BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>038837
MAAAAHLTLLLVILFWSFTLTSQNQQHSQQHLIAELQDAKLKIAGLETMLEESIRKVNGK
SNYIEERDKLVDDMTNKIHHLQSLLSKIKDDSSRAEERLNALEEEIRLLWAASRKNNFDI
HNLESKALDAEDRLEEVSLQVEKMSEIVTEQWIQIQHLEQALHMAELRAANVQRQLMYAR
CTFLKFVKDFSEKHLPKLTGMLVPYLPGKGSILISFMSQVQHQFKRFFLAFKKFHHELQG
FIKQEMVKNKLTAALANEELVFFVASALITFPILAAWVLLSSQFSKL

High Scoring Gene Products

Symbol, full name Information P value
AT1G28410 protein from Arabidopsis thaliana 1.5e-51
AT4G31340 protein from Arabidopsis thaliana 5.9e-14
AT2G24420 protein from Arabidopsis thaliana 2.6e-13

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  038837
        (287 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2032520 - symbol:AT1G28410 "AT1G28410" species...   535  1.5e-51   1
TAIR|locus:2128166 - symbol:AT4G31340 "AT4G31340" species...   126  5.9e-14   2
TAIR|locus:2061067 - symbol:AT2G24420 species:3702 "Arabi...   125  2.6e-13   2


>TAIR|locus:2032520 [details] [associations]
            symbol:AT1G28410 "AT1G28410" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002684 IPI:IPI00536082 RefSeq:NP_174163.2
            UniGene:At.40894 PRIDE:F4HY55 EnsemblPlants:AT1G28410.1
            GeneID:839739 KEGG:ath:AT1G28410 OMA:VVTEQWI Uniprot:F4HY55
        Length = 277

 Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
 Identities = 118/280 (42%), Positives = 172/280 (61%)

Query:     6 HLTLLLVILFWSFTLTSQNQQH--SQQHLIAELQDAKLKIAGLETMLEESIRKVNGKSNY 63
             HL  L  I+   F  +SQ QQ   S Q+LI +L  AKL+I+ LE +LE +I+K++GK+ Y
Sbjct:     4 HLAALFFIISPLFVFSSQVQQQIGSNQNLINDLDSAKLRISQLEAVLEATIQKLDGKTLY 63

Query:    64 IEERDKLVDDMTNKIHHLQSLLSKIKDDSSXXXXXXXXXXXXXXXXWAASRKNNFDIHNL 123
             ++ER+KL+     +I  LQS     K                    WAA R  NF++H L
Sbjct:    64 LKEREKLIQVAETQILDLQSASYIDKSGLPLVQKRISELEEEVKLLWAALRTTNFELHVL 123

Query:   124 ESKALDAEDRLEEVSLQVEKMSEIVTEQWIQIQHLEQALHMAELRAANVQRQLMYARCTF 183
             E KA +A+++L+  +L+VE+M+E+VTEQWIQ+QHLEQ      +R  N +R    +RC F
Sbjct:   124 EDKAREAKNKLKAKALEVEQMTEVVTEQWIQVQHLEQ------MREFNNRRHHTPSRCPF 177

Query:   184 LKFVKDFSEKHLPKLTGMLVPYLPGKGSILIS-FMSQVQHQFKRFFLAFKKFHHELQGFI 242
             +K + D   KHLPK+      +  GK  + +  ++++   Q K  + A  K+HH+LQGFI
Sbjct:   178 VKLMSDIQRKHLPKVDEAFDIHWKGKKVLSVQPYLTKALSQLKSLWAAVTKYHHQLQGFI 237

Query:   243 KQEMVKNKLTAALANEELVFFVASALITFPILAAWVLLSS 282
             + EM + ++TAALAN E+VFF+ASALITFP+  AW+LLSS
Sbjct:   238 EHEMERTEITAALANREVVFFMASALITFPVFGAWMLLSS 277


>TAIR|locus:2128166 [details] [associations]
            symbol:AT4G31340 "AT4G31340" species:3702 "Arabidopsis
            thaliana" [GO:0005783 "endoplasmic reticulum" evidence=IDA]
            [GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0005794 "Golgi
            apparatus" evidence=IDA] [GO:0006007 "glucose catabolic process"
            evidence=RCA] [GO:0042732 "D-xylose metabolic process"
            evidence=RCA] GO:GO:0005783 GO:GO:0005794 GO:GO:0005774
            EMBL:CP002687 EMBL:BT002358 EMBL:AK317035 IPI:IPI00516401
            RefSeq:NP_567873.1 UniGene:At.23680 UniGene:At.34197
            ProteinModelPortal:Q8GUN1 SMR:Q8GUN1 PRIDE:Q8GUN1
            EnsemblPlants:AT4G31340.1 GeneID:829261 KEGG:ath:AT4G31340
            TAIR:At4g31340 HOGENOM:HOG000005810 InParanoid:Q8GUN1 OMA:WYLASAL
            PhylomeDB:Q8GUN1 ProtClustDB:CLSN2688385 Genevestigator:Q8GUN1
            Uniprot:Q8GUN1
        Length = 437

 Score = 126 (49.4 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
 Identities = 45/181 (24%), Positives = 84/181 (46%)

Query:     1 MAAAAHLTLLLV-ILFWSFTLTSQNQQHSQQHLIAE------LQDAKLKIAGLETMLEES 53
             MAAA  + LLL+ +LF +      ++    +   ++      L     KI  LE+ ++E 
Sbjct:     1 MAAAKLVALLLLALLFTTSVFADADEPEVSEAAGSDGSSKIHLDQLNAKIRALESQIDEK 60

Query:    54 IRKVNGKSNYIEERDKLVDDMTNKIHHLQSLLSKIKDDSSXXXXXXXXXXXXXXXXWAAS 113
              R+V GK   + E++KL+ +  +KI  LQ+ +S ++   S                    
Sbjct:    61 TREVQGKDEVVAEKEKLLKEREDKIASLQTEVSSLQKKGSSDSAKQLGKAQARADELEKQ 120

Query:   114 ---RKN-----NFDIHNLESKALDAEDRLEEVSLQVEKMSEIVTEQWIQIQHLEQALHMA 165
                 KN     N +  + E++  +AE +L E++  ++K+ +   EQ  +I  LE+A+ +A
Sbjct:   121 VEVLKNFLEQKNKEKDSTEARTNEAEKKLRELNSSLDKLQKTNEEQKNKIGKLERAIKIA 180

Query:   166 E 166
             E
Sbjct:   181 E 181

 Score = 122 (48.0 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
 Identities = 26/97 (26%), Positives = 54/97 (55%)

Query:   188 KDFSEKHLPKLTGMLVPYLPGKGSILISFMSQVQHQFKRFFLAFKKFHHELQGFIKQEMV 247
             K FS+ ++ ++     P++      +  + ++V   +  F  +   +H+++Q  +++++ 
Sbjct:   315 KKFSKPYVDQVATTTKPHVDKMKVAMKPYTTKVIIVYTEFLESATTYHNQVQAHVERKLK 374

Query:   248 KNKLTAALANEELVFFVASALITFPILAAWVLLSSQF 284
              ++LT   A  E V+F ASAL+ FPI  A+ +LSS F
Sbjct:   375 SHELTEPFATNEFVWFAASALLVFPIFVAYRVLSSLF 411

 Score = 51 (23.0 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
 Identities = 14/63 (22%), Positives = 34/63 (53%)

Query:   113 SRKNNFDIHNLESKALDAEDRLEEVSLQVEKMSEIVTEQWIQIQHLEQALHMAELRAANV 172
             S K + D  N + +AL  E +++E + +V+   E+V E+   ++  E  +   +   +++
Sbjct:    38 SSKIHLDQLNAKIRAL--ESQIDEKTREVQGKDEVVAEKEKLLKEREDKIASLQTEVSSL 95

Query:   173 QRQ 175
             Q++
Sbjct:    96 QKK 98

 Score = 38 (18.4 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
 Identities = 10/45 (22%), Positives = 24/45 (53%)

Query:    47 ETMLEESIRKVNGKSNYIEERDKLVDDMTNKIHHLQSLLSKIKDD 91
             E    E+ +K+   ++ +++  K  ++  NKI  L+  + KI ++
Sbjct:   139 EARTNEAEKKLRELNSSLDKLQKTNEEQKNKIGKLERAI-KIAEE 182


>TAIR|locus:2061067 [details] [associations]
            symbol:AT2G24420 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0005783
            "endoplasmic reticulum" evidence=IDA] [GO:0005774 "vacuolar
            membrane" evidence=IDA] GO:GO:0005783 GO:GO:0005774 EMBL:CP002685
            GenomeReviews:CT485783_GR InterPro:IPR013326 SUPFAM:SSF47162
            EMBL:AC006403 HSSP:P28033 UniGene:At.23666 HOGENOM:HOG000005810
            ProtClustDB:CLSN2688385 UniGene:At.39159 EMBL:AF419562
            EMBL:BT010170 EMBL:AK316670 IPI:IPI00543802 PIR:D84636
            RefSeq:NP_565569.1 RefSeq:NP_850053.1 UniGene:At.67138
            ProteinModelPortal:Q9ZQ26 SMR:Q9ZQ26 PRIDE:Q9ZQ26
            EnsemblPlants:AT2G24420.1 EnsemblPlants:AT2G24420.2 GeneID:816978
            KEGG:ath:AT2G24420 TAIR:At2g24420 InParanoid:Q9ZQ26 OMA:KTHVEPH
            PhylomeDB:Q9ZQ26 ArrayExpress:Q9ZQ26 Genevestigator:Q9ZQ26
            Uniprot:Q9ZQ26
        Length = 440

 Score = 125 (49.1 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
 Identities = 24/97 (24%), Positives = 51/97 (52%)

Query:   188 KDFSEKHLPKLTGMLVPYLPGKGSILISFMSQVQHQFKRFFLAFKKFHHELQGFIKQEMV 247
             K FS+ ++ ++     P++    + +  + ++  H +K F  +   +HH+LQ  ++ ++ 
Sbjct:   318 KKFSKPYVDQVATATKPHVDKVRATMKPYTTKTVHYYKEFLESASTYHHQLQANVESKLK 377

Query:   248 KNKLTAALANEELVFFVASALITFPILAAWVLLSSQF 284
              ++L    A +E ++F ASAL+  PI   +  L S F
Sbjct:   378 SHELLEPFATKEFIWFAASALLALPIFIVYKFLCSLF 414

 Score = 117 (46.2 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
 Identities = 32/140 (22%), Positives = 69/140 (49%)

Query:    35 ELQDAKLKIAGLETMLEESIRKVNGKSNYIEERDKLVDDMTNKIHHLQSLLSKIK----D 90
             EL     KI  LE+ +++  +++ G+   + E++KL+ +  +K+  L++ +S ++     
Sbjct:    45 ELDQLNAKIRALESQIDDKTKELKGREELVTEKEKLLQERQDKVASLETEVSSLRKKGSS 104

Query:    91 DSSXXXXXXXXXXXXXXXXWAASRK----NNFDIHNLESKALDAEDRLEEVSLQVEKMSE 146
             DS                     +K     N +   +E++  + E +L E++ +VEK+ +
Sbjct:   105 DSVELLSKAQARATELEKQVEVLKKFLEQKNKEKELIEAQTSETEKKLNELNSRVEKLHK 164

Query:   147 IVTEQWIQIQHLEQALHMAE 166
                EQ  +I+ LE+AL ++E
Sbjct:   165 TNEEQKNKIRKLERALKISE 184

 Score = 46 (21.3 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
 Identities = 9/59 (15%), Positives = 32/59 (54%)

Query:   117 NFDIHNLESKALDAEDRLEEVSLQVEKMSEIVTEQWIQIQHLEQALHMAELRAANVQRQ 175
             + ++  L +K    E ++++ + +++   E+VTE+   +Q  +  +   E   ++++++
Sbjct:    43 DIELDQLNAKIRALESQIDDKTKELKGREELVTEKEKLLQERQDKVASLETEVSSLRKK 101


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.132   0.371    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      287       271   0.00098  114 3  11 22  0.43    33
                                                     32  0.40    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  186 KB (2106 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  28.19u 0.11s 28.30t   Elapsed:  00:00:02
  Total cpu time:  28.19u 0.11s 28.30t   Elapsed:  00:00:02
  Start:  Tue May 21 00:07:27 2013   End:  Tue May 21 00:07:29 2013

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