query: 1 MERYKLI--KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
MER + ++G G +G V+ + K+ VA+K +K+ EE L+E ++++
Sbjct: 8 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 65
Query: 59 HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNW-CFQVFQGLAYM 116
HPN+V+L V Y + E+M NL +++ + A V + Q+ + Y+
Sbjct: 66 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQ 172
++ + HRDL N LV ++ +K+ADFGL+R + + T + ++ + APE L
Sbjct: 126 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAY 184
Query: 173 SYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ +S K D+WA G ++ E+ T + P +PG + ++Y+ LL
Sbjct: 185 NK-FSIKSDVWAFGVLLWEIATYGMSP-YPGI-DPSQVYE-----------------LLE 224
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
+ +Y+ + G P V L+ + W+PS RP+ AE Q
Sbjct: 225 K--DYRMERPEGCPEKVY---------ELMRACWQWNPSDRPSFAEIHQ 262
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 25/232 (10%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVI 69
+G G +V+R K++G++ AIK + V +RE + L+K++H NIVKL +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 70 RENDILY--FVFEYMEC-NLYQLMKDREKCFS--EAEVRNWCFQVFQGLAYMHQRGYFHR 124
E + + E+ C +LY ++++ + E+E V G+ ++ + G HR
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHR 136
Query: 125 DLKPENLL--VSKD---TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL---- 175
++KP N++ + +D K+ DFG ARE+ F T Y P++ ++ L
Sbjct: 137 NIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDH 196
Query: 176 ---YSSKVDMWAMGAIMAELIT----LRPLFPGTSEADEI-YKICSVIGTPT 219
Y + VD+W++G T RP F G E+ YKI + G P+
Sbjct: 197 QKKYGATVDLWSIGVTFYHAATGSLPFRP-FEGPRRNKEVMYKI--ITGKPS 245
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 149/336 (44%), Gaps = 49/336 (14%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
RY L++++G G F +VW A + VA+K ++ E + E+K L++++ +
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAED--EIKLLQRVNDADN 77
Query: 63 VKLKEVIRENDIL----------------YFVFEYMECNLYQLMKDRE-KCFSEAEVRNW 105
K ++ + N IL VFE + NL L+K E + V+
Sbjct: 78 TK-EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQI 136
Query: 106 CFQVFQGLAYMHQR-GYFHRDLKPENLLVS-KDT------IKIADFGLAREINSRPPFTE 157
Q+ GL YMH+R G H D+KPEN+L+ D+ IKIAD G A + +T
Sbjct: 137 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH--YTN 194
Query: 158 YVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPG------TSEADEIYKI 211
+ TR YR+PEVLL + + D+W+ ++ ELIT LF T + D I +I
Sbjct: 195 SIQTREYRSPEVLLGA-PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 253
Query: 212 CSVIGT-PT----QDSWADGLLLARAINYKFPQLVGVPLSVLMPSA---NKDAVSLIASL 263
++G P+ + +R + +L PL ++ +KD I+
Sbjct: 254 IELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDF 313
Query: 264 CS----WDPSKRPTAAEALQHPFSRVAFMFHHLSVP 295
S DP KR A + HP+ + + VP
Sbjct: 314 LSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVP 349
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 111/217 (51%), Gaps = 24/217 (11%)
Query: 6 LIKEVGDGTFGSVWRAISKQSGEV-VAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVK 64
+KE+G G FG V K G+ VAIK +K+ S +E + E K + +SH +V+
Sbjct: 13 FLKELGTGQFGVV--KYGKWRGQYDVAIKMIKEGSMSEDEFIE--EAKVMMNLSHEKLVQ 68
Query: 65 LKEVIRENDILYFVFEYME--CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYF 122
L V + ++ + EYM C L L + R + F ++ C V + + Y+ + +
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL 127
Query: 123 HRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTEYVSTRW------YRAPEVLLQSYL 175
HRDL N LV+ + +K++DFGL+R + EY S+R + PEVL+ S
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLD----DEYTSSRGSKFPVRWSPPEVLMYSK- 182
Query: 176 YSSKVDMWAMGAIMAELITLRPL----FPGTSEADEI 208
+SSK D+WA G +M E+ +L + F + A+ I
Sbjct: 183 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 219
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 149/336 (44%), Gaps = 49/336 (14%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
RY L++++G G F +VW A + VA+K ++ E + E+K L++++ +
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAED--EIKLLQRVNDADN 77
Query: 63 VKLKEVIRENDIL----------------YFVFEYMECNLYQLMKDRE-KCFSEAEVRNW 105
K ++ + N IL VFE + NL L+K E + V+
Sbjct: 78 TK-EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQI 136
Query: 106 CFQVFQGLAYMHQR-GYFHRDLKPENLLVS-KDT------IKIADFGLAREINSRPPFTE 157
Q+ GL YMH+R G H D+KPEN+L+ D+ IKIAD G A + +T
Sbjct: 137 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH--YTN 194
Query: 158 YVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPG------TSEADEIYKI 211
+ TR YR+PEVLL + + D+W+ ++ ELIT LF T + D I +I
Sbjct: 195 SIQTREYRSPEVLLGA-PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 253
Query: 212 CSVIGT-PT----QDSWADGLLLARAINYKFPQLVGVPLSVLMPSA---NKDAVSLIASL 263
++G P+ + +R + +L PL ++ +KD I+
Sbjct: 254 IELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDF 313
Query: 264 CS----WDPSKRPTAAEALQHPFSRVAFMFHHLSVP 295
S DP KR A + HP+ + + VP
Sbjct: 314 LSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVP 349
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 138/289 (47%), Gaps = 44/289 (15%)
Query: 1 MERYKLI--KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
MER + ++G G +G V+ + K+ VA+K +K+ EE L+E ++++
Sbjct: 11 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 68
Query: 59 HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNW-CFQVFQGLAYM 116
HPN+V+L V Y + E+M NL +++ + A V + Q+ + Y+
Sbjct: 69 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQ 172
++ + HRDL N LV ++ +K+ADFGL+R + + T + ++ + APE L
Sbjct: 129 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAY 187
Query: 173 SYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ +S K D+WA G ++ E+ T + P +PG + ++Y+ LL
Sbjct: 188 NK-FSIKSDVWAFGVLLWEIATYGMSP-YPGI-DLSQVYE-----------------LLE 227
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
+ +Y+ + G P V L+ + W+PS RP+ AE Q
Sbjct: 228 K--DYRMERPEGCPEKVY---------ELMRACWQWNPSDRPSFAEIHQ 265
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 25/232 (10%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVI 69
+G G +V+R K++G++ AIK + V +RE + L+K++H NIVKL +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 70 RENDILY--FVFEYMEC-NLYQLMKDREKCFS--EAEVRNWCFQVFQGLAYMHQRGYFHR 124
E + + E+ C +LY ++++ + E+E V G+ ++ + G HR
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHR 136
Query: 125 DLKPENLL--VSKD---TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYL---- 175
++KP N++ + +D K+ DFG ARE+ F T Y P++ ++ L
Sbjct: 137 NIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKDH 196
Query: 176 ---YSSKVDMWAMGAIMAELIT----LRPLFPGTSEADEI-YKICSVIGTPT 219
Y + VD+W++G T RP F G E+ YKI + G P+
Sbjct: 197 QKKYGATVDLWSIGVTFYHAATGSLPFRP-FEGPRRNKEVMYKI--ITGKPS 245
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 111/217 (51%), Gaps = 24/217 (11%)
Query: 6 LIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+KE+G G FG V WR VAIK +K+ S +E + E K + +SH
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYD-----VAIKMIKEGSMSEDEFI--EEAKVMMNLSHEK 80
Query: 62 IVKLKEVIRENDILYFVFEYME--CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V + ++ + EYM C L L + R + F ++ C V + + Y+ +
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESK 139
Query: 120 GYFHRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQSYL 175
+ HRDL N LV+ + +K++DFGL+R + +T V +++ + PEVL+ S
Sbjct: 140 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSK- 197
Query: 176 YSSKVDMWAMGAIMAELITLRPL----FPGTSEADEI 208
+SSK D+WA G +M E+ +L + F + A+ I
Sbjct: 198 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 234
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 109/207 (52%), Gaps = 13/207 (6%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E +L ++G G FG VW + V AIK +K S E L+E + ++K+ H
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPE--AFLQEAQVMKKLRHEK 71
Query: 62 IVKLKEVIRENDILYFVFEYM-ECNLYQLMK-DREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ E I Y V EYM + +L +K + K ++ + Q+ G+AY+ +
Sbjct: 72 LVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 120 GYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQSYL 175
Y HRDL+ N+LV ++ + K+ADFGLAR I +T ++ + APE L
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADFGLARLIEDN-EWTARQGAKFPIKWTAPEAALYGR- 188
Query: 176 YSSKVDMWAMGAIMAELITL-RPLFPG 201
++ K D+W+ G ++ EL T R +PG
Sbjct: 189 FTIKSDVWSFGILLTELTTKGRVPYPG 215
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 112/214 (52%), Gaps = 18/214 (8%)
Query: 6 LIKEVGDGTFGSVWRAISKQSGEV-VAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVK 64
+KE+G G FG V K G+ VAIK +K+ S +E + E K + +SH +V+
Sbjct: 12 FLKELGTGQFGVV--KYGKWRGQYDVAIKMIKEGSMSEDEFIE--EAKVMMNLSHEKLVQ 67
Query: 65 LKEVIRENDILYFVFEYME--CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYF 122
L V + ++ + EYM C L L + R + F ++ C V + + Y+ + +
Sbjct: 68 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL 126
Query: 123 HRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQSYLYSS 178
HRDL N LV+ + +K++DFGL+R + +T V +++ + PEVL+ S +SS
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSK-FSS 184
Query: 179 KVDMWAMGAIMAELITLRPL----FPGTSEADEI 208
K D+WA G +M E+ +L + F + A+ I
Sbjct: 185 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 218
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 111/217 (51%), Gaps = 24/217 (11%)
Query: 6 LIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+KE+G G FG V WR VAIK +K+ S +E + E K + +SH
Sbjct: 19 FLKELGTGQFGVVKYGKWRGQYD-----VAIKMIKEGSMSEDEFIE--EAKVMMNLSHEK 71
Query: 62 IVKLKEVIRENDILYFVFEYME--CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V + ++ + EYM C L L + R + F ++ C V + + Y+ +
Sbjct: 72 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESK 130
Query: 120 GYFHRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQSYL 175
+ HRDL N LV+ + +K++DFGL+R + +T V +++ + PEVL+ S
Sbjct: 131 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSK- 188
Query: 176 YSSKVDMWAMGAIMAELITLRPL----FPGTSEADEI 208
+SSK D+WA G +M E+ +L + F + A+ I
Sbjct: 189 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 225
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 112/214 (52%), Gaps = 18/214 (8%)
Query: 6 LIKEVGDGTFGSVWRAISKQSGEV-VAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVK 64
+KE+G G FG V K G+ VAIK +K+ S +E + E K + +SH +V+
Sbjct: 13 FLKELGTGQFGVV--KYGKWRGQYDVAIKMIKEGSMSEDEFI--EEAKVMMNLSHEKLVQ 68
Query: 65 LKEVIRENDILYFVFEYME--CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYF 122
L V + ++ + EYM C L L + R + F ++ C V + + Y+ + +
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL 127
Query: 123 HRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQSYLYSS 178
HRDL N LV+ + +K++DFGL+R + +T V +++ + PEVL+ S +SS
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSK-FSS 185
Query: 179 KVDMWAMGAIMAELITLRPL----FPGTSEADEI 208
K D+WA G +M E+ +L + F + A+ I
Sbjct: 186 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 219
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 111/217 (51%), Gaps = 24/217 (11%)
Query: 6 LIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+KE+G G FG V WR VAIK +K+ S +E + E K + +SH
Sbjct: 8 FLKELGTGQFGVVKYGKWRGQYD-----VAIKMIKEGSMSEDEFIE--EAKVMMNLSHEK 60
Query: 62 IVKLKEVIRENDILYFVFEYME--CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V + ++ + EYM C L L + R + F ++ C V + + Y+ +
Sbjct: 61 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESK 119
Query: 120 GYFHRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQSYL 175
+ HRDL N LV+ + +K++DFGL+R + +T V +++ + PEVL+ S
Sbjct: 120 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSK- 177
Query: 176 YSSKVDMWAMGAIMAELITLRPL----FPGTSEADEI 208
+SSK D+WA G +M E+ +L + F + A+ I
Sbjct: 178 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 214
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 36/299 (12%)
Query: 4 YKLIKEV-GDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRK-MSHPN 61
Y+L ++V G+G V I+ + + A+K ++K+ V REV+ L + H N
Sbjct: 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRV-FREVEMLYQCQGHRN 72
Query: 62 IVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGY 121
+++L E E D Y VFE M + + F+E E V L ++H +G
Sbjct: 73 VLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGI 132
Query: 122 FHRDLKPENLLVSKDT----IKIADFGLAREIN--------SRPPFTEYVSTRWYRAPEV 169
HRDLKPEN+L +KI DF L I S P + Y APEV
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 170 L----LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEAD---EIYKICSVIGTPTQDS 222
+ ++ +Y + D+W++G I+ L++ P F G +D + + C +S
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFES 252
Query: 223 WADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHP 281
+G Y+FP +S A KD LI+ L D +R +AA+ LQHP
Sbjct: 253 IQEG-------KYEFPDKDWAHISC----AAKD---LISKLLVRDAKQRLSAAQVLQHP 297
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 135/289 (46%), Gaps = 44/289 (15%)
Query: 1 MERYKLI--KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
MER + ++G G +G V+ + K+ VA+K +K+ EE L+E ++++
Sbjct: 12 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 69
Query: 59 HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNW-CFQVFQGLAYM 116
HPN+V+L V Y + E+M NL +++ + A V + Q+ + Y+
Sbjct: 70 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS---RPPFTEYVSTRWYRAPEVLLQ 172
++ + HRDL N LV ++ +K+ADFGL+R + P +W APE L
Sbjct: 130 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW-TAPESLAY 188
Query: 173 SYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ +S K D+WA G ++ E+ T + P +PG + ++Y+ LL
Sbjct: 189 NK-FSIKSDVWAFGVLLWEIATYGMSP-YPGI-DLSQVYE-----------------LLE 228
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
+ +Y+ + G P V L+ + W+PS RP+ AE Q
Sbjct: 229 K--DYRMERPEGCPEKVY---------ELMRACWQWNPSDRPSFAEIHQ 266
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 128/312 (41%), Gaps = 72/312 (23%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSHP- 60
++ I +G G FG V +A + AIKK++ EE ++ L EV L ++H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASLNHQY 63
Query: 61 ------------NIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCF 107
N VK +++ L+ EY E LY L+ E
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR 123
Query: 108 QVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREIN---------------S 151
Q+ + L+Y+H +G HRDLKP N+ + + +KI DFGLA+ ++ S
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 152 RPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKI 211
T + T Y A EVL + Y+ K+DM+++G I E+I P G + + K+
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERVNILKKL 241
Query: 212 CSVIGTPTQDSWADGLLLARAINYKFPQLVGVPLSVLMPSANKDAV----SLIASLCSWD 267
R+++ +FP P + + + +I L D
Sbjct: 242 -------------------RSVSIEFP-----------PDFDDNKMKVEKKIIRLLIDHD 271
Query: 268 PSKRPTAAEALQ 279
P+KRP A L
Sbjct: 272 PNKRPGARTLLN 283
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 108/210 (51%), Gaps = 19/210 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E +L ++G G FG VW + V AIK +K S E L+E + ++K+ H
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGNMSPE--AFLQEAQVMKKLRHEK 241
Query: 62 IVKLKEVIRENDILYFVFEYM-ECNLYQLMK-DREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ E I Y V EYM + +L +K + K ++ + Q+ G+AY+ +
Sbjct: 242 LVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 300
Query: 120 GYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVSTRW------YRAPEVLLQ 172
Y HRDL+ N+LV ++ + K+ADFGL R I EY + + + APE L
Sbjct: 301 NYVHRDLRAANILVGENLVCKVADFGLGRLIED----NEYTARQGAKFPIKWTAPEAALY 356
Query: 173 SYLYSSKVDMWAMGAIMAELITL-RPLFPG 201
++ K D+W+ G ++ EL T R +PG
Sbjct: 357 GR-FTIKSDVWSFGILLTELTTKGRVPYPG 385
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 135/289 (46%), Gaps = 44/289 (15%)
Query: 1 MERYKLI--KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
MER + ++G G +G V+ + K+ VA+K +K+ EE L+E ++++
Sbjct: 11 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 68
Query: 59 HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNW-CFQVFQGLAYM 116
HPN+V+L V Y + E+M NL +++ + A V + Q+ + Y+
Sbjct: 69 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS---RPPFTEYVSTRWYRAPEVLLQ 172
++ + HRDL N LV ++ +K+ADFGL+R + P +W APE L
Sbjct: 129 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW-TAPESLAY 187
Query: 173 SYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ +S K D+WA G ++ E+ T + P +PG + ++Y+ LL
Sbjct: 188 NK-FSIKSDVWAFGVLLWEIATYGMSP-YPGI-DLSQVYE-----------------LLE 227
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
+ +Y+ + G P V L+ + W+PS RP+ AE Q
Sbjct: 228 K--DYRMERPEGCPEKVY---------ELMRACWQWNPSDRPSFAEIHQ 265
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 138/289 (47%), Gaps = 44/289 (15%)
Query: 1 MERYKLI--KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
MER + ++G G +G V+ + K+ VA+K +K+ EE L+E ++++
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 72
Query: 59 HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNW-CFQVFQGLAYM 116
HPN+V+L V Y + E+M NL +++ + A V + Q+ + Y+
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 117 HQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQ 172
++ + HRDL N LV ++ +K+ADFGL+R + + T + ++ + APE L
Sbjct: 133 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAY 191
Query: 173 SYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ +S K D+WA G ++ E+ T + P +PG + ++Y+ LL
Sbjct: 192 NK-FSIKSDVWAFGVLLWEIATYGMSP-YPGI-DLSQVYE-----------------LLE 231
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
+ +Y+ + G P V L+ + W+PS RP+ AE Q
Sbjct: 232 K--DYRMERPEGCPEKVY---------ELMRACWQWNPSDRPSFAEIHQ 269
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 137/289 (47%), Gaps = 44/289 (15%)
Query: 1 MERYKLI--KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
MER + ++G G +G V+ + K+ VA+K +K+ EE L+E ++++
Sbjct: 214 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 271
Query: 59 HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNW-CFQVFQGLAYM 116
HPN+V+L V Y + E+M NL +++ + A V + Q+ + Y+
Sbjct: 272 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 331
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQ 172
++ + HR+L N LV ++ +K+ADFGL+R + + +T + ++ + APE L
Sbjct: 332 EKKNFIHRNLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAY 390
Query: 173 SYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ +S K D+WA G ++ E+ T + P +PG + ++Y++
Sbjct: 391 N-KFSIKSDVWAFGVLLWEIATYGMSP-YPGI-DLSQVYELLEK---------------- 431
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
+Y+ + G P V L+ + W+PS RP+ AE Q
Sbjct: 432 ---DYRMERPEGCPEKVY---------ELMRACWQWNPSDRPSFAEIHQ 468
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 111/203 (54%), Gaps = 20/203 (9%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKS------- 53
++ +++++ +G G+FG V S+ +G A+K +KK E V L++V+
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKK-----EIVVRLKQVEHTNDERLM 59
Query: 54 LRKMSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQG 112
L ++HP I+++ ++ ++ + +Y+E L+ L++ ++ F + + +V
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR-FPNPVAKFYAAEVCLA 118
Query: 113 LAYMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYV-STRWYRAPEVL 170
L Y+H + +RDLKPEN+L+ K+ IKI DFG A+ + P T + T Y APEV
Sbjct: 119 LEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV---PDVTYXLCGTPDYIAPEV- 174
Query: 171 LQSYLYSSKVDMWAMGAIMAELI 193
+ + Y+ +D W+ G ++ E++
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEML 197
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 137/289 (47%), Gaps = 44/289 (15%)
Query: 1 MERYKLI--KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
MER + ++G G +G V+ + K+ VA+K +K+ EE L+E ++++
Sbjct: 256 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 313
Query: 59 HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNW-CFQVFQGLAYM 116
HPN+V+L V Y + E+M NL +++ + A V + Q+ + Y+
Sbjct: 314 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 373
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQ 172
++ + HR+L N LV ++ +K+ADFGL+R + + +T + ++ + APE L
Sbjct: 374 EKKNFIHRNLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAY 432
Query: 173 SYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ +S K D+WA G ++ E+ T + P +PG + ++Y++
Sbjct: 433 N-KFSIKSDVWAFGVLLWEIATYGMSP-YPGI-DLSQVYELLEK---------------- 473
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
+Y+ + G P V L+ + W+PS RP+ AE Q
Sbjct: 474 ---DYRMERPEGCPEKVY---------ELMRACWQWNPSDRPSFAEIHQ 510
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 128/312 (41%), Gaps = 72/312 (23%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSHP- 60
++ I +G G FG V +A + AIKK++ EE ++ L EV L ++H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASLNHQY 63
Query: 61 ------------NIVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCF 107
N VK +++ L+ EY E LY L+ E
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 108 QVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREIN---------------S 151
Q+ + L+Y+H +G HRDLKP N+ + + +KI DFGLA+ ++ S
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 152 RPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKI 211
T + T Y A EVL + Y+ K+DM+++G I E+I P G + + K+
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERVNILKKL 241
Query: 212 CSVIGTPTQDSWADGLLLARAINYKFPQLVGVPLSVLMPSANKDAV----SLIASLCSWD 267
R+++ +FP P + + + +I L D
Sbjct: 242 -------------------RSVSIEFP-----------PDFDDNKMKVEKKIIRLLIDHD 271
Query: 268 PSKRPTAAEALQ 279
P+KRP A L
Sbjct: 272 PNKRPGARTLLN 283
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 108/217 (49%), Gaps = 24/217 (11%)
Query: 6 LIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+KE+G G FG V WR VAIK +K+ S +E + E K + +SH
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYD-----VAIKMIKEGSMSEDEFI--EEAKVMMNLSHEK 80
Query: 62 IVKLKEVIRENDILYFVFEYME--CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V + ++ + EYM C L L + R + F ++ C V + + Y+ +
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESK 139
Query: 120 GYFHRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTEYVS---TRWYRAPEVLLQSYL 175
+ HRDL N LV+ + +K++DFGL+R + + S RW PEVL+ S
Sbjct: 140 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRW-SPPEVLMYSK- 197
Query: 176 YSSKVDMWAMGAIMAELITLRPL----FPGTSEADEI 208
+SSK D+WA G +M E+ +L + F + A+ I
Sbjct: 198 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 234
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 107/199 (53%), Gaps = 18/199 (9%)
Query: 10 VGDGTFGSVWRA--ISKQSGEV-VAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLK 66
+G G FG V+ I + + AIK + + + LRE +R ++HPN++ L
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 67 EVIRENDIL-YFVFEYM-ECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHR 124
++ + L + + YM +L Q ++ ++ + ++ ++ QV +G+ Y+ ++ + HR
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHR 148
Query: 125 DLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEV--------LLQSYL 175
DL N ++ + T+K+ADFGLAR+I R EY S + +R + LQ+Y
Sbjct: 149 DLAARNCMLDESFTVKVADFGLARDILDR----EYYSVQQHRHARLPVKWTALESLQTYR 204
Query: 176 YSSKVDMWAMGAIMAELIT 194
+++K D+W+ G ++ EL+T
Sbjct: 205 FTTKSDVWSFGVLLWELLT 223
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 139/289 (48%), Gaps = 44/289 (15%)
Query: 1 MERYKLI--KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
MER + ++G G +G V+ + K+ VA+K +K+ EE L+E ++++
Sbjct: 217 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 274
Query: 59 HPNIVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNW-CFQVFQGLAYM 116
HPN+V+L V Y + E+M NL +++ + A V + Q+ + Y+
Sbjct: 275 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 334
Query: 117 HQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRW---YRAPEVLLQ 172
++ + HR+L N LV ++ +K+ADFGL+R + + +T + ++ + APE L
Sbjct: 335 EKKNFIHRNLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAY 393
Query: 173 SYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLA 230
+ +S K D+WA G ++ E+ T + P +PG + ++Y+ LL
Sbjct: 394 N-KFSIKSDVWAFGVLLWEIATYGMSP-YPGI-DLSQVYE-----------------LLE 433
Query: 231 RAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
+ +Y+ + G P V L+ + W+PS RP+ AE Q
Sbjct: 434 K--DYRMERPEGCPEKVY---------ELMRACWQWNPSDRPSFAEIHQ 471
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 111/201 (55%), Gaps = 16/201 (7%)
Query: 7 IKE-VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSHPNIV 63
IKE +G G+FG+V RA + G VA+K + ++ + E VN LREV ++++ HPNIV
Sbjct: 41 IKEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAER-VNEFLREVAIMKRLRHPNIV 97
Query: 64 KLKEVIRENDILYFVFEYM-ECNLYQLMKD---REKCFSEAEVRNWCFQVFQGLAYMHQR 119
+ + L V EY+ +LY+L+ RE+ E + + V +G+ Y+H R
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ-LDERRRLSMAYDVAKGMNYLHNR 156
Query: 120 G--YFHRDLKPENLLVSKD-TIKIADFGLAR-EINSRPPFTEYVSTRWYRAPEVLLQSYL 175
HR+LK NLLV K T+K+ DFGL+R + ++ T + APEV L+
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEV-LRDEP 215
Query: 176 YSSKVDMWAMGAIMAELITLR 196
+ K D+++ G I+ EL TL+
Sbjct: 216 SNEKSDVYSFGVILWELATLQ 236
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 130/295 (44%), Gaps = 43/295 (14%)
Query: 1 MERYKLIKEV-GDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSL--RKM 57
++ YK+ +V G G G V + +K++ E A+K + ++C R L R
Sbjct: 30 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 82
Query: 58 SHPNIVKLKEVIRE----NDILYFVFEYMECN-LYQLMKDR-EKCFSEAEVRNWCFQVFQ 111
P+IV++ +V L V E ++ L+ ++DR ++ F+E E + +
Sbjct: 83 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 142
Query: 112 GLAYMHQRGYFHRDLKPENLLVSKD----TIKIADFGLAREINSRPPFTEYVSTRWYRAP 167
+ Y+H HRD+KPENLL + +K+ DFG A+E S T T +Y AP
Sbjct: 143 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 202
Query: 168 EVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGL 227
EVL Y DMW++G IM L+ P F Y + +P +
Sbjct: 203 EVLGPEK-YDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT----- 247
Query: 228 LLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
R Y+FP +S ++ LI +L +P++R T E + HP+
Sbjct: 248 -RIRMGQYEFPNPEWSEVS-------EEVKMLIRNLLKTEPTQRMTITEFMNHPW 294
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 130/295 (44%), Gaps = 43/295 (14%)
Query: 1 MERYKLIKEV-GDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSL--RKM 57
++ YK+ +V G G G V + +K++ E A+K + ++C R L R
Sbjct: 22 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 74
Query: 58 SHPNIVKLKEVIRE----NDILYFVFEYMECN-LYQLMKDR-EKCFSEAEVRNWCFQVFQ 111
P+IV++ +V L V E ++ L+ ++DR ++ F+E E + +
Sbjct: 75 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 134
Query: 112 GLAYMHQRGYFHRDLKPENLLVSKD----TIKIADFGLAREINSRPPFTEYVSTRWYRAP 167
+ Y+H HRD+KPENLL + +K+ DFG A+E S T T +Y AP
Sbjct: 135 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 194
Query: 168 EVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGL 227
EVL Y DMW++G IM L+ P F Y + +P +
Sbjct: 195 EVLGPEK-YDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT----- 239
Query: 228 LLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
R Y+FP +S ++ LI +L +P++R T E + HP+
Sbjct: 240 -RIRMGQYEFPNPEWSEVS-------EEVKMLIRNLLKTEPTQRMTITEFMNHPW 286
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 130/295 (44%), Gaps = 43/295 (14%)
Query: 1 MERYKLIKEV-GDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSL--RKM 57
++ YK+ +V G G G V + +K++ E A+K + ++C R L R
Sbjct: 15 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 67
Query: 58 SHPNIVKLKEVIRE----NDILYFVFEYMECN-LYQLMKDR-EKCFSEAEVRNWCFQVFQ 111
P+IV++ +V L V E ++ L+ ++DR ++ F+E E + +
Sbjct: 68 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 127
Query: 112 GLAYMHQRGYFHRDLKPENLLVSKD----TIKIADFGLAREINSRPPFTEYVSTRWYRAP 167
+ Y+H HRD+KPENLL + +K+ DFG A+E S T T +Y AP
Sbjct: 128 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 187
Query: 168 EVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGL 227
EVL Y DMW++G IM L+ P F Y + +P +
Sbjct: 188 EVLGPEK-YDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT----- 232
Query: 228 LLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
R Y+FP +S ++ LI +L +P++R T E + HP+
Sbjct: 233 -RIRMGQYEFPNPEWSEVS-------EEVKMLIRNLLKTEPTQRMTITEFMNHPW 279
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 130/295 (44%), Gaps = 43/295 (14%)
Query: 1 MERYKLIKEV-GDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSL--RKM 57
++ YK+ +V G G G V + +K++ E A+K + ++C R L R
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 66
Query: 58 SHPNIVKLKEVIRE----NDILYFVFEYMECN-LYQLMKDR-EKCFSEAEVRNWCFQVFQ 111
P+IV++ +V L V E ++ L+ ++DR ++ F+E E + +
Sbjct: 67 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 126
Query: 112 GLAYMHQRGYFHRDLKPENLLVSKD----TIKIADFGLAREINSRPPFTEYVSTRWYRAP 167
+ Y+H HRD+KPENLL + +K+ DFG A+E S T T +Y AP
Sbjct: 127 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 186
Query: 168 EVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGL 227
EVL Y DMW++G IM L+ P F Y + +P +
Sbjct: 187 EVLGPEK-YDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT----- 231
Query: 228 LLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
R Y+FP +S ++ LI +L +P++R T E + HP+
Sbjct: 232 -RIRMGQYEFPNPEWSEVS-------EEVKMLIRNLLKTEPTQRMTITEFMNHPW 278
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 113/227 (49%), Gaps = 19/227 (8%)
Query: 10 VGDGTFGSVWRAISKQSGE---VVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLK 66
+G G FG V K G+ VAIK +K Y + L E + + HPNI+ L+
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 67 EVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRD 125
V+ ++ + V EYME +L +K + F+ ++ + G+ Y+ GY HRD
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRD 149
Query: 126 LKPENLLVSKDTI-KIADFGLAREINSRP--PFTEY---VSTRWYRAPEVLLQSYLYSSK 179
L N+L++ + + K++DFGL+R + P +T + RW APE + ++S
Sbjct: 150 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TAPEAIAFRK-FTSA 207
Query: 180 VDMWAMGAIMAELITL--RPLFPGTSE-----ADEIYKICSVIGTPT 219
D+W+ G +M E+++ RP + T++ +E Y++ S + P
Sbjct: 208 SDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMDCPA 254
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 130/295 (44%), Gaps = 42/295 (14%)
Query: 7 IKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVK-SLRKMSHPNIVKL 65
I E+G G +G V + SG+++A+K+++ S E+ L ++ S+R + P V
Sbjct: 56 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTF 115
Query: 66 -KEVIRENDILYFVFEYMECNL---YQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR-G 120
+ RE D+ + E M+ +L Y+ + D+ + E + + + L ++H +
Sbjct: 116 YGALFREGDV-WICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS 174
Query: 121 YFHRDLKPENLLVSK-DTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVL---LQSYLY 176
HRD+KP N+L++ +K+ DFG++ + T + Y APE + L Y
Sbjct: 175 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGY 234
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
S K D+W++G M EL LR FP S GTP Q L + +
Sbjct: 235 SVKSDIWSLGITMIELAILR--FPYDS-----------WGTPFQQ-------LKQVVEEP 274
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPFSRVAFMFHH 291
PQL S + V + + +RPT E +QHPF F H
Sbjct: 275 SPQLPADKFSA-------EFVDFTSQCLKKNSKERPTYPELMQHPF----FTLHE 318
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 130/295 (44%), Gaps = 43/295 (14%)
Query: 1 MERYKLIKEV-GDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSL--RKM 57
++ YK+ +V G G G V + +K++ E A+K + ++C R L R
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 68
Query: 58 SHPNIVKLKEVIRE----NDILYFVFEYMECN-LYQLMKDR-EKCFSEAEVRNWCFQVFQ 111
P+IV++ +V L V E ++ L+ ++DR ++ F+E E + +
Sbjct: 69 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 112 GLAYMHQRGYFHRDLKPENLLVSKD----TIKIADFGLAREINSRPPFTEYVSTRWYRAP 167
+ Y+H HRD+KPENLL + +K+ DFG A+E S T T +Y AP
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 188
Query: 168 EVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGL 227
EVL Y DMW++G IM L+ P F Y + +P +
Sbjct: 189 EVLGPEK-YDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT----- 233
Query: 228 LLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
R Y+FP +S ++ LI +L +P++R T E + HP+
Sbjct: 234 -RIRMGQYEFPNPEWSEVS-------EEVKMLIRNLLKTEPTQRMTITEFMNHPW 280
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 114/229 (49%), Gaps = 19/229 (8%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHP 60
M+ KL++ +G G FG V + G VA+K +K + L E + ++ H
Sbjct: 11 MKELKLLQTIGKGEFGDV--MLGDYRGNKVAVKCIKNDATAQ---AFLAEASVMTQLRHS 65
Query: 61 NIVKLKEVI-RENDILYFVFEYM-ECNLYQLMKDREKCFSEAE-VRNWCFQVFQGLAYMH 117
N+V+L VI E LY V EYM + +L ++ R + + + + V + + Y+
Sbjct: 66 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 125
Query: 118 QRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRDL N+LVS+D + K++DFGL +E +S T + +W APE L ++ +
Sbjct: 126 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKW-TAPEALREA-AF 182
Query: 177 SSKVDMWAMGAIMAELITLR-------PLFPGTSEADEIYKICSVIGTP 218
S+K D+W+ G ++ E+ + PL ++ YK+ + G P
Sbjct: 183 STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCP 231
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 109/214 (50%), Gaps = 16/214 (7%)
Query: 5 KLIKEVGDGTFGSVWRAISKQSGE---VVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
K+ + +G G FG V K G+ VAIK +K Y + L E + + HPN
Sbjct: 36 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 95
Query: 62 IVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
++ L+ V+ ++ + + E+ME +L ++ + F+ ++ + G+ Y+
Sbjct: 96 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN 155
Query: 121 YFHRDLKPENLLVSKDTI-KIADFGLAR---EINSRPPFTEY----VSTRWYRAPEVLLQ 172
Y HRDL N+LV+ + + K++DFGL+R + S P +T + RW APE +Q
Sbjct: 156 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW-TAPEA-IQ 213
Query: 173 SYLYSSKVDMWAMGAIMAELITL--RPLFPGTSE 204
++S D+W+ G +M E+++ RP + T++
Sbjct: 214 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ 247
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 130/295 (44%), Gaps = 43/295 (14%)
Query: 1 MERYKLIKEV-GDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSL--RKM 57
++ YK+ +V G G G V + +K++ E A+K + ++C R L R
Sbjct: 20 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 72
Query: 58 SHPNIVKLKEVIRE----NDILYFVFEYMECN-LYQLMKDR-EKCFSEAEVRNWCFQVFQ 111
P+IV++ +V L V E ++ L+ ++DR ++ F+E E + +
Sbjct: 73 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 132
Query: 112 GLAYMHQRGYFHRDLKPENLLVSKD----TIKIADFGLAREINSRPPFTEYVSTRWYRAP 167
+ Y+H HRD+KPENLL + +K+ DFG A+E S T T +Y AP
Sbjct: 133 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 192
Query: 168 EVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGL 227
EVL Y DMW++G IM L+ P F Y + +P +
Sbjct: 193 EVLGPEK-YDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT----- 237
Query: 228 LLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
R Y+FP +S ++ LI +L +P++R T E + HP+
Sbjct: 238 -RIRMGQYEFPNPEWSEVS-------EEVKMLIRNLLKTEPTQRMTITEFMNHPW 284
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 130/295 (44%), Gaps = 43/295 (14%)
Query: 1 MERYKLIKEV-GDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSL--RKM 57
++ YK+ +V G G G V + +K++ E A+K + ++C R L R
Sbjct: 21 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 73
Query: 58 SHPNIVKLKEVIRE----NDILYFVFEYMECN-LYQLMKDR-EKCFSEAEVRNWCFQVFQ 111
P+IV++ +V L V E ++ L+ ++DR ++ F+E E + +
Sbjct: 74 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 133
Query: 112 GLAYMHQRGYFHRDLKPENLLVSKD----TIKIADFGLAREINSRPPFTEYVSTRWYRAP 167
+ Y+H HRD+KPENLL + +K+ DFG A+E S T T +Y AP
Sbjct: 134 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 193
Query: 168 EVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGL 227
EVL Y DMW++G IM L+ P F Y + +P +
Sbjct: 194 EVLGPEK-YDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT----- 238
Query: 228 LLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
R Y+FP +S ++ LI +L +P++R T E + HP+
Sbjct: 239 -RIRMGQYEFPNPEWSEVS-------EEVKMLIRNLLKTEPTQRMTITEFMNHPW 285
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 130/295 (44%), Gaps = 43/295 (14%)
Query: 1 MERYKLIKEV-GDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSL--RKM 57
++ YK+ +V G G G V + +K++ E A+K + ++C R L R
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 68
Query: 58 SHPNIVKLKEVIRE----NDILYFVFEYMECN-LYQLMKDR-EKCFSEAEVRNWCFQVFQ 111
P+IV++ +V L V E ++ L+ ++DR ++ F+E E + +
Sbjct: 69 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 112 GLAYMHQRGYFHRDLKPENLLVSKD----TIKIADFGLAREINSRPPFTEYVSTRWYRAP 167
+ Y+H HRD+KPENLL + +K+ DFG A+E S T T +Y AP
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 188
Query: 168 EVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGL 227
EVL Y DMW++G IM L+ P F Y + +P +
Sbjct: 189 EVLGPEK-YDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT----- 233
Query: 228 LLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
R Y+FP +S ++ LI +L +P++R T E + HP+
Sbjct: 234 -RIRMGQYEFPNPEWSEVS-------EEVKMLIRNLLKTEPTQRMTITEFMNHPW 280
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 130/295 (44%), Gaps = 43/295 (14%)
Query: 1 MERYKLIKEV-GDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSL--RKM 57
++ YK+ +V G G G V + +K++ E A+K + ++C R L R
Sbjct: 66 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 118
Query: 58 SHPNIVKLKEVIRE----NDILYFVFEYMECN-LYQLMKDR-EKCFSEAEVRNWCFQVFQ 111
P+IV++ +V L V E ++ L+ ++DR ++ F+E E + +
Sbjct: 119 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 178
Query: 112 GLAYMHQRGYFHRDLKPENLLVSKD----TIKIADFGLAREINSRPPFTEYVSTRWYRAP 167
+ Y+H HRD+KPENLL + +K+ DFG A+E S T T +Y AP
Sbjct: 179 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 238
Query: 168 EVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGL 227
EVL Y DMW++G IM L+ P F Y + +P +
Sbjct: 239 EVLGPEK-YDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT----- 283
Query: 228 LLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
R Y+FP +S ++ LI +L +P++R T E + HP+
Sbjct: 284 -RIRMGQYEFPNPEWSEVS-------EEVKMLIRNLLKTEPTQRMTITEFMNHPW 330
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 22/209 (10%)
Query: 2 ERY-KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRK 56
+RY K I+++G+G FG V + + +GE+VA+K +K +E+ LR
Sbjct: 13 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRT 72
Query: 57 MSHPNIVKLKEVIREND--ILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
+ H +I+K K + L V EY+ + R A++ + Q+ +G+A
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMA 131
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTR--------WYR 165
Y+H + Y HR+L N+L+ D +KI DFGLA+ + P EY R WY
Sbjct: 132 YLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAV---PEGHEYYRVREDGDSPVFWY- 187
Query: 166 APEVLLQSYLYSSKVDMWAMGAIMAELIT 194
APE L+ Y + D+W+ G + EL+T
Sbjct: 188 APEC-LKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 126/264 (47%), Gaps = 32/264 (12%)
Query: 4 YKLIKEV-GDGTFGSVWRAISKQSGE---VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
Y I+EV G G FG V R K G+ VAIK +K Y + L E + + H
Sbjct: 15 YVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEH 74
Query: 60 PNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
PNI++L+ V+ + + + E+ME L ++ + F+ ++ + G+ Y+ +
Sbjct: 75 PNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAE 134
Query: 119 RGYFHRDLKPENLLVSKDTI-KIADFGLAR---EINSRPPFTEY----VSTRWYRAPEVL 170
Y HRDL N+LV+ + + K++DFGL+R E +S P +T + RW APE +
Sbjct: 135 MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWT-APEAI 193
Query: 171 LQSYLYSSKVDMWAMGAIMAELITL--RPLFPGTSEA-----DEIYKICSVIGTPTQ--- 220
++S D W+ G +M E+++ RP + +++ ++ Y++ PT
Sbjct: 194 AFRK-FTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDCPTSLHQ 252
Query: 221 ---DSWADGLLLARAINYKFPQLV 241
D W R +FPQ+V
Sbjct: 253 LMLDCWQKD----RNARPRFPQVV 272
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 141/340 (41%), Gaps = 68/340 (20%)
Query: 4 YKLIKEVGDGTFGSVWRAISK-QSG--EVVAIKKMKKKYYSWEECVNLREVKSLRKMSHP 60
+K+ ++G+GTF SV+ A ++ Q G E +A+K + + L+ +
Sbjct: 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTV--AGGQD 80
Query: 61 NIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
N++ +K R+ND + Y+E ++ D S EVR + +F+ L +HQ G
Sbjct: 81 NVMGVKYCFRKNDHVVIAMPYLE---HESFLDILNSLSFQEVREYMLNLFKALKRIHQFG 137
Query: 121 YFHRDLKPENLLVSKDTIKIA--DFGLARE-----------------------------I 149
HRD+KP N L ++ K A DFGLA+ +
Sbjct: 138 IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICL 197
Query: 150 NSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLR-PLFPGTSEADEI 208
+ R T +RAPEVL + ++ +DMW+ G I L++ R P + + + +
Sbjct: 198 SRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTAL 257
Query: 209 YKICSVIGT----PTQDSWADGLLLARAINYK-----FPQLVGVPLSVLMPSANKDAVSL 259
+I ++ G+ ++ +L ++ + + +L G+ S P D
Sbjct: 258 AQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSST--PKLTSDIQGH 315
Query: 260 IASLCSW-----------------DPSKRPTAAEALQHPF 282
+L W +P+ R TA EAL HPF
Sbjct: 316 ATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPF 355
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 22/209 (10%)
Query: 2 ERY-KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRK 56
+RY K I+++G+G FG V + + +GE+VA+K +K +E+ LR
Sbjct: 13 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRT 72
Query: 57 MSHPNIVKLKEVIREND--ILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
+ H +I+K K + L V EY+ + R A++ + Q+ +G+A
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMA 131
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTR--------WYR 165
Y+H + Y HR+L N+L+ D +KI DFGLA+ + P EY R WY
Sbjct: 132 YLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAV---PEGHEYYRVREDGDSPVFWY- 187
Query: 166 APEVLLQSYLYSSKVDMWAMGAIMAELIT 194
APE L+ Y + D+W+ G + EL+T
Sbjct: 188 APEC-LKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 130/295 (44%), Gaps = 43/295 (14%)
Query: 1 MERYKLIKEV-GDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSL--RKM 57
++ YK+ +V G G G V + +K++ E A+K + ++C R L R
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 112
Query: 58 SHPNIVKLKEVIRE----NDILYFVFEYMECN-LYQLMKDR-EKCFSEAEVRNWCFQVFQ 111
P+IV++ +V L V E ++ L+ ++DR ++ F+E E + +
Sbjct: 113 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 172
Query: 112 GLAYMHQRGYFHRDLKPENLLVSKD----TIKIADFGLAREINSRPPFTEYVSTRWYRAP 167
+ Y+H HRD+KPENLL + +K+ DFG A+E S T T +Y AP
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 232
Query: 168 EVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGL 227
EVL Y DMW++G IM L+ P F Y + +P +
Sbjct: 233 EVLGPEK-YDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT----- 277
Query: 228 LLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
R Y+FP +S ++ LI +L +P++R T E + HP+
Sbjct: 278 -RIRMGQYEFPNPEWSEVS-------EEVKMLIRNLLKTEPTQRMTITEFMNHPW 324
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 2 ERY-KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRK 56
+RY K I+++G+G FG V + + +GE+VA+K +K +E+ LR
Sbjct: 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRT 89
Query: 57 MSHPNIVKLKEVIRENDI--LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
+ H +I+K K + L V EY+ + R A++ + Q+ +G+A
Sbjct: 90 LYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMA 148
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTR--------WYR 165
Y+H + Y HRDL N+L+ D +KI DFGLA+ + P E R WY
Sbjct: 149 YLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV---PEGHEXYRVREDGDSPVFWY- 204
Query: 166 APEVLLQSYLYSSKVDMWAMGAIMAELIT 194
APE L+ Y + D+W+ G + EL+T
Sbjct: 205 APEC-LKEYKFYYASDVWSFGVTLYELLT 232
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 113/218 (51%), Gaps = 15/218 (6%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E KL++ +G G G VW +V A+K +K+ S + L E ++++ H
Sbjct: 13 ETLKLVERLGAGQAGEVWMGYYNGHTKV-AVKSLKQGSMSPDAF--LAEANLMKQLQHQR 69
Query: 62 IVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKC-FSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ + I Y + EYME +L +K + ++ + Q+ +G+A++ +R
Sbjct: 70 LVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 120 GYFHRDLKPENLLVSKDTI--KIADFGLAREINSRPPFTEYVS---TRWYRAPEVLLQSY 174
Y HRDL+ N+LVS DT+ KIADFGLAR I + +W APE +
Sbjct: 129 NYIHRDLRAANILVS-DTLSCKIADFGLARLIEDAEXTAREGAKFPIKW-TAPEA-INYG 185
Query: 175 LYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
++ K D+W+ G ++ E++T R +PG + + I +
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 19/229 (8%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHP 60
M+ KL++ +G G FG V + G VA+K +K + L E + ++ H
Sbjct: 20 MKELKLLQTIGKGEFGDV--MLGDYRGNKVAVKCIKNDATAQ---AFLAEASVMTQLRHS 74
Query: 61 NIVKLKEVI-RENDILYFVFEYM-ECNLYQLMKDREKCFSEAE-VRNWCFQVFQGLAYMH 117
N+V+L VI E LY V EYM + +L ++ R + + + + V + + Y+
Sbjct: 75 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 134
Query: 118 QRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRDL N+LVS+D + K++DFGL +E +S T + +W APE L + +
Sbjct: 135 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKW-TAPEALREKK-F 191
Query: 177 SSKVDMWAMGAIMAELITLR-------PLFPGTSEADEIYKICSVIGTP 218
S+K D+W+ G ++ E+ + PL ++ YK+ + G P
Sbjct: 192 STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCP 240
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 13/207 (6%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
E +L ++G G FG VW + V AIK +K S E L+E + ++K+ H
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPE--AFLQEAQVMKKLRHEK 64
Query: 62 IVKLKEVIRENDILYFVFEYM-ECNLYQLMK-DREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+V+L V+ E I V EYM + +L +K + K ++ + Q+ G+AY+ +
Sbjct: 65 LVQLYAVVSEEPIX-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 123
Query: 120 GYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVST---RWYRAPEVLLQSYL 175
Y HRDL+ N+LV ++ + K+ADFGLAR I + +W APE L
Sbjct: 124 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW-TAPEAALYGR- 181
Query: 176 YSSKVDMWAMGAIMAELITL-RPLFPG 201
++ K D+W+ G ++ EL T R +PG
Sbjct: 182 FTIKSDVWSFGILLTELTTKGRVPYPG 208
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 32/264 (12%)
Query: 4 YKLIKEV-GDGTFGSVWRAISKQSGE---VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
Y I+EV G G FG V R K G+ VAIK +K Y + L E + + H
Sbjct: 17 YVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEH 76
Query: 60 PNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
PNI++L+ V+ + + + E+ME L ++ + F+ ++ + G+ Y+ +
Sbjct: 77 PNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAE 136
Query: 119 RGYFHRDLKPENLLVSKDTI-KIADFGLAR--EINSRPP-----FTEYVSTRWYRAPEVL 170
Y HRDL N+LV+ + + K++DFGL+R E NS P + RW APE +
Sbjct: 137 MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWT-APEAI 195
Query: 171 LQSYLYSSKVDMWAMGAIMAELITL--RPLFPGTSEA-----DEIYKICSVIGTPTQ--- 220
++S D W+ G +M E+++ RP + +++ ++ Y++ PT
Sbjct: 196 AFRK-FTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDCPTSLHQ 254
Query: 221 ---DSWADGLLLARAINYKFPQLV 241
D W R +FPQ+V
Sbjct: 255 LMLDCWQKD----RNARPRFPQVV 274
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 19/229 (8%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHP 60
M+ KL++ +G G FG V + G VA+K +K + L E + ++ H
Sbjct: 5 MKELKLLQTIGKGEFGDV--MLGDYRGNKVAVKCIKNDATAQ---AFLAEASVMTQLRHS 59
Query: 61 NIVKLKEVI-RENDILYFVFEYM-ECNLYQLMKDREKCFSEAE-VRNWCFQVFQGLAYMH 117
N+V+L VI E LY V EYM + +L ++ R + + + + V + + Y+
Sbjct: 60 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 119
Query: 118 QRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRDL N+LVS+D + K++DFGL +E +S T + +W APE L + +
Sbjct: 120 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKW-TAPEALREKK-F 176
Query: 177 SSKVDMWAMGAIMAELITLR-------PLFPGTSEADEIYKICSVIGTP 218
S+K D+W+ G ++ E+ + PL ++ YK+ + G P
Sbjct: 177 STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCP 225
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 118/246 (47%), Gaps = 39/246 (15%)
Query: 2 ERYKLIKEVGDGTFGSVWRA----ISKQSGEV-VAIKKMKKKYYSWEECVNLREVKSLRK 56
E + K +G G FG V A ISK + VA+K +K+K S E + E+K + +
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 57 M-SHPNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRN--------- 104
+ SH NIV L + +Y +FEY C +L ++ + + FSE E+
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYC-CYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 163
Query: 105 -------------WCFQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREIN 150
+ +QV +G+ ++ + HRDL N+LV+ +KI DFGLAR+I
Sbjct: 164 EDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 151 SRPPFTEYVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITL--RPLFPGTSEA 205
S + + R + APE L + +Y+ K D+W+ G ++ E+ +L P +PG
Sbjct: 224 SDSNYVVRGNARLPVKWMAPESLFEG-IYTIKSDVWSYGILLWEIFSLGVNP-YPGIPVD 281
Query: 206 DEIYKI 211
YK+
Sbjct: 282 ANFYKL 287
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 113/224 (50%), Gaps = 9/224 (4%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ ++ I E+G G G V++ K SG V+A K + + +RE++ L + + P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 62 IVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR- 119
IV + + E+M+ +L Q++K + E + V +GL Y+ ++
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKH 124
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
HRD+KP N+LV S+ IK+ DFG++ + I+S +V TR Y +PE LQ YS
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPE-RLQGTHYS 181
Query: 178 SKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQ 220
+ D+W+MG + E+ R P+ P ++ E+ C V G +
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 5/194 (2%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEE-CVNLREVKSLRKMS-H 59
+ ++ + +G G++G V++ SK+ G + A+K+ + ++ L EV S K+ H
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH 116
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
P V+L++ E ILY E +L Q + EA+V + LA++H +
Sbjct: 117 PCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ 176
Query: 120 GYFHRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
G H D+KP N+ + + K+ DFGL E+ + Y APE+L S Y +
Sbjct: 177 GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGS--YGT 234
Query: 179 KVDMWAMGAIMAEL 192
D++++G + E+
Sbjct: 235 AADVFSLGLTILEV 248
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 127/286 (44%), Gaps = 38/286 (13%)
Query: 7 IKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVK-SLRKMSHPNIVKL 65
I E+G G +G V + SG+++A+K+++ S E+ L ++ S+R + P V
Sbjct: 12 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTF 71
Query: 66 -KEVIRENDILYFVFEYMECNL---YQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR-G 120
+ RE D+ + E M+ +L Y+ + D+ + E + + + L ++H +
Sbjct: 72 YGALFREGDV-WICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS 130
Query: 121 YFHRDLKPENLLVSK-DTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVL---LQSYLY 176
HRD+KP N+L++ +K+ DFG++ + + Y APE + L Y
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGY 190
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
S K D+W++G M EL LR FP S GTP Q L + +
Sbjct: 191 SVKSDIWSLGITMIELAILR--FPYDS-----------WGTPFQQ-------LKQVVEEP 230
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
PQL S + V + + +RPT E +QHPF
Sbjct: 231 SPQLPADKFSA-------EFVDFTSQCLKKNSKERPTYPELMQHPF 269
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 113/224 (50%), Gaps = 9/224 (4%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ ++ I E+G G G V++ K SG V+A K + + +RE++ L + + P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 62 IVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR- 119
IV + + E+M+ +L Q++K + E + V +GL Y+ ++
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKH 124
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
HRD+KP N+LV S+ IK+ DFG++ + I+S +V TR Y +PE LQ YS
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPE-RLQGTHYS 181
Query: 178 SKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQ 220
+ D+W+MG + E+ R P+ P ++ E+ C V G +
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 19/229 (8%)
Query: 1 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHP 60
M+ KL++ +G G FG V + G VA+K +K + L E + ++ H
Sbjct: 192 MKELKLLQTIGKGEFGDV--MLGDYRGNKVAVKCIKNDATAQ---AFLAEASVMTQLRHS 246
Query: 61 NIVKLKEVI-RENDILYFVFEYM-ECNLYQLMKDREKCFSEAE-VRNWCFQVFQGLAYMH 117
N+V+L VI E LY V EYM + +L ++ R + + + + V + + Y+
Sbjct: 247 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 306
Query: 118 QRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRDL N+LVS+D + K++DFGL +E +S T + +W APE L + +
Sbjct: 307 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKW-TAPEALREKK-F 363
Query: 177 SSKVDMWAMGAIMAELITLR-------PLFPGTSEADEIYKICSVIGTP 218
S+K D+W+ G ++ E+ + PL ++ YK+ + G P
Sbjct: 364 STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCP 412
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 112/220 (50%), Gaps = 9/220 (4%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ ++ I E+G G G V++ K SG V+A K + + +RE++ L + + P
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 62 IVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR- 119
IV + + E+M+ +L Q++K + E + V +GL Y+ ++
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKH 186
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
HRD+KP N+LV S+ IK+ DFG++ + I+S +V TR Y +PE LQ YS
Sbjct: 187 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPE-RLQGTHYS 243
Query: 178 SKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIG 216
+ D+W+MG + E+ R P+ P ++ E+ C V G
Sbjct: 244 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 283
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 113/224 (50%), Gaps = 9/224 (4%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ ++ I E+G G G V++ K SG V+A K + + +RE++ L + + P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 62 IVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR- 119
IV + + E+M+ +L Q++K + E + V +GL Y+ ++
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKH 124
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
HRD+KP N+LV S+ IK+ DFG++ + I+S +V TR Y +PE LQ YS
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPE-RLQGTHYS 181
Query: 178 SKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQ 220
+ D+W+MG + E+ R P+ P ++ E+ C V G +
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 113/224 (50%), Gaps = 9/224 (4%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ ++ I E+G G G V++ K SG V+A K + + +RE++ L + + P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 62 IVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR- 119
IV + + E+M+ +L Q++K + E + V +GL Y+ ++
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKH 124
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
HRD+KP N+LV S+ IK+ DFG++ + I+S +V TR Y +PE LQ YS
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPE-RLQGTHYS 181
Query: 178 SKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQ 220
+ D+W+MG + E+ R P+ P ++ E+ C V G +
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 122/259 (47%), Gaps = 29/259 (11%)
Query: 8 KEVGDGTFGSVWRAISKQSGE---VVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVK 64
K VG G FG V K + VAIK +K Y + L E + + HPNI++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 65 LKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFH 123
L+ V+ ++ + V EYME +L ++ + F+ ++ + G+ Y+ GY H
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 124 RDLKPENLLVSKDTI-KIADFGLAREINSRP--PFTEY---VSTRWYRAPEVLLQSYLYS 177
RDL N+L++ + + K++DFGLAR + P +T + RW +PE + ++
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRW-TSPEAIAYRK-FT 228
Query: 178 SKVDMWAMGAIMAELITL--RPLFPGTSE-----ADEIYKICSVIGTPTQ------DSWA 224
S D+W+ G ++ E+++ RP + +++ DE Y++ + P D W
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 225 DGLLLARAINYKFPQLVGV 243
R KF Q+V +
Sbjct: 289 KD----RNNRPKFEQIVSI 303
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 116/226 (51%), Gaps = 14/226 (6%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ ++ I E+G G G V + + SG ++A K + + +RE++ L + + P
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 62 IVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR- 119
IV + + E+M+ +L Q++K+ ++ E + V +GLAY+ ++
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR-IPEEILGKVSIAVLRGLAYLREKH 134
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
HRD+KP N+LV S+ IK+ DFG++ + I+S +V TR Y APE LQ YS
Sbjct: 135 QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMAPE-RLQGTHYS 191
Query: 178 SKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQDS 222
+ D+W+MG + EL R P+ P +A E+ ++ G P D
Sbjct: 192 VQSDIWSMGLSLVELAVGRYPIPP--PDAKELE---AIFGRPVVDG 232
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 118/241 (48%), Gaps = 39/241 (16%)
Query: 7 IKEVGDGTFGSVWRA-----ISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
++++G+G FG V++A + + +VA+K +K++ + + RE + + +PN
Sbjct: 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPN 111
Query: 62 IVKLKEVIRENDILYFVFEYME----------------CNL-YQLMKDREKC-------F 97
IVKL V + +FEYM C+L + + R +
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171
Query: 98 SEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----R 152
S AE QV G+AY+ +R + HRDL N LV ++ +KIADFGL+R I S +
Sbjct: 172 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 153 PPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYK 210
+ + RW PE + + Y+++ D+WA G ++ E+ + L+P + G + + IY
Sbjct: 232 ADGNDAIPIRWM-PPESIFYNR-YTTESDVWAYGVVLWEIFSYGLQPYY-GMAHEEVIYY 288
Query: 211 I 211
+
Sbjct: 289 V 289
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 22/224 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAI---SKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
ER +L + +G+G FG V + I + VAIK K L+E ++R+
Sbjct: 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 74
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQL---MKDREKCFSEAEVRNWCFQVFQGLAY 115
HP+IVKL VI EN + + + E C L +L ++ R+ A + + +Q+ LAY
Sbjct: 75 HPHIVKLIGVITENPV-WIIMEL--CTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 131
Query: 116 MHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRW-----YRAPEV 169
+ + + HRD+ N+LV S D +K+ DFGL+R + T Y +++ + APE
Sbjct: 132 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS---TYYKASKGKLPIKWMAPES 188
Query: 170 LLQSYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKI 211
+ ++S D+W G M E++ ++P F G D I +I
Sbjct: 189 -INFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 230
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 22/224 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAI---SKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
ER +L + +G+G FG V + I + VAIK K L+E ++R+
Sbjct: 38 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 97
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQL---MKDREKCFSEAEVRNWCFQVFQGLAY 115
HP+IVKL VI EN + + + E C L +L ++ R+ A + + +Q+ LAY
Sbjct: 98 HPHIVKLIGVITENPV-WIIMEL--CTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 154
Query: 116 MHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRW-----YRAPEV 169
+ + + HRD+ N+LV S D +K+ DFGL+R + T Y +++ + APE
Sbjct: 155 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS---TYYKASKGKLPIKWMAPES 211
Query: 170 LLQSYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKI 211
+ ++S D+W G M E++ ++P F G D I +I
Sbjct: 212 -INFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 253
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 22/224 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAI---SKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
ER +L + +G+G FG V + I + VAIK K L+E ++R+
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQL---MKDREKCFSEAEVRNWCFQVFQGLAY 115
HP+IVKL VI EN + + + E C L +L ++ R+ A + + +Q+ LAY
Sbjct: 70 HPHIVKLIGVITENPV-WIIMEL--CTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 126
Query: 116 MHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRW-----YRAPEV 169
+ + + HRD+ N+LV S D +K+ DFGL+R + T Y +++ + APE
Sbjct: 127 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS---TYYKASKGKLPIKWMAPES 183
Query: 170 LLQSYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKI 211
+ ++S D+W G M E++ ++P F G D I +I
Sbjct: 184 -INFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 225
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 22/224 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAI---SKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
ER +L + +G+G FG V + I + VAIK K L+E ++R+
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQL---MKDREKCFSEAEVRNWCFQVFQGLAY 115
HP+IVKL VI EN + + + E C L +L ++ R+ A + + +Q+ LAY
Sbjct: 70 HPHIVKLIGVITENPV-WIIMEL--CTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 126
Query: 116 MHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRW-----YRAPEV 169
+ + + HRD+ N+LV S D +K+ DFGL+R + T Y +++ + APE
Sbjct: 127 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS---TYYKASKGKLPIKWMAPES 183
Query: 170 LLQSYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKI 211
+ ++S D+W G M E++ ++P F G D I +I
Sbjct: 184 -INFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 225
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 113/224 (50%), Gaps = 9/224 (4%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ ++ I E+G G G V++ K SG V+A K + + +RE++ L + + P
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 62 IVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR- 119
IV + + E+M+ +L Q++K + E + V +GL Y+ ++
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKH 151
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
HRD+KP N+LV S+ IK+ DFG++ + I+S +V TR Y +PE LQ YS
Sbjct: 152 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPE-RLQGTHYS 208
Query: 178 SKVDMWAMGAIMAELITLR-PLFPGTSEADEIYKICSVIGTPTQ 220
+ D+W+MG + E+ R P+ P ++ E+ C V G +
Sbjct: 209 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 252
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 109/212 (51%), Gaps = 23/212 (10%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
++L++ VG+GT+G V++ ++G++ AIK M EE +E+ L+K SH +
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIK--QEINMLKKYSHHRNI 83
Query: 64 KL--KEVIREN-----DILYFVFEYMEC-NLYQLMKD-REKCFSEAEVRNWCFQVFQGLA 114
I++N D L+ V E+ ++ L+K+ + E + C ++ +GL+
Sbjct: 84 ATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLS 143
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFG----LAREINSRPPFTEYVSTRWYRAPEV 169
++HQ HRD+K +N+L++++ +K+ DFG L R + R F + T ++ APEV
Sbjct: 144 HLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF---IGTPYWMAPEV 200
Query: 170 LL----QSYLYSSKVDMWAMGAIMAELITLRP 197
+ Y K D+W++G E+ P
Sbjct: 201 IACDENPDATYDFKSDLWSLGITAIEMAEGAP 232
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 22/224 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAI---SKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
ER +L + +G+G FG V + I + VAIK K L+E ++R+
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQL---MKDREKCFSEAEVRNWCFQVFQGLAY 115
HP+IVKL VI EN + + + E C L +L ++ R+ A + + +Q+ LAY
Sbjct: 70 HPHIVKLIGVITENPV-WIIMEL--CTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 126
Query: 116 MHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTEYVSTRW-----YRAPEV 169
+ + + HRD+ N+LVS D +K+ DFGL+R + T Y +++ + APE
Sbjct: 127 LESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDS---TYYKASKGKLPIKWMAPES 183
Query: 170 LLQSYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKI 211
+ ++S D+W G M E++ ++P F G D I +I
Sbjct: 184 -INFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 225
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 118/239 (49%), Gaps = 31/239 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAIS------KQSGEVVAIKKMKKKYYSWEECVNLREVKSLR 55
++ L K +G+G FG V A + K V KM K + E+ +L +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 56 KM--SHPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDR---------------EKCF 97
KM H NI+ L ++ LY + EY + NL + ++ R E+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 98 SEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFT 156
+ ++ + +Q+ +G+ Y+ + HRDL N+LV+++ + KIADFGLAR+IN+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 157 EYVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ + R + APE L +Y+ + D+W+ G +M E+ TL +PG +E++K+
Sbjct: 215 KTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKL 271
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 22/224 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAI---SKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
ER +L + +G+G FG V + I + VAIK K L+E ++R+
Sbjct: 12 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 71
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQL---MKDREKCFSEAEVRNWCFQVFQGLAY 115
HP+IVKL VI EN + + + E C L +L ++ R+ A + + +Q+ LAY
Sbjct: 72 HPHIVKLIGVITENPV-WIIMEL--CTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 128
Query: 116 MHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRW-----YRAPEV 169
+ + + HRD+ N+LV S D +K+ DFGL+R + T Y +++ + APE
Sbjct: 129 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS---TYYKASKGKLPIKWMAPES 185
Query: 170 LLQSYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKI 211
+ ++S D+W G M E++ ++P F G D I +I
Sbjct: 186 -INFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 227
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 22/224 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAI---SKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
ER +L + +G+G FG V + I + VAIK K L+E ++R+
Sbjct: 13 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 72
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQL---MKDREKCFSEAEVRNWCFQVFQGLAY 115
HP+IVKL VI EN + + + E C L +L ++ R+ A + + +Q+ LAY
Sbjct: 73 HPHIVKLIGVITENPV-WIIMEL--CTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 129
Query: 116 MHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRW-----YRAPEV 169
+ + + HRD+ N+LV S D +K+ DFGL+R + T Y +++ + APE
Sbjct: 130 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS---TYYKASKGKLPIKWMAPES 186
Query: 170 LLQSYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKI 211
+ ++S D+W G M E++ ++P F G D I +I
Sbjct: 187 -INFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 228
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 22/224 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAI---SKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
ER +L + +G+G FG V + I + VAIK K L+E ++R+
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQL---MKDREKCFSEAEVRNWCFQVFQGLAY 115
HP+IVKL VI EN + + + E C L +L ++ R+ A + + +Q+ LAY
Sbjct: 67 HPHIVKLIGVITENPV-WIIMEL--CTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 123
Query: 116 MHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRW-----YRAPEV 169
+ + + HRD+ N+LV S D +K+ DFGL+R + T Y +++ + APE
Sbjct: 124 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS---TYYKASKGKLPIKWMAPES 180
Query: 170 LLQSYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKI 211
+ ++S D+W G M E++ ++P F G D I +I
Sbjct: 181 -INFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 222
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 108/214 (50%), Gaps = 16/214 (7%)
Query: 5 KLIKEVGDGTFGSVWRAISKQSGE---VVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
K+ + +G G FG V K G+ VAIK +K Y + L E + + HPN
Sbjct: 10 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 69
Query: 62 IVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
++ L+ V+ ++ + + E+ME +L ++ + F+ ++ + G+ Y+
Sbjct: 70 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN 129
Query: 121 YFHRDLKPENLLVSKDTI-KIADFGLAR---EINSRPPFTEY----VSTRWYRAPEVLLQ 172
Y HR L N+LV+ + + K++DFGL+R + S P +T + RW APE +Q
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW-TAPEA-IQ 187
Query: 173 SYLYSSKVDMWAMGAIMAELITL--RPLFPGTSE 204
++S D+W+ G +M E+++ RP + T++
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ 221
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 132/307 (42%), Gaps = 61/307 (19%)
Query: 8 KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS-HPNIVKLK 66
K +G G+ G+V S Q G VA+K+M + + L E+K L + HPN+++
Sbjct: 21 KILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCD----IALMEIKLLTESDDHPNVIRYY 75
Query: 67 EVIRENDILYFVFEYMECNLYQLMKDRE------KCFSEAEVRNWCFQVFQGLAYMHQRG 120
+ LY E NL L++ + K E + Q+ G+A++H
Sbjct: 76 CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK 135
Query: 121 YFHRDLKPENLLVSKDT--------------IKIADFGLAREINS-----RPPFTEYVST 161
HRDLKP+N+LVS + I I+DFGL ++++S R T
Sbjct: 136 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGT 195
Query: 162 RWYRAPEVLLQSYLYSSK------VDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 215
+RAPE+L +S +K +D+++MG + Y I S
Sbjct: 196 SGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF-------------------YYILSKG 236
Query: 216 GTPTQDSWADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAA 275
P D ++ + R I + ++ + L+ +A LI+ + DP KRPTA
Sbjct: 237 KHPFGDKYSRESNIIRGI-FSLDEMKCLHDRSLIA----EATDLISQMIDHDPLKRPTAM 291
Query: 276 EALQHPF 282
+ L+HP
Sbjct: 292 KVLRHPL 298
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 18/222 (8%)
Query: 2 ERYKLIKEVGDGTFGSVWRAI---SKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
ER +L + +G+G FG V + I + VAIK K L+E ++R+
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQL---MKDREKCFSEAEVRNWCFQVFQGLAY 115
HP+IVKL VI EN + + + E C L +L ++ R+ A + + +Q+ LAY
Sbjct: 70 HPHIVKLIGVITENPV-WIIMEL--CTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 126
Query: 116 MHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY---VSTRWYRAPEVLL 171
+ + + HRD+ N+LV S D +K+ DFGL+R + + +W APE +
Sbjct: 127 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWM-APES-I 184
Query: 172 QSYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKI 211
++S D+W G M E++ ++P F G D I +I
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 225
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 29/259 (11%)
Query: 8 KEVGDGTFGSVWRAISKQSGE---VVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVK 64
K VG G FG V K + VAIK +K Y + L E + + HPNI++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 65 LKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFH 123
L+ V+ ++ + V EYME +L ++ + F+ ++ + G+ Y+ GY H
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 124 RDLKPENLLVSKDTI-KIADFGLAREINSRP--PFTEY---VSTRWYRAPEVLLQSYLYS 177
RDL N+L++ + + K++DFGL+R + P +T + RW +PE + ++
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIAYRK-FT 228
Query: 178 SKVDMWAMGAIMAELITL--RPLFPGTSE-----ADEIYKICSVIGTPTQ------DSWA 224
S D+W+ G ++ E+++ RP + +++ DE Y++ + P D W
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 225 DGLLLARAINYKFPQLVGV 243
R KF Q+V +
Sbjct: 289 KD----RNNRPKFEQIVSI 303
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 29/259 (11%)
Query: 8 KEVGDGTFGSVWRAISKQSGE---VVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVK 64
K VG G FG V K + VAIK +K Y + L E + + HPNI++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 65 LKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFH 123
L+ V+ ++ + V EYME +L ++ + F+ ++ + G+ Y+ GY H
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 124 RDLKPENLLVSKDTI-KIADFGLAREINSRP--PFTEY---VSTRWYRAPEVLLQSYLYS 177
RDL N+L++ + + K++DFGL+R + P +T + RW +PE + ++
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIAYRK-FT 228
Query: 178 SKVDMWAMGAIMAELITL--RPLFPGTSE-----ADEIYKICSVIGTPTQ------DSWA 224
S D+W+ G ++ E+++ RP + +++ DE Y++ + P D W
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 225 DGLLLARAINYKFPQLVGV 243
R KF Q+V +
Sbjct: 289 KD----RNNRPKFEQIVSI 303
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 29/259 (11%)
Query: 8 KEVGDGTFGSVWRAISKQSGE---VVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVK 64
K VG G FG V K + VAIK +K Y + L E + + HPNI++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 65 LKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFH 123
L+ V+ ++ + V EYME +L ++ + F+ ++ + G+ Y+ GY H
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 124 RDLKPENLLVSKDTI-KIADFGLAREINSRP--PFTEY---VSTRWYRAPEVLLQSYLYS 177
RDL N+L++ + + K++DFGL+R + P +T + RW +PE + ++
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIAYRK-FT 228
Query: 178 SKVDMWAMGAIMAELITL--RPLFPGTSE-----ADEIYKICSVIGTPTQ------DSWA 224
S D+W+ G ++ E+++ RP + +++ DE Y++ + P D W
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 225 DGLLLARAINYKFPQLVGV 243
R KF Q+V +
Sbjct: 289 KD----RNNRPKFEQIVSI 303
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 25/209 (11%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
+K I+ +G G FG V++A + G+ IK++K Y+ E+ REVK+L K+ H NIV
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVK---YNNEKAE--REVKALAKLDHVNIV 67
Query: 64 KLK----------EVIREND------ILYFVFEYMECNLYQ--LMKDREKCFSEAEVRNW 105
E +N L+ E+ + + + K R + +
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALEL 127
Query: 106 CFQVFQGLAYMHQRGYFHRDLKPENL-LVSKDTIKIADFGLAREINSRPPFTEYVSTRWY 164
Q+ +G+ Y+H + +RDLKP N+ LV +KI DFGL + + T Y
Sbjct: 128 FEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRY 187
Query: 165 RAPEVLLQSYLYSSKVDMWAMGAIMAELI 193
+PE + S Y +VD++A+G I+AEL+
Sbjct: 188 MSPE-QISSQDYGKEVDLYALGLILAELL 215
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 12/197 (6%)
Query: 8 KEVGDGTFGSVWRAISKQSGE---VVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVK 64
K VG G FG V K + VAIK +K Y + L E + + HPNI++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 65 LKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFH 123
L+ V+ ++ + V EYME +L ++ + F+ ++ + G+ Y+ GY H
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 124 RDLKPENLLVSKDTI-KIADFGLAREINSRP--PFTEY---VSTRWYRAPEVLLQSYLYS 177
RDL N+L++ + + K++DFGL R + P +T + RW +PE + ++
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRW-TSPEAIAYRK-FT 228
Query: 178 SKVDMWAMGAIMAELIT 194
S D+W+ G ++ E+++
Sbjct: 229 SASDVWSYGIVLWEVMS 245
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 8 KEVGDGTFGSVWRAISKQSGE---VVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVK 64
K VG G FG V K + VAIK +K Y + L E + + HPNI++
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 98
Query: 65 LKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFH 123
L+ V+ ++ + V EYME +L ++ + F+ ++ + G+ Y+ GY H
Sbjct: 99 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVH 158
Query: 124 RDLKPENLLVSKDTI-KIADFGLAREINSRP--PFTEY---VSTRWYRAPEVLLQSYLYS 177
RDL N+L++ + + K++DFGL+R + P +T + RW +PE + ++
Sbjct: 159 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIAYRK-FT 216
Query: 178 SKVDMWAMGAIMAELIT 194
S D+W+ G ++ E+++
Sbjct: 217 SASDVWSYGIVLWEVMS 233
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 132/307 (42%), Gaps = 61/307 (19%)
Query: 8 KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS-HPNIVKLK 66
K +G G+ G+V S Q G VA+K+M + + L E+K L + HPN+++
Sbjct: 21 KILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCD----IALMEIKLLTESDDHPNVIRYY 75
Query: 67 EVIRENDILYFVFEYMECNLYQLMKDRE------KCFSEAEVRNWCFQVFQGLAYMHQRG 120
+ LY E NL L++ + K E + Q+ G+A++H
Sbjct: 76 CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK 135
Query: 121 YFHRDLKPENLLVSKDT--------------IKIADFGLAREINS-----RPPFTEYVST 161
HRDLKP+N+LVS + I I+DFGL ++++S R T
Sbjct: 136 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGT 195
Query: 162 RWYRAPEVLLQSYLYSSK------VDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 215
+RAPE+L +S +K +D+++MG + Y I S
Sbjct: 196 SGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF-------------------YYILSKG 236
Query: 216 GTPTQDSWADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAA 275
P D ++ + R I + ++ + L+ +A LI+ + DP KRPTA
Sbjct: 237 KHPFGDKYSRESNIIRGI-FSLDEMKCLHDRSLIA----EATDLISQMIDHDPLKRPTAM 291
Query: 276 EALQHPF 282
+ L+HP
Sbjct: 292 KVLRHPL 298
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 29/259 (11%)
Query: 8 KEVGDGTFGSVWRAISKQSGE---VVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVK 64
K VG G FG V K + VAIK +K Y + L E + + HPNI++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 65 LKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFH 123
L+ V+ ++ + V EYME +L ++ + F+ ++ + G+ Y+ GY H
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 124 RDLKPENLLVSKDTI-KIADFGLAREINSRP--PFTEY---VSTRWYRAPEVLLQSYLYS 177
RDL N+L++ + + K++DFGL+R + P +T + RW +PE + ++
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIAYRK-FT 228
Query: 178 SKVDMWAMGAIMAELITL--RPLFPGTSE-----ADEIYKICSVIGTPTQ------DSWA 224
S D+W+ G ++ E+++ RP + +++ DE Y++ + P D W
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 225 DGLLLARAINYKFPQLVGV 243
R KF Q+V +
Sbjct: 289 KD----RNNRPKFEQIVSI 303
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 29/259 (11%)
Query: 8 KEVGDGTFGSVWRAISKQSGE---VVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVK 64
K VG G FG V K + VAIK +K Y + L E + + HPNI++
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 108
Query: 65 LKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFH 123
L+ V+ ++ + V EYME +L ++ + F+ ++ + G+ Y+ GY H
Sbjct: 109 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVH 168
Query: 124 RDLKPENLLVSKDTI-KIADFGLAREINSRP--PFTEY---VSTRWYRAPEVLLQSYLYS 177
RDL N+L++ + + K++DFGL+R + P +T + RW +PE + ++
Sbjct: 169 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIAYRK-FT 226
Query: 178 SKVDMWAMGAIMAELITL--RPLFPGTSE-----ADEIYKICSVIGTPTQ------DSWA 224
S D+W+ G ++ E+++ RP + +++ DE Y++ + P D W
Sbjct: 227 SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQ 286
Query: 225 DGLLLARAINYKFPQLVGV 243
R KF Q+V +
Sbjct: 287 KD----RNNRPKFEQIVSI 301
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 9/210 (4%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ ++ I E+G G G V++ K SG V+A K + + +RE++ L + + P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 62 IVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR- 119
IV + + E+M+ +L Q++K + E + V +GL Y+ ++
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKH 124
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
HRD+KP N+LV S+ IK+ DFG++ + I+S +V TR Y +PE LQ YS
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPE-RLQGTHYS 181
Query: 178 SKVDMWAMGAIMAELITLR-PLFPGTSEAD 206
+ D+W+MG + E+ R P+ P ++ D
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKED 211
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 12/200 (6%)
Query: 5 KLIKEVGDGTFGSVWRAISKQSGE---VVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
K+ K +G G FG V K G+ VAIK +K Y + L E + + HPN
Sbjct: 11 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 70
Query: 62 IVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
I+ L+ V+ + + + EYME +L ++ + F+ ++ + G+ Y+
Sbjct: 71 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS 130
Query: 121 YFHRDLKPENLLVSKDTI-KIADFGLAREINSRP--PFTEY---VSTRWYRAPEVLLQSY 174
Y HRDL N+LV+ + + K++DFG++R + P +T + RW APE +
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWT-APEAIAYRK 189
Query: 175 LYSSKVDMWAMGAIMAELIT 194
++S D+W+ G +M E+++
Sbjct: 190 -FTSASDVWSYGIVMWEVMS 208
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 8 KEVGDGTFGSVWRAISKQSGE---VVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVK 64
K VG G FG V K + VAIK +K Y + L E + + HPNI++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 65 LKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFH 123
L+ V+ ++ + V EYME +L ++ + F+ ++ + G+ Y+ GY H
Sbjct: 82 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVH 141
Query: 124 RDLKPENLLVSKDTI-KIADFGLAREINSRP--PFTEY---VSTRWYRAPEVLLQSYLYS 177
RDL N+L++ + + K++DFGL+R + P +T + RW +PE + ++
Sbjct: 142 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIAYRK-FT 199
Query: 178 SKVDMWAMGAIMAELIT 194
S D+W+ G ++ E+++
Sbjct: 200 SASDVWSYGIVLWEVMS 216
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 125/310 (40%), Gaps = 68/310 (21%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSHP- 60
++ I +G G FG V +A + AIKK++ EE ++ L EV L ++H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVXLLASLNHQY 63
Query: 61 ------------NIVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCF 107
N VK +++ L+ EY E LY L+ E
Sbjct: 64 VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 108 QVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREIN---------------S 151
Q+ + L+Y+H +G HR+LKP N+ + + +KI DFGLA+ ++ S
Sbjct: 124 QILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 152 RPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKI 211
T + T Y A EVL + Y+ K+D +++G I E I P G + + K+
Sbjct: 184 SDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY--PFSTGXERVNILKKL 241
Query: 212 CSVIGTPTQDSWADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVS--LIASLCSWDPS 269
R+++ +FP NK V +I L DP+
Sbjct: 242 -------------------RSVSIEFPPDF---------DDNKXKVEKKIIRLLIDHDPN 273
Query: 270 KRPTAAEALQ 279
KRP A L
Sbjct: 274 KRPGARTLLN 283
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 119/239 (49%), Gaps = 31/239 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAIS-----KQSGEVVAIK-KMKKKYYSWEECVNLREVKSLR 55
+R L K +G+G FG V A + + V + KM K + ++ +L +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 56 KM--SHPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDR-----EKCF---------- 97
KM H NI+ L ++ LY + EY + NL + ++ R E C+
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 98 SEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFT 156
S ++ + +QV +G+ Y+ + HRDL N+LV++D + KIADFGLAR+I+ +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 157 EYVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ + R + APE L +Y+ + D+W+ G ++ E+ TL +PG +E++K+
Sbjct: 208 KTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELFKL 264
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 12/200 (6%)
Query: 5 KLIKEVGDGTFGSVWRAISKQSGE---VVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
K+ K +G G FG V K G+ VAIK +K Y + L E + + HPN
Sbjct: 17 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 76
Query: 62 IVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
I+ L+ V+ + + + EYME +L ++ + F+ ++ + G+ Y+
Sbjct: 77 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS 136
Query: 121 YFHRDLKPENLLVSKDTI-KIADFGLAREINSRP--PFTEY---VSTRWYRAPEVLLQSY 174
Y HRDL N+LV+ + + K++DFG++R + P +T + RW APE +
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWT-APEAIAYRK 195
Query: 175 LYSSKVDMWAMGAIMAELIT 194
++S D+W+ G +M E+++
Sbjct: 196 -FTSASDVWSYGIVMWEVMS 214
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 17/203 (8%)
Query: 5 KLIKEVGDGTFGSVWRAI-SKQSGEVV--AIKKMKKKYYSWEECVN--LREVKSLRKMSH 59
+L++++GDG+FG V R SG+ V A+K +K S E ++ +REV ++ + H
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 80
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
N+++L V+ + +L ++ + F + + QV +G+ Y+ +
Sbjct: 81 RNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK 140
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYR-------APEVLL 171
+ HRDL NLL+ ++D +KI DFGL R + P ++ + +R APE L
Sbjct: 141 RFIHRDLAARNLLLATRDLVKIGDFGLMRAL---PQNDDHXVMQEHRKVPFAWCAPES-L 196
Query: 172 QSYLYSSKVDMWAMGAIMAELIT 194
++ +S D W G + E+ T
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 22/224 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAI---SKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
ER +L + +G+G FG V + I + VAIK K L+E ++R+
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQL---MKDREKCFSEAEVRNWCFQVFQGLAY 115
HP+IVKL VI EN + + + E C L +L ++ R+ A + + +Q+ LAY
Sbjct: 450 HPHIVKLIGVITENPV-WIIMEL--CTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 506
Query: 116 MHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRW-----YRAPEV 169
+ + + HRD+ N+LV S D +K+ DFGL+R + T Y +++ + APE
Sbjct: 507 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS---TYYKASKGKLPIKWMAPES 563
Query: 170 LLQSYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKI 211
+ ++S D+W G M E++ ++P F G D I +I
Sbjct: 564 -INFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 605
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 131/303 (43%), Gaps = 57/303 (18%)
Query: 8 KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS-HPNIVKLK 66
K +G G+ G+V S Q G VA+K+M + + L E+K L + HPN+++
Sbjct: 39 KILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCD----IALMEIKLLTESDDHPNVIRYY 93
Query: 67 EVIRENDILYFVFEYMECNLYQLMKDRE------KCFSEAEVRNWCFQVFQGLAYMHQRG 120
+ LY E NL L++ + K E + Q+ G+A++H
Sbjct: 94 CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK 153
Query: 121 YFHRDLKPENLLVSKDT--------------IKIADFGLAREINS-----RPPFTEYVST 161
HRDLKP+N+LVS + I I+DFGL ++++S R T
Sbjct: 154 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGT 213
Query: 162 RWYRAPEVLLQSY--LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPT 219
+RAPE+L +S + +D+++MG + Y I S P
Sbjct: 214 SGWRAPELLEESTKRRLTRSIDIFSMGCVF-------------------YYILSKGKHPF 254
Query: 220 QDSWADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
D ++ + R I + ++ + L+ +A LI+ + DP KRPTA + L+
Sbjct: 255 GDKYSRESNIIRGI-FSLDEMKCLHDRSLIA----EATDLISQMIDHDPLKRPTAMKVLR 309
Query: 280 HPF 282
HP
Sbjct: 310 HPL 312
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 118/239 (49%), Gaps = 31/239 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAIS-----KQSGEVVAIK-KMKKKYYSWEECVNLREVKSLR 55
+R L K +G+G FG V A + + V + KM K + ++ +L +
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 80
Query: 56 KM--SHPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDR---------------EKCF 97
KM H NI+ L ++ LY + EY + NL + ++ R E+
Sbjct: 81 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 140
Query: 98 SEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFT 156
S ++ + +QV +G+ Y+ + HRDL N+LV++D + KIADFGLAR+I+ +
Sbjct: 141 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 200
Query: 157 EYVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ + R + APE L +Y+ + D+W+ G ++ E+ TL +PG +E++K+
Sbjct: 201 KTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELFKL 257
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 119/239 (49%), Gaps = 31/239 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAIS-----KQSGEVVAIK-KMKKKYYSWEECVNLREVKSLR 55
+R L K +G+G FG V A + + V + KM K + ++ +L +
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 56 KM--SHPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDR-----EKCF---------- 97
KM H NI+ L ++ LY + EY + NL + ++ R E C+
Sbjct: 73 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 132
Query: 98 SEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFT 156
S ++ + +QV +G+ Y+ + HRDL N+LV++D + KIADFGLAR+I+ +
Sbjct: 133 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 192
Query: 157 EYVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ + R + APE L +Y+ + D+W+ G ++ E+ TL +PG +E++K+
Sbjct: 193 KTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELFKL 249
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 118/239 (49%), Gaps = 31/239 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAIS-----KQSGEVVAIK-KMKKKYYSWEECVNLREVKSLR 55
+R L K +G+G FG V A + + V + KM K + ++ +L +
Sbjct: 20 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 79
Query: 56 KM--SHPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDR---------------EKCF 97
KM H NI+ L ++ LY + EY + NL + ++ R E+
Sbjct: 80 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 139
Query: 98 SEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFT 156
S ++ + +QV +G+ Y+ + HRDL N+LV++D + KIADFGLAR+I+ +
Sbjct: 140 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 199
Query: 157 EYVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ + R + APE L +Y+ + D+W+ G ++ E+ TL +PG +E++K+
Sbjct: 200 KTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELFKL 256
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 118/239 (49%), Gaps = 31/239 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAIS-----KQSGEVVAIK-KMKKKYYSWEECVNLREVKSLR 55
+R L K +G+G FG V A + + V + KM K + ++ +L +
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128
Query: 56 KM--SHPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDR---------------EKCF 97
KM H NI+ L ++ LY + EY + NL + ++ R E+
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188
Query: 98 SEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFT 156
S ++ + +QV +G+ Y+ + HRDL N+LV++D + KIADFGLAR+I+ +
Sbjct: 189 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 248
Query: 157 EYVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ + R + APE L +Y+ + D+W+ G ++ E+ TL +PG +E++K+
Sbjct: 249 KTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELFKL 305
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 131/303 (43%), Gaps = 57/303 (18%)
Query: 8 KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS-HPNIVKLK 66
K +G G+ G+V S Q G VA+K+M + + L E+K L + HPN+++
Sbjct: 39 KILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCD----IALMEIKLLTESDDHPNVIRYY 93
Query: 67 EVIRENDILYFVFEYMECNLYQLMKDRE------KCFSEAEVRNWCFQVFQGLAYMHQRG 120
+ LY E NL L++ + K E + Q+ G+A++H
Sbjct: 94 CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK 153
Query: 121 YFHRDLKPENLLVSKDT--------------IKIADFGLAREINS-----RPPFTEYVST 161
HRDLKP+N+LVS + I I+DFGL ++++S R T
Sbjct: 154 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGT 213
Query: 162 RWYRAPEVLLQSY--LYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPT 219
+RAPE+L +S + +D+++MG + Y I S P
Sbjct: 214 SGWRAPELLEESTKRRLTRSIDIFSMGCVF-------------------YYILSKGKHPF 254
Query: 220 QDSWADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQ 279
D ++ + R I + ++ + L+ +A LI+ + DP KRPTA + L+
Sbjct: 255 GDKYSRESNIIRGI-FSLDEMKCLHDRSLIA----EATDLISQMIDHDPLKRPTAMKVLR 309
Query: 280 HPF 282
HP
Sbjct: 310 HPL 312
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 6/198 (3%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ ++ I E+G G G V++ K SG V+A K + + +RE++ L + + P
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 62 IVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR- 119
IV + + E+M+ +L Q++K + E + V +GL Y+ ++
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKH 127
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSS 178
HRD+KP N+LV S+ IK+ DFG++ ++ E+V TR Y +PE LQ YS
Sbjct: 128 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMA-NEFVGTRSYMSPE-RLQGTHYSV 185
Query: 179 KVDMWAMGAIMAELITLR 196
+ D+W+MG + E+ R
Sbjct: 186 QSDIWSMGLSLVEMAVGR 203
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 118/239 (49%), Gaps = 31/239 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAIS-----KQSGEVVAIK-KMKKKYYSWEECVNLREVKSLR 55
+R L K +G+G FG V A + + V + KM K + ++ +L +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 56 KM--SHPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDR---------------EKCF 97
KM H NI+ L ++ LY + EY + NL + ++ R E+
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 147
Query: 98 SEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFT 156
S ++ + +QV +G+ Y+ + HRDL N+LV++D + KIADFGLAR+I+ +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 157 EYVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ + R + APE L +Y+ + D+W+ G ++ E+ TL +PG +E++K+
Sbjct: 208 KTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELFKL 264
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 22/224 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAI---SKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS 58
ER +L + +G+G FG V + I + VAIK K L+E ++R+
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQL---MKDREKCFSEAEVRNWCFQVFQGLAY 115
HP+IVKL VI EN + + + E C L +L ++ R+ A + + +Q+ LAY
Sbjct: 450 HPHIVKLIGVITENPV-WIIMEL--CTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 506
Query: 116 MHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTEYVSTRW-----YRAPEV 169
+ + + HRD+ N+LVS D +K+ DFGL+R + T Y +++ + APE
Sbjct: 507 LESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDS---TYYKASKGKLPIKWMAPES 563
Query: 170 LLQSYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKI 211
+ ++S D+W G M E++ ++P F G D I +I
Sbjct: 564 -INFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 605
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 19/204 (9%)
Query: 5 KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMS 58
+L++++GDG+FG V W A S ++ V A+K +K S E ++ +REV ++ +
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
H N+++L V+ + +L ++ + F + + QV +G+ Y+
Sbjct: 70 HRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 119 RGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYR-------APEVL 170
+ + HRDL NLL+ ++D +KI DFGL R + P ++ + +R APE
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRAL---PQNDDHXVMQEHRKVPFAWCAPES- 185
Query: 171 LQSYLYSSKVDMWAMGAIMAELIT 194
L++ +S D W G + E+ T
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 118/239 (49%), Gaps = 31/239 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAIS-----KQSGEVVAIK-KMKKKYYSWEECVNLREVKSLR 55
+R L K +G+G FG V A + + V + KM K + ++ +L +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 56 KM--SHPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDRE---------------KCF 97
KM H NI+ L ++ LY + EY + NL + ++ RE +
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQL 147
Query: 98 SEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFT 156
S ++ + +QV +G+ Y+ + HRDL N+LV++D + KIADFGLAR+I+ +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 157 EYVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ + R + APE L +Y+ + D+W+ G ++ E+ TL +PG +E++K+
Sbjct: 208 KTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELFKL 264
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
+K I+ +G G FG V++A + G+ I+++K Y+ E+ REVK+L K+ H NIV
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVK---YNNEKAE--REVKALAKLDHVNIV 68
Query: 64 KLKEV-------IRENDILYFVFEYMECNLYQLMKDREKCF-------SEAEVRNWCF-- 107
+D +Y N + + KC + + W
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 108 ---------------QVFQGLAYMHQRGYFHRDLKPENL-LVSKDTIKIADFGLAREINS 151
Q+ +G+ Y+H + HRDLKP N+ LV +KI DFGL + +
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKN 188
Query: 152 RPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELI 193
T T Y +PE + S Y +VD++A+G I+AEL+
Sbjct: 189 DGKRTRSKGTLRYMSPE-QISSQDYGKEVDLYALGLILAELL 229
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 117/239 (48%), Gaps = 31/239 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAIS-----KQSGEVVAIK-KMKKKYYSWEECVNLREVKSLR 55
+R L K +G+G FG V A + + V + KM K + ++ +L +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 56 KM--SHPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDR---------------EKCF 97
KM H NI+ L ++ LY + EY + NL + ++ R E+
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQL 147
Query: 98 SEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFT 156
S ++ + +QV +G+ Y+ + HRDL N+LV++D + KIADFGLAR+I+
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXK 207
Query: 157 EYVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ + R + APE L +Y+ + D+W+ G ++ E+ TL +PG +E++K+
Sbjct: 208 KTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELFKL 264
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 118/239 (49%), Gaps = 31/239 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAIS-----KQSGEVVAIK-KMKKKYYSWEECVNLREVKSLR 55
+R L K +G+G FG V A + + V + KM K + ++ +L +
Sbjct: 17 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 76
Query: 56 KM--SHPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDR---------------EKCF 97
KM H NI+ L ++ LY + EY + NL + ++ R E+
Sbjct: 77 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 136
Query: 98 SEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFT 156
S ++ + +QV +G+ Y+ + HRDL N+LV++D + KIADFGLAR+I+ +
Sbjct: 137 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 196
Query: 157 EYVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ + R + APE L +Y+ + D+W+ G ++ E+ TL +PG +E++K+
Sbjct: 197 KTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELFKL 253
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 19/204 (9%)
Query: 5 KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMS 58
+L++++GDG+FG V W A S ++ V A+K +K S E ++ +REV ++ +
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
H N+++L V+ + +L ++ + F + + QV +G+ Y+
Sbjct: 80 HRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 139
Query: 119 RGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYR-------APEVL 170
+ + HRDL NLL+ ++D +KI DFGL R + P ++ + +R APE
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRAL---PQNDDHYVMQEHRKVPFAWCAPES- 195
Query: 171 LQSYLYSSKVDMWAMGAIMAELIT 194
L++ +S D W G + E+ T
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS--WEECVNLR-EVKSLRKMSHPNIVKLK 66
+G G FG V+RA G+ VA+K + + N+R E K + HPNI+ L+
Sbjct: 15 IGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 67 EVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGY---FH 123
V + L V E+ + ++ + V NW Q+ +G+ Y+H H
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILV-NWAVQIARGMNYLHDEAIVPIIH 131
Query: 124 RDLKPENLLV---------SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSY 174
RDLK N+L+ S +KI DFGLARE + + + W APEV +++
Sbjct: 132 RDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWM-APEV-IRAS 189
Query: 175 LYSSKVDMWAMGAIMAELITLRPLFPG 201
++S D+W+ G ++ EL+T F G
Sbjct: 190 MFSKGSDVWSYGVLLWELLTGEVPFRG 216
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 100/197 (50%), Gaps = 8/197 (4%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVI 69
+G GT+G V+ + +AIK++ ++ + + ++ E+ + + H NIV+
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLH-EEIALHKHLKHKNIVQYLGSF 74
Query: 70 RENDILYFVFEYMEC-NLYQLMKDREKCFSEAE--VRNWCFQVFQGLAYMHQRGYFHRDL 126
EN + E + +L L++ + + E + + Q+ +GL Y+H HRD+
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 134
Query: 127 KPENLLVS--KDTIKIADFGLAREINSRPPFTE-YVSTRWYRAPEVLLQS-YLYSSKVDM 182
K +N+L++ +KI+DFG ++ + P TE + T Y APE++ + Y D+
Sbjct: 135 KGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADI 194
Query: 183 WAMGAIMAELITLRPLF 199
W++G + E+ T +P F
Sbjct: 195 WSLGCTIIEMATGKPPF 211
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 118/239 (49%), Gaps = 31/239 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAIS------KQSGEVVAIKKMKKKYYSWEECVNLREVKSLR 55
++ L K +G+G FG V A + K V KM K + ++ +L +
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 56 KM--SHPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDR---------------EKCF 97
KM H NI+ L ++ LY + EY + NL + ++ R E+
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 98 SEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFT 156
+ ++ + +Q+ +G+ Y+ + HRDL N+LV+++ + KIADFGLAR+IN+ +
Sbjct: 201 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 260
Query: 157 EYVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ + R + APE L +Y+ + D+W+ G +M E+ TL +PG +E++K+
Sbjct: 261 KTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKL 317
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 19/204 (9%)
Query: 5 KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMS 58
+L++++GDG+FG V W A S ++ V A+K +K S E ++ +REV ++ +
Sbjct: 15 RLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
H N+++L V+ + +L ++ + F + + QV +G+ Y+
Sbjct: 74 HRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 133
Query: 119 RGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYR-------APEVL 170
+ + HRDL NLL+ ++D +KI DFGL R + P ++ + +R APE
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRAL---PQNDDHYVMQEHRKVPFAWCAPES- 189
Query: 171 LQSYLYSSKVDMWAMGAIMAELIT 194
L++ +S D W G + E+ T
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 95/194 (48%), Gaps = 17/194 (8%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVI 69
VG G+FG V R KQ+G A+KK++ + + EE V + +S P IV L +
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELV------ACAGLSSPRIVPLYGAV 135
Query: 70 RENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKP 128
RE + E +E +L QL+K + C E + Q +GL Y+H R H D+K
Sbjct: 136 REGPWVNIFMELLEGGSLGQLIK-QMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKA 194
Query: 129 ENLLVSKDTIKIA--DFGLA-----REINSRPPFTEYV-STRWYRAPEVLLQSYLYSSKV 180
+N+L+S D + A DFG A + +Y+ T + APEV++ +KV
Sbjct: 195 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC-DAKV 253
Query: 181 DMWAMGAIMAELIT 194
D+W+ +M ++
Sbjct: 254 DIWSSCCMMLHMLN 267
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 19/204 (9%)
Query: 5 KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMS 58
+L++++GDG+FG V W A S ++ V A+K +K S E ++ +REV ++ +
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
H N+++L V+ + +L ++ + F + + QV +G+ Y+
Sbjct: 70 HRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 119 RGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYR-------APEVL 170
+ + HRDL NLL+ ++D +KI DFGL R + P ++ + +R APE
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRAL---PQNDDHYVMQEHRKVPFAWCAPES- 185
Query: 171 LQSYLYSSKVDMWAMGAIMAELIT 194
L++ +S D W G + E+ T
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 117/239 (48%), Gaps = 31/239 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAIS------KQSGEVVAIKKMKKKYYSWEECVNLREVKSLR 55
++ L K +G+G FG V A + K V KM K + ++ +L +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 56 KM--SHPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDR---------------EKCF 97
KM H NI+ L ++ LY + EY + NL + ++ R E+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 98 SEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFT 156
+ ++ + +Q+ +G+ Y+ + HRDL N+LV+++ + KIADFGLAR+IN+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 157 EYVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ R + APE L +Y+ + D+W+ G +M E+ TL +PG +E++K+
Sbjct: 215 NTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKL 271
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 19/204 (9%)
Query: 5 KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMS 58
+L++++GDG+FG V W A S ++ V A+K +K S E ++ +REV ++ +
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
H N+++L V+ + +L ++ + F + + QV +G+ Y+
Sbjct: 70 HRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 119 RGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYR-------APEVL 170
+ + HRDL NLL+ ++D +KI DFGL R + P ++ + +R APE
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRAL---PQNDDHYVMQEHRKVPFAWCAPES- 185
Query: 171 LQSYLYSSKVDMWAMGAIMAELIT 194
L++ +S D W G + E+ T
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 118/239 (49%), Gaps = 31/239 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAIS------KQSGEVVAIKKMKKKYYSWEECVNLREVKSLR 55
++ L K +G+G FG V A + K V KM K + ++ +L +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 56 KM--SHPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDR---------------EKCF 97
KM H NI+ L ++ LY + EY + NL + ++ R E+
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 98 SEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFT 156
+ ++ + +Q+ +G+ Y+ + HRDL N+LV+++ + KIADFGLAR+IN+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 157 EYVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ + R + APE L +Y+ + D+W+ G +M E+ TL +PG +E++K+
Sbjct: 215 KTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKL 271
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 118/239 (49%), Gaps = 31/239 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAIS------KQSGEVVAIKKMKKKYYSWEECVNLREVKSLR 55
++ L K +G+G FG V A + K V KM K + ++ +L +
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 56 KM--SHPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDR---------------EKCF 97
KM H NI+ L ++ LY + EY + NL + ++ R E+
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 98 SEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFT 156
+ ++ + +Q+ +G+ Y+ + HRDL N+LV+++ + KIADFGLAR+IN+ +
Sbjct: 147 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 206
Query: 157 EYVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ + R + APE L +Y+ + D+W+ G +M E+ TL +PG +E++K+
Sbjct: 207 KTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKL 263
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 118/239 (49%), Gaps = 31/239 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAIS------KQSGEVVAIKKMKKKYYSWEECVNLREVKSLR 55
++ L K +G+G FG V A + K V KM K + ++ +L +
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 56 KM--SHPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDR---------------EKCF 97
KM H NI+ L ++ LY + EY + NL + ++ R E+
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 98 SEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFT 156
+ ++ + +Q+ +G+ Y+ + HRDL N+LV+++ + KIADFGLAR+IN+ +
Sbjct: 144 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 203
Query: 157 EYVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ + R + APE L +Y+ + D+W+ G +M E+ TL +PG +E++K+
Sbjct: 204 KTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKL 260
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 118/239 (49%), Gaps = 31/239 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAIS------KQSGEVVAIKKMKKKYYSWEECVNLREVKSLR 55
++ L K +G+G FG V A + K V KM K + ++ +L +
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 56 KM--SHPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDR---------------EKCF 97
KM H NI+ L ++ LY + EY + NL + ++ R E+
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 98 SEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFT 156
+ ++ + +Q+ +G+ Y+ + HRDL N+LV+++ + KIADFGLAR+IN+ +
Sbjct: 142 TFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYK 201
Query: 157 EYVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ + R + APE L +Y+ + D+W+ G +M E+ TL +PG +E++K+
Sbjct: 202 KTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKL 258
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 122/259 (47%), Gaps = 29/259 (11%)
Query: 8 KEVGDGTFGSVWRAISKQSGE---VVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVK 64
K VG G FG V K + VAIK +K Y + L E + + HPNI++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 65 LKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFH 123
L+ V+ ++ + V EYME +L ++ + F+ ++ + G+ Y+ G+ H
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVH 170
Query: 124 RDLKPENLLVSKDTI-KIADFGLAREINSRP--PFTEY---VSTRWYRAPEVLLQSYLYS 177
RDL N+L++ + + K++DFGL+R + P +T + RW +PE + ++
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIAYRK-FT 228
Query: 178 SKVDMWAMGAIMAELITL--RPLFPGTSE-----ADEIYKICSVIGTPTQ------DSWA 224
S D+W+ G ++ E+++ RP + +++ DE Y++ + P D W
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 225 DGLLLARAINYKFPQLVGV 243
R KF Q+V +
Sbjct: 289 KD----RNNRPKFEQIVSI 303
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVI 69
VG G+FG V R KQ+G A+KK++ + + EE V + +S P IV L +
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELV------ACAGLSSPRIVPLYGAV 119
Query: 70 RENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKP 128
RE + E +E L QL+K + C E + Q +GL Y+H R H D+K
Sbjct: 120 REGPWVNIFMELLEGGSLGQLIK-QMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKA 178
Query: 129 ENLLVSKDTIKIA--DFGLA-----REINSRPPFTEYV-STRWYRAPEVLLQSYLYSSKV 180
+N+L+S D + A DFG A + +Y+ T + APEV++ +KV
Sbjct: 179 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC-DAKV 237
Query: 181 DMWAMGAIMAELIT 194
D+W+ +M ++
Sbjct: 238 DIWSSCCMMLHMLN 251
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 118/239 (49%), Gaps = 31/239 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAIS------KQSGEVVAIKKMKKKYYSWEECVNLREVKSLR 55
++ L K +G+G FG V A + K V KM K + ++ +L +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 56 KM--SHPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDR---------------EKCF 97
KM H NI+ L ++ LY + EY + NL + ++ R E+
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 98 SEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFT 156
+ ++ + +Q+ +G+ Y+ + HRDL N+LV+++ + KIADFGLAR+IN+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 157 EYVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ + R + APE L +Y+ + D+W+ G +M E+ TL +PG +E++K+
Sbjct: 215 KTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKL 271
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 19/204 (9%)
Query: 5 KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMS 58
+L++++GDG+FG V W A S ++ V A+K +K S E ++ +REV ++ +
Sbjct: 15 RLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 59 HPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
H N+++L V+ + +L ++ + F + + QV +G+ Y+
Sbjct: 74 HRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 133
Query: 119 RGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTRWYR-------APEVL 170
+ + HRDL NLL+ ++D +KI DFGL R + P ++ + +R APE
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRAL---PQNDDHYVMQEHRKVPFAWCAPES- 189
Query: 171 LQSYLYSSKVDMWAMGAIMAELIT 194
L++ +S D W G + E+ T
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 100/197 (50%), Gaps = 8/197 (4%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVI 69
+G GT+G V+ + +AIK++ ++ + + ++ E+ + + H NIV+
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLH-EEIALHKHLKHKNIVQYLGSF 88
Query: 70 RENDILYFVFEYMEC-NLYQLMKDREKCFSEAE--VRNWCFQVFQGLAYMHQRGYFHRDL 126
EN + E + +L L++ + + E + + Q+ +GL Y+H HRD+
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 148
Query: 127 KPENLLVS--KDTIKIADFGLAREINSRPPFTE-YVSTRWYRAPEVLLQS-YLYSSKVDM 182
K +N+L++ +KI+DFG ++ + P TE + T Y APE++ + Y D+
Sbjct: 149 KGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADI 208
Query: 183 WAMGAIMAELITLRPLF 199
W++G + E+ T +P F
Sbjct: 209 WSLGCTIIEMATGKPPF 225
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 6 LIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKL 65
L +++G G FG V+ + +VA+K ++ + L+E + L++ SHPNIV+L
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 66 KEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHR 124
V + +Y V E ++ + ++ + G+ Y+ + HR
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHR 237
Query: 125 DLKPENLLVS-KDTIKIADFGLARE----INSRPPFTEYVSTRWYRAPEVLLQSYLYSSK 179
DL N LV+ K+ +KI+DFG++RE + + V +W APE L YSS+
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWT-APEALNYGR-YSSE 295
Query: 180 VDMWAMGAIMAELITL 195
D+W+ G ++ E +L
Sbjct: 296 SDVWSFGILLWETFSL 311
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 127/295 (43%), Gaps = 43/295 (14%)
Query: 1 MERYKLIKEV-GDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSL--RKM 57
++ YK+ +V G G G V + +K++ E A+K + ++C R L R
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXL-------QDCPKARREVELHWRAS 112
Query: 58 SHPNIVKLKEVIRE----NDILYFVFEYMECN-LYQLMKDR-EKCFSEAEVRNWCFQVFQ 111
P+IV++ +V L V E ++ L+ ++DR ++ F+E E + +
Sbjct: 113 QCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGE 172
Query: 112 GLAYMHQRGYFHRDLKPENLLVSKD----TIKIADFGLAREINSRPPFTEYVSTRWYRAP 167
+ Y+H HRD+KPENLL + +K+ DFG A+E S T T +Y AP
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 232
Query: 168 EVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGL 227
EVL Y D W++G I L+ P F Y + +P +
Sbjct: 233 EVLGPEK-YDKSCDXWSLGVIXYILLCGYPPF---------YSNHGLAISPGXKT----- 277
Query: 228 LLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
R Y+FP +S ++ LI +L +P++R T E HP+
Sbjct: 278 -RIRXGQYEFPNPEWSEVS-------EEVKXLIRNLLKTEPTQRXTITEFXNHPW 324
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 117/239 (48%), Gaps = 31/239 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAIS------KQSGEVVAIKKMKKKYYSWEECVNLREVKSLR 55
++ L K +G+G FG V A + K V KM K + ++ +L +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 56 KM--SHPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDR---------------EKCF 97
KM H NI+ L ++ LY + EY + NL + ++ R E+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 98 SEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFT 156
+ ++ + +Q+ +G+ Y+ + HRDL N+LV+++ + KIADFGLAR+IN+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 157 EYVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ + R + APE L +Y+ + D+W+ G +M E+ TL +PG +E++K+
Sbjct: 215 KTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKL 271
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 117/239 (48%), Gaps = 31/239 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAIS------KQSGEVVAIKKMKKKYYSWEECVNLREVKSLR 55
++ L K +G+G FG V A + K V KM K + ++ +L +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 56 KM--SHPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDR---------------EKCF 97
KM H NI+ L ++ LY + EY + NL + ++ R E+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 98 SEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFT 156
+ ++ + +Q+ +G+ Y+ + HRDL N+LV+++ + KIADFGLAR+IN+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 157 EYVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ + R + APE L +Y+ + D+W+ G +M E+ TL +PG +E++K+
Sbjct: 215 KTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKL 271
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 110/207 (53%), Gaps = 15/207 (7%)
Query: 1 MERYKLIKEVGDGTFGSVW--RAISKQ-SGEVVAIKKMKK-----KYYSWEECVNLREVK 52
+E ++L+K +G G +G V+ R IS +G++ A+K +KK K + E R+V
Sbjct: 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 112
Query: 53 SLRKMSHPNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQ 111
+ S P +V L + L+ + +Y+ L+ + RE+ F+E EV+ + ++
Sbjct: 113 EHIRQS-PFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER-FTEHEVQIYVGEIVL 170
Query: 112 GLAYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREI--NSRPPFTEYVSTRWYRAPE 168
L ++H+ G +RD+K EN+L+ S + + DFGL++E + ++ T Y AP+
Sbjct: 171 ALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPD 230
Query: 169 VLLQSYLYSSK-VDMWAMGAIMAELIT 194
++ K VD W++G +M EL+T
Sbjct: 231 IVRGGDSGHDKAVDWWSLGVLMYELLT 257
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 6 LIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKL 65
L +++G G FG V+ + +VA+K ++ + L+E + L++ SHPNIV+L
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 66 KEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHR 124
V + +Y V E ++ + ++ + G+ Y+ + HR
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHR 237
Query: 125 DLKPENLLVS-KDTIKIADFGLARE----INSRPPFTEYVSTRWYRAPEVLLQSYLYSSK 179
DL N LV+ K+ +KI+DFG++RE + + V +W APE L YSS+
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWT-APEALNYGR-YSSE 295
Query: 180 VDMWAMGAIMAELITL 195
D+W+ G ++ E +L
Sbjct: 296 SDVWSFGILLWETFSL 311
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 118/239 (49%), Gaps = 31/239 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAIS------KQSGEVVAIKKMKKKYYSWEECVNLREVKSLR 55
++ L K +G+G FG V A + K V KM K + ++ +L +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 56 KM--SHPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDR---------------EKCF 97
KM H NI+ L ++ LY + EY + NL + ++ R E+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 98 SEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFT 156
+ ++ + +Q+ +G+ Y+ + HRDL N+LV+++ + +IADFGLAR+IN+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYK 214
Query: 157 EYVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ + R + APE L +Y+ + D+W+ G +M E+ TL +PG +E++K+
Sbjct: 215 KTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKL 271
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 9/207 (4%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+ ++ I E+G G G V++ K SG V+A K + + +RE++ L + + P
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 62 IVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR- 119
IV + + E+M+ +L Q++K + E + V +GL Y+ ++
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKH 143
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
HRD+KP N+LV S+ IK+ DFG++ + I+S +V TR Y +PE LQ YS
Sbjct: 144 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPE-RLQGTHYS 200
Query: 178 SKVDMWAMGAIMAELITLR-PLFPGTS 203
+ D+W+MG + E+ R P+ G+
Sbjct: 201 VQSDIWSMGLSLVEMAVGRYPIGSGSG 227
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 17/194 (8%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVI 69
+G G+FG V R KQ+G A+KK++ + + EE + + ++ P IV L +
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEE------LMACAGLTSPRIVPLYGAV 154
Query: 70 RENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKP 128
RE + E +E +L QL+K+ + C E + Q +GL Y+H R H D+K
Sbjct: 155 REGPWVNIFMELLEGGSLGQLVKE-QGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKA 213
Query: 129 ENLLVSKDTIKIA--DFGLA-----REINSRPPFTEYV-STRWYRAPEVLLQSYLYSSKV 180
+N+L+S D A DFG A + +Y+ T + APEV+L +KV
Sbjct: 214 DNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSC-DAKV 272
Query: 181 DMWAMGAIMAELIT 194
D+W+ +M ++
Sbjct: 273 DVWSSCCMMLHMLN 286
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 33/220 (15%)
Query: 7 IKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY-SWEECVNLREVKSLRKMS-HPNIVK 64
++++G G FGSV++ + + G + AIK+ KK S +E LREV + + H ++V+
Sbjct: 12 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 71
Query: 65 LKEVIRENDILYFVFEYMECN---LYQLMKDREKC---FSEAEVRNWCFQVFQGLAYMHQ 118
E+D + EY CN L + + + F EAE+++ QV +GL Y+H
Sbjct: 72 YFSAWAEDDHMLIQNEY--CNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 129
Query: 119 RGYFHRDLKPENLLVSKDTI--------------------KIADFGLAREINSRPPFTEY 158
H D+KP N+ +S+ +I KI D G I+S P E
Sbjct: 130 MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS--PQVEE 187
Query: 159 VSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPL 198
+R+ A EVL ++Y + K D++A+ + PL
Sbjct: 188 GDSRFL-ANEVLQENYTHLPKADIFALALTVVXAAGAEPL 226
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVI 69
+G G+FG V R KQ+G A+KK++ + + EE V + +S P IV L +
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELV------ACAGLSSPRIVPLYGAV 133
Query: 70 RENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKP 128
RE + E +E L QL+K + C E + Q +GL Y+H R H D+K
Sbjct: 134 REGPWVNIFMELLEGGSLGQLIK-QMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKA 192
Query: 129 ENLLVSKDTIKIA--DFGLA-----REINSRPPFTEYV-STRWYRAPEVLLQSYLYSSKV 180
+N+L+S D + A DFG A + +Y+ T + APEV++ +KV
Sbjct: 193 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC-DAKV 251
Query: 181 DMWAMGAIMAELIT 194
D+W+ +M ++
Sbjct: 252 DIWSSCCMMLHMLN 265
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 9/213 (4%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN-- 61
+ + +G G+FG V + K + E+ A+K +KK ++ V V+ R ++ P
Sbjct: 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEK-RVLALPGKP 80
Query: 62 --IVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
+ +L + D LYFV EY+ + F E + ++ GL ++ +
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 140
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYLYS 177
G +RDLK +N+++ S+ IKIADFG+ +E I + T Y APE++ Y
Sbjct: 141 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQ-PYG 199
Query: 178 SKVDMWAMGAIMAELITLRPLFPGTSEADEIYK 210
VD WA G ++ E++ + F G E DE+++
Sbjct: 200 KSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQ 231
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 21/196 (10%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVI 69
+G G+FG V R KQ+G A+KK++ + + EE + + ++ P IV L +
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEE------LMACAGLTSPRIVPLYGAV 135
Query: 70 RENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKP 128
RE + E +E +L QL+K+ + C E + Q +GL Y+H R H D+K
Sbjct: 136 REGPWVNIFMELLEGGSLGQLVKE-QGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKA 194
Query: 129 ENLLVSKDTIKIA--DFGLAREINSRPP-------FTEYV-STRWYRAPEVLLQSYLYSS 178
+N+L+S D A DFG A + +P +Y+ T + APEV+L +
Sbjct: 195 DNVLLSSDGSHAALCDFGHA--VCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSC-DA 251
Query: 179 KVDMWAMGAIMAELIT 194
KVD+W+ +M ++
Sbjct: 252 KVDVWSSCCMMLHMLN 267
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 144/327 (44%), Gaps = 57/327 (17%)
Query: 6 LIKEVGDGTFGSVWRAISKQSGEVVAIKKMK--KKYYSWEECVNLREVKSLRKMSHPNIV 63
+I+++GDGTFG V + + A+K ++ KKY + E L+K+ + +I
Sbjct: 39 VIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKI----EADILKKIQNDDIN 94
Query: 64 KLKEVIRENDILYF-----VFEYMECNLYQLM-KDREKCFSEAEVRNWCFQVFQGLAYMH 117
V +Y+ +FE + +LY+++ ++ F +++ +C ++ + L Y+
Sbjct: 95 NNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR 154
Query: 118 QRGYFHRDLKPENLLV-------------------------SKDT-IKIADFGLAREINS 151
+ H DLKPEN+L+ +K T IK+ DFG A +
Sbjct: 155 KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD 214
Query: 152 RPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKI 211
++TR YRAPEV+L + + DMW+ G ++AEL T LF + + +
Sbjct: 215 Y--HGSIINTRQYRAPEVIL-NLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMM 271
Query: 212 CSVI----------GTPTQDSW---ADGLLLA---RAINYKFPQLVGVPLSVLMPSANKD 255
S+I T T S D L LA A + + V L + ++
Sbjct: 272 ESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHEL 331
Query: 256 AVSLIASLCSWDPSKRPTAAEALQHPF 282
+ S+ DP+ RP+ AE L+H F
Sbjct: 332 FCDFLYSILQIDPTLRPSPAELLKHKF 358
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 121/259 (46%), Gaps = 29/259 (11%)
Query: 8 KEVGDGTFGSVWRAISKQSGE---VVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVK 64
K VG G FG V K + VAIK +K Y + L E + + HPNI++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 65 LKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFH 123
L+ V+ ++ + V E ME +L ++ + F+ ++ + G+ Y+ GY H
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 124 RDLKPENLLVSKDTI-KIADFGLAREINSRP--PFTEY---VSTRWYRAPEVLLQSYLYS 177
RDL N+L++ + + K++DFGL+R + P +T + RW +PE + ++
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIAYRK-FT 228
Query: 178 SKVDMWAMGAIMAELITL--RPLFPGTSE-----ADEIYKICSVIGTPTQ------DSWA 224
S D+W+ G ++ E+++ RP + +++ DE Y++ + P D W
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 225 DGLLLARAINYKFPQLVGV 243
R KF Q+V +
Sbjct: 289 KD----RNNRPKFEQIVSI 303
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 99/197 (50%), Gaps = 12/197 (6%)
Query: 8 KEVGDGTFGSVWRAISKQSGE---VVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVK 64
K VG G FG V K + VAIK +K Y + L E + + HPNI++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 65 LKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFH 123
L+ V+ ++ + V E ME +L ++ + F+ ++ + G+ Y+ GY H
Sbjct: 82 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVH 141
Query: 124 RDLKPENLLVSKDTI-KIADFGLAREINSRP--PFTEY---VSTRWYRAPEVLLQSYLYS 177
RDL N+L++ + + K++DFGL+R + P +T + RW +PE + ++
Sbjct: 142 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIAYRK-FT 199
Query: 178 SKVDMWAMGAIMAELIT 194
S D+W+ G ++ E+++
Sbjct: 200 SASDVWSYGIVLWEVMS 216
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 117/239 (48%), Gaps = 31/239 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAIS------KQSGEVVAIKKMKKKYYSWEECVNLREVKSLR 55
++ L K +G+G FG V A + K V KM K + ++ +L +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 56 KM--SHPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDR---------------EKCF 97
KM H NI+ L ++ LY + Y + NL + ++ R E+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 98 SEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFT 156
+ ++ + +Q+ +G+ Y+ + HRDL N+LV+++ + KIADFGLAR+IN+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 157 EYVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ + R + APE L +Y+ + D+W+ G +M E+ TL +PG +E++K+
Sbjct: 215 KTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKL 271
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 12/200 (6%)
Query: 5 KLIKEVGDGTFGSVWRAISKQSGE---VVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
K+ K +G G FG V K G+ VAIK +K Y + L E + + HPN
Sbjct: 32 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 91
Query: 62 IVKLKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
I+ L+ V+ + + + EYME +L ++ + F+ ++ + G+ Y+
Sbjct: 92 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS 151
Query: 121 YFHRDLKPENLLVSKDTI-KIADFGLAREINSRP--PFTEY---VSTRWYRAPEVLLQSY 174
HRDL N+LV+ + + K++DFG++R + P +T + RW APE +
Sbjct: 152 AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWT-APEAIAYRK 210
Query: 175 LYSSKVDMWAMGAIMAELIT 194
++S D+W+ G +M E+++
Sbjct: 211 -FTSASDVWSYGIVMWEVMS 229
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 133/309 (43%), Gaps = 61/309 (19%)
Query: 2 ERYKLIKEVGDGTFGSVWRA----ISKQSG-EVVAIKKMKKKYYSWEECVNLREVKSLRK 56
+R KL K +G G FG V A I K + VA+K +K+ E + E+K L
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 123
Query: 57 MSHP-NIVKL-KEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRN--------- 104
+ H N+V L + L + E+ + NL ++ + F +V
Sbjct: 124 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 183
Query: 105 ------WCFQVFQGLAYMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTE 157
+ FQV +G+ ++ R HRDL N+L+S K+ +KI DFGLAR+I P +
Sbjct: 184 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 243
Query: 158 YVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPL-FPGTSEADEIYKICS 213
R + APE + +Y+ + D+W+ G ++ E+ +L +PG +E C
Sbjct: 244 KGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCR 299
Query: 214 VIGTPTQDSWADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSW--DPSKR 271
+ T+ RA +Y P++ L W +PS+R
Sbjct: 300 RLKEGTR---------MRAPDYTTPEMYQTMLDC------------------WHGEPSQR 332
Query: 272 PTAAEALQH 280
PT +E ++H
Sbjct: 333 PTFSELVEH 341
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 7/206 (3%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWE---ECVNLREVKSLRKMSHPNIVKLK 66
+G G+FG V + K + E+ A+K +KK + EC + + P + +L
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 408
Query: 67 EVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDL 126
+ D LYFV EY+ + F E + ++ GL ++ +G +RDL
Sbjct: 409 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDL 468
Query: 127 KPENLLV-SKDTIKIADFGLARE-INSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWA 184
K +N+++ S+ IKIADFG+ +E I + T Y APE++ Y VD WA
Sbjct: 469 KLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQ-PYGKSVDWWA 527
Query: 185 MGAIMAELITLRPLFPGTSEADEIYK 210
G ++ E++ + F G E DE+++
Sbjct: 528 FGVLLYEMLAGQAPFEGEDE-DELFQ 552
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 133/309 (43%), Gaps = 61/309 (19%)
Query: 2 ERYKLIKEVGDGTFGSVWRA----ISKQSG-EVVAIKKMKKKYYSWEECVNLREVKSLRK 56
+R KL K +G G FG V A I K + VA+K +K+ E + E+K L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 57 MSHP-NIVKL-KEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRN--------- 104
+ H N+V L + L + E+ + NL ++ + F +V
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 105 ------WCFQVFQGLAYMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTE 157
+ FQV +G+ ++ R HRDL N+L+S K+ +KI DFGLAR+I P +
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 206
Query: 158 YVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPL-FPGTSEADEIYKICS 213
R + APE + +Y+ + D+W+ G ++ E+ +L +PG +E C
Sbjct: 207 KGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCR 262
Query: 214 VIGTPTQDSWADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSW--DPSKR 271
+ T+ RA +Y P++ L W +PS+R
Sbjct: 263 RLKEGTR---------MRAPDYTTPEMYQTMLDC------------------WHGEPSQR 295
Query: 272 PTAAEALQH 280
PT +E ++H
Sbjct: 296 PTFSELVEH 304
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 33/220 (15%)
Query: 7 IKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY-SWEECVNLREVKSLRKMS-HPNIVK 64
++++G G FGSV++ + + G + AIK+ KK S +E LREV + + H ++V+
Sbjct: 14 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 73
Query: 65 LKEVIRENDILYFVFEYMECN---LYQLMKDREKC---FSEAEVRNWCFQVFQGLAYMHQ 118
E+D + EY CN L + + + F EAE+++ QV +GL Y+H
Sbjct: 74 YFSAWAEDDHMLIQNEY--CNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 131
Query: 119 RGYFHRDLKPENLLVSKDTI--------------------KIADFGLAREINSRPPFTEY 158
H D+KP N+ +S+ +I KI D G I+S P E
Sbjct: 132 MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS--PQVEE 189
Query: 159 VSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPL 198
+R+ A EVL ++Y + K D++A+ + PL
Sbjct: 190 GDSRFL-ANEVLQENYTHLPKADIFALALTVVCAAGAEPL 228
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 117/239 (48%), Gaps = 31/239 (12%)
Query: 2 ERYKLIKEVGDGTFGSVWRAIS------KQSGEVVAIKKMKKKYYSWEECVNLREVKSLR 55
++ L K +G+G FG V A + K V KM K + ++ +L +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 56 KM--SHPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDR---------------EKCF 97
KM H NI+ L ++ LY + Y + NL + ++ R E+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 98 SEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFT 156
+ ++ + +Q+ +G+ Y+ + HRDL N+LV+++ + KIADFGLAR+IN+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 157 EYVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKI 211
+ + R + APE L +Y+ + D+W+ G +M E+ TL +PG +E++K+
Sbjct: 215 KTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKL 271
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 33/220 (15%)
Query: 7 IKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY-SWEECVNLREVKSLRKMS-HPNIVK 64
++++G G FGSV++ + + G + AIK+ KK S +E LREV + + H ++V+
Sbjct: 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 75
Query: 65 LKEVIRENDILYFVFEYMECN---LYQLMKDREKC---FSEAEVRNWCFQVFQGLAYMHQ 118
E+D + EY CN L + + + F EAE+++ QV +GL Y+H
Sbjct: 76 YFSAWAEDDHMLIQNEY--CNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 133
Query: 119 RGYFHRDLKPENLLVSKDTI--------------------KIADFGLAREINSRPPFTEY 158
H D+KP N+ +S+ +I KI D G I+S P E
Sbjct: 134 MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS--PQVEE 191
Query: 159 VSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPL 198
+R+ A EVL ++Y + K D++A+ + PL
Sbjct: 192 GDSRFL-ANEVLQENYTHLPKADIFALALTVVCAAGAEPL 230
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 33/220 (15%)
Query: 7 IKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYY-SWEECVNLREVKSLRKMS-HPNIVK 64
++++G G FGSV++ + + G + AIK+ KK S +E LREV + + H ++V+
Sbjct: 14 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 73
Query: 65 LKEVIRENDILYFVFEYMECN---LYQLMKDREKC---FSEAEVRNWCFQVFQGLAYMHQ 118
E+D + EY CN L + + + F EAE+++ QV +GL Y+H
Sbjct: 74 YFSAWAEDDHMLIQNEY--CNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 131
Query: 119 RGYFHRDLKPENLLVSKDTI--------------------KIADFGLAREINSRPPFTEY 158
H D+KP N+ +S+ +I KI D G I+S P E
Sbjct: 132 MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS--PQVEE 189
Query: 159 VSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPL 198
+R+ A EVL ++Y + K D++A+ + PL
Sbjct: 190 GDSRFL-ANEVLQENYTHLPKADIFALALTVVCAAGAEPL 228
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 131/295 (44%), Gaps = 42/295 (14%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVK-SLRKMSHP 60
E K + E+G G +GSV + + K SG+++A+K+++ E+ L ++ +R P
Sbjct: 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCP 81
Query: 61 NIVKL-KEVIREND------ILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
IV+ + RE D ++ F+ +Y ++ D E + + L
Sbjct: 82 YIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDD---VIPEEILGKITLATVKAL 138
Query: 114 AYMHQR-GYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
++ + HRD+KP N+L+ + IK+ DFG++ ++ T R Y APE +
Sbjct: 139 NHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERID 198
Query: 172 QSYL---YSSKVDMWAMGAIMAELITLRPLFPG-TSEADEIYKICSVIGTPTQDSWADGL 227
S Y + D+W++G + EL T R +P S D++ ++ V G P Q S ++
Sbjct: 199 PSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQV--VKGDPPQLSNSE-- 254
Query: 228 LLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
R + F V + L+ D SKRP E L+HPF
Sbjct: 255 --EREFSPSFINFVNLCLTK-------------------DESKRPKYKELLKHPF 288
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 132/307 (42%), Gaps = 59/307 (19%)
Query: 2 ERYKLIKEVGDGTFGSVWRA----ISKQ-SGEVVAIKKMKKKYYSWEECVNLREVKSLRK 56
+R KL K +G G FG V A I K + VA+K +K+ E + E+K L
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 57 MSHP-NIVKL-KEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRN--------- 104
+ H N+V L + L + E+ + NL ++ + F + +
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLE 148
Query: 105 ----WCFQVFQGLAYMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTEYV 159
+ FQV +G+ ++ R HRDL N+L+S K+ +KI DFGLAR+I P
Sbjct: 149 HLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 160 STRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPL-FPGTSEADEIYKICSVI 215
R + APE + +Y+ + D+W+ G ++ E+ +L +PG +E C +
Sbjct: 209 DARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRRL 264
Query: 216 GTPTQDSWADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSW--DPSKRPT 273
T+ RA +Y P++ L W +PS+RPT
Sbjct: 265 KEGTR---------MRAPDYTTPEMYQTMLDC------------------WHGEPSQRPT 297
Query: 274 AAEALQH 280
+E ++H
Sbjct: 298 FSELVEH 304
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 133/309 (43%), Gaps = 61/309 (19%)
Query: 2 ERYKLIKEVGDGTFGSVWRA----ISKQSG-EVVAIKKMKKKYYSWEECVNLREVKSLRK 56
+R KL K +G G FG V A I K + VA+K +K+ E + E+K L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 57 MSHP-NIVKL-KEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRN--------- 104
+ H N+V L + L + E+ + NL ++ + F +V
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 105 ------WCFQVFQGLAYMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTE 157
+ FQV +G+ ++ R HRDL N+L+S K+ +KI DFGLAR+I P +
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 158 YVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPL-FPGTSEADEIYKICS 213
R + APE + +Y+ + D+W+ G ++ E+ +L +PG +E C
Sbjct: 198 KGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCR 253
Query: 214 VIGTPTQDSWADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSW--DPSKR 271
+ T+ RA +Y P++ L W +PS+R
Sbjct: 254 RLKEGTR---------MRAPDYTTPEMYQTMLDC------------------WHGEPSQR 286
Query: 272 PTAAEALQH 280
PT +E ++H
Sbjct: 287 PTFSELVEH 295
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 132/305 (43%), Gaps = 57/305 (18%)
Query: 2 ERYKLIKEVGDGTFGSVWRA----ISKQ-SGEVVAIKKMKKKYYSWEECVNLREVKSLRK 56
+R L K +G G FG V A I K + VA+K +K+ E + E+K L
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 57 MSHP-NIVKL-KEVIRENDILYFVFEYMEC-----------NLYQLMKDREKCFSEAE-V 102
+ H N+V L + L + E+ + N + KD K F E +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 103 RNWCFQVFQGLAYMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTEYVST 161
+ FQV +G+ ++ R HRDL N+L+S K+ +KI DFGLAR+I P +
Sbjct: 147 ICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 162 RW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPL-FPGTSEADEIYKICSVIGT 217
R + APE + +Y+ + D+W+ G ++ E+ +L +PG +E C +
Sbjct: 207 RLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRRLKE 262
Query: 218 PTQDSWADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSW--DPSKRPTAA 275
T+ RA +Y P++ L W +PS+RPT +
Sbjct: 263 GTR---------MRAPDYTTPEMYQTMLDC------------------WHGEPSQRPTFS 295
Query: 276 EALQH 280
E ++H
Sbjct: 296 ELVEH 300
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 133/309 (43%), Gaps = 61/309 (19%)
Query: 2 ERYKLIKEVGDGTFGSVWRA----ISKQSG-EVVAIKKMKKKYYSWEECVNLREVKSLRK 56
+R KL K +G G FG V A I K + VA+K +K+ E + E+K L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 57 MSHP-NIVKL-KEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRN--------- 104
+ H N+V L + L + E+ + NL ++ + F +V
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 105 ------WCFQVFQGLAYMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTE 157
+ FQV +G+ ++ R HRDL N+L+S K+ +KI DFGLAR+I P +
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 158 YVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPL-FPGTSEADEIYKICS 213
R + APE + +Y+ + D+W+ G ++ E+ +L +PG +E C
Sbjct: 198 KGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCR 253
Query: 214 VIGTPTQDSWADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSW--DPSKR 271
+ T+ RA +Y P++ L W +PS+R
Sbjct: 254 RLKEGTR---------MRAPDYTTPEMYQTMLDC------------------WHGEPSQR 286
Query: 272 PTAAEALQH 280
PT +E ++H
Sbjct: 287 PTFSELVEH 295
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 5 KLIKEVGDGTFGSVWRAISKQSGEVV----AIKKMKKKYYSWEECVNLREVKSLRKMSHP 60
K +K +G G FG+V++ I GE V AIK + + + E + M HP
Sbjct: 41 KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHP 100
Query: 61 NIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
++V+L V I L + + + + + NWC Q+ +G+ Y+ +R
Sbjct: 101 HLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR 160
Query: 121 YFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLLQS 173
HRDL N+LV S + +KI DFGLAR + EY + +W + +
Sbjct: 161 LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE--KEYNADGGKMPIKWMALECIHYRK 218
Query: 174 YLYSSKVDMWAMGAIMAELIT 194
+ + S D+W+ G + EL+T
Sbjct: 219 FTHQS--DVWSYGVTIWELMT 237
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 14/212 (6%)
Query: 9 EVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLRE-VKSLRKMSHPNIVKL-- 65
E+G G+F +V++ + ++ VA +++ + + E +E + L+ + HPNIV+
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 66 --KEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG--Y 121
+ ++ + V E + R K +R+WC Q+ +GL ++H R
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPI 152
Query: 122 FHRDLKPENLLVSKDT--IKIADFGLAREINSRPPFTEYV-STRWYRAPEVLLQSYLYSS 178
HRDLK +N+ ++ T +KI D GLA R F + V T + APE + Y S
Sbjct: 153 IHRDLKCDNIFITGPTGSVKIGDLGLA--TLKRASFAKAVIGTPEFXAPEXYEEKYDES- 209
Query: 179 KVDMWAMGAIMAELITLRPLFPGTSEADEIYK 210
VD++A G E T + A +IY+
Sbjct: 210 -VDVYAFGXCXLEXATSEYPYSECQNAAQIYR 240
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 14/221 (6%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLR---EVKSLRKMS 58
+RY+L + +G G V A + VA+K ++ + + LR E ++ ++
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADL-ARDPSFYLRFRREAQNAAALN 70
Query: 59 HPNIVKLKEV----IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
HP IV + + + Y V EY++ + + E + Q L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 115 YMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREI----NSRPPFTEYVSTRWYRAPEV 169
+ HQ G HRD+KP N+L+S + +K+ DFG+AR I NS + T Y +PE
Sbjct: 131 FSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQ 190
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYK 210
+ ++ D++++G ++ E++T P F G S Y+
Sbjct: 191 ARGDSV-DARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 5 KLIKEVGDGTFGSVWRAISKQSGEVV----AIKKMKKKYYSWEECVNLREVKSLRKMSHP 60
K +K +G G FG+V++ I GE V AIK + + + E + M HP
Sbjct: 18 KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHP 77
Query: 61 NIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
++V+L V I L + + + + + NWC Q+ +G+ Y+ +R
Sbjct: 78 HLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR 137
Query: 121 YFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLLQS 173
HRDL N+LV S + +KI DFGLAR + EY + +W + +
Sbjct: 138 LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE--KEYNADGGKMPIKWMALECIHYRK 195
Query: 174 YLYSSKVDMWAMGAIMAELIT 194
+ + S D+W+ G + EL+T
Sbjct: 196 FTHQS--DVWSYGVTIWELMT 214
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 22/214 (10%)
Query: 2 ERYKLIKEVGDGTFGSVW----RAISKQSGEV-VAIKKMKKKYYSWEECVNLREVKSLRK 56
E+ L++E+G G+FG V+ R I K E VA+K + + E L E ++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYM-----ECNLYQLMKDREKCFSEA-----EVRNWC 106
+ ++V+L V+ + V E M + L L + E E+
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 107 FQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----RPPFTEYVST 161
++ G+AY++ + + HRDL N +V+ D T+KI DFG+ R+I R +
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 162 RWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITL 195
RW APE L+ ++++ DMW+ G ++ E+ +L
Sbjct: 197 RWM-APES-LKDGVFTTSSDMWSFGVVLWEITSL 228
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 126/276 (45%), Gaps = 27/276 (9%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRK----- 56
+ +++++ +G G+FG V + ++ A+K M K ++CV EV+++ K
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNK-----QKCVERNEVRNVFKELQIM 69
Query: 57 --MSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
+ HP +V L ++ + ++ V + + + + F E V+ + ++ L
Sbjct: 70 QGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALD 129
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVL--L 171
Y+ + HRD+KP+N+L+ + + I DF +A + T T+ Y APE+
Sbjct: 130 YLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSR 189
Query: 172 QSYLYSSKVDMWAMGAIMAELITLRPLF---PGTSEADEIYKI-CSVIGTPTQDSWADGL 227
+ YS VD W++G EL+ R + TS + ++ +V+ P+ +W+ +
Sbjct: 190 KGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPS--AWSQEM 247
Query: 228 ------LLARAINYKFPQLVGVPLSVLMPSANKDAV 257
LL + +F QL V M N DAV
Sbjct: 248 VSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINWDAV 283
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 132/309 (42%), Gaps = 61/309 (19%)
Query: 2 ERYKLIKEVGDGTFGSVWRA----ISKQSG-EVVAIKKMKKKYYSWEECVNLREVKSLRK 56
+R KL K +G G FG V A I K + VA+K +K+ E + E+K L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 57 MSHP-NIVKL-KEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRN--------- 104
+ H N+V L + L + E+ + NL ++ + F +V
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 105 ------WCFQVFQGLAYMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTE 157
+ FQV +G+ ++ R HRDL N+L+S K+ +KI DFGLAR+I P
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 158 YVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPL-FPGTSEADEIYKICS 213
R + APE + +Y+ + D+W+ G ++ E+ +L +PG +E C
Sbjct: 207 KGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCR 262
Query: 214 VIGTPTQDSWADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSW--DPSKR 271
+ T+ RA +Y P++ L W +PS+R
Sbjct: 263 RLKEGTR---------MRAPDYTTPEMYQTMLDC------------------WHGEPSQR 295
Query: 272 PTAAEALQH 280
PT +E ++H
Sbjct: 296 PTFSELVEH 304
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 125/289 (43%), Gaps = 50/289 (17%)
Query: 10 VGDGTFGS-VWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS-HPNIVKLKE 67
+G G G+ V+R + VA+K++ + +S+ + REV+ LR+ HPN+++
Sbjct: 32 LGHGAEGTIVYRGMFDNRD--VAVKRILPECFSFAD----REVQLLRESDEHPNVIRYFC 85
Query: 68 VIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLK 127
++ Y E L + ++ ++ E Q GLA++H HRDLK
Sbjct: 86 TEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLK 145
Query: 128 PENLLVS------KDTIKIADFGLAREIN-SRPPFTEYV---STRWYRAPEVLLQSYLYS 177
P N+L+S K I+DFGL +++ R F+ T + APE+L + +
Sbjct: 146 PHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKEN 205
Query: 178 S--KVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINY 235
VD+++ G + +I ++ S G L R N
Sbjct: 206 PTYTVDIFSAGCVFYYVI-------------------------SEGSHPFGKSLQRQANI 240
Query: 236 KFPQLVGVPLSVLMPSANKDAVS--LIASLCSWDPSKRPTAAEALQHPF 282
L L L P ++D ++ LI + + DP KRP+A L+HPF
Sbjct: 241 ---LLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPF 286
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 132/309 (42%), Gaps = 61/309 (19%)
Query: 2 ERYKLIKEVGDGTFGSVWRA----ISKQSG-EVVAIKKMKKKYYSWEECVNLREVKSLRK 56
+R KL K +G G FG V A I K + VA+K +K+ E + E+K L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 57 MSHP-NIVKL-KEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRN--------- 104
+ H N+V L + L + E+ + NL ++ + F +V
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 105 ------WCFQVFQGLAYMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTE 157
+ FQV +G+ ++ R HRDL N+L+S K+ +KI DFGLAR+I P
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 158 YVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPL-FPGTSEADEIYKICS 213
R + APE + +Y+ + D+W+ G ++ E+ +L +PG +E C
Sbjct: 198 KGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCR 253
Query: 214 VIGTPTQDSWADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSW--DPSKR 271
+ T+ RA +Y P++ L W +PS+R
Sbjct: 254 RLKEGTR---------MRAPDYTTPEMYQTMLDC------------------WHGEPSQR 286
Query: 272 PTAAEALQH 280
PT +E ++H
Sbjct: 287 PTFSELVEH 295
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 23/207 (11%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK--------KYYSWEECVNLREVKS 53
E Y+++K +G G FG V K + +V A+K + K + WEE R++ +
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE----RDIMA 129
Query: 54 LRKMSHPNIVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQG 112
+ P +V+L +++ LY V EYM +L LM + + E R + +V
Sbjct: 130 F--ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTAEVVLA 185
Query: 113 LAYMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPF--TEYVSTRWYRAPEV 169
L +H G+ HRD+KP+N+L+ K +K+ADFG ++N V T Y +PEV
Sbjct: 186 LDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 245
Query: 170 LLQ---SYLYSSKVDMWAMGAIMAELI 193
L Y + D W++G + E++
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEML 272
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 22/214 (10%)
Query: 2 ERYKLIKEVGDGTFGSVW----RAISKQSGEV-VAIKKMKKKYYSWEECVNLREVKSLRK 56
E+ L++E+G G+FG V+ R I K E VA+K + + E L E ++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYM-----ECNLYQLMKDREKCFSEA-----EVRNWC 106
+ ++V+L V+ + V E M + L L + E E+
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 107 FQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----RPPFTEYVST 161
++ G+AY++ + + HRDL N +V+ D T+KI DFG+ R+I R +
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 162 RWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITL 195
RW APE L+ ++++ DMW+ G ++ E+ +L
Sbjct: 197 RWM-APES-LKDGVFTTSSDMWSFGVVLWEITSL 228
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 23/207 (11%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK--------KYYSWEECVNLREVKS 53
E Y+++K +G G FG V K + +V A+K + K + WEE R++ +
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE----RDIMA 129
Query: 54 LRKMSHPNIVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQG 112
+ P +V+L +++ LY V EYM +L LM + + E R + +V
Sbjct: 130 F--ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTAEVVLA 185
Query: 113 LAYMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPF--TEYVSTRWYRAPEV 169
L +H G+ HRD+KP+N+L+ K +K+ADFG ++N V T Y +PEV
Sbjct: 186 LDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 245
Query: 170 LLQ---SYLYSSKVDMWAMGAIMAELI 193
L Y + D W++G + E++
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEML 272
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 22/214 (10%)
Query: 2 ERYKLIKEVGDGTFGSVW----RAISKQSGEV-VAIKKMKKKYYSWEECVNLREVKSLRK 56
E+ L++E+G G+FG V+ R I K E VA+K + + E L E ++
Sbjct: 14 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 73
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYM-----ECNLYQLMKDREKCFSEA-----EVRNWC 106
+ ++V+L V+ + V E M + L L + E E+
Sbjct: 74 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 133
Query: 107 FQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----RPPFTEYVST 161
++ G+AY++ + + HRDL N +V+ D T+KI DFG+ R+I R +
Sbjct: 134 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 193
Query: 162 RWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITL 195
RW APE L+ ++++ DMW+ G ++ E+ +L
Sbjct: 194 RWM-APES-LKDGVFTTSSDMWSFGVVLWEITSL 225
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 134/309 (43%), Gaps = 61/309 (19%)
Query: 2 ERYKLIKEVGDGTFGSVWRA----ISKQSG-EVVAIKKMKKKYYSWEECVNLREVKSLRK 56
+R KL K +G G FG V A I K + VA+K +K+ E + E+K L
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 57 MSHP-NIVKL-KEVIRENDILYFVFEYME-CNLYQLMKDREKCF---SEA---------- 100
+ H N+V L + L + E+ + NL ++ + F EA
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLT 148
Query: 101 --EVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTE 157
+ + FQV +G+ ++ R HRDL N+L+S K+ +KI DFGLAR+I P +
Sbjct: 149 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 208
Query: 158 YVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPL-FPGTSEADEIYKICS 213
R + APE + +Y+ + D+W+ G ++ E+ +L +PG +E C
Sbjct: 209 KGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCR 264
Query: 214 VIGTPTQDSWADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSW--DPSKR 271
+ T+ RA +Y P++ L W +PS+R
Sbjct: 265 RLKEGTR---------MRAPDYTTPEMYQTMLDC------------------WHGEPSQR 297
Query: 272 PTAAEALQH 280
PT +E ++H
Sbjct: 298 PTFSELVEH 306
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 23/207 (11%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK--------KYYSWEECVNLREVKS 53
E Y+++K +G G FG V K + +V A+K + K + WEE R++ +
Sbjct: 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE----RDIMA 124
Query: 54 LRKMSHPNIVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQG 112
+ P +V+L +++ LY V EYM +L LM + + E R + +V
Sbjct: 125 F--ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTAEVVLA 180
Query: 113 LAYMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPF--TEYVSTRWYRAPEV 169
L +H G+ HRD+KP+N+L+ K +K+ADFG ++N V T Y +PEV
Sbjct: 181 LDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 240
Query: 170 LLQ---SYLYSSKVDMWAMGAIMAELI 193
L Y + D W++G + E++
Sbjct: 241 LKSQGGDGYYGRECDWWSVGVFLYEML 267
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 132/309 (42%), Gaps = 61/309 (19%)
Query: 2 ERYKLIKEVGDGTFGSVWRA----ISKQSG-EVVAIKKMKKKYYSWEECVNLREVKSLRK 56
+R KL K +G G FG V A I K + VA+K +K+ E + E+K L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 57 MSHP-NIVKL-KEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRN--------- 104
+ H N+V L + L + E+ + NL ++ + F +V
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 105 ------WCFQVFQGLAYMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTE 157
+ FQV +G+ ++ R HRDL N+L+S K+ +KI DFGLAR+I P
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 158 YVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPL-FPGTSEADEIYKICS 213
R + APE + +Y+ + D+W+ G ++ E+ +L +PG +E C
Sbjct: 198 KGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCR 253
Query: 214 VIGTPTQDSWADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSW--DPSKR 271
+ T+ RA +Y P++ L W +PS+R
Sbjct: 254 RLKEGTR---------MRAPDYTTPEMYQTMLDC------------------WHGEPSQR 286
Query: 272 PTAAEALQH 280
PT +E ++H
Sbjct: 287 PTFSELVEH 295
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 6 LIKEVGDGTFGSVWRA-----ISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHP 60
L +E+G+G FG V+ A +Q +VA+K +K + + + RE + L + H
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFH-REAELLTNLQHE 75
Query: 61 NIVKLKEVIRENDILYFVFEYME-CNLYQLMK------------DREKCFSEAEVRNWCF 107
+IVK V E D L VFEYM+ +L + ++ + +++++ +
Sbjct: 76 HIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 108 QVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----RPPFTEYVSTR 162
Q+ G+ Y+ + + HRDL N LV ++ +KI DFG++R++ S R + R
Sbjct: 136 QIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 195
Query: 163 WYRAPEVLLQSYLYSSKVDMWAMGAIMAELIT 194
W ++ + ++++ D+W++G ++ E+ T
Sbjct: 196 WMPPESIMYRK--FTTESDVWSLGVVLWEIFT 225
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 97/204 (47%), Gaps = 11/204 (5%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSHPNIVKLKE 67
+G G FG V+ K +G++ A KK+ KK + + E K L K+ IV L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 68 VIRENDILYFVFEYMEC-----NLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYF 122
L V M ++Y + +D F E + Q+ GL ++HQR
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG-FQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 123 HRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTE-YVSTRWYRAPEVLLQSYLYSSKV 180
+RDLKPEN+L+ D ++I+D GLA E+ + T+ Y T + APE+LL Y V
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE-YDFSV 370
Query: 181 DMWAMGAIMAELITLRPLFPGTSE 204
D +A+G + E+I R F E
Sbjct: 371 DYFALGVTLYEMIAARGPFRARGE 394
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 97/204 (47%), Gaps = 11/204 (5%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSHPNIVKLKE 67
+G G FG V+ K +G++ A KK+ KK + + E K L K+ IV L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 68 VIRENDILYFVFEYMEC-----NLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYF 122
L V M ++Y + +D F E + Q+ GL ++HQR
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG-FQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 123 HRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTE-YVSTRWYRAPEVLLQSYLYSSKV 180
+RDLKPEN+L+ D ++I+D GLA E+ + T+ Y T + APE+LL Y V
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE-YDFSV 370
Query: 181 DMWAMGAIMAELITLRPLFPGTSE 204
D +A+G + E+I R F E
Sbjct: 371 DYFALGVTLYEMIAARGPFRARGE 394
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 97/204 (47%), Gaps = 11/204 (5%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSHPNIVKLKE 67
+G G FG V+ K +G++ A KK+ KK + + E K L K+ IV L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 68 VIRENDILYFVFEYMEC-----NLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYF 122
L V M ++Y + +D F E + Q+ GL ++HQR
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG-FQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 123 HRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTE-YVSTRWYRAPEVLLQSYLYSSKV 180
+RDLKPEN+L+ D ++I+D GLA E+ + T+ Y T + APE+LL Y V
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE-YDFSV 370
Query: 181 DMWAMGAIMAELITLRPLFPGTSE 204
D +A+G + E+I R F E
Sbjct: 371 DYFALGVTLYEMIAARGPFRARGE 394
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 12/214 (5%)
Query: 8 KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLR-EVKSLRKMSHPNIVKLK 66
+ +G G+FG+V++ K G+V A+K + + ++ + EV LRK H NI+ L
Sbjct: 30 QRIGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 85
Query: 67 EVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRD 125
L V ++ E +LY + E F ++ + Q +G+ Y+H + HRD
Sbjct: 86 MGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRD 145
Query: 126 LKPENLLVSKD-TIKIADFGLAREI---NSRPPFTEYVSTRWYRAPEV--LLQSYLYSSK 179
LK N+ + +D T+KI DFGLA E + F + + + APEV + S YS +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 180 VDMWAMGAIMAELITLRPLFPGTSEADEIYKICS 213
D++A G ++ EL+T + + + D+I ++
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG 239
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 14/221 (6%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLR---EVKSLRKMS 58
+RY+L + +G G V A + VA+K ++ + + LR E ++ ++
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADL-ARDPSFYLRFRREAQNAAALN 70
Query: 59 HPNIVKLKEV----IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
HP IV + + + Y V EY++ + + E + Q L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 115 YMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREI----NSRPPFTEYVSTRWYRAPEV 169
+ HQ G HRD+KP N+++S + +K+ DFG+AR I NS + T Y +PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYK 210
+ ++ D++++G ++ E++T P F G S Y+
Sbjct: 191 ARGDSV-DARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 132/309 (42%), Gaps = 61/309 (19%)
Query: 2 ERYKLIKEVGDGTFGSVWRA----ISKQSG-EVVAIKKMKKKYYSWEECVNLREVKSLRK 56
+R KL K +G G FG V A I K + VA+K +K+ E + E+K L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 57 MSHP-NIVKL-KEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRN--------- 104
+ H N+V L + L + E+ + NL ++ + F +V
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 105 ------WCFQVFQGLAYMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTE 157
+ FQV +G+ ++ R HRDL N+L+S K+ +KI DFGLAR+I P
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVR 206
Query: 158 YVSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPL-FPGTSEADEIYKICS 213
R + APE + +Y+ + D+W+ G ++ E+ +L +PG +E C
Sbjct: 207 KGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCR 262
Query: 214 VIGTPTQDSWADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSW--DPSKR 271
+ T+ RA +Y P++ L W +PS+R
Sbjct: 263 RLKEGTR---------MRAPDYTTPEMYQTMLDC------------------WHGEPSQR 295
Query: 272 PTAAEALQH 280
PT +E ++H
Sbjct: 296 PTFSELVEH 304
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 111/224 (49%), Gaps = 36/224 (16%)
Query: 6 LIKEVGDGTFGSVWRAIS-----KQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHP 60
L K +G+G FG V +A + + VA+K +K+ E L E L++++HP
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 61 NIVKLKEVIRENDILYFVFEYME-CNLYQLMKDR-----------------------EKC 96
+++KL ++ L + EY + +L +++ E+
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 97 FSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPF 155
+ ++ ++ +Q+ QG+ Y+ + HRDL N+LV++ +KI+DFGL+R++ +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206
Query: 156 TE----YVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITL 195
+ + +W A E L ++Y+++ D+W+ G ++ E++TL
Sbjct: 207 VKRSQGRIPVKWM-AIESLF-DHIYTTQSDVWSFGVLLWEIVTL 248
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 97/204 (47%), Gaps = 11/204 (5%)
Query: 10 VGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN--LREVKSLRKMSHPNIVKLKE 67
+G G FG V+ K +G++ A KK+ KK + + E K L K+ IV L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 68 VIRENDILYFVFEYMEC-----NLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYF 122
L V M ++Y + +D F E + Q+ GL ++HQR
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG-FQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 123 HRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTE-YVSTRWYRAPEVLLQSYLYSSKV 180
+RDLKPEN+L+ D ++I+D GLA E+ + T+ Y T + APE+LL Y V
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE-YDFSV 370
Query: 181 DMWAMGAIMAELITLRPLFPGTSE 204
D +A+G + E+I R F E
Sbjct: 371 DYFALGVTLYEMIAARGPFRARGE 394
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 132/304 (43%), Gaps = 55/304 (18%)
Query: 2 ERYKLIKEVGDGTFGSVWRA----ISKQ-SGEVVAIKKMKKKYYSWEECVNLREVKSLRK 56
+R L K +G G FG V A I K + VA+K +K+ E + E+K L
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 57 MSHP-NIVKL-KEVIRENDILYFVFEYMEC-----------NLYQLMKDREKCFSEAE-V 102
+ H N+V L + L + E+ + N + KD K F E +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 103 RNWCFQVFQGLAYMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTEYVST 161
+ FQV +G+ ++ R HRDL N+L+S K+ +KI DFGLAR+I P +
Sbjct: 147 IXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 162 RW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPL-FPGTSEADEIYKICSVIGT 217
R + APE + +Y+ + D+W+ G ++ E+ +L +PG +E +
Sbjct: 207 RLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXR------- 258
Query: 218 PTQDSWADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLC-SWDPSKRPTAAE 276
+G + RA +Y P++ L C +PS+RPT +E
Sbjct: 259 ----RLKEGTRM-RAPDYTTPEMYQTMLD-----------------CWHGEPSQRPTFSE 296
Query: 277 ALQH 280
++H
Sbjct: 297 LVEH 300
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 22/214 (10%)
Query: 2 ERYKLIKEVGDGTFGSVW----RAISKQSGEV-VAIKKMKKKYYSWEECVNLREVKSLRK 56
E+ L++E+G G+FG V+ R I K E VA+K + + E L E ++
Sbjct: 16 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 75
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYM-----ECNLYQLMKDREKCFSEA-----EVRNWC 106
+ ++V+L V+ + V E M + L L + E E+
Sbjct: 76 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 135
Query: 107 FQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----RPPFTEYVST 161
++ G+AY++ + + HRDL N +V+ D T+KI DFG+ R+I R +
Sbjct: 136 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 195
Query: 162 RWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITL 195
RW APE L+ ++++ DMW+ G ++ E+ +L
Sbjct: 196 RWM-APES-LKDGVFTTSSDMWSFGVVLWEITSL 227
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 22/214 (10%)
Query: 2 ERYKLIKEVGDGTFGSVW----RAISKQSGEV-VAIKKMKKKYYSWEECVNLREVKSLRK 56
E+ L++E+G G+FG V+ R I K E VA+K + + E L E ++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYM-----ECNLYQLMKDREKCFSEA-----EVRNWC 106
+ ++V+L V+ + V E M + L L + E E+
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 107 FQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----RPPFTEYVST 161
++ G+AY++ + + HRDL N +V+ D T+KI DFG+ R+I R +
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPV 196
Query: 162 RWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITL 195
RW APE L+ ++++ DMW+ G ++ E+ +L
Sbjct: 197 RWM-APES-LKDGVFTTSSDMWSFGVVLWEITSL 228
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 12/214 (5%)
Query: 8 KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLR-EVKSLRKMSHPNIVKLK 66
+ +G G+FG+V++ K G+V A+K + + ++ + EV LRK H NI+ L
Sbjct: 30 QRIGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 85
Query: 67 EVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRD 125
L V ++ E +LY + E F ++ + Q +G+ Y+H + HRD
Sbjct: 86 MGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRD 145
Query: 126 LKPENLLVSKD-TIKIADFGLAREI---NSRPPFTEYVSTRWYRAPEV--LLQSYLYSSK 179
LK N+ + +D T+KI DFGLA E + F + + + APEV + S YS +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 180 VDMWAMGAIMAELITLRPLFPGTSEADEIYKICS 213
D++A G ++ EL+T + + + D+I ++
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG 239
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E ME +L+ + +R E R++ +QV + +
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITER-GALQEELARSFFWQVLEAV 127
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 186
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMV 208
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 12/209 (5%)
Query: 8 KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLR-EVKSLRKMSHPNIVKLK 66
+ +G G+FG+V++ K G+V A+K + + ++ + EV LRK H NI+ L
Sbjct: 14 QRIGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 69
Query: 67 EVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRD 125
L V ++ E +LY + E F ++ + Q QG+ Y+H + HRD
Sbjct: 70 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 129
Query: 126 LKPENLLVSKD-TIKIADFGLAREI---NSRPPFTEYVSTRWYRAPEV--LLQSYLYSSK 179
LK N+ + +D T+KI DFGLA E + F + + + APEV + YS +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 180 VDMWAMGAIMAELITLRPLFPGTSEADEI 208
D++A G ++ EL+T + + + D+I
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 22/214 (10%)
Query: 2 ERYKLIKEVGDGTFGSVW----RAISKQSGEV-VAIKKMKKKYYSWEECVNLREVKSLRK 56
E+ L++E+G G+FG V+ R I K E VA+K + + E L E ++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYM-----ECNLYQLMKDREKCFSEA-----EVRNWC 106
+ ++V+L V+ + V E M + L L + E E+
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 107 FQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----RPPFTEYVST 161
++ G+AY++ + + HRDL N +V+ D T+KI DFG+ R+I R +
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 196
Query: 162 RWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITL 195
RW APE L+ ++++ DMW+ G ++ E+ +L
Sbjct: 197 RWM-APES-LKDGVFTTSSDMWSFGVVLWEITSL 228
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 19/201 (9%)
Query: 7 IKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNI 62
+K +G G FG+V++ I GE VAIK +++ L E + + P +
Sbjct: 22 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYV 81
Query: 63 VKLKEVIRENDILYFVFEYME--CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRG 120
+L + + + V + M C L + ++R + S+ ++ NWC Q+ +G++Y+
Sbjct: 82 SRLLGICLTSTV-QLVTQLMPYGCLLDHVRENRGRLGSQ-DLLNWCMQIAKGMSYLEDVR 139
Query: 121 YFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLLQS 173
HRDL N+LV S + +KI DFGLAR ++ TEY V +W +L +
Sbjct: 140 LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE--TEYHADGGKVPIKWMALESILRRR 197
Query: 174 YLYSSKVDMWAMGAIMAELIT 194
+ + S D+W+ G + EL+T
Sbjct: 198 FTHQS--DVWSYGVTVWELMT 216
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLR---EVKSLRKMS 58
+RY+L + +G G V A + VA+K ++ + + LR E ++ ++
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADL-ARDPSFYLRFRREAQNAAALN 70
Query: 59 HPNIVKLKEV----IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
HP IV + + + Y V EY++ + + E + Q L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 115 YMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREI----NSRPPFTEYVSTRWYRAPEV 169
+ HQ G HRD+KP N+++S + +K+ DFG+AR I NS + T Y +PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTS 203
+ ++ D++++G ++ E++T P F G S
Sbjct: 191 ARGDSV-DARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 109/215 (50%), Gaps = 14/215 (6%)
Query: 8 KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLR-EVKSLRKMSHPNIVKLK 66
+ +G G+FG+V++ K G+V A+K + + ++ + EV LRK H NI+ L
Sbjct: 18 QRIGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 73
Query: 67 EVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRD 125
L V ++ E +LY + E F ++ + Q +G+ Y+H + HRD
Sbjct: 74 MGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRD 133
Query: 126 LKPENLLVSKD-TIKIADFGLAREINSR----PPFTEYVSTRWYRAPEV--LLQSYLYSS 178
LK N+ + +D T+KI DFGLA + SR F + + + APEV + S YS
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 192
Query: 179 KVDMWAMGAIMAELITLRPLFPGTSEADEIYKICS 213
+ D++A G ++ EL+T + + + D+I ++
Sbjct: 193 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG 227
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 120/259 (46%), Gaps = 29/259 (11%)
Query: 8 KEVGDGTFGSVWRAISKQSGE---VVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVK 64
K VG G FG V K + VAIK +K Y + L E + + HPNI++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 65 LKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFH 123
L+ V+ ++ + V E ME +L ++ + F+ ++ + G+ Y+ G H
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVH 170
Query: 124 RDLKPENLLVSKDTI-KIADFGLAREINSRP--PFTEY---VSTRWYRAPEVLLQSYLYS 177
RDL N+L++ + + K++DFGL+R + P +T + RW +PE + ++
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT-SPEAIAYRK-FT 228
Query: 178 SKVDMWAMGAIMAELITL--RPLFPGTSE-----ADEIYKICSVIGTPTQ------DSWA 224
S D+W+ G ++ E+++ RP + +++ DE Y++ + P D W
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 225 DGLLLARAINYKFPQLVGV 243
R KF Q+V +
Sbjct: 289 KD----RNNRPKFEQIVSI 303
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK +G G FG+V++ + GE VAIK++++ L E + + +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 60 PNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
P++ +L + + + + + M L +++ + + NWC Q+ +G+ Y+
Sbjct: 81 PHVCRLLGICLTSTV-QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 119 RGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLL 171
R HRDL N+LV + +KI DFGLA+ + + EY V +W +L
Sbjct: 140 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE--KEYHAEGGKVPIKWMALESILH 197
Query: 172 QSYLYSSKVDMWAMGAIMAELITL 195
+ Y + S D+W+ G + EL+T
Sbjct: 198 RIYTHQS--DVWSYGVTVWELMTF 219
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 12/209 (5%)
Query: 8 KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLR-EVKSLRKMSHPNIVKLK 66
+ +G G+FG+V++ K G+V A+K + + ++ + EV LRK H NI+ L
Sbjct: 34 QRIGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 89
Query: 67 EVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRD 125
L V ++ E +LY + E F ++ + Q QG+ Y+H + HRD
Sbjct: 90 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 149
Query: 126 LKPENLLVSKD-TIKIADFGLAREI---NSRPPFTEYVSTRWYRAPEV--LLQSYLYSSK 179
LK N+ + +D T+KI DFGLA E + F + + + APEV + YS +
Sbjct: 150 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 209
Query: 180 VDMWAMGAIMAELITLRPLFPGTSEADEI 208
D++A G ++ EL+T + + + D+I
Sbjct: 210 SDVYAFGIVLYELMTGQLPYSNINNRDQI 238
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 8 KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKY-YSWEECVNL--REVKSLRKMSHPNIVK 64
++G+G FG V++ + VA+KK+ + EE +E+K + K H N+V+
Sbjct: 37 NKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 94
Query: 65 LKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQ------VFQGLAYMHQ 118
L + D L V+ YM + DR C +W + G+ ++H+
Sbjct: 95 LLGFSSDGDDLCLVYVYMPNGS---LLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 151
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAR---EINSRPPFTEYVSTRWYRAPEVLLQSY 174
+ HRD+K N+L+ + T KI+DFGLAR + + V T Y APE L
Sbjct: 152 NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGE- 210
Query: 175 LYSSKVDMWAMGAIMAELITLRP 197
+ K D+++ G ++ E+IT P
Sbjct: 211 -ITPKSDIYSFGVVLLEIITGLP 232
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 110/224 (49%), Gaps = 36/224 (16%)
Query: 6 LIKEVGDGTFGSVWRAIS-----KQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHP 60
L K +G+G FG V +A + + VA+K +K+ E L E L++++HP
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 61 NIVKLKEVIRENDILYFVFEYME-CNLYQLMKDR-----------------------EKC 96
+++KL ++ L + EY + +L +++ E+
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 97 FSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPF 155
+ ++ ++ +Q+ QG+ Y+ + HRDL N+LV++ +KI+DFGL+R++
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 156 TE----YVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITL 195
+ + +W A E L ++Y+++ D+W+ G ++ E++TL
Sbjct: 207 VKRSQGRIPVKWM-AIESLF-DHIYTTQSDVWSFGVLLWEIVTL 248
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK +G G FG+V++ + GE VAIK++++ L E + + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 60 PNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
P++ +L + + + + + M L +++ + + NWC Q+ +G+ Y+
Sbjct: 80 PHVCRLLGICLTSTV-QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 119 RGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLL 171
R HRDL N+LV + +KI DFGLA+ + + EY V +W +L
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE--KEYHAEGGKVPIKWMALESILH 196
Query: 172 QSYLYSSKVDMWAMGAIMAELIT 194
+ Y + S D+W+ G + EL+T
Sbjct: 197 RIYTHQS--DVWSYGVTVWELMT 217
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK +G G FG+V++ + GE VAIK++++ L E + + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 60 PNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
P++ +L + + + + + M L +++ + + NWC Q+ +G+ Y+
Sbjct: 79 PHVCRLLGICLTSTV-QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 119 RGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLL 171
R HRDL N+LV + +KI DFGLA+ + + EY V +W +L
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE--KEYHAEGGKVPIKWMALESILH 195
Query: 172 QSYLYSSKVDMWAMGAIMAELITL 195
+ Y + S D+W+ G + EL+T
Sbjct: 196 RIYTHQS--DVWSYGVTVWELMTF 217
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK +G G FG+V++ + GE VAIK++++ L E + + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 60 PNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
P++ +L + + + + + M L +++ + + NWC Q+ +G+ Y+
Sbjct: 78 PHVCRLLGICLTSTV-QLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 119 RGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLL 171
R HRDL N+LV + +KI DFGLA+ + + EY V +W +L
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE--KEYHAEGGKVPIKWMALESILH 194
Query: 172 QSYLYSSKVDMWAMGAIMAELITL 195
+ Y + S D+W+ G + EL+T
Sbjct: 195 RIYTHQS--DVWSYGVTVWELMTF 216
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK +G G FG+V++ + GE VAIK++++ L E + + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 60 PNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
P++ +L + + + + + M L +++ + + NWC Q+ +G+ Y+
Sbjct: 78 PHVCRLLGICLTSTV-QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 119 RGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLL 171
R HRDL N+LV + +KI DFGLA+ + + EY V +W +L
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE--KEYHAEGGKVPIKWMALESILH 194
Query: 172 QSYLYSSKVDMWAMGAIMAELITL 195
+ Y + S D+W+ G + EL+T
Sbjct: 195 RIYTHQS--DVWSYGVTVWELMTF 216
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 14/221 (6%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLR---EVKSLRKMS 58
+RY+L + +G G V A + VA+K ++ + + LR E ++ ++
Sbjct: 29 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADL-ARDPSFYLRFRREAQNAAALN 87
Query: 59 HPNIVKLKEV----IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
HP IV + + + Y V EY++ + + E + Q L
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 147
Query: 115 YMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREI----NSRPPFTEYVSTRWYRAPEV 169
+ HQ G HRD+KP N+++S + +K+ DFG+AR I NS + T Y +PE
Sbjct: 148 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 207
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYK 210
+ ++ D++++G ++ E++T P F G S Y+
Sbjct: 208 ARGDSV-DARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 247
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK +G G FG+V++ + GE VAIK++++ L E + + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 60 PNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
P++ +L + + + + + M L +++ + + NWC Q+ +G+ Y+
Sbjct: 77 PHVCRLLGICLTSTV-QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 119 RGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLL 171
R HRDL N+LV + +KI DFGLA+ + + EY V +W +L
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE--KEYHAEGGKVPIKWMALESILH 193
Query: 172 QSYLYSSKVDMWAMGAIMAELITL 195
+ Y + S D+W+ G + EL+T
Sbjct: 194 RIYTHQS--DVWSYGVTVWELMTF 215
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 14/210 (6%)
Query: 8 KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLR-EVKSLRKMSHPNIVKLK 66
+ +G G+FG+V++ K G+V A+K + + ++ + EV LRK H NI+ L
Sbjct: 16 QRIGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 71
Query: 67 EVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRD 125
L V ++ E +LY + E F ++ + Q QG+ Y+H + HRD
Sbjct: 72 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 131
Query: 126 LKPENLLVSKD-TIKIADFGLAREINSR----PPFTEYVSTRWYRAPEV--LLQSYLYSS 178
LK N+ + +D T+KI DFGLA + SR F + + + APEV + YS
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 190
Query: 179 KVDMWAMGAIMAELITLRPLFPGTSEADEI 208
+ D++A G ++ EL+T + + + D+I
Sbjct: 191 QSDVYAFGIVLYELMTGQLPYSNINNRDQI 220
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 26/206 (12%)
Query: 8 KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKY-YSWEECVNL--REVKSLRKMSHPNIVK 64
++G+G FG V++ + VA+KK+ + EE +E+K + K H N+V+
Sbjct: 31 NKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 88
Query: 65 LKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQ------VFQGLAYMHQ 118
L + D L V+ YM + DR C +W + G+ ++H+
Sbjct: 89 LLGFSSDGDDLCLVYVYMPNGS---LLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 145
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLL 171
+ HRD+K N+L+ + T KI+DFGLAR + F + V T Y APE L
Sbjct: 146 NHHIHRDIKSANILLDEAFTAKISDFGLAR---ASEKFAQXVMXXRIVGTTAYMAPEALR 202
Query: 172 QSYLYSSKVDMWAMGAIMAELITLRP 197
+ K D+++ G ++ E+IT P
Sbjct: 203 GE--ITPKSDIYSFGVVLLEIITGLP 226
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 14/210 (6%)
Query: 8 KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLR-EVKSLRKMSHPNIVKLK 66
+ +G G+FG+V++ K G+V A+K + + ++ + EV LRK H NI+ L
Sbjct: 14 QRIGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 69
Query: 67 EVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRD 125
L V ++ E +LY + E F ++ + Q QG+ Y+H + HRD
Sbjct: 70 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 129
Query: 126 LKPENLLVSKD-TIKIADFGLAREINSR----PPFTEYVSTRWYRAPEV--LLQSYLYSS 178
LK N+ + +D T+KI DFGLA + SR F + + + APEV + YS
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 179 KVDMWAMGAIMAELITLRPLFPGTSEADEI 208
+ D++A G ++ EL+T + + + D+I
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK +G G FG+V++ + GE VAIK++++ L E + + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
P++ +L + + + L +++ + + NWC Q+ +G+ Y+ R
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLLQ 172
HRDL N+LV + +KI DFGLA+ + + EY V +W +L +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE--KEYHAEGGKVPIKWMALESILHR 194
Query: 173 SYLYSSKVDMWAMGAIMAELITL 195
Y + S D+W+ G + EL+T
Sbjct: 195 IYTHQS--DVWSYGVTVWELMTF 215
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 14/210 (6%)
Query: 8 KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLR-EVKSLRKMSHPNIVKLK 66
+ +G G+FG+V++ K G+V A+K + + ++ + EV LRK H NI+ L
Sbjct: 19 QRIGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 74
Query: 67 EVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRD 125
L V ++ E +LY + E F ++ + Q QG+ Y+H + HRD
Sbjct: 75 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 134
Query: 126 LKPENLLVSKD-TIKIADFGLAREINSR----PPFTEYVSTRWYRAPEV--LLQSYLYSS 178
LK N+ + +D T+KI DFGLA + SR F + + + APEV + YS
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 179 KVDMWAMGAIMAELITLRPLFPGTSEADEI 208
+ D++A G ++ EL+T + + + D+I
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNINNRDQI 223
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 12/209 (5%)
Query: 8 KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLR-EVKSLRKMSHPNIVKLK 66
+ +G G+FG+V++ K G+V A+K + + ++ + EV LRK H NI+ L
Sbjct: 42 QRIGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 97
Query: 67 EVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRD 125
L V ++ E +LY + E F ++ + Q QG+ Y+H + HRD
Sbjct: 98 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 157
Query: 126 LKPENLLVSKD-TIKIADFGLAREI---NSRPPFTEYVSTRWYRAPEV--LLQSYLYSSK 179
LK N+ + +D T+KI DFGLA E + F + + + APEV + YS +
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 180 VDMWAMGAIMAELITLRPLFPGTSEADEI 208
D++A G ++ EL+T + + + D+I
Sbjct: 218 SDVYAFGIVLYELMTGQLPYSNINNRDQI 246
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 128/298 (42%), Gaps = 52/298 (17%)
Query: 2 ERYKLIKEV-GDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHP 60
+ Y+L K+V G G G V +++G+ A+K + + +E + + P
Sbjct: 28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDH-----HWQASGGP 82
Query: 61 NIVKLKEVIRE----NDILYFVFEYMECN-LYQLMKDR-EKCFSEAEVRNWCFQVFQGLA 114
+IV + +V L + E ME L+ +++R ++ F+E E + +
Sbjct: 83 HIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 142
Query: 115 YMHQRGYFHRDLKPENLLVS---KDTI-KIADFGLAREINSR----PPFTEYVSTRWYRA 166
++H HRD+KPENLL + KD + K+ DFG A+E P +T Y Y A
Sbjct: 143 FLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-----YVA 197
Query: 167 PEVLLQSYLYSSKVDMWAMGAIMAELIT-LRPLFPGTSEADEIYKICSVIGTPTQDSWAD 225
PEVL Y DMW++G IM L+ P + T +A +
Sbjct: 198 PEVLGPEK-YDKSCDMWSLGVIMYILLCGFPPFYSNTGQA-----------------ISP 239
Query: 226 GL-LLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
G+ R Y FP +S +DA LI L DP++R T + + HP+
Sbjct: 240 GMKRRIRLGQYGFPNPEWSEVS-------EDAKQLIRLLLKTDPTERLTITQFMNHPW 290
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 14/210 (6%)
Query: 8 KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLR-EVKSLRKMSHPNIVKLK 66
+ +G G+FG+V++ K G+V A+K + + ++ + EV LRK H NI+ L
Sbjct: 19 QRIGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 74
Query: 67 EVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRD 125
L V ++ E +LY + E F ++ + Q QG+ Y+H + HRD
Sbjct: 75 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 134
Query: 126 LKPENLLVSKD-TIKIADFGLAREINSR----PPFTEYVSTRWYRAPEV--LLQSYLYSS 178
LK N+ + +D T+KI DFGLA + SR F + + + APEV + YS
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 179 KVDMWAMGAIMAELITLRPLFPGTSEADEI 208
+ D++A G ++ EL+T + + + D+I
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNINNRDQI 223
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 128/298 (42%), Gaps = 52/298 (17%)
Query: 2 ERYKLIKEV-GDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHP 60
+ Y+L K+V G G G V +++G+ A+K + + +E + + P
Sbjct: 9 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDH-----HWQASGGP 63
Query: 61 NIVKLKEVIRE----NDILYFVFEYMECN-LYQLMKDR-EKCFSEAEVRNWCFQVFQGLA 114
+IV + +V L + E ME L+ +++R ++ F+E E + +
Sbjct: 64 HIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 123
Query: 115 YMHQRGYFHRDLKPENLLVS---KDTI-KIADFGLAREINSR----PPFTEYVSTRWYRA 166
++H HRD+KPENLL + KD + K+ DFG A+E P +T Y Y A
Sbjct: 124 FLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-----YVA 178
Query: 167 PEVLLQSYLYSSKVDMWAMGAIMAELIT-LRPLFPGTSEADEIYKICSVIGTPTQDSWAD 225
PEVL Y DMW++G IM L+ P + T +A +
Sbjct: 179 PEVLGPEK-YDKSCDMWSLGVIMYILLCGFPPFYSNTGQA-----------------ISP 220
Query: 226 GL-LLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
G+ R Y FP +S +DA LI L DP++R T + + HP+
Sbjct: 221 GMKRRIRLGQYGFPNPEWSEVS-------EDAKQLIRLLLKTDPTERLTITQFMNHPW 271
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 26/206 (12%)
Query: 8 KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKY-YSWEECVNL--REVKSLRKMSHPNIVK 64
++G+G FG V++ + VA+KK+ + EE +E+K + K H N+V+
Sbjct: 37 NKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 94
Query: 65 LKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQ------VFQGLAYMHQ 118
L + D L V+ YM + DR C +W + G+ ++H+
Sbjct: 95 LLGFSSDGDDLCLVYVYMPNGS---LLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 151
Query: 119 RGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLL 171
+ HRD+K N+L+ + T KI+DFGLAR + F + V T Y APE L
Sbjct: 152 NHHIHRDIKSANILLDEAFTAKISDFGLAR---ASEKFAQTVMXXRIVGTTAYMAPEALR 208
Query: 172 QSYLYSSKVDMWAMGAIMAELITLRP 197
+ K D+++ G ++ E+IT P
Sbjct: 209 GE--ITPKSDIYSFGVVLLEIITGLP 232
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 103/210 (49%), Gaps = 23/210 (10%)
Query: 2 ERY-KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRK 56
ER+ K I ++G G FGSV + + +G +VA+K+++ + RE++ L+
Sbjct: 9 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ-REIQILKA 67
Query: 57 MSHPNIVKLKEVI--RENDILYFVFEYMECNLYQLMKDREKC-FSEAEVRNWCFQVFQGL 113
+ IVK + V L V EY+ + R + + + + Q+ +G+
Sbjct: 68 LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 127
Query: 114 AYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTR--------WY 164
Y+ R HRDL N+LV S+ +KIADFGLA+ + P +Y R WY
Sbjct: 128 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL---PLDKDYYVVREPGQSPIFWY 184
Query: 165 RAPEVLLQSYLYSSKVDMWAMGAIMAELIT 194
APE L + ++S + D+W+ G ++ EL T
Sbjct: 185 -APESLSDN-IFSRQSDVWSFGVVLYELFT 212
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 15/202 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK +G G FG+V++ + GE VAIK++++ L E + + +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
P++ +L + + + L +++ + + NWC Q+ +G+ Y+ R
Sbjct: 74 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDR 133
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLLQ 172
HRDL N+LV + +KI DFGLA+ + + EY V +W +L +
Sbjct: 134 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE--KEYHAEGGKVPIKWMALESILHR 191
Query: 173 SYLYSSKVDMWAMGAIMAELIT 194
Y + S D+W+ G + EL+T
Sbjct: 192 IYTHQS--DVWSYGVTVWELMT 211
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 120/284 (42%), Gaps = 35/284 (12%)
Query: 7 IKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSH--PNIVK 64
+ E+G GT G VW+ +++G V+A+K+M++ E L ++ + K SH P IV+
Sbjct: 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLK-SHDCPYIVQ 88
Query: 65 LKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR-GYFH 123
N ++ E M +L K + E + + + L Y+ ++ G H
Sbjct: 89 CFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIH 148
Query: 124 RDLKPENLLVS-KDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVL----LQSYLYSS 178
RD+KP N+L+ + IK+ DFG++ + Y APE + Y
Sbjct: 149 RDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDI 208
Query: 179 KVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYKFP 238
+ D+W++G + EL T + FP YK C D +L + + + P
Sbjct: 209 RADVWSLGISLVELATGQ--FP--------YKNCKT----------DFEVLTKVLQEEPP 248
Query: 239 QLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPF 282
L G + D S + + D KRP + L+H F
Sbjct: 249 LLPG------HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSF 286
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 133/308 (43%), Gaps = 60/308 (19%)
Query: 2 ERYKLIKEVGDGTFGSVWRA----ISKQSG-EVVAIKKMKKKYYSWEECVNLREVKSLRK 56
+R L K +G G FG V A I K + VA+K +K+ E + E+K L
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 57 MSHP-NIVKL-KEVIRENDILYFVFEYME-CNL-------------YQLMKDREKCFSEA 100
+ H N+V L + L + E+ + NL Y+ +D K F
Sbjct: 88 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTL 147
Query: 101 E-VRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTEY 158
E + + FQV +G+ ++ R HRDL N+L+S K+ +KI DFGLAR+I P
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 159 VSTRW---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPL-FPGTSEADEIYKICSV 214
R + APE + +Y+ + D+W+ G ++ E+ +L +PG +E C
Sbjct: 208 GDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRR 263
Query: 215 IGTPTQDSWADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSW--DPSKRP 272
+ T+ RA +Y P++ L W +PS+RP
Sbjct: 264 LKEGTR---------MRAPDYTTPEMYQTMLDC------------------WHGEPSQRP 296
Query: 273 TAAEALQH 280
T +E ++H
Sbjct: 297 TFSELVEH 304
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 123/295 (41%), Gaps = 42/295 (14%)
Query: 7 IKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVK-SLRKMSHPNIVKL 65
I E+G G +G V + SG++ A+K+++ S E+ L ++ S R + P V
Sbjct: 39 IXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTF 98
Query: 66 -KEVIRENDILYFVFEYMECNL---YQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR-G 120
+ RE D+ + E + +L Y+ + D+ + E + + + L ++H +
Sbjct: 99 YGALFREGDV-WICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS 157
Query: 121 YFHRDLKPENLLVSK-DTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVL---LQSYLY 176
HRD+KP N+L++ +K DFG++ + + Y APE + L Y
Sbjct: 158 VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGY 217
Query: 177 SSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVIGTPTQDSWADGLLLARAINYK 236
S K D+W++G EL LR FP S GTP Q L + +
Sbjct: 218 SVKSDIWSLGITXIELAILR--FPYDS-----------WGTPFQQ-------LKQVVEEP 257
Query: 237 FPQLVGVPLSVLMPSANKDAVSLIASLCSWDPSKRPTAAEALQHPFSRVAFMFHH 291
PQL S + V + + +RPT E QHPF F H
Sbjct: 258 SPQLPADKFSA-------EFVDFTSQCLKKNSKERPTYPELXQHPF----FTLHE 301
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 103/210 (49%), Gaps = 23/210 (10%)
Query: 2 ERY-KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRK 56
ER+ K I ++G G FGSV + + +G +VA+K+++ + RE++ L+
Sbjct: 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ-REIQILKA 80
Query: 57 MSHPNIVKLKEVI--RENDILYFVFEYMECNLYQLMKDREKC-FSEAEVRNWCFQVFQGL 113
+ IVK + V L V EY+ + R + + + + Q+ +G+
Sbjct: 81 LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 140
Query: 114 AYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTR--------WY 164
Y+ R HRDL N+LV S+ +KIADFGLA+ + P +Y R WY
Sbjct: 141 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL---PLDKDYYVVREPGQSPIFWY 197
Query: 165 RAPEVLLQSYLYSSKVDMWAMGAIMAELIT 194
APE L + ++S + D+W+ G ++ EL T
Sbjct: 198 -APESLSDN-IFSRQSDVWSFGVVLYELFT 225
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK +G G FG+V++ + GE VAIK++++ L E + + +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
P++ +L + + + L +++ + + NWC Q+ +G+ Y+ R
Sbjct: 83 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 142
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLLQ 172
HRDL N+LV + +KI DFGLA+ + + EY V +W +L +
Sbjct: 143 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE--KEYHAEGGKVPIKWMALESILHR 200
Query: 173 SYLYSSKVDMWAMGAIMAELITL 195
Y + S D+W+ G + EL+T
Sbjct: 201 IYTHQS--DVWSYGVTVWELMTF 221
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 15/210 (7%)
Query: 10 VGDGTFGSVWRA-ISKQSGEVV--AIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLK 66
+G G FG V+ + G+ + A+K + + E L E ++ SHPN++ L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 67 EV-IRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHR 124
+ +R V YM+ +L +++ + ++ + QV +G+ Y+ + + HR
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 176
Query: 125 DLKPEN-LLVSKDTIKIADFGLAREINSRPPFTEYVST------RWYRAPEVLLQSYLYS 177
DL N +L K T+K+ADFGLAR++ + ++ + T +W LQ+ ++
Sbjct: 177 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQKFT 234
Query: 178 SKVDMWAMGAIMAELITL-RPLFPGTSEAD 206
+K D+W+ G ++ EL+T P +P + D
Sbjct: 235 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 264
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 14/221 (6%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLR---EVKSLRKMS 58
+RY+L + +G G V A + VA+K ++ + + LR E ++ ++
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADL-ARDPSFYLRFRREAQNAAALN 70
Query: 59 HPNIVKLKEV----IRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
HP IV + + + Y V EY++ + + E + Q L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 115 YMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREI----NSRPPFTEYVSTRWYRAPEV 169
+ HQ G HRD+KP N+++S + +K+ DFG+AR I NS + T Y +PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYK 210
+ ++ D++++G ++ E++T P F G S Y+
Sbjct: 191 ARGDSV-DARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK +G G FG+V++ + GE VAIK++++ L E + + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
P++ +L + + + L +++ + + NWC Q+ +G+ Y+ R
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLLQ 172
HRDL N+LV + +KI DFGLA+ + + EY V +W +L +
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE--KEYHAEGGKVPIKWMALESILHR 197
Query: 173 SYLYSSKVDMWAMGAIMAELITL 195
Y + S D+W+ G + EL+T
Sbjct: 198 IYTHQS--DVWSYGVTVWELMTF 218
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 110/224 (49%), Gaps = 36/224 (16%)
Query: 6 LIKEVGDGTFGSVWRAIS-----KQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHP 60
L K +G+G FG V +A + + VA+K +K+ E L E L++++HP
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 61 NIVKLKEVIRENDILYFVFEYME-CNLYQLMKDR-----------------------EKC 96
+++KL ++ L + EY + +L +++ E+
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 97 FSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRPPF 155
+ ++ ++ +Q+ QG+ Y+ + HRDL N+LV++ +KI+DFGL+R++
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 156 TE----YVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITL 195
+ + +W A E L ++Y+++ D+W+ G ++ E++TL
Sbjct: 207 VKRSQGRIPVKWM-AIESLF-DHIYTTQSDVWSFGVLLWEIVTL 248
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 15/210 (7%)
Query: 10 VGDGTFGSVWRA-ISKQSGEVV--AIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLK 66
+G G FG V+ + G+ + A+K + + E L E ++ SHPN++ L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 67 EV-IRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHR 124
+ +R V YM+ +L +++ + ++ + QV +G+ Y+ + + HR
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 175
Query: 125 DLKPEN-LLVSKDTIKIADFGLAREINSRPPFTEYVST------RWYRAPEVLLQSYLYS 177
DL N +L K T+K+ADFGLAR++ + ++ + T +W LQ+ ++
Sbjct: 176 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQKFT 233
Query: 178 SKVDMWAMGAIMAELITL-RPLFPGTSEAD 206
+K D+W+ G ++ EL+T P +P + D
Sbjct: 234 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 263
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK +G G FG+V++ + GE VAIK++++ L E + + +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
P++ +L + + + L +++ + + NWC Q+ +G+ Y+ R
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLLQ 172
HRDL N+LV + +KI DFGLA+ + + EY V +W +L +
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE--KEYHAEGGKVPIKWMALESILHR 201
Query: 173 SYLYSSKVDMWAMGAIMAELITL 195
Y + S D+W+ G + EL+T
Sbjct: 202 IYTHQS--DVWSYGVTVWELMTF 222
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK +G G FG+V++ + GE VAIK++++ L E + + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
P++ +L + + + L +++ + + NWC Q+ +G+ Y+ R
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLLQ 172
HRDL N+LV + +KI DFGLA+ + + EY V +W +L +
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE--KEYHAEGGKVPIKWMALESILHR 197
Query: 173 SYLYSSKVDMWAMGAIMAELITL 195
Y + S D+W+ G + EL+T
Sbjct: 198 IYTHQS--DVWSYGVTVWELMTF 218
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 15/210 (7%)
Query: 10 VGDGTFGSVWRA-ISKQSGEVV--AIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLK 66
+G G FG V+ + G+ + A+K + + E L E ++ SHPN++ L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 67 EV-IRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHR 124
+ +R V YM+ +L +++ + ++ + QV +G+ Y+ + + HR
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 149
Query: 125 DLKPEN-LLVSKDTIKIADFGLAREINSRPPFTEYVST------RWYRAPEVLLQSYLYS 177
DL N +L K T+K+ADFGLAR++ + ++ + T +W LQ+ ++
Sbjct: 150 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQKFT 207
Query: 178 SKVDMWAMGAIMAELITL-RPLFPGTSEAD 206
+K D+W+ G ++ EL+T P +P + D
Sbjct: 208 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 237
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK +G G FG+V++ + GE VAIK++++ L E + + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
P++ +L + + + L +++ + + NWC Q+ +G+ Y+ R
Sbjct: 79 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLLQ 172
HRDL N+LV + +KI DFGLA+ + + EY V +W +L +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE--KEYHAEGGKVPIKWMALESILHR 196
Query: 173 SYLYSSKVDMWAMGAIMAELITL 195
Y + S D+W+ G + EL+T
Sbjct: 197 IYTHQS--DVWSYGVTVWELMTF 217
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 103/210 (49%), Gaps = 23/210 (10%)
Query: 2 ERY-KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRK 56
ER+ K I ++G G FGSV + + +G +VA+K+++ + RE++ L+
Sbjct: 10 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ-REIQILKA 68
Query: 57 MSHPNIVKLKEVI--RENDILYFVFEYMECNLYQLMKDREKC-FSEAEVRNWCFQVFQGL 113
+ IVK + V L V EY+ + R + + + + Q+ +G+
Sbjct: 69 LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 128
Query: 114 AYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEYVSTR--------WY 164
Y+ R HRDL N+LV S+ +KIADFGLA+ + P +Y R WY
Sbjct: 129 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL---PLDKDYYVVREPGQSPIFWY 185
Query: 165 RAPEVLLQSYLYSSKVDMWAMGAIMAELIT 194
APE L + ++S + D+W+ G ++ EL T
Sbjct: 186 -APESLSDN-IFSRQSDVWSFGVVLYELFT 213
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 14/210 (6%)
Query: 8 KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLR-EVKSLRKMSHPNIVKLK 66
+ +G G+FG+V++ K G+V A+K + + ++ + EV LRK H NI+ L
Sbjct: 14 QRIGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 69
Query: 67 EVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRD 125
L V ++ E +LY + E F ++ + Q QG+ Y+H + HRD
Sbjct: 70 MGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 129
Query: 126 LKPENLLVSKD-TIKIADFGLAREINSR----PPFTEYVSTRWYRAPEV--LLQSYLYSS 178
LK N+ + +D T+KI DFGLA + SR F + + + APEV + YS
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 179 KVDMWAMGAIMAELITLRPLFPGTSEADEI 208
+ D++A G ++ EL+T + + + D+I
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK +G G FG+V++ + GE VAIK++++ L E + + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
P++ +L + + + L +++ + + NWC Q+ +G+ Y+ R
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLLQ 172
HRDL N+LV + +KI DFGLA+ + + EY V +W +L +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE--KEYHAEGGKVPIKWMALESILHR 194
Query: 173 SYLYSSKVDMWAMGAIMAELITL 195
Y + S D+W+ G + EL+T
Sbjct: 195 IYTHQS--DVWSYGVTVWELMTF 215
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK +G G FG+V++ + GE VAIK++++ L E + + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
P++ +L + + + L +++ + + NWC Q+ +G+ Y+ R
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLLQ 172
HRDL N+LV + +KI DFGLA+ + + EY V +W +L +
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE--KEYHAEGGKVPIKWMALESILHR 197
Query: 173 SYLYSSKVDMWAMGAIMAELITL 195
Y + S D+W+ G + EL+T
Sbjct: 198 IYTHQS--DVWSYGVTVWELMTF 218
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 104/209 (49%), Gaps = 27/209 (12%)
Query: 10 VGDGTFGSVWRAISKQSG--EVVAIKKMKKKYYSWEECVNLR-EVKSLRKMSH-PNIVKL 65
+G+G FG V +A K+ G AIK+MK+ Y S ++ + E++ L K+ H PNI+ L
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 66 KEVIRENDILYFVFEYM-ECNLYQLMKDRE---------------KCFSEAEVRNWCFQV 109
LY EY NL ++ S ++ ++ V
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 151
Query: 110 FQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAR--EINSRPPFTEYVSTRWYRA 166
+G+ Y+ Q+ + HRDL N+LV ++ + KIADFGL+R E+ + + RW A
Sbjct: 152 ARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGR-LPVRWM-A 209
Query: 167 PEVLLQSYLYSSKVDMWAMGAIMAELITL 195
E L S +Y++ D+W+ G ++ E+++L
Sbjct: 210 IESLNYS-VYTTNSDVWSYGVLLWEIVSL 237
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 104/209 (49%), Gaps = 27/209 (12%)
Query: 10 VGDGTFGSVWRAISKQSG--EVVAIKKMKKKYYSWEECVNLR-EVKSLRKMSH-PNIVKL 65
+G+G FG V +A K+ G AIK+MK+ Y S ++ + E++ L K+ H PNI+ L
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 66 KEVIRENDILYFVFEYM-ECNLYQLMKDRE---------------KCFSEAEVRNWCFQV 109
LY EY NL ++ S ++ ++ V
Sbjct: 82 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 141
Query: 110 FQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAR--EINSRPPFTEYVSTRWYRA 166
+G+ Y+ Q+ + HRDL N+LV ++ + KIADFGL+R E+ + + RW A
Sbjct: 142 ARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGR-LPVRWM-A 199
Query: 167 PEVLLQSYLYSSKVDMWAMGAIMAELITL 195
E L S +Y++ D+W+ G ++ E+++L
Sbjct: 200 IESLNYS-VYTTNSDVWSYGVLLWEIVSL 227
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 15/210 (7%)
Query: 10 VGDGTFGSVWRA-ISKQSGEVV--AIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLK 66
+G G FG V+ + G+ + A+K + + E L E ++ SHPN++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 67 EV-IRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHR 124
+ +R V YM+ +L +++ + ++ + QV +G+ Y+ + + HR
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 155
Query: 125 DLKPEN-LLVSKDTIKIADFGLAREINSRPPFTEYVST------RWYRAPEVLLQSYLYS 177
DL N +L K T+K+ADFGLAR++ + ++ + T +W LQ+ ++
Sbjct: 156 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQKFT 213
Query: 178 SKVDMWAMGAIMAELITL-RPLFPGTSEAD 206
+K D+W+ G ++ EL+T P +P + D
Sbjct: 214 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 243
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 15/210 (7%)
Query: 10 VGDGTFGSVWRA-ISKQSGEVV--AIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLK 66
+G G FG V+ + G+ + A+K + + E L E ++ SHPN++ L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 67 EV-IRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHR 124
+ +R V YM+ +L +++ + ++ + QV +G+ Y+ + + HR
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 154
Query: 125 DLKPEN-LLVSKDTIKIADFGLAREINSRPPFTEYVST------RWYRAPEVLLQSYLYS 177
DL N +L K T+K+ADFGLAR++ + ++ + T +W LQ+ ++
Sbjct: 155 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQKFT 212
Query: 178 SKVDMWAMGAIMAELITL-RPLFPGTSEAD 206
+K D+W+ G ++ EL+T P +P + D
Sbjct: 213 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 242
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 14/210 (6%)
Query: 8 KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLR-EVKSLRKMSHPNIVKLK 66
+ +G G+FG+V++ K G+V A+K + + ++ + EV LRK H NI+ L
Sbjct: 42 QRIGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 97
Query: 67 EVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRD 125
L V ++ E +LY + E F ++ + Q QG+ Y+H + HRD
Sbjct: 98 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 157
Query: 126 LKPENLLVSKD-TIKIADFGLAREINSR----PPFTEYVSTRWYRAPEV--LLQSYLYSS 178
LK N+ + +D T+KI DFGLA + SR F + + + APEV + YS
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 179 KVDMWAMGAIMAELITLRPLFPGTSEADEI 208
+ D++A G ++ EL+T + + + D+I
Sbjct: 217 QSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 15/210 (7%)
Query: 10 VGDGTFGSVWRA-ISKQSGEVV--AIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLK 66
+G G FG V+ + G+ + A+K + + E L E ++ SHPN++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 67 EV-IRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHR 124
+ +R V YM+ +L +++ + ++ + QV +G+ Y+ + + HR
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 157
Query: 125 DLKPEN-LLVSKDTIKIADFGLAREINSRPPFTEYVST------RWYRAPEVLLQSYLYS 177
DL N +L K T+K+ADFGLAR++ + ++ + T +W LQ+ ++
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQKFT 215
Query: 178 SKVDMWAMGAIMAELITL-RPLFPGTSEAD 206
+K D+W+ G ++ EL+T P +P + D
Sbjct: 216 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 245
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 14/210 (6%)
Query: 8 KEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLR-EVKSLRKMSHPNIVKLK 66
+ +G G+FG+V++ K G+V A+K + + ++ + EV LRK H NI+ L
Sbjct: 41 QRIGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 96
Query: 67 EVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRD 125
L V ++ E +LY + E F ++ + Q QG+ Y+H + HRD
Sbjct: 97 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 156
Query: 126 LKPENLLVSKD-TIKIADFGLAREINSR----PPFTEYVSTRWYRAPEV--LLQSYLYSS 178
LK N+ + +D T+KI DFGLA + SR F + + + APEV + YS
Sbjct: 157 LKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 215
Query: 179 KVDMWAMGAIMAELITLRPLFPGTSEADEI 208
+ D++A G ++ EL+T + + + D+I
Sbjct: 216 QSDVYAFGIVLYELMTGQLPYSNINNRDQI 245
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 15/210 (7%)
Query: 10 VGDGTFGSVWRA-ISKQSGEVV--AIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLK 66
+G G FG V+ + G+ + A+K + + E L E ++ SHPN++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 67 EV-IRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHR 124
+ +R V YM+ +L +++ + ++ + QV +G+ Y+ + + HR
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 156
Query: 125 DLKPEN-LLVSKDTIKIADFGLAREINSRPPFTEYVST------RWYRAPEVLLQSYLYS 177
DL N +L K T+K+ADFGLAR++ + ++ + T +W LQ+ ++
Sbjct: 157 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQKFT 214
Query: 178 SKVDMWAMGAIMAELITL-RPLFPGTSEAD 206
+K D+W+ G ++ EL+T P +P + D
Sbjct: 215 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 244
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 15/210 (7%)
Query: 10 VGDGTFGSVWRA-ISKQSGEVV--AIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLK 66
+G G FG V+ + G+ + A+K + + E L E ++ SHPN++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 67 EV-IRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHR 124
+ +R V YM+ +L +++ + ++ + QV +G+ Y+ + + HR
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 157
Query: 125 DLKPEN-LLVSKDTIKIADFGLAREINSRPPFTEYVST------RWYRAPEVLLQSYLYS 177
DL N +L K T+K+ADFGLAR++ + ++ + T +W LQ+ ++
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQKFT 215
Query: 178 SKVDMWAMGAIMAELITL-RPLFPGTSEAD 206
+K D+W+ G ++ EL+T P +P + D
Sbjct: 216 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 245
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 15/210 (7%)
Query: 10 VGDGTFGSVWRA-ISKQSGEVV--AIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLK 66
+G G FG V+ + G+ + A+K + + E L E ++ SHPN++ L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 67 EV-IRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHR 124
+ +R V YM+ +L +++ + ++ + QV +G+ Y+ + + HR
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 152
Query: 125 DLKPEN-LLVSKDTIKIADFGLAREINSRPPFTEYVST------RWYRAPEVLLQSYLYS 177
DL N +L K T+K+ADFGLAR++ + ++ + T +W LQ+ ++
Sbjct: 153 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQKFT 210
Query: 178 SKVDMWAMGAIMAELITL-RPLFPGTSEAD 206
+K D+W+ G ++ EL+T P +P + D
Sbjct: 211 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 240
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK +G G FG+V++ + GE VAIK++++ L E + + +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
P++ +L + + + L +++ + + NWC Q+ +G+ Y+ R
Sbjct: 102 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 161
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLLQ 172
HRDL N+LV + +KI DFGLA+ + + EY V +W +L +
Sbjct: 162 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE--KEYHAEGGKVPIKWMALESILHR 219
Query: 173 SYLYSSKVDMWAMGAIMAELITL 195
Y + S D+W+ G + EL+T
Sbjct: 220 IYTHQS--DVWSYGVTVWELMTF 240
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 15/202 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVV----AIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK +G G FG+V++ + GE V AIK++++ L E + + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
P++ +L + + + L +++ + + NWC Q+ +G+ Y+ R
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLLQ 172
HRDL N+LV + +KI DFGLA+ + + EY V +W +L +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE--KEYHAEGGKVPIKWMALESILHR 194
Query: 173 SYLYSSKVDMWAMGAIMAELIT 194
Y + S D+W+ G + EL+T
Sbjct: 195 IYTHQS--DVWSYGVTVWELMT 214
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVV----AIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK +G G FG+V++ + GE V AIK++++ L E + + +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
P++ +L + + + L +++ + + NWC Q+ +G+ Y+ R
Sbjct: 71 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 130
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLLQ 172
HRDL N+LV + +KI DFGLA+ + + EY V +W +L +
Sbjct: 131 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE--KEYHAEGGKVPIKWMALESILHR 188
Query: 173 SYLYSSKVDMWAMGAIMAELITL 195
Y + S D+W+ G + EL+T
Sbjct: 189 IYTHQS--DVWSYGVTVWELMTF 209
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK +G G FG+V++ + GE VAIK++++ L E + + +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
P++ +L + + + L +++ + + NWC Q+ +G+ Y+ R
Sbjct: 87 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 146
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLLQ 172
HRDL N+LV + +KI DFGLA+ + + EY V +W +L +
Sbjct: 147 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE--KEYHAEGGKVPIKWMALESILHR 204
Query: 173 SYLYSSKVDMWAMGAIMAELITL 195
Y + S D+W+ G + EL+T
Sbjct: 205 IYTHQS--DVWSYGVTVWELMTF 225
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 14/221 (6%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLR---EVKSLRKMS 58
+RY+L + +G G V A + VA+K ++ + + LR E ++ ++
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADL-ARDPSFYLRFRREAQNAAALN 70
Query: 59 HPNIVKL----KEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
HP IV + + + Y V EY++ + + E + Q L
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 115 YMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREI----NSRPPFTEYVSTRWYRAPEV 169
+ HQ G HRD+KP N+++S + +K+ DFG+AR I NS + T Y +PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 170 LLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYK 210
+ ++ D++++G ++ E++T P F G S Y+
Sbjct: 191 ARGDSV-DARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 101/220 (45%), Gaps = 27/220 (12%)
Query: 6 LIKEVGDGTFGSVWRAISKQSGEV---VAIKKMKKKYYSWEECVN-LREVKSLRKMSHPN 61
L K +G+G FGSV KQ VA+K MK S E L E ++ SHPN
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97
Query: 62 IVKLKEVIREND---------ILYFVFEYMECN---LYQLMKDREKCFSEAEVRNWCFQV 109
+++L V E IL F+ +Y + + LY ++ K + + +
Sbjct: 98 VIRLLGVCIEMSSQGIPKPMVILPFM-KYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDI 156
Query: 110 FQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----RPPFTEYVSTRWY 164
G+ Y+ R + HRDL N ++ D T+ +ADFGL+++I S R + +W
Sbjct: 157 ALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 165 RAPEVLLQSYLYSSKVDMWAMGAIMAELIT--LRPLFPGT 202
L +Y+SK D+WA G M E+ T + P +PG
Sbjct: 217 AIES--LADRVYTSKSDVWAFGVTMWEIATRGMTP-YPGV 253
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 22/214 (10%)
Query: 2 ERYKLIKEVGDGTFGSVW----RAISKQSGEV-VAIKKMKKKYYSWEECVNLREVKSLRK 56
E+ L++E+G G+FG V+ R I K E VA+K + + E L E ++
Sbjct: 18 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 77
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYM-----ECNLYQLMKDREKCFSEA-----EVRNWC 106
+ ++V+L V+ + V E M + L L + E E+
Sbjct: 78 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 137
Query: 107 FQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----RPPFTEYVST 161
++ G+AY++ + + HR+L N +V+ D T+KI DFG+ R+I R +
Sbjct: 138 AEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 162 RWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITL 195
RW APE L+ ++++ DMW+ G ++ E+ +L
Sbjct: 198 RWM-APES-LKDGVFTTSSDMWSFGVVLWEITSL 229
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 22/214 (10%)
Query: 2 ERYKLIKEVGDGTFGSVW----RAISKQSGEV-VAIKKMKKKYYSWEECVNLREVKSLRK 56
E+ L++E+G G+FG V+ R I K E VA+K + + E L E ++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYM-----ECNLYQLMKDREKCFSEA-----EVRNWC 106
+ ++V+L V+ + V E M + L L + E E+
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 107 FQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----RPPFTEYVST 161
++ G+AY++ + + HR+L N +V+ D T+KI DFG+ R+I R +
Sbjct: 137 AEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 196
Query: 162 RWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITL 195
RW APE L+ ++++ DMW+ G ++ E+ +L
Sbjct: 197 RWM-APES-LKDGVFTTSSDMWSFGVVLWEITSL 228
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 103/210 (49%), Gaps = 15/210 (7%)
Query: 10 VGDGTFGSVWRA-ISKQSGEVV--AIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLK 66
+G G FG V+ + G+ + A+K + + E L E ++ SHPN++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 67 EV-IRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHR 124
+ +R V YM+ +L +++ + ++ + QV +G+ Y+ + + HR
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 156
Query: 125 DLKPEN-LLVSKDTIKIADFGLAREINSRPPFTEYVST------RWYRAPEVLLQSYLYS 177
DL N +L K T+K+ADFGLAR++ + + + T +W LQ+ ++
Sbjct: 157 DLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES--LQTQKFT 214
Query: 178 SKVDMWAMGAIMAELITL-RPLFPGTSEAD 206
+K D+W+ G ++ EL+T P +P + D
Sbjct: 215 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 244
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E E +L+ + +R E R++ +QV + +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 123
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 124 RHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 182
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMV 204
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E E +L+ + +R E R++ +QV + +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 156
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 215
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMV 237
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 111/213 (52%), Gaps = 16/213 (7%)
Query: 6 LIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLR-EVKSLRKMSHPNIVK 64
L +G G+FG+V++ K G+V A+K +K + E+ R EV LRK H NI+
Sbjct: 40 LSTRIGSGSFGTVYKG--KWHGDV-AVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILL 96
Query: 65 LKEVIRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFH 123
+ + D L V ++ E +LY+ + +E F ++ + Q QG+ Y+H + H
Sbjct: 97 FMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIH 155
Query: 124 RDLKPENLLVSKD-TIKIADFGLAREINSRPPFTEYV-----STRWYRAPEV--LLQSYL 175
RD+K N+ + + T+KI DFGLA + SR ++ V S W APEV + +
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLA-TVKSRWSGSQQVEQPTGSVLWM-APEVIRMQDNNP 213
Query: 176 YSSKVDMWAMGAIMAELITLRPLFPGTSEADEI 208
+S + D+++ G ++ EL+T + + D+I
Sbjct: 214 FSFQSDVYSYGIVLYELMTGELPYSHINNRDQI 246
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E E +L+ + +R E R++ +QV + +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 155
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 214
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMV 236
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E E +L+ + +R E R++ +QV + +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 156
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 215
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMV 237
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E E +L+ + +R E R++ +QV + +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 156
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 215
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMV 237
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 57 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 116
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E E +L+ + +R E R++ +QV + +
Sbjct: 117 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 175
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 176 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 234
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 235 YHRYHGRSAAVWSLGILLYDMV 256
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E E +L+ + +R E R++ +QV + +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 155
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 214
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMV 236
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E E +L+ + +R E R++ +QV + +
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 170
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 229
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMV 251
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E E +L+ + +R E R++ +QV + +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 156
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 215
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMV 237
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E E +L+ + +R E R++ +QV + +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 155
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 214
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMV 236
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E E +L+ + +R E R++ +QV + +
Sbjct: 104 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 162
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 163 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 221
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 222 YHRYHGRSAAVWSLGILLYDMV 243
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E E +L+ + +R E R++ +QV + +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 155
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 214
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMV 236
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E E +L+ + +R E R++ +QV + +
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 170
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 229
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMV 251
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E E +L+ + +R E R++ +QV + +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 143
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 202
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMV 224
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E E +L+ + +R E R++ +QV + +
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 142
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 143 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 201
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMV 223
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E E +L+ + +R E R++ +QV + +
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 142
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 143 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 201
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMV 223
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E E +L+ + +R E R++ +QV + +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 143
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 202
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMV 224
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E E +L+ + +R E R++ +QV + +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 143
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 202
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMV 224
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 31/214 (14%)
Query: 2 ERY-KLIKEVGDGTFGSV----WRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRK 56
ER+ K I ++G G FGSV + + +G +VA+K+++ + RE++ L+
Sbjct: 6 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ-REIQILKA 64
Query: 57 MSHPNIVKLKEVI--RENDILYFVFEYMECNLYQLMKDREKC-FSEAEVRNWCFQVFQGL 113
+ IVK + V L V EY+ + R + + + + Q+ +G+
Sbjct: 65 LHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 124
Query: 114 AYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLA------------REINSRPPFTEYVS 160
Y+ R HRDL N+LV S+ +KIADFGLA RE P F
Sbjct: 125 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIF----- 179
Query: 161 TRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELIT 194
WY APE L + ++S + D+W+ G ++ EL T
Sbjct: 180 --WY-APESLSDN-IFSRQSDVWSFGVVLYELFT 209
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 32 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 91
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E E +L+ + +R E R++ +QV + +
Sbjct: 92 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 150
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 151 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 209
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 210 YHRYHGRSAAVWSLGILLYDMV 231
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E E +L+ + +R E R++ +QV + +
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 127
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 186
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMV 208
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK--------KYYSWEECVNLREVKS 53
E Y ++K +G G FG V K S +V A+K + K + WEE R++ +
Sbjct: 75 EDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEE----RDIMA 130
Query: 54 LRKMSHPNIVKLKEVIRENDILYFVFEYMEC-NLYQLMKDREKCFSEAEVRNWCFQVFQG 112
+ P +V+L +++ LY V EYM +L LM + + E + + +V
Sbjct: 131 F--ANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD--VPEKWAKFYTAEVVLA 186
Query: 113 LAYMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPF--TEYVSTRWYRAPEV 169
L +H G HRD+KP+N+L+ K +K+ADFG +++ V T Y +PEV
Sbjct: 187 LDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEV 246
Query: 170 LLQ---SYLYSSKVDMWAMGAIMAELIT 194
L Y + D W++G + E++
Sbjct: 247 LKSQGGDGYYGRECDWWSVGVFLFEMLV 274
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E E +L+ + +R E R++ +QV + +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 128
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 187
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMV 209
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E E +L+ + +R E R++ +QV + +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 123
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 182
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMV 204
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E E +L+ + +R E R++ +QV + +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 128
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 187
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMV 209
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E E +L+ + +R E R++ +QV + +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 128
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 187
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMV 209
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK +G G FG+V++ + GE VAIK++++ L E + + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 60 PNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
P++ +L + + + + + M L +++ + + NWC Q+ +G+ Y+
Sbjct: 79 PHVCRLLGICLTSTV-QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 119 RGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLL 171
R HRDL N+LV + +KI DFG A+ + + EY V +W +L
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE--KEYHAEGGKVPIKWMALESILH 195
Query: 172 QSYLYSSKVDMWAMGAIMAELITL 195
+ Y + S D+W+ G + EL+T
Sbjct: 196 RIYTHQS--DVWSYGVTVWELMTF 217
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK +G G FG+V++ + GE VAIK++++ L E + + +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 60 PNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
P++ +L + + + + + M L +++ + + NWC Q+ +G+ Y+
Sbjct: 81 PHVCRLLGICLTSTV-QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 119 RGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLL 171
R HRDL N+LV + +KI DFG A+ + + EY V +W +L
Sbjct: 140 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE--KEYHAEGGKVPIKWMALESILH 197
Query: 172 QSYLYSSKVDMWAMGAIMAELITL 195
+ Y + S D+W+ G + EL+T
Sbjct: 198 RIYTHQS--DVWSYGVTVWELMTF 219
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E E +L+ + +R E R++ +QV + +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 123
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 182
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMV 204
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 114/243 (46%), Gaps = 28/243 (11%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQ-SGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPN 61
+Y++ + G G ++ A+ + +G V +K + + + + + E + L ++ HP+
Sbjct: 81 QYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPS 140
Query: 62 IVKLKEVIREND-----ILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYM 116
IV++ + D + Y V EY+ L + + + AE + ++ L+Y+
Sbjct: 141 IVQIFNFVEHTDRHGDPVGYIVMEYVGGQ--SLKRSKGQKLPVAEAIAYLLEILPALSYL 198
Query: 117 HQRGYFHRDLKPENLLVSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
H G + DLKPEN++++++ +K+ D G INS F T ++APE++
Sbjct: 199 HSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINS---FGYLYGTPGFQAPEIVRTGPTV 255
Query: 177 SSKVDMWAMGAIMAELITLRPL-----FPGTSEADEIYKICSVIGTPTQDSWADGLLLAR 231
++ D++ +G +A L P G E D + K T DS+ G LL R
Sbjct: 256 AT--DIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLK--------TYDSY--GRLLRR 303
Query: 232 AIN 234
AI+
Sbjct: 304 AID 306
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK + G FG+V++ + GE VAIK++++ L E + + +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 60 PNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
P++ +L + + + + + M L +++ + + NWC Q+ +G+ Y+
Sbjct: 84 PHVCRLLGICLTSTV-QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 119 RGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLL 171
R HRDL N+LV + +KI DFGLA+ + + EY V +W +L
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE--KEYHAEGGKVPIKWMALESILH 200
Query: 172 QSYLYSSKVDMWAMGAIMAELIT 194
+ Y + S D+W+ G + EL+T
Sbjct: 201 RIYTHQS--DVWSYGVTVWELMT 221
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK +G G FG+V++ + GE VAIK++++ L E + + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 60 PNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
P++ +L + + + + + M L +++ + + NWC Q+ +G+ Y+
Sbjct: 79 PHVCRLLGICLTSTV-QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 119 RGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLL 171
R HRDL N+LV + +KI DFG A+ + + EY V +W +L
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE--KEYHAEGGKVPIKWMALESILH 195
Query: 172 QSYLYSSKVDMWAMGAIMAELITL 195
+ Y + S D+W+ G + EL+T
Sbjct: 196 RIYTHQS--DVWSYGVTVWELMTF 217
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLR----EVKSLRKM 57
+Y++ +G G FGSV+ I VAIK ++K S W E N EV L+K+
Sbjct: 8 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 67
Query: 58 SH--PNIVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCFSEAEVRNWCFQVFQGL 113
S +++L + D + E E +L+ + +R E R++ +QV + +
Sbjct: 68 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAV 126
Query: 114 AYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLL 171
+ H G HRD+K EN+L+ ++ +K+ DFG + +T++ TR Y PE +
Sbjct: 127 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 185
Query: 172 QSYLYSSKVDMWAMGAIMAELI 193
+ +W++G ++ +++
Sbjct: 186 YHRYHGRSAAVWSLGILLYDMV 207
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 27/209 (12%)
Query: 10 VGDGTFGSVWRAISKQSG--EVVAIKKMKKKYYSWEECVNLR-EVKSLRKMSH-PNIVKL 65
+G+G FG V +A K+ G AIK+MK+ Y S ++ + E++ L K+ H PNI+ L
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 66 KEVIRENDILYFVFEYM-ECNLYQLMKDRE---------------KCFSEAEVRNWCFQV 109
LY EY NL ++ S ++ ++ V
Sbjct: 89 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 148
Query: 110 FQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAR--EINSRPPFTEYVSTRWYRA 166
+G+ Y+ Q+ + HR+L N+LV ++ + KIADFGL+R E+ + + RW A
Sbjct: 149 ARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGR-LPVRWM-A 206
Query: 167 PEVLLQSYLYSSKVDMWAMGAIMAELITL 195
E L S +Y++ D+W+ G ++ E+++L
Sbjct: 207 IESLNYS-VYTTNSDVWSYGVLLWEIVSL 234
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 15/203 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK +G G FG+V++ + GE VAIK++++ L E + + +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
P++ +L + + + L +++ + + NWC Q+ +G+ Y+ R
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLLQ 172
HRDL N+LV + +KI DFG A+ + + EY V +W +L +
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE--KEYHAEGGKVPIKWMALESILHR 201
Query: 173 SYLYSSKVDMWAMGAIMAELITL 195
Y + S D+W+ G + EL+T
Sbjct: 202 IYTHQS--DVWSYGVTVWELMTF 222
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 98/194 (50%), Gaps = 10/194 (5%)
Query: 9 EVGDGTFGSVWRAISKQSGEV--VAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLK 66
E+G G FGSV + + + + VAIK +K+ + +RE + + ++ +P IV+L
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 67 EVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDL 126
V + ++ + L++ + + + + V QV G+ Y+ ++ + HRDL
Sbjct: 77 GVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDL 136
Query: 127 KPEN-LLVSKDTIKIADFGLAREINSRPPFTEYVST-----RWYRAPEVLLQSYLYSSKV 180
N LLV++ KI+DFGL++ + + + S +WY APE + +SS+
Sbjct: 137 AARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY-APEC-INFRKFSSRS 194
Query: 181 DMWAMGAIMAELIT 194
D+W+ G M E ++
Sbjct: 195 DVWSYGVTMWEALS 208
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 22/201 (10%)
Query: 11 GDGTFGSVWRAISKQSGEVVAIKKMKKKY-YSWEECVNL--REVKSLRKMSHPNIVKLKE 67
G+G FG V++ + VA+KK+ + EE +E+K K H N+V+L
Sbjct: 31 GEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLG 88
Query: 68 VIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNW---CFQVFQGLA----YMHQRG 120
+ D L V+ Y + DR C +W C ++ QG A ++H+
Sbjct: 89 FSSDGDDLCLVYVYXPNGS---LLDRLSCLDGTPPLSWHXRC-KIAQGAANGINFLHENH 144
Query: 121 YFHRDLKPENLLVSKD-TIKIADFGLAR---EINSRPPFTEYVSTRWYRAPEVLLQSYLY 176
+ HRD+K N+L+ + T KI+DFGLAR + + V T Y APE L
Sbjct: 145 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGE--I 202
Query: 177 SSKVDMWAMGAIMAELITLRP 197
+ K D+++ G ++ E+IT P
Sbjct: 203 TPKSDIYSFGVVLLEIITGLP 223
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK +G G FG+V++ + GE VAI ++++ L E + + +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 60 PNIVKLKEVIRENDILYFVFEYMECN-LYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQ 118
P++ +L + + + + + M L +++ + + NWC Q+ +G+ Y+
Sbjct: 111 PHVCRLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 169
Query: 119 RGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLL 171
R HRDL N+LV + +KI DFGLA+ + + EY V +W +L
Sbjct: 170 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE--KEYHAEGGKVPIKWMALESILH 227
Query: 172 QSYLYSSKVDMWAMGAIMAELIT 194
+ Y + S D+W+ G + EL+T
Sbjct: 228 RIYTHQS--DVWSYGVTVWELMT 248
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 15/203 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK + G FG+V++ + GE VAIK++++ L E + + +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
P++ +L + + + L +++ + + NWC Q+ +G+ Y+ R
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLLQ 172
HRDL N+LV + +KI DFGLA+ + + EY V +W +L +
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE--KEYHAEGGKVPIKWMALESILHR 201
Query: 173 SYLYSSKVDMWAMGAIMAELITL 195
Y + S D+W+ G + EL+T
Sbjct: 202 IYTHQS--DVWSYGVTVWELMTF 222
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 15/203 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK +G G FG+V++ + GE VAIK++++ L E + + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
P++ +L + + + L +++ + + NWC Q+ +G+ Y+ R
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLLQ 172
HRDL N+LV + +KI DFG A+ + + EY V +W +L +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE--KEYHAEGGKVPIKWMALESILHR 194
Query: 173 SYLYSSKVDMWAMGAIMAELITL 195
Y + S D+W+ G + EL+T
Sbjct: 195 IYTHQS--DVWSYGVTVWELMTF 215
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 15/203 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK +G G FG+V++ + GE VAIK++++ L E + + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
P++ +L + + + L +++ + + NWC Q+ +G+ Y+ R
Sbjct: 79 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLLQ 172
HRDL N+LV + +KI DFG A+ + + EY V +W +L +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE--KEYHAEGGKVPIKWMALESILHR 196
Query: 173 SYLYSSKVDMWAMGAIMAELITL 195
Y + S D+W+ G + EL+T
Sbjct: 197 IYTHQS--DVWSYGVTVWELMTF 217
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 15/203 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGE----VVAIKKMKKKYYSWEECVNLREVKSLRKMSH 59
+K IK + G FG+V++ + GE VAIK++++ L E + + +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 60 PNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQR 119
P++ +L + + + L +++ + + NWC Q+ +G+ Y+ R
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 120 GYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPPFTEY------VSTRWYRAPEVLLQ 172
HRDL N+LV + +KI DFGLA+ + + EY V +W +L +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE--KEYHAEGGKVPIKWMALESILHR 194
Query: 173 SYLYSSKVDMWAMGAIMAELITL 195
Y + S D+W+ G + EL+T
Sbjct: 195 IYTHQS--DVWSYGVTVWELMTF 215
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 98/194 (50%), Gaps = 10/194 (5%)
Query: 9 EVGDGTFGSVWRAISKQSGEV--VAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLK 66
E+G G FGSV + + + + VAIK +K+ + +RE + + ++ +P IV+L
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 67 EVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDL 126
V + ++ + L++ + + + + V QV G+ Y+ ++ + HR+L
Sbjct: 403 GVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNL 462
Query: 127 KPEN-LLVSKDTIKIADFGLAREINSRPPFTEYVST-----RWYRAPEVLLQSYLYSSKV 180
N LLV++ KI+DFGL++ + + + S +WY APE + +SS+
Sbjct: 463 AARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY-APEC-INFRKFSSRS 520
Query: 181 DMWAMGAIMAELIT 194
D+W+ G M E ++
Sbjct: 521 DVWSYGVTMWEALS 534
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 28/211 (13%)
Query: 9 EVGDGTFGSVWRA-----ISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
E+G+G FG V+ A + +Q +VA+K +K+ S + RE + L + H +IV
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ-REAELLTMLQHQHIV 106
Query: 64 KLKEVIRENDILYFVFEYM---ECNLY--------QLMKDREKC----FSEAEVRNWCFQ 108
+ V E L VFEYM + N + +L+ E ++ Q
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 109 VFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----RPPFTEYVSTRW 163
V G+ Y+ + HRDL N LV + +KI DFG++R+I S R + RW
Sbjct: 167 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 226
Query: 164 YRAPEVLLQSYLYSSKVDMWAMGAIMAELIT 194
+L + ++++ D+W+ G ++ E+ T
Sbjct: 227 MPPESILYRK--FTTESDVWSFGVVLWEIFT 255
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 28/211 (13%)
Query: 9 EVGDGTFGSVWRA-----ISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
E+G+G FG V+ A + +Q +VA+K +K+ S + RE + L + H +IV
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ-REAELLTMLQHQHIV 83
Query: 64 KLKEVIRENDILYFVFEYM---ECNLY--------QLMKDREKC----FSEAEVRNWCFQ 108
+ V E L VFEYM + N + +L+ E ++ Q
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 109 VFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----RPPFTEYVSTRW 163
V G+ Y+ + HRDL N LV + +KI DFG++R+I S R + RW
Sbjct: 144 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 203
Query: 164 YRAPEVLLQSYLYSSKVDMWAMGAIMAELIT 194
+L + ++++ D+W+ G ++ E+ T
Sbjct: 204 MPPESILYRK--FTTESDVWSFGVVLWEIFT 232
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 28/211 (13%)
Query: 9 EVGDGTFGSVWRA-----ISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIV 63
E+G+G FG V+ A + +Q +VA+K +K+ S + RE + L + H +IV
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ-REAELLTMLQHQHIV 77
Query: 64 KLKEVIRENDILYFVFEYM---ECNLY--------QLMKDREKC----FSEAEVRNWCFQ 108
+ V E L VFEYM + N + +L+ E ++ Q
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 109 VFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----RPPFTEYVSTRW 163
V G+ Y+ + HRDL N LV + +KI DFG++R+I S R + RW
Sbjct: 138 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 197
Query: 164 YRAPEVLLQSYLYSSKVDMWAMGAIMAELIT 194
+L + ++++ D+W+ G ++ E+ T
Sbjct: 198 MPPESILYRK--FTTESDVWSFGVVLWEIFT 226
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISK-----QSGEVVAIKKMKKKYYSWEECVNLREVKSLRK 56
E+ + +E+G G+FG V+ ++K + VAIK + + E L E +++
Sbjct: 19 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 78
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYM-----ECNLYQLMKDREKCF-----SEAEVRNWC 106
+ ++V+L V+ + + E M + L L + E S +++
Sbjct: 79 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 138
Query: 107 FQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----RPPFTEYVST 161
++ G+AY++ + HRDL N +V++D T+KI DFG+ R+I R +
Sbjct: 139 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 198
Query: 162 RWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITL 195
RW +PE L+ ++++ D+W+ G ++ E+ TL
Sbjct: 199 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATL 230
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISK-----QSGEVVAIKKMKKKYYSWEECVNLREVKSLRK 56
E+ + +E+G G+FG V+ ++K + VAIK + + E L E +++
Sbjct: 10 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 69
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYM-----ECNLYQLMKDREKCF-----SEAEVRNWC 106
+ ++V+L V+ + + E M + L L + E S +++
Sbjct: 70 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 129
Query: 107 FQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----RPPFTEYVST 161
++ G+AY++ + HRDL N +V++D T+KI DFG+ R+I R +
Sbjct: 130 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 189
Query: 162 RWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITL 195
RW +PE L+ ++++ D+W+ G ++ E+ TL
Sbjct: 190 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATL 221
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 103/210 (49%), Gaps = 15/210 (7%)
Query: 10 VGDGTFGSVWRA-ISKQSGEVV--AIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLK 66
+G G FG V+ + G+ + A+K + + E L E ++ SHPN++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 67 EV-IRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHR 124
+ +R V YM+ +L +++ + ++ + QV +G+ ++ + + HR
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 158
Query: 125 DLKPEN-LLVSKDTIKIADFGLAREINSRPPFTEYVST------RWYRAPEVLLQSYLYS 177
DL N +L K T+K+ADFGLAR++ + + + T +W LQ+ ++
Sbjct: 159 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQKFT 216
Query: 178 SKVDMWAMGAIMAELITL-RPLFPGTSEAD 206
+K D+W+ G ++ EL+T P +P + D
Sbjct: 217 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 246
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 103/210 (49%), Gaps = 15/210 (7%)
Query: 10 VGDGTFGSVWRA-ISKQSGEVV--AIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLK 66
+G G FG V+ + G+ + A+K + + E L E ++ SHPN++ L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 67 EV-IRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHR 124
+ +R V YM+ +L +++ + ++ + QV +G+ ++ + + HR
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 216
Query: 125 DLKPEN-LLVSKDTIKIADFGLAREINSRPPFTEYVST------RWYRAPEVLLQSYLYS 177
DL N +L K T+K+ADFGLAR++ + + + T +W LQ+ ++
Sbjct: 217 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQKFT 274
Query: 178 SKVDMWAMGAIMAELITL-RPLFPGTSEAD 206
+K D+W+ G ++ EL+T P +P + D
Sbjct: 275 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 304
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 103/210 (49%), Gaps = 15/210 (7%)
Query: 10 VGDGTFGSVWRA-ISKQSGEVV--AIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLK 66
+G G FG V+ + G+ + A+K + + E L E ++ SHPN++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 67 EV-IRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHR 124
+ +R V YM+ +L +++ + ++ + QV +G+ ++ + + HR
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 157
Query: 125 DLKPEN-LLVSKDTIKIADFGLAREINSRPPFTEYVST------RWYRAPEVLLQSYLYS 177
DL N +L K T+K+ADFGLAR++ + + + T +W LQ+ ++
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQKFT 215
Query: 178 SKVDMWAMGAIMAELITL-RPLFPGTSEAD 206
+K D+W+ G ++ EL+T P +P + D
Sbjct: 216 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 245
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 103/210 (49%), Gaps = 15/210 (7%)
Query: 10 VGDGTFGSVWRA-ISKQSGEVV--AIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLK 66
+G G FG V+ + G+ + A+K + + E L E ++ SHPN++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 67 EV-IRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHR 124
+ +R V YM+ +L +++ + ++ + QV +G+ ++ + + HR
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 157
Query: 125 DLKPEN-LLVSKDTIKIADFGLAREINSRPPFTEYVST------RWYRAPEVLLQSYLYS 177
DL N +L K T+K+ADFGLAR++ + + + T +W LQ+ ++
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQKFT 215
Query: 178 SKVDMWAMGAIMAELITL-RPLFPGTSEAD 206
+K D+W+ G ++ EL+T P +P + D
Sbjct: 216 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 245
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 29/215 (13%)
Query: 6 LIKEVGDGTFGSVWRA-----ISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHP 60
L +E+G+G FG V+ A + +VA+K +K + + RE + L + H
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQ-REAELLTNLQHE 77
Query: 61 NIVKLKEVIRENDILYFVFEYME-CNLYQLMK----------DREKCFSEAEVR-----N 104
+IVK V + D L VFEYM+ +L + ++ D + ++ E+ +
Sbjct: 78 HIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 105 WCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINS----RPPFTEYV 159
Q+ G+ Y+ + + HRDL N LV + +KI DFG++R++ S R +
Sbjct: 138 IASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML 197
Query: 160 STRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELIT 194
RW ++ + ++++ D+W+ G I+ E+ T
Sbjct: 198 PIRWMPPESIMYRK--FTTESDVWSFGVILWEIFT 230
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 103/210 (49%), Gaps = 15/210 (7%)
Query: 10 VGDGTFGSVWRA-ISKQSGEVV--AIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLK 66
+G G FG V+ + G+ + A+K + + E L E ++ SHPN++ L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 67 EV-IRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHR 124
+ +R V YM+ +L +++ + ++ + QV +G+ ++ + + HR
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 162
Query: 125 DLKPEN-LLVSKDTIKIADFGLAREINSRPPFTEYVST------RWYRAPEVLLQSYLYS 177
DL N +L K T+K+ADFGLAR++ + + + T +W LQ+ ++
Sbjct: 163 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQKFT 220
Query: 178 SKVDMWAMGAIMAELITL-RPLFPGTSEAD 206
+K D+W+ G ++ EL+T P +P + D
Sbjct: 221 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 250
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 103/210 (49%), Gaps = 15/210 (7%)
Query: 10 VGDGTFGSVWRA-ISKQSGEVV--AIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLK 66
+G G FG V+ + G+ + A+K + + E L E ++ SHPN++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 67 EV-IRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHR 124
+ +R V YM+ +L +++ + ++ + QV +G+ ++ + + HR
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 155
Query: 125 DLKPEN-LLVSKDTIKIADFGLAREINSRPPFTEYVST------RWYRAPEVLLQSYLYS 177
DL N +L K T+K+ADFGLAR++ + + + T +W LQ+ ++
Sbjct: 156 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQKFT 213
Query: 178 SKVDMWAMGAIMAELITL-RPLFPGTSEAD 206
+K D+W+ G ++ EL+T P +P + D
Sbjct: 214 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 243
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 103/210 (49%), Gaps = 15/210 (7%)
Query: 10 VGDGTFGSVWRA-ISKQSGEVV--AIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLK 66
+G G FG V+ + G+ + A+K + + E L E ++ SHPN++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 67 EV-IRENDILYFVFEYME-CNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHR 124
+ +R V YM+ +L +++ + ++ + QV +G+ ++ + + HR
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 158
Query: 125 DLKPEN-LLVSKDTIKIADFGLAREINSRPPFTEYVST------RWYRAPEVLLQSYLYS 177
DL N +L K T+K+ADFGLAR++ + + + T +W LQ+ ++
Sbjct: 159 DLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES--LQTQKFT 216
Query: 178 SKVDMWAMGAIMAELITL-RPLFPGTSEAD 206
+K D+W+ G ++ EL+T P +P + D
Sbjct: 217 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD 246
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 38/183 (20%)
Query: 104 NWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTR 162
++ FQV +G+ ++ R HRDL N+L+S++ +KI DFGLAR+I P + TR
Sbjct: 203 SYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTR 262
Query: 163 W---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITL-RPLFPGTSEADEIYKICSVIGTP 218
+ APE + +YS+K D+W+ G ++ E+ +L +PG + DE + CS +
Sbjct: 263 LPLKWMAPESIFDK-IYSTKSDVWSYGVLLWEIFSLGGSPYPGV-QMDEDF--CSRL--- 315
Query: 219 TQDSWADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSW--DPSKRPTAAE 276
+G+ + RA Y P++ + L W DP +RP AE
Sbjct: 316 -----REGMRM-RAPEYSTPEIYQIMLDC------------------WHRDPKERPRFAE 351
Query: 277 ALQ 279
++
Sbjct: 352 LVE 354
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISK-----QSGEVVAIKKMKKKYYSWEECVNLREVKSLRK 56
E+ + +E+G G+FG V+ ++K + VAIK + + E L E +++
Sbjct: 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDREKCFSEAEVR---------NWC 106
+ ++V+L V+ + + E M +L ++ + V
Sbjct: 85 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 144
Query: 107 FQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----RPPFTEYVST 161
++ G+AY++ + HRDL N +V++D T+KI DFG+ R+I R +
Sbjct: 145 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 204
Query: 162 RWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITL 195
RW +PE L+ ++++ D+W+ G ++ E+ TL
Sbjct: 205 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATL 236
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 103/214 (48%), Gaps = 22/214 (10%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISK-----QSGEVVAIKKMKKKYYSWEECVNLREVKSLRK 56
E+ + +E+G G+FG V+ ++K + VAIK + + E L E +++
Sbjct: 15 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 74
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYM-ECNLYQLMKDREKCFSE---------AEVRNWC 106
+ ++V+L V+ + + E M +L ++ + +++
Sbjct: 75 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 134
Query: 107 FQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----RPPFTEYVST 161
++ G+AY++ + HRDL N +V++D T+KI DFG+ R+I R +
Sbjct: 135 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 194
Query: 162 RWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITL 195
RW +PE L+ ++++ D+W+ G ++ E+ TL
Sbjct: 195 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATL 226
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISK-----QSGEVVAIKKMKKKYYSWEECVNLREVKSLRK 56
E+ + +E+G G+FG V+ ++K + VAIK + + E L E +++
Sbjct: 19 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 78
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYM-----ECNLYQLMKDREKCF-----SEAEVRNWC 106
+ ++V+L V+ + + E M + L L + E S +++
Sbjct: 79 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 138
Query: 107 FQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----RPPFTEYVST 161
++ G+AY++ + HRDL N +V++D T+KI DFG+ R+I R +
Sbjct: 139 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 198
Query: 162 RWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITL 195
RW +PE L+ ++++ D+W+ G ++ E+ TL
Sbjct: 199 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATL 230
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISK-----QSGEVVAIKKMKKKYYSWEECVNLREVKSLRK 56
E+ + +E+G G+FG V+ ++K + VAIK + + E L E +++
Sbjct: 16 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 75
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYM-----ECNLYQLMKDREKCF-----SEAEVRNWC 106
+ ++V+L V+ + + E M + L L + E S +++
Sbjct: 76 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 135
Query: 107 FQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----RPPFTEYVST 161
++ G+AY++ + HRDL N +V++D T+KI DFG+ R+I R +
Sbjct: 136 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 195
Query: 162 RWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITL 195
RW +PE L+ ++++ D+W+ G ++ E+ TL
Sbjct: 196 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATL 227
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISK-----QSGEVVAIKKMKKKYYSWEECVNLREVKSLRK 56
E+ + +E+G G+FG V+ ++K + VAIK + + E L E +++
Sbjct: 18 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 77
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYM-----ECNLYQLMKDREKCF-----SEAEVRNWC 106
+ ++V+L V+ + + E M + L L + E S +++
Sbjct: 78 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 137
Query: 107 FQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----RPPFTEYVST 161
++ G+AY++ + HRDL N +V++D T+KI DFG+ R+I R +
Sbjct: 138 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 162 RWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITL 195
RW +PE L+ ++++ D+W+ G ++ E+ TL
Sbjct: 198 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATL 229
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISK-----QSGEVVAIKKMKKKYYSWEECVNLREVKSLRK 56
E+ + +E+G G+FG V+ ++K + VAIK + + E L E +++
Sbjct: 12 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 71
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYM-----ECNLYQLMKDREKCF-----SEAEVRNWC 106
+ ++V+L V+ + + E M + L L + E S +++
Sbjct: 72 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 131
Query: 107 FQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----RPPFTEYVST 161
++ G+AY++ + HRDL N +V++D T+KI DFG+ R+I R +
Sbjct: 132 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 191
Query: 162 RWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITL 195
RW +PE L+ ++++ D+W+ G ++ E+ TL
Sbjct: 192 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATL 223
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISK-----QSGEVVAIKKMKKKYYSWEECVNLREVKSLRK 56
E+ + +E+G G+FG V+ ++K + VAIK + + E L E +++
Sbjct: 18 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 77
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYM-----ECNLYQLMKDREKCF-----SEAEVRNWC 106
+ ++V+L V+ + + E M + L L + E S +++
Sbjct: 78 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 137
Query: 107 FQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----RPPFTEYVST 161
++ G+AY++ + HRDL N +V++D T+KI DFG+ R+I R +
Sbjct: 138 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 162 RWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITL 195
RW +PE L+ ++++ D+W+ G ++ E+ TL
Sbjct: 198 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATL 229
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISK-----QSGEVVAIKKMKKKYYSWEECVNLREVKSLRK 56
E+ + +E+G G+FG V+ ++K + VAIK + + E L E +++
Sbjct: 47 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 106
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYM-----ECNLYQLMKDREKCF-----SEAEVRNWC 106
+ ++V+L V+ + + E M + L L + E S +++
Sbjct: 107 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 166
Query: 107 FQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----RPPFTEYVST 161
++ G+AY++ + HRDL N +V++D T+KI DFG+ R+I R +
Sbjct: 167 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 226
Query: 162 RWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITL 195
RW +PE L+ ++++ D+W+ G ++ E+ TL
Sbjct: 227 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATL 258
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISK-----QSGEVVAIKKMKKKYYSWEECVNLREVKSLRK 56
E+ + +E+G G+FG V+ ++K + VAIK + + E L E +++
Sbjct: 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYM-----ECNLYQLMKDREKCF-----SEAEVRNWC 106
+ ++V+L V+ + + E M + L L + E S +++
Sbjct: 85 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 144
Query: 107 FQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----RPPFTEYVST 161
++ G+AY++ + HRDL N +V++D T+KI DFG+ R+I R +
Sbjct: 145 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 204
Query: 162 RWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITL 195
RW +PE L+ ++++ D+W+ G ++ E+ TL
Sbjct: 205 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATL 236
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 153/366 (41%), Gaps = 95/366 (25%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK-KYYSWEECVNLREVKSLRKMSHPN 61
RY +I+++G G F +VW + Q + VA+K +K ++Y+ +R +KS+R S PN
Sbjct: 22 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRN-SDPN 80
Query: 62 ------IVKLKEVIRENDI----LYFVFEYMECNLYQ-LMKDREKCFSEAEVRNWCFQVF 110
+V+L + + + + + VFE + +L + ++K + V+ QV
Sbjct: 81 DPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVL 140
Query: 111 QGLAYMHQRG-YFHRDLKPENLLVS----------------------------------- 134
QGL Y+H + H D+KPEN+L+S
Sbjct: 141 QGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPAT 200
Query: 135 ---------------KDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSK 179
K +KIAD G A ++ FTE + TR YR+ EVL+ S Y++
Sbjct: 201 AGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSLEVLIGSG-YNTP 257
Query: 180 VDMWAMGAIMAELITLRPLFPG------TSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
D+W+ + EL T LF T + D I I ++G + L++A
Sbjct: 258 ADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRK-----LIVAGKY 312
Query: 234 NYKFPQLVG--VPLSVLMP-------------SANKDA--VSLIASLCSWDPSKRPTAAE 276
+ +F G ++ L P S + A + + P KR TAAE
Sbjct: 313 SKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAE 372
Query: 277 ALQHPF 282
L+HP+
Sbjct: 373 CLRHPW 378
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWE-----ECVNLREVKSLRK 56
E +++IK +G G FG V K + + A+K + K WE E RE + +
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNK----WEMLKRAETACFREERDVLV 145
Query: 57 MSHPN-IVKLKEVIRENDILYFVFEY-MECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
I L ++ + LY V +Y + +L L+ E E R + ++ +
Sbjct: 146 NGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAID 205
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVS--TRWYRAPEVL- 170
+HQ Y HRD+KP+N+L+ + I++ADFG ++N V+ T Y +PE+L
Sbjct: 206 SIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQ 265
Query: 171 -LQSYL--YSSKVDMWAMGAIMAELI 193
++ + Y + D W++G M E++
Sbjct: 266 AMEDGMGKYGPECDWWSLGVCMYEML 291
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWE-----ECVNLREVKSLRK 56
E +++IK +G G FG V K + + A+K + K WE E RE + +
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNK----WEMLKRAETACFREERDVLV 129
Query: 57 MSHPN-IVKLKEVIRENDILYFVFEY-MECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
I L ++ + LY V +Y + +L L+ E E R + ++ +
Sbjct: 130 NGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAID 189
Query: 115 YMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVS--TRWYRAPEVL- 170
+HQ Y HRD+KP+N+L+ + I++ADFG ++N V+ T Y +PE+L
Sbjct: 190 SIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQ 249
Query: 171 -LQSYL--YSSKVDMWAMGAIMAELI 193
++ + Y + D W++G M E++
Sbjct: 250 AMEDGMGKYGPECDWWSLGVCMYEML 275
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 104/226 (46%), Gaps = 20/226 (8%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWE-----ECVNLREVKS-LR 55
+ ++++K +G G F V KQ+G+V A+K M K W+ E RE + L
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNK----WDMLKRGEVSCFREERDVLV 116
Query: 56 KMSHPNIVKLKEVIRENDILYFVFEY-MECNLYQLMKDREKCFSEAEVRNWCFQVFQGLA 114
I +L ++ + LY V EY + +L L+ + R + ++ +
Sbjct: 117 NGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAID 176
Query: 115 YMHQRGYFHRDLKPENLLVSK-DTIKIADFGLAREINSRPPFTEYVS--TRWYRAPEVL- 170
+H+ GY HRD+KP+N+L+ + I++ADFG ++ + V+ T Y +PE+L
Sbjct: 177 SVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQ 236
Query: 171 -----LQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKI 211
+ Y + D WA+G E+ + F S A+ KI
Sbjct: 237 AVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKI 282
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 131/292 (44%), Gaps = 60/292 (20%)
Query: 8 KEVGDGTFGSVWRAISKQSGE-----VVAIKKMKKKYYSWEECVNLREVKSLRKMS-HPN 61
K +G G FG V A + G+ VA+K +K ++ E+ + E+K + + H N
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 103
Query: 62 IVKLKE---------VIRE----NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQ 108
IV L VI E D+L F+ E +L K+ + ++ ++ Q
Sbjct: 104 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADL---DKEDGRPLELRDLLHFSSQ 160
Query: 109 VFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVSTRW---Y 164
V QG+A++ + HRD+ N+L++ + KI DFGLAR+I + + + R +
Sbjct: 161 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW 220
Query: 165 RAPEVLLQSYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDS 222
APE + +Y+ + D+W+ G ++ E+ + L P +PG
Sbjct: 221 MAPESIFDC-VYTVQSDVWSYGILLWEIFSLGLNP-YPGI-------------------- 258
Query: 223 WADGLLLARAINYKFPQLVGVPLSVLMPS-ANKDAVSLIASLCSWDPSKRPT 273
+N KF +LV + P+ A K+ S++ + + +P+ RPT
Sbjct: 259 ---------LVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPT 301
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 38/183 (20%)
Query: 105 WCFQVFQGLAYMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTEYVSTRW 163
+ FQV +G+ ++ R HRDL N+L+S K+ +KI DFGLAR+I P + R
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 164 ---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPL-FPGTSEADEIYKICSVIGTPT 219
+ APE + +Y+ + D+W+ G ++ E+ +L +PG +E C + T
Sbjct: 256 PLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRRLKEGT 311
Query: 220 QDSWADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSW--DPSKRPTAAEA 277
+ RA +Y P++ L W +PS+RPT +E
Sbjct: 312 R---------MRAPDYTTPEMYQTMLDC------------------WHGEPSQRPTFSEL 344
Query: 278 LQH 280
++H
Sbjct: 345 VEH 347
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 15/203 (7%)
Query: 4 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKM-KKKYYSW----EECVNLREVKSLRKMS 58
Y+L +G G FG+V+ VAIK + + + W + EV L K+
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 59 ----HPNIVKLKEVIRENDILYFVFE--YMECNLYQLMKDREKCFSEAEVRNWCFQVFQG 112
HP +++L + + V E +L+ + ++ E R + QV
Sbjct: 93 AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP-LGEGPSRCFFGQVVAA 151
Query: 113 LAYMHQRGYFHRDLKPENLLVS--KDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVL 170
+ + H RG HRD+K EN+L+ + K+ DFG ++ P+T++ TR Y PE +
Sbjct: 152 IQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE-PYTDFDGTRVYSPPEWI 210
Query: 171 LQSYLYSSKVDMWAMGAIMAELI 193
+ ++ +W++G ++ +++
Sbjct: 211 SRHQYHALPATVWSLGILLYDMV 233
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 153/366 (41%), Gaps = 95/366 (25%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK-KYYSWEECVNLREVKSLRKMSHPN 61
RY +I+++G G F +VW + Q + VA+K +K ++Y+ +R +KS+R S PN
Sbjct: 38 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRN-SDPN 96
Query: 62 ------IVKLKEVIRENDI----LYFVFEYMECNLYQ-LMKDREKCFSEAEVRNWCFQVF 110
+V+L + + + + + VFE + +L + ++K + V+ QV
Sbjct: 97 DPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVL 156
Query: 111 QGLAYMHQRG-YFHRDLKPENLLVS----------------------------------- 134
QGL Y+H + H D+KPEN+L+S
Sbjct: 157 QGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPAT 216
Query: 135 ---------------KDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSK 179
K +KIAD G A ++ FTE + TR YR+ EVL+ S Y++
Sbjct: 217 AGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSLEVLIGSG-YNTP 273
Query: 180 VDMWAMGAIMAELITLRPLFPG------TSEADEIYKICSVIGTPTQDSWADGLLLARAI 233
D+W+ + EL T LF T + D I I ++G + L++A
Sbjct: 274 ADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRK-----LIVAGKY 328
Query: 234 NYKFPQLVG--VPLSVLMP-------------SANKDA--VSLIASLCSWDPSKRPTAAE 276
+ +F G ++ L P S + A + + P KR TAAE
Sbjct: 329 SKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAE 388
Query: 277 ALQHPF 282
L+HP+
Sbjct: 389 CLRHPW 394
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 38/183 (20%)
Query: 105 WCFQVFQGLAYMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTEYVSTRW 163
+ FQV +G+ ++ R HRDL N+L+S K+ +KI DFGLAR+I P + R
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 164 ---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPL-FPGTSEADEIYKICSVIGTPT 219
+ APE + +Y+ + D+W+ G ++ E+ +L +PG +E C + T
Sbjct: 258 PLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRRLKEGT 313
Query: 220 QDSWADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSW--DPSKRPTAAEA 277
+ RA +Y P++ L W +PS+RPT +E
Sbjct: 314 R---------MRAPDYTTPEMYQTMLDC------------------WHGEPSQRPTFSEL 346
Query: 278 LQH 280
++H
Sbjct: 347 VEH 349
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 103/214 (48%), Gaps = 22/214 (10%)
Query: 2 ERYKLIKEVGDGTFGSVWRAISK-----QSGEVVAIKKMKKKYYSWEECVNLREVKSLRK 56
E+ + +E+G G+FG V+ ++K + VAIK + + E L E +++
Sbjct: 12 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 71
Query: 57 MSHPNIVKLKEVIRENDILYFVFEYM-----ECNLYQLMKDREKCF-----SEAEVRNWC 106
+ ++V+L V+ + + E M + L L + E S +++
Sbjct: 72 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 131
Query: 107 FQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS----RPPFTEYVST 161
++ G+AY++ + HRDL N V++D T+KI DFG+ R+I R +
Sbjct: 132 GEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 191
Query: 162 RWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITL 195
RW +PE L+ ++++ D+W+ G ++ E+ TL
Sbjct: 192 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATL 223
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 131/292 (44%), Gaps = 60/292 (20%)
Query: 8 KEVGDGTFGSVWRAISKQSGE-----VVAIKKMKKKYYSWEECVNLREVKSLRKMS-HPN 61
K +G G FG V A + G+ VA+K +K ++ E+ + E+K + + H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 62 IVKLKE---------VIRE----NDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQ 108
IV L VI E D+L F+ E +L K+ + ++ ++ Q
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADL---DKEDGRPLELRDLLHFSSQ 168
Query: 109 VFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVSTRW---Y 164
V QG+A++ + HRD+ N+L++ + KI DFGLAR+I + + + R +
Sbjct: 169 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW 228
Query: 165 RAPEVLLQSYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQDS 222
APE + +Y+ + D+W+ G ++ E+ + L P +PG
Sbjct: 229 MAPESIFDC-VYTVQSDVWSYGILLWEIFSLGLNP-YPGI-------------------- 266
Query: 223 WADGLLLARAINYKFPQLVGVPLSVLMPS-ANKDAVSLIASLCSWDPSKRPT 273
+N KF +LV + P+ A K+ S++ + + +P+ RPT
Sbjct: 267 ---------LVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPT 309
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 38/183 (20%)
Query: 105 WCFQVFQGLAYMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTEYVSTRW 163
+ FQV +G+ ++ R HRDL N+L+S K+ +KI DFGLAR+I P + R
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 164 ---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPL-FPGTSEADEIYKICSVIGTPT 219
+ APE + +Y+ + D+W+ G ++ E+ +L +PG +E C + T
Sbjct: 263 PLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRRLKEGT 318
Query: 220 QDSWADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSW--DPSKRPTAAEA 277
+ RA +Y P++ L W +PS+RPT +E
Sbjct: 319 R---------MRAPDYTTPEMYQTMLDC------------------WHGEPSQRPTFSEL 351
Query: 278 LQH 280
++H
Sbjct: 352 VEH 354
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 129/294 (43%), Gaps = 60/294 (20%)
Query: 8 KEVGDGTFGSVWRAISKQSGE-----VVAIKKMKKKYYSWEECVNLREVKSLRKMS-HPN 61
K +G G FG V A + G+ VA+K +K ++ E+ + E+K + + H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 62 IVKLKEVIRENDILYFVFEYMEC--NLYQLMKDREKCF----------SEAEVRN---WC 106
IV L + + EY C +L ++ + + S A R+ +
Sbjct: 112 IVNLLGACTHGGPVLVITEYC-CYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFS 170
Query: 107 FQVFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVSTRW-- 163
QV QG+A++ + HRD+ N+L++ + KI DFGLAR+I + + + R
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 164 -YRAPEVLLQSYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPTQ 220
+ APE + +Y+ + D+W+ G ++ E+ + L P +PG
Sbjct: 231 KWMAPESIFDC-VYTVQSDVWSYGILLWEIFSLGLNP-YPGI------------------ 270
Query: 221 DSWADGLLLARAINYKFPQLVGVPLSVLMPS-ANKDAVSLIASLCSWDPSKRPT 273
+N KF +LV + P+ A K+ S++ + + +P+ RPT
Sbjct: 271 -----------LVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPT 313
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 38/183 (20%)
Query: 105 WCFQVFQGLAYMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREINSRPPFTEYVSTRW 163
+ FQV +G+ ++ R HRDL N+L+S K+ +KI DFGLAR+I P + R
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 164 ---YRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPL-FPGTSEADEIYKICSVIGTPT 219
+ APE + +Y+ + D+W+ G ++ E+ +L +PG +E C + T
Sbjct: 265 PLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRRLKEGT 320
Query: 220 QDSWADGLLLARAINYKFPQLVGVPLSVLMPSANKDAVSLIASLCSW--DPSKRPTAAEA 277
+ RA +Y P++ L W +PS+RPT +E
Sbjct: 321 R---------MRAPDYTTPEMYQTMLDC------------------WHGEPSQRPTFSEL 353
Query: 278 LQH 280
++H
Sbjct: 354 VEH 356
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 131/295 (44%), Gaps = 60/295 (20%)
Query: 8 KEVGDGTFGSVWRAISKQSGE-----VVAIKKMKKKYYSWEECVNLREVKSLRKMS-HPN 61
K +G G FG V A + G+ VA+K +K ++ E+ + E+K + + H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 62 IVKLKE---------VIRE----NDILYFVFEYMECNL---YQLMKDREKCFSEAEVRNW 105
IV L VI E D+L F+ L Y + E+ S ++ ++
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHF 171
Query: 106 CFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSRPPFTEYVSTRW- 163
QV QG+A++ + HRD+ N+L++ + KI DFGLAR+I + + + R
Sbjct: 172 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 231
Query: 164 --YRAPEVLLQSYLYSSKVDMWAMGAIMAELIT--LRPLFPGTSEADEIYKICSVIGTPT 219
+ APE + +Y+ + D+W+ G ++ E+ + L P +PG
Sbjct: 232 VKWMAPESIFDC-VYTVQSDVWSYGILLWEIFSLGLNP-YPGI----------------- 272
Query: 220 QDSWADGLLLARAINYKFPQLVGVPLSVLMPS-ANKDAVSLIASLCSWDPSKRPT 273
+N KF +LV + P+ A K+ S++ + + +P+ RPT
Sbjct: 273 ------------LVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPT 315
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 121/281 (43%), Gaps = 69/281 (24%)
Query: 3 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK-KYYSWEECVNLREVKSLRKM--SH 59
RY +I+++G G F +VW Q VA+K +K ++Y+ ++ +K +R+ S
Sbjct: 32 RYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESDPSD 91
Query: 60 PNIVKLKEVIRENDI-------LYFVFEYMECNLYQ-LMKDREKCFSEAEVRNWCFQVFQ 111
PN + ++I + I + VFE + +L + ++K + V++ QV Q
Sbjct: 92 PNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQ 151
Query: 112 GLAYMHQR-GYFHRDLKPENLLVSKDT--------------------------------- 137
GL Y+H + H D+KPEN+L+ D
Sbjct: 152 GLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVSTAPAAD 211
Query: 138 ---------------IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDM 182
+KIAD G A ++ FTE + TR YR+ EVL+ + YS+ D+
Sbjct: 212 LLVNPLDPRNADKIRVKIADLGNACWVHKH--FTEDIQTRQYRSIEVLIGAG-YSTPADI 268
Query: 183 WAMGAIMAELITLRPLF-PGTSE-----ADEIYKICSVIGT 217
W+ + EL T LF P + E D I I ++G+
Sbjct: 269 WSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGS 309
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.136 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,666,234
Number of Sequences: 62578
Number of extensions: 376310
Number of successful extensions: 5201
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 862
Number of HSP's gapped (non-prelim): 1261
length of query: 337
length of database: 14,973,337
effective HSP length: 99
effective length of query: 238
effective length of database: 8,778,115
effective search space: 2089191370
effective search space used: 2089191370
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 52 (24.6 bits)