Your job contains 1 sequence.
>038850
MPQEAEEQNTETTRPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLAEKSAE
AAIEKKRKTIKLGDMRVA
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038850
(78 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2169238 - symbol:NF-YC13 ""nuclear factor Y, s... 181 4.9e-14 1
WB|WBGene00013150 - symbol:Y53F4B.3 species:6239 "Caenorh... 115 4.8e-07 1
FB|FBgn0034726 - symbol:Mes4 "Mesoderm-expressed 4" speci... 105 5.5e-06 1
DICTYBASE|DDB_G0272740 - symbol:DDB_G0272740 "putative hi... 102 1.1e-05 1
UNIPROTKB|E9PI99 - symbol:NFYC "Nuclear transcription fac... 96 5.0e-05 1
UNIPROTKB|Q5T6K7 - symbol:NFYC "Nuclear transcription fac... 96 5.0e-05 1
UNIPROTKB|E9PNC7 - symbol:DRAP1 "Dr1-associated corepress... 95 6.3e-05 1
FB|FBgn0034650 - symbol:NC2alpha "Negative Cofactor 2alph... 102 6.9e-05 1
TAIR|locus:2114555 - symbol:NF-YC1 ""nuclear factor Y, su... 99 7.1e-05 1
TAIR|locus:2010980 - symbol:NF-YC3 ""nuclear factor Y, su... 98 7.7e-05 1
TAIR|locus:2167306 - symbol:NF-YC4 ""nuclear factor Y, su... 99 8.2e-05 1
TAIR|locus:2036034 - symbol:NF-YC9 ""nuclear factor Y, su... 98 8.9e-05 1
ZFIN|ZDB-GENE-050227-18 - symbol:chrac1 "chromatin access... 93 0.00010 1
TAIR|locus:2159722 - symbol:NF-YC5 ""nuclear factor Y, su... 95 0.00011 1
UNIPROTKB|Q2YDP3 - symbol:DRAP1 "Dr1-associated corepress... 95 0.00014 1
UNIPROTKB|Q14919 - symbol:DRAP1 "Dr1-associated corepress... 95 0.00014 1
UNIPROTKB|F1RU28 - symbol:DRAP1 "Uncharacterized protein"... 95 0.00014 1
MGI|MGI:1913806 - symbol:Drap1 "Dr1 associated protein 1 ... 95 0.00014 1
RGD|1308477 - symbol:Drap1 "Dr1 associated protein 1 (neg... 95 0.00014 1
ZFIN|ZDB-GENE-030131-400 - symbol:drap1 "DR1-associated p... 95 0.00016 1
UNIPROTKB|C9JCC6 - symbol:DRAP1 "Dr1-associated corepress... 95 0.00016 1
TAIR|locus:2011776 - symbol:NF-YC2 ""nuclear factor Y, su... 94 0.00017 1
TAIR|locus:2205170 - symbol:NF-YC10 ""nuclear factor Y, s... 93 0.00024 1
TAIR|locus:2143315 - symbol:NF-YC8 ""nuclear factor Y, su... 92 0.00024 1
UNIPROTKB|Q5T6K5 - symbol:NFYC "Nuclear transcription fac... 96 0.00027 1
UNIPROTKB|E9PIG7 - symbol:NFYC "Nuclear transcription fac... 91 0.00028 1
UNIPROTKB|F8VWM3 - symbol:NFYC "Nuclear transcription fac... 96 0.00030 1
UNIPROTKB|Q5E9X1 - symbol:NFYC "Nuclear transcription fac... 96 0.00030 1
UNIPROTKB|F1Q380 - symbol:NFYC "Uncharacterized protein" ... 96 0.00030 1
UNIPROTKB|F1SF75 - symbol:NFYC "Uncharacterized protein" ... 96 0.00030 1
MGI|MGI:107901 - symbol:Nfyc "nuclear transcription facto... 96 0.00030 1
RGD|3173 - symbol:Nfyc "nuclear transcription factor-Y ga... 96 0.00030 1
UNIPROTKB|Q62725 - symbol:Nfyc "Nuclear transcription fac... 96 0.00030 1
UNIPROTKB|F1P0P8 - symbol:NFYC "Uncharacterized protein" ... 96 0.00031 1
ZFIN|ZDB-GENE-030131-2165 - symbol:nfyc "nuclear transcri... 96 0.00034 1
CGD|CAL0004217 - symbol:HFL2 species:5476 "Candida albica... 88 0.00035 1
UNIPROTKB|Q8W0W7 - symbol:DrAp1 "Repressor protein" speci... 93 0.00040 1
SGD|S000000961 - symbol:BUR6 "Subunit of a heterodimeric ... 87 0.00045 1
UNIPROTKB|Q13952 - symbol:NFYC "Nuclear transcription fac... 96 0.00049 1
POMBASE|SPAC17G8.03c - symbol:dpb3 "DNA polymerase epsilo... 90 0.00049 1
TAIR|locus:2101212 - symbol:NF-YC11 ""nuclear factor Y, s... 93 0.00051 1
FB|FBgn0043001 - symbol:Chrac-16 "Chromatin accessibility... 86 0.00057 1
ZFIN|ZDB-GENE-050522-309 - symbol:zgc:110337 "zgc:110337"... 88 0.00062 1
UNIPROTKB|A6QQ14 - symbol:POLE4 "DNA polymerase epsilon s... 85 0.00072 1
UNIPROTKB|Q9NR33 - symbol:POLE4 "DNA polymerase epsilon s... 85 0.00072 1
MGI|MGI:1914229 - symbol:Pole4 "polymerase (DNA-directed)... 85 0.00072 1
RGD|1307793 - symbol:Pole4 "polymerase (DNA-directed), ep... 85 0.00072 1
TAIR|locus:2159702 - symbol:NF-YC7 ""nuclear factor Y, su... 89 0.00075 1
>TAIR|locus:2169238 [details] [associations]
symbol:NF-YC13 ""nuclear factor Y, subunit C13""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0005622 Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AB017070
HSSP:Q13952 EMBL:AB493774 IPI:IPI00519531 RefSeq:NP_199139.1
UniGene:At.65631 ProteinModelPortal:Q9FHS0 SMR:Q9FHS0 PRIDE:Q9FHS0
EnsemblPlants:AT5G43250.1 GeneID:834343 KEGG:ath:AT5G43250
TAIR:At5g43250 eggNOG:NOG255369 HOGENOM:HOG000152474
InParanoid:Q9FHS0 OMA:GTRRIDD PhylomeDB:Q9FHS0
ProtClustDB:CLSN2686807 Genevestigator:Q9FHS0 Uniprot:Q9FHS0
Length = 130
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 35/72 (48%), Positives = 47/72 (65%)
Query: 7 EQNTETTRPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLXXXXXXXXXXXX 66
E+ + RPEFP+GRVKKI+KLD+DINK+ SEAL +++ STELFL FL
Sbjct: 2 EEEEGSIRPEFPIGRVKKIMKLDKDINKINSEALHVITYSTELFLHFLAEKSAVVTAEKK 61
Query: 67 XXTIKLGDMRVA 78
T+ L +R+A
Sbjct: 62 RKTVNLDHLRIA 73
>WB|WBGene00013150 [details] [associations]
symbol:Y53F4B.3 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 GO:GO:0043565 GO:GO:0005622 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0040027 GeneTree:ENSGT00530000067039
KO:K03506 EMBL:AL132949 HSSP:Q13952 RefSeq:NP_497087.1
ProteinModelPortal:Q9NAC5 SMR:Q9NAC5 IntAct:Q9NAC5 STRING:Q9NAC5
PaxDb:Q9NAC5 EnsemblMetazoa:Y53F4B.3.1 EnsemblMetazoa:Y53F4B.3.2
GeneID:175152 KEGG:cel:CELE_Y53F4B.3 UCSC:Y53F4B.3 CTD:175152
WormBase:Y53F4B.3 eggNOG:NOG304280 InParanoid:Q9NAC5 OMA:ALDGWPK
NextBio:886978 Uniprot:Q9NAC5
Length = 179
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 21/73 (28%), Positives = 42/73 (57%)
Query: 3 QEAEEQNTETTRPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLXXXXXXXX 62
+E EE E R + P+GRVKK+++++ D+ + +EAL +++++ ELF++ L
Sbjct: 22 REIEEHVEELVRSQLPLGRVKKVVRMNPDVEMLNNEALQLMAKAAELFIKELSNAANQNA 81
Query: 63 XXXXXXTIKLGDM 75
T++ D+
Sbjct: 82 ALEKRKTVQTKDI 94
>FB|FBgn0034726 [details] [associations]
symbol:Mes4 "Mesoderm-expressed 4" species:7227 "Drosophila
melanogaster" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IC]
[GO:0008622 "epsilon DNA polymerase complex" evidence=IC]
[GO:0005622 "intracellular" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IMP] InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 EMBL:AE013599 GO:GO:0005634
GO:GO:0043565 GO:GO:0006974 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0003887 KO:K03506 GeneTree:ENSGT00530000063560 HSSP:Q13952
FlyBase:FBgn0034726 EMBL:BT022745 RefSeq:NP_001163253.1
RefSeq:NP_611669.1 UniGene:Dm.18851 SMR:Q9W256 IntAct:Q9W256
MINT:MINT-940432 STRING:Q9W256 EnsemblMetazoa:FBtr0071827
EnsemblMetazoa:FBtr0301243 GeneID:37560 KEGG:dme:Dmel_CG11301
UCSC:CG11301-RA CTD:37560 InParanoid:Q9W256 OMA:QNDYSEE
GenomeRNAi:37560 NextBio:804289 Uniprot:Q9W256
Length = 155
Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 21/70 (30%), Positives = 38/70 (54%)
Query: 9 NTETTRPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLXXXXXXXXXXXXXX 68
+ E + P+ R++ I+KLD D++ +EA+FIV+++ ELF+ L
Sbjct: 70 DNEAKMTQLPLARIRNIMKLDPDLHMANNEAVFIVAKAVELFIASLSRESYTYTAQSKKK 129
Query: 69 TIKLGDMRVA 78
TI+ D+ +A
Sbjct: 130 TIQKRDVDMA 139
>DICTYBASE|DDB_G0272740 [details] [associations]
symbol:DDB_G0272740 "putative histone-like
transcription factor" species:44689 "Dictyostelium discoideum"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
dictyBase:DDB_G0272740 GO:GO:0005634 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AAFI02000008 eggNOG:COG5208
KO:K03506 RefSeq:XP_644985.1 ProteinModelPortal:Q7KWN0
STRING:Q7KWN0 PRIDE:Q7KWN0 EnsemblProtists:DDB0216394
GeneID:8618662 KEGG:ddi:DDB_G0272740 InParanoid:Q7KWN0 OMA:HETETDM
Uniprot:Q7KWN0
Length = 158
Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 16/39 (41%), Positives = 32/39 (82%)
Query: 16 EFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFL 54
+ PV R+K+I++ D+D+ ++S+A+ +V++STE+FL +L
Sbjct: 78 QLPVARIKRIMRCDKDVKIISSDAVMLVAKSTEMFLDYL 116
>UNIPROTKB|E9PI99 [details] [associations]
symbol:NFYC "Nuclear transcription factor Y subunit gamma"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0016602
"CCAAT-binding factor complex" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] InterPro:IPR003958
InterPro:IPR009072 InterPro:IPR027170 Pfam:PF00808 GO:GO:0043565
GO:GO:0005622 Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AC119677
PANTHER:PTHR10252:SF14 EMBL:AL031289 EMBL:AL354914 HGNC:HGNC:7806
ChiTaRS:NFYC IPI:IPI01015480 ProteinModelPortal:E9PI99 SMR:E9PI99
Ensembl:ENST00000525290 ArrayExpress:E9PI99 Bgee:E9PI99
Uniprot:E9PI99
Length = 141
Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 16 EFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLXXXXXXXXXXXXXXTIKLGDM 75
E P+ R+KKI+KLDED+ +++EA + +++ ++F+ L T++ D+
Sbjct: 42 ELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDI 101
Query: 76 RVA 78
+A
Sbjct: 102 AMA 104
>UNIPROTKB|Q5T6K7 [details] [associations]
symbol:NFYC "Nuclear transcription factor Y subunit gamma"
species:9606 "Homo sapiens" [GO:0016602 "CCAAT-binding factor
complex" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027170
Pfam:PF00808 GO:GO:0045893 GO:GO:0043565 GO:GO:0003700
GO:GO:0005622 Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AC119677
HOGENOM:HOG000200436 PANTHER:PTHR10252:SF14 EMBL:AL031289
EMBL:AL354914 UniGene:Hs.713051 HGNC:HGNC:7806 ChiTaRS:NFYC
IPI:IPI00979585 SMR:Q5T6K7 STRING:Q5T6K7 Ensembl:ENST00000453631
Uniprot:Q5T6K7
Length = 129
Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 16 EFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLXXXXXXXXXXXXXXTIKLGDM 75
E P+ R+KKI+KLDED+ +++EA + +++ ++F+ L T++ D+
Sbjct: 42 ELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDI 101
Query: 76 RVA 78
+A
Sbjct: 102 AMA 104
>UNIPROTKB|E9PNC7 [details] [associations]
symbol:DRAP1 "Dr1-associated corepressor" species:9606
"Homo sapiens" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 GO:GO:0005634
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AP006287
HGNC:HGNC:3019 ChiTaRS:DRAP1 IPI:IPI00981391
ProteinModelPortal:E9PNC7 SMR:E9PNC7 Ensembl:ENST00000525501
ArrayExpress:E9PNC7 Bgee:E9PNC7 Uniprot:E9PNC7
Length = 156
Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 1 MPQEAEEQNTETTRPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFL 54
MP + ++ N FP R+KKI++ DE+I KV + I+SR+ ELFL L
Sbjct: 1 MPSKKKKYNAR-----FPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESL 49
>FB|FBgn0034650 [details] [associations]
symbol:NC2alpha "Negative Cofactor 2alpha" species:7227
"Drosophila melanogaster" [GO:0017055 "negative regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=NAS] [GO:0017054 "negative cofactor 2 complex"
evidence=NAS] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IPI]
[GO:0005634 "nucleus" evidence=IC] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 GO:GO:0005634 GO:GO:0043565
GO:GO:0045944 GO:GO:0000122 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0051123 FlyBase:FBgn0034650 EMBL:AF302258 EMBL:AY118935
SMR:Q9GSP1 STRING:Q9GSP1 InParanoid:Q9GSP1 Uniprot:Q9GSP1
Length = 341
Score = 102 (41.0 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 25/76 (32%), Positives = 36/76 (47%)
Query: 1 MPQEAEEQNTETTRPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLXXXXXX 60
MP + ++ N FP GR+KKI++ DE+I KV I+SR+ ELF+ L
Sbjct: 1 MPSKKKKYNAR-----FPAGRIKKIMQSDEEIGKVAQAVPVIISRTLELFVESLLTKTLR 55
Query: 61 XXXXXXXXTIKLGDMR 76
T+ MR
Sbjct: 56 ITNARNAKTLSPSHMR 71
>TAIR|locus:2114555 [details] [associations]
symbol:NF-YC1 ""nuclear factor Y, subunit C1""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IC;ISS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0016602 "CCAAT-binding factor complex"
evidence=ISS] InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027170 Pfam:PF00808 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG5208
EMBL:AL133315 GO:GO:0016602 EMBL:AY092997 EMBL:BT001206
EMBL:AY086120 EMBL:Y13726 IPI:IPI00526430 PIR:T46203
RefSeq:NP_190428.1 UniGene:At.23009 ProteinModelPortal:Q9SMP0
SMR:Q9SMP0 IntAct:Q9SMP0 STRING:Q9SMP0 EnsemblPlants:AT3G48590.1
GeneID:824019 KEGG:ath:AT3G48590 GeneFarm:5141 TAIR:At3g48590
HOGENOM:HOG000200436 InParanoid:Q9SMP0 OMA:GGASYHH PhylomeDB:Q9SMP0
ProtClustDB:CLSN2684046 Genevestigator:Q9SMP0 GermOnline:AT3G48590
PANTHER:PTHR10252:SF6 Uniprot:Q9SMP0
Length = 234
Score = 99 (39.9 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 3 QEAEEQNTETTRPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLXXXXXXXX 62
QE E+ N + + P+ R+KKI+K DED+ +++EA + +++ ELF+ L
Sbjct: 53 QEIEQVN-DFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHA 111
Query: 63 XXXXXXTIKLGDMRVA 78
T++ D+ A
Sbjct: 112 EENKRRTLQKNDIAAA 127
>TAIR|locus:2010980 [details] [associations]
symbol:NF-YC3 ""nuclear factor Y, subunit C3""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027170
Pfam:PF00808 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:AC005388 EMBL:AC069144 eggNOG:COG5208
HOGENOM:HOG000200436 PANTHER:PTHR10252:SF6 EMBL:AY062775
EMBL:AY087517 EMBL:AY081654 IPI:IPI00522674 RefSeq:NP_175880.1
RefSeq:NP_849808.1 RefSeq:NP_974030.1 UniGene:At.10845
UniGene:At.28997 UniGene:At.48309 ProteinModelPortal:Q9ZVL3
SMR:Q9ZVL3 IntAct:Q9ZVL3 EnsemblPlants:AT1G54830.1
EnsemblPlants:AT1G54830.2 EnsemblPlants:AT1G54830.3 GeneID:841922
KEGG:ath:AT1G54830 GeneFarm:5143 TAIR:At1g54830 InParanoid:Q9ZVL3
OMA:QGQSSAM PhylomeDB:Q9ZVL3 ProtClustDB:CLSN2682430
Genevestigator:Q9ZVL3 GermOnline:AT1G54830 Uniprot:Q9ZVL3
Length = 217
Score = 98 (39.6 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 7 EQNTETTRPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLXXXXXXXXXXXX 66
E+ T+ P+ R+KKI+K DED+ +++EA + +R+ E+F+ L
Sbjct: 61 EKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENK 120
Query: 67 XXTIKLGDMRVA 78
T++ D+ A
Sbjct: 121 RRTLQKNDIAAA 132
>TAIR|locus:2167306 [details] [associations]
symbol:NF-YC4 ""nuclear factor Y, subunit C4""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IC] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009738 "abscisic acid mediated
signaling pathway" evidence=IMP] InterPro:IPR003958
InterPro:IPR009072 InterPro:IPR027170 Pfam:PF00808 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009738 EMBL:AB007649
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG5208 HOGENOM:HOG000200436
ProtClustDB:CLSN2684046 PANTHER:PTHR10252:SF6 UniGene:At.28997
EMBL:AY072402 EMBL:BT000218 IPI:IPI00541843 RefSeq:NP_001032130.1
RefSeq:NP_201152.1 UniGene:At.25414 UniGene:At.69059
ProteinModelPortal:Q9FMV5 SMR:Q9FMV5 IntAct:Q9FMV5 STRING:Q9FMV5
EnsemblPlants:AT5G63470.1 EnsemblPlants:AT5G63470.2 GeneID:836466
KEGG:ath:AT5G63470 GeneFarm:5144 TAIR:At5g63470 InParanoid:Q9FMV5
OMA:WQNSAGG PhylomeDB:Q9FMV5 Genevestigator:Q9FMV5
GermOnline:AT5G63470 Uniprot:Q9FMV5
Length = 250
Score = 99 (39.9 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 3 QEAEEQNTETTRPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLXXXXXXXX 62
QE E+ N + + P+ R+KKI+K DED+ +++EA + +++ ELF+ L
Sbjct: 66 QEIEQVN-DFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHA 124
Query: 63 XXXXXXTIKLGDMRVA 78
T++ D+ A
Sbjct: 125 EENKRRTLQKNDIAAA 140
>TAIR|locus:2036034 [details] [associations]
symbol:NF-YC9 ""nuclear factor Y, subunit C9""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027170 Pfam:PF00808 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AC000106 eggNOG:COG5208 HOGENOM:HOG000200436
PANTHER:PTHR10252:SF6 ProtClustDB:CLSN2682430 EMBL:AF193440
EMBL:AY126997 EMBL:AY143827 EMBL:AY085860 IPI:IPI00519904
PIR:E86221 RefSeq:NP_172371.1 RefSeq:NP_849619.1 RefSeq:NP_973796.1
RefSeq:NP_973797.1 UniGene:At.22258 ProteinModelPortal:Q8L4B2
SMR:Q8L4B2 IntAct:Q8L4B2 STRING:Q8L4B2 PRIDE:Q8L4B2
EnsemblPlants:AT1G08970.1 EnsemblPlants:AT1G08970.2
EnsemblPlants:AT1G08970.3 EnsemblPlants:AT1G08970.4 GeneID:837417
KEGG:ath:AT1G08970 GeneFarm:5149 TAIR:At1g08970 InParanoid:Q8L4B2
OMA:QAFWENQ PhylomeDB:Q8L4B2 Genevestigator:Q8L4B2
GermOnline:AT1G08970 Uniprot:Q8L4B2
Length = 231
Score = 98 (39.6 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 7 EQNTETTRPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLXXXXXXXXXXXX 66
E+ T+ P+ R+KKI+K DED+ +++EA + +R+ E+F+ L
Sbjct: 71 EKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENK 130
Query: 67 XXTIKLGDMRVA 78
T++ D+ A
Sbjct: 131 RRTLQKNDIAAA 142
>ZFIN|ZDB-GENE-050227-18 [details] [associations]
symbol:chrac1 "chromatin accessibility complex 1"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 ZFIN:ZDB-GENE-050227-18
GO:GO:0043565 GO:GO:0005622 Gene3D:1.10.20.10 SUPFAM:SSF47113
CTD:54108 eggNOG:COG5208 HOGENOM:HOG000068045 HOVERGEN:HBG050946
KO:K11656 OMA:TELFVQC OrthoDB:EOG4NKBX4
GeneTree:ENSGT00510000048543 EMBL:CU896645 EMBL:BC090283
IPI:IPI00554414 RefSeq:NP_001013311.1 UniGene:Dr.76531
STRING:Q5EAR4 Ensembl:ENSDART00000062080 GeneID:503606
KEGG:dre:503606 InParanoid:Q5EAR4 NextBio:20866240 Uniprot:Q5EAR4
Length = 114
Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
Identities = 18/73 (24%), Positives = 36/73 (49%)
Query: 3 QEAEEQNTETTRPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLXXXXXXXX 62
+E +Q + P+ RV+ I+K D++ + +ALF+ +++TELF++ L
Sbjct: 2 EETVDQAANSRTISLPISRVRLIMKSSPDVSCINQDALFLTTKATELFVQHLALSSYENG 61
Query: 63 XXXXXXTIKLGDM 75
T+ D+
Sbjct: 62 PSKDTNTLSYSDL 74
>TAIR|locus:2159722 [details] [associations]
symbol:NF-YC5 ""nuclear factor Y, subunit C5""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113
eggNOG:COG5208 HOGENOM:HOG000200436 EMBL:AB025619 EMBL:BX833977
IPI:IPI00546527 RefSeq:NP_199860.1 UniGene:At.49789
ProteinModelPortal:Q9FGP6 SMR:Q9FGP6 IntAct:Q9FGP6 STRING:Q9FGP6
PaxDb:Q9FGP6 PRIDE:Q9FGP6 EnsemblPlants:AT5G50490.1 GeneID:835117
KEGG:ath:AT5G50490 GeneFarm:5145 TAIR:At5g50490 InParanoid:Q9FGP6
OMA:KNHEFPI PhylomeDB:Q9FGP6 ProtClustDB:CLSN2687145
Genevestigator:Q9FGP6 Uniprot:Q9FGP6
Length = 186
Score = 95 (38.5 bits), Expect = 0.00011, P = 0.00011
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 16 EFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLXXXXXXXXXXXXXXTIKLGDM 75
EFP+ R+K+I+K D D++ + +EA ++S++ E+F+ L TI+ D+
Sbjct: 36 EFPISRIKRIMKFDPDVSMIAAEAPNLLSKACEMFVMDLTMRSWLHAQESNRLTIRKSDV 95
>UNIPROTKB|Q2YDP3 [details] [associations]
symbol:DRAP1 "Dr1-associated corepressor" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
GO:GO:0005634 GO:GO:0003714 GO:GO:0043565 GO:GO:0006351
GO:GO:0000122 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG5247
EMBL:BC110127 IPI:IPI00690116 RefSeq:NP_001069682.1
UniGene:Bt.21122 ProteinModelPortal:Q2YDP3 SMR:Q2YDP3 STRING:Q2YDP3
PRIDE:Q2YDP3 Ensembl:ENSBTAT00000008142 GeneID:540345
KEGG:bta:540345 CTD:10589 GeneTree:ENSGT00390000012424
HOGENOM:HOG000113741 HOVERGEN:HBG051403 InParanoid:Q2YDP3
OMA:MGSKGKD OrthoDB:EOG4XD3SF NextBio:20878575 Uniprot:Q2YDP3
Length = 205
Score = 95 (38.5 bits), Expect = 0.00014, P = 0.00014
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 1 MPQEAEEQNTETTRPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFL 54
MP + ++ N FP R+KKI++ DE+I KV + I+SR+ ELFL L
Sbjct: 1 MPSKKKKYNAR-----FPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESL 49
>UNIPROTKB|Q14919 [details] [associations]
symbol:DRAP1 "Dr1-associated corepressor" species:9606
"Homo sapiens" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
GO:GO:0005634 GO:GO:0003714 GO:GO:0003677 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG5247 CTD:10589 HOGENOM:HOG000113741
HOVERGEN:HBG051403 OrthoDB:EOG4XD3SF EMBL:X96506 EMBL:U41843
EMBL:BC010025 IPI:IPI00003084 IPI:IPI00477494 PIR:S70618
RefSeq:NP_006433.2 UniGene:Hs.356742 PDB:1JFI PDBsum:1JFI
ProteinModelPortal:Q14919 SMR:Q14919 IntAct:Q14919
MINT:MINT-1421885 STRING:Q14919 PhosphoSite:Q14919 DMDM:56404465
PaxDb:Q14919 PRIDE:Q14919 DNASU:10589 Ensembl:ENST00000312515
GeneID:10589 KEGG:hsa:10589 UCSC:uc001ogj.2 GeneCards:GC11P065686
HGNC:HGNC:3019 HPA:HPA006790 MIM:602289 neXtProt:NX_Q14919
PharmGKB:PA27476 PhylomeDB:Q14919 ChiTaRS:DRAP1
EvolutionaryTrace:Q14919 GenomeRNAi:10589 NextBio:40211
ArrayExpress:Q14919 Bgee:Q14919 CleanEx:HS_DRAP1
Genevestigator:Q14919 GermOnline:ENSG00000175550 Uniprot:Q14919
Length = 205
Score = 95 (38.5 bits), Expect = 0.00014, P = 0.00014
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 1 MPQEAEEQNTETTRPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFL 54
MP + ++ N FP R+KKI++ DE+I KV + I+SR+ ELFL L
Sbjct: 1 MPSKKKKYNAR-----FPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESL 49
>UNIPROTKB|F1RU28 [details] [associations]
symbol:DRAP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
GO:GO:0005634 GO:GO:0003714 GO:GO:0043565 GO:GO:0000122
Gene3D:1.10.20.10 SUPFAM:SSF47113 GeneTree:ENSGT00390000012424
OMA:MGSKGKD EMBL:CU928325 RefSeq:XP_003122566.1 UniGene:Ssc.19168
Ensembl:ENSSSCT00000014172 GeneID:100525028 KEGG:ssc:100525028
Uniprot:F1RU28
Length = 205
Score = 95 (38.5 bits), Expect = 0.00014, P = 0.00014
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 1 MPQEAEEQNTETTRPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFL 54
MP + ++ N FP R+KKI++ DE+I KV + I+SR+ ELFL L
Sbjct: 1 MPSKKKKYNAR-----FPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESL 49
>MGI|MGI:1913806 [details] [associations]
symbol:Drap1 "Dr1 associated protein 1 (negative cofactor 2
alpha)" species:10090 "Mus musculus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 MGI:MGI:1913806
GO:GO:0005634 GO:GO:0003714 GO:GO:0043565 GO:GO:0006351
GO:GO:0000122 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0008134
eggNOG:COG5247 CTD:10589 GeneTree:ENSGT00390000012424
HOGENOM:HOG000113741 HOVERGEN:HBG051403 OrthoDB:EOG4XD3SF
EMBL:AK010152 EMBL:AK087456 EMBL:BC002090 IPI:IPI00109312
RefSeq:NP_077138.1 UniGene:Mm.275446 ProteinModelPortal:Q9D6N5
SMR:Q9D6N5 STRING:Q9D6N5 PhosphoSite:Q9D6N5 PaxDb:Q9D6N5
PRIDE:Q9D6N5 Ensembl:ENSMUST00000025853 GeneID:66556 KEGG:mmu:66556
NextBio:322002 Bgee:Q9D6N5 Genevestigator:Q9D6N5
GermOnline:ENSMUSG00000024914 Uniprot:Q9D6N5
Length = 205
Score = 95 (38.5 bits), Expect = 0.00014, P = 0.00014
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 1 MPQEAEEQNTETTRPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFL 54
MP + ++ N FP R+KKI++ DE+I KV + I+SR+ ELFL L
Sbjct: 1 MPSKKKKYNAR-----FPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESL 49
>RGD|1308477 [details] [associations]
symbol:Drap1 "Dr1 associated protein 1 (negative cofactor 2
alpha)" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 RGD:1308477
GO:GO:0005634 GO:GO:0003714 GO:GO:0043565 GO:GO:0006351
GO:GO:0000122 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG5247
CTD:10589 GeneTree:ENSGT00390000012424 HOGENOM:HOG000113741
HOVERGEN:HBG051403 OMA:MGSKGKD OrthoDB:EOG4XD3SF EMBL:BC127524
IPI:IPI00206162 RefSeq:NP_001071136.1 UniGene:Rn.40582
ProteinModelPortal:A0JPP1 SMR:A0JPP1 STRING:A0JPP1 PRIDE:A0JPP1
Ensembl:ENSRNOT00000038138 GeneID:293674 KEGG:rno:293674
UCSC:RGD:1308477 InParanoid:A0JPP1 NextBio:636708
Genevestigator:A0JPP1 Uniprot:A0JPP1
Length = 205
Score = 95 (38.5 bits), Expect = 0.00014, P = 0.00014
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 1 MPQEAEEQNTETTRPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFL 54
MP + ++ N FP R+KKI++ DE+I KV + I+SR+ ELFL L
Sbjct: 1 MPSKKKKYNAR-----FPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESL 49
>ZFIN|ZDB-GENE-030131-400 [details] [associations]
symbol:drap1 "DR1-associated protein 1 (negative
cofactor 2 alpha)" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 ZFIN:ZDB-GENE-030131-400
GO:GO:0005634 GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113
eggNOG:COG5247 CTD:10589 HOGENOM:HOG000113741 OrthoDB:EOG4XD3SF
HSSP:Q13952 EMBL:BC045853 EMBL:BC065342 IPI:IPI00504618
RefSeq:NP_991104.1 UniGene:Dr.719 SMR:Q7ZVI1 STRING:Q7ZVI1
GeneID:321681 KEGG:dre:321681 NextBio:20807482 Uniprot:Q7ZVI1
Length = 211
Score = 95 (38.5 bits), Expect = 0.00016, P = 0.00016
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 1 MPQEAEEQNTETTRPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFL 54
MP + ++ N FP R+KKI++ DE+I KV + I+SR+ ELFL L
Sbjct: 1 MPSKKKKYNAR-----FPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESL 49
>UNIPROTKB|C9JCC6 [details] [associations]
symbol:DRAP1 "Dr1-associated corepressor" species:9606
"Homo sapiens" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 GO:GO:0005634
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AP006287
HOGENOM:HOG000113741 OMA:MGSKGKD IPI:IPI00477494 HGNC:HGNC:3019
ChiTaRS:DRAP1 ProteinModelPortal:C9JCC6 SMR:C9JCC6 STRING:C9JCC6
PRIDE:C9JCC6 Ensembl:ENST00000376991 ArrayExpress:C9JCC6
Bgee:C9JCC6 Uniprot:C9JCC6
Length = 212
Score = 95 (38.5 bits), Expect = 0.00016, P = 0.00016
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 1 MPQEAEEQNTETTRPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFL 54
MP + ++ N FP R+KKI++ DE+I KV + I+SR+ ELFL L
Sbjct: 1 MPSKKKKYNAR-----FPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESL 49
>TAIR|locus:2011776 [details] [associations]
symbol:NF-YC2 ""nuclear factor Y, subunit C2""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0016602 "CCAAT-binding factor complex" evidence=ISS]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027170
Pfam:PF00808 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005737
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AC069159 eggNOG:COG5208
GO:GO:0016602 EMBL:AC009894 HOGENOM:HOG000200436
PANTHER:PTHR10252:SF6 EMBL:AY072411 EMBL:AY114704 EMBL:AY086605
EMBL:Y13725 IPI:IPI00532958 PIR:B96603 RefSeq:NP_001077726.1
RefSeq:NP_176013.1 UniGene:At.25413 ProteinModelPortal:Q8LCG7
SMR:Q8LCG7 IntAct:Q8LCG7 STRING:Q8LCG7 PaxDb:Q8LCG7 PRIDE:Q8LCG7
EnsemblPlants:AT1G56170.1 EnsemblPlants:AT1G56170.2 GeneID:842070
KEGG:ath:AT1G56170 GeneFarm:5142 TAIR:At1g56170 InParanoid:Q8LCG7
OMA:QEIEHTT PhylomeDB:Q8LCG7 ProtClustDB:CLSN2682880
Genevestigator:Q8LCG7 GermOnline:AT1G56170 Uniprot:Q8LCG7
Length = 199
Score = 94 (38.1 bits), Expect = 0.00017, P = 0.00017
Identities = 20/72 (27%), Positives = 36/72 (50%)
Query: 7 EQNTETTRPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLXXXXXXXXXXXX 66
E T+ P+ R+KKI+K DED+ +++EA I +++ E+F+ L
Sbjct: 67 EHTTDFKNHTLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRAWIHTEENK 126
Query: 67 XXTIKLGDMRVA 78
T++ D+ A
Sbjct: 127 RRTLQKNDIAAA 138
>TAIR|locus:2205170 [details] [associations]
symbol:NF-YC10 ""nuclear factor Y, subunit C10""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
EMBL:CP002684 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AC026875 EMBL:AY086815
EMBL:BT025266 IPI:IPI00527526 RefSeq:NP_563803.1 UniGene:At.15420
ProteinModelPortal:Q9LN09 SMR:Q9LN09 IntAct:Q9LN09 STRING:Q9LN09
EnsemblPlants:AT1G07980.1 GeneID:837313 KEGG:ath:AT1G07980
TAIR:At1g07980 InParanoid:Q9LN09 OMA:NRIRRIM PhylomeDB:Q9LN09
ProtClustDB:CLSN2718115 Genevestigator:Q9LN09 Uniprot:Q9LN09
Length = 206
Score = 93 (37.8 bits), Expect = 0.00024, P = 0.00024
Identities = 15/52 (28%), Positives = 36/52 (69%)
Query: 3 QEAEEQNTETTRPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFL-RF 53
+E ++ E + +FP+ R+++I++ D ++ +A+F+V+++TE+F+ RF
Sbjct: 96 REEDDGGAEDAKIKFPMNRIRRIMRSDNSAPQIMQDAVFLVNKATEMFIERF 147
>TAIR|locus:2143315 [details] [associations]
symbol:NF-YC8 ""nuclear factor Y, subunit C8""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AC007627 eggNOG:COG5208 HOGENOM:HOG000200436
ProtClustDB:CLSN2687145 EMBL:AC007399 EMBL:DQ056694 IPI:IPI00541534
RefSeq:NP_198143.1 UniGene:At.62434 ProteinModelPortal:Q4PSE2
SMR:Q4PSE2 EnsemblPlants:AT5G27910.1 GeneID:832857
KEGG:ath:AT5G27910 GeneFarm:5148 TAIR:At5g27910 InParanoid:Q4PSE2
OMA:IGTPVCC PhylomeDB:Q4PSE2 ArrayExpress:Q4PSE2
Genevestigator:Q4PSE2 GermOnline:AT5G27910 Uniprot:Q4PSE2
Length = 187
Score = 92 (37.4 bits), Expect = 0.00024, P = 0.00024
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 7 EQNTETTRPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFL 51
E N + + P+ R+KKI+K D D+ + SEA ++S++ E+F+
Sbjct: 27 EGNLDFKNHDLPITRIKKIMKYDPDVTMIASEAPILLSKACEMFI 71
>UNIPROTKB|Q5T6K5 [details] [associations]
symbol:NFYC "Nuclear transcription factor Y subunit gamma"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0016602
"CCAAT-binding factor complex" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] InterPro:IPR003958
InterPro:IPR009072 InterPro:IPR027170 Pfam:PF00808 GO:GO:0005634
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AC119677
HOVERGEN:HBG002885 PANTHER:PTHR10252:SF14 EMBL:AL031289
EMBL:AL354914 UniGene:Hs.713051 HGNC:HGNC:7806 ChiTaRS:NFYC
IPI:IPI00513906 SMR:Q5T6K5 STRING:Q5T6K5 Ensembl:ENST00000372669
HOGENOM:HOG000202196 Uniprot:Q5T6K5
Length = 313
Score = 96 (38.9 bits), Expect = 0.00027, P = 0.00027
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 16 EFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLXXXXXXXXXXXXXXTIKLGDM 75
E P+ R+KKI+KLDED+ +++EA + +++ ++F+ L T++ D+
Sbjct: 42 ELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDI 101
Query: 76 RVA 78
+A
Sbjct: 102 AMA 104
>UNIPROTKB|E9PIG7 [details] [associations]
symbol:NFYC "Nuclear transcription factor Y subunit gamma"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0016602
"CCAAT-binding factor complex" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] InterPro:IPR003958
InterPro:IPR009072 InterPro:IPR027170 Pfam:PF00808 GO:GO:0005634
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AC119677
PANTHER:PTHR10252:SF14 EMBL:AL031289 EMBL:AL354914 HGNC:HGNC:7806
ChiTaRS:NFYC IPI:IPI00644539 ProteinModelPortal:E9PIG7 SMR:E9PIG7
Ensembl:ENST00000416859 ArrayExpress:E9PIG7 Bgee:E9PIG7
Uniprot:E9PIG7
Length = 180
Score = 91 (37.1 bits), Expect = 0.00028, P = 0.00028
Identities = 14/36 (38%), Positives = 28/36 (77%)
Query: 16 EFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFL 51
E P+ R+KKI+KLDED+ +++EA + +++ ++F+
Sbjct: 42 ELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFI 77
>UNIPROTKB|F8VWM3 [details] [associations]
symbol:NFYC "Nuclear transcription factor Y subunit gamma"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0016602
"CCAAT-binding factor complex" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] InterPro:IPR003958
InterPro:IPR009072 InterPro:IPR027170 Pfam:PF00808 GO:GO:0005634
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AC119677
CTD:4802 KO:K08066 PANTHER:PTHR10252:SF14 EMBL:AL031289
EMBL:AL354914 RefSeq:NP_001136059.1 UniGene:Hs.713051 DNASU:4802
GeneID:4802 KEGG:hsa:4802 HGNC:HGNC:7806 ChiTaRS:NFYC
GenomeRNAi:4802 NextBio:18510 IPI:IPI00645066
ProteinModelPortal:F8VWM3 SMR:F8VWM3 PRIDE:F8VWM3
Ensembl:ENST00000456393 UCSC:uc001cfz.3 ArrayExpress:F8VWM3
Bgee:F8VWM3 Uniprot:F8VWM3
Length = 334
Score = 96 (38.9 bits), Expect = 0.00030, P = 0.00030
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 16 EFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLXXXXXXXXXXXXXXTIKLGDM 75
E P+ R+KKI+KLDED+ +++EA + +++ ++F+ L T++ D+
Sbjct: 42 ELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDI 101
Query: 76 RVA 78
+A
Sbjct: 102 AMA 104
>UNIPROTKB|Q5E9X1 [details] [associations]
symbol:NFYC "Nuclear transcription factor Y subunit gamma"
species:9913 "Bos taurus" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016602
"CCAAT-binding factor complex" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027170 Pfam:PF00808 GO:GO:0045893 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113
eggNOG:COG5208 GeneTree:ENSGT00530000063560 GO:GO:0016602
EMBL:BT020742 EMBL:BT020799 IPI:IPI00696856 RefSeq:NP_001029770.1
UniGene:Bt.55532 ProteinModelPortal:Q5E9X1 SMR:Q5E9X1 STRING:Q5E9X1
PRIDE:Q5E9X1 Ensembl:ENSBTAT00000029254 GeneID:534003
KEGG:bta:534003 CTD:4802 HOGENOM:HOG000231074 HOVERGEN:HBG002885
InParanoid:Q5E9X1 KO:K08066 OrthoDB:EOG495ZSS NextBio:20876228
ArrayExpress:Q5E9X1 PANTHER:PTHR10252:SF14 Uniprot:Q5E9X1
Length = 335
Score = 96 (38.9 bits), Expect = 0.00030, P = 0.00030
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 16 EFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLXXXXXXXXXXXXXXTIKLGDM 75
E P+ R+KKI+KLDED+ +++EA + +++ ++F+ L T++ D+
Sbjct: 42 ELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDI 101
Query: 76 RVA 78
+A
Sbjct: 102 AMA 104
>UNIPROTKB|F1Q380 [details] [associations]
symbol:NFYC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016602
"CCAAT-binding factor complex" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027170 Pfam:PF00808 GO:GO:0045893 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.20.10 SUPFAM:SSF47113
GeneTree:ENSGT00530000063560 GO:GO:0016602 CTD:4802 KO:K08066
PANTHER:PTHR10252:SF14 OMA:ATNAQQI EMBL:AAEX03009558
RefSeq:XP_856053.1 Ensembl:ENSCAFT00000004517 GeneID:475312
KEGG:cfa:475312 Uniprot:F1Q380
Length = 335
Score = 96 (38.9 bits), Expect = 0.00030, P = 0.00030
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 16 EFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLXXXXXXXXXXXXXXTIKLGDM 75
E P+ R+KKI+KLDED+ +++EA + +++ ++F+ L T++ D+
Sbjct: 42 ELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDI 101
Query: 76 RVA 78
+A
Sbjct: 102 AMA 104
>UNIPROTKB|F1SF75 [details] [associations]
symbol:NFYC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016602 "CCAAT-binding factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR003958
InterPro:IPR009072 InterPro:IPR027170 Pfam:PF00808 GO:GO:0045893
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.20.10 SUPFAM:SSF47113
GeneTree:ENSGT00530000063560 GO:GO:0016602 KO:K08066
PANTHER:PTHR10252:SF14 OMA:ATNAQQI EMBL:CU466467
RefSeq:XP_003128155.1 UniGene:Ssc.21820 Ensembl:ENSSSCT00000004398
GeneID:100525647 KEGG:ssc:100525647 Uniprot:F1SF75
Length = 335
Score = 96 (38.9 bits), Expect = 0.00030, P = 0.00030
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 16 EFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLXXXXXXXXXXXXXXTIKLGDM 75
E P+ R+KKI+KLDED+ +++EA + +++ ++F+ L T++ D+
Sbjct: 42 ELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDI 101
Query: 76 RVA 78
+A
Sbjct: 102 AMA 104
>MGI|MGI:107901 [details] [associations]
symbol:Nfyc "nuclear transcription factor-Y gamma"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=IC] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0016602 "CCAAT-binding factor
complex" evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] Reactome:REACT_112621
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027170
Pfam:PF00808 MGI:MGI:107901 GO:GO:0045893 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG5208
GeneTree:ENSGT00530000063560 GO:GO:0016602 CTD:4802
HOGENOM:HOG000231074 HOVERGEN:HBG002885 KO:K08066 OrthoDB:EOG495ZSS
PANTHER:PTHR10252:SF14 OMA:ATNAQQI ChiTaRS:NFYC EMBL:U62297
EMBL:AB006181 EMBL:BC020117 EMBL:BC085261 IPI:IPI00108204
RefSeq:NP_001041633.1 RefSeq:NP_032718.2 UniGene:Mm.435590
UniGene:Mm.477613 ProteinModelPortal:P70353 SMR:P70353
IntAct:P70353 STRING:P70353 PhosphoSite:P70353 PaxDb:P70353
PRIDE:P70353 Ensembl:ENSMUST00000043429 Ensembl:ENSMUST00000097906
Ensembl:ENSMUST00000118902 Ensembl:ENSMUST00000120779 GeneID:18046
KEGG:mmu:18046 InParanoid:P70353 NextBio:293165 Bgee:P70353
CleanEx:MM_NFYC Genevestigator:P70353 GermOnline:ENSMUSG00000032897
Uniprot:P70353
Length = 335
Score = 96 (38.9 bits), Expect = 0.00030, P = 0.00030
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 16 EFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLXXXXXXXXXXXXXXTIKLGDM 75
E P+ R+KKI+KLDED+ +++EA + +++ ++F+ L T++ D+
Sbjct: 42 ELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDI 101
Query: 76 RVA 78
+A
Sbjct: 102 AMA 104
>RGD|3173 [details] [associations]
symbol:Nfyc "nuclear transcription factor-Y gamma" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0016602 "CCAAT-binding factor complex" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027170 Pfam:PF00808 RGD:3173 GO:GO:0045893 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113
eggNOG:COG5208 GeneTree:ENSGT00530000063560 GO:GO:0016602 CTD:4802
HOGENOM:HOG000231074 HOVERGEN:HBG002885 KO:K08066 OrthoDB:EOG495ZSS
PANTHER:PTHR10252:SF14 OMA:ATNAQQI EMBL:U17607 EMBL:BC093619
IPI:IPI00208090 PIR:I59348 RefSeq:NP_036998.1 UniGene:Rn.1457
ProteinModelPortal:Q62725 SMR:Q62725 DIP:DIP-2662N STRING:Q62725
PRIDE:Q62725 Ensembl:ENSRNOT00000056651 GeneID:25337 KEGG:rno:25337
UCSC:RGD:3173 InParanoid:Q62725 NextBio:606235 ArrayExpress:Q62725
Genevestigator:Q62725 GermOnline:ENSRNOG00000010735 Uniprot:Q62725
Length = 335
Score = 96 (38.9 bits), Expect = 0.00030, P = 0.00030
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 16 EFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLXXXXXXXXXXXXXXTIKLGDM 75
E P+ R+KKI+KLDED+ +++EA + +++ ++F+ L T++ D+
Sbjct: 42 ELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDI 101
Query: 76 RVA 78
+A
Sbjct: 102 AMA 104
>UNIPROTKB|Q62725 [details] [associations]
symbol:Nfyc "Nuclear transcription factor Y subunit gamma"
species:10116 "Rattus norvegicus" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] InterPro:IPR003958
InterPro:IPR009072 InterPro:IPR027170 Pfam:PF00808 RGD:3173
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG5208
GeneTree:ENSGT00530000063560 GO:GO:0016602 CTD:4802
HOGENOM:HOG000231074 HOVERGEN:HBG002885 KO:K08066 OrthoDB:EOG495ZSS
PANTHER:PTHR10252:SF14 OMA:ATNAQQI EMBL:U17607 EMBL:BC093619
IPI:IPI00208090 PIR:I59348 RefSeq:NP_036998.1 UniGene:Rn.1457
ProteinModelPortal:Q62725 SMR:Q62725 DIP:DIP-2662N STRING:Q62725
PRIDE:Q62725 Ensembl:ENSRNOT00000056651 GeneID:25337 KEGG:rno:25337
UCSC:RGD:3173 InParanoid:Q62725 NextBio:606235 ArrayExpress:Q62725
Genevestigator:Q62725 GermOnline:ENSRNOG00000010735 Uniprot:Q62725
Length = 335
Score = 96 (38.9 bits), Expect = 0.00030, P = 0.00030
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 16 EFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLXXXXXXXXXXXXXXTIKLGDM 75
E P+ R+KKI+KLDED+ +++EA + +++ ++F+ L T++ D+
Sbjct: 42 ELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDI 101
Query: 76 RVA 78
+A
Sbjct: 102 AMA 104
>UNIPROTKB|F1P0P8 [details] [associations]
symbol:NFYC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0016602 "CCAAT-binding factor complex"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027170 Pfam:PF00808 GO:GO:0045893 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.20.10 SUPFAM:SSF47113
GeneTree:ENSGT00530000063560 GO:GO:0016602 PANTHER:PTHR10252:SF14
OMA:ATNAQQI EMBL:AADN02043797 IPI:IPI00810859
Ensembl:ENSGALT00000035036 Uniprot:F1P0P8
Length = 338
Score = 96 (38.9 bits), Expect = 0.00031, P = 0.00031
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 16 EFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLXXXXXXXXXXXXXXTIKLGDM 75
E P+ R+KKI+KLDED+ +++EA + +++ ++F+ L T++ D+
Sbjct: 45 ELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDI 104
Query: 76 RVA 78
+A
Sbjct: 105 AMA 107
>ZFIN|ZDB-GENE-030131-2165 [details] [associations]
symbol:nfyc "nuclear transcription factor Y,
gamma" species:7955 "Danio rerio" [GO:0016602 "CCAAT-binding factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027170 Pfam:PF00808 ZFIN:ZDB-GENE-030131-2165
GO:GO:0005634 GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0060041 CTD:4802 HOVERGEN:HBG002885 KO:K08066
PANTHER:PTHR10252:SF14 HSSP:Q13952 EMBL:BC045364 IPI:IPI00505803
RefSeq:NP_955933.1 UniGene:Dr.157 ProteinModelPortal:Q7ZVY3
SMR:Q7ZVY3 PRIDE:Q7ZVY3 GeneID:323445 KEGG:dre:323445
NextBio:20808252 Bgee:Q7ZVY3 Uniprot:Q7ZVY3
Length = 360
Score = 96 (38.9 bits), Expect = 0.00034, P = 0.00034
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 16 EFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLXXXXXXXXXXXXXXTIKLGDM 75
E P+ R+KKI+KLDED+ +++EA + +++ ++F+ L T++ D+
Sbjct: 40 ELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDI 99
Query: 76 RVA 78
+A
Sbjct: 100 AMA 102
>CGD|CAL0004217 [details] [associations]
symbol:HFL2 species:5476 "Candida albicans" [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0017054
"negative cofactor 2 complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 CGD:CAL0004217 GO:GO:0005634
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AACQ01000023
EMBL:AACQ01000025 eggNOG:COG5247 RefSeq:XP_720255.1
RefSeq:XP_720486.1 ProteinModelPortal:Q5AF72 STRING:Q5AF72
GeneID:3637833 GeneID:3638144 KEGG:cal:CaO19.10250
KEGG:cal:CaO19.2736 Uniprot:Q5AF72
Length = 146
Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 11 ETTRPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFL 51
E + FP R+KKI++ DE+I KV IV R+ E+F+
Sbjct: 57 EKIKTHFPAARIKKIMQSDEEIGKVAQATPVIVGRALEIFM 97
>UNIPROTKB|Q8W0W7 [details] [associations]
symbol:DrAp1 "Repressor protein" species:4530 "Oryza
sativa" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 GO:GO:0005634
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 HSSP:Q13952
EMBL:AF464904 ProteinModelPortal:Q8W0W7 IntAct:Q8W0W7
KEGG:dosa:Os11t0544700-01 Gramene:Q8W0W7 Genevestigator:Q8W0W7
Uniprot:Q8W0W7
Length = 258
Score = 93 (37.8 bits), Expect = 0.00040, P = 0.00040
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 17 FPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFL 54
FP R+KKI++ DED+ K+ +VSR+ ELFL+ L
Sbjct: 9 FPAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDL 46
>SGD|S000000961 [details] [associations]
symbol:BUR6 "Subunit of a heterodimeric NC2 transcription
regulator complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IPI] [GO:0017054 "negative
cofactor 2 complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IMP] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IMP] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 SGD:S000000961 GO:GO:0003714 GO:GO:0043565
GO:GO:0045944 GO:GO:0006351 GO:GO:0000122 GO:GO:0003713
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:BK006939 EMBL:U18917
RefSeq:NP_011086.3 GeneID:856904 KEGG:sce:YER159C eggNOG:COG5247
OrthoDB:EOG4ZW8MT GeneTree:ENSGT00390000012424 EMBL:Y09265
EMBL:AY693203 PIR:S50662 RefSeq:NP_011089.4
ProteinModelPortal:P40096 SMR:P40096 DIP:DIP-2066N IntAct:P40096
MINT:MINT-528106 STRING:P40096 PaxDb:P40096 PeptideAtlas:P40096
EnsemblFungi:YER159C GeneID:856909 KEGG:sce:YER162C CYGD:YER159c
HOGENOM:HOG000166368 KO:K10838 NextBio:983333 Genevestigator:P40096
GermOnline:YER159C GO:GO:0017054 Uniprot:P40096
Length = 142
Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 14 RPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFL 54
+ FP +VKKI++ DEDI KV+ I RS E F+ L
Sbjct: 50 KTHFPPAKVKKIMQTDEDIGKVSQATPVIAGRSLEFFIALL 90
>UNIPROTKB|Q13952 [details] [associations]
symbol:NFYC "Nuclear transcription factor Y subunit gamma"
species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0016602 "CCAAT-binding factor
complex" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006457 "protein
folding" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_111217 InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027170 Pfam:PF00808 GO:GO:0045893 GO:GO:0006457
GO:GO:0003677 EMBL:CH471059 GO:GO:0043565 GO:GO:0003700
GO:GO:0006357 GO:GO:0006351 GO:GO:0003713 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG5208 GO:GO:0016602 EMBL:AC119677 PDB:1N1J
PDBsum:1N1J CTD:4802 HOGENOM:HOG000231074 HOVERGEN:HBG002885
KO:K08066 PANTHER:PTHR10252:SF14 EMBL:U62296 EMBL:U78774
EMBL:Z74792 EMBL:D85425 EMBL:D89986 EMBL:AF191744 EMBL:AK000346
EMBL:AK127677 EMBL:AK300774 EMBL:AK301385 EMBL:BT020081
EMBL:AL031289 EMBL:AL354914 EMBL:BC005003 IPI:IPI00071697
IPI:IPI00216407 IPI:IPI00514289 IPI:IPI00646320 IPI:IPI00911001
IPI:IPI00943050 RefSeq:NP_001136059.1 RefSeq:NP_001136060.1
RefSeq:NP_001136061.1 RefSeq:NP_001136062.1 RefSeq:NP_055038.2
UniGene:Hs.713051 ProteinModelPortal:Q13952 SMR:Q13952
IntAct:Q13952 MINT:MINT-249381 STRING:Q13952 PhosphoSite:Q13952
DMDM:20137773 PaxDb:Q13952 PRIDE:Q13952 DNASU:4802
Ensembl:ENST00000308733 Ensembl:ENST00000372651
Ensembl:ENST00000372652 Ensembl:ENST00000372653
Ensembl:ENST00000372654 Ensembl:ENST00000425457
Ensembl:ENST00000427410 Ensembl:ENST00000440226
Ensembl:ENST00000447388 GeneID:4802 KEGG:hsa:4802 UCSC:uc001cfy.4
UCSC:uc001cgb.3 UCSC:uc001cge.3 GeneCards:GC01P041159
HGNC:HGNC:7806 MIM:605344 neXtProt:NX_Q13952 PharmGKB:PA31611
InParanoid:Q13952 OMA:ATNAQQI PhylomeDB:Q13952 ChiTaRS:NFYC
EvolutionaryTrace:Q13952 GenomeRNAi:4802 NextBio:18510
ArrayExpress:Q13952 Bgee:Q13952 Genevestigator:Q13952
GermOnline:ENSG00000066136 Uniprot:Q13952
Length = 458
Score = 96 (38.9 bits), Expect = 0.00049, P = 0.00049
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 16 EFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLXXXXXXXXXXXXXXTIKLGDM 75
E P+ R+KKI+KLDED+ +++EA + +++ ++F+ L T++ D+
Sbjct: 42 ELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDI 101
Query: 76 RVA 78
+A
Sbjct: 102 AMA 104
>POMBASE|SPAC17G8.03c [details] [associations]
symbol:dpb3 "DNA polymerase epsilon interactor
Dpb3-like" species:4896 "Schizosaccharomyces pombe" [GO:0000785
"chromatin" evidence=NAS] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IC] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
PomBase:SPAC17G8.03c GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0043565 GO:GO:0000785 GO:GO:0006261
GO:GO:0043596 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0003887
EMBL:AB028008 PIR:T37855 RefSeq:NP_593726.1
ProteinModelPortal:Q10315 IntAct:Q10315 STRING:Q10315
EnsemblFungi:SPAC17G8.03c.1 GeneID:2542201 KEGG:spo:SPAC17G8.03c
eggNOG:COG5247 OMA:KDDESAT OrthoDB:EOG4ZW8MT NextBio:20803271
Uniprot:Q10315
Length = 199
Score = 90 (36.7 bits), Expect = 0.00049, P = 0.00049
Identities = 16/39 (41%), Positives = 27/39 (69%)
Query: 14 RPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLR 52
+ FPV R+KKI++ D+D+ KV I+S++ ELF++
Sbjct: 21 KSRFPVARIKKIMQADQDVGKVAQVTPVIMSKALELFMQ 59
>TAIR|locus:2101212 [details] [associations]
symbol:NF-YC11 ""nuclear factor Y, subunit C11""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 GO:GO:0005829
GO:GO:0005634 EMBL:CP002686 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AP002047 UniGene:At.16910
UniGene:At.48650 HSSP:Q13952 EMBL:AF462841 EMBL:AY143847
IPI:IPI00534587 RefSeq:NP_187854.2 ProteinModelPortal:Q9LHG0
SMR:Q9LHG0 IntAct:Q9LHG0 PRIDE:Q9LHG0 EnsemblPlants:AT3G12480.1
GeneID:820427 KEGG:ath:AT3G12480 TAIR:At3g12480 InParanoid:Q9LHG0
OMA:YEITLER PhylomeDB:Q9LHG0 ProtClustDB:CLSN2918076
Genevestigator:Q9LHG0 Uniprot:Q9LHG0
Length = 293
Score = 93 (37.8 bits), Expect = 0.00051, P = 0.00051
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 17 FPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFL 54
FP R+KKI++ DED+ K+ +VS+S ELFL+ L
Sbjct: 9 FPAARIKKIMQADEDVGKIALAVPVLVSKSLELFLQDL 46
>FB|FBgn0043001 [details] [associations]
symbol:Chrac-16 "Chromatin accessibility complex 16kD
protein" species:7227 "Drosophila melanogaster" [GO:0008623 "CHRAC"
evidence=IDA;NAS] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
EMBL:AE014298 GO:GO:0043565 GO:GO:0006974 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0008623 KO:K11656 eggNOG:NOG259822
GeneTree:ENSGT00510000048543 PDB:2BYK PDB:2BYM PDBsum:2BYK
PDBsum:2BYM EMBL:AY113515 EMBL:AJ271142 RefSeq:NP_572776.1
UniGene:Dm.20583 SMR:Q9V452 DIP:DIP-20460N IntAct:Q9V452
MINT:MINT-1579286 STRING:Q9V452 EnsemblMetazoa:FBtr0073642
GeneID:32166 KEGG:dme:Dmel_CG15736 UCSC:CG15736-RA CTD:32166
FlyBase:FBgn0043001 InParanoid:Q9V452 OMA:HLAREAY OrthoDB:EOG4MSBFS
EvolutionaryTrace:Q9V452 GenomeRNAi:32166 NextBio:777217
Uniprot:Q9V452
Length = 140
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 12 TTRPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFL 54
T P+ RV+ I+K D +T+E LF++++ TELF+R L
Sbjct: 15 TAETFLPLSRVRTIMKSSMDTGLITNEVLFLMTKCTELFVRHL 57
>ZFIN|ZDB-GENE-050522-309 [details] [associations]
symbol:zgc:110337 "zgc:110337" species:7955 "Danio
rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
ZFIN:ZDB-GENE-050522-309 GO:GO:0005634 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG5208 KO:K03506
HOGENOM:HOG000007271 HOVERGEN:HBG051399 OrthoDB:EOG4X6C9X
EMBL:BC095224 IPI:IPI00834136 RefSeq:NP_001018420.1
UniGene:Dr.88253 ProteinModelPortal:Q503Q5 STRING:Q503Q5
GeneID:553610 KEGG:dre:553610 InParanoid:Q503Q5 NextBio:20880347
ArrayExpress:Q503Q5 Uniprot:Q503Q5
Length = 179
Score = 88 (36.0 bits), Expect = 0.00062, P = 0.00062
Identities = 15/58 (25%), Positives = 32/58 (55%)
Query: 18 PVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLXXXXXXXXXXXXXXTIKLGDM 75
P+ R+K ++K D D+ + E++FI++++TELF+ + T++ D+
Sbjct: 52 PLSRIKTLMKADPDVTLASQESVFIIAKATELFVEMIAKDALVYAQQGKRKTLQRKDL 109
>UNIPROTKB|A6QQ14 [details] [associations]
symbol:POLE4 "DNA polymerase epsilon subunit 4"
species:9913 "Bos taurus" [GO:0008622 "epsilon DNA polymerase
complex" evidence=ISS] [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671
GO:GO:0043966 eggNOG:COG5208 GO:GO:0008622 GO:GO:0003887 KO:K03506
EMBL:BC149592 IPI:IPI00702694 RefSeq:NP_001094695.1 UniGene:Bt.9810
ProteinModelPortal:A6QQ14 STRING:A6QQ14 Ensembl:ENSBTAT00000047798
GeneID:613730 KEGG:bta:613730 CTD:56655
GeneTree:ENSGT00530000063560 HOGENOM:HOG000007271
HOVERGEN:HBG051399 InParanoid:A6QQ14 OMA:EKSERAT OrthoDB:EOG4X6C9X
NextBio:20898734 Uniprot:A6QQ14
Length = 116
Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 18 PVGRVKKIIKLDEDINKVTSEALFIVSRSTELFL 51
P+ RVK ++K D D+ EA+FI++R+ ELF+
Sbjct: 41 PLARVKALVKADPDVTLAGQEAIFILARAAELFV 74
>UNIPROTKB|Q9NR33 [details] [associations]
symbol:POLE4 "DNA polymerase epsilon subunit 4"
species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0008622 "epsilon DNA polymerase
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 GO:GO:0043565 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0043966 eggNOG:COG5208
GO:GO:0008622 GO:GO:0003887 KO:K03506 CTD:56655
HOGENOM:HOG000007271 HOVERGEN:HBG051399 OMA:EKSERAT
OrthoDB:EOG4X6C9X EMBL:AF261688 EMBL:AC007400 EMBL:BC031331
IPI:IPI00008436 RefSeq:NP_063949.2 UniGene:Hs.469060
ProteinModelPortal:Q9NR33 SMR:Q9NR33 IntAct:Q9NR33 STRING:Q9NR33
PhosphoSite:Q9NR33 DMDM:116241340 PaxDb:Q9NR33 PRIDE:Q9NR33
Ensembl:ENST00000483063 GeneID:56655 KEGG:hsa:56655 UCSC:uc002snf.3
GeneCards:GC02P075185 H-InvDB:HIX0002198 HGNC:HGNC:18755 MIM:607269
neXtProt:NX_Q9NR33 PharmGKB:PA38677 PhylomeDB:Q9NR33
GenomeRNAi:56655 NextBio:62121 Bgee:Q9NR33 CleanEx:HS_POLE4
Genevestigator:Q9NR33 GermOnline:ENSG00000115350 Uniprot:Q9NR33
Length = 117
Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 18 PVGRVKKIIKLDEDINKVTSEALFIVSRSTELFL 51
P+ RVK ++K D D+ EA+FI++R+ ELF+
Sbjct: 42 PLARVKALVKADPDVTLAGQEAIFILARAAELFV 75
>MGI|MGI:1914229 [details] [associations]
symbol:Pole4 "polymerase (DNA-directed), epsilon 4 (p12
subunit)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO] [GO:0008622 "epsilon DNA
polymerase complex" evidence=ISO] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 MGI:MGI:1914229
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671
GO:GO:0043966 eggNOG:COG5208 GO:GO:0008622 GO:GO:0003887 KO:K03506
CTD:56655 GeneTree:ENSGT00530000063560 HOGENOM:HOG000007271
HOVERGEN:HBG051399 OrthoDB:EOG4X6C9X EMBL:AK010135 EMBL:AK010300
EMBL:AK011595 EMBL:AK160582 EMBL:AK167631 EMBL:BC023189
IPI:IPI00131960 RefSeq:NP_080158.1 UniGene:Mm.195753
ProteinModelPortal:Q9CQ36 SMR:Q9CQ36 STRING:Q9CQ36
PhosphoSite:Q9CQ36 REPRODUCTION-2DPAGE:Q9CQ36 PaxDb:Q9CQ36
PRIDE:Q9CQ36 Ensembl:ENSMUST00000095786 GeneID:66979 KEGG:mmu:66979
UCSC:uc009clk.1 InParanoid:Q9CQ36 ChiTaRS:POLE4 NextBio:323206
Bgee:Q9CQ36 Genevestigator:Q9CQ36 GermOnline:ENSMUSG00000030042
Uniprot:Q9CQ36
Length = 118
Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 18 PVGRVKKIIKLDEDINKVTSEALFIVSRSTELFL 51
P+ RVK ++K D D+ EA+FI++R+ ELF+
Sbjct: 43 PLARVKALVKADPDVTLAGQEAIFILARAAELFV 76
>RGD|1307793 [details] [associations]
symbol:Pole4 "polymerase (DNA-directed), epsilon 4, accessory
subunit" species:10116 "Rattus norvegicus" [GO:0005622
"intracellular" evidence=IEA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=ISO] [GO:0008622 "epsilon
DNA polymerase complex" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043966 "histone
H3 acetylation" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 RGD:1307793 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671 EMBL:CH473957
GO:GO:0043966 KO:K03506 CTD:56655 GeneTree:ENSGT00530000063560
OrthoDB:EOG4X6C9X IPI:IPI00947739 RefSeq:NP_001102104.1
UniGene:Rn.161846 Ensembl:ENSRNOT00000067314 GeneID:362385
KEGG:rno:362385 UCSC:RGD:1307793 NextBio:679740 Uniprot:D3Z9P5
Length = 118
Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 18 PVGRVKKIIKLDEDINKVTSEALFIVSRSTELFL 51
P+ RVK ++K D D+ EA+FI++R+ ELF+
Sbjct: 43 PLARVKALVKADPDVTLAGQEAIFILARAAELFV 76
>TAIR|locus:2159702 [details] [associations]
symbol:NF-YC7 ""nuclear factor Y, subunit C7""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113
eggNOG:COG5208 HOGENOM:HOG000200436 EMBL:AB025619 EMBL:DQ056712
IPI:IPI00534189 RefSeq:NP_199858.1 UniGene:At.62438
ProteinModelPortal:Q9FGP8 SMR:Q9FGP8 IntAct:Q9FGP8 STRING:Q9FGP8
EnsemblPlants:AT5G50470.1 GeneID:835115 KEGG:ath:AT5G50470
GeneFarm:5147 TAIR:At5g50470 InParanoid:Q9FGP8 OMA:ISKACEM
PhylomeDB:Q9FGP8 ProtClustDB:CLSN2916677 ArrayExpress:Q9FGP8
Genevestigator:Q9FGP8 GermOnline:AT5G50470 Uniprot:Q9FGP8
Length = 212
Score = 89 (36.4 bits), Expect = 0.00075, P = 0.00075
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 10 TETTRPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLXXXXXXXXXXXXXXT 69
T+ FP+ R+KKI+K + ++N VT+EA ++S++ E+ + L T
Sbjct: 57 TDVKHHAFPLTRIKKIMKSNPEVNMVTAEAPVLISKACEMLILDLTMRSWLHTVEGGRQT 116
Query: 70 IKLGD 74
+K D
Sbjct: 117 LKRSD 121
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.357 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 78 64 0.00091 102 3 10 22 0.40 28
29 0.44 28
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 48
No. of states in DFA: 427 (46 KB)
Total size of DFA: 84 KB (2068 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.06u 0.13s 10.19t Elapsed: 00:00:00
Total cpu time: 10.06u 0.13s 10.19t Elapsed: 00:00:00
Start: Thu May 9 22:13:30 2013 End: Thu May 9 22:13:30 2013