BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038848
(446 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FJK3|AGL80_ARATH Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana
GN=AGL80 PE=1 SV=1
Length = 321
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 111/154 (72%), Gaps = 1/154 (0%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSPDESEPAMWPS 60
MTRKKVKL +I+NDS+RKA+ KKRK GL+KKV EL+TLC + A IIYSP ++ P +WPS
Sbjct: 1 MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60
Query: 61 RPVVEQLLARFNNMPEMEKSKKMMNQETYLKERVVKSQDQLKKNSRKNKVMEVSNLMEQF 120
V+++++ F +PEM++ KKM++QE +LK+R+ K+ + L++ + ++ +E++ +M Q
Sbjct: 61 NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC 120
Query: 121 HLGK-KTDDFNINELQGLVWLMEERKKDLRKRMD 153
+G + NI +L L +++E+ KD+ +R++
Sbjct: 121 LIGNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIE 154
>sp|Q7XJK6|AGL36_ARATH Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana
GN=AGL36 PE=1 SV=1
Length = 366
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 89/145 (61%), Gaps = 12/145 (8%)
Query: 4 KKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSPDESEPAMWPSRPV 63
KKVKL+ IAN+ +RK S KRK G+ KK+ EL+TLC V A +IYSP P WPSR
Sbjct: 2 KKVKLSLIANERSRKTSFIKRKDGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61
Query: 64 VEQLLARFNNMPEMEKSKKMMNQETYLKERVVKSQDQLKKNSRKNKVMEVSNL------- 116
+++ +RF MP ++KKMM+QETYL ER+ K+++QLK + +N+ ++V
Sbjct: 62 AKKVASRFLEMPPTARTKKMMDQETYLMERITKAKEQLKNLAAENRELQVRRFMFDCVEG 121
Query: 117 -MEQFHLGKKTDDFNINELQGLVWL 140
M Q+H K ++ +LQ + L
Sbjct: 122 KMSQYHYDAK----DLQDLQSCINL 142
>sp|Q7XJK5|AGL90_ARATH Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana
GN=AGL90 PE=1 SV=2
Length = 320
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 89/139 (64%), Gaps = 1/139 (0%)
Query: 4 KKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSPDESEPAMWPSRPV 63
KKVKL+ IAN+ +RK S KRK G+ KK+ EL+TLC V A +IYSP P WPSR
Sbjct: 2 KKVKLSLIANERSRKTSFMKRKNGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61
Query: 64 VEQLLARFNNMPEMEKSKKMMNQETYLKERVVKSQDQLKKNSRKNKVMEVSNLMEQFHLG 123
+++ ++F MP +++KMM+QET+L ER+ K+++QLK + +N+ ++V M G
Sbjct: 62 AKKVASKFLEMPRTARTRKMMDQETHLMERITKAKEQLKNLAAENRELQVRRFMFDCVEG 121
Query: 124 KKTD-DFNINELQGLVWLM 141
K + ++ +LQ L+ M
Sbjct: 122 KMSQYRYDAKDLQDLLSCM 140
>sp|Q9C6V4|AGL92_ARATH Agamous-like MADS-box protein AGL92 OS=Arabidopsis thaliana
GN=AGL92 PE=1 SV=1
Length = 464
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 90/153 (58%), Gaps = 2/153 (1%)
Query: 3 RKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSPDESEPAMWPSRP 62
R K KL I + R+A+ +KR G+ KK+ ELTTLCD+ A +IYSP E+ P +WPS
Sbjct: 2 RTKTKLVLIPDRHFRRATFRKRNAGIRKKLHELTTLCDIKACAVIYSPFEN-PTVWPSTE 60
Query: 63 VVEQLLARFNNMPEMEKSKKMMNQETYLKERVVKSQDQLKKNSRKNKVMEVSNLMEQFHL 122
V+++++ F P E+SK MM+ ET+L++++ K Q++L+ R+N+ ++ + M
Sbjct: 61 GVQEVISEFMEKPATERSKTMMSHETFLRDQITKEQNKLESLRRENRETQLKHFMFDCVG 120
Query: 123 GKKTD-DFNINELQGLVWLMEERKKDLRKRMDY 154
GK ++ + +LQ L ++ L R +
Sbjct: 121 GKMSEQQYGARDLQDLSLFTDQYLNQLNARKKF 153
>sp|Q7XJK8|PHE2_ARATH MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana
GN=PHE2 PE=1 SV=1
Length = 278
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 105/170 (61%), Gaps = 6/170 (3%)
Query: 3 RKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSPDESEPAMWPSRP 62
++K+KL+ I N +RK + KRK G+ KK++EL TLC V A ++YSP S P WPSR
Sbjct: 2 KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61
Query: 63 VVEQLLARFNNMPEMEKSKKMMNQETYLKERVVKSQDQLKKNSRKNKVMEVSNLMEQF-H 121
VE ++++F + ++++KKM++QET++ +R+ K ++QL+K +N ++ LM F
Sbjct: 62 GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDENHNSQIRELM--FGC 119
Query: 122 LGKKTDDFNIN--ELQGLVWLMEERKKDLRKRMDYYEQINPPPQESLPPP 169
L +T+ +N++ +LQ L +++ L +R++ + N SLP P
Sbjct: 120 LKGETNVYNLDGRDLQDLSLYIDKYLNGLTRRIEILIE-NGESSSSLPLP 168
>sp|O80805|PHE1_ARATH MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana
GN=PHE1 PE=1 SV=1
Length = 279
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 80/115 (69%)
Query: 3 RKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSPDESEPAMWPSRP 62
R K+KL++I NDS RK + KRK G+LKK +EL TLC V+A +I SP S WPSR
Sbjct: 2 RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQEPWPSRE 61
Query: 63 VVEQLLARFNNMPEMEKSKKMMNQETYLKERVVKSQDQLKKNSRKNKVMEVSNLM 117
VE+++++F ++++KKM++QET+L++R+ K ++L+K +N+ ++ +LM
Sbjct: 62 GVEEVMSKFMEFSVLDRTKKMVDQETFLRQRIAKETERLQKLRDENRNSQIRDLM 116
>sp|Q9C6V3|AGL86_ARATH Agamous-like MADS-box protein AGL86 OS=Arabidopsis thaliana
GN=AGL86 PE=1 SV=1
Length = 339
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 93/170 (54%), Gaps = 3/170 (1%)
Query: 3 RKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSPDESEPAMWPSRP 62
R K+KL+ IAN ++R+ + +KRK G+ K+ ELTTLC V A +I SP E+ P +WPS
Sbjct: 2 RSKIKLSLIANKTSRRTTFRKRKGGITNKLHELTTLCGVKACAVISSPYEN-PVVWPSTE 60
Query: 63 VVEQLLARFNNMPEMEKSKKMMNQETYLKERVVKSQDQLKKNSRKNKVMEVSNLMEQFHL 122
V++ ++ F P E+SK MM+ ETYL++++ K +L+ R+N+ ++ M
Sbjct: 61 GVQEAVSMFMERPATEQSKLMMSHETYLQDKITKETKKLESLRRENRESQLRQFMFDCVE 120
Query: 123 GKKTD-DFNINELQGLVWLMEERKKDLRKRMDYYEQINPPPQESLPPPPH 171
GK ++ + +LQ L ++ L + N S PPP H
Sbjct: 121 GKMSEHQYGARDLQDLSLYIDHYINQLNSSVMLLTN-NGASSSSFPPPLH 169
>sp|Q6R4R6|CALD_BRAOB Truncated transcription factor CAULIFLOWER D OS=Brassica oleracea
var. botrytis GN=CAL-D PE=2 SV=1
Length = 148
Score = 58.9 bits (141), Expect = 8e-08, Method: Composition-based stats.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSPDESEPAMWPS 60
M R +V++ I N R+ + KR+ GLLKK E++ LCD +I++S + + + S
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFS-HKGKLFEYSS 59
Query: 61 RPVVEQLLARFNNMPEMEKSKKMMNQETYLKERVVKSQDQLK-KNSRKNKVMEVSNLMEQ 119
+E++L R+ EK K + V +Q + SR +E+ ++
Sbjct: 60 ESCMEKVLERYERYSYAEKQLKAPDSH-------VNAQTNWSMEYSRLKAKIELWERNQR 112
Query: 120 FHLGKKTDDFNINELQGLVWLMEERKKDLRKR 151
+LG+ + +I ELQ L ++ K +R R
Sbjct: 113 HYLGEDLESISIKELQNLEQQLDTSLKHIRSR 144
>sp|Q6R4R7|CALC_BRAOB Truncated transcription factor CAULIFLOWER C OS=Brassica oleracea
var. botrytis GN=CAL-C PE=2 SV=1
Length = 148
Score = 55.5 bits (132), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 9/152 (5%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSPDESEPAMWPS 60
M R +V++ I N R+ + KR+ GLLKK E++ LCD +I++S + + + S
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFS-HKGKLFEYSS 59
Query: 61 RPVVEQLLARFNNMPEMEKSKKMMNQETYLKERVVKSQDQLK-KNSRKNKVMEVSNLMEQ 119
+E++L R+ EK K + V +Q + SR +E+ ++
Sbjct: 60 ESCMEKVLERYERYSYAEKQLKAPDSH-------VNAQTNWSMEYSRLKAKIELWERNQR 112
Query: 120 FHLGKKTDDFNINELQGLVWLMEERKKDLRKR 151
+LG+ + +I ELQ L ++ K + R
Sbjct: 113 HYLGEDLESISIKELQNLEQQLDTSLKHIPSR 144
>sp|P0C5B2|MAD56_ORYSJ MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica
GN=MADS56 PE=2 SV=1
Length = 233
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 84/158 (53%), Gaps = 11/158 (6%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSPDESEPAMWPS 60
M R + +L I N ++R+ + KR+ GLLKK EL+ LCD +I++SP + S
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSP-RGRLYEFAS 59
Query: 61 RPVVEQLLARFNNMPEMEKSKKMMNQETYLKERVVKSQDQLKKNSRKNKVMEVSNLMEQF 120
P +++ + R+ +K +N +T +++ + + +D ++K + ++ S +
Sbjct: 60 APSLQKTIDRYKAY-----TKDHVNNKT-IQQDIQQVKDDTLGLAKKLEALDESR---RK 110
Query: 121 HLGKKTDDFNINELQGLVWLMEERKKDLR-KRMDYYEQ 157
LG+ + F+I EL+GL +E+ +R K+ + EQ
Sbjct: 111 ILGENLEGFSIEELRGLEMKLEKSLHKIRLKKTELLEQ 148
>sp|Q6R4S6|CAL_BRARC Transcription factor CAULIFLOWER OS=Brassica rapa subsp. chinensis
GN=CAL PE=2 SV=1
Length = 254
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 35/165 (21%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSPDESEPAMWPS 60
M R +V++ I N R+ + KR+ GLLKK E++ LCD +I++S + + + S
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFS-HKGKLFEYSS 59
Query: 61 RPVVEQLLARFNNMPEMEKSKKMMNQETYLKERVVKSQDQLKK-----NSRKNKVMEVSN 115
+E++L R+ ER ++ QLK N++ N ME S
Sbjct: 60 ESCMEKVLERY--------------------ERYSYAEKQLKAPDSHVNAQTNWSMEYSR 99
Query: 116 LM---------EQFHLGKKTDDFNINELQGLVWLMEERKKDLRKR 151
L ++ +LG+ + +I ELQ L ++ K +R R
Sbjct: 100 LKAKIELLERNQRHYLGEDLESISIKELQNLEQQLDTSLKHIRSR 144
>sp|Q6R4S3|CAL_BRARA Transcription factor CAULIFLOWER OS=Brassica rapa GN=CAL PE=2 SV=1
Length = 254
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 35/165 (21%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSPDESEPAMWPS 60
M R +V++ I N R+ + KR+ GLLKK E++ LCD +I++S + + + S
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFS-HKGKLFEYSS 59
Query: 61 RPVVEQLLARFNNMPEMEKSKKMMNQETYLKERVVKSQDQLKK-----NSRKNKVMEVSN 115
+E++L R+ ER ++ QLK N++ N ME S
Sbjct: 60 ESCMEKVLERY--------------------ERYSYAEKQLKAPDSHVNAQTNWSMEYSR 99
Query: 116 LM---------EQFHLGKKTDDFNINELQGLVWLMEERKKDLRKR 151
L ++ +LG+ + +I ELQ L ++ K +R R
Sbjct: 100 LKAKIELLERNQRHYLGEDLESISIKELQNLEQQLDTSLKHIRSR 144
>sp|Q9SBK9|CAL_BRARP Transcription factor CAULIFLOWER OS=Brassica rapa subsp. pekinensis
GN=CAL PE=2 SV=1
Length = 254
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 35/165 (21%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSPDESEPAMWPS 60
M R +V++ I N R+ + KR+ GLLKK E++ LCD +I++S + + + S
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFS-HKGKLFEYSS 59
Query: 61 RPVVEQLLARFNNMPEMEKSKKMMNQETYLKERVVKSQDQLKK-----NSRKNKVMEVSN 115
+E++L R+ ER ++ QLK N++ N ME S
Sbjct: 60 ESCMEKVLERY--------------------ERYSYAEKQLKAPDSHVNAQTNWSMEYSR 99
Query: 116 LM---------EQFHLGKKTDDFNINELQGLVWLMEERKKDLRKR 151
L ++ +LG+ + +I ELQ L ++ K +R R
Sbjct: 100 LKAKIELLERNQRHYLGEDLESISIKELQNLEQQLDTSLKHIRSR 144
>sp|Q9FVC1|SVP_ARATH MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1
Length = 240
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSP 50
M R+K+++ I N +AR+ + KR+ GL KK EL+ LCD + +II+S
Sbjct: 1 MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSS 50
>sp|Q9FUY6|JOIN_SOLLC MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1
Length = 265
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYS 49
M R+K+++ I N +AR+ + KR+ GL KK EL+ LCD + +II+S
Sbjct: 1 MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFS 49
>sp|Q38876|AGL8_ARATH Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8
PE=1 SV=1
Length = 242
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 83/173 (47%), Gaps = 11/173 (6%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSPDESEPAMWPS 60
M R +V+L I N R+ + KR+ GLLKK E++ LCD +I++S + + + +
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSS-KGKLFEYST 59
Query: 61 RPVVEQLLARFNNMPEMEKSKKMMNQETYLKERVVKSQDQLKKNSRKNKVMEVSNLMEQF 120
+E++L R++ + K+++ ++ E V +LK +EV ++
Sbjct: 60 DSCMERILERYDRY--LYSDKQLVGRDVSQSENWVLEHAKLKAR------VEVLEKNKRN 111
Query: 121 HLGKKTDDFNINELQGLVWLMEERKKDLRKRMD--YYEQINPPPQESLPPPPH 171
+G+ D ++ ELQ L ++ K +R R + +E I+ ++ H
Sbjct: 112 FMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDH 164
>sp|P40791|MEF2_DROME Myocyte-specific enhancer factor 2 OS=Drosophila melanogaster
GN=Mef2 PE=1 SV=3
Length = 540
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYS 49
M RKK++++ I ++ R+ + KRK G++KK EL+ LCD +II+S
Sbjct: 1 MGRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFS 49
>sp|Q2QQA3|MAD20_ORYSJ MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica
GN=MADS20 PE=2 SV=2
Length = 233
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 32/166 (19%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSPDESEPAMWPS 60
M R KV++ I N+ +R+ + KR+ GLLKK E+ LCDV+ I++S + S
Sbjct: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
Query: 61 RPVVEQLLARFN-------------NMPEMEKSKKMMNQETYLKERVVKSQDQLKKNSRK 107
+E++L +++ PE+E S M L+ R+ + LKK+ R
Sbjct: 61 HTTMERILEKYDRHELLSEGNNVIEEFPELEGS--MSYDHIKLRGRI----EALKKSQR- 113
Query: 108 NKVMEVSNLMEQFHLGKKTDDFNINELQGLVWLMEERKKDLRKRMD 153
NLM G++ D + ++Q L ++ ++R R +
Sbjct: 114 -------NLM-----GQELDSLTLQDIQQLENQIDTSLNNIRSRKE 147
>sp|Q55F37|SRFC_DICDI Serum factor response C OS=Dictyostelium discoideum GN=srfC PE=3
SV=1
Length = 1050
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSPDESEPAMWPS 60
M R K+ + I+N+ R+A+ KRK GL+KK EL+ LCD +I++S ++ + S
Sbjct: 3 MGRNKITIEKISNERNRQATFTKRKNGLIKKAMELSILCDCEIAMIVFS-SNNKLFQYSS 61
Query: 61 RPVVEQLLARFNNMPEMEKSKKMMNQE 87
R +++LL R+ + + + K + NQ+
Sbjct: 62 RD-MDKLLIRYTDNTDNTR-KNLTNQD 86
>sp|O89038|MEF2D_RAT Myocyte-specific enhancer factor 2D OS=Rattus norvegicus GN=Mef2d
PE=1 SV=1
Length = 507
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIY 48
M RKK+++ I ++ R+ + KRK GL+KK EL+ LCD +II+
Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|O22328|AGL8_SOLCO Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii
GN=SCM1 PE=2 SV=1
Length = 250
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 107/278 (38%), Gaps = 50/278 (17%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSPDESEPAMWPS 60
M R +V+L I N R+ + KR+ GLLKK E++ LCD +I++S + + + +
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFST-KGKLFEYAT 59
Query: 61 RPVVEQLLARFNNMPEMEKSKKMMNQETYLKERVVKSQDQLK------------KNSRKN 108
+E+LL R+ ER ++ QL +N++
Sbjct: 60 DSCMERLLERY--------------------ERYSFAEKQLVPTDHTSPGSWTLENAKLK 99
Query: 109 KVMEVSNLMEQFHLGKKTDDFNINELQGLVWLMEERKKDLRKRMDYYEQINPPPQESLPP 168
+EV E+ ++G+ + N+ ELQ L + K +R R N ES+
Sbjct: 100 ARLEVLQRNEKLYVGEDLESLNMKELQNLEHQLASALKHIRSRK------NQLMHESISV 153
Query: 169 PPHPPQLPAPEDSTAGVGGSTGGGGRNLTESAQWDQ---------WFIDMMKNSENIAGS 219
Q A ++ + + + + QWDQ + + +S ++ +
Sbjct: 154 L--QKQDRALQEQNNQLSKKVKEREKEVEQQNQWDQQNHEINSSTFVLPQQLDSPHLGEA 211
Query: 220 SSGRTKSDAGSASHQAFAASSGAANQMGLPHGNPRAYN 257
S D G + GAAN +P R N
Sbjct: 212 SQNTNVVDNGEVEGGNSSQXQGAANNTVMPQWMVRHLN 249
>sp|Q63943|MEF2D_MOUSE Myocyte-specific enhancer factor 2D OS=Mus musculus GN=Mef2d PE=1
SV=2
Length = 514
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIY 48
M RKK+++ I ++ R+ + KRK GL+KK EL+ LCD +II+
Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|Q14814|MEF2D_HUMAN Myocyte-specific enhancer factor 2D OS=Homo sapiens GN=MEF2D PE=1
SV=1
Length = 521
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIY 48
M RKK+++ I ++ R+ + KRK GL+KK EL+ LCD +II+
Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|Q9XJ60|MAD50_ORYSJ MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica
GN=MADS50 PE=2 SV=1
Length = 230
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 15/144 (10%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSPDES--EPAMW 58
M R K ++ I N ++R+ + KR+ GLLKK EL+ LCD +I++SP E A
Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASA 60
Query: 59 PSRPVVEQLLARFNNMPEMEKSKKMMNQETYLKERVVKSQDQLKKNSRKNKVMEVSNLME 118
++ +E R+ + K + Q+ E+V D L K +E +
Sbjct: 61 STQKTIE----RYRTYTKENIGNKTVQQDI---EQVKADADGLAKK------LEALETYK 107
Query: 119 QFHLGKKTDDFNINELQGLVWLME 142
+ LG+K D+ +I EL L +E
Sbjct: 108 RKLLGEKLDECSIEELHSLEVKLE 131
>sp|O55087|MEF2B_MOUSE Myocyte-specific enhancer factor 2B OS=Mus musculus GN=Mef2b PE=1
SV=1
Length = 349
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIY 48
M RKK++++ I + R+ + KRK GL+KK EL+ LCD + +II+
Sbjct: 1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCDIALIIF 48
>sp|Q03413|MEF2D_XENLA Myocyte-specific enhancer factor 2D homolog OS=Xenopus laevis
GN=mef2d PE=1 SV=1
Length = 498
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIY 48
M RKK+++ I ++ R+ + KRK GL+KK EL+ LCD +II+
Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|A4UTP7|MEF2C_PIG Myocyte-specific enhancer factor 2C OS=Sus scrofa GN=MEF2C PE=2
SV=1
Length = 463
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIY 48
M RKK+++ I ++ R+ + KRK GL+KK EL+ LCD +II+
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|A2ICN5|MEF2A_PIG Myocyte-specific enhancer factor 2A OS=Sus scrofa GN=MEF2A PE=2
SV=2
Length = 507
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIY 48
M RKK+++ I ++ R+ + KRK GL+KK EL+ LCD +II+
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|Q5R444|MEF2C_PONAB Myocyte-specific enhancer factor 2C OS=Pongo abelii GN=MEF2C PE=2
SV=1
Length = 473
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIY 48
M RKK+++ I ++ R+ + KRK GL+KK EL+ LCD +II+
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|Q06413|MEF2C_HUMAN Myocyte-specific enhancer factor 2C OS=Homo sapiens GN=MEF2C PE=1
SV=1
Length = 473
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIY 48
M RKK+++ I ++ R+ + KRK GL+KK EL+ LCD +II+
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|Q8RYD9|TT16_ARATH Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1
SV=1
Length = 252
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSPDESEPAMWPS 60
M R K+++ I N +AR+ + KR+ GL+KK EL+ LCD + +I++S
Sbjct: 1 MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSE 60
Query: 61 RPVVEQLLARF 71
+ + QL+ R+
Sbjct: 61 QNRMPQLIDRY 71
>sp|Q39375|CAL_BRAOT Transcription factor CAULIFLOWER OS=Brassica oleracea var. italica
GN=CAL PE=2 SV=1
Length = 251
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 15/155 (9%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSPDESEPAMWPS 60
M R +V++ I N R+ + KR+ GLLKK E++ LCD +I++S + + + S
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFS-HKGKLFEYSS 59
Query: 61 RPVVEQLLARFNNMPEMEKSKKM----MNQETYLKERVVKSQDQLKKNSRKNKVMEVSNL 116
+E++L + EK K+ +N +T + + SR +E+
Sbjct: 60 ESCMEKVLEHYERYSYAEKQLKVPDSHVNAQT----------NWSVEYSRLKAKIELLER 109
Query: 117 MEQFHLGKKTDDFNINELQGLVWLMEERKKDLRKR 151
++ +LG+ + +I ELQ L ++ K +R R
Sbjct: 110 NQRHYLGEDLESISIKELQNLEQQLDTSLKHIRSR 144
>sp|Q60929|MEF2A_MOUSE Myocyte-specific enhancer factor 2A OS=Mus musculus GN=Mef2a PE=1
SV=2
Length = 498
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIY 48
M RKK+++ I ++ R+ + KRK GL+KK EL+ LCD +II+
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|Q2KIA0|MEF2C_BOVIN Myocyte-specific enhancer factor 2C OS=Bos taurus GN=MEF2C PE=2
SV=1
Length = 441
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIY 48
M RKK+++ I ++ R+ + KRK GL+KK EL+ LCD +II+
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|Q02080|MEF2B_HUMAN Myocyte-specific enhancer factor 2B OS=Homo sapiens GN=MEF2B PE=1
SV=2
Length = 365
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIY 48
M RKK++++ I + R+ + KRK GL+KK EL+ LCD +II+
Sbjct: 1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|Q8CFN5|MEF2C_MOUSE Myocyte-specific enhancer factor 2C OS=Mus musculus GN=Mef2c PE=1
SV=2
Length = 474
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIY 48
M RKK+++ I ++ R+ + KRK GL+KK EL+ LCD +II+
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|Q5REW7|MEF2A_PONAB Myocyte-specific enhancer factor 2A OS=Pongo abelii GN=MEF2A PE=2
SV=1
Length = 494
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIY 48
M RKK+++ I ++ R+ + KRK GL+KK EL+ LCD +II+
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|Q2MJT0|MEF2A_RAT Myocyte-specific enhancer factor 2A OS=Rattus norvegicus GN=Mef2a
PE=1 SV=1
Length = 495
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIY 48
M RKK+++ I ++ R+ + KRK GL+KK EL+ LCD +II+
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|Q02078|MEF2A_HUMAN Myocyte-specific enhancer factor 2A OS=Homo sapiens GN=MEF2A PE=1
SV=1
Length = 507
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIY 48
M RKK+++ I ++ R+ + KRK GL+KK EL+ LCD +II+
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|A2VDZ3|MEF2A_BOVIN Myocyte-specific enhancer factor 2A OS=Bos taurus GN=MEF2A PE=2
SV=1
Length = 492
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIY 48
M RKK+++ I ++ R+ + KRK GL+KK EL+ LCD +II+
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|Q38838|AGL14_ARATH Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana
GN=AGL14 PE=1 SV=2
Length = 221
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSP 50
M R K ++ I N ++R+ + KR+ GLLKK EL+ LCD +II+SP
Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSP 50
>sp|Q03414|MEF2A_XENLA Myocyte-specific enhancer factor 2A homolog OS=Xenopus laevis
GN=mef2a PE=1 SV=2
Length = 516
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIY 48
M RKK+++ I ++ R+ + KRK GL+KK EL+ LCD +II+
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|Q9W6U8|MEF2A_CHICK Myocyte-specific enhancer factor 2A OS=Gallus gallus GN=MEF2A
PE=2 SV=1
Length = 499
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIY 48
M RKK+++ I ++ R+ + KRK GL+KK EL+ LCD +II+
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIF 48
>sp|Q41274|AGL8_SINAL Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8
PE=2 SV=1
Length = 241
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 27/160 (16%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSPDESEPAMWPS 60
M R +V+L I N R+ + KR+ GLLKK E++ LCD ++I+S + + + +
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSS-KGKLFEYST 59
Query: 61 RPVVEQLLARFNNM---------PEMEKSKKMMNQETYLKERVVKSQDQLKKNSRKNKVM 111
+E++L R++ ++ +S+ + + LK RV + L+KN R
Sbjct: 60 DSCMEKILERYDRYLYSDKQLVGRDISQSENWVLEHAKLKARV----EVLEKNKR----- 110
Query: 112 EVSNLMEQFHLGKKTDDFNINELQGLVWLMEERKKDLRKR 151
N M G+ D ++ ELQ L + K +R R
Sbjct: 111 ---NFM-----GEDLDSLSLKELQSLEHQLHAAIKSIRSR 142
>sp|Q38841|AGL12_ARATH Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana
GN=AGL12 PE=2 SV=2
Length = 211
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSP 50
M R K++L I N R+ + KR+ GLLKK EL+ LCD ++I+SP
Sbjct: 1 MARGKIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSP 50
>sp|Q38847|AGL15_ARATH Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana
GN=AGL15 PE=1 SV=1
Length = 268
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSPDESEPAMWPS 60
M R K+++ I N ++R+ + KR+ GLLKK EL+ LCD +I++S +S S
Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFS--KSGKLFEYS 58
Query: 61 RPVVEQLLARFNN 73
++Q L+R+ N
Sbjct: 59 STGMKQTLSRYGN 71
>sp|A2Z9Q7|MAD56_ORYSI MADS-box transcription factor 56 OS=Oryza sativa subsp. indica
GN=MADS56 PE=2 SV=2
Length = 233
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 84/158 (53%), Gaps = 11/158 (6%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSPDESEPAMWPS 60
M R + +L I N ++R+ + KR+ GLLKK EL+ LCD +I++SP + S
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSP-RGRLYEFAS 59
Query: 61 RPVVEQLLARFNNMPEMEKSKKMMNQETYLKERVVKSQDQLKKNSRKNKVMEVSNLMEQF 120
P +++ + R+ +K +N +T +++ + + +D ++K + ++ S +
Sbjct: 60 APSLQKTIDRYKAY-----TKDHVNNKT-IQQDIQQVKDDTLGLAKKLEALDESR---RK 110
Query: 121 HLGKKTDDFNINELQGLVWLMEERKKDLR-KRMDYYEQ 157
LG+ + +I EL+GL +E+ ++R K+ + E+
Sbjct: 111 ILGENLEGCSIEELRGLEMKLEKSLHNIRLKKTELLER 148
>sp|P35632|AP3_ARATH Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3
PE=1 SV=1
Length = 232
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 27/158 (17%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSPDESEPAMWPS 60
M R K+++ I N + R+ + KR+ GL KK ELT LCD II++S
Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISP 60
Query: 61 RPVVEQLLARFNNMPEME----KSKKMMNQETYLKERVVKSQDQLKKNSRKNKVMEVS-N 115
++++ + + +++ + ++M QET K K++E + N
Sbjct: 61 NTTTKEIVDLYQTISDVDVWATQYERM--QET------------------KRKLLETNRN 100
Query: 116 LMEQF--HLGKKTDDFNINELQGLVWLMEERKKDLRKR 151
L Q LG+ D+ +I EL+ L ME K +R+R
Sbjct: 101 LRTQIKQRLGECLDELDIQELRRLEDEMENTFKLVRER 138
>sp|Q6R4R9|CALA_BRAOB Truncated transcription factor CAULIFLOWER A OS=Brassica oleracea
var. botrytis GN=CAL-A PE=2 SV=2
Length = 150
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 35/165 (21%)
Query: 1 MTRKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSPDESEPAMWPS 60
M R +V++ I N R+ + KR+ GLLKK E++ LCD +I++S + + + S
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSH-KGKLFEYSS 59
Query: 61 RPVVEQLLARFNNMPEMEKSKKMMNQETYLKERVVKSQDQLKK-----NSRKNKVMEVSN 115
+E++L R+ ER ++ QLK N++ N ME S
Sbjct: 60 ESCMEKVLERY--------------------ERYSYAEKQLKAPDSHVNAQTNWSMEYSR 99
Query: 116 LM---------EQFHLGKKTDDFNINELQGLVWLMEERKKDLRKR 151
L ++ +LG+ + +I ELQ L ++ K +R R
Sbjct: 100 LKAKIELWERNQRHYLGEDLESISIKELQNLEQQLDTSLKHIRSR 144
>sp|Q4PSU4|AGL61_ARATH Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana
GN=AGL61 PE=1 SV=1
Length = 264
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 3 RKKVKLNWIANDSARKASLKKRKVGLLKKVSELTTLCDVNAFIIIYSPDESEPAMWPSRP 62
R+K+ + I +S R+ + KR+ GL KK SEL TLC II++SP + + P
Sbjct: 64 RQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF--GHP 121
Query: 63 VVEQLLARF---NNM 74
VE +L R+ NNM
Sbjct: 122 SVESVLDRYVSRNNM 136
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.132 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 188,746,285
Number of Sequences: 539616
Number of extensions: 9434640
Number of successful extensions: 43302
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 238
Number of HSP's that attempted gapping in prelim test: 40378
Number of HSP's gapped (non-prelim): 2176
length of query: 446
length of database: 191,569,459
effective HSP length: 121
effective length of query: 325
effective length of database: 126,275,923
effective search space: 41039674975
effective search space used: 41039674975
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)