Query 038845
Match_columns 177
No_of_seqs 126 out of 855
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 05:52:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038845.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038845hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jer_A Cucumber stellacyanin; 100.0 3E-41 1E-45 264.3 5.2 108 35-145 2-115 (138)
2 1ws8_A Mavicyanin; oxidized fo 100.0 2.8E-40 9.6E-45 249.3 6.6 101 40-141 4-107 (109)
3 1x9u_A Umecyanin; cupredoxin, 100.0 1.9E-39 6.4E-44 247.3 6.8 102 39-141 2-108 (116)
4 2cbp_A Cucumber basic protein; 100.0 5.6E-38 1.9E-42 231.7 7.6 94 40-137 2-96 (96)
5 1f56_A Plantacyanin; cupredoxi 100.0 8E-34 2.7E-38 207.7 8.7 89 40-137 2-91 (91)
6 1qhq_A Protein (auracyanin); e 99.2 3.3E-11 1.1E-15 91.7 8.5 94 38-137 16-139 (140)
7 1bxv_A Plastocyanin; copper pr 99.2 4.3E-11 1.5E-15 83.8 7.4 87 39-137 3-91 (91)
8 2cal_A Rusticyanin; iron respi 99.0 3.5E-10 1.2E-14 88.6 6.6 76 61-137 62-154 (154)
9 1pmy_A Pseudoazurin; electron 99.0 7.3E-10 2.5E-14 84.0 6.6 83 44-139 11-95 (123)
10 1paz_A Pseudoazurin precursor; 99.0 1E-09 3.6E-14 83.1 6.7 87 40-139 4-95 (123)
11 1iuz_A Plastocyanin; electron 98.9 2.2E-09 7.6E-14 76.8 6.8 92 39-137 2-98 (98)
12 2gim_A Plastocyanin; beta shee 98.9 3.2E-09 1.1E-13 76.3 5.8 90 39-137 4-105 (106)
13 1plc_A Plastocyanin; electron 98.8 6.8E-09 2.3E-13 74.0 7.1 91 40-137 2-99 (99)
14 3tu6_A Pseudoazurin (blue copp 98.8 6.1E-09 2.1E-13 79.5 6.0 85 43-140 11-98 (127)
15 2aan_A Auracyanin A; cupredoxi 98.8 3E-08 1E-12 75.2 9.8 94 36-137 16-139 (139)
16 3erx_A Pseudoazurin; copper pr 98.8 4.2E-09 1.5E-13 80.0 4.9 75 60-141 21-97 (123)
17 3ef4_A Pseudoazurin, blue copp 98.8 1E-08 3.5E-13 78.2 6.7 83 44-138 10-95 (124)
18 2plt_A Plastocyanin; electron 98.8 8.6E-09 2.9E-13 73.1 5.9 92 39-137 2-98 (98)
19 1kdj_A Plastocyanin; electron 98.8 1.9E-08 6.4E-13 72.0 7.0 91 40-137 2-102 (102)
20 1byp_A Protein (plastocyanin); 98.7 1.7E-08 5.7E-13 71.8 6.0 91 40-137 2-99 (99)
21 1b3i_A PETE protein, protein ( 98.7 3.4E-08 1.2E-12 70.0 7.1 90 39-137 3-97 (97)
22 1pcs_A Plastocyanin; electron 98.6 3.8E-08 1.3E-12 69.8 5.5 92 39-137 3-98 (98)
23 2ux6_A Pseudoazurin; type-1 co 98.2 1.3E-06 4.5E-11 65.8 5.1 71 60-139 21-93 (122)
24 3c75_A Amicyanin; copper prote 98.1 6.1E-06 2.1E-10 62.6 6.7 72 60-137 60-132 (132)
25 4hci_A Cupredoxin 1; structura 98.1 5.4E-06 1.8E-10 59.3 5.4 68 60-137 28-100 (100)
26 3cvb_A Plastocyanin; cupredoxi 98.1 1.6E-05 5.5E-10 56.4 7.9 90 39-137 3-104 (105)
27 3ay2_A Lipid modified azurin p 97.9 4.5E-05 1.5E-09 60.7 8.0 91 39-137 43-166 (167)
28 1cuo_A Protein (azurin ISO-2); 97.8 0.00012 4.2E-09 55.6 9.9 90 40-137 4-128 (129)
29 1id2_A Amicyanin; beta barrel, 97.7 7.2E-05 2.5E-09 54.2 6.4 72 60-137 34-106 (106)
30 2ov0_A Amicyanin; beta-sandwic 97.7 8.9E-05 3E-09 53.4 6.5 68 60-137 33-105 (105)
31 2iaa_C Azurin; quinoprotein, t 97.6 0.00068 2.3E-08 51.4 10.4 90 40-137 3-127 (128)
32 2ccw_A Azurin II, AZN-2; elect 97.5 0.00088 3E-08 50.8 10.0 88 40-137 4-128 (129)
33 1nwp_A Azurin; electron transp 97.5 0.00049 1.7E-08 52.2 8.1 90 40-137 4-128 (128)
34 1iko_P Ephrin-B2; greek KEY, g 97.3 0.00013 4.3E-09 59.0 3.7 78 64-141 26-143 (178)
35 2x11_B Ephrin-A5; receptor-sig 97.0 0.0011 3.7E-08 53.5 5.7 76 62-140 52-164 (177)
36 3czu_B Ephrin-A1; ATP-binding, 96.8 0.0038 1.3E-07 50.5 7.3 76 61-139 49-161 (182)
37 1iby_A Nitrosocyanin; RED copp 96.4 0.01 3.4E-07 42.6 6.9 67 60-137 38-111 (112)
38 1shx_A Ephrin-A5; ephrin signa 96.4 0.0085 2.9E-07 46.4 6.8 75 62-139 23-134 (138)
39 3d12_B Ephrin-B3; beta propell 96.1 0.01 3.5E-07 46.1 6.1 75 63-137 23-140 (141)
40 2cua_A Protein (CUA); CUA cent 96.1 0.024 8.1E-07 43.0 7.9 67 60-137 60-134 (135)
41 2vsm_B Ephrin-B2; developmenta 95.7 0.013 4.3E-07 45.5 4.8 74 64-137 25-138 (140)
42 3fsa_A Azurin; copper, cupredo 95.3 0.23 7.9E-06 37.6 10.7 87 40-137 4-125 (125)
43 2wo3_B Ephrin-A2; transferase- 95.2 0.049 1.7E-06 43.0 6.7 35 62-96 32-77 (157)
44 3s8f_B Cytochrome C oxidase su 94.4 0.14 4.8E-06 40.4 7.5 68 60-137 93-167 (168)
45 2dv6_A Nitrite reductase; elec 93.1 0.13 4.4E-06 45.0 5.7 77 60-141 55-135 (447)
46 3hei_B Ephrin-A1; EPH receptor 91.9 0.27 9.4E-06 37.6 5.5 76 62-137 22-131 (132)
47 3sbq_A Nitrous-oxide reductase 91.1 0.56 1.9E-05 44.2 7.7 68 60-138 558-637 (638)
48 1fwx_A Nitrous oxide reductase 90.5 0.66 2.3E-05 43.3 7.6 66 61-138 514-592 (595)
49 3iuw_A Activating signal coint 70.3 1.9 6.7E-05 30.4 1.8 16 62-77 36-52 (83)
50 1fft_B Ubiquinol oxidase; elec 69.8 32 0.0011 29.4 9.7 66 61-137 152-225 (315)
51 1mzy_A Copper-containing nitri 69.3 11 0.00037 31.5 6.5 74 62-139 66-153 (333)
52 1oe1_A Dissimilatory copper-co 68.4 11 0.00037 31.4 6.4 75 61-139 66-153 (336)
53 2zoo_A Probable nitrite reduct 62.7 7.7 0.00026 33.6 4.5 76 61-140 61-148 (442)
54 2gsm_B Cytochrome C oxidase su 62.4 62 0.0021 26.7 9.8 30 108-138 214-246 (262)
55 1kbv_A ANIA, major outer membr 58.8 12 0.00041 31.4 4.8 76 61-140 71-158 (327)
56 1v54_B Cytochrome C oxidase po 58.5 68 0.0023 25.9 9.2 30 108-138 183-215 (227)
57 3hb3_B Cytochrome C oxidase su 50.6 1.1E+02 0.0039 25.8 9.8 30 108-138 232-264 (298)
58 1cyx_A CYOA; electron transpor 49.5 17 0.00057 29.5 4.0 65 62-137 43-115 (205)
59 2hzs_I RNA polymerase II media 48.8 0.2 7E-06 27.8 -5.1 19 61-79 4-22 (27)
60 2bw4_A Copper-containing nitri 47.1 27 0.00093 29.0 5.2 74 62-139 73-159 (340)
61 1oe1_A Dissimilatory copper-co 46.4 23 0.00078 29.4 4.6 33 108-140 286-320 (336)
62 3gdc_A Multicopper oxidase; be 45.6 32 0.0011 28.1 5.3 78 61-141 67-157 (288)
63 1yel_A AT1G16640; CESG, protei 44.3 12 0.00041 26.2 2.2 18 60-77 74-91 (104)
64 2z0t_A Putative uncharacterize 40.2 12 0.0004 27.4 1.6 11 62-72 32-42 (109)
65 4i1k_A B3 domain-containing tr 39.8 19 0.00067 27.1 2.9 25 60-84 113-137 (146)
66 4dny_A Metalloprotease STCE; m 39.4 7 0.00024 29.6 0.3 20 66-85 77-96 (126)
67 1mzy_A Copper-containing nitri 35.3 23 0.00077 29.5 2.8 32 108-139 286-319 (333)
68 1xne_A Hypothetical protein PF 34.8 10 0.00035 27.9 0.5 12 62-73 33-44 (113)
69 1aoz_A Ascorbate oxidase; oxid 31.6 89 0.0031 27.9 6.3 76 61-140 35-125 (552)
70 2q9o_A Laccase-1; multicopper 30.0 2.2E+02 0.0075 25.5 8.7 76 61-140 68-159 (559)
71 2zwn_A Two-domain type laccase 29.8 58 0.002 27.2 4.5 80 63-143 38-131 (339)
72 2b6b_D CD209 antigen; cryo EM 29.3 29 0.001 26.0 2.3 28 115-142 142-171 (175)
73 2k75_A Uncharacterized protein 28.8 18 0.00061 25.7 1.0 29 40-73 41-69 (106)
74 2nms_A CMRF35-like-molecule 1; 25.2 22 0.00076 24.9 0.9 16 127-142 100-115 (124)
75 3gdc_A Multicopper oxidase; be 25.0 28 0.00095 28.5 1.6 31 108-138 257-288 (288)
76 1sdd_A Coagulation factor V; c 24.7 11 0.00036 31.4 -1.0 31 108-138 269-300 (306)
77 3l6w_A Hemocyanin 1; cupredoxi 24.5 43 0.0015 30.5 2.9 73 63-137 414-491 (491)
78 2hd9_A UPF0310 protein PH1033; 24.3 14 0.00048 27.9 -0.3 29 47-76 19-47 (145)
79 4doo_A Chalcone-flavanone isom 24.2 59 0.002 25.5 3.4 28 58-85 134-161 (205)
80 2j5w_A Ceruloplasmin, ferroxid 23.8 80 0.0027 30.9 4.8 74 61-139 633-718 (1065)
81 1kbv_A ANIA, major outer membr 23.8 51 0.0018 27.4 3.1 33 108-140 275-309 (327)
82 1zpu_A Iron transport multicop 23.4 1.2E+02 0.0042 27.0 5.7 76 61-140 35-126 (534)
83 2y7l_A NT_ALS9-2, agglutinin-l 23.0 34 0.0012 29.5 1.8 36 60-95 41-83 (312)
84 3t6v_A Laccase; beta barrel, o 22.9 1.6E+02 0.0055 26.1 6.3 33 108-140 97-131 (495)
85 2qcp_X Cation efflux system pr 22.3 39 0.0013 22.9 1.7 17 60-76 50-66 (80)
86 3sqr_A Laccase; multicopper ox 21.8 1.5E+02 0.005 27.2 5.9 33 108-140 156-189 (580)
87 3pxl_A Laccase; 4-copper prote 21.7 1.8E+02 0.0061 25.9 6.4 33 108-140 96-130 (499)
88 2vb2_X Copper protein, cation 21.6 46 0.0016 23.0 1.9 20 57-76 55-74 (88)
89 2xr6_A CD209 antigen; sugar bi 21.3 30 0.001 25.5 1.0 28 115-142 137-166 (170)
90 2b1y_A Hypothetical protein AT 21.0 3.7 0.00013 30.1 -4.0 78 62-141 14-95 (104)
91 3rrq_A Protein PD-1, programme 20.8 37 0.0013 23.8 1.4 10 129-138 106-115 (129)
92 4he6_A Peptidase family U32; u 20.1 62 0.0021 21.8 2.4 17 61-77 27-43 (89)
No 1
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=3e-41 Score=264.28 Aligned_cols=108 Identities=30% Similarity=0.475 Sum_probs=96.5
Q ss_pred cccceEEEecCCCCCCCC---CCccccCCCCceEeCCEEEEEEcCCCceEEEE-cccccccCcCCCccceeccCCceEEE
Q 038845 35 SGTGTLHRVGGKLGWTPS---VNFTEWSSHESFYVNDWLIFNFDKNMYNVLEV-NKTSYESCNDKGFIKNITKGGRDVFQ 110 (177)
Q Consensus 35 ~A~~~~~~VGg~~GW~~~---~~Y~~Wa~~~~F~vGDtLvF~y~~~~H~V~~V-~~~~Y~~C~~~~~i~~~~~~G~~~v~ 110 (177)
+|+ +|+|||+.||+.+ .||++|+++++|++||+|+|+|++++|||+|| ++++|+.|+.++++..++ +|++.|+
T Consensus 2 ~a~--~~~VGg~~GW~~~~~~~~Y~~Wa~~~~F~vGD~LvF~y~~~~HsV~~V~~~~~y~~C~~s~p~~~~~-~G~~~v~ 78 (138)
T 1jer_A 2 QST--VHIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVNSDNDVE-RTSPVIE 78 (138)
T ss_dssp CCC--EEETTGGGCSSCCSSTTHHHHHHHTCCEETTCEEEECCCTTTCCCEEESCHHHHHHTCCTTSCCCCC-CCSCEEE
T ss_pred Cce--EEEECCcCcCcCCCCccchhhhhcCCcCcCCCEEEEeecCCCceEEEeCchhhcCccCCCCcccccc-CCCeEEE
Confidence 355 9999999999987 78999999999999999999999999999999 999999999999988775 4899999
Q ss_pred e-cCCccEEEEeC-CCCCcCCCeEEEEeecCCCCCCC
Q 038845 111 L-TEPRPYYFLSG-RGFCWGGLKAAIFVQETAPTPAP 145 (177)
Q Consensus 111 L-~~~G~~YFic~-~~HC~~GmKl~I~V~~~~~~~~p 145 (177)
| +++|++||||+ ++||++||||+|+|.+..+++++
T Consensus 79 L~~~~G~~YFicg~~gHC~~GmKl~I~V~~~~~~~~~ 115 (138)
T 1jer_A 79 RLDELGMHYFVCTVGTHCSNGQKLSINVVAANATVSM 115 (138)
T ss_dssp ECCSSEEEEEECCSTTTGGGTCEEEEEEECCC-----
T ss_pred eccCCcCEEEEcCCCCccccCCEEEEEEcCCCCCCCC
Confidence 9 99999999999 99999999999999976554433
No 2
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=100.00 E-value=2.8e-40 Score=249.26 Aligned_cols=101 Identities=36% Similarity=0.731 Sum_probs=93.8
Q ss_pred EEEecCCCCCCCC--CCccccCCCCceEeCCEEEEEEcCCCceEEEEcccccccCcCCCccceeccCCceEEEecCCccE
Q 038845 40 LHRVGGKLGWTPS--VNFTEWSSHESFYVNDWLIFNFDKNMYNVLEVNKTSYESCNDKGFIKNITKGGRDVFQLTEPRPY 117 (177)
Q Consensus 40 ~~~VGg~~GW~~~--~~Y~~Wa~~~~F~vGDtLvF~y~~~~H~V~~V~~~~Y~~C~~~~~i~~~~~~G~~~v~L~~~G~~ 117 (177)
+|+|||+.||+.+ .||++||++++|++||+|+|+|++++|+|+||++++|+.|+.++|+..++ +|++.|+|+++|++
T Consensus 4 ~~~VG~~~GW~~~~~~~Y~~Wa~~~~F~vGD~LvF~y~~~~hsV~~V~~~~y~~C~~~~p~~~~~-~G~~~v~L~~~G~~ 82 (109)
T 1ws8_A 4 VHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYT-SGADSIPLKRPGTF 82 (109)
T ss_dssp EEETTGGGCSCSSSCCCHHHHHHTSCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCSSCSEEEC-SSEEEEECCSSEEE
T ss_pred EEEeCCCCCccCCCCcChhHhhcCCcCcCCCEEEEeecCCCceEEEEChHHCCcccCCCcccccC-CCCEEEEECCCcCE
Confidence 9999999999987 89999999999999999999999999999999999999999999988775 58999999999999
Q ss_pred EEEeC-CCCCcCCCeEEEEeecCCC
Q 038845 118 YFLSG-RGFCWGGLKAAIFVQETAP 141 (177)
Q Consensus 118 YFic~-~~HC~~GmKl~I~V~~~~~ 141 (177)
||||+ ++||+.||||+|+|.++++
T Consensus 83 yFic~~~gHC~~GmKl~I~V~~~~s 107 (109)
T 1ws8_A 83 YFLCGIPGHCQLGQKVEIKVDPGSS 107 (109)
T ss_dssp EEECCSTTTTTTTCEEEEEECC---
T ss_pred EEECCCCCcccCCCEEEEEEcCCCC
Confidence 99999 9999999999999985544
No 3
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=100.00 E-value=1.9e-39 Score=247.27 Aligned_cols=102 Identities=25% Similarity=0.487 Sum_probs=92.8
Q ss_pred eEEEecCCCCCCC---CCCccccCCCCceEeCCEEEEEEcCCCceEEEEcccccccCcCCCccceeccCCceEEEecCCc
Q 038845 39 TLHRVGGKLGWTP---SVNFTEWSSHESFYVNDWLIFNFDKNMYNVLEVNKTSYESCNDKGFIKNITKGGRDVFQLTEPR 115 (177)
Q Consensus 39 ~~~~VGg~~GW~~---~~~Y~~Wa~~~~F~vGDtLvF~y~~~~H~V~~V~~~~Y~~C~~~~~i~~~~~~G~~~v~L~~~G 115 (177)
++|+|||+.||+. +.||++|+++++|++||+|+|+|.+++|+|+||++++|+.|+.++++..++ +|++.|+|+++|
T Consensus 2 ~~~~VG~~~GW~~~~~~~~Y~~Wa~~~~f~vGD~L~F~y~~~~HsV~~V~~~~y~~C~~~~~~~~~~-~G~~~v~l~~~G 80 (116)
T 1x9u_A 2 EDYDVGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPISHMT-TPPVKIMLNTTG 80 (116)
T ss_dssp CEEETTGGGCSSCCSSTTHHHHHHTTCCEETTCEEEECCCTTTCCEEEECHHHHHTTCCSSCSEEEC-SSSEEEECCSCE
T ss_pred eEEEECCcCcCcCCCCCcchhhccccccCcCCCEEEEEecCCCCeEEEEChhhcCccCCCCCccccC-CCCeEEEECCCC
Confidence 3899999999996 478999999999999999999999999999999999999999999988775 589999999999
Q ss_pred cEEEEeC-CCCCcCCCeEEE-EeecCCC
Q 038845 116 PYYFLSG-RGFCWGGLKAAI-FVQETAP 141 (177)
Q Consensus 116 ~~YFic~-~~HC~~GmKl~I-~V~~~~~ 141 (177)
++||||+ ++||+.||||+| +|.++++
T Consensus 81 ~~yFic~~~~HC~~Gmkl~In~V~~~~~ 108 (116)
T 1x9u_A 81 PQYYICTVGDHCRVGQKLSINVVGAGGA 108 (116)
T ss_dssp EEEEECCSTTTTTTTCEEEEEEECC---
T ss_pred CEEEECCCCCccccCCEEEEEEECCCCC
Confidence 9999999 999999999999 8876544
No 4
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=5.6e-38 Score=231.71 Aligned_cols=94 Identities=35% Similarity=0.632 Sum_probs=89.1
Q ss_pred EEEecCCCCCCCCCCccccCCCCceEeCCEEEEEEcCCCceEEEEcccccccCcCCCccceeccCCceEEEecCCccEEE
Q 038845 40 LHRVGGKLGWTPSVNFTEWSSHESFYVNDWLIFNFDKNMYNVLEVNKTSYESCNDKGFIKNITKGGRDVFQLTEPRPYYF 119 (177)
Q Consensus 40 ~~~VGg~~GW~~~~~Y~~Wa~~~~F~vGDtLvF~y~~~~H~V~~V~~~~Y~~C~~~~~i~~~~~~G~~~v~L~~~G~~YF 119 (177)
+|+|||+.||++ +|++||++++|++||+|+|+|++++|+|+||++++|++|+.++|+..++ +|++.|+| ++|++||
T Consensus 2 ~~~VG~~~GW~~--~y~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~-~G~~~v~L-~~g~~yF 77 (96)
T 2cbp_A 2 VYVVGGSGGWTF--NTESWPKGKRFRAGDILLFNYNPSMHNVVVVNQGGFSTCNTPAGAKVYT-SGRDQIKL-PKGQSYF 77 (96)
T ss_dssp EEETTGGGCSCS--SCTTTTTTCCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCCTTCEEEC-SSEEEEEC-CSEEEEE
T ss_pred EEEECCcCCCcc--ChhhhccCceEcCCCEEEEEecCCCCEEEEECHHHCCccCCCCCccccc-CCCeEEEe-cCCCEEE
Confidence 799999999997 6999999999999999999999999999999999999999999987775 58999999 9999999
Q ss_pred EeC-CCCCcCCCeEEEEee
Q 038845 120 LSG-RGFCWGGLKAAIFVQ 137 (177)
Q Consensus 120 ic~-~~HC~~GmKl~I~V~ 137 (177)
||+ ++||++||||+|+|+
T Consensus 78 ic~~~~HC~~Gmkl~I~Vl 96 (96)
T 2cbp_A 78 ICNFPGHCQSGMKIAVNAL 96 (96)
T ss_dssp ECCSTTTGGGTCEEEEEEC
T ss_pred EcCCCCccccCCEEEEEEC
Confidence 999 999999999999985
No 5
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1
Probab=100.00 E-value=8e-34 Score=207.73 Aligned_cols=89 Identities=31% Similarity=0.568 Sum_probs=83.3
Q ss_pred EEEecCCCCCCCCCCccccCCCCceEeCCEEEEEEcCCCceEEEEcccccccCcCCCccceeccCCceEEEecCCccEEE
Q 038845 40 LHRVGGKLGWTPSVNFTEWSSHESFYVNDWLIFNFDKNMYNVLEVNKTSYESCNDKGFIKNITKGGRDVFQLTEPRPYYF 119 (177)
Q Consensus 40 ~~~VGg~~GW~~~~~Y~~Wa~~~~F~vGDtLvF~y~~~~H~V~~V~~~~Y~~C~~~~~i~~~~~~G~~~v~L~~~G~~YF 119 (177)
+|+| ||+.+ ++|+++++|++||+|+|+|++++|+|+||++++|+.|+.++|+..++ +|++.|+|+ +|++||
T Consensus 2 ~y~V----gW~~~---~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~-~G~~~v~L~-~g~~yF 72 (91)
T 1f56_A 2 VYNI----GWSFN---VNGARGKSFRAGDVLVFKYIKGQHNVVAVNGRGYASCSAPRGARTYS-SGQDRIKLT-RGQNYF 72 (91)
T ss_dssp EEEE----ECSSS---CBSCTTCCBCTTCEEEEECCBTTBCEEEECHHHHHTTCCCTTCEEEC-SSEEEEECC-SEEEEE
T ss_pred EEEE----eCCCC---CcCcCCccEeCCCEEEEEccCCCCeEEEECHHHcCCcCCCCCccccc-CCCcEEEeC-CCCeEE
Confidence 7899 79987 89999999999999999999999999999999999999999988775 489999996 899999
Q ss_pred EeC-CCCCcCCCeEEEEee
Q 038845 120 LSG-RGFCWGGLKAAIFVQ 137 (177)
Q Consensus 120 ic~-~~HC~~GmKl~I~V~ 137 (177)
||+ ++||+.||||+|+|.
T Consensus 73 ic~~~~HC~~Gmkl~I~v~ 91 (91)
T 1f56_A 73 ICSFPGHCGGGMKIAINAK 91 (91)
T ss_dssp ECCSTTTTTTTCEEEEEEC
T ss_pred EcCCCCccccCCEEEEEEC
Confidence 999 999999999999984
No 6
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=99.22 E-value=3.3e-11 Score=91.66 Aligned_cols=94 Identities=16% Similarity=0.216 Sum_probs=63.6
Q ss_pred ceEEEecCC-CCCCCCCCccccCCCCceEeCCEEEEEEcC-----CCceEEEEccc-ccccC-----------------c
Q 038845 38 GTLHRVGGK-LGWTPSVNFTEWSSHESFYVNDWLIFNFDK-----NMYNVLEVNKT-SYESC-----------------N 93 (177)
Q Consensus 38 ~~~~~VGg~-~GW~~~~~Y~~Wa~~~~F~vGDtLvF~y~~-----~~H~V~~V~~~-~Y~~C-----------------~ 93 (177)
+.++.|+-. .+|.+.+ +..+++.||++.|.+.+ ..|+++..+.. ++..+ +
T Consensus 16 ~~~v~V~~~~~~~~F~P------~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (140)
T 1qhq_A 16 AQTVEVRAAPDALAFAQ------TSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPD 89 (140)
T ss_dssp SEEEEEEBCSSSSSBSC------SEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTT
T ss_pred CEEEEEEEeCCCceEeC------CeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccc
Confidence 457777764 3587765 46889999999999876 47999887422 22111 0
Q ss_pred CCCcc---ceecc--CCceEEEecCCccEEEEeC-CCCCcCCCeEEEEee
Q 038845 94 DKGFI---KNITK--GGRDVFQLTEPRPYYFLSG-RGFCWGGLKAAIFVQ 137 (177)
Q Consensus 94 ~~~~i---~~~~~--~G~~~v~L~~~G~~YFic~-~~HC~~GmKl~I~V~ 137 (177)
..+.+ ..... ++...++++++|.|||+|+ ++||+.|||..|+|.
T Consensus 90 ~~~~~~~t~~l~pG~~~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 90 TPNALAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp CTTEEEECCCBCTTEEEEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred cccccccceeeCCCceeEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 00100 01111 1334678889999999999 899999999999996
No 7
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=99.20 E-value=4.3e-11 Score=83.78 Aligned_cols=87 Identities=16% Similarity=0.108 Sum_probs=62.0
Q ss_pred eEEEecCC-CCCCCCCCccccCCCCceEeCCEEEEEEcC-CCceEEEEcccccccCcCCCccceeccCCceEEEecCCcc
Q 038845 39 TLHRVGGK-LGWTPSVNFTEWSSHESFYVNDWLIFNFDK-NMYNVLEVNKTSYESCNDKGFIKNITKGGRDVFQLTEPRP 116 (177)
Q Consensus 39 ~~~~VGg~-~GW~~~~~Y~~Wa~~~~F~vGDtLvF~y~~-~~H~V~~V~~~~Y~~C~~~~~i~~~~~~G~~~v~L~~~G~ 116 (177)
.++.+|++ .+|.+.+ +..++++||+|.|.+.. ..|+|...+...+. . .. .....+....++++++|.
T Consensus 3 ~~v~~~~~~~~~~f~P------~~i~v~~Gd~V~~~n~~~~~H~v~~~~~~~~~---~-~~-~~~~~g~~~~~~f~~~G~ 71 (91)
T 1bxv_A 3 VAIKMGADNGMLAFEP------STIEIQAGDTVQWVNNKLAPHNVVVEGQPELS---H-KD-LAFSPGETFEATFSEPGT 71 (91)
T ss_dssp EEEEESCTTSCSSEES------SEEEECTTCEEEEEECSSCCEEEEETTCGGGC---E-EE-EECSTTCEEEEECCSCEE
T ss_pred EEEEEecCCCccEEeC------CEEEECCCCEEEEEECCCCCcEEEEeCCCccC---c-cc-ceeCCCCEEEEEeCCCEE
Confidence 35677764 4566654 35789999999999885 58999876533221 0 00 112223345788899999
Q ss_pred EEEEeCCCCCcCCCeEEEEee
Q 038845 117 YYFLSGRGFCWGGLKAAIFVQ 137 (177)
Q Consensus 117 ~YFic~~~HC~~GmKl~I~V~ 137 (177)
|+|+|. .||..||+..|.|.
T Consensus 72 y~~~C~-~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 72 YTYYCE-PHRGAGMVGKIVVQ 91 (91)
T ss_dssp EEEECT-TTGGGTCEEEEEEC
T ss_pred EEEEeC-CCccCCCEEEEEEC
Confidence 999998 89999999999984
No 8
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.03 E-value=3.5e-10 Score=88.63 Aligned_cols=76 Identities=16% Similarity=0.132 Sum_probs=57.9
Q ss_pred CCceEeCCEEEEEEcCC----CceEEEEc-ccccccCcCCCccceec------cCC---ce--EEEecCCccEEEEeC-C
Q 038845 61 HESFYVNDWLIFNFDKN----MYNVLEVN-KTSYESCNDKGFIKNIT------KGG---RD--VFQLTEPRPYYFLSG-R 123 (177)
Q Consensus 61 ~~~F~vGDtLvF~y~~~----~H~V~~V~-~~~Y~~C~~~~~i~~~~------~~G---~~--~v~L~~~G~~YFic~-~ 123 (177)
..++++||+|+|++.+. .|++..++ ...|+.|.....+.... ..| .. .+++ ++|+|||+|. +
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~-~pGtY~y~C~~~ 140 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP-TAGTYYYVCQIP 140 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC-CSEEEEEECCST
T ss_pred EEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEEE-CCceEEEECCCC
Confidence 46789999999999863 59999985 56788887654332110 123 33 4577 9999999999 9
Q ss_pred CCCcCCCeEEEEee
Q 038845 124 GFCWGGLKAAIFVQ 137 (177)
Q Consensus 124 ~HC~~GmKl~I~V~ 137 (177)
+||+.||+..|.|.
T Consensus 141 gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 141 GMAATGMFGKIVVK 154 (154)
T ss_dssp TTGGGTCEEEEEEC
T ss_pred CHHHCCCEEEEEEC
Confidence 99999999999884
No 9
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.98 E-value=7.3e-10 Score=83.97 Aligned_cols=83 Identities=16% Similarity=0.107 Sum_probs=58.7
Q ss_pred cCCCCCCCCCCccccCCCCceEeCCEEEEEEcCCCceEEEEcccccccCcCCCccceec--cCCceEEEecCCccEEEEe
Q 038845 44 GGKLGWTPSVNFTEWSSHESFYVNDWLIFNFDKNMYNVLEVNKTSYESCNDKGFIKNIT--KGGRDVFQLTEPRPYYFLS 121 (177)
Q Consensus 44 Gg~~GW~~~~~Y~~Wa~~~~F~vGDtLvF~y~~~~H~V~~V~~~~Y~~C~~~~~i~~~~--~~G~~~v~L~~~G~~YFic 121 (177)
|++.+..+.+ +..++.+||+|.|.+.+..|+|+..+ .|...+. ..+. .+....++++++|.|+|+|
T Consensus 11 g~~g~~~F~P------~~i~V~~GdtV~f~n~~~~H~v~~~~-----~~~p~~~-~~~~~~pG~t~~~tF~~~G~y~y~C 78 (123)
T 1pmy_A 11 GPGGMMVFDP------ALVRLKPGDSIKFLPTDKGHNVETIK-----GMAPDGA-DYVKTTVGQEAVVKFDKEGVYGFKC 78 (123)
T ss_dssp ETTEEEEEES------SEEEECTTCEEEEECSSSSCCCEECT-----TSSCTTC-CCCBCCTTSCEEEECCSCEEEEEEC
T ss_pred cCCCCceEeC------CEEEECCCCEEEEEECCCCcEEEEec-----ccCCCCc-cceecCCCCEEEEEeCCCeEEEEEe
Confidence 5444455544 35789999999999988899998642 2222111 0111 1223478999999999999
Q ss_pred CCCCCcCCCeEEEEeecC
Q 038845 122 GRGFCWGGLKAAIFVQET 139 (177)
Q Consensus 122 ~~~HC~~GmKl~I~V~~~ 139 (177)
. .||+.||+..|+|.++
T Consensus 79 ~-~H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 79 A-PHYMMGMVALVVVGDK 95 (123)
T ss_dssp S-TTTTTTCEEEEEESSC
T ss_pred C-CccccCCEEEEEEcCC
Confidence 7 6999999999999854
No 10
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.96 E-value=1e-09 Score=83.12 Aligned_cols=87 Identities=16% Similarity=0.062 Sum_probs=60.4
Q ss_pred EEEe---cCCCCCCCCCCccccCCCCceEeCCEEEEEEcCCCceEEEEcccccccCcCCCccceecc-CC-ceEEEecCC
Q 038845 40 LHRV---GGKLGWTPSVNFTEWSSHESFYVNDWLIFNFDKNMYNVLEVNKTSYESCNDKGFIKNITK-GG-RDVFQLTEP 114 (177)
Q Consensus 40 ~~~V---Gg~~GW~~~~~Y~~Wa~~~~F~vGDtLvF~y~~~~H~V~~V~~~~Y~~C~~~~~i~~~~~-~G-~~~v~L~~~ 114 (177)
++.+ |++.+..+.+ +..++.+||++.|.+.+..|+|+... .|...+.. .+.. .| ...++++++
T Consensus 4 ~V~m~~~g~~g~~~F~P------~~i~V~~GdtV~f~~~~~~H~v~~~~-----~~~p~~~~-~~~~~pG~t~~~tF~~~ 71 (123)
T 1paz_A 4 EVHMLNKGAEGAMVFEP------AYIKANPGDTVTFIPVDKGHNVESIK-----DMIPEGAE-KFKSKINENYVLTVTQP 71 (123)
T ss_dssp EEEEEEEETTEEEEEES------SEEEECTTCEEEEEESSSSCCCEECT-----TCSCTTCC-CCBCCTTCCEEEECCSC
T ss_pred EEEEEeccCCCCceEeC------CEEEECCCCEEEEEECCCCeEEEEec-----ccCCCCcc-ceecCCCCEEEEEeCCC
Confidence 4445 5544455544 35789999999999998889998631 22221110 1111 13 347899999
Q ss_pred ccEEEEeCCCCCcCCCeEEEEeecC
Q 038845 115 RPYYFLSGRGFCWGGLKAAIFVQET 139 (177)
Q Consensus 115 G~~YFic~~~HC~~GmKl~I~V~~~ 139 (177)
|.|+|+|. .||+.||+..|+|.++
T Consensus 72 G~y~y~C~-~H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 72 GAYLVKCT-PHYAMGMIALIAVGDS 95 (123)
T ss_dssp EEEEEECT-TTGGGTCEEEEEESSS
T ss_pred EEEEEEeC-CcccCCCEEEEEEcCC
Confidence 99999997 6999999999999853
No 11
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.92 E-value=2.2e-09 Score=76.84 Aligned_cols=92 Identities=18% Similarity=0.084 Sum_probs=61.3
Q ss_pred eEEEecCC-CCCCCCCCccccCCCCceEeCCEEEEEEcC-CCceEEEEcc---cccccCcCCCccceeccCCceEEEecC
Q 038845 39 TLHRVGGK-LGWTPSVNFTEWSSHESFYVNDWLIFNFDK-NMYNVLEVNK---TSYESCNDKGFIKNITKGGRDVFQLTE 113 (177)
Q Consensus 39 ~~~~VGg~-~GW~~~~~Y~~Wa~~~~F~vGDtLvF~y~~-~~H~V~~V~~---~~Y~~C~~~~~i~~~~~~G~~~v~L~~ 113 (177)
.++.+|++ .++.+.+ +..++++||++.|.+.. ..|+|...+. ++++.+...........+....+++++
T Consensus 2 ~~V~m~~~~~~~~F~P------~~i~v~~GdtV~~~n~~~~~H~v~~~~~~~p~g~~~~~~~~~~~~~~~g~~~~~tf~~ 75 (98)
T 1iuz_A 2 QIVKLGGDDGSLAFVP------SKISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISYDDYLNSKGETVVRKLST 75 (98)
T ss_dssp EEEEESCTTSCCSEES------SEEEECTTCEEEEEECSSCCEEEEECTTSSCTTCCHHHHCEEEEECSTTCEEEEECCS
T ss_pred EEEEEecCCCCcEEeC------CEEEECCCCEEEEEECCCCCEEEEEeCCCCccccccccccccccccCCCCEEEEEcCC
Confidence 36667654 3566654 35789999999999877 4899986542 123332211100112222234788899
Q ss_pred CccEEEEeCCCCCcCCCeEEEEee
Q 038845 114 PRPYYFLSGRGFCWGGLKAAIFVQ 137 (177)
Q Consensus 114 ~G~~YFic~~~HC~~GmKl~I~V~ 137 (177)
+|.|+|+|.. ||+.||+..|.|.
T Consensus 76 ~G~y~y~C~~-H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 76 PGVYGVYCEP-HAGAGMKMTITVQ 98 (98)
T ss_dssp CEEEEEECTT-TGGGTCEEEEEEC
T ss_pred CEEEEEEchh-hccCCCEEEEEEC
Confidence 9999999985 9999999999984
No 12
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.86 E-value=3.2e-09 Score=76.34 Aligned_cols=90 Identities=14% Similarity=0.043 Sum_probs=60.4
Q ss_pred eEEEecCC-CCCCCCCCccccCCCCceEeCCEEEEEEcC-CCceEEEEcccccc-----c--CcCCCccceeccCCceEE
Q 038845 39 TLHRVGGK-LGWTPSVNFTEWSSHESFYVNDWLIFNFDK-NMYNVLEVNKTSYE-----S--CNDKGFIKNITKGGRDVF 109 (177)
Q Consensus 39 ~~~~VGg~-~GW~~~~~Y~~Wa~~~~F~vGDtLvF~y~~-~~H~V~~V~~~~Y~-----~--C~~~~~i~~~~~~G~~~v 109 (177)
.++.+|.+ .++.+.+ +..++++||++.|.+.. ..|++...+....+ . +.... .....+....+
T Consensus 4 ~~V~~~~~~~~~~F~P------~~i~v~~Gd~V~~~n~~~~~H~~~~~~~~~~~~~g~~~~~~~~~~--~~~~pG~~~~~ 75 (106)
T 2gim_A 4 YTVKLGSDKGLLVFEP------AKLTIKPGDTVEFLNNKVPPHNVVFDAALNPAKSADLAKSLSHKQ--LLMSPGQSTST 75 (106)
T ss_dssp EEEEESCTTCCSSEES------SEEEECTTCEEEEEECSSSCCCBEECSSSSTTCCHHHHHHHCBCS--CCCSTTCEEEE
T ss_pred EEEEEEecCCcceEcC------CEEEECCCCEEEEEECCCCCceEEEeCCCCcccccccchhccccc--eeeCCCCEEEE
Confidence 46677754 4677654 35789999999999776 47999864321100 0 00111 11212234567
Q ss_pred Ee---cCCccEEEEeCCCCCcCCCeEEEEee
Q 038845 110 QL---TEPRPYYFLSGRGFCWGGLKAAIFVQ 137 (177)
Q Consensus 110 ~L---~~~G~~YFic~~~HC~~GmKl~I~V~ 137 (177)
++ +++|.|+|+|. .||+.||+..|.|.
T Consensus 76 ~f~~~~~~G~y~y~C~-~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 76 TFPADAPAGEYTFYCE-PHRGAGMVGKITVA 105 (106)
T ss_dssp ECCTTCCSEEEEEECT-TTGGGTCEEEEEEC
T ss_pred EEecCCCCceEEEEeC-ChhhcCcEEEEEEc
Confidence 88 78999999998 89999999999996
No 13
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.84 E-value=6.8e-09 Score=74.02 Aligned_cols=91 Identities=13% Similarity=0.043 Sum_probs=60.5
Q ss_pred EEEecCC-CCCCCCCCccccCCCCceEeCCEEEEEEcCC-CceEEEEccc---ccccCcCC--CccceeccCCceEEEec
Q 038845 40 LHRVGGK-LGWTPSVNFTEWSSHESFYVNDWLIFNFDKN-MYNVLEVNKT---SYESCNDK--GFIKNITKGGRDVFQLT 112 (177)
Q Consensus 40 ~~~VGg~-~GW~~~~~Y~~Wa~~~~F~vGDtLvF~y~~~-~H~V~~V~~~---~Y~~C~~~--~~i~~~~~~G~~~v~L~ 112 (177)
++.+|++ .+..+.+ +..++++||+|.|....+ .|++...+.. +.+.+... ........+....++++
T Consensus 2 ~v~m~~~~~~~~F~P------~~i~v~~G~tV~~~n~~~~~H~v~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~tf~ 75 (99)
T 1plc_A 2 DVLLGADDGSLAFVP------SEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVALS 75 (99)
T ss_dssp EEEESCTTCCSCEES------SEEEECTTCEEEEEECSSCCBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEEEEECC
T ss_pred EEEEecCCCcceEeC------CEEEECCCCEEEEEECCCCceEEEEeCCCCcccccccccccccCccccCCCCEEEEEEC
Confidence 5667754 3455544 357899999999988874 8999876421 12222110 00001222233478899
Q ss_pred CCccEEEEeCCCCCcCCCeEEEEee
Q 038845 113 EPRPYYFLSGRGFCWGGLKAAIFVQ 137 (177)
Q Consensus 113 ~~G~~YFic~~~HC~~GmKl~I~V~ 137 (177)
++|.|.|+|. .||+.||+..|.|.
T Consensus 76 ~~G~y~~~C~-~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 76 NKGEYSFYCS-PHQGAGMVGKVTVN 99 (99)
T ss_dssp SCEEEEEECG-GGTTTTCEEEEEEC
T ss_pred CCceEEEEcC-CCcccCCEEEEEEC
Confidence 9999999998 89999999999984
No 14
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.80 E-value=6.1e-09 Score=79.55 Aligned_cols=85 Identities=15% Similarity=0.033 Sum_probs=60.2
Q ss_pred ecCCC-CCCCCCCccccCCCCceEeCCEEEEEEcCCCceEEEEcccccccCcCCCccceec--cCCceEEEecCCccEEE
Q 038845 43 VGGKL-GWTPSVNFTEWSSHESFYVNDWLIFNFDKNMYNVLEVNKTSYESCNDKGFIKNIT--KGGRDVFQLTEPRPYYF 119 (177)
Q Consensus 43 VGg~~-GW~~~~~Y~~Wa~~~~F~vGDtLvF~y~~~~H~V~~V~~~~Y~~C~~~~~i~~~~--~~G~~~v~L~~~G~~YF 119 (177)
+|.+. +..+.+ +..++++||++.|.+.+..|+|...+. +...... .+. .+....++++++|.|+|
T Consensus 11 ~g~~g~~~~F~P------~~i~V~~GDtVtf~n~~~~H~v~~~~~-----~~P~g~~-~f~s~pGet~s~TF~~pG~y~y 78 (127)
T 3tu6_A 11 KAADGRVMAFEP------AVIRAQPGDTVTFVAKDKGHNSALMKG-----GAPEGAE-TWKGKINEEITVTLSKPGVYMY 78 (127)
T ss_dssp ECTTSCEEEEES------SEEEECTTCEEEEECSSSSCCCEECTT-----CSCTTCC-CCBCCTTCCCEEECCSCEEEEE
T ss_pred cCCCCcccEEeC------CEEEECCCCEEEEEECCCCceEEEccC-----cCCCCcc-ceecCCCCEEEEEeCCCeEEEE
Confidence 36544 355554 458899999999999988899986432 1111110 111 12335789999999999
Q ss_pred EeCCCCCcCCCeEEEEeecCC
Q 038845 120 LSGRGFCWGGLKAAIFVQETA 140 (177)
Q Consensus 120 ic~~~HC~~GmKl~I~V~~~~ 140 (177)
+|. .||..||+..|.|.+++
T Consensus 79 ~C~-~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 79 QCA-PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp ECT-TTGGGTCEEEEEESSCT
T ss_pred EeC-CCCcCCcEEEEEECcCC
Confidence 998 69999999999998654
No 15
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.80 E-value=3e-08 Score=75.21 Aligned_cols=94 Identities=13% Similarity=0.161 Sum_probs=62.8
Q ss_pred ccceEEEecCC-CCCCCCCCccccCCCCceEeCCEEEEEEcCC----CceEEEEccc------------------ccccC
Q 038845 36 GTGTLHRVGGK-LGWTPSVNFTEWSSHESFYVNDWLIFNFDKN----MYNVLEVNKT------------------SYESC 92 (177)
Q Consensus 36 A~~~~~~VGg~-~GW~~~~~Y~~Wa~~~~F~vGDtLvF~y~~~----~H~V~~V~~~------------------~Y~~C 92 (177)
++..++.||.. .++.+.+ +..++++||++.|++.+. .|++...+.. +|..|
T Consensus 16 ~~~~~V~v~~~~~~~~F~p------~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~ 89 (139)
T 2aan_A 16 SGPVTIEIGSKGEELAFDK------TELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPA 89 (139)
T ss_dssp -CCEEEEEEBCTTSSSBSC------SEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCS
T ss_pred CcCEEEEEEecCCccEEcC------CeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCc
Confidence 33456777532 3566654 357899999999988764 6999887532 46666
Q ss_pred cCCCccc---eeccCCc-eEEE--ecCCccEEEEeC-CCCCcCCCeEEEEee
Q 038845 93 NDKGFIK---NITKGGR-DVFQ--LTEPRPYYFLSG-RGFCWGGLKAAIFVQ 137 (177)
Q Consensus 93 ~~~~~i~---~~~~~G~-~~v~--L~~~G~~YFic~-~~HC~~GmKl~I~V~ 137 (177)
+..+.+. .. ..|. ..++ .+++|.|+|+|. ++||+ ||+..|.|.
T Consensus 90 ~~~~~~~~t~~l-~pGet~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 90 DKSNIIAESPLA-NGNETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp CCTTEEEECCCB-CTTCEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred cccccccccccc-CCCCEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 5332211 11 1232 3444 458999999999 89999 999999884
No 16
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.80 E-value=4.2e-09 Score=79.96 Aligned_cols=75 Identities=15% Similarity=0.098 Sum_probs=55.2
Q ss_pred CCCceEeCCEEEEEEcCCCceEEEEcccccccCcCCCccceec--cCCceEEEecCCccEEEEeCCCCCcCCCeEEEEee
Q 038845 60 SHESFYVNDWLIFNFDKNMYNVLEVNKTSYESCNDKGFIKNIT--KGGRDVFQLTEPRPYYFLSGRGFCWGGLKAAIFVQ 137 (177)
Q Consensus 60 ~~~~F~vGDtLvF~y~~~~H~V~~V~~~~Y~~C~~~~~i~~~~--~~G~~~v~L~~~G~~YFic~~~HC~~GmKl~I~V~ 137 (177)
+..++++||++.|.+.+..|+|...+. +...+. ..+. .+....++++++|.|+|+|. .||..||+-.|.|.
T Consensus 21 ~~i~V~~GdtV~f~~~~~~H~v~~~~~-----~~P~g~-~~f~~~pg~t~s~TF~~pG~y~y~C~-~H~~~GM~G~I~V~ 93 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDKSHNVEAIKE-----ILPEGV-ESFKSKINESYTLTVTEPGLYGVKCT-PHFGMGMVGLVQVG 93 (123)
T ss_dssp SEEEECTTEEEEEEESSTTCCCEECTT-----SSCTTC-CCCBCCTTCCEEEEECSCEEEEEECG-GGTTTTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCceEEEcCC-----cCCCCc-cceecCCCCEEEEEeCCCeEEEEEeC-CCCcCCcEEEEEEC
Confidence 468899999999999988899986421 222211 1111 12335789999999999997 79999999999998
Q ss_pred cCCC
Q 038845 138 ETAP 141 (177)
Q Consensus 138 ~~~~ 141 (177)
+.++
T Consensus 94 ~~~~ 97 (123)
T 3erx_A 94 DAPE 97 (123)
T ss_dssp SSCT
T ss_pred CCCC
Confidence 6443
No 17
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.79 E-value=1e-08 Score=78.22 Aligned_cols=83 Identities=13% Similarity=0.031 Sum_probs=59.6
Q ss_pred cCCCC--CCCCCCccccCCCCceEeCCEEEEEEcCCCceEEEEcccccccCcCCCccc-eeccCCceEEEecCCccEEEE
Q 038845 44 GGKLG--WTPSVNFTEWSSHESFYVNDWLIFNFDKNMYNVLEVNKTSYESCNDKGFIK-NITKGGRDVFQLTEPRPYYFL 120 (177)
Q Consensus 44 Gg~~G--W~~~~~Y~~Wa~~~~F~vGDtLvF~y~~~~H~V~~V~~~~Y~~C~~~~~i~-~~~~~G~~~v~L~~~G~~YFi 120 (177)
+|++| +.+.+ +..+..+||++.|.+.+..|||...+. +-..+... ....+....++++++|.|.|+
T Consensus 10 ~g~~G~~~~F~P------~~i~V~~GDTV~f~n~~~~Hnv~~~~~-----~~p~g~~~~~~~pg~t~s~TF~~~G~y~Y~ 78 (124)
T 3ef4_A 10 KDDAGNTMVFQP------GFVKVEAGDTVKFVPTDKSHNAESVRE-----VWPEGVAPVKGGFSKEVVFNAEKEGLYVLK 78 (124)
T ss_dssp ECTTSCEEEEES------SEEEECTTCEEEEECSSSSCCCEECTT-----TSCTTSCCCBCCTTCCEEEECCSSEEEEEE
T ss_pred cCCCCceeEEeC------CEEEECCCCEEEEEECCCCccEEEeCC-----cCCCCccccccCCCCEEEEEeCCCeEEEEE
Confidence 34444 77765 358899999999999988999986431 22222111 011123357899999999999
Q ss_pred eCCCCCcCCCeEEEEeec
Q 038845 121 SGRGFCWGGLKAAIFVQE 138 (177)
Q Consensus 121 c~~~HC~~GmKl~I~V~~ 138 (177)
|. .||..||+-.|.|.+
T Consensus 79 C~-~H~~~GM~G~I~V~~ 95 (124)
T 3ef4_A 79 CA-PHYGMGMVVLVQVGK 95 (124)
T ss_dssp CT-TTGGGTCEEEEEESS
T ss_pred cC-CCCcCCCEEEEEECC
Confidence 96 799999999999986
No 18
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.78 E-value=8.6e-09 Score=73.10 Aligned_cols=92 Identities=12% Similarity=0.011 Sum_probs=60.6
Q ss_pred eEEEecCC-CCCCCCCCccccCCCCceEeCCEEEEEEcCC-CceEEEEcc---cccccCcCCCccceeccCCceEEEecC
Q 038845 39 TLHRVGGK-LGWTPSVNFTEWSSHESFYVNDWLIFNFDKN-MYNVLEVNK---TSYESCNDKGFIKNITKGGRDVFQLTE 113 (177)
Q Consensus 39 ~~~~VGg~-~GW~~~~~Y~~Wa~~~~F~vGDtLvF~y~~~-~H~V~~V~~---~~Y~~C~~~~~i~~~~~~G~~~v~L~~ 113 (177)
.++.+|++ .++.+.+ +..++++||++.|..... .|++...+. .+++.+...........+....+++++
T Consensus 2 ~~V~m~~~~~~~~F~P------~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~p~~~~~~~~~~~~~~~~pG~~~~~tf~~ 75 (98)
T 2plt_A 2 ATVKLGADSGALEFVP------KTLTIKSGETVNFVNNAGFPHNIVFDEDAIPSGVNADAISRDDYLNAPGETYSVKLTA 75 (98)
T ss_dssp EEEEESCTTCCSSEES------SEEEECTTCEEEEEECSSCCEEEEECGGGSCTTCCHHHHCEEEEECSTTCEEEEECCS
T ss_pred EEEEEecCCCCceEeC------CEEEECCCCEEEEEECCCCceEEEEeCCCCCCccccccccccceecCCCCEEEEEeCC
Confidence 46777754 3566554 347899999999988764 799986532 122222111000112222334788899
Q ss_pred CccEEEEeCCCCCcCCCeEEEEee
Q 038845 114 PRPYYFLSGRGFCWGGLKAAIFVQ 137 (177)
Q Consensus 114 ~G~~YFic~~~HC~~GmKl~I~V~ 137 (177)
+|+|.|.|. .||+.||+..|.|.
T Consensus 76 ~G~y~y~C~-~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 76 AGEYGYYCE-PHQGAGMVGKIIVQ 98 (98)
T ss_dssp CEEEEEECG-GGGGGTCEEEEEEC
T ss_pred CeEEEEEcC-CccccCCeEEEEEC
Confidence 999999998 79999999999984
No 19
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.76 E-value=1.9e-08 Score=71.96 Aligned_cols=91 Identities=11% Similarity=0.005 Sum_probs=60.7
Q ss_pred EEEecCC-CCCCCCCCccccCCCCceEeCCEEEEEEcC-CCceEEEEcccccc----cCcCCCcc----ceeccCCceEE
Q 038845 40 LHRVGGK-LGWTPSVNFTEWSSHESFYVNDWLIFNFDK-NMYNVLEVNKTSYE----SCNDKGFI----KNITKGGRDVF 109 (177)
Q Consensus 40 ~~~VGg~-~GW~~~~~Y~~Wa~~~~F~vGDtLvF~y~~-~~H~V~~V~~~~Y~----~C~~~~~i----~~~~~~G~~~v 109 (177)
++.+|++ .++.+.+ +..++++||++.|.... ..|++...+...++ .|+....+ .....+....+
T Consensus 2 ~V~~g~~~~~~~F~P------~~i~v~~G~tV~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~ 75 (102)
T 1kdj_A 2 KVEVGDEVGNFKFYP------DSITVSAGEAVEFTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKA 75 (102)
T ss_dssp EEEESCTTCCCCEES------SEEEECTTCCEEEEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEE
T ss_pred EEEEecCCCccEEeC------CEEEECCCCEEEEEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCCEEEE
Confidence 5677764 3455544 35789999999999776 47999865433221 12111111 01222234578
Q ss_pred EecCCccEEEEeCCCCCcCCCeEEEEee
Q 038845 110 QLTEPRPYYFLSGRGFCWGGLKAAIFVQ 137 (177)
Q Consensus 110 ~L~~~G~~YFic~~~HC~~GmKl~I~V~ 137 (177)
+++++|.|.|+|. .||+.||+..|.|.
T Consensus 76 tf~~~G~y~y~C~-~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 76 KVSTPGTYTFYCT-PHKSANMKGTLTVK 102 (102)
T ss_dssp CCCSCEEEEEECS-TTGGGTCEEEEEEC
T ss_pred EeCCCeEEEEEeC-CCcccCCeEEEEEC
Confidence 8899999999998 89999999999984
No 20
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.73 E-value=1.7e-08 Score=71.84 Aligned_cols=91 Identities=18% Similarity=0.067 Sum_probs=60.2
Q ss_pred EEEecCC-CCCCCCCCccccCCCCceEeCCEEEEEEcCC-CceEEEEcc---cccccCcCC--CccceeccCCceEEEec
Q 038845 40 LHRVGGK-LGWTPSVNFTEWSSHESFYVNDWLIFNFDKN-MYNVLEVNK---TSYESCNDK--GFIKNITKGGRDVFQLT 112 (177)
Q Consensus 40 ~~~VGg~-~GW~~~~~Y~~Wa~~~~F~vGDtLvF~y~~~-~H~V~~V~~---~~Y~~C~~~--~~i~~~~~~G~~~v~L~ 112 (177)
++.+|++ .+..+.+ +..++++||++.|..... .|++...+. .+++.+... ........+....++++
T Consensus 2 ~V~~~~~~~~~~F~P------~~i~v~~G~tV~~~n~~~~~H~~~~~~~~~p~g~~~~~~~~~~~~~~~~~G~~~~~~f~ 75 (99)
T 1byp_A 2 EVLLGSSDGGLAFVP------SDLSIASGEKITFKNNAGFPHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVTLT 75 (99)
T ss_dssp EEEESCTTSCCSEES------SEEEECTTEEEEEEECSSCCBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEEEEC
T ss_pred EEEEecCCCcceEeC------CEEEECCCCEEEEEECCCCcceEEEeCCCCccccccccccccccceeeCCCCEEEEEeC
Confidence 5667654 4566544 357899999999988874 799976542 122222110 00001122233478889
Q ss_pred CCccEEEEeCCCCCcCCCeEEEEee
Q 038845 113 EPRPYYFLSGRGFCWGGLKAAIFVQ 137 (177)
Q Consensus 113 ~~G~~YFic~~~HC~~GmKl~I~V~ 137 (177)
++|.|.|+|. .||+.||+..|.|.
T Consensus 76 ~~G~y~~~C~-~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 76 EKGTYKFYCA-PHAGAGMVGKVTVN 99 (99)
T ss_dssp SCEEEEEECG-GGTTTTCEEEEEEC
T ss_pred CCcEEEEEcC-CccccCCEEEEEEC
Confidence 9999999998 89999999999984
No 21
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.71 E-value=3.4e-08 Score=69.97 Aligned_cols=90 Identities=18% Similarity=0.151 Sum_probs=60.4
Q ss_pred eEEEecCC-CCCCCCCCccccCCCCceEeCCEEEEEEcC-CCceEEEEcccc---cccCcCCCccceeccCCceEEEecC
Q 038845 39 TLHRVGGK-LGWTPSVNFTEWSSHESFYVNDWLIFNFDK-NMYNVLEVNKTS---YESCNDKGFIKNITKGGRDVFQLTE 113 (177)
Q Consensus 39 ~~~~VGg~-~GW~~~~~Y~~Wa~~~~F~vGDtLvF~y~~-~~H~V~~V~~~~---Y~~C~~~~~i~~~~~~G~~~v~L~~ 113 (177)
.++.+|++ .++.+.+ +..++++||++.|.+.. ..|++...+... .+.+..... ....+....+++++
T Consensus 3 ~~V~~~~~~~~~~F~P------~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~tf~~ 74 (97)
T 1b3i_A 3 VQIKMGTDKYAPLYEP------KALSISAGDTVEFVMNKVGPHNVIFDKVPAGESAPALSNTKL--AIAPGSFYSVTLGT 74 (97)
T ss_dssp EEEEEEETTTEEEEES------SEEEECTTCEEEEEECSSCCCCBEEEECCTTSCHHHHCBCCC--CCSCSCCEEEECCS
T ss_pred EEEEEeccCCccEEeC------CEEEECCCCEEEEEECCCCCeEEEEeCCCCccccccccccce--ecCCCCEEEEEeCC
Confidence 35667654 4455544 35789999999999876 379998764221 111111111 12223345788899
Q ss_pred CccEEEEeCCCCCcCCCeEEEEee
Q 038845 114 PRPYYFLSGRGFCWGGLKAAIFVQ 137 (177)
Q Consensus 114 ~G~~YFic~~~HC~~GmKl~I~V~ 137 (177)
+|.|.|+|. .||+.||+..|.|.
T Consensus 75 ~G~y~y~C~-~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 75 PGTYSFYCT-PHRGAGMVGTITVE 97 (97)
T ss_dssp CSEEEEECS-STTTTTCEEEEEEC
T ss_pred CeEEEEEcc-ChhhcCCEEEEEEC
Confidence 999999998 89999999999984
No 22
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.63 E-value=3.8e-08 Score=69.82 Aligned_cols=92 Identities=12% Similarity=0.048 Sum_probs=59.3
Q ss_pred eEEEecCC-CCCCCCCCccccCCCCceEeCCEEEEEEcC-CCceEEEEcccc--cccCcCCCccceeccCCceEEEecCC
Q 038845 39 TLHRVGGK-LGWTPSVNFTEWSSHESFYVNDWLIFNFDK-NMYNVLEVNKTS--YESCNDKGFIKNITKGGRDVFQLTEP 114 (177)
Q Consensus 39 ~~~~VGg~-~GW~~~~~Y~~Wa~~~~F~vGDtLvF~y~~-~~H~V~~V~~~~--Y~~C~~~~~i~~~~~~G~~~v~L~~~ 114 (177)
.++.+|.+ .++.+.+ +..++++||++.|.... ..|++...+... -+..+..........+....++++++
T Consensus 3 ~~V~~~~~~~~~~F~P------~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~pg~~~~~~~~~~~~~~pG~~~~~tf~~~ 76 (98)
T 1pcs_A 3 ATVKMGSDSGALVFEP------STVTIKAGEEVKWVNNKLSPHNIVFDADGVPADTAAKLSHKGLLFAAGESFTSTFTEP 76 (98)
T ss_dssp EEEEESCTTSCSSEES------SEEEECTTCEEEEEECSSCCEEEEECCSSSCHHHHHHHCEEEEECSTTCEEEEECCSC
T ss_pred EEEEEecCCCccEEeC------CEEEECCCCEEEEEECCCCCcEEEEeCCCCCccccccccccccccCCCCEEEEEcCCC
Confidence 45667654 4566554 35789999999999776 479998653210 00000000001111223346788999
Q ss_pred ccEEEEeCCCCCcCCCeEEEEee
Q 038845 115 RPYYFLSGRGFCWGGLKAAIFVQ 137 (177)
Q Consensus 115 G~~YFic~~~HC~~GmKl~I~V~ 137 (177)
|+|.|.|. .||+.||+..|.|.
T Consensus 77 G~y~~~C~-~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 77 GTYTYYCE-PHRGAGMVGKVVVE 98 (98)
T ss_dssp EEEEEECG-GGTTTTCEEEEEEC
T ss_pred eEEEEEcC-CccccCCeEEEEEC
Confidence 99999998 79999999999984
No 23
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=98.22 E-value=1.3e-06 Score=65.76 Aligned_cols=71 Identities=13% Similarity=0.054 Sum_probs=50.4
Q ss_pred CCCceEeCCEEEEEEcCCCceEEEEcccccccCcCCCccceec--cCCceEEEecCCccEEEEeCCCCCcCCCeEEEEee
Q 038845 60 SHESFYVNDWLIFNFDKNMYNVLEVNKTSYESCNDKGFIKNIT--KGGRDVFQLTEPRPYYFLSGRGFCWGGLKAAIFVQ 137 (177)
Q Consensus 60 ~~~~F~vGDtLvF~y~~~~H~V~~V~~~~Y~~C~~~~~i~~~~--~~G~~~v~L~~~G~~YFic~~~HC~~GmKl~I~V~ 137 (177)
+..++++||++.|......|+|...+ .+-..+.. .+. .+....++++++|.|.|+|.. |+. |+..|.|.
T Consensus 21 ~~i~V~~GdtV~f~n~d~~H~v~~~~-----~~~p~~~~-~~~~~~g~t~~~tF~~~G~y~y~C~~-H~~--M~G~I~V~ 91 (122)
T 2ux6_A 21 ASLKVAPGDTVTFIPTDKGHNVETIK-----GMIPDGAE-AFKSKINENYKVTFTAPGVYGVKCTP-HPF--MVGVVQVG 91 (122)
T ss_dssp SEEEECTTEEEEEEESSSSCCCEECT-----TCSCTTCC-CCBCCTTCCEEEEECSCEEEEEEETT-EEE--EEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCcEEEEcc-----cccCCCcc-eeecCCCCEEEEEeCCCEEEEEEeCC-Ccc--CEEEEEEe
Confidence 35788999999999987789998653 11111110 111 123357888999999999985 877 99999998
Q ss_pred cC
Q 038845 138 ET 139 (177)
Q Consensus 138 ~~ 139 (177)
+.
T Consensus 92 ~~ 93 (122)
T 2ux6_A 92 DA 93 (122)
T ss_dssp SS
T ss_pred CC
Confidence 53
No 24
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.10 E-value=6.1e-06 Score=62.56 Aligned_cols=72 Identities=11% Similarity=0.050 Sum_probs=47.1
Q ss_pred CCCceEeCCEEEEEEcCC-CceEEEEcccccccCcCCCccceeccCCceEEEecCCccEEEEeCCCCCcCCCeEEEEee
Q 038845 60 SHESFYVNDWLIFNFDKN-MYNVLEVNKTSYESCNDKGFIKNITKGGRDVFQLTEPRPYYFLSGRGFCWGGLKAAIFVQ 137 (177)
Q Consensus 60 ~~~~F~vGDtLvF~y~~~-~H~V~~V~~~~Y~~C~~~~~i~~~~~~G~~~v~L~~~G~~YFic~~~HC~~GmKl~I~V~ 137 (177)
+..+.++||++.|..+.. .|++...+...- .=..... ....+....++++++|.|.|.|.. |. ||+..|.|+
T Consensus 60 ~~i~V~~GdtV~~~N~d~~~H~v~~~~~~~g-~~~~~s~--~l~pG~t~~~tF~~~G~y~y~C~~-H~--gM~G~I~V~ 132 (132)
T 3c75_A 60 PEVTIKAGETVYWVNGEVMPHNVAFKKGIVG-EDAFRGE--MMTKDQAYAITFNEAGSYDYFCTP-HP--FMRGKVIVE 132 (132)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTSS-SSCEECC--CBCTTEEEEEEECSCEEEEEECSS-CT--TCEEEEEEC
T ss_pred CEEEECCCCEEEEEECCCCceEEEEeCCCCC-ccccccc--ccCCCCEEEEEcCCCEEEEEEeCC-Cc--CCEEEEEEC
Confidence 457889999999987654 699986542210 0000000 111222346788999999999985 65 999999884
No 25
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.06 E-value=5.4e-06 Score=59.29 Aligned_cols=68 Identities=7% Similarity=0.055 Sum_probs=45.8
Q ss_pred CCCceEeCCEEEEEEcCC---CceEEEEcccccccCcCCCccceeccCCc--eEEEecCCccEEEEeCCCCCcCCCeEEE
Q 038845 60 SHESFYVNDWLIFNFDKN---MYNVLEVNKTSYESCNDKGFIKNITKGGR--DVFQLTEPRPYYFLSGRGFCWGGLKAAI 134 (177)
Q Consensus 60 ~~~~F~vGDtLvF~y~~~---~H~V~~V~~~~Y~~C~~~~~i~~~~~~G~--~~v~L~~~G~~YFic~~~HC~~GmKl~I 134 (177)
+..++.+||++.|.+.+. .|++..-+ ... ......+.. -.++.+++|.|.|.|. .||..||+-.|
T Consensus 28 ~~i~v~~G~tV~~~~~n~d~~~H~~~~~~-~~~--------~~~~~pg~~~~~~~t~~~~G~Y~y~C~-~H~~~gM~G~i 97 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKGKSEHTFTIKK-LGI--------DVVVESGKEKNITVKPKSAGTYELICR-YHLLKGMEGKV 97 (100)
T ss_dssp SEEEECTTSCEEEEEEECSSSCEEEEEGG-GTE--------EEEECTTCEEEEEECCCSCEEEEEECT-TTGGGTCEEEE
T ss_pred CEEEECCCCEEEEEEEcCCCceEEEEEec-CCc--------ceeecCCcceeEEEecccCceEEEECc-cccCCCCEEEE
Confidence 358999999999987653 47765321 110 011111112 2456679999999996 69999999999
Q ss_pred Eee
Q 038845 135 FVQ 137 (177)
Q Consensus 135 ~V~ 137 (177)
.|+
T Consensus 98 ~Ve 100 (100)
T 4hci_A 98 IVK 100 (100)
T ss_dssp EEC
T ss_pred EEC
Confidence 985
No 26
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=98.06 E-value=1.6e-05 Score=56.36 Aligned_cols=90 Identities=13% Similarity=0.053 Sum_probs=57.3
Q ss_pred eEEEecCC-CCCCCCCCccccCCCCceEeCCEEEEEEcC-CCceEEEEcccccccCcCC-------CccceeccCCceEE
Q 038845 39 TLHRVGGK-LGWTPSVNFTEWSSHESFYVNDWLIFNFDK-NMYNVLEVNKTSYESCNDK-------GFIKNITKGGRDVF 109 (177)
Q Consensus 39 ~~~~VGg~-~GW~~~~~Y~~Wa~~~~F~vGDtLvF~y~~-~~H~V~~V~~~~Y~~C~~~-------~~i~~~~~~G~~~v 109 (177)
.++.+|.+ .+..+.+ ...+++.||++.|.... ..|++..-... ..+... ........+....+
T Consensus 3 ~~V~~~~~~~~~~f~p------~~i~v~~Gd~V~~~N~~~~~H~v~~~~~~--~~~~~g~~~~~~~~~~~~i~pG~~~~~ 74 (105)
T 3cvb_A 3 FTVKMGADSGLFQFEP------ANVTVHPGDTVKWVNNKLPPHNILFDDKQ--VPGASKELADKLSHSQLMFSPGESYEI 74 (105)
T ss_dssp EEEEESCTTCCSCEES------SEEEECTTEEEEEEECSSCCEEEEECTTS--SGGGCHHHHHHHCEEEEECSTTCEEEE
T ss_pred EEEEEeecCCccEEeC------CEEEEcCCCEEEEEECCCCCCeEEEeCCC--CCcccccccccccccccccCCCCeEEE
Confidence 45677654 4555543 34688999999998664 47998764321 112100 00001112223456
Q ss_pred Ee---cCCccEEEEeCCCCCcCCCeEEEEee
Q 038845 110 QL---TEPRPYYFLSGRGFCWGGLKAAIFVQ 137 (177)
Q Consensus 110 ~L---~~~G~~YFic~~~HC~~GmKl~I~V~ 137 (177)
++ +++|+|+|.|. .|++.||+..|.|.
T Consensus 75 ~f~~~~~~G~y~y~C~-~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 75 TFSSDFPAGTYTYYCA-PHRGAGMVGKITVE 104 (105)
T ss_dssp EECTTSCSEEEEEECT-TTGGGTCEEEEEEC
T ss_pred EEecCCCCeeEEEEeC-CchhcCCEEEEEEc
Confidence 67 78999999998 79999999999986
No 27
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=97.86 E-value=4.5e-05 Score=60.75 Aligned_cols=91 Identities=12% Similarity=0.110 Sum_probs=56.8
Q ss_pred eEEEecCCCCCCCCCCccccCCCCce-EeCCEEEEEEcC--C------CceEEEEcccccc---------------cCcC
Q 038845 39 TLHRVGGKLGWTPSVNFTEWSSHESF-YVNDWLIFNFDK--N------MYNVLEVNKTSYE---------------SCND 94 (177)
Q Consensus 39 ~~~~VGg~~GW~~~~~Y~~Wa~~~~F-~vGDtLvF~y~~--~------~H~V~~V~~~~Y~---------------~C~~ 94 (177)
.++.|+.+++..+.+ +..++ +.||++.|.+.+ + .|+++..+..+++ .=+.
T Consensus 43 ~~V~I~~~d~m~F~P------~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d 116 (167)
T 3ay2_A 43 CAATVESNDNMQFNT------KDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDD 116 (167)
T ss_dssp CEEEEEECTTSCBSC------SEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTC
T ss_pred eEEEEEeCCCceEec------ceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccc
Confidence 467787666777765 24555 669976666654 3 2999877543221 1011
Q ss_pred CCcc---ceeccCCc-eEEEec----CCccEEEEeC-CCCCcCCCeEEEEee
Q 038845 95 KGFI---KNITKGGR-DVFQLT----EPRPYYFLSG-RGFCWGGLKAAIFVQ 137 (177)
Q Consensus 95 ~~~i---~~~~~~G~-~~v~L~----~~G~~YFic~-~~HC~~GmKl~I~V~ 137 (177)
.+.+ ... .+|. ..++++ ++|.|+|+|. ++|=+ |||-.|.|.
T Consensus 117 ~~vl~~t~~l-~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 117 ARVVAHTKLI-GGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp TTEEEECCCB-CTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred cchhccceee-CCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 1111 011 1233 355554 7999999999 99988 999999996
No 28
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=97.85 E-value=0.00012 Score=55.59 Aligned_cols=90 Identities=17% Similarity=0.194 Sum_probs=56.5
Q ss_pred EEEecCCCCCCCCCCccccCCCCceEeC-CEEEEEEcCC--------CceEEEEcccc----------------cccCcC
Q 038845 40 LHRVGGKLGWTPSVNFTEWSSHESFYVN-DWLIFNFDKN--------MYNVLEVNKTS----------------YESCND 94 (177)
Q Consensus 40 ~~~VGg~~GW~~~~~Y~~Wa~~~~F~vG-DtLvF~y~~~--------~H~V~~V~~~~----------------Y~~C~~ 94 (177)
++.|+.+++..+.+ +..++..| |++.|.+.+. .|+++..+..+ |..=+.
T Consensus 4 ~v~i~~~d~m~F~p------~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~ 77 (129)
T 1cuo_A 4 ETTVTSGDTMTYST------RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGD 77 (129)
T ss_dssp EEEEEECSSSCCSC------SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTC
T ss_pred EEEEEeCCCceEcc------CeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhcccccccccccc
Confidence 56666666666665 35688999 9777776652 39998775432 211011
Q ss_pred CCcc---ceeccCCc-eEEEe--c---CCccEEEEeC-CCCCcCCCeEEEEee
Q 038845 95 KGFI---KNITKGGR-DVFQL--T---EPRPYYFLSG-RGFCWGGLKAAIFVQ 137 (177)
Q Consensus 95 ~~~i---~~~~~~G~-~~v~L--~---~~G~~YFic~-~~HC~~GmKl~I~V~ 137 (177)
.+-+ ... .+|. ..++. + ++|.|+|+|+ ++|=+ |||-.|.|.
T Consensus 78 ~~~~~~t~~l-~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 78 KRVIAFTPII-GGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp TTCSEECCCB-CTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred ccceeeeeEE-CCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 1111 111 1232 34444 3 8999999999 99999 999999986
No 29
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.72 E-value=7.2e-05 Score=54.21 Aligned_cols=72 Identities=11% Similarity=0.064 Sum_probs=46.9
Q ss_pred CCCceEeCCEEEEEEcCC-CceEEEEcccccccCcCCCccceeccCCceEEEecCCccEEEEeCCCCCcCCCeEEEEee
Q 038845 60 SHESFYVNDWLIFNFDKN-MYNVLEVNKTSYESCNDKGFIKNITKGGRDVFQLTEPRPYYFLSGRGFCWGGLKAAIFVQ 137 (177)
Q Consensus 60 ~~~~F~vGDtLvF~y~~~-~H~V~~V~~~~Y~~C~~~~~i~~~~~~G~~~v~L~~~G~~YFic~~~HC~~GmKl~I~V~ 137 (177)
+..+.++||++.|..... .|++...+... ..=..... ....+....++++++|.|.|.|.. |. ||+..|.|.
T Consensus 34 ~~i~V~~G~tV~~~N~d~~~H~v~~~~~~~-~~~~~~s~--~l~~g~~~~~tf~~~G~y~~~C~~-H~--~M~G~I~V~ 106 (106)
T 1id2_A 34 PEVTIKAGETVYWVNGEVMPHNVAFKKGIV-GEDAFRGE--MMTKDQAYAITFNEAGSYDYFCTP-HP--FMRGKVIVE 106 (106)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTS-SSSCEECC--CBCTTEEEEEEECSCEEEEEECSS-CT--TCEEEEEEC
T ss_pred CEEEECCCCEEEEEECCCCcEEEEEeCCCC-Cccccccc--ccCCCCEEEEEeCCCEEEEEEeCC-CC--CCEEEEEEC
Confidence 357899999999996654 69987643220 00000000 111222346788999999999985 76 999999884
No 30
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.68 E-value=8.9e-05 Score=53.45 Aligned_cols=68 Identities=15% Similarity=0.072 Sum_probs=46.3
Q ss_pred CCCceEeCCEEEEEEcCC-CceEEEEcccc----cccCcCCCccceeccCCceEEEecCCccEEEEeCCCCCcCCCeEEE
Q 038845 60 SHESFYVNDWLIFNFDKN-MYNVLEVNKTS----YESCNDKGFIKNITKGGRDVFQLTEPRPYYFLSGRGFCWGGLKAAI 134 (177)
Q Consensus 60 ~~~~F~vGDtLvF~y~~~-~H~V~~V~~~~----Y~~C~~~~~i~~~~~~G~~~v~L~~~G~~YFic~~~HC~~GmKl~I 134 (177)
...++++||++.|..... .|+|...+..+ |+.. ....+....++++++|.|+|.|.. |- ||+..|
T Consensus 33 ~~i~v~~Gd~V~~~N~d~~~H~v~~~~~~~g~~~~~~~-------~~~pG~~~~~tf~~~G~y~y~C~~-H~--gM~G~i 102 (105)
T 2ov0_A 33 PELHVKVGDTVTWINREAMPHNVHFVAGVLGEAALKGP-------MMKKEQAYSLTFTEAGTYDYHCTP-HP--FMRGKV 102 (105)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEECC-------CBCTTEEEEEEECSCEEEEEECSS-CT--TCEEEE
T ss_pred CEEEECCCCEEEEEECCCCCEEEEEcCCCCCccccccc-------ccCCCCEEEEEeCCCEEEEEEeCC-CC--CCEEEE
Confidence 357889999999987654 79987643210 2111 011222346788999999999984 43 999999
Q ss_pred Eee
Q 038845 135 FVQ 137 (177)
Q Consensus 135 ~V~ 137 (177)
.|.
T Consensus 103 ~V~ 105 (105)
T 2ov0_A 103 VVE 105 (105)
T ss_dssp EEC
T ss_pred EEC
Confidence 884
No 31
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.58 E-value=0.00068 Score=51.41 Aligned_cols=90 Identities=19% Similarity=0.211 Sum_probs=53.2
Q ss_pred EEEecCCCCCCCCCCccccCCCCce-EeCCEEEEEEcCC--------CceEEEEcccc----------------cccCcC
Q 038845 40 LHRVGGKLGWTPSVNFTEWSSHESF-YVNDWLIFNFDKN--------MYNVLEVNKTS----------------YESCND 94 (177)
Q Consensus 40 ~~~VGg~~GW~~~~~Y~~Wa~~~~F-~vGDtLvF~y~~~--------~H~V~~V~~~~----------------Y~~C~~ 94 (177)
++.|+.++++.+.++ ..++ ..||++.|.+.+. .|+++..+..+ |..=+.
T Consensus 3 ~v~v~~~d~m~F~p~------~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~ 76 (128)
T 2iaa_C 3 DVSIEGNDSMQFNTK------SIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGD 76 (128)
T ss_dssp EEEEEECTTSCBSCS------EEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTC
T ss_pred EEEEEeCCCceEecC------EEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhcccccccccccc
Confidence 456666666777652 2334 4499777776542 29998765332 211011
Q ss_pred CCcc---ceeccCCc-eEEEec----CCc-cEEEEeC-CCCCcCCCeEEEEee
Q 038845 95 KGFI---KNITKGGR-DVFQLT----EPR-PYYFLSG-RGFCWGGLKAAIFVQ 137 (177)
Q Consensus 95 ~~~i---~~~~~~G~-~~v~L~----~~G-~~YFic~-~~HC~~GmKl~I~V~ 137 (177)
.+-+ ... .+|. ..++++ ++| .|.|+|+ ++|=+ |||-.|.|.
T Consensus 77 ~~~~~~t~~l-~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 77 ERVIAHTSVI-GGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp TTEEEECCCB-CTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred chhhccceee-CCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 1111 011 2233 345554 678 5999999 99999 999999986
No 32
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=97.50 E-value=0.00088 Score=50.81 Aligned_cols=88 Identities=17% Similarity=0.241 Sum_probs=52.7
Q ss_pred EEEecCCCCCCCCCCccccCCCCceEe---CCEEEEEEcC--C------CceEEEEcccc----------------cccC
Q 038845 40 LHRVGGKLGWTPSVNFTEWSSHESFYV---NDWLIFNFDK--N------MYNVLEVNKTS----------------YESC 92 (177)
Q Consensus 40 ~~~VGg~~GW~~~~~Y~~Wa~~~~F~v---GDtLvF~y~~--~------~H~V~~V~~~~----------------Y~~C 92 (177)
++.|+.+++..+.+ .+|.| ||++.|.+.+ + .|+++..+..+ |..=
T Consensus 4 ~v~v~~~d~m~F~p--------~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (129)
T 2ccw_A 4 EATVESNDAMQYNV--------KEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKA 75 (129)
T ss_dssp EEEEEECTTSCBSC--------SEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCT
T ss_pred EEEEEeCCCccEec--------ceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhccccccccc
Confidence 56677666677654 45555 9977666654 2 29998775432 2110
Q ss_pred cCCCcc---ceeccCCc-eEEEe--c--CCcc-EEEEeC-CCCCcCCCeEEEEee
Q 038845 93 NDKGFI---KNITKGGR-DVFQL--T--EPRP-YYFLSG-RGFCWGGLKAAIFVQ 137 (177)
Q Consensus 93 ~~~~~i---~~~~~~G~-~~v~L--~--~~G~-~YFic~-~~HC~~GmKl~I~V~ 137 (177)
+..+-+ ... .+|. ..++. + ++|. |.|+|. ++|=+ |||-.|.|.
T Consensus 76 ~~~~~~~~t~~l-~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 76 GDTRVIAHTKVI-GGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp TCTTEEEECCCB-CTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred ccccceeeeeEE-CCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 111111 011 1232 34444 3 5655 999999 99988 999999986
No 33
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.46 E-value=0.00049 Score=52.21 Aligned_cols=90 Identities=12% Similarity=0.145 Sum_probs=54.3
Q ss_pred EEEecCCCCCCCCCCccccCCCCce-EeCCEEEEEEcCC--C------ceEEEEcccccc----------------cCcC
Q 038845 40 LHRVGGKLGWTPSVNFTEWSSHESF-YVNDWLIFNFDKN--M------YNVLEVNKTSYE----------------SCND 94 (177)
Q Consensus 40 ~~~VGg~~GW~~~~~Y~~Wa~~~~F-~vGDtLvF~y~~~--~------H~V~~V~~~~Y~----------------~C~~ 94 (177)
++.|+.++++.+.+ +..++ +.||++.|.+.+. . |+++..+..+.+ .=+.
T Consensus 4 ~v~v~~~d~m~F~p------~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~ 77 (128)
T 1nwp_A 4 KVTVDSTDQMSFNT------KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGD 77 (128)
T ss_dssp EEEEEECTTSCBSC------SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTC
T ss_pred EEEEEeCCCccEec------CEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhcccccccccccc
Confidence 56677666777765 24556 6799877777642 2 999876433221 0000
Q ss_pred CCccc---eeccCCc-eEEEec----CCcc-EEEEeC-CCCCcCCCeEEEEee
Q 038845 95 KGFIK---NITKGGR-DVFQLT----EPRP-YYFLSG-RGFCWGGLKAAIFVQ 137 (177)
Q Consensus 95 ~~~i~---~~~~~G~-~~v~L~----~~G~-~YFic~-~~HC~~GmKl~I~V~ 137 (177)
.+-+. .. .+|. ..++++ ++|. |.|+|+ ++|=+ |||-.|.|.
T Consensus 78 ~~~~~~t~~l-~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 78 ARVIAHTKVI-GAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp TTEEEECCCB-CTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred chhheeeeee-CCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 11010 11 1233 345544 5676 999999 99999 999999884
No 34
>1iko_P Ephrin-B2; greek KEY, glycosylation, signaling protein; HET: NAG MAN; 1.92A {Mus musculus} SCOP: b.6.1.5
Probab=97.34 E-value=0.00013 Score=58.97 Aligned_cols=78 Identities=23% Similarity=0.345 Sum_probs=50.5
Q ss_pred eEeCCEEEEE---EcC------CCceEEEEcccccccCcCCC-cccee--ccC-CceEEEec-------------CCc-c
Q 038845 64 FYVNDWLIFN---FDK------NMYNVLEVNKTSYESCNDKG-FIKNI--TKG-GRDVFQLT-------------EPR-P 116 (177)
Q Consensus 64 F~vGDtLvF~---y~~------~~H~V~~V~~~~Y~~C~~~~-~i~~~--~~~-G~~~v~L~-------------~~G-~ 116 (177)
.++||.|-|- |+. +.+.+++|++++|+.|+... +...+ ++. +...+++. ++| .
T Consensus 26 v~igD~LdIiCP~~~~~~~~~~E~~~LY~Vs~~~y~~C~~~~~~~~l~~C~~P~~~~kftikFq~fsP~p~GlEF~pg~~ 105 (178)
T 1iko_P 26 PQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCARPDQDVKFTIKFQEFSPNLWGLEFQKNKD 105 (178)
T ss_dssp CCTTCEEEEECCCCCSSSCSCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCCEEEEECCSSCSSTTCCCCCTTEE
T ss_pred ecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCCc
Confidence 3569999775 432 34889999999999998863 21111 111 22333331 355 6
Q ss_pred EEEEeC-C-----------CCCcC-CCeEEEEeecCCC
Q 038845 117 YYFLSG-R-----------GFCWG-GLKAAIFVQETAP 141 (177)
Q Consensus 117 ~YFic~-~-----------~HC~~-GmKl~I~V~~~~~ 141 (177)
|||||. . |+|.. +|||.|.|...+.
T Consensus 106 YY~IstS~G~~~gl~~~~gG~C~t~~Mkl~ikV~~~~~ 143 (178)
T 1iko_P 106 YYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGQDAS 143 (178)
T ss_dssp EEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETCC--
T ss_pred eEEEecCCcccccccccCCCccccceeEEEEEeecCCC
Confidence 999998 3 57966 8999999975443
No 35
>2x11_B Ephrin-A5; receptor-signaling protein complex, developmental protein, signaling platform, kinase, transferase, neurogenesis, receptor, cataract; 4.83A {Homo sapiens}
Probab=96.97 E-value=0.0011 Score=53.49 Aligned_cols=76 Identities=26% Similarity=0.498 Sum_probs=48.2
Q ss_pred CceEeCCEEEEE---EcC-------CCceEEEEcccccccCcCCCcc-cee--cc----CCceEEEec------------
Q 038845 62 ESFYVNDWLIFN---FDK-------NMYNVLEVNKTSYESCNDKGFI-KNI--TK----GGRDVFQLT------------ 112 (177)
Q Consensus 62 ~~F~vGDtLvF~---y~~-------~~H~V~~V~~~~Y~~C~~~~~i-~~~--~~----~G~~~v~L~------------ 112 (177)
...++||.|-+- |+. +...++.|++++|++|+..+.. ..+ ++ .|...+++.
T Consensus 52 i~V~i~D~LDIiCP~y~~~~~~~~~E~y~LY~Vs~e~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~FSP~p~G~E 131 (177)
T 2x11_B 52 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 131 (177)
T ss_dssp EEECTTCEEEEECCCCCSSSCSSSCCCEEEEEECHHHHHHTCCTTTEEEEEEECCTTCSSSSCEEEEECCSSCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCcEEEEeCCCCCCCCCeEEEEEEEEcCCCCCCcc
Confidence 557889999764 442 3577889999999999875432 111 11 123332211
Q ss_pred -CCc-cEEEEeC--CC----CCcCCCeEEEEeecCC
Q 038845 113 -EPR-PYYFLSG--RG----FCWGGLKAAIFVQETA 140 (177)
Q Consensus 113 -~~G-~~YFic~--~~----HC~~GmKl~I~V~~~~ 140 (177)
++| .||||+. ++ -| |||.|.|....
T Consensus 132 F~pG~~YYyISTS~~~~~g~~C---lrLkV~V~p~~ 164 (177)
T 2x11_B 132 FRPGREYFYISSAIPDNGRRSC---LKLKVFVRPTN 164 (177)
T ss_dssp CCTTEEEEEEEEESSCCCSSSC---CEEEEEECCTT
T ss_pred ccCCCeEEEEecCCCCCCCCcc---eEEEEEEEcCC
Confidence 455 5899986 22 35 99999998543
No 36
>3czu_B Ephrin-A1; ATP-binding, kinase, nucleotide-binding, receptor, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG MAN; 2.65A {Homo sapiens} PDB: 3mbw_B*
Probab=96.76 E-value=0.0038 Score=50.51 Aligned_cols=76 Identities=17% Similarity=0.360 Sum_probs=46.8
Q ss_pred CCceEeCCEEEEE---EcC--------CCceEEEEcccccccCcCCC-cccee--cc----CCceEEEec----------
Q 038845 61 HESFYVNDWLIFN---FDK--------NMYNVLEVNKTSYESCNDKG-FIKNI--TK----GGRDVFQLT---------- 112 (177)
Q Consensus 61 ~~~F~vGDtLvF~---y~~--------~~H~V~~V~~~~Y~~C~~~~-~i~~~--~~----~G~~~v~L~---------- 112 (177)
....++||.|-+- |+. +...++.|++++|++|+..+ +...+ ++ .|...+++.
T Consensus 49 ~i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~e~y~sC~~~~~~~~~~~C~~P~~~~~p~kftikFQ~FSP~p~G 128 (182)
T 3czu_B 49 TIHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQSKDQVRWQCNRPSAKHGPEKLSEKFQRFTPFTLG 128 (182)
T ss_dssp EEEECTTCEEEEECCCCC--CCCGGGSCCEEEEEECHHHHHHTCCCCGGGEEEEECCTTCTTSCCEEEEECCSCCSCTTS
T ss_pred eEEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhhhccCCCCCcEEEEeCCCCCCCCCcEEEEEEEEcCCCCCC
Confidence 3556889999764 432 24678899999999998763 21111 01 122222211
Q ss_pred ---CCc-cEEEEeC-C----CCCcCCCeEEEEeecC
Q 038845 113 ---EPR-PYYFLSG-R----GFCWGGLKAAIFVQET 139 (177)
Q Consensus 113 ---~~G-~~YFic~-~----~HC~~GmKl~I~V~~~ 139 (177)
++| .||||+. . +.| ||+.|.|...
T Consensus 129 lEF~pG~dYY~ISts~~~~gg~C---mrL~v~V~~k 161 (182)
T 3czu_B 129 KEFKEGHSYYYISKPIHQHEDRC---LRLKVTVSGK 161 (182)
T ss_dssp CCCCTTCEEEEEEEESSSCCCSC---CEEEEEECC-
T ss_pred eeEeCCCeEEEEEccCCCCCCcc---eEEEEEEecC
Confidence 455 5899997 2 345 9999999744
No 37
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=96.41 E-value=0.01 Score=42.62 Aligned_cols=67 Identities=9% Similarity=-0.034 Sum_probs=43.2
Q ss_pred CCCceEeCCEEEEEEcCC---CceEEEEcccccccCcCCCccceeccCCc-eEEE--ecCCccEEEEeCCCCCcC-CCeE
Q 038845 60 SHESFYVNDWLIFNFDKN---MYNVLEVNKTSYESCNDKGFIKNITKGGR-DVFQ--LTEPRPYYFLSGRGFCWG-GLKA 132 (177)
Q Consensus 60 ~~~~F~vGDtLvF~y~~~---~H~V~~V~~~~Y~~C~~~~~i~~~~~~G~-~~v~--L~~~G~~YFic~~~HC~~-GmKl 132 (177)
+..+++.||++.|.+.+. .|++..-+ .+ .. ... ..|. ..++ .+++|.|+|.|. -||.. +|+.
T Consensus 38 ~~i~v~~G~~V~~~~~n~d~~~H~~~i~~-~~-----~~---~~i-~pG~~~~~~f~~~~~G~y~~~C~-~~~~~~~M~g 106 (112)
T 1iby_A 38 ETLVVKKGDAVKVVVENKSPISEGFSIDA-FG-----VQ---EVI-KAGETKTISFTADKAGAFTIWCQ-LHPKNIHLPG 106 (112)
T ss_dssp CEEEEETTCEEEEEEEECSSSCEEEEEGG-GT-----EE---EEE-CTTCEEEEEEECCSCEEEEEBCS-SSCTTTBCCE
T ss_pred CEEEEeCCCEEEEEEEECCCCeEEEEEcC-CC-----ce---eEe-CCCCEEEEEEECCCCEEEEEECC-CCCchHHCEE
Confidence 357889999999987753 57765322 11 00 111 1233 2444 489999999997 46743 3999
Q ss_pred EEEee
Q 038845 133 AIFVQ 137 (177)
Q Consensus 133 ~I~V~ 137 (177)
.|.|.
T Consensus 107 ~i~V~ 111 (112)
T 1iby_A 107 TLNVV 111 (112)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99986
No 38
>1shx_A Ephrin-A5; ephrin signaling, hormone-growth factor complex; HET: NAG; 2.10A {Mus musculus} SCOP: b.6.1.5 PDB: 1shw_A* 3mx0_B*
Probab=96.39 E-value=0.0085 Score=46.41 Aligned_cols=75 Identities=27% Similarity=0.483 Sum_probs=47.2
Q ss_pred CceEeCCEEEEE---EcC-------CCceEEEEcccccccCcCCCcc-cee--ccC----CceEEEec------------
Q 038845 62 ESFYVNDWLIFN---FDK-------NMYNVLEVNKTSYESCNDKGFI-KNI--TKG----GRDVFQLT------------ 112 (177)
Q Consensus 62 ~~F~vGDtLvF~---y~~-------~~H~V~~V~~~~Y~~C~~~~~i-~~~--~~~----G~~~v~L~------------ 112 (177)
...++||.|-+- |+. +...++.|++++|++|+..... ..+ ++. +...+++.
T Consensus 23 i~V~i~D~lDIiCP~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFq~fsP~p~G~E 102 (138)
T 1shx_A 23 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 102 (138)
T ss_dssp EEECTTCEEEEECCCCCTTCCSTTCCCEEEEEECHHHHHTTCSSSSEEEEEEECCTTCTTSSCEEEEECCSCCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEEcCCCCCcee
Confidence 457789999664 442 3567889999999999875422 112 111 23232211
Q ss_pred -CCc-cEEEEeC-CC-----CCcCCCeEEEEeecC
Q 038845 113 -EPR-PYYFLSG-RG-----FCWGGLKAAIFVQET 139 (177)
Q Consensus 113 -~~G-~~YFic~-~~-----HC~~GmKl~I~V~~~ 139 (177)
++| .||||+. .+ -| |||.|.|...
T Consensus 103 F~pG~~YY~ISts~~~~~g~~C---lrL~V~V~p~ 134 (138)
T 1shx_A 103 FRPGREYFYISSAIPDNGRRSC---LKLKVFVRPT 134 (138)
T ss_dssp CCTTEEEEEEEEESSCCSCSCC---CEEEEEECCT
T ss_pred ecCCCeEEEEEcCCCCCCCCce---eEEEEEEEcc
Confidence 456 5899986 22 35 9999999844
No 39
>3d12_B Ephrin-B3; beta propeller, protein-receptor complex, envelope protein, glycoprotein, hemagglutinin, hydrolase, membrane, signal-AN transmembrane; HET: NAG BMA MAN BGC LXZ NGA GL0 GLC LXB NGZ GXL; 3.00A {Mus musculus}
Probab=96.14 E-value=0.01 Score=46.09 Aligned_cols=75 Identities=19% Similarity=0.268 Sum_probs=47.4
Q ss_pred ceEeCCEEEEE---EcC---------CCceEEEEcccccccCcCC-Cccceec--cC-CceEEEe----------c---C
Q 038845 63 SFYVNDWLIFN---FDK---------NMYNVLEVNKTSYESCNDK-GFIKNIT--KG-GRDVFQL----------T---E 113 (177)
Q Consensus 63 ~F~vGDtLvF~---y~~---------~~H~V~~V~~~~Y~~C~~~-~~i~~~~--~~-G~~~v~L----------~---~ 113 (177)
..++||.|-+- |+. ....++.|++++|++|+.. ++-..+. +. +...+++ . +
T Consensus 23 ~V~i~D~ldIiCP~~~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~p~G~EF~ 102 (141)
T 3d12_B 23 YPQIGDRLDLLCPRARPPGPHSSPSYEFYKLYLVEGAQGRRCEAPPAPNLLLTCDRPDLDLRFTIKFQEYSPNLWGHEFR 102 (141)
T ss_dssp CCCTTCEEEEEECCCSSCCTTCCSSCCCCEEEEECSHHHHTTBCCSSCEEEEECCCSSSCEEEEEESSSCCSCCSCCCCC
T ss_pred EecCCCEEEEECCCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCeEEEEeCCCCCCeEEEEEEEEcCCCCCceeee
Confidence 56778999764 432 3567899999999999885 2221121 11 2222211 1 4
Q ss_pred Cc-cEEEEeC-C-----------CCCcC-CCeEEEEee
Q 038845 114 PR-PYYFLSG-R-----------GFCWG-GLKAAIFVQ 137 (177)
Q Consensus 114 ~G-~~YFic~-~-----------~HC~~-GmKl~I~V~ 137 (177)
+| .||||+. . |-|.. .||+.|.|.
T Consensus 103 pG~~YY~ISts~G~~~gl~~~~gG~C~t~~Mkl~i~V~ 140 (141)
T 3d12_B 103 SHHDYYIIATSDGTREGLESLQGGVCLTRGMKVLLRVG 140 (141)
T ss_dssp TTCEEEEEECSCSSTTTTTCCBCSHHHHTCCEEEEECC
T ss_pred CCCeEEEEecCCCCcccccccCCCccccceEEEEEEec
Confidence 55 5899997 3 25855 899999985
No 40
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.11 E-value=0.024 Score=43.05 Aligned_cols=67 Identities=13% Similarity=0.222 Sum_probs=44.9
Q ss_pred CCCceEeCCEEEEEEcCC--CceEEEEcccccccCcCCCccceeccCCc---eEEEecCCccEEEEeCCCCCc---CCCe
Q 038845 60 SHESFYVNDWLIFNFDKN--MYNVLEVNKTSYESCNDKGFIKNITKGGR---DVFQLTEPRPYYFLSGRGFCW---GGLK 131 (177)
Q Consensus 60 ~~~~F~vGDtLvF~y~~~--~H~V~~V~~~~Y~~C~~~~~i~~~~~~G~---~~v~L~~~G~~YFic~~~HC~---~GmK 131 (177)
+...+.+||++.|..++. .|++..-+ .+ ++.....|. ..++.+++|.|+|.|. .+|- .+|+
T Consensus 60 ~~l~Vp~G~~V~~~vts~DV~Hsf~ip~-~~---------~k~d~~PG~~~~~~~~~~~~G~y~~~C~-e~CG~~H~~M~ 128 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPDVIHGFHVEG-TN---------INVEVLPGEVSTVRYTFKRPGEYRIICN-QYCGLGHQNMF 128 (135)
T ss_dssp SSEEEETTSEEEEEEEBSSSCEEEEETT-SS---------CEEEECBTBCEEEEEECCSCEEEEEECC-SCCSTTSTTCE
T ss_pred CEEEEcCCCEEEEEEEeCCccceEEecC-CC---------ceeEeCCCCcEEEEEEcCCCEEEEEECc-ccCCCCcCCCE
Confidence 357899999999999763 47765311 11 111111232 3678899999999996 2343 6899
Q ss_pred EEEEee
Q 038845 132 AAIFVQ 137 (177)
Q Consensus 132 l~I~V~ 137 (177)
..|.|.
T Consensus 129 g~v~V~ 134 (135)
T 2cua_A 129 GTIVVK 134 (135)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999986
No 41
>2vsm_B Ephrin-B2; developmental protein, henipavirus, neurogenesis, glycoprotein, paramyxovirus, envelope protein, cell surface receptor, hendra, virion; HET: NAG; 1.80A {Homo sapiens} PDB: 2wo2_B* 2i85_A 3gxu_B 2vsk_B 2hle_B 1kgy_E
Probab=95.69 E-value=0.013 Score=45.47 Aligned_cols=74 Identities=24% Similarity=0.342 Sum_probs=46.5
Q ss_pred eEeCCEEEEE---EcC------CCceEEEEcccccccCcCCC-cccee--ccC-CceEEEec-------------CCc-c
Q 038845 64 FYVNDWLIFN---FDK------NMYNVLEVNKTSYESCNDKG-FIKNI--TKG-GRDVFQLT-------------EPR-P 116 (177)
Q Consensus 64 F~vGDtLvF~---y~~------~~H~V~~V~~~~Y~~C~~~~-~i~~~--~~~-G~~~v~L~-------------~~G-~ 116 (177)
.++||.|-+- |+. ....++.|++++|+.|+... +...+ .+. +...+++. ++| .
T Consensus 25 v~i~D~ldIiCP~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~~~G~eF~~g~~ 104 (140)
T 2vsm_B 25 PQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCAKPDQDIKFTIKFQEFSPNLWGLEFQKNKD 104 (140)
T ss_dssp CCTTCEEEEEECCCC---CCCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCEEEEEESSSCCSCSSCCCCCTTEE
T ss_pred ecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCCc
Confidence 3568999775 322 25788999999999998763 21111 111 22322221 455 5
Q ss_pred EEEEeC-C-----------CCCcC-CCeEEEEee
Q 038845 117 YYFLSG-R-----------GFCWG-GLKAAIFVQ 137 (177)
Q Consensus 117 ~YFic~-~-----------~HC~~-GmKl~I~V~ 137 (177)
||||+. . |-|.. .||+.|.|.
T Consensus 105 YY~Ists~g~~~gl~~~~gG~C~t~~mkl~i~V~ 138 (140)
T 2vsm_B 105 YYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVG 138 (140)
T ss_dssp EEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEET
T ss_pred eEEEecCCCCccccccccCCccccceEEEEEEec
Confidence 899987 3 25855 899999996
No 42
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=95.35 E-value=0.23 Score=37.60 Aligned_cols=87 Identities=14% Similarity=0.210 Sum_probs=48.5
Q ss_pred EEEecCCCCCCCCCCccccCCCCceEe---CCEEEEEEcCC--------CceEEEEcccccc----------------cC
Q 038845 40 LHRVGGKLGWTPSVNFTEWSSHESFYV---NDWLIFNFDKN--------MYNVLEVNKTSYE----------------SC 92 (177)
Q Consensus 40 ~~~VGg~~GW~~~~~Y~~Wa~~~~F~v---GDtLvF~y~~~--------~H~V~~V~~~~Y~----------------~C 92 (177)
++.|-.+++..+.+ +.|.| |+++.|.+.+. .||++..+..+.+ .=
T Consensus 4 ~v~i~~~d~M~F~p--------~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~ 75 (125)
T 3fsa_A 4 SVDIQGNDQMQFNT--------NAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKP 75 (125)
T ss_dssp EEEEEBCTTSCBSC--------SEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCT
T ss_pred EEEEEccCCcEEec--------CEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCC
Confidence 34454455566654 34544 99998888763 3999987432211 10
Q ss_pred cCCCccce--eccCCc-eEEEec-----CCccEEEEeCCCCCcCCCeEEEEee
Q 038845 93 NDKGFIKN--ITKGGR-DVFQLT-----EPRPYYFLSGRGFCWGGLKAAIFVQ 137 (177)
Q Consensus 93 ~~~~~i~~--~~~~G~-~~v~L~-----~~G~~YFic~~~HC~~GmKl~I~V~ 137 (177)
+..+-+.. .-.+|. ..++.+ ++|.|-|+|+ +|= |||-.|.|.
T Consensus 76 ~d~~via~t~~l~pGes~~vtf~~~~l~~~G~y~f~C~-gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 76 DDSRVIAHTKLIGSGEKDSVTFDVSKLKEGEQYMFFCA-AHA--AMKGTLTLK 125 (125)
T ss_dssp TCTTCCEECCCBCTTCEEEEEEEGGGC---CCEEEECS-SST--TCEEEEEEC
T ss_pred CCccceeccceeCCCcEEEEEEeCcCcCCCccEEEEcC-CCC--CcEEEEEEC
Confidence 00111110 012233 344444 6799999998 776 999999873
No 43
>2wo3_B Ephrin-A2; transferase-signaling protein complex, EFN, EPHA4, KINA ephrin, complex, membrane, cell surface receptor, tyrosine- kinase, glycoprotein; HET: NAG; 2.35A {Homo sapiens}
Probab=95.20 E-value=0.049 Score=43.00 Aligned_cols=35 Identities=23% Similarity=0.411 Sum_probs=26.1
Q ss_pred CceEeCCEEEEE---Ec--------CCCceEEEEcccccccCcCCC
Q 038845 62 ESFYVNDWLIFN---FD--------KNMYNVLEVNKTSYESCNDKG 96 (177)
Q Consensus 62 ~~F~vGDtLvF~---y~--------~~~H~V~~V~~~~Y~~C~~~~ 96 (177)
...++||.|-+- |+ .....++.|++++|++|+...
T Consensus 32 i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~ 77 (157)
T 2wo3_B 32 VEVSINDYLDIYCPHYGAPLPPAERMEHYVLYMVNGEGHASCDHRQ 77 (157)
T ss_dssp EEECTTCEEEEECCCCCSSCCCGGGSCCEEEEEECHHHHHHTCCTT
T ss_pred EEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhccccCCC
Confidence 447789999775 43 224568899999999998864
No 44
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=94.36 E-value=0.14 Score=40.44 Aligned_cols=68 Identities=13% Similarity=0.160 Sum_probs=43.8
Q ss_pred CCCceEeCCEEEEEEcCC--CceEEEEcccccccCcCCCccceeccCCc---eEEEecCCccEEEEeC--CCCCcCCCeE
Q 038845 60 SHESFYVNDWLIFNFDKN--MYNVLEVNKTSYESCNDKGFIKNITKGGR---DVFQLTEPRPYYFLSG--RGFCWGGLKA 132 (177)
Q Consensus 60 ~~~~F~vGDtLvF~y~~~--~H~V~~V~~~~Y~~C~~~~~i~~~~~~G~---~~v~L~~~G~~YFic~--~~HC~~GmKl 132 (177)
+...+.+|+.+.|..++. .|+...-+ . .++.....|. ..++.+++|.||+.|+ -|+-..+|+.
T Consensus 93 n~l~VP~G~~Vr~~vTS~DViHsf~IP~-l---------gik~da~PG~~n~~~~~~~kpG~y~g~Cse~CG~~Hs~M~g 162 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSPDVIHGFHVEG-T---------NINVEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGHQNMFG 162 (168)
T ss_dssp SSEEEETTSEEEEEEECSSSCEEEEETT-S---------SCEEEECTTBCEEEEEECCSCEEEEEECCSCCSTTGGGCEE
T ss_pred CEEEEeCCCeEEEEEecCCceEEEEECC-C---------CeEEEecCCceeEEEEEeCCCEEEEEECCcCCCCCcCCCEE
Confidence 456788899999988763 45554311 1 1111111233 3578889999999997 2444456999
Q ss_pred EEEee
Q 038845 133 AIFVQ 137 (177)
Q Consensus 133 ~I~V~ 137 (177)
.|.|.
T Consensus 163 ~V~V~ 167 (168)
T 3s8f_B 163 TIVVK 167 (168)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99986
No 45
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=93.08 E-value=0.13 Score=44.96 Aligned_cols=77 Identities=9% Similarity=0.055 Sum_probs=50.5
Q ss_pred CCCceEeCCEEEEEEcCC---CceEEEEcccccccCcCCCccceeccCCceEEEecCCccEEEEeC-CCCCcCCCeEEEE
Q 038845 60 SHESFYVNDWLIFNFDKN---MYNVLEVNKTSYESCNDKGFIKNITKGGRDVFQLTEPRPYYFLSG-RGFCWGGLKAAIF 135 (177)
Q Consensus 60 ~~~~F~vGDtLvF~y~~~---~H~V~~V~~~~Y~~C~~~~~i~~~~~~G~~~v~L~~~G~~YFic~-~~HC~~GmKl~I~ 135 (177)
...+++.||++.|++.+. .|++..-.......|.. ....+ -.-.++.+++|+|+|.|. ++|=..||+..|.
T Consensus 55 p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~~~~~~i----~pG~~-~~~~f~~~~~Gt~~y~~~~~~h~~~Gm~G~i~ 129 (447)
T 2dv6_A 55 PTLVVHEGETVQVNLVNGEGAQHDVVVDQYAARSAIVN----GKNAS-STFSFVASKVGEFNYYCSIAGHRQAGMEGNIQ 129 (447)
T ss_dssp CCEEEETTCEEEEEEECSSSSCBCCEETTTTEECCCBC----STTBE-EEEEEECCSCEEEEEECCSTTHHHHTCEEEEE
T ss_pred CeEEEcCCCEEEEEEEcCCCCceEEEEccCCcccceec----CCCCe-EEEEEEcCCCEEEEEEeCCCChhhCCCEEEEE
Confidence 457889999999988763 37764322222222322 11000 112466688999999999 7888889999999
Q ss_pred eecCCC
Q 038845 136 VQETAP 141 (177)
Q Consensus 136 V~~~~~ 141 (177)
|..+.+
T Consensus 130 V~~~~~ 135 (447)
T 2dv6_A 130 VLPGNR 135 (447)
T ss_dssp EESSCC
T ss_pred EeCCcc
Confidence 986543
No 46
>3hei_B Ephrin-A1; EPH receptor tyrosine kinase, cell membrane, disulfi glycoprotein, GPI-anchor, lipoprotein, membrane, ATP-bindin kinase; 2.00A {Homo sapiens} SCOP: b.6.1.0
Probab=91.94 E-value=0.27 Score=37.64 Aligned_cols=76 Identities=16% Similarity=0.302 Sum_probs=44.7
Q ss_pred CceEeCCEEEE---EEcC--------CCceEEEEcccccccCcCCC-ccceec--c----CCceEEEec-----------
Q 038845 62 ESFYVNDWLIF---NFDK--------NMYNVLEVNKTSYESCNDKG-FIKNIT--K----GGRDVFQLT----------- 112 (177)
Q Consensus 62 ~~F~vGDtLvF---~y~~--------~~H~V~~V~~~~Y~~C~~~~-~i~~~~--~----~G~~~v~L~----------- 112 (177)
...++||.|-+ +|+. +...++.|++++|++|+..+ +...+. + .|...+++.
T Consensus 22 v~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~~~~kft~kFQ~FSP~p~G~ 101 (132)
T 3hei_B 22 IHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQSKDQVRWQCNRPSAKHGPEKLSEKFQRFTPFTLGK 101 (132)
T ss_dssp EEECTTCEEEEECCCCCTTSSCGGGCCCEEEEEECHHHHHHTCCSCGGGEEEEECCTTCTTSCCEEEEECCSCCSCTTSC
T ss_pred EEeCCCCeEEEECCCCCCCCCCCCCccEEEEEEeCHHHhccccCCCCCcEEEEeCCCCCCCCceEEEEEEEEcCCCCCCe
Confidence 44678999866 3432 34678899999999999764 222221 1 123332211
Q ss_pred --CCc-cEEEEeCC--CCCcCCCeEEEEee
Q 038845 113 --EPR-PYYFLSGR--GFCWGGLKAAIFVQ 137 (177)
Q Consensus 113 --~~G-~~YFic~~--~HC~~GmKl~I~V~ 137 (177)
++| .|||||.+ .|=..=+||.|.|.
T Consensus 102 EF~pG~~YY~ISt~~~~~~~~cl~l~v~v~ 131 (132)
T 3hei_B 102 EFKEGHSYYYISKPIHQHEDRCLRLKVTVK 131 (132)
T ss_dssp CCCTTCEEEEEEEESSCCCCSCCEEEEEEC
T ss_pred eecCCCcEEEEEccCCCCCCcceEEEEEEE
Confidence 455 58999983 22122278888774
No 47
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.11 E-value=0.56 Score=44.16 Aligned_cols=68 Identities=12% Similarity=0.140 Sum_probs=45.3
Q ss_pred CCCceEeCCEEEEEEcCC------CceEEEEcccccccCcCCCccceeccCCc---eEEEecCCccEEEEeCCCCCcC--
Q 038845 60 SHESFYVNDWLIFNFDKN------MYNVLEVNKTSYESCNDKGFIKNITKGGR---DVFQLTEPRPYYFLSGRGFCWG-- 128 (177)
Q Consensus 60 ~~~~F~vGDtLvF~y~~~------~H~V~~V~~~~Y~~C~~~~~i~~~~~~G~---~~v~L~~~G~~YFic~~~HC~~-- 128 (177)
+..++.+||++.|..++. .|+...-+ . .++.....|. ..++.+++|.|||.|+ .+|-.
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPs-l---------GIK~DaiPGrtnsvtFtadkPGvY~y~CS-E~CGa~H 626 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVN-H---------GVSMEISPQQTSSITFVADKPGLHWYYCS-WFCHALH 626 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETT-T---------TEEEEECTTCEEEEEEECCSCEEEEEECC-SCCSTTC
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecC-C---------CceeeeCCCCeEEEEEEcCCCEEEEEECC-CcCCCCc
Confidence 357889999999988762 57765421 1 1111111233 3577789999999997 35654
Q ss_pred -CCeEEEEeec
Q 038845 129 -GLKAAIFVQE 138 (177)
Q Consensus 129 -GmKl~I~V~~ 138 (177)
+|+..|.|++
T Consensus 627 s~M~G~ViVEP 637 (638)
T 3sbq_A 627 MEMVGRMMVEP 637 (638)
T ss_dssp TTCEEEEEEEC
T ss_pred ccceEEEEEec
Confidence 4999999973
No 48
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=90.52 E-value=0.66 Score=43.29 Aligned_cols=66 Identities=9% Similarity=0.027 Sum_probs=44.0
Q ss_pred CCceEeCCEEEEEEcCC------CceEEEEcccccccCcCCCccceeccCCc---eEEEecCCccEEEEeC----CCCCc
Q 038845 61 HESFYVNDWLIFNFDKN------MYNVLEVNKTSYESCNDKGFIKNITKGGR---DVFQLTEPRPYYFLSG----RGFCW 127 (177)
Q Consensus 61 ~~~F~vGDtLvF~y~~~------~H~V~~V~~~~Y~~C~~~~~i~~~~~~G~---~~v~L~~~G~~YFic~----~~HC~ 127 (177)
..++..||++.|...+. .|++..-+ .+ +......|. ..++.+++|.|||.|. ..|
T Consensus 514 ~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~-~g---------v~~~i~PG~t~t~~Fta~~pGtY~yhC~e~Cg~~H-- 581 (595)
T 1fwx_A 514 SFTVKEGDEVTVIVTNLDEIDDLTHGFTMGN-YG---------VAMEIGPQMTSSVTFVAANPGVYWYYCQWFCHALH-- 581 (595)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETT-TT---------EEEEECTTCEEEEEEECCSCEEEEEECCSCCSTTC--
T ss_pred EEEEECCCEEEEEEEeCCCCCCceeeEEecC-CC---------cceeeCCCCeEEEEEECCCCEEEEEECCCCCCCCc--
Confidence 46788999999998762 47765322 11 111111232 3577889999999997 245
Q ss_pred CCCeEEEEeec
Q 038845 128 GGLKAAIFVQE 138 (177)
Q Consensus 128 ~GmKl~I~V~~ 138 (177)
.||+..|.|.+
T Consensus 582 ~gM~G~IiV~p 592 (595)
T 1fwx_A 582 MEMRGRMLVEP 592 (595)
T ss_dssp TTCEEEEEEEC
T ss_pred cCCEEEEEEEc
Confidence 49999999984
No 49
>3iuw_A Activating signal cointegrator; NP_814290.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.58A {Enterococcus faecalis V583}
Probab=70.35 E-value=1.9 Score=30.38 Aligned_cols=16 Identities=31% Similarity=0.573 Sum_probs=12.6
Q ss_pred CceEeCCEEEEE-EcCC
Q 038845 62 ESFYVNDWLIFN-FDKN 77 (177)
Q Consensus 62 ~~F~vGDtLvF~-y~~~ 77 (177)
+.|++||.|+|+ |+++
T Consensus 36 r~~~vGD~l~l~E~~~g 52 (83)
T 3iuw_A 36 RNFQVGDILILEEYMNG 52 (83)
T ss_dssp SCCCTTCEEEEEEEETT
T ss_pred cCCCCCCEEEEEEccCC
Confidence 569999999995 6543
No 50
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=69.77 E-value=32 Score=29.38 Aligned_cols=66 Identities=18% Similarity=0.152 Sum_probs=42.2
Q ss_pred CCceEeCCEEEEEEcCC--CceEEEEcccccccCcCCCccceeccCCc---eEEEecCCccEEEEeCCCCCcC---CCeE
Q 038845 61 HESFYVNDWLIFNFDKN--MYNVLEVNKTSYESCNDKGFIKNITKGGR---DVFQLTEPRPYYFLSGRGFCWG---GLKA 132 (177)
Q Consensus 61 ~~~F~vGDtLvF~y~~~--~H~V~~V~~~~Y~~C~~~~~i~~~~~~G~---~~v~L~~~G~~YFic~~~HC~~---GmKl 132 (177)
.-.+.+|..+.|.-++. -|+...-+ - .++...-.|. ..++.+++|.||..|+ ..|-. .|++
T Consensus 152 ~l~lP~g~~V~~~lTS~DViHsf~IP~-l---------g~k~DaiPGr~n~~~~~~~~~G~y~g~Cs-E~CG~~Hs~M~~ 220 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSNSVMNSFFIPR-L---------GSQIYAMAGMQTRLHLIANEPGTYDGISA-SYSGPGFSGMKF 220 (315)
T ss_dssp BCCCCSSSEEEEEECBSSSCEEEEEGG-G---------TEEEEECBTSCEEEEEECCSCBCCEEBCC-SCCSTTTTTCCE
T ss_pred eEEEeCCCEEEEEEEeCCccceeeecc-c---------CcEEeecCCcceeeEEecCCCeEEEEecc-ccchhhHHhccc
Confidence 45678899999998864 34443211 0 1111111233 3577889999999997 46655 4999
Q ss_pred EEEee
Q 038845 133 AIFVQ 137 (177)
Q Consensus 133 ~I~V~ 137 (177)
.|.|.
T Consensus 221 ~v~vv 225 (315)
T 1fft_B 221 KAIAT 225 (315)
T ss_dssp ECCBC
T ss_pred eEEEe
Confidence 99988
No 51
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=69.30 E-value=11 Score=31.48 Aligned_cols=74 Identities=16% Similarity=0.167 Sum_probs=45.2
Q ss_pred CceEeCCEEEEEEcCC-----CceEEEEcccccccCcCCCccceeccCCce---EEEecCCccEEEEeC-CC-----CCc
Q 038845 62 ESFYVNDWLIFNFDKN-----MYNVLEVNKTSYESCNDKGFIKNITKGGRD---VFQLTEPRPYYFLSG-RG-----FCW 127 (177)
Q Consensus 62 ~~F~vGDtLvF~y~~~-----~H~V~~V~~~~Y~~C~~~~~i~~~~~~G~~---~v~L~~~G~~YFic~-~~-----HC~ 127 (177)
.+++.||+|.+++.+. -|.+..-...+.+.- .++... ..|.. .++.+++|++||-|- .+ |=.
T Consensus 66 i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~~~~~~---~~~~~i-~PG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~ 141 (333)
T 1mzy_A 66 MIVHEGDYVELTLINPPENTMPHNIDFHAATGALGG---GGLTLI-NPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVV 141 (333)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGGG---GGGCCB-CTTEEEEEEEECCSCEEEEEECCCSTTHHHHHHH
T ss_pred EEecCCCEEEEEEEECCCCcccccceecCCCCCCCC---CceeEe-CCCCEEEEEEECCCCEEEEEeecCCcccchhhhh
Confidence 5678999999998874 255543211111100 111111 12332 567788999999997 42 667
Q ss_pred CCCeEEEEeecC
Q 038845 128 GGLKAAIFVQET 139 (177)
Q Consensus 128 ~GmKl~I~V~~~ 139 (177)
.||.-.+.|.+.
T Consensus 142 ~Gl~G~~iV~~~ 153 (333)
T 1mzy_A 142 SGMAGCIMVLPR 153 (333)
T ss_dssp TTCEEEEEEECT
T ss_pred CCCEEEEEEccC
Confidence 899999999743
No 52
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=68.39 E-value=11 Score=31.44 Aligned_cols=75 Identities=13% Similarity=0.169 Sum_probs=45.2
Q ss_pred CCceEeCCEEEEEEcCC-----CceEEEEcccccccCcCCCccceeccCCce---EEEecCCccEEEEeC-CC----CCc
Q 038845 61 HESFYVNDWLIFNFDKN-----MYNVLEVNKTSYESCNDKGFIKNITKGGRD---VFQLTEPRPYYFLSG-RG----FCW 127 (177)
Q Consensus 61 ~~~F~vGDtLvF~y~~~-----~H~V~~V~~~~Y~~C~~~~~i~~~~~~G~~---~v~L~~~G~~YFic~-~~----HC~ 127 (177)
..+++.||++.+++.+. .|++..=... +. +-.++.... ..|.+ .++.+++|++||-|- .+ |=.
T Consensus 66 ~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~-~~--~~~~~~~~i-~pG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~ 141 (336)
T 1oe1_A 66 TLVVHEGDYVQLTLVNPATNAMPHNVDFHGAT-GA--LGGAKLTNV-NPGEQATLRFKADRSGTFVYHCAPEGMVPWHVV 141 (336)
T ss_dssp CEEEETTCEEEEEEEECTTCCSCBCCEETTSC-SG--GGGGGGCCB-CTTEEEEEEEECCSCEEEEEECCCTTCHHHHHH
T ss_pred eEEEcCCCEEEEEEEcCCCCCccccceECCCC-CC--CCCcceEEe-CCCCEEEEEEECCCCeEEEEecCCCCchhHHHh
Confidence 35678999999988873 4665432111 00 000111111 12332 466788999999997 32 456
Q ss_pred CCCeEEEEeecC
Q 038845 128 GGLKAAIFVQET 139 (177)
Q Consensus 128 ~GmKl~I~V~~~ 139 (177)
.||.-.+.|...
T Consensus 142 ~Gl~G~liV~~~ 153 (336)
T 1oe1_A 142 SGMSGTLMVLPR 153 (336)
T ss_dssp TTCEEEEEEECT
T ss_pred CCCeEEEEEecC
Confidence 899999999853
No 53
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=62.73 E-value=7.7 Score=33.62 Aligned_cols=76 Identities=17% Similarity=0.144 Sum_probs=44.6
Q ss_pred CCceEeCCEEEEEEcCC-----CceEEEEcccccccCcCCCcc-ceeccCCce--EEEecCCccEEEEeC----CCCCcC
Q 038845 61 HESFYVNDWLIFNFDKN-----MYNVLEVNKTSYESCNDKGFI-KNITKGGRD--VFQLTEPRPYYFLSG----RGFCWG 128 (177)
Q Consensus 61 ~~~F~vGDtLvF~y~~~-----~H~V~~V~~~~Y~~C~~~~~i-~~~~~~G~~--~v~L~~~G~~YFic~----~~HC~~ 128 (177)
..+++.||++++++.+. .|++..=.....+. .+. ....-++.. .++.+++|++||-|- ..|=..
T Consensus 61 ~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~~dG----~~~~~~i~pg~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~ 136 (442)
T 2zoo_A 61 FIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTGPGG----GAESSFTAPGHTSTFNFKALNPGLYIYHCATAPVGMHIAN 136 (442)
T ss_dssp BEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGG----GGGGCCBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHT
T ss_pred cEEEeCCCEEEEEEEECCCCCCCCCEEecCCcCCCC----CCccEEECCCCEEEEEEEcCCCeEEEEecCCCChHHHHhC
Confidence 35678999999988764 35543211000000 010 001112222 466778999999993 346678
Q ss_pred CCeEEEEeecCC
Q 038845 129 GLKAAIFVQETA 140 (177)
Q Consensus 129 GmKl~I~V~~~~ 140 (177)
||...+.|....
T Consensus 137 Gl~G~~iv~~~~ 148 (442)
T 2zoo_A 137 GMYGLILVEPKE 148 (442)
T ss_dssp TCEEEEEEECTT
T ss_pred ccEEEEEEeCCC
Confidence 999999998543
No 54
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=62.40 E-value=62 Score=26.72 Aligned_cols=30 Identities=10% Similarity=0.150 Sum_probs=24.5
Q ss_pred EEEecCCccEEEEeCCCCCcCC---CeEEEEeec
Q 038845 108 VFQLTEPRPYYFLSGRGFCWGG---LKAAIFVQE 138 (177)
Q Consensus 108 ~v~L~~~G~~YFic~~~HC~~G---mKl~I~V~~ 138 (177)
.++.+++|.||..|+ ..|-.| |++.|.|.+
T Consensus 214 ~~~~~~~G~y~g~Cs-e~CG~~H~~M~~~v~vv~ 246 (262)
T 2gsm_B 214 WFRAEREGIFFGQCS-ELCGISHAYMPITVKVVS 246 (262)
T ss_dssp EEECCSCEEEEECCC-SCCSTTGGGCCEEEEEEC
T ss_pred EEecCCcEEEEEECh-HhcccCcccCeEEEEEEc
Confidence 577889999999996 567665 999998874
No 55
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=58.76 E-value=12 Score=31.36 Aligned_cols=76 Identities=21% Similarity=0.197 Sum_probs=44.5
Q ss_pred CCceEeCCEEEEEEcCC-----CceEEEEcccccccCcCCCccceeccCCce---EEEecCCccEEEEeCC----CCCcC
Q 038845 61 HESFYVNDWLIFNFDKN-----MYNVLEVNKTSYESCNDKGFIKNITKGGRD---VFQLTEPRPYYFLSGR----GFCWG 128 (177)
Q Consensus 61 ~~~F~vGDtLvF~y~~~-----~H~V~~V~~~~Y~~C~~~~~i~~~~~~G~~---~v~L~~~G~~YFic~~----~HC~~ 128 (177)
..+++.||++.+++.+. .|++..=.....+. .+....-..|.. .++.+++|++||-|.. .|=..
T Consensus 71 ~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~~dG----~~~~~~i~PG~~~~y~f~~~~~Gt~wyH~h~~~~~~~~~~ 146 (327)
T 1kbv_A 71 MIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQGG----GAAATFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIAN 146 (327)
T ss_dssp BEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGG----GTTTTCBCTTEEEEEEEECCSCEEEEEECCCSSHHHHHHT
T ss_pred eEEEeCCCEEEEEEEECCCCCCceeeEeCccccCCC----CCcceeecCCCEEEEEEECCCCeEEEEEeCCCChhhhhhc
Confidence 46788999999988764 35553210000010 010000112322 4666889999999962 24567
Q ss_pred CCeEEEEeecCC
Q 038845 129 GLKAAIFVQETA 140 (177)
Q Consensus 129 GmKl~I~V~~~~ 140 (177)
||.-.|.|.+..
T Consensus 147 Gl~G~~iV~~~~ 158 (327)
T 1kbv_A 147 GMYGLILVEPKE 158 (327)
T ss_dssp TCEEEEEEECTT
T ss_pred ceEEEEEEecCC
Confidence 999999998643
No 56
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=58.54 E-value=68 Score=25.89 Aligned_cols=30 Identities=13% Similarity=0.258 Sum_probs=24.2
Q ss_pred EEEecCCccEEEEeCCCCCcCC---CeEEEEeec
Q 038845 108 VFQLTEPRPYYFLSGRGFCWGG---LKAAIFVQE 138 (177)
Q Consensus 108 ~v~L~~~G~~YFic~~~HC~~G---mKl~I~V~~ 138 (177)
.++.+++|.||..|+ .-|..| |.+.|.|.+
T Consensus 183 ~~~~~~~G~y~g~Cs-e~CG~~Hs~M~~~v~vv~ 215 (227)
T 1v54_B 183 TLMSSRPGLYYGQCS-EICGSNHSFMPIVLELVP 215 (227)
T ss_dssp EECCSSCEEEEECCC-SCCSTTGGGCCEEEEEEC
T ss_pred EEecCCcEEEEEEeh-hhcccccccCeEEEEEEc
Confidence 467789999999996 567665 999998874
No 57
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=50.65 E-value=1.1e+02 Score=25.75 Aligned_cols=30 Identities=10% Similarity=0.132 Sum_probs=24.2
Q ss_pred EEEecCCccEEEEeCCCCCcC---CCeEEEEeec
Q 038845 108 VFQLTEPRPYYFLSGRGFCWG---GLKAAIFVQE 138 (177)
Q Consensus 108 ~v~L~~~G~~YFic~~~HC~~---GmKl~I~V~~ 138 (177)
.++.+++|.||..|+ ..|-. .|++.|.|.+
T Consensus 232 ~~~~~~~G~y~g~Cs-E~CG~~Hs~M~~~v~vvs 264 (298)
T 3hb3_B 232 WFSVDQEGVYFGQCS-ELCGINHAYMPIVVKAVS 264 (298)
T ss_dssp EEECSSSEEEEECCC-SCCSTTTTSCCEEEEEEC
T ss_pred EEEeCCCEEEEEEcc-cccCcCccCCeeEEEEEc
Confidence 567889999999997 45544 5999999975
No 58
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=49.48 E-value=17 Score=29.50 Aligned_cols=65 Identities=18% Similarity=0.168 Sum_probs=39.4
Q ss_pred CceEeCCEEEEEEcCC--CceEEEEcccccccCcCCCccceeccCCc---eEEEecCCccEEEEeCCCCCcC---CCeEE
Q 038845 62 ESFYVNDWLIFNFDKN--MYNVLEVNKTSYESCNDKGFIKNITKGGR---DVFQLTEPRPYYFLSGRGFCWG---GLKAA 133 (177)
Q Consensus 62 ~~F~vGDtLvF~y~~~--~H~V~~V~~~~Y~~C~~~~~i~~~~~~G~---~~v~L~~~G~~YFic~~~HC~~---GmKl~ 133 (177)
..+.+|+.+.|.-++. -|+...-+ - .++...-.|. ..++.+++|.||..|+ ..|-. .|++.
T Consensus 43 l~lP~g~~V~~~lTS~DViHSF~IP~-l---------gvK~daiPGr~n~l~~~~~~pG~y~g~Cs-E~CG~~Hs~M~~~ 111 (205)
T 1cyx_A 43 IAFPANTPVYFKVTSNSVMHSFFIPR-L---------GSQIYAMAGMQTRLHLIANEPGTYDGICA-EICGPGHSGMKFK 111 (205)
T ss_dssp EEEETTSCEEEEEEESSSCEEEEEGG-G---------TEEEEECTTCCEEEEECCSSSEEEEEEEC-SCCSTTSTTCCEE
T ss_pred EEEeCCCEEEEEEecCCceeeEEecc-c---------CcEEEecCCceEEEEEEeCCCeEEEEEcc-cccccchhhceEE
Confidence 4566777777777753 24443211 0 1121111233 2467789999999997 45655 49999
Q ss_pred EEee
Q 038845 134 IFVQ 137 (177)
Q Consensus 134 I~V~ 137 (177)
|.|.
T Consensus 112 v~vv 115 (205)
T 1cyx_A 112 AIAT 115 (205)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9998
No 59
>2hzs_I RNA polymerase II mediator complex subunit 8; beta barrel, channel, helix, transcription; 2.70A {Saccharomyces cerevisiae}
Probab=48.79 E-value=0.2 Score=27.85 Aligned_cols=19 Identities=32% Similarity=0.480 Sum_probs=14.7
Q ss_pred CCceEeCCEEEEEEcCCCc
Q 038845 61 HESFYVNDWLIFNFDKNMY 79 (177)
Q Consensus 61 ~~~F~vGDtLvF~y~~~~H 79 (177)
++.|.|.|.|.|.|..+.|
T Consensus 4 skpfnvddvlkftftgekh 22 (27)
T 2hzs_I 4 SKPFNVDDVLKFTFTGEKH 22 (27)
T ss_dssp --CCCHHHHHHHHHHCCCC
T ss_pred CCCcChhheEEEEeccccc
Confidence 5789999999999987654
No 60
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=47.11 E-value=27 Score=29.00 Aligned_cols=74 Identities=19% Similarity=0.291 Sum_probs=44.6
Q ss_pred CceEeCCEEEEEEcCC-----CceEEEEcccccccCcCCCccceeccCCce---EEEecCCccEEEEeC-CC----CCcC
Q 038845 62 ESFYVNDWLIFNFDKN-----MYNVLEVNKTSYESCNDKGFIKNITKGGRD---VFQLTEPRPYYFLSG-RG----FCWG 128 (177)
Q Consensus 62 ~~F~vGDtLvF~y~~~-----~H~V~~V~~~~Y~~C~~~~~i~~~~~~G~~---~v~L~~~G~~YFic~-~~----HC~~ 128 (177)
.+++.||++.+++.+. -|.+..-.....+ + ..+.... ..|.. .++++++|++||-|. .+ |=..
T Consensus 73 i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~~~--~-~~~~~~i-~PG~~~~y~~~~~~~Gt~wyH~h~~~~~~~~~~~ 148 (340)
T 2bw4_A 73 MVVHENDYVELRLINPDTNTLLHNIDFHAATGAL--G-GGALTQV-NPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTS 148 (340)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG--G-GGGGCCB-CTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHT
T ss_pred EEEcCCCEEEEEEEeCCCCCccCcceeCCcCCCC--C-CccceEe-CCCCEEEEEEECCCCeEEEEEcCCCCchhhHHhC
Confidence 5678999999998874 2555431111000 0 0111111 12332 567778999999997 32 5568
Q ss_pred CCeEEEEeecC
Q 038845 129 GLKAAIFVQET 139 (177)
Q Consensus 129 GmKl~I~V~~~ 139 (177)
||.-.+.|...
T Consensus 149 Gl~G~~iV~~~ 159 (340)
T 2bw4_A 149 GMNGAIMVLPR 159 (340)
T ss_dssp TCEEEEEEECT
T ss_pred cCEEEEEEccC
Confidence 99999988754
No 61
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=46.44 E-value=23 Score=29.43 Aligned_cols=33 Identities=18% Similarity=0.175 Sum_probs=27.4
Q ss_pred EEEecCCccEEEEeC-CCCC-cCCCeEEEEeecCC
Q 038845 108 VFQLTEPRPYYFLSG-RGFC-WGGLKAAIFVQETA 140 (177)
Q Consensus 108 ~v~L~~~G~~YFic~-~~HC-~~GmKl~I~V~~~~ 140 (177)
.++.+++|.|+|.|. ..|+ +.||.-.+.|....
T Consensus 286 lv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 286 LYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKW 320 (336)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred EEEcCCCceEEEEechhhccccCCCeEEEEECCCC
Confidence 466778999999998 5688 89999999998543
No 62
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=45.65 E-value=32 Score=28.11 Aligned_cols=78 Identities=14% Similarity=0.063 Sum_probs=45.0
Q ss_pred CCceEeCCEEEEEEcCC---CceEEEEc--ccccccC--cCCCccceeccCCc--eEEEecCCccEEEEeC-C---CCCc
Q 038845 61 HESFYVNDWLIFNFDKN---MYNVLEVN--KTSYESC--NDKGFIKNITKGGR--DVFQLTEPRPYYFLSG-R---GFCW 127 (177)
Q Consensus 61 ~~~F~vGDtLvF~y~~~---~H~V~~V~--~~~Y~~C--~~~~~i~~~~~~G~--~~v~L~~~G~~YFic~-~---~HC~ 127 (177)
..+++.||++.+++.+. .|++..=. ....|.= ....++. -++. ..++.+++|++||-|- . .|=.
T Consensus 67 ~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~~~~DG~p~~~~~~i~---PG~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~ 143 (288)
T 3gdc_A 67 TLWAREGDALRIHFTNAGAHPHTIHFHGVHRATMDGTPGIGAGSIA---PGQSFTYEFDATPFGTHLYHCHQSPLAPHIA 143 (288)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCCEESSCCCGGGSCCTTSTTCSBC---TTCEEEEEEECCSCEEEEEECCCSSHHHHHH
T ss_pred cEEEeCCCEEEEEEEeCCCCcccEEeccccccccCCCCCccceeEC---CCCEEEEEEEcCCCccEEEEecCcchHHHHh
Confidence 35679999999988863 34442211 0000100 0001111 1122 2567788999999997 3 3567
Q ss_pred CCCeEEEEeecCCC
Q 038845 128 GGLKAAIFVQETAP 141 (177)
Q Consensus 128 ~GmKl~I~V~~~~~ 141 (177)
.||.-.+.|.+..+
T Consensus 144 ~Gl~G~liV~~~~~ 157 (288)
T 3gdc_A 144 KGLYGGFIVEPKEG 157 (288)
T ss_dssp TTCEEEEEEECSSC
T ss_pred CcCeEEEEEeCCcc
Confidence 89999999986544
No 63
>1yel_A AT1G16640; CESG, protein structure initiative, structural genomics, center for eukaryotic structural genomics, unknown function; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=44.35 E-value=12 Score=26.25 Aligned_cols=18 Identities=17% Similarity=0.458 Sum_probs=15.6
Q ss_pred CCCceEeCCEEEEEEcCC
Q 038845 60 SHESFYVNDWLIFNFDKN 77 (177)
Q Consensus 60 ~~~~F~vGDtLvF~y~~~ 77 (177)
..+..+.||.|+|+|...
T Consensus 74 ~~~~L~~GD~lvF~~~~~ 91 (104)
T 1yel_A 74 KDNNLEDGKYLQFIYDRD 91 (104)
T ss_dssp HHHTCCTTCEEEEEECSS
T ss_pred HHcCCCCCCEEEEEEcCC
Confidence 467899999999999864
No 64
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=40.19 E-value=12 Score=27.44 Aligned_cols=11 Identities=27% Similarity=0.449 Sum_probs=10.2
Q ss_pred CceEeCCEEEE
Q 038845 62 ESFYVNDWLIF 72 (177)
Q Consensus 62 ~~F~vGDtLvF 72 (177)
+.+++||+|+|
T Consensus 32 ~~ikvGD~I~f 42 (109)
T 2z0t_A 32 RQIKPGDIIIF 42 (109)
T ss_dssp GGCCTTCEEEE
T ss_pred hcCCCCCEEEE
Confidence 67899999999
No 65
>4i1k_A B3 domain-containing transcription factor VRN1; B3 domain beta-barrel, DNA binding protein; 1.60A {Arabidopsis thaliana}
Probab=39.79 E-value=19 Score=27.12 Aligned_cols=25 Identities=20% Similarity=0.186 Sum_probs=18.8
Q ss_pred CCCceEeCCEEEEEEcCCCceEEEE
Q 038845 60 SHESFYVNDWLIFNFDKNMYNVLEV 84 (177)
Q Consensus 60 ~~~~F~vGDtLvF~y~~~~H~V~~V 84 (177)
..+..++||.++|++.....-+++|
T Consensus 113 ~dn~L~~GD~cvFeli~~~~~~f~V 137 (146)
T 4i1k_A 113 LENNLGEGDVCVFELLRTRDFVLKV 137 (146)
T ss_dssp HHTTCCTTCEEEEEECSSSSCEEEE
T ss_pred HHcCCCCCCEEEEEEecCCceEEEE
Confidence 4688999999999999743335554
No 66
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=39.41 E-value=7 Score=29.59 Aligned_cols=20 Identities=5% Similarity=-0.066 Sum_probs=12.6
Q ss_pred eCCEEEEEEcCCCceEEEEc
Q 038845 66 VNDWLIFNFDKNMYNVLEVN 85 (177)
Q Consensus 66 vGDtLvF~y~~~~H~V~~V~ 85 (177)
-|+.+.|.-+++-++-+..+
T Consensus 77 ~gK~V~~~S~AgY~S~V~y~ 96 (126)
T 4dny_A 77 EGKMVRFVSSAGYSSTVFYG 96 (126)
T ss_dssp TTCEEEEEEECSSCEEEEET
T ss_pred CCCEEEEEEecCccEEEEEC
Confidence 56777777777655555443
No 67
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=35.25 E-value=23 Score=29.47 Aligned_cols=32 Identities=16% Similarity=0.335 Sum_probs=27.2
Q ss_pred EEEecCCccEEEEeC-CCCC-cCCCeEEEEeecC
Q 038845 108 VFQLTEPRPYYFLSG-RGFC-WGGLKAAIFVQET 139 (177)
Q Consensus 108 ~v~L~~~G~~YFic~-~~HC-~~GmKl~I~V~~~ 139 (177)
.++.+++|.|+|.|- ..|+ +.||.-.+.|...
T Consensus 286 ~v~a~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~ 319 (333)
T 1mzy_A 286 LYKFLQPGVYAYVNHNLIEAVHKGATAHVLVEGE 319 (333)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTCCEEEEEEESC
T ss_pred EEEcCCCEEEEEecChhhhHhhCCCEEEEEEcCC
Confidence 466678999999998 5798 9999999999853
No 68
>1xne_A Hypothetical protein PF0469; GFT structural genomics, protein structure initiative, NESG, PFR14, alpha and beta protein; NMR {Pyrococcus furiosus} SCOP: b.122.1.6
Probab=34.78 E-value=10 Score=27.91 Aligned_cols=12 Identities=33% Similarity=0.495 Sum_probs=10.5
Q ss_pred CceEeCCEEEEE
Q 038845 62 ESFYVNDWLIFN 73 (177)
Q Consensus 62 ~~F~vGDtLvF~ 73 (177)
+.+++||+|+|+
T Consensus 33 ~~i~vGD~I~f~ 44 (113)
T 1xne_A 33 KDIKRGDKIIFN 44 (113)
T ss_dssp TTCCTTCEEEET
T ss_pred hccCCCCEEEEc
Confidence 678999999994
No 69
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=31.57 E-value=89 Score=27.91 Aligned_cols=76 Identities=12% Similarity=0.175 Sum_probs=46.5
Q ss_pred CCceEeCCEEEEEEcCCC----ceEEE----Ecccc-ccc-CcC-CCccceeccCCce---EEEecCCccEEEEeC-CCC
Q 038845 61 HESFYVNDWLIFNFDKNM----YNVLE----VNKTS-YES-CND-KGFIKNITKGGRD---VFQLTEPRPYYFLSG-RGF 125 (177)
Q Consensus 61 ~~~F~vGDtLvF~y~~~~----H~V~~----V~~~~-Y~~-C~~-~~~i~~~~~~G~~---~v~L~~~G~~YFic~-~~H 125 (177)
..+++.||+|+.++.+.- +++.- +.... .|. -.. ..+|. .|.+ .++++.+|+|||=|- ..+
T Consensus 35 ~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~----PG~s~tY~f~~~~~GT~wYHsH~~~q 110 (552)
T 1aoz_A 35 TIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAIN----PGETFFYNFTVDNPGTFFYHGHLGMQ 110 (552)
T ss_dssp CEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBC----TTCEEEEEEECCSCEEEEEEECSTTT
T ss_pred cEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccCCcC----CCCeEEEEEECCCCEEEEEEECchhH
Confidence 467899999999988742 23321 11010 111 000 01121 1222 567789999999998 667
Q ss_pred CcCCCeEEEEeecCC
Q 038845 126 CWGGLKAAIFVQETA 140 (177)
Q Consensus 126 C~~GmKl~I~V~~~~ 140 (177)
=..||--.+.|..+.
T Consensus 111 ~~~Gl~G~liV~~~~ 125 (552)
T 1aoz_A 111 RSAGLYGSLIVDPPQ 125 (552)
T ss_dssp GGGTCEEEEEEECCT
T ss_pred HhccCeeeEEEeCCc
Confidence 788999999998654
No 70
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=29.96 E-value=2.2e+02 Score=25.47 Aligned_cols=76 Identities=12% Similarity=0.015 Sum_probs=46.2
Q ss_pred CCceEeCCEEEEEEcCCC----ceEEE----Eccc-cccc-CcC-CCccceeccC-Cc---eEEEecCCccEEEEeC-CC
Q 038845 61 HESFYVNDWLIFNFDKNM----YNVLE----VNKT-SYES-CND-KGFIKNITKG-GR---DVFQLTEPRPYYFLSG-RG 124 (177)
Q Consensus 61 ~~~F~vGDtLvF~y~~~~----H~V~~----V~~~-~Y~~-C~~-~~~i~~~~~~-G~---~~v~L~~~G~~YFic~-~~ 124 (177)
..+++.||+|+.++.+.- +++.- +... ..|. -.. ..++. . |. ..++++++|+|||=|- ..
T Consensus 68 ~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~~tq~~I~----P~G~~~~Y~f~~~q~GT~wYH~H~~~ 143 (559)
T 2q9o_A 68 NIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPIP----PKGGQRTYRWRARQYGTSWYHSHFSA 143 (559)
T ss_dssp CEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBC----TTTEEEEEEEECCSCEEEEEEECSTT
T ss_pred cEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCccccCccC----CCCCeEEEEEECCCCEEEEEEEcccc
Confidence 356789999999988642 34422 1000 0110 000 01121 1 22 2577889999999998 67
Q ss_pred CCcCCCeEEEEeecCC
Q 038845 125 FCWGGLKAAIFVQETA 140 (177)
Q Consensus 125 HC~~GmKl~I~V~~~~ 140 (177)
|=..||.-.+.|..+.
T Consensus 144 q~~~Gl~G~liV~~~~ 159 (559)
T 2q9o_A 144 QYGNGVVGTIQINGPA 159 (559)
T ss_dssp GGGGTCEEEEEEECCC
T ss_pred hhcCCceEEEEecCCC
Confidence 7788999999998543
No 71
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=29.82 E-value=58 Score=27.21 Aligned_cols=80 Identities=14% Similarity=0.091 Sum_probs=0.0
Q ss_pred ceEeCCEEEEEEcCCC--------ceEEEEcc--cccccCcCCCccceeccCCceEEEecCCccEEEEeC-CC--CCc-C
Q 038845 63 SFYVNDWLIFNFDKNM--------YNVLEVNK--TSYESCNDKGFIKNITKGGRDVFQLTEPRPYYFLSG-RG--FCW-G 128 (177)
Q Consensus 63 ~F~vGDtLvF~y~~~~--------H~V~~V~~--~~Y~~C~~~~~i~~~~~~G~~~v~L~~~G~~YFic~-~~--HC~-~ 128 (177)
+++.||++.+++.+.. |.+.+... .|--.=....++....+ =.-.++++++|+|||-|- .. |=. .
T Consensus 38 ~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~~I~PG~~-~~y~f~~~~~Gt~wyH~H~~~~~q~~~~ 116 (339)
T 2zwn_A 38 HVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQPIEAGDS-YTYKFKADRIGTLWYHCHVNVNEHVGVR 116 (339)
T ss_dssp EEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCE-EEEEEECCSCEEEEEECCSSHHHHTTTS
T ss_pred EEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccCccCCCCe-EEEEEECCCCEEEEEEecCCchhhhhcC
Q ss_pred CCeEEEEeecCCCCC
Q 038845 129 GLKAAIFVQETAPTP 143 (177)
Q Consensus 129 GmKl~I~V~~~~~~~ 143 (177)
||.-.+.|.+..+..
T Consensus 117 Gl~G~liV~p~~~~~ 131 (339)
T 2zwn_A 117 GMWGPLIVDPKQPLP 131 (339)
T ss_dssp CCEEEEEEECSSCCT
T ss_pred CceEeEEecCCCccc
No 72
>2b6b_D CD209 antigen; cryo EM dengue CRD DC-SIGN, icosahedral virus, virus-recepto; 25.00A {Homo sapiens} SCOP: d.169.1.1
Probab=29.29 E-value=29 Score=26.01 Aligned_cols=28 Identities=7% Similarity=0.164 Sum_probs=18.4
Q ss_pred ccEEEEeC--CCCCcCCCeEEEEeecCCCC
Q 038845 115 RPYYFLSG--RGFCWGGLKAAIFVQETAPT 142 (177)
Q Consensus 115 G~~YFic~--~~HC~~GmKl~I~V~~~~~~ 142 (177)
..++|||- ...|..+..-.+.....+|.
T Consensus 142 ~~~~fICe~~~~~C~~~~~~~~~p~~~~~~ 171 (175)
T 2b6b_D 142 LAKFWICKKSAASCSRDEEQFLSPAPATPN 171 (175)
T ss_pred CCeeEEEEECCCCCCCCcccccCccccCCC
Confidence 35789998 46898876666555544443
No 73
>2k75_A Uncharacterized protein TA0387; closed beta barrel, OB fold, structural genomics, PSI-2, protein structure initiative; NMR {Thermoplasma acidophilum}
Probab=28.83 E-value=18 Score=25.67 Aligned_cols=29 Identities=3% Similarity=0.134 Sum_probs=23.5
Q ss_pred EEEecCCCCCCCCCCccccCCCCceEeCCEEEEE
Q 038845 40 LHRVGGKLGWTPSVNFTEWSSHESFYVNDWLIFN 73 (177)
Q Consensus 40 ~~~VGg~~GW~~~~~Y~~Wa~~~~F~vGDtLvF~ 73 (177)
+.++||+.| ...++-|-+. |..||++.+.
T Consensus 41 ~~~l~DeTG---~I~~tlW~~~--l~~Gdvv~i~ 69 (106)
T 2k75_A 41 QGYIEDDTA---RIRISSFGKQ--LQDSDVVRID 69 (106)
T ss_dssp EEEEECSSC---EEEEEEESSC--CCTTEEEEEE
T ss_pred EEEEEcCCC---eEEEEEEcCc--cCCCCEEEEE
Confidence 578999877 3567888766 9999999887
No 74
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=25.19 E-value=22 Score=24.95 Aligned_cols=16 Identities=13% Similarity=0.102 Sum_probs=9.1
Q ss_pred cCCCeEEEEeecCCCC
Q 038845 127 WGGLKAAIFVQETAPT 142 (177)
Q Consensus 127 ~~GmKl~I~V~~~~~~ 142 (177)
..+.++.+.|..++.+
T Consensus 100 ~~~~~v~L~V~~~~~~ 115 (124)
T 2nms_A 100 DLGVTVQVTIDPAPVT 115 (124)
T ss_dssp EEEEEEEEEEECCC--
T ss_pred CccEEEEEEEeCCCcC
Confidence 4556677777765443
No 75
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=24.99 E-value=28 Score=28.50 Aligned_cols=31 Identities=16% Similarity=0.194 Sum_probs=26.4
Q ss_pred EEEecCCccEEEEeC-CCCCcCCCeEEEEeec
Q 038845 108 VFQLTEPRPYYFLSG-RGFCWGGLKAAIFVQE 138 (177)
Q Consensus 108 ~v~L~~~G~~YFic~-~~HC~~GmKl~I~V~~ 138 (177)
.++.+.+|.|.|-|- ..|=+.||.-.+.|.+
T Consensus 257 ~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 257 ELRFPYPGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp EECCCSCEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred EEECCCCEEEEEEecChHHHhcCCCEEEEEeC
Confidence 355678999999998 7899999999999864
No 76
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=24.72 E-value=11 Score=31.36 Aligned_cols=31 Identities=13% Similarity=0.117 Sum_probs=19.0
Q ss_pred EEEecCCccEEEEeC-CCCCcCCCeEEEEeec
Q 038845 108 VFQLTEPRPYYFLSG-RGFCWGGLKAAIFVQE 138 (177)
Q Consensus 108 ~v~L~~~G~~YFic~-~~HC~~GmKl~I~V~~ 138 (177)
.++.+++|.++|-|- ..|-+.||...+.|.+
T Consensus 269 ~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~ 300 (306)
T 1sdd_A 269 NMTVSPEGRWTIASLIPRHFQAGMQAYIDIKN 300 (306)
T ss_dssp -------CCCCCBCCSTTTGGGTCBCCC----
T ss_pred EEEcCCCeEEEEEeCChHHHhcCCeEEEEEec
Confidence 456678999999999 8999999999999874
No 77
>3l6w_A Hemocyanin 1; cupredoxin domain, copper-binding protein, metal-binding, oxygen binding; 4.00A {Megathura crenulata} PDB: 3qjo_A
Probab=24.54 E-value=43 Score=30.54 Aligned_cols=73 Identities=12% Similarity=0.167 Sum_probs=39.9
Q ss_pred ceEeCCEEEEEEcCC--CceEEEE-cccccccCcCCCccceeccCCceEEEecCCccEEEEeC-CCCCcCCC-eEEEEee
Q 038845 63 SFYVNDWLIFNFDKN--MYNVLEV-NKTSYESCNDKGFIKNITKGGRDVFQLTEPRPYYFLSG-RGFCWGGL-KAAIFVQ 137 (177)
Q Consensus 63 ~F~vGDtLvF~y~~~--~H~V~~V-~~~~Y~~C~~~~~i~~~~~~G~~~v~L~~~G~~YFic~-~~HC~~Gm-Kl~I~V~ 137 (177)
..+.|-.|.|.=-.+ ..-++.+ +......|...-. .+..=.-..+---++|.|||..+ ..-|++|- ++.|.|+
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (491)
T 3l6w_A 414 VVKRGTKIMFMSVDEAVTTPMLNLGSYTAMFKCKVPPF--SFHAFELGKMYSVESGDYFMTASTTELCNDNNLRIHVHVD 491 (491)
T ss_pred EeecCCEEEEEecccchhhHHHhhhhhhhhhccccCCC--ccCcccccceEecCCCceEecCChHHHHhCCceeEEEEeC
Confidence 345566666633221 1112222 3344566876532 12100011233346799999988 78999998 9999884
No 78
>2hd9_A UPF0310 protein PH1033; pyrococcus horikoshii OT3, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: CIT; 1.35A {Pyrococcus horikoshii} SCOP: b.122.1.8 PDB: 1wmm_A* 2zbn_A
Probab=24.33 E-value=14 Score=27.89 Aligned_cols=29 Identities=10% Similarity=-0.051 Sum_probs=22.3
Q ss_pred CCCCCCCCccccCCCCceEeCCEEEEEEcC
Q 038845 47 LGWTPSVNFTEWSSHESFYVNDWLIFNFDK 76 (177)
Q Consensus 47 ~GW~~~~~Y~~Wa~~~~F~vGDtLvF~y~~ 76 (177)
.||. ++||++-..-+..++||.+.|-.++
T Consensus 19 ~g~~-GVn~~arn~lr~mk~GD~~~fYhs~ 47 (145)
T 2hd9_A 19 HNVW-GVPKKHKNTLSRVKPGDKLVIYVRQ 47 (145)
T ss_dssp HCEE-EECGGGHHHHTTCCTTCEEEEEECC
T ss_pred cCcc-ccCHHHHHHHHhCCCCCEEEEEEcc
Confidence 3566 6688888766789999999877664
No 79
>4doo_A Chalcone-flavanone isomerase family protein; chalcone-isomerase like fold, fatty-acid binding; HET: DAO; 1.90A {Arabidopsis thaliana}
Probab=24.16 E-value=59 Score=25.48 Aligned_cols=28 Identities=7% Similarity=0.012 Sum_probs=20.6
Q ss_pred cCCCCceEeCCEEEEEEcCCCceEEEEc
Q 038845 58 WSSHESFYVNDWLIFNFDKNMYNVLEVN 85 (177)
Q Consensus 58 Wa~~~~F~vGDtLvF~y~~~~H~V~~V~ 85 (177)
|.+..+|..||.|.|.|.++....+.++
T Consensus 134 F~~~~~~~kGd~i~~~~~p~~~l~~~~~ 161 (205)
T 4doo_A 134 FKDEYKIPRNSTIDLTKDPGHVLSVAIE 161 (205)
T ss_dssp GTTCCCCCTTCEEEEEEETTTEEEEEET
T ss_pred hccCCCCCCCCEEEEEEcCCCcEEEEEC
Confidence 4446689999999999998654445444
No 80
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=23.83 E-value=80 Score=30.93 Aligned_cols=74 Identities=8% Similarity=-0.026 Sum_probs=49.5
Q ss_pred CCceEeCCEEEEEEcCC-----CceEEEEc------ccccccCcCCCccceeccCCceEEEecCCccEEEEeC-CCCCcC
Q 038845 61 HESFYVNDWLIFNFDKN-----MYNVLEVN------KTSYESCNDKGFIKNITKGGRDVFQLTEPRPYYFLSG-RGFCWG 128 (177)
Q Consensus 61 ~~~F~vGDtLvF~y~~~-----~H~V~~V~------~~~Y~~C~~~~~i~~~~~~G~~~v~L~~~G~~YFic~-~~HC~~ 128 (177)
...+..||.++.+..+. -|++.+-. ...++.|...-. . +-...++.+.+|++++-|- ..|=..
T Consensus 633 ~l~~~~gd~v~~~v~~~g~~~~~Hgl~~~g~t~~~dG~~~~t~~i~pg-~----~~t~~~~~~~~Gt~~~h~h~~~~~~~ 707 (1065)
T 2j5w_A 633 GLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLWRGERRDTANLFPQ-T----SLTLHMWPDTEGTFNVECLTTDHYTG 707 (1065)
T ss_dssp CCEEETTCCEEEEEECCCSTTCCEEEEETTCCEEETTEEESEEEECTT-C----EEEEEECCCSCEEEEEEECSHHHHHT
T ss_pred ceEEeCCCEEEEEEEcCCCcceEEeeEEeCCceeecCeecceEeecCC-c----eEEEEEecCCCeEEEEecCCCcccCC
Confidence 47899999999887752 36665422 222344543211 0 0123466778999999998 778899
Q ss_pred CCeEEEEeecC
Q 038845 129 GLKAAIFVQET 139 (177)
Q Consensus 129 GmKl~I~V~~~ 139 (177)
||+..+.|...
T Consensus 708 Gm~g~~~V~~~ 718 (1065)
T 2j5w_A 708 GMKQKYTVNQC 718 (1065)
T ss_dssp TCEEEEEEECC
T ss_pred CcEEEEEEcCC
Confidence 99999999754
No 81
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=23.78 E-value=51 Score=27.38 Aligned_cols=33 Identities=15% Similarity=0.135 Sum_probs=26.6
Q ss_pred EEEecCCccEEEEeC-CCCC-cCCCeEEEEeecCC
Q 038845 108 VFQLTEPRPYYFLSG-RGFC-WGGLKAAIFVQETA 140 (177)
Q Consensus 108 ~v~L~~~G~~YFic~-~~HC-~~GmKl~I~V~~~~ 140 (177)
.++.+++|.|+|.|- ..|| +.||...+.+....
T Consensus 275 ~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 275 EFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp EEEECSCEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred EEEeCCCeEEEEEeccccccccCCcEEEEEECCCC
Confidence 456678999999998 6788 78998888887543
No 82
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=23.42 E-value=1.2e+02 Score=27.01 Aligned_cols=76 Identities=14% Similarity=0.215 Sum_probs=46.3
Q ss_pred CCceEeCCEEEEEEcCCCc----eE-----EEEccccccc-CcC-CCccceeccCCc---eEEEec-CCccEEEEeC-CC
Q 038845 61 HESFYVNDWLIFNFDKNMY----NV-----LEVNKTSYES-CND-KGFIKNITKGGR---DVFQLT-EPRPYYFLSG-RG 124 (177)
Q Consensus 61 ~~~F~vGDtLvF~y~~~~H----~V-----~~V~~~~Y~~-C~~-~~~i~~~~~~G~---~~v~L~-~~G~~YFic~-~~ 124 (177)
..+++.||+|+.++.++-. ++ .+-.....|. -.. ..+|. .|. ..++++ ++|+|||=|- ..
T Consensus 35 ~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq~pI~----PG~~~~Y~f~~~~~~GT~wYH~H~~~ 110 (534)
T 1zpu_A 35 DITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQCPIA----PGSTMLYNFTVDYNVGTYWYHSHTDG 110 (534)
T ss_dssp CEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTBCCBC----TTCEEEEEEECSSCCEEEEEECCSSS
T ss_pred cEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCccccCCcC----CCCeEEEEEEeCccceeEEEEEcCcc
Confidence 3678999999999987532 22 1100000110 000 01121 122 256777 8999999998 67
Q ss_pred CCcCCCeEEEEeecCC
Q 038845 125 FCWGGLKAAIFVQETA 140 (177)
Q Consensus 125 HC~~GmKl~I~V~~~~ 140 (177)
|=..|+.-.+.|..+.
T Consensus 111 q~~~Gl~G~liV~~~~ 126 (534)
T 1zpu_A 111 QYEDGMKGLFIIKDDS 126 (534)
T ss_dssp GGGGTCEEEEEEECTT
T ss_pred cccCcceeeEEeCCCC
Confidence 7788999999998654
No 83
>2y7l_A NT_ALS9-2, agglutinin-like ALS9 protein; cell adhesion, adhesin, peptide binding protein; 1.49A {Candida albicans} PDB: 2y7m_A 2y7n_A 2y7o_A 2ylh_A
Probab=23.00 E-value=34 Score=29.45 Aligned_cols=36 Identities=19% Similarity=0.286 Sum_probs=27.3
Q ss_pred CCCceEeCCEE------EEEEcCCCceEEEE-cccccccCcCC
Q 038845 60 SHESFYVNDWL------IFNFDKNMYNVLEV-NKTSYESCNDK 95 (177)
Q Consensus 60 ~~~~F~vGDtL------vF~y~~~~H~V~~V-~~~~Y~~C~~~ 95 (177)
++...+.||+- ||||...+-.|... +...|..|+..
T Consensus 41 dgs~v~~GDtFtL~MP~VfKf~~~~t~v~L~a~G~~yAtC~~~ 83 (312)
T 2y7l_A 41 NSTTADPGDTFTLILPCVFKFITTQTSVDLTADGVSYATCDFN 83 (312)
T ss_dssp ETTTCCTTCEEEEEEETEEEESSSCSEEEEEETTEEEEEEEEE
T ss_pred ccCcCCCCCEEEEecccEEEEccCCceEEEecCCeEEEEEecc
Confidence 45688999997 88998777777554 77788888764
No 84
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=22.90 E-value=1.6e+02 Score=26.08 Aligned_cols=33 Identities=18% Similarity=0.341 Sum_probs=26.7
Q ss_pred EEEe-cCCccEEEEeC-CCCCcCCCeEEEEeecCC
Q 038845 108 VFQL-TEPRPYYFLSG-RGFCWGGLKAAIFVQETA 140 (177)
Q Consensus 108 ~v~L-~~~G~~YFic~-~~HC~~GmKl~I~V~~~~ 140 (177)
.+++ +++|+|||=|- ..+=..|+.-.+.|.++.
T Consensus 97 ~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~ 131 (495)
T 3t6v_A 97 NFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPN 131 (495)
T ss_dssp EEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred EEEeCCCCceeeeeccchhHHhcCceEEEEEcCcc
Confidence 4667 57999999998 667778999999998654
No 85
>2qcp_X Cation efflux system protein CUSF; silver-binding, copper-binding, beta barrel, OB-fold, metall metal resistance, metal-binding; 1.00A {Escherichia coli str} PDB: 1zeq_X 3e6z_X
Probab=22.29 E-value=39 Score=22.91 Aligned_cols=17 Identities=24% Similarity=0.337 Sum_probs=14.4
Q ss_pred CCCceEeCCEEEEEEcC
Q 038845 60 SHESFYVNDWLIFNFDK 76 (177)
Q Consensus 60 ~~~~F~vGDtLvF~y~~ 76 (177)
.-..+++||.+.|.|..
T Consensus 50 ~l~~lk~Gd~V~F~~~~ 66 (80)
T 2qcp_X 50 KMSEIKTGDKVAFNFVQ 66 (80)
T ss_dssp EECCCCTTCEEEEEEEE
T ss_pred hhhcCCCCCEEEEEEEE
Confidence 34679999999999985
No 86
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=21.80 E-value=1.5e+02 Score=27.16 Aligned_cols=33 Identities=21% Similarity=0.224 Sum_probs=27.3
Q ss_pred EEEecCCccEEEEeC-CCCCcCCCeEEEEeecCC
Q 038845 108 VFQLTEPRPYYFLSG-RGFCWGGLKAAIFVQETA 140 (177)
Q Consensus 108 ~v~L~~~G~~YFic~-~~HC~~GmKl~I~V~~~~ 140 (177)
.++++++|+|||=|- ..+=..|+.-.|.|..+.
T Consensus 156 ~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~ 189 (580)
T 3sqr_A 156 KFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGPA 189 (580)
T ss_dssp EEECCCCEEEEEEECSTTGGGGTCEEEEEEECCC
T ss_pred EEECCCCcceEEeecccccccCcCEEEEEeeCcc
Confidence 577889999999998 667778999999998543
No 87
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=21.74 E-value=1.8e+02 Score=25.89 Aligned_cols=33 Identities=18% Similarity=0.375 Sum_probs=26.6
Q ss_pred EEEe-cCCccEEEEeC-CCCCcCCCeEEEEeecCC
Q 038845 108 VFQL-TEPRPYYFLSG-RGFCWGGLKAAIFVQETA 140 (177)
Q Consensus 108 ~v~L-~~~G~~YFic~-~~HC~~GmKl~I~V~~~~ 140 (177)
.+++ +++|+|||=|- ..+=..|+.-.+.|.++.
T Consensus 96 ~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~ 130 (499)
T 3pxl_A 96 DFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPN 130 (499)
T ss_dssp EEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred EEEcCCCCceeeeeccchhHHhccceeEEEEcCCc
Confidence 4666 57999999998 667778999999998654
No 88
>2vb2_X Copper protein, cation efflux system protein CUSF; cation PI, metal-binding, metal transport, copper tolerance, transport; 1.70A {Escherichia coli} PDB: 2vb3_X
Probab=21.59 E-value=46 Score=23.02 Aligned_cols=20 Identities=20% Similarity=0.258 Sum_probs=15.9
Q ss_pred ccCCCCceEeCCEEEEEEcC
Q 038845 57 EWSSHESFYVNDWLIFNFDK 76 (177)
Q Consensus 57 ~Wa~~~~F~vGDtLvF~y~~ 76 (177)
+.+.-..+++||.+.|.|..
T Consensus 55 ~~~~l~~lk~Gd~V~F~~~~ 74 (88)
T 2vb2_X 55 PQTKMSEIKTGDKVAFNFVQ 74 (88)
T ss_dssp TTCEECCCCTTCEEEEEEEE
T ss_pred ChhhhhcCCCCCEEEEEEEE
Confidence 34445789999999999985
No 89
>2xr6_A CD209 antigen; sugar binding protein, carbohydrate binding, mannose; HET: MAN 07B; 1.35A {Homo sapiens} PDB: 1sl4_A* 2it6_A* 1k9i_A* 2xr5_A* 1sl5_A* 2it5_A* 1xph_A 1k9j_A*
Probab=21.30 E-value=30 Score=25.50 Aligned_cols=28 Identities=4% Similarity=0.029 Sum_probs=8.8
Q ss_pred ccEEEEeC--CCCCcCCCeEEEEeecCCCC
Q 038845 115 RPYYFLSG--RGFCWGGLKAAIFVQETAPT 142 (177)
Q Consensus 115 G~~YFic~--~~HC~~GmKl~I~V~~~~~~ 142 (177)
..++|||- ...|.......+......|.
T Consensus 137 ~~~~fICe~~~~~C~~~~~~~~~p~~~~p~ 166 (170)
T 2xr6_A 137 LAKFWICKKSAASSSRDEEQFLSPAPATPN 166 (170)
T ss_dssp SCBEEEEEEETTTC----------------
T ss_pred CCccEEEEECCCCCCCCcccccCCCCCCCC
Confidence 34789998 46798776555555444443
No 90
>2b1y_A Hypothetical protein ATU1913; NEW fold, structural genomics, PSI, PR structure initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: b.156.1.1
Probab=20.95 E-value=3.7 Score=30.13 Aligned_cols=78 Identities=10% Similarity=0.122 Sum_probs=48.6
Q ss_pred CceEeCCEEEEEEcCCCceEEEEcccccccCcCCCccc---eeccCCceEEEecCCccEEEEeC-CCCCcCCCeEEEEee
Q 038845 62 ESFYVNDWLIFNFDKNMYNVLEVNKTSYESCNDKGFIK---NITKGGRDVFQLTEPRPYYFLSG-RGFCWGGLKAAIFVQ 137 (177)
Q Consensus 62 ~~F~vGDtLvF~y~~~~H~V~~V~~~~Y~~C~~~~~i~---~~~~~G~~~v~L~~~G~~YFic~-~~HC~~GmKl~I~V~ 137 (177)
....-||+++..-+. .-||..+|.+.|..=......+ ...+.++..+++..+|.+|.+=. .+|+. .-+-.|++.
T Consensus 14 ~~l~~Gd~V~V~cs~-~~nVrLmd~~Nf~~~~~g~~~~~~GG~~~~~P~~itVP~sG~W~vvID~~g~~~-~~~~SI~vi 91 (104)
T 2b1y_A 14 KELRAGTTLEISLSS-VNNVRLMTGANFQRFTELLDFKYLGGVAKKSPIRIAVPETMHWHLIIDAEGHSG-LAESSVKML 91 (104)
T ss_dssp CCCCTTCCCCCCCSS-SCCCCCCCHHHHHHHHHHTTCCCSCCCCCSSSCCCCCCSSSCCCCCCCCTTSSS-CCCCCCCCC
T ss_pred hhccCCCEEEEEeCC-ceeEEEcCchhhhhhhccCceeEeccccccCCEEEECCCCceEEEEEecCCcCC-cceeeEEEe
Confidence 366779999888874 6777777766554322111110 01122445677778899888777 77777 677788887
Q ss_pred cCCC
Q 038845 138 ETAP 141 (177)
Q Consensus 138 ~~~~ 141 (177)
++++
T Consensus 92 pa~~ 95 (104)
T 2b1y_A 92 PAQP 95 (104)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 5443
No 91
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=20.77 E-value=37 Score=23.77 Aligned_cols=10 Identities=40% Similarity=0.537 Sum_probs=4.4
Q ss_pred CCeEEEEeec
Q 038845 129 GLKAAIFVQE 138 (177)
Q Consensus 129 GmKl~I~V~~ 138 (177)
+....++|..
T Consensus 106 s~~~~L~V~~ 115 (129)
T 3rrq_A 106 SLRAELRVTE 115 (129)
T ss_dssp CCCEEEEEEC
T ss_pred eceEEEEEec
Confidence 3344444443
No 92
>4he6_A Peptidase family U32; ultra-tight crystal packing, unknown function; 1.10A {Geobacillus thermoleovorans} PDB: 4he5_A
Probab=20.12 E-value=62 Score=21.80 Aligned_cols=17 Identities=18% Similarity=0.022 Sum_probs=13.5
Q ss_pred CCceEeCCEEEEEEcCC
Q 038845 61 HESFYVNDWLIFNFDKN 77 (177)
Q Consensus 61 ~~~F~vGDtLvF~y~~~ 77 (177)
..+|.+||.|+|--..+
T Consensus 27 rN~f~~GD~iEi~~P~g 43 (89)
T 4he6_A 27 RNHFRPGDEVEFFGPEI 43 (89)
T ss_dssp SSCBCTTCEEEEESTTS
T ss_pred cCCcCCCCEEEEEcCCC
Confidence 67899999999875543
Done!